Citrus Sinensis ID: 018669

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350--
MPSSPKFFYARSAASPSPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQQESCSKSPTMVSDD
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHEEEEEEEcccccccccccccccEEEEcccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHcccccccccccHHccccEEEEEEEEccccHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHccccEEEEEEccccEEcHHHHHHHHHHccccccEEEEEEEcccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHccccccccccHHHHHHHHHHccccEEEccccccccccccEEEEEccccccccccHHHHHHHccccccccccccccccc
ccccccccccccccccccccHHHHHHHHHHHHHHcHHHEEEEEEccccccccccccccEEEEEEEcccccccccccHHcccccccccccccccEEEEEEEEcccccHHHHHHHHHHHccccHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEccccccccccccEEEEcccccccccccccccccEEEEcHHHHHHHHHHcHHHHHHHHHHHcHHHHHHHccccEEccccccccccccccEEEEEccccccccccHHHHHHHHcccHHccccccccccc
mpsspkffyarsaaspsprkstVLIFSCLIIGIAGFVLGISAFLYagrgahrcsnfnptSVRVVWdnhgegsngisgsqdddnnnnnnikrhkvMGFVGiqtgfgsggrrrslrmtwmpsdhqGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEeysklpyktLAFFKAAYALYdsefyvkadddiylrpdRLSLLLakerphsqtylgcmkkgpvftdphlkwyepqsyllgkeyflhaygplyaLSADVVVSLVALKnnsfrmfsnedvTIGSWMLAMnvnhednrelcqsdctssfiavwdipkcsglcnpeKRLLELHqqescsksptmvsdd
mpsspkffyarsaaspsprkSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGsngisgsqdddnnNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKerphsqtylgcmkkgpvftdpHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLelhqqescsksptmvsdd
MPSSPKFFYarsaaspsprKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEgsngisgsqdddnnnnnniKRHKVMGFVGIQTgfgsggrrrslrMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPlyalsadvvvslvalKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQQESCSKSPTMVSDD
*********************TVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDN**************************VMGFVGIQTGFGS*******RMTWM******LQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEK*********************
****************SPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPT*V********************************VMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQQESCS*********
*******************KSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQ**************
****************SPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQQ*SC**SP******
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPSSPKFFYARSAASPSPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQQESCSKSPTMVSDD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query352 2.2.26 [Sep-21-2011]
Q8L7M1345 Probable beta-1,3-galacto yes no 0.968 0.988 0.707 1e-147
Q9LKA9343 Probable beta-1,3-galacto no no 0.963 0.988 0.709 1e-144
Q66GS2371 Probable beta-1,3-galacto no no 0.917 0.870 0.605 1e-112
Q9SAA4384 Probable beta-1,3-galacto no no 0.707 0.648 0.354 2e-43
A8MRC7407 Probable beta-1,3-galacto no no 0.715 0.619 0.339 2e-42
Q8LEJ9407 Probable beta-1,3-galacto no no 0.727 0.628 0.352 7e-42
Q9MAP8399 Probable beta-1,3-galacto no no 0.687 0.606 0.344 8e-42
Q9LM60398 Probable beta-1,3-galacto no no 0.704 0.623 0.366 2e-41
Q9C809395 Probable beta-1,3-galacto no no 0.730 0.650 0.338 4e-41
Q6NQB7393 Beta-1,3-galactosyltransf no no 0.710 0.636 0.342 4e-40
>sp|Q8L7M1|B3GTE_ARATH Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana GN=B3GALT14 PE=2 SV=1 Back     alignment and function desciption
 Score =  522 bits (1345), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/355 (70%), Positives = 293/355 (82%), Gaps = 14/355 (3%)

Query: 1   MPSSPKFFYARSAASPSPRKSTVLIFSCLIIGIAGFVLGISAFLYAG---RGAHRCSNFN 57
           M S  K F+ARS+ + + R + +++ + L IGIAGF  G++  L  G    G +  +N  
Sbjct: 1   MHSPRKLFHARSSLA-TRRSTALVVLTSLAIGIAGFTFGLAVILIPGLRLTGRNCLTNTP 59

Query: 58  PTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTW 117
           P +VRVVWD  G  +  +SG +          KRHKVMGFVGIQTGFGS GRRRSLR TW
Sbjct: 60  PKTVRVVWDVAGNSNGVVSGEK----------KRHKVMGFVGIQTGFGSAGRRRSLRKTW 109

Query: 118 MPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYK 177
           MPSD +GL++LEE+TGLA RF+IG+T  + KMA+LR+E+AEYDDF+LLDIEEEYSKLPYK
Sbjct: 110 MPSDPEGLRRLEESTGLAIRFMIGKTKSEEKMAQLRREIAEYDDFVLLDIEEEYSKLPYK 169

Query: 178 TLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHL 237
           TLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKER HSQTYLGC+KKGPVFTDP L
Sbjct: 170 TLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERSHSQTYLGCLKKGPVFTDPKL 229

Query: 238 KWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNV 297
           KWYEP S+LLGKEYFLHAYGP+YALSADVV SLVALKNNSFRMF+NEDVTIG+WMLAMNV
Sbjct: 230 KWYEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGAWMLAMNV 289

Query: 298 NHEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQQESCSKSPTMVSDD 352
           NHE++  LC+ +C+ S +AVWDIPKCSGLCNPEKR+LELH+QESCSKSPT+ SDD
Sbjct: 290 NHENHHILCEPECSPSSVAVWDIPKCSGLCNPEKRMLELHKQESCSKSPTLPSDD 344
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9LKA9|B3GTD_ARATH Probable beta-1,3-galactosyltransferase 13 OS=Arabidopsis thaliana GN=B3GALT13 PE=2 SV=1 Back     alignment and function description
>sp|Q66GS2|B3GTC_ARATH Probable beta-1,3-galactosyltransferase 12 OS=Arabidopsis thaliana GN=B3GALT12 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2 Back     alignment and function description
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1 Back     alignment and function description
>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1 Back     alignment and function description
>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1 Back     alignment and function description
>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1 Back     alignment and function description
>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query352
224121586351 predicted protein [Populus trichocarpa] 0.991 0.994 0.759 1e-156
225461642348 PREDICTED: probable beta-1,3-galactosylt 0.985 0.997 0.753 1e-149
30695469345 putative beta-1,3-galactosyltransferase 0.968 0.988 0.707 1e-146
224117060326 predicted protein [Populus trichocarpa] 0.914 0.987 0.772 1e-144
297847718349 galactosyltransferase family protein [Ar 0.968 0.977 0.701 1e-143
297834360343 galactosyltransferase family protein [Ar 0.963 0.988 0.701 1e-143
15232447343 putative beta-1,3-galactosyltransferase 0.963 0.988 0.709 1e-143
356517060338 PREDICTED: probable beta-1,3-galactosylt 0.957 0.997 0.727 1e-142
356577379338 PREDICTED: probable beta-1,3-galactosylt 0.957 0.997 0.732 1e-142
356549673336 PREDICTED: probable beta-1,3-galactosylt 0.954 1.0 0.718 1e-142
>gi|224121586|ref|XP_002330737.1| predicted protein [Populus trichocarpa] gi|222872513|gb|EEF09644.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 269/354 (75%), Positives = 302/354 (85%), Gaps = 5/354 (1%)

Query: 1   MPSSPKFFYARSAASPSPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRC-SNFNPT 59
           MPSSPKFF++R +   + R+STVLI SCL+IGI+GF+ G+++FL      +RC +N  P 
Sbjct: 1   MPSSPKFFHSRLSQPSNSRRSTVLILSCLLIGISGFIFGLTSFLTCSH-TYRCFNNSPPR 59

Query: 60  SVRVVW-DNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWM 118
           SVRVVW  N     NG+  +   D       +R KVMGFVGIQTGFGS GRRRSLR TWM
Sbjct: 60  SVRVVWGTNSNMNDNGVGNAVLLDGEERR--ERQKVMGFVGIQTGFGSSGRRRSLRKTWM 117

Query: 119 PSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKT 178
           PSD QGLQ+LEE+TGLAFRF+IGRTND+SKMAEL++E+AEYDDF+LLDIEE+YS+LPYKT
Sbjct: 118 PSDRQGLQRLEESTGLAFRFVIGRTNDKSKMAELKREIAEYDDFLLLDIEEQYSQLPYKT 177

Query: 179 LAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLK 238
           LAFFKAAYAL+DSEFYVKADDDIYLRPDRLS LLAKER HSQTYLGC+KKGPVFTDP LK
Sbjct: 178 LAFFKAAYALFDSEFYVKADDDIYLRPDRLSTLLAKERAHSQTYLGCLKKGPVFTDPKLK 237

Query: 239 WYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVN 298
           WYEP SYLLGKEYFLHAYGP+YALSADVV SLVAL+NNSFRMFSNEDVTIG+W+LAMNVN
Sbjct: 238 WYEPLSYLLGKEYFLHAYGPIYALSADVVASLVALRNNSFRMFSNEDVTIGAWILAMNVN 297

Query: 299 HEDNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQQESCSKSPTMVSDD 352
           HEDNR LC  +CT S IAVWDIPKCSGLCNPE RLLELHQQESCSKSPTM SDD
Sbjct: 298 HEDNRALCSPECTPSSIAVWDIPKCSGLCNPEARLLELHQQESCSKSPTMESDD 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225461642|ref|XP_002283081.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|30695469|ref|NP_175736.2| putative beta-1,3-galactosyltransferase 14 [Arabidopsis thaliana] gi|75154190|sp|Q8L7M1.1|B3GTE_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 14 gi|22135994|gb|AAM91579.1| unknown protein [Arabidopsis thaliana] gi|31711828|gb|AAP68270.1| At1g53290 [Arabidopsis thaliana] gi|332194798|gb|AEE32919.1| putative beta-1,3-galactosyltransferase 14 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224117060|ref|XP_002317466.1| predicted protein [Populus trichocarpa] gi|222860531|gb|EEE98078.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297847718|ref|XP_002891740.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297337582|gb|EFH67999.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297834360|ref|XP_002885062.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330902|gb|EFH61321.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15232447|ref|NP_188114.1| putative beta-1,3-galactosyltransferase 13 [Arabidopsis thaliana] gi|75273746|sp|Q9LKA9.1|B3GTD_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 13 gi|8777479|dbj|BAA97059.1| unnamed protein product [Arabidopsis thaliana] gi|17979337|gb|AAL49894.1| putative galactosyltransferase [Arabidopsis thaliana] gi|22136686|gb|AAM91662.1| putative galactosyltransferase [Arabidopsis thaliana] gi|332642073|gb|AEE75594.1| putative beta-1,3-galactosyltransferase 13 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356517060|ref|XP_003527208.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Glycine max] Back     alignment and taxonomy information
>gi|356577379|ref|XP_003556804.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Glycine max] Back     alignment and taxonomy information
>gi|356549673|ref|XP_003543216.1| PREDICTED: probable beta-1,3-galactosyltransferase 13-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query352
TAIR|locus:2009665345 AT1G53290 [Arabidopsis thalian 0.963 0.982 0.622 1.5e-115
TAIR|locus:2086370343 AT3G14960 [Arabidopsis thalian 0.960 0.985 0.646 6.4e-115
TAIR|locus:2057442371 AT2G26100 [Arabidopsis thalian 0.906 0.859 0.548 9e-93
TAIR|locus:505006138398 DD46 [Arabidopsis thaliana (ta 0.724 0.640 0.338 1.9e-35
TAIR|locus:2116452407 AT4G26940 [Arabidopsis thalian 0.698 0.604 0.316 3.1e-35
TAIR|locus:2027352384 AT1G11730 [Arabidopsis thalian 0.701 0.643 0.321 3.6e-34
TAIR|locus:2038031399 AT1G32930 [Arabidopsis thalian 0.687 0.606 0.323 3.2e-33
TAIR|locus:2062545409 AT2G32430 [Arabidopsis thalian 0.701 0.603 0.323 3.2e-33
TAIR|locus:2207225407 AT1G05170 [Arabidopsis thalian 0.704 0.609 0.296 2.3e-32
TAIR|locus:2029471393 AT1G77810 [Arabidopsis thalian 0.710 0.636 0.311 1.3e-31
TAIR|locus:2009665 AT1G53290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
 Identities = 219/352 (62%), Positives = 255/352 (72%)

Query:     4 SPKFFYXXXXXXXXXXKSTVLIFSCLIIGIAGFVLGISAFLYAG---RGAHRCSNFNPTS 60
             SP+  +           + +++ + L IGIAGF  G++  L  G    G +  +N  P +
Sbjct:     3 SPRKLFHARSSLATRRSTALVVLTSLAIGIAGFTFGLAVILIPGLRLTGRNCLTNTPPKT 62

Query:    61 VRVVWDNHGEXXXXXXXXXXXXXXXXXXXKRHKVMGFVGIQTXXXXXXXXXXXXMTWMPS 120
             VRVVWD  G                    KRHKVMGFVGIQT             TWMPS
Sbjct:    63 VRVVWDVAGNSNGVVSGEK----------KRHKVMGFVGIQTGFGSAGRRRSLRKTWMPS 112

Query:   121 DHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLA 180
             D +GL++LEE+TGLA RF+IG+T  + KMA+LR+E+AEYDDF+LLDIEEEYSKLPYKTLA
Sbjct:   113 DPEGLRRLEESTGLAIRFMIGKTKSEEKMAQLRREIAEYDDFVLLDIEEEYSKLPYKTLA 172

Query:   181 FFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWY 240
             FFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKER HSQTYLGC+KKGPVFTDP LKWY
Sbjct:   173 FFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERSHSQTYLGCLKKGPVFTDPKLKWY 232

Query:   241 EPQSYLLGKEYFLHAYGPXXXXXXXXXXXXXXXKNNSFRMFSNEDVTIGSWMLAMNVNHE 300
             EP S+LLGKEYFLHAYGP               KNNSFRMF+NEDVTIG+WMLAMNVNHE
Sbjct:   233 EPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGAWMLAMNVNHE 292

Query:   301 DNRELCQSDCTSSFIAVWDIPKCSGLCNPEKRLLELHQQESCSKSPTMVSDD 352
             ++  LC+ +C+ S +AVWDIPKCSGLCNPEKR+LELH+QESCSKSPT+ SDD
Sbjct:   293 NHHILCEPECSPSSVAVWDIPKCSGLCNPEKRMLELHKQESCSKSPTLPSDD 344
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
TAIR|locus:2086370 AT3G14960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057442 AT2G26100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LKA9B3GTD_ARATH2, ., 4, ., 1, ., -0.70980.96300.9883nono
Q8L7M1B3GTE_ARATH2, ., 4, ., 1, ., -0.70700.96870.9884yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.79LOW CONFIDENCE prediction!
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.146.44.1
hypothetical protein (326 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query352
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 7e-53
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 3e-48
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 2e-11
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  179 bits (455), Expect = 7e-53
 Identities = 102/285 (35%), Positives = 161/285 (56%), Gaps = 28/285 (9%)

Query: 75  ISGS--QDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEAT 132
           ++GS   +D     ++ KR  +M  VGI T F S  RR S+R TWMP   +  ++LEE  
Sbjct: 119 LNGSPISEDLKKTQSSGKRRYLM-VVGINTAFSSRKRRDSVRATWMPQGEK-RKKLEEEK 176

Query: 133 GLAFRFIIGRTN------DQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAY 186
           G+  RF+IG +       D++  AE RK    + DF+ LD  E Y +L  KT  +F  A 
Sbjct: 177 GIIIRFVIGHSATSGGILDRAIEAEDRK----HGDFLRLDHVEGYLELSAKTKTYFATAV 232

Query: 187 ALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYL 246
           A++D++FYVK DDD+++    L   L + R   + Y+GCMK GPV +   ++++EP+ + 
Sbjct: 233 AMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWK 292

Query: 247 LGKE---YFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNR 303
            G+    YF HA G LYA+S D + S +++  +    ++NEDV++GSW + ++V H D+R
Sbjct: 293 FGENGNKYFRHATGQLYAISKD-LASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDR 351

Query: 304 ELC---QSDCT------SSFIAVWDIPKCSGLCNPEKRLLELHQQ 339
            LC     DC       +  +A +D   CSG+C    R+ E+H++
Sbjct: 352 RLCCGTPPDCEWKAQAGNICVASFDW-SCSGICRSADRIKEVHRR 395

Length = 408
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 352
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.86
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.76
PLN03153 537 hypothetical protein; Provisional 99.48
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.65
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 96.08
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 95.89
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 95.87
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 95.59
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 94.94
PRK11204 420 N-glycosyltransferase; Provisional 94.9
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 94.63
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 94.58
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 93.82
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 93.78
PF04646 255 DUF604: Protein of unknown function, DUF604; Inter 93.48
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 93.22
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 92.92
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 92.58
PRK14583 444 hmsR N-glycosyltransferase; Provisional 91.89
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 91.64
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 91.63
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 91.04
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 90.51
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 90.4
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 90.38
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 90.17
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 90.08
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 89.56
cd06423180 CESA_like CESA_like is the cellulose synthase supe 89.21
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 88.72
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 88.11
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 87.55
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 87.14
COG1215 439 Glycosyltransferases, probably involved in cell wa 85.74
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 84.71
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 84.51
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 84.02
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 83.65
cd06438183 EpsO_like EpsO protein participates in the methano 82.81
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 82.28
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.4e-60  Score=461.71  Aligned_cols=252  Identities=37%  Similarity=0.700  Sum_probs=220.9

Q ss_pred             CCCCCCCeeEEEEEeCCCCCHHHHHHHHHHhcCCCccchhhhhccCCeEEEEEeecCC--ChHHHHHHHHHHhhCCCEEE
Q 018669           87 NNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTN--DQSKMAELRKEVAEYDDFIL  164 (352)
Q Consensus        87 ~~~~~~~~~lli~V~S~~~~~~rR~aIR~TW~~~~~~~l~~l~~~~~v~~~FvlG~~~--~~~~~~~l~~E~~~y~DIl~  164 (352)
                      +...+++++++|+|+|+++|++||++||+|||+.... +.+++...+++++|++|++.  +...+.+|++|+++|||||+
T Consensus       132 ~~~~~~~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~-~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~  210 (408)
T PLN03193        132 QSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEK-RKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLR  210 (408)
T ss_pred             CCCCcceEEEEEEEeCCCCCHHHHHHHHHHHcCCccc-ccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEE
Confidence            3455778999999999999999999999999997532 33444567899999999987  45788999999999999999


Q ss_pred             ecccccCCCcchHHHHHHHhhhhcCCcceEEEeCCceeeChHHHHHHHhhcCCCCCcEEEEecCCccccCCCCCcccccc
Q 018669          165 LDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQS  244 (352)
Q Consensus       165 ~d~~D~y~nLt~Ktl~~l~w~~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~~~pv~rd~~~Kwyv~~~  244 (352)
                      +||.|+|.|||+||+++|+|+.++++++||||+|||+|||+++|+.+|+.....+++|+|+++.+|+ |++.++||.+++
T Consensus       211 lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPv-r~~~~~ky~epe  289 (408)
T PLN03193        211 LDHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPV-LSQKGVRYHEPE  289 (408)
T ss_pred             EecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCcc-ccCCCCcCcCcc
Confidence            9999999999999999999999999999999999999999999999998776666799999988898 665555555445


Q ss_pred             cc----CCCCCCCCCcCCeeeecHHHHHHHHHhhCcCCCCCCcchHHHHHHHHhCCCcEeeCCcccc---cCCCCC----
Q 018669          245 YL----LGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQ---SDCTSS----  313 (352)
Q Consensus       245 ~y----~~~~yP~y~~G~gYvlS~~lv~~l~~~~~~~~~~~~~EDv~iG~~l~~lgV~~~~~~~f~~---~~c~~~----  313 (352)
                      +|    +++.|||||+|+|||||+|+|+.|+.. ...++.+.+|||++|+||..++|+++|+++||+   +.|+..    
T Consensus       290 ~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n-~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~  368 (408)
T PLN03193        290 YWKFGENGNKYFRHATGQLYAISKDLASYISIN-QHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAG  368 (408)
T ss_pred             cccccCccccCCCCCCcceEEehHHHHHHHHhC-hhhhcccCcchhhhhhHhccCCceeeecccccCCCCccccccccCC
Confidence            55    679999999999999999999999865 468889999999999999999999999999997   679743    


Q ss_pred             --eEEEeccCCCCCCCchhHHhhhccccccccC
Q 018669          314 --FIAVWDIPKCSGLCNPEKRLLELHQQESCSK  344 (352)
Q Consensus       314 --~~~~~~~~~~~~~c~~~~~l~~~h~~~~c~~  344 (352)
                        -+++|++ +|++.|.+..+|.++|+  .|.+
T Consensus       369 ~~c~~~~~~-~csg~c~~~~~~~~~h~--~c~~  398 (408)
T PLN03193        369 NICVASFDW-SCSGICRSADRIKEVHR--RCGE  398 (408)
T ss_pred             CeeEEEecc-cCcccCCHHHHHHHHHH--hcCC
Confidence              3899999 89999999999999995  4644

>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query352
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure
 Score = 45.1 bits (106), Expect = 1e-05
 Identities = 24/150 (16%), Positives = 48/150 (32%), Gaps = 10/150 (6%)

Query: 151 ELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSL 210
            L++ +  +        E  +  L  K  A F A        ++   DDD Y+ P  L  
Sbjct: 55  RLQERLGPHLVVTQCSAEHSHPALSCKMAAEFDAFLV-SGLRWFCHVDDDNYVNPKALLQ 113

Query: 211 LLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSL 270
           LL         Y+G            L+  +         ++    G  + ++  + + +
Sbjct: 114 LLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKL---VRFWFATGGAGFCINRQLALKM 170

Query: 271 V------ALKNNSFRMFSNEDVTIGSWMLA 294
           V         + S  +   +D T+G  +  
Sbjct: 171 VPWASGSHFVDTSALIRLPDDCTVGYIIEC 200
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query352
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.94
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 94.66
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 94.01
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 93.79
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 93.6
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 92.93
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 92.14
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 85.46
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 83.13
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=99.94  E-value=8.5e-27  Score=220.74  Aligned_cols=191  Identities=17%  Similarity=0.238  Sum_probs=131.5

Q ss_pred             CeeEEEEEeCCCC-CHHHHHHHHHHhcCCCccchhhhhccCCeEEEEEeecCCChHHHHHHHHHHhhCCCEEEecccc--
Q 018669           93 KVMGFVGIQTGFG-SGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEE--  169 (352)
Q Consensus        93 ~~~lli~V~S~~~-~~~rR~aIR~TW~~~~~~~l~~l~~~~~v~~~FvlG~~~~~~~~~~l~~E~~~y~DIl~~d~~D--  169 (352)
                      .-+|+|+|+|+++ +.+|+++||+||++.++.           . .|+.+...++..    ...  ..+++++.++.+  
T Consensus        12 ~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-----------~-~fifsd~~d~~l----~~~--~~~~~~~~~~~~~~   73 (280)
T 2j0a_A           12 LGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-----------Q-TFIFTDSPDERL----QER--LGPHLVVTQCSAEH   73 (280)
T ss_dssp             GGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-----------G-EEEEESSCCHHH----HHH--HGGGEEECCC----
T ss_pred             cccEEEEEECcHHHHHHHHHHHHHHHhccCCC-----------c-eEEEcCCCcccc----ccc--ccccceeccccccc
Confidence            4568899999998 567889999999987531           1 344454444432    222  245788877754  


Q ss_pred             cCCCcchHHHHHHHhhhhcCCcceEEEeCCceeeChHHHHHHHhhcCCCCCcEEEEec-CCccccCCCCCccccccccCC
Q 018669          170 EYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMK-KGPVFTDPHLKWYEPQSYLLG  248 (352)
Q Consensus       170 ~y~nLt~Ktl~~l~w~~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~-~~pv~rd~~~Kwyv~~~~y~~  248 (352)
                      ++.+++.|+...+++.. +++++|++|+|||+||+++||+++|...++.+++|+|+.. ..|+ +   .++++|.+.++.
T Consensus        74 ~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~-~---~~~~~~~~~~~~  148 (280)
T 2j0a_A           74 SHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPI-H---ASELQSKQRTKL  148 (280)
T ss_dssp             ---CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC---------------------
T ss_pred             cccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccc-c---ccccCccccccc
Confidence            67889999999988653 3699999999999999999999999999899999999964 3444 3   245555544444


Q ss_pred             CCCCCCC-cCCeeeecHHHHHHHHHhhCcC------CCCCCcchHHHHHHHH-hCCCcEeeCCcccc
Q 018669          249 KEYFLHA-YGPLYALSADVVVSLVALKNNS------FRMFSNEDVTIGSWML-AMNVNHEDNRELCQ  307 (352)
Q Consensus       249 ~~yP~y~-~G~gYvlS~~lv~~l~~~~~~~------~~~~~~EDv~iG~~l~-~lgV~~~~~~~f~~  307 (352)
                      ..|+ || +|+|||||++++++|+......      ......||+++|.|++ ++||.+.+.+.|.+
T Consensus       149 ~~~~-y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~  214 (280)
T 2j0a_A          149 VRFW-FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHS  214 (280)
T ss_dssp             --CC-EECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCC
T ss_pred             cccC-cccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccC
Confidence            4554 66 6789999999999998743111      1234579999999998 99999999999986
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query352
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 89.46
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 81.72
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.46  E-value=1.7  Score=37.75  Aligned_cols=161  Identities=13%  Similarity=0.126  Sum_probs=85.6

Q ss_pred             EEEEEeecCCChHHHHHHHHHHhhCCC-EEEecccccCCCcchHHHHHHHhhhhcCCcceEEEeCCceeeChHHHHHHHh
Q 018669          135 AFRFIIGRTNDQSKMAELRKEVAEYDD-FILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLA  213 (352)
Q Consensus       135 ~~~FvlG~~~~~~~~~~l~~E~~~y~D-Il~~d~~D~y~nLt~Ktl~~l~w~~~~~~~~fvlK~DDD~fVn~~~L~~~L~  213 (352)
                      .++.|-..+.+......+++-.+++.+ |..+...++ ...    -.+...+......+|++.+|+|+.+.++.|..++.
T Consensus        56 EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n-~G~----~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~  130 (328)
T d1xhba2          56 EIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-SGL----IRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLA  130 (328)
T ss_dssp             EEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-CCH----HHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHH
T ss_pred             EEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEeccc-ccc----hHHHHHHHHhhhcceeeecCcccccChhHHHHHHH
Confidence            455565555555444445554555555 433333322 111    22445555556889999999999999888777665


Q ss_pred             hcC-CCCCcEEEEe---cC--------CccccC-----CCCCcc-ccccc-------cCCCCCCCCCcCCeeeecHHHHH
Q 018669          214 KER-PHSQTYLGCM---KK--------GPVFTD-----PHLKWY-EPQSY-------LLGKEYFLHAYGPLYALSADVVV  268 (352)
Q Consensus       214 ~~~-~~~~~y~G~~---~~--------~pv~rd-----~~~Kwy-v~~~~-------y~~~~yP~y~~G~gYvlS~~lv~  268 (352)
                      ... ....+.+|.+   ..        .+..+.     ....|. .+...       +.....-+++.|+++++++++..
T Consensus       131 ~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~  210 (328)
T d1xhba2         131 RIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQ  210 (328)
T ss_dssp             HHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHH
T ss_pred             HHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHHHH
Confidence            432 1122222222   00        000000     000111 11100       01112235678999999999999


Q ss_pred             HHHHhhCcCCCCCCcchHHHHHHHHhCCCcEee
Q 018669          269 SLVALKNNSFRMFSNEDVTIGSWMLAMNVNHED  301 (352)
Q Consensus       269 ~l~~~~~~~~~~~~~EDv~iG~~l~~lgV~~~~  301 (352)
                      .+-.. .........||+-++.=+.+.|-+..-
T Consensus       211 ~vGgf-De~~~~~g~ED~Dl~~R~~~~G~~i~~  242 (328)
T d1xhba2         211 EIGTY-DAGMDIWGGENLEISFRIWQCGGTLEI  242 (328)
T ss_dssp             HTTSC-CTTSCTTCCCCSHHHHHHHHTTCEEEE
T ss_pred             HhCCC-CCCCcCcCchHHHHHHHHHHhCCeEEE
Confidence            87433 233444457999999878887755444
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure