BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018671
(352 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357490831|ref|XP_003615703.1| hypothetical protein MTR_5g071250 [Medicago truncatula]
gi|355517038|gb|AES98661.1| hypothetical protein MTR_5g071250 [Medicago truncatula]
Length = 566
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 294/348 (84%), Positives = 326/348 (93%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V CETVT+ +TL+PWKF ISYDKLVIALGA+ +TFGIHGV E+A FLREV+HAQEIRR
Sbjct: 151 EVQCETVTEGTQTLDPWKFTISYDKLVIALGAQPTTFGIHGVYEHAIFLREVYHAQEIRR 210
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLM+SDVPGISEEEK RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY+HVKDYI
Sbjct: 211 KLLLNLMMSDVPGISEEEKKRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYAHVKDYI 270
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFDDRLRHYAT QL+KSGVRLVRGIVKDV +K+ILNDGTEVPYGLLV
Sbjct: 271 HVTLIEANEILSSFDDRLRHYATNQLTKSGVRLVRGIVKDVQEKKIILNDGTEVPYGLLV 330
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS + SLDLPKSPGGRIGIDEWLRVPSVQD+F++GDCSG++ESTGK LPALA
Sbjct: 331 WSTGVGPSPFIHSLDLPKSPGGRIGIDEWLRVPSVQDIFSIGDCSGFVESTGKPTLPALA 390
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGKYL +LLN++G+A GGRANS KD++LG+ FVY+HLGSMAT+G YKALVDLRQN
Sbjct: 391 QVAERQGKYLAALLNKVGEANGGRANSMKDIDLGNQFVYKHLGSMATVGSYKALVDLRQN 450
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
K++KGLSLAGFLSW VWRSAYLTRV+SWRNRFYVA+NWATTFVFGRDI
Sbjct: 451 KDAKGLSLAGFLSWFVWRSAYLTRVISWRNRFYVAINWATTFVFGRDI 498
>gi|449450824|ref|XP_004143162.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
[Cucumis sativus]
gi|449523139|ref|XP_004168582.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
[Cucumis sativus]
Length = 505
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 296/350 (84%), Positives = 326/350 (93%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V CETVTD TLEPW+FK+SYDKL+IALG++ TFGIHGVKE+A FLREV+HAQEIRRK
Sbjct: 156 VQCETVTDGSNTLEPWRFKLSYDKLIIALGSQPLTFGIHGVKEHAIFLREVYHAQEIRRK 215
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPGIS EEK RLLHCVVVGGGPTGVEFSGELSDFI++DV QRYSHVKDYI
Sbjct: 216 LLLNLMLSDVPGISVEEKRRLLHCVVVGGGPTGVEFSGELSDFIIKDVTQRYSHVKDYIQ 275
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRLRHYAT QL+KSGV+LVRGIVKDV Q +ILNDG+EVPYGLLVW
Sbjct: 276 VTLIEANEILSSFDDRLRHYATKQLTKSGVQLVRGIVKDVKPQSIILNDGSEVPYGLLVW 335
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS V SL++PKSPGGRIGIDEWLRVP+V+DVFA+GDCSG+LESTGK VLPALAQ
Sbjct: 336 STGVGPSPFVNSLEVPKSPGGRIGIDEWLRVPAVEDVFAIGDCSGFLESTGKQVLPALAQ 395
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL +LLN+IGK GGGRA S K++ELGDPFVY+HLGSMATIGRYKALVDLRQ+K
Sbjct: 396 VAERQGKYLAALLNKIGKEGGGRAGSGKNLELGDPFVYKHLGSMATIGRYKALVDLRQSK 455
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E+KG+S+AGFLSW VWRSAYLTRV+SWRNRFYVAVNWATTF+FGRDISRI
Sbjct: 456 EAKGISMAGFLSWFVWRSAYLTRVISWRNRFYVAVNWATTFIFGRDISRI 505
>gi|118488127|gb|ABK95883.1| unknown [Populus trichocarpa]
Length = 488
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/350 (85%), Positives = 324/350 (92%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHCETVTD L T++PW+FKISYDKL+IALGAEA TFGIHGVKE+A FLREV HAQEIRRK
Sbjct: 139 VHCETVTDGLDTVDPWRFKISYDKLIIALGAEALTFGIHGVKEHAIFLREVRHAQEIRRK 198
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSD+PG+SEEEKSRLLHCVVVGGGPTGVEFSGELSDFI++DVRQ YSHVKDYIH
Sbjct: 199 LLLNLMLSDMPGLSEEEKSRLLHCVVVGGGPTGVEFSGELSDFILKDVRQTYSHVKDYIH 258
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDD LR YAT QL+KSGV LVRGIVKDV QKLIL DGTEVPYGLLVW
Sbjct: 259 VTLIEANEILSSFDDSLRRYATKQLTKSGVHLVRGIVKDVKPQKLILTDGTEVPYGLLVW 318
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS+ VKSL+L KSPGGRIGIDEWLRVPSV DVFA+GDCSG+LESTGK VLPALAQ
Sbjct: 319 STGVGPSSFVKSLELSKSPGGRIGIDEWLRVPSVPDVFAIGDCSGFLESTGKPVLPALAQ 378
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL LLN+IGK GGGR S +++ELGDPFVYRHLGSMATIGRYKALVDLRQ+K
Sbjct: 379 VAERQGKYLAKLLNKIGKDGGGRRTSGEEVELGDPFVYRHLGSMATIGRYKALVDLRQSK 438
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E+KGL+L GF SW +WRSAYLTRV+SWRNRFYVA+NWATTFVFGRDISRI
Sbjct: 439 EAKGLALKGFASWFIWRSAYLTRVISWRNRFYVAINWATTFVFGRDISRI 488
>gi|224104264|ref|XP_002313376.1| predicted protein [Populus trichocarpa]
gi|222849784|gb|EEE87331.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/350 (85%), Positives = 324/350 (92%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHCETVTD L T++PW+FKISYDKL+IALGAEA TFGIHGVKE+A FLREV HAQEIRRK
Sbjct: 103 VHCETVTDGLDTVDPWRFKISYDKLIIALGAEALTFGIHGVKEHAIFLREVRHAQEIRRK 162
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSD+PG+SEEEKSRLLHCVVVGGGPTGVEFSGELSDFI++DVRQ YSHVKDYIH
Sbjct: 163 LLLNLMLSDMPGLSEEEKSRLLHCVVVGGGPTGVEFSGELSDFILKDVRQTYSHVKDYIH 222
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDD LR YAT QL+KSGV LVRGIVKDV QKLIL DGTEVPYGLLVW
Sbjct: 223 VTLIEANEILSSFDDSLRRYATKQLTKSGVHLVRGIVKDVKPQKLILTDGTEVPYGLLVW 282
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS+ VKSL+L KSPGGRIGIDEWLRVPSV DVFA+GDCSG+LESTGK VLPALAQ
Sbjct: 283 STGVGPSSFVKSLELSKSPGGRIGIDEWLRVPSVPDVFAIGDCSGFLESTGKPVLPALAQ 342
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL LLN+IGK GGGR S +++ELGDPFVYRHLGSMATIGRYKALVDLRQ+K
Sbjct: 343 VAERQGKYLAKLLNKIGKDGGGRRTSGEEVELGDPFVYRHLGSMATIGRYKALVDLRQSK 402
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E+KGL+L GF SW +WRSAYLTRV+SWRNRFYVA+NWATTFVFGRDISRI
Sbjct: 403 EAKGLALKGFASWFIWRSAYLTRVISWRNRFYVAINWATTFVFGRDISRI 452
>gi|21536893|gb|AAM61225.1| putative NADH dehydrogenase (ubiquinone oxidoreductase)
[Arabidopsis thaliana]
Length = 510
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 295/351 (84%), Positives = 326/351 (92%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHCETVT+ TL+PWKFKI+YDKLV+A GAEASTFGI+GV ENA FLREVHHAQEIRR
Sbjct: 160 EVHCETVTEGSSTLKPWKFKIAYDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRR 219
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+VPGI E+EK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRYSHVKD I
Sbjct: 220 KLLLNLMLSEVPGIGEDEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDI 279
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEA +ILSSFDDRLRHYA QL+KSGV+LVRGIVK+V QKLIL+DGTEVPYGLLV
Sbjct: 280 RVTLIEARDILSSFDDRLRHYAIKQLNKSGVKLVRGIVKEVKPQKLILDDGTEVPYGLLV 339
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS+ V+SLD PK PGGRIGIDEW+RVPSVQDVFA+GDCSGYLESTGK+ LPALA
Sbjct: 340 WSTGVGPSSFVRSLDFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALA 399
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAER+GKYL +L N +GKAGGGRANSAK+MELG+PFVY+HLGSMATIGRYKALVDLR++
Sbjct: 400 QVAEREGKYLTNLFNVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRES 459
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
KE KG+S+AGFLSW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 460 KEGKGISMAGFLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISRI 510
>gi|297826393|ref|XP_002881079.1| NDA2 H dehydrogenase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297326918|gb|EFH57338.1| NDA2 H dehydrogenase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 504
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 295/351 (84%), Positives = 324/351 (92%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHCET+TD L TL+PWKFKI+YDKLV+A GAEASTFGIHGV ENA FLREVHHAQEIRR
Sbjct: 154 EVHCETLTDGLNTLKPWKFKIAYDKLVVASGAEASTFGIHGVMENAIFLREVHHAQEIRR 213
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLSD PGIS+EEK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRYSHVKD I
Sbjct: 214 KLLLNLMLSDTPGISKEEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDI 273
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEA +ILSSFDDRLR YA QL+KSGVR VRGIVKDV SQKLIL+DGTEVPYGLLV
Sbjct: 274 HVTLIEARDILSSFDDRLRRYAIKQLNKSGVRFVRGIVKDVQSQKLILDDGTEVPYGLLV 333
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS+ V+SL LPK P GRIGIDEW+RVPSVQDVFA+GDCSGYLE+TGK LPALA
Sbjct: 334 WSTGVGPSSFVRSLGLPKDPTGRIGIDEWMRVPSVQDVFAIGDCSGYLETTGKPTLPALA 393
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAER+GKYL +LLN IGKA GGRANSAK++ELG PFVY+HLGSMATIGRYKALVDLR++
Sbjct: 394 QVAEREGKYLANLLNEIGKANGGRANSAKEIELGAPFVYKHLGSMATIGRYKALVDLRES 453
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K++KG+S+ GF+SW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 454 KDAKGISMTGFVSWFIWRSAYLTRVVSWRNRFYVAINWFTTFVFGRDISRI 504
>gi|18390737|ref|NP_563783.1| alternative NAD(P)H dehydrogenase 1 [Arabidopsis thaliana]
gi|75328901|sp|Q8GWA1.1|NDA1_ARATH RecName: Full=Alternative NAD(P)H dehydrogenase 1, mitochondrial;
AltName: Full=Internal non-phosphorylating NAD(P)H
dehydrogenase 1; Short=AtNDI1; Flags: Precursor
gi|26452964|dbj|BAC43558.1| unknown protein [Arabidopsis thaliana]
gi|28973319|gb|AAO63984.1| unknown protein [Arabidopsis thaliana]
gi|332189968|gb|AEE28089.1| alternative NAD(P)H dehydrogenase 1 [Arabidopsis thaliana]
Length = 510
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/351 (83%), Positives = 325/351 (92%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHCETVT+ TL+PWKFKI+YDKLV+A GAEASTFGI+GV ENA FLREVHHAQEIRR
Sbjct: 160 EVHCETVTEGSSTLKPWKFKIAYDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRR 219
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+VPGI E+EK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRYSHVKD I
Sbjct: 220 KLLLNLMLSEVPGIGEDEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDI 279
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEA +ILSSFDDRLRHYA QL+KSGV+LVRGIVK+V QKLIL+DGTEVPYG LV
Sbjct: 280 RVTLIEARDILSSFDDRLRHYAIKQLNKSGVKLVRGIVKEVKPQKLILDDGTEVPYGPLV 339
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS+ V+SLD PK PGGRIGIDEW+RVPSVQDVFA+GDCSGYLESTGK+ LPALA
Sbjct: 340 WSTGVGPSSFVRSLDFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALA 399
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAER+GKYL +L N +GKAGGGRANSAK+MELG+PFVY+HLGSMATIGRYKALVDLR++
Sbjct: 400 QVAEREGKYLANLFNVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRES 459
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
KE KG+S+AGFLSW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 460 KEGKGISMAGFLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISRI 510
>gi|297843508|ref|XP_002889635.1| hypothetical protein ARALYDRAFT_887930 [Arabidopsis lyrata subsp.
lyrata]
gi|297335477|gb|EFH65894.1| hypothetical protein ARALYDRAFT_887930 [Arabidopsis lyrata subsp.
lyrata]
Length = 509
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/351 (83%), Positives = 326/351 (92%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHCETVT+ TL+PWKFKI+YDKLV+A GAEASTFGI+GV ENA FLREVHHAQEIRR
Sbjct: 159 EVHCETVTEGSSTLKPWKFKIAYDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRR 218
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+VPGISE+EK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRY+HVKD I
Sbjct: 219 KLLLNLMLSEVPGISEDEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYAHVKDDI 278
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEA +ILSSFDDRLR YA QL+KSGV+LVRGIVK+V QKLIL+DGTEVPYGLLV
Sbjct: 279 RVTLIEARDILSSFDDRLRQYAIKQLNKSGVKLVRGIVKEVKPQKLILDDGTEVPYGLLV 338
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS+ V+SLD PK PGGRIGIDEW+RVPSVQDVFA+GDCSGYLESTGK+ LPALA
Sbjct: 339 WSTGVGPSSFVRSLDFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALA 398
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAER+GKYL +L N +GKAGGGRANSAK+MELG+PFVY+HLGSMATIGRYKALVDLR++
Sbjct: 399 QVAEREGKYLANLFNVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRES 458
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
KE KG+S+AGF+SW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 459 KEGKGISMAGFVSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISRI 509
>gi|15227684|ref|NP_180560.1| NADH dehydrogenase [Arabidopsis thaliana]
gi|75318710|sp|O80874.1|NDA2_ARATH RecName: Full=Alternative NAD(P)H dehydrogenase 2, mitochondrial;
Flags: Precursor
gi|3420052|gb|AAC31853.1| putative NADH dehydrogenase (ubiquinone oxidoreductase)
[Arabidopsis thaliana]
gi|330253238|gb|AEC08332.1| NADH dehydrogenase [Arabidopsis thaliana]
Length = 508
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/351 (83%), Positives = 322/351 (91%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHCET+TD L TL+PWKFKI+YDKLVIA GAEASTFGIHGV ENA FLREVHHAQEIRR
Sbjct: 158 EVHCETLTDGLNTLKPWKFKIAYDKLVIASGAEASTFGIHGVMENAIFLREVHHAQEIRR 217
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLSD PGIS+EEK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRY+HVKD I
Sbjct: 218 KLLLNLMLSDTPGISKEEKRRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYAHVKDDI 277
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEA +ILSSFDDRLR YA QL+KSGVR VRGIVKDV SQKLIL+DGTEVPYGLLV
Sbjct: 278 HVTLIEARDILSSFDDRLRRYAIKQLNKSGVRFVRGIVKDVQSQKLILDDGTEVPYGLLV 337
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS V+SL LPK P GRIGIDEW+RVPSVQDVFA+GDCSGYLE+TGK LPALA
Sbjct: 338 WSTGVGPSPFVRSLGLPKDPTGRIGIDEWMRVPSVQDVFAIGDCSGYLETTGKPTLPALA 397
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAER+GKYL +LLN IGK GGRANSAK++ELG PFVY+HLGSMATIGRYKALVDLR++
Sbjct: 398 QVAEREGKYLANLLNAIGKGNGGRANSAKEIELGVPFVYKHLGSMATIGRYKALVDLRES 457
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K++KG+S+ GF+SW +WRSAYLTRV+SWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 458 KDAKGISMTGFVSWFIWRSAYLTRVISWRNRFYVAINWFTTFVFGRDISRI 508
>gi|356500874|ref|XP_003519255.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 485
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/350 (82%), Positives = 325/350 (92%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHCE+VT+ + +PW+F +SYDKLVIALGA+ +TFGIHGV E+A FLREV+HAQEIRRK
Sbjct: 136 VHCESVTEGAQAPDPWRFTVSYDKLVIALGAQPTTFGIHGVYEHAIFLREVYHAQEIRRK 195
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLM+SDVPGI EEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDVRQRY+HVKDYIH
Sbjct: 196 LLLNLMMSDVPGIEEEEKQRLLHCVVVGGGPTGVEFSGELSDFIVRDVRQRYAHVKDYIH 255
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFD RLR YAT QL+KSGVRLVRGIVKDV+ +K+ILNDGTEVPYGLLVW
Sbjct: 256 VTLIEANEILSSFDVRLRQYATNQLTKSGVRLVRGIVKDVEEKKIILNDGTEVPYGLLVW 315
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS +++SLDLPK+PGGRIGIDEWLRVP+V+D+F++GDCSG++ESTGKT LPALAQ
Sbjct: 316 STGVGPSAIIRSLDLPKAPGGRIGIDEWLRVPTVEDIFSIGDCSGFVESTGKTPLPALAQ 375
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL LLN+IGKA GGRANSAKD++ GD FVY+H+GSMA+IG YKALVDLRQNK
Sbjct: 376 VAERQGKYLGILLNKIGKANGGRANSAKDVDFGDQFVYKHMGSMASIGSYKALVDLRQNK 435
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E KGLSLAGF+SW +WRSAYLTRV+SWRNRFYVA+NWATT VFGRDISRI
Sbjct: 436 EGKGLSLAGFVSWFIWRSAYLTRVISWRNRFYVAINWATTLVFGRDISRI 485
>gi|356553084|ref|XP_003544888.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 485
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/350 (82%), Positives = 325/350 (92%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHCE+VT+ + +PW+F ISYDKLVIALGA+ +TFGIHGV E+A FLREV+HAQEIRRK
Sbjct: 136 VHCESVTEGAQAPDPWRFTISYDKLVIALGAQPTTFGIHGVYEHAIFLREVYHAQEIRRK 195
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLM+SDVPGI EEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDVRQRY+HVKDYIH
Sbjct: 196 LLLNLMMSDVPGIEEEEKQRLLHCVVVGGGPTGVEFSGELSDFIVRDVRQRYAHVKDYIH 255
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFD RLR YAT QL+KSGVRLVRGIVKDV+ +K+ILNDGTEVPYGLLVW
Sbjct: 256 VTLIEANEILSSFDVRLRQYATNQLTKSGVRLVRGIVKDVEEKKIILNDGTEVPYGLLVW 315
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS +++SLDLPK+PGGRIGIDEWLRVP+V+D+F++GDCSG++ESTGKT LPALAQ
Sbjct: 316 STGVGPSAIIQSLDLPKAPGGRIGIDEWLRVPTVEDIFSIGDCSGFVESTGKTPLPALAQ 375
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL LLN+IGKA GGRANSAKD++ GD FVY+H+GSMA+IG YKALVDLRQ+K
Sbjct: 376 VAERQGKYLAFLLNKIGKANGGRANSAKDVDFGDQFVYKHMGSMASIGSYKALVDLRQSK 435
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E KGLSLAGF+SW +WRSAYLTRV+SWRNRFYVA+NWATT VFGRDISRI
Sbjct: 436 EGKGLSLAGFVSWFIWRSAYLTRVISWRNRFYVAINWATTLVFGRDISRI 485
>gi|356539622|ref|XP_003538295.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 509
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/350 (82%), Positives = 321/350 (91%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHCETVT+ + T+ PWKF ISYDKLVIALG++ STFGI GVKE+A FLREVHHAQEIRRK
Sbjct: 160 VHCETVTEGVETIAPWKFTISYDKLVIALGSQPSTFGIQGVKEHAIFLREVHHAQEIRRK 219
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPGISEEEK RLLHCVVVGGGPTGVEFSGELSDFI +DVRQRY HVKDYI
Sbjct: 220 LLLNLMLSDVPGISEEEKQRLLHCVVVGGGPTGVEFSGELSDFITKDVRQRYVHVKDYIR 279
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRLR YAT QL+KSGVRLVRGIVKDV QK+ LNDG+EVPYGLLVW
Sbjct: 280 VTLIEANEILSSFDDRLRRYATKQLTKSGVRLVRGIVKDVKPQKISLNDGSEVPYGLLVW 339
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGP +++SLDLPK+PGGRIG+DEWLRVPSVQDVF++GDCSG++ESTG+ LPALAQ
Sbjct: 340 STGVGPLPMIQSLDLPKAPGGRIGVDEWLRVPSVQDVFSIGDCSGFVESTGRQTLPALAQ 399
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL +LLN+IGKAG G ANSAK++E GDPFVYRHLGSMATIGRYKALVDLRQ K
Sbjct: 400 VAERQGKYLAALLNKIGKAGAGHANSAKEIEFGDPFVYRHLGSMATIGRYKALVDLRQTK 459
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E+KGL+LAGFLS+ +WRSAY+TRV+SWRNRFYV VNW TT VFGRDISR+
Sbjct: 460 EAKGLALAGFLSFFIWRSAYITRVISWRNRFYVFVNWITTVVFGRDISRL 509
>gi|356566086|ref|XP_003551266.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 506
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/350 (82%), Positives = 322/350 (92%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHCETVT+ + T+ PWKF ISYDKLVIALG++ STFGI GVKE+A FLREVHHAQEIRRK
Sbjct: 157 VHCETVTEGVETIAPWKFTISYDKLVIALGSQPSTFGIQGVKEHAIFLREVHHAQEIRRK 216
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPGISEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY HVKDYI
Sbjct: 217 LLLNLMLSDVPGISEEEKQRLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYVHVKDYIR 276
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRLR YAT QL+KSGVRLVRGIVKDV QK++LNDG+EVPYGLLVW
Sbjct: 277 VTLIEANEILSSFDDRLRRYATKQLTKSGVRLVRGIVKDVKPQKIVLNDGSEVPYGLLVW 336
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGP +++SLDLPK+PGGRIG+DEWLRV SVQDVF++GDCSG++ESTG+ LPALAQ
Sbjct: 337 STGVGPLPIIQSLDLPKAPGGRIGVDEWLRVSSVQDVFSIGDCSGFVESTGRQTLPALAQ 396
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL +LLN+IGKAG G ANSAK++E GDPFVYRHLGSMA+IGRYKALVDLRQNK
Sbjct: 397 VAERQGKYLAALLNKIGKAGAGHANSAKEIEFGDPFVYRHLGSMASIGRYKALVDLRQNK 456
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E+KGL+LAGFLS+ +WRSAY+TRV+SWRNRFYV VNW TT VFGRDISR+
Sbjct: 457 EAKGLALAGFLSFFIWRSAYITRVISWRNRFYVFVNWITTVVFGRDISRL 506
>gi|225434562|ref|XP_002277505.1| PREDICTED: probable NADH dehydrogenase [Vitis vinifera]
gi|297745883|emb|CBI15939.3| unnamed protein product [Vitis vinifera]
Length = 499
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 289/350 (82%), Positives = 318/350 (90%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHC+T+T+ EPW F+ISYDKL+IA G+ TFGIHGV+E+A FLREVHHAQEIRRK
Sbjct: 150 VHCQTLTNGANVREPWDFEISYDKLIIASGSMPLTFGIHGVEEHAFFLREVHHAQEIRRK 209
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPGISE EK RLLHCVVVGGGPTGVEFSGELSDFI RDV QRY+HVK+YIH
Sbjct: 210 LLLNLMLSDVPGISEAEKQRLLHCVVVGGGPTGVEFSGELSDFITRDVHQRYAHVKNYIH 269
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRLRHYAT QL+KSGVRLVRGIVKDV K+ILN+GTEVPYGLLVW
Sbjct: 270 VTLIEANEILSSFDDRLRHYATRQLTKSGVRLVRGIVKDVKVDKIILNNGTEVPYGLLVW 329
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS+ VKS+++PKSPGGRIGIDEWLRVPS QD+FA+GDCSG+LESTGK VLPALAQ
Sbjct: 330 STGVGPSSFVKSMEVPKSPGGRIGIDEWLRVPSAQDIFAIGDCSGFLESTGKPVLPALAQ 389
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL LNRIGKAGGG AN A+DME G+PFVY+HLGSMA++GRYKALVDLRQ K
Sbjct: 390 VAERQGKYLAEQLNRIGKAGGGYANRARDMEFGEPFVYKHLGSMASLGRYKALVDLRQGK 449
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E KGLSLAGF SW++WRSAYLTRV+SWRNR YVA+NWATTFVFGRDISRI
Sbjct: 450 EGKGLSLAGFTSWIIWRSAYLTRVLSWRNRLYVAINWATTFVFGRDISRI 499
>gi|8954028|gb|AAF82202.1|AC067971_10 Strong similarity to an unknown protein F23F1.9 gi|7432659 from
Arabidopsis thaliana BAC F23F1 gb|AC004680. It contains
a pyridine nucleotide-disulphide oxidoreductase domain
PF|00070. EST gb|AI997290 comes from this gene
[Arabidopsis thaliana]
Length = 512
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 293/355 (82%), Positives = 324/355 (91%), Gaps = 6/355 (1%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHCETVT+ TL+PWKFKI+YDKLV+A GAEASTFGI+GV ENA FLREVHHAQEIRR
Sbjct: 160 EVHCETVTEGSSTLKPWKFKIAYDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRR 219
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+VPG E+EK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRYSHVKD I
Sbjct: 220 KLLLNLMLSEVPG--EDEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDI 277
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEA +ILSSFDDRLRHYA QL+KSGV+LVRGIVK+V QKLIL+DGTEVPYG LV
Sbjct: 278 RVTLIEARDILSSFDDRLRHYAIKQLNKSGVKLVRGIVKEVKPQKLILDDGTEVPYGPLV 337
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS+ V+SLD PK PGGRIGIDEW+RVPSVQDVFA+GDCSGYLESTGK+ LPALA
Sbjct: 338 WSTGVGPSSFVRSLDFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALA 397
Query: 242 Q----VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 297
Q VAER+GKYL +L N +GKAGGGRANSAK+MELG+PFVY+HLGSMATIGRYKALVD
Sbjct: 398 QVSNVVAEREGKYLANLFNVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVD 457
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
LR++KE KG+S+AGFLSW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 458 LRESKEGKGISMAGFLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISRI 512
>gi|255560820|ref|XP_002521423.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
gi|223539322|gb|EEF40913.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
Length = 546
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/351 (78%), Positives = 313/351 (89%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CETV++ EP++FK++YDKLVIA GAE TFGI GVKE+A FLREV+HAQEIR+
Sbjct: 195 EVYCETVSNGGLPQEPYRFKVAYDKLVIAAGAEPLTFGIKGVKEHAYFLREVNHAQEIRK 254
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+ PGI EEEK RLLHCVV+GGGPTGVEFSGELSDFIMRDV++RY+HVKD+I
Sbjct: 255 KLLLNLMLSENPGIPEEEKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVQERYAHVKDHI 314
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEANEILSSFD LR YAT L+KSGVRL RG+VK+V +KL L+DGTEVPYGLLV
Sbjct: 315 KVTLIEANEILSSFDVGLRQYATNHLTKSGVRLARGVVKEVHPKKLALSDGTEVPYGLLV 374
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS VKSLDLPKSPGGRIGIDEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 375 WSTGVGPSQFVKSLDLPKSPGGRIGIDEWLRVPSVEDVFALGDCAGFLEQTGRPVLPALA 434
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGKYL L N+IGK GG+A AKD+ LGDPFVY+H+GSMA++GRYKALVDLRQ+
Sbjct: 435 QVAERQGKYLVGLFNKIGKETGGKAFRAKDVRLGDPFVYKHMGSMASVGRYKALVDLRQS 494
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K++KGLSLAGF SWL+WRSAYLTRVVSWRNRFYVAVNWATT VFGRD SRI
Sbjct: 495 KDAKGLSLAGFFSWLIWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNSRI 545
>gi|385274841|dbj|BAM13875.1| type II NAD(P)H dehydrogenase [Arum maculatum]
Length = 556
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/352 (77%), Positives = 313/352 (88%), Gaps = 1/352 (0%)
Query: 2 KVHCETVTDEL-RTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+V+CE V + + EP+KFK++YDKLVIA GA+ TF I GVKE+A FLREV+HAQEIR
Sbjct: 204 EVYCEAVPSSVGLSTEPYKFKVAYDKLVIAAGADPLTFNIKGVKEHAFFLREVNHAQEIR 263
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
+KLLLNLMLSD PG+SEEEKSRLLHCVV+GGGPTGVEFSGELSDFI RDVRQRYSHVKDY
Sbjct: 264 KKLLLNLMLSDNPGVSEEEKSRLLHCVVIGGGPTGVEFSGELSDFITRDVRQRYSHVKDY 323
Query: 121 IHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
+ VTLIEANEILSSFD LR YAT L+KSGVRLVRG+VK+V +K++L+DGTEVPYGLL
Sbjct: 324 VRVTLIEANEILSSFDVSLRQYATNHLTKSGVRLVRGVVKEVMPKKILLSDGTEVPYGLL 383
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
VWSTGVGPS KS+DLPKSPGGRIGIDEWLRVPSV DVFA+GDC+G+L+ TGK VLPAL
Sbjct: 384 VWSTGVGPSGFTKSIDLPKSPGGRIGIDEWLRVPSVDDVFALGDCAGFLQETGKPVLPAL 443
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQVAERQGKYL LLNRIGK GG+A +++ ++L DPFVYRHLGSMA++GRYKALVDLRQ
Sbjct: 444 AQVAERQGKYLADLLNRIGKQNGGKAFASRGIDLRDPFVYRHLGSMASVGRYKALVDLRQ 503
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+K++KGL++AGF+SW +WRSAYLTRVVSWRNRFYVAVNWATT VFGRD SRI
Sbjct: 504 SKDAKGLAMAGFVSWFIWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNSRI 555
>gi|224116196|ref|XP_002317236.1| predicted protein [Populus trichocarpa]
gi|222860301|gb|EEE97848.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 270/351 (76%), Positives = 312/351 (88%), Gaps = 1/351 (0%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CET+++ EP++FK++YDKLVIA G+E TFGI GVKE+A FLREV+HAQEIR+
Sbjct: 139 EVYCETISNGGLPHEPYQFKVAYDKLVIAAGSEPLTFGIKGVKEHAFFLREVNHAQEIRK 198
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+ PGI EEEK RLLHCVV+GGGPTGVEFSGELSDFIMRDVR RY+HVKDY+
Sbjct: 199 KLLLNLMLSENPGIPEEEKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVRDRYTHVKDYV 258
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEANEILSSFD LR YAT L+KSGV +RG+VK+V + ++LNDGT VPYGLLV
Sbjct: 259 KVTLIEANEILSSFDVSLRQYATNHLTKSGVGFMRGVVKEVHPKNIVLNDGTNVPYGLLV 318
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS VKSLDLPKSPGGRIGIDEWLRVPSV+DVFA+GDC+G+LE++G+ VLPALA
Sbjct: 319 WSTGVGPSQFVKSLDLPKSPGGRIGIDEWLRVPSVEDVFALGDCAGFLENSGRPVLPALA 378
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGKYL L N+IGK GG+A SAKD+ LGDPFVY+HLGSMA++GRYKALVDLRQ+
Sbjct: 379 QVAERQGKYLLELFNKIGKH-GGKALSAKDIPLGDPFVYQHLGSMASVGRYKALVDLRQS 437
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K++KGLS AGF+SWL+WRSAYLTRVVSWRNRFYVAVNWATT VFGRD SRI
Sbjct: 438 KDAKGLSHAGFVSWLIWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNSRI 488
>gi|222619486|gb|EEE55618.1| hypothetical protein OsJ_03953 [Oryza sativa Japonica Group]
Length = 497
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 285/351 (81%), Positives = 313/351 (89%), Gaps = 3/351 (0%)
Query: 3 VHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+ CETVT+ E TL+PWKFK++YDKLV A GAEASTFGI GV ++A FLREVHHAQEIRR
Sbjct: 149 IDCETVTEGEKDTLKPWKFKVAYDKLVFACGAEASTFGIRGVTDHAIFLREVHHAQEIRR 208
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLSDVPGISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYI
Sbjct: 209 KLLLNLMLSDVPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYI 268
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD RLR YAT QL+KSGVRLVRGIVKDV KLIL++G EVPYGLLV
Sbjct: 269 HVTLIEANEILSSFDVRLRQYATNQLTKSGVRLVRGIVKDVQPNKLILDNGEEVPYGLLV 328
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS+ VKSL PKSPGGRIG+DEWLRVPS +DVFA+GDCSG+LESTGK VLPALA
Sbjct: 329 WSTGVGPSSFVKSLPFPKSPGGRIGVDEWLRVPSARDVFAIGDCSGFLESTGKDVLPALA 388
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGKYL LLN + KAGGG AN D++LG FVY+HLGSMAT+GRYKALVDLRQ+
Sbjct: 389 QVAERQGKYLAHLLNHVMKAGGGHANCEIDVDLGPAFVYKHLGSMATVGRYKALVDLRQS 448
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K G+SLAGF+SW +WRSAYLTRVVSWRNRFYVA+NW TT +FGRDISRI
Sbjct: 449 K--AGISLAGFVSWFIWRSAYLTRVVSWRNRFYVAINWLTTLLFGRDISRI 497
>gi|357125695|ref|XP_003564526.1| PREDICTED: probable NADH dehydrogenase-like [Brachypodium
distachyon]
Length = 496
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 283/351 (80%), Positives = 313/351 (89%), Gaps = 1/351 (0%)
Query: 3 VHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+ CETVT+ E TL+PWKFK++YDKLV GAEASTFGIHGV E+ATFLREV+HAQEIRR
Sbjct: 146 IECETVTEGEKDTLKPWKFKVAYDKLVFGCGAEASTFGIHGVTEHATFLREVYHAQEIRR 205
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLSDVPGISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDY+
Sbjct: 206 KLLLNLMLSDVPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYV 265
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD RLR YA QL KSGVRLVRGIVKDV KLIL++G EVPYGLLV
Sbjct: 266 HVTLIEANEILSSFDVRLRQYAINQLVKSGVRLVRGIVKDVLPDKLILDNGEEVPYGLLV 325
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVG S+ VKSL PKSPGGRIG+DEWLRVPS DVFA+GDCSG+LESTGK VLPALA
Sbjct: 326 WSTGVGASSFVKSLPFPKSPGGRIGVDEWLRVPSAPDVFAIGDCSGFLESTGKEVLPALA 385
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGKYL SLLN + K GGG ANS +M+LG FVY+H+GSMAT+GRYKALVDLRQ+
Sbjct: 386 QVAERQGKYLASLLNHVMKVGGGHANSVVEMDLGPKFVYKHMGSMATVGRYKALVDLRQS 445
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K+S+G+S+AGF SW +WRSAYLTRVVSWRNRFYVA+NW TT +FGRDISRI
Sbjct: 446 KDSRGVSIAGFASWFIWRSAYLTRVVSWRNRFYVAINWLTTLLFGRDISRI 496
>gi|218189310|gb|EEC71737.1| hypothetical protein OsI_04297 [Oryza sativa Indica Group]
Length = 497
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 285/351 (81%), Positives = 313/351 (89%), Gaps = 3/351 (0%)
Query: 3 VHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+ CETVT+ E TL+PWKFK++YDKLV A GAEASTFGI GV ++A FLREVHHAQEIRR
Sbjct: 149 IDCETVTEGEKDTLKPWKFKVAYDKLVFACGAEASTFGIRGVTDHAIFLREVHHAQEIRR 208
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLSDVPGISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYI
Sbjct: 209 KLLLNLMLSDVPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYI 268
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD RLR YAT QL+KSGVRLVRGIVKDV KLIL++G EVPYGLLV
Sbjct: 269 HVTLIEANEILSSFDVRLRQYATNQLTKSGVRLVRGIVKDVQPNKLILDNGEEVPYGLLV 328
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS+ VKSL PKSPGGRIG+DEWLRVPS +DVFA+GDCSG+LESTGK VLPALA
Sbjct: 329 WSTGVGPSSFVKSLPFPKSPGGRIGVDEWLRVPSARDVFAIGDCSGFLESTGKDVLPALA 388
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGKYL LLN + KAGGG AN D++LG FVY+HLGSMAT+GRYKALVDLRQ+
Sbjct: 389 QVAERQGKYLAHLLNHVMKAGGGHANCEIDVDLGPAFVYKHLGSMATVGRYKALVDLRQS 448
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K G+SLAGF+SW +WRSAYLTRVVSWRNRFYVA+NW TT +FGRDISRI
Sbjct: 449 K--AGISLAGFVSWFIWRSAYLTRVVSWRNRFYVAINWLTTLLFGRDISRI 497
>gi|356521315|ref|XP_003529302.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 550
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/351 (75%), Positives = 308/351 (87%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+++CE V + EP++FK++YDKLVIA G+E TFGI GVKENA FLREV+HAQEIR+
Sbjct: 199 EIYCEAVNNGGLPQEPYQFKVAYDKLVIATGSEPLTFGIKGVKENAFFLREVNHAQEIRK 258
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+LLLNLMLS+ PGISEEEK LLHCVV+GGGPTGVEFSGELSDFIMRDV +RY+HVKDYI
Sbjct: 259 RLLLNLMLSENPGISEEEKKCLLHCVVIGGGPTGVEFSGELSDFIMRDVHERYTHVKDYI 318
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD LR YAT L+KSGVRL+RG+VK+V +K+IL+DGTEVPYGLLV
Sbjct: 319 HVTLIEANEILSSFDVSLRQYATKHLTKSGVRLMRGVVKEVHPKKIILSDGTEVPYGLLV 378
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVG S VK+LDLPKS GGRIG+D+WLRVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 379 WSTGVGASQFVKTLDLPKSQGGRIGVDDWLRVPSVEDVFALGDCAGFLEHTGRPVLPALA 438
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGK+L L N IG GG+A SAK M G+PFVYRHLGSMA++G YKALVDLRQ+
Sbjct: 439 QVAERQGKFLVELFNEIGNQNGGKAYSAKGMPFGEPFVYRHLGSMASVGGYKALVDLRQS 498
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K+SKGLSLAGF+SW++WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 499 KDSKGLSLAGFVSWMIWRSAYLTRVLSWRNRFYVAVNWATTLVFGRDNSRI 549
>gi|385274831|dbj|BAM13870.1| type II NAD(P)H dehydrogenase [Symplocarpus renifolius]
Length = 553
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/351 (76%), Positives = 305/351 (86%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CE V EP+ F ++YDKLVIA GAE TF I GVKE+A FLREV+HAQEIR+
Sbjct: 202 EVYCEAVPGAGLPNEPYGFTVAYDKLVIAAGAEPLTFNIKGVKEHAFFLREVNHAQEIRK 261
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+ PGISEEEK+RLLHCVV+GGGPTGVEFSGELSDFIMRDVRQRYSHVKDY+
Sbjct: 262 KLLLNLMLSENPGISEEEKNRLLHCVVIGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYV 321
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEANEILSSFD LR YAT L KSGVRLVRG+VK+V +K+ILNDGT+VPYGLLV
Sbjct: 322 RVTLIEANEILSSFDVSLRQYATNHLQKSGVRLVRGVVKEVLPKKIILNDGTDVPYGLLV 381
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVG S +KSL+LPKSPGGRIGIDEW+RVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 382 WSTGVGASGFIKSLNLPKSPGGRIGIDEWMRVPSVEDVFALGDCAGFLEQTGRPVLPALA 441
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAER+GKYL L +IGK GGRA SAKD LGDPFVY+H GSMA++G YKALVDLRQ+
Sbjct: 442 QVAEREGKYLAELFVKIGKQDGGRAFSAKDASLGDPFVYKHFGSMASVGGYKALVDLRQS 501
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K++KGL++AGF+SW VWRSAYLTRVVSWRNRFYVA NWATT VFGRD SRI
Sbjct: 502 KDAKGLTMAGFVSWFVWRSAYLTRVVSWRNRFYVATNWATTLVFGRDNSRI 552
>gi|356527921|ref|XP_003532554.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 550
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/351 (75%), Positives = 311/351 (88%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+++CE V + EP++FK++YDKLVIA G+E TFGI GVKENA FLREV+HAQEIR+
Sbjct: 199 EIYCEAVNNGGLPQEPYQFKVAYDKLVIASGSEPLTFGIKGVKENAFFLREVNHAQEIRK 258
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+LLLNLMLS+ PGISEE+K RLLHCVV+GGGPTGVEFSGELSDFIMRDV++RY+HVKDYI
Sbjct: 259 RLLLNLMLSENPGISEEDKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVQERYTHVKDYI 318
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD LR YAT L+KSGVRL+RG+VK+V +K+IL+DGTEVPYGLLV
Sbjct: 319 HVTLIEANEILSSFDVSLRQYATKHLTKSGVRLMRGVVKEVHPKKIILSDGTEVPYGLLV 378
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVG S VK+LDLPKS GGRIG+D+WLRVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 379 WSTGVGASEFVKTLDLPKSQGGRIGVDDWLRVPSVEDVFALGDCAGFLEHTGRPVLPALA 438
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGK+L L + IG GG+A SAK M LG+PFVY+HLGSMA++G YKALVDLRQ+
Sbjct: 439 QVAERQGKFLVELFDEIGNQNGGKAYSAKGMPLGEPFVYKHLGSMASVGGYKALVDLRQS 498
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K+SKGLSLAGF+SW++WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 499 KDSKGLSLAGFVSWMIWRSAYLTRVLSWRNRFYVAVNWATTLVFGRDNSRI 549
>gi|5734585|emb|CAB52796.1| putative internal rotenone-insensitive NADH dehydrogenase [Solanum
tuberosum]
Length = 495
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 279/350 (79%), Positives = 313/350 (89%), Gaps = 1/350 (0%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
+ CETVT+ + TLE WKF +SYDKLVIA GA A TFGI GV E+ATFLREVHHAQEIRRK
Sbjct: 147 IECETVTEGVETLEAWKFNVSYDKLVIASGAHALTFGIKGVNEHATFLREVHHAQEIRRK 206
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPG+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI++DV QRY+HVKDYIH
Sbjct: 207 LLLNLMLSDVPGVSEEEKRRLLHCVVVGGGPTGVEFSGELSDFILKDVHQRYAHVKDYIH 266
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRLR YAT QL+KSGVRLVRG+V+ V +IL+DGT VPYGLLVW
Sbjct: 267 VTLIEANEILSSFDDRLRVYATNQLTKSGVRLVRGLVQHVQPDNIILSDGTNVPYGLLVW 326
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS V SLD+PK+ GRIGIDEWLRVPSVQDV+++GDCSG+LESTG+ VLPALAQ
Sbjct: 327 STGVGPSPFVNSLDIPKAK-GRIGIDEWLRVPSVQDVYSIGDCSGFLESTGRQVLPALAQ 385
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL SLLN++GK GGG AN A+++ LGDPFVY+HLGSMATIGRYKALVDLR++K
Sbjct: 386 VAERQGKYLASLLNKVGKQGGGHANCAQNINLGDPFVYKHLGSMATIGRYKALVDLRESK 445
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
E+KG+SLAGF S+ VWRSAYLTRVVSWRN+ YV +NW TT VFGRDISRI
Sbjct: 446 EAKGVSLAGFTSFFVWRSAYLTRVVSWRNKIYVLINWLTTLVFGRDISRI 495
>gi|385274833|dbj|BAM13871.1| type II NAD(P)H dehydrogenase [Symplocarpus renifolius]
Length = 553
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/351 (76%), Positives = 302/351 (86%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CE V EP++F ++YDKLVIA GAE TF I GVKE+A FLREV+HAQEIR+
Sbjct: 202 EVYCEAVPGAGLPNEPYRFSVAYDKLVIAAGAEPLTFNIKGVKEHAFFLREVNHAQEIRK 261
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+ PGISEEEK RLLHCVV+GGGPTGVEFSGELSDFIMRDVRQRYSHVKDY+
Sbjct: 262 KLLLNLMLSENPGISEEEKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYV 321
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEANEILSSFD LR YAT L KSGVRLVRG+VK+V +K+ILNDGTEVPYGLLV
Sbjct: 322 RVTLIEANEILSSFDVGLRQYATNHLQKSGVRLVRGVVKEVLPRKIILNDGTEVPYGLLV 381
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVG S +KSL+LPKSPGGRIGIDEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 382 WSTGVGASGFIKSLNLPKSPGGRIGIDEWLRVPSVEDVFALGDCAGFLEQTGRPVLPALA 441
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAER+GKYL L +IGK GGRA SAKD LGDPFVY+H GSMA++G YKALVDLRQ+
Sbjct: 442 QVAEREGKYLAELFVKIGKQDGGRAFSAKDASLGDPFVYKHFGSMASVGGYKALVDLRQS 501
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++KG +LAGF SW +WRSAYLTRVVSWRNRFYVA NWATT VFGRD SRI
Sbjct: 502 TDAKGPTLAGFGSWFIWRSAYLTRVVSWRNRFYVAANWATTLVFGRDNSRI 552
>gi|224076814|ref|XP_002305005.1| predicted protein [Populus trichocarpa]
gi|222847969|gb|EEE85516.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/351 (75%), Positives = 312/351 (88%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CETV++ +P++FK++YDKLVIA GAE TFGI GVKE+A FLREV+HAQEIR+
Sbjct: 100 EVYCETVSNGGLPHDPYQFKVAYDKLVIAAGAEPLTFGIKGVKEHAFFLREVNHAQEIRK 159
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+ PGISEEEK LLHCVV+GGGPTGVEFSGELSDFI RDV+ RY+HVKDY+
Sbjct: 160 KLLLNLMLSENPGISEEEKKHLLHCVVIGGGPTGVEFSGELSDFIKRDVQDRYTHVKDYV 219
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEA+EILSSFD LR YAT L+KSGV L+RG+VK+V +K++L+D T VPYGLLV
Sbjct: 220 KVTLIEASEILSSFDVGLRQYATNHLTKSGVSLMRGVVKEVHPKKIVLSDETNVPYGLLV 279
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS VKSLDLPK+PGGRIGIDEWLRV SV+DVFA+GDC+G+LE++G+ VLPALA
Sbjct: 280 WSTGVGPSQFVKSLDLPKAPGGRIGIDEWLRVSSVEDVFALGDCAGFLENSGRPVLPALA 339
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGK+L LN+IGK GG+A SAKD+ LGDPFVY+HLGSMA++GRYKALVDLRQ+
Sbjct: 340 QVAERQGKFLVKFLNKIGKKDGGKAFSAKDIPLGDPFVYKHLGSMASVGRYKALVDLRQS 399
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K++KG+SLAGF+SWL+WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 400 KDAKGVSLAGFVSWLIWRSAYLTRVISWRNRFYVAVNWATTLVFGRDNSRI 450
>gi|359496334|ref|XP_002262771.2| PREDICTED: probable NADH dehydrogenase-like [Vitis vinifera]
gi|296080966|emb|CBI18598.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/352 (75%), Positives = 310/352 (88%), Gaps = 1/352 (0%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CETV + EP++F+++YDKLVIA GAE TFGI GV E+A FLREV+HAQEIR+
Sbjct: 194 EVYCETVGNVGLPHEPYRFRVAYDKLVIASGAEPLTFGIKGVNEHAFFLREVNHAQEIRK 253
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS-HVKDY 120
KLLLNLMLS+ PGISEEEK RLLHCVV+GGGPTGVEFSGELSDFIMRDVR+RYS HVKDY
Sbjct: 254 KLLLNLMLSESPGISEEEKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVRERYSTHVKDY 313
Query: 121 IHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
I VTLIEANEILSSF+ LR YAT L+KSGV RG+VK+V ++K++L+DGT+VPYGLL
Sbjct: 314 IQVTLIEANEILSSFEVGLRQYATNHLTKSGVHFKRGVVKEVHAKKIVLSDGTDVPYGLL 373
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
VWSTGVGPS VKSL++ KSPGGRIG+DEW R+PSV+DVFA+GDC+G+LE TGK VLPAL
Sbjct: 374 VWSTGVGPSEFVKSLNVSKSPGGRIGVDEWFRIPSVEDVFALGDCAGFLEQTGKQVLPAL 433
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQVAERQGK+L L NRIGK GG+A S KD+ +G+PFVY+HLGSMA++GRYKALVDLRQ
Sbjct: 434 AQVAERQGKFLVELFNRIGKENGGKALSGKDIPMGEPFVYKHLGSMASVGRYKALVDLRQ 493
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+K+++G+S AGF+SWLVWRSAYLTRVVSWRNRFYVAVNWATT VFGRD SRI
Sbjct: 494 SKDARGISHAGFISWLVWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNSRI 545
>gi|395146552|gb|AFN53705.1| putative rotenone-insensitive NADH-ubiquinone oxidoreductase [Linum
usitatissimum]
Length = 593
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/356 (75%), Positives = 305/356 (85%), Gaps = 5/356 (1%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+C+TVT+ EP KFK++YDKLVIA GAE TFGI GV+E+A FLREV+HAQEIR+
Sbjct: 238 EVYCQTVTNNGLNKEPHKFKVAYDKLVIAAGAEPLTFGIKGVEEHAFFLREVNHAQEIRK 297
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLSD PG+ EEEK RLLHCVV+GGGPTGVEFSGELSDFI +DVR+R+SHVKD I
Sbjct: 298 KLLLNLMLSDSPGVPEEEKKRLLHCVVIGGGPTGVEFSGELSDFIGKDVRERFSHVKDDI 357
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEANEILSSFD LR YAT L KSGV L+RG+VK+V K++LNDGT VPYGLLV
Sbjct: 358 KVTLIEANEILSSFDLGLRQYATNHLRKSGVNLMRGVVKEVHPHKIVLNDGTNVPYGLLV 417
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS VKSL LPKSPGGRIG+DE LRVPS DVFA+GDC+G+LESTGK VLPALA
Sbjct: 418 WSTGVGPSQFVKSLALPKSPGGRIGVDEHLRVPSAPDVFAMGDCAGFLESTGKPVLPALA 477
Query: 242 QVAERQGKYLFSLL-NRIGKAGGGRANSA----KDMELGDPFVYRHLGSMATIGRYKALV 296
QVAERQGKYL L NRIGK GG+A +A D L DPFVY+H+GSMAT+GRYKALV
Sbjct: 478 QVAERQGKYLVELFNNRIGKQNGGKAATAGAENDDAVLRDPFVYKHMGSMATVGRYKALV 537
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
DLRQ+K++KGLS+AGFLSW++WRSAYLTRVVSWRNRFYVAVNWATTFVFGRD SRI
Sbjct: 538 DLRQSKDAKGLSMAGFLSWVIWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDSSRI 593
>gi|357475817|ref|XP_003608194.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
gi|355509249|gb|AES90391.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
Length = 542
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/351 (74%), Positives = 309/351 (88%), Gaps = 2/351 (0%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CE VT+ + EP++FK++YDKLVIA GAE TFGI GVKE+A FLREV+HAQEIR+
Sbjct: 193 EVYCEAVTNGGLSKEPYQFKVAYDKLVIAAGAEPLTFGIKGVKEHAFFLREVYHAQEIRK 252
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+LLLNLMLS+ PGISEEEK RLLHCVV+GGGPTGVEFSGELSDFI RDVR+RY+HVKDYI
Sbjct: 253 RLLLNLMLSENPGISEEEKKRLLHCVVIGGGPTGVEFSGELSDFITRDVRERYTHVKDYI 312
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD LR YAT L+K V L+RG+VK+V QK++L+DGTEVPYGLLV
Sbjct: 313 HVTLIEANEILSSFDVGLRQYATKHLTK--VCLMRGVVKEVHPQKIVLSDGTEVPYGLLV 370
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS VK+L+LP SPGGRIG+D W+RVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 371 WSTGVGPSEFVKTLNLPSSPGGRIGVDGWMRVPSVEDVFALGDCAGFLEQTGRPVLPALA 430
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGK+L L N+IGK GG+A SA + LG+ FVY+H+GSMA++G YKALVDLRQ+
Sbjct: 431 QVAERQGKFLVELFNKIGKQNGGKALSADGITLGEQFVYKHMGSMASVGAYKALVDLRQS 490
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K++KGLSLAGF+SWL+WRSAYLTRV+SWRNRFYVAVNW TTFVFGRD SRI
Sbjct: 491 KDAKGLSLAGFVSWLIWRSAYLTRVLSWRNRFYVAVNWGTTFVFGRDNSRI 541
>gi|359494544|ref|XP_003634801.1| PREDICTED: LOW QUALITY PROTEIN: probable NADH dehydrogenase-like
[Vitis vinifera]
Length = 505
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/354 (77%), Positives = 308/354 (87%), Gaps = 4/354 (1%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHC+T+T+ LEPW F+ISYDKL+IA + TFGIHGV+E+A FLREVHHAQEI+RK
Sbjct: 152 VHCQTLTNGANVLEPWDFEISYDKLIIASSSVPLTFGIHGVEEHAFFLREVHHAQEIKRK 211
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPGI E EK RLLHCVVVGGGP GVEFSGELSDFIMR+V QR++HVK+YIH
Sbjct: 212 LLLNLMLSDVPGILEAEKXRLLHCVVVGGGPIGVEFSGELSDFIMRNVHQRFAHVKNYIH 271
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRL+HYAT QL+KSGVRLVRGIVKDV K+ILN+GTEVPYGLLVW
Sbjct: 272 VTLIEANEILSSFDDRLQHYATRQLTKSGVRLVRGIVKDVKVDKIILNNGTEVPYGLLVW 331
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
ST VGPS+ VKS+++PKSPGGRIGIDEWLRVPS QD+FA+GDCSG+LESTGK VLPALAQ
Sbjct: 332 STRVGPSSFVKSIEVPKSPGGRIGIDEWLRVPSAQDIFAIGDCSGFLESTGKPVLPALAQ 391
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL---- 298
VAERQGKY+ LNRIGKAGGG AN A+D E +PF+Y+HLGSM + RYKALVDL
Sbjct: 392 VAERQGKYIAKQLNRIGKAGGGYANKARDKEFREPFIYKHLGSMTFLSRYKALVDLIRDI 451
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
RQ KE KGL LAGF SW++WRSAYLTR +SWRNR YVA+N ATTFVFGRDISRI
Sbjct: 452 RQGKEGKGLFLAGFTSWIIWRSAYLTRALSWRNRLYVAINXATTFVFGRDISRI 505
>gi|326494886|dbj|BAJ85538.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 502
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/351 (79%), Positives = 308/351 (87%), Gaps = 1/351 (0%)
Query: 3 VHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+ CETVT+ E TL+PWKFK+SYDKLV GAEASTFGI GV E+ATFLREVHHAQEIRR
Sbjct: 152 IDCETVTEGEKDTLKPWKFKVSYDKLVFGCGAEASTFGIRGVTEHATFLREVHHAQEIRR 211
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLSDVPGISE+EK RLLHCVVVGGGPTGVEFSGELSDFI+RDV++RYSHVKDY+
Sbjct: 212 KLLLNLMLSDVPGISEDEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKERYSHVKDYV 271
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD RLR YA QL KSGVRLV+GIVKDV KLIL++G EVPYGLLV
Sbjct: 272 HVTLIEANEILSSFDVRLRQYAINQLVKSGVRLVQGIVKDVQPDKLILDNGEEVPYGLLV 331
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVG S+ VKSL PKS GGRIG+DEWLRVPSV DVFAVGDC G+LESTGK VLPALA
Sbjct: 332 WSTGVGASSFVKSLPFPKSAGGRIGVDEWLRVPSVPDVFAVGDCCGFLESTGKEVLPALA 391
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQG YL LLN + KAGGG ANS +++LG FVY+HLGSMAT+GRYKALVDLRQ+
Sbjct: 392 QVAERQGLYLARLLNSVMKAGGGHANSQVEVDLGPKFVYKHLGSMATVGRYKALVDLRQS 451
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K SKG+S+AGF SW +WRSAYLTRVVSWRNR YVA+NW TT +FGRDISRI
Sbjct: 452 KGSKGISIAGFASWFIWRSAYLTRVVSWRNRLYVAINWLTTMIFGRDISRI 502
>gi|242054869|ref|XP_002456580.1| hypothetical protein SORBIDRAFT_03g038750 [Sorghum bicolor]
gi|241928555|gb|EES01700.1| hypothetical protein SORBIDRAFT_03g038750 [Sorghum bicolor]
Length = 503
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 284/351 (80%), Positives = 316/351 (90%), Gaps = 1/351 (0%)
Query: 3 VHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+ CETVTD E +LEPWKFK++YDKLV A GAEASTFGIHGV ++A FLREVHHAQEIRR
Sbjct: 153 IDCETVTDGEKDSLEPWKFKVAYDKLVFACGAEASTFGIHGVTDHAIFLREVHHAQEIRR 212
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+LLLNLMLSDVPGISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYI
Sbjct: 213 RLLLNLMLSDVPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYI 272
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD RLR YA QL KSGVRLV+GIVKDV K+IL++G EVPYGLLV
Sbjct: 273 HVTLIEANEILSSFDVRLRQYAIKQLIKSGVRLVQGIVKDVQPSKIILDNGEEVPYGLLV 332
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVG S VKSL PKSPGGRIG++EWLRVPSVQDV+A+GDCSG+LESTGK VLPALA
Sbjct: 333 WSTGVGASPFVKSLPFPKSPGGRIGVNEWLRVPSVQDVYAIGDCSGFLESTGKEVLPALA 392
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGKYL SLLN + KAGGG ANS + +LG PFVY+HLGSMAT+GRYKALVDLR++
Sbjct: 393 QVAERQGKYLASLLNHVMKAGGGHANSVTEADLGPPFVYKHLGSMATVGRYKALVDLRKS 452
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
KES+G+SLAGF+SW +WRSAYLTRV+SWRNRFYVA+NW TT +FGRDISRI
Sbjct: 453 KESRGISLAGFVSWFIWRSAYLTRVISWRNRFYVAINWLTTLLFGRDISRI 503
>gi|449433882|ref|XP_004134725.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
[Cucumis sativus]
Length = 544
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/352 (74%), Positives = 309/352 (87%), Gaps = 1/352 (0%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V CETV E ++F+++YDKLVIA+G+E TFG+ GVKE+A FLREV+HAQEIR+
Sbjct: 192 EVFCETVNYGELPHETYQFRVAYDKLVIAVGSEPLTFGVKGVKEHAFFLREVNHAQEIRK 251
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+ PG+SEEEK RLLHCVV+GGGPTGVEFSGELSDFI+RDV+ RY+H+KD I
Sbjct: 252 KLLLNLMLSENPGLSEEEKKRLLHCVVIGGGPTGVEFSGELSDFIIRDVQDRYAHIKDDI 311
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
VTLIEANEILSSFD LR YA L+K GVRL+RG+VK+V + K+IL+DGT+VPYGLL
Sbjct: 312 KVTLIEANEILSSFDFGLRTYAAKHLTKVCGVRLMRGVVKEVLADKIILSDGTDVPYGLL 371
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
VWSTGVGPS VKSL LPK+PGGRIG+D W+RVPSV+DVFA+GDC+G+LE TGK VLPAL
Sbjct: 372 VWSTGVGPSEFVKSLHLPKAPGGRIGVDGWMRVPSVEDVFALGDCAGFLEQTGKPVLPAL 431
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQVAER+GKYL L NRIGK GG+A SAKD+ LGDPFVY+HLGSMA++GRYKALVDLRQ
Sbjct: 432 AQVAEREGKYLVELFNRIGKENGGKALSAKDIPLGDPFVYKHLGSMASVGRYKALVDLRQ 491
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+K++KG+SLAGFLSWL+WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 492 SKDAKGISLAGFLSWLIWRSAYLTRVISWRNRFYVAVNWATTLVFGRDNSRI 543
>gi|449479374|ref|XP_004155582.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
[Cucumis sativus]
Length = 546
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/354 (74%), Positives = 307/354 (86%), Gaps = 3/354 (0%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V CETV E ++F+++YDKLVIA+G+E TFG+ GVKE+A FLREV+HAQEIR+
Sbjct: 192 EVFCETVNYGELPHETYQFRVAYDKLVIAVGSEPLTFGVKGVKEHAFFLREVNHAQEIRK 251
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLS+ PG+SEEEK RLLHCVV+GGGPTGVEFSGELSDFI+RDV+ RY+H+KD I
Sbjct: 252 KLLLNLMLSENPGLSEEEKKRLLHCVVIGGGPTGVEFSGELSDFIIRDVQDRYAHIKDDI 311
Query: 122 HVTLIEANEILSSFDDRLRHYATTQL---SKSGVRLVRGIVKDVDSQKLILNDGTEVPYG 178
VTLIEANEILSSFD LR YA L S GVRL+RG+VK+V + K+IL+ GT+VPYG
Sbjct: 312 KVTLIEANEILSSFDFGLRTYAAKHLTEGSTCGVRLMRGVVKEVLADKIILSGGTDVPYG 371
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
LLVWSTGVGPS VKSL LPK+PGGRIG+D W+RVPSV+DVFA+GDC+G+LE TGK VLP
Sbjct: 372 LLVWSTGVGPSEFVKSLHLPKAPGGRIGVDGWMRVPSVEDVFALGDCAGFLEQTGKPVLP 431
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
ALAQVAER+GKYL L NRIGK GG+A SAKD+ LGDPFVY+HLGSMA++GRYKALVDL
Sbjct: 432 ALAQVAEREGKYLVELFNRIGKENGGKALSAKDIPLGDPFVYKHLGSMASVGRYKALVDL 491
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
RQ+K++KG+SLAGFLSWL+WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 492 RQSKDAKGISLAGFLSWLIWRSAYLTRVISWRNRFYVAVNWATTLVFGRDNSRI 545
>gi|293333995|ref|NP_001168889.1| uncharacterized protein LOC100382694 [Zea mays]
gi|223973511|gb|ACN30943.1| unknown [Zea mays]
gi|413952050|gb|AFW84699.1| hypothetical protein ZEAMMB73_486976 [Zea mays]
Length = 501
Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust.
Identities = 285/352 (80%), Positives = 316/352 (89%), Gaps = 2/352 (0%)
Query: 3 VHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+ CETVTD E +LEPWKFK++YDKLV A GAEASTFGIHGV ++A FLREVHHAQEIRR
Sbjct: 150 IDCETVTDGEKDSLEPWKFKVAYDKLVFACGAEASTFGIHGVTDHAIFLREVHHAQEIRR 209
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+LLLNLMLSD+PGISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYI
Sbjct: 210 RLLLNLMLSDLPGISEEEKCRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYI 269
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD RLR YAT QL KSGVRLV+GIVKDV K+IL++G EVPYGLLV
Sbjct: 270 HVTLIEANEILSSFDVRLRQYATKQLIKSGVRLVQGIVKDVQPNKIILDNGEEVPYGLLV 329
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVG S VKSL PKSPGGRIG++EWLRVPSV DV+A+GDCSG+LESTGK VLPALA
Sbjct: 330 WSTGVGASPFVKSLPFPKSPGGRIGVNEWLRVPSVHDVYAIGDCSGFLESTGKEVLPALA 389
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG-DPFVYRHLGSMATIGRYKALVDLRQ 300
QVAERQGKYL SLLN + KAGGG ANS + +LG PFVY+HLGSMAT+GRYKALVDLRQ
Sbjct: 390 QVAERQGKYLASLLNHVMKAGGGHANSETEADLGRPPFVYKHLGSMATVGRYKALVDLRQ 449
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+KES+G+SLAGF+SW +WRSAYLTRVVSWRNRFYVA+NW TT +FGRDISRI
Sbjct: 450 SKESRGISLAGFVSWFIWRSAYLTRVVSWRNRFYVAINWLTTLLFGRDISRI 501
>gi|255569381|ref|XP_002525658.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
gi|223535094|gb|EEF36776.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
Length = 472
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 270/313 (86%), Positives = 287/313 (91%), Gaps = 3/313 (0%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHCET TD T++PWKF ISYDKLVIALGAEASTFGIHGVKE+A FLREVHHAQEIRRK
Sbjct: 149 VHCETATDGSSTMDPWKFDISYDKLVIALGAEASTFGIHGVKEHAIFLREVHHAQEIRRK 208
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY+HVKDYIH
Sbjct: 209 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDYIH 268
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRLRHYAT QL+KSGV+LVRGIVKDV QKL+L+DG+EVPYGLLVW
Sbjct: 269 VTLIEANEILSSFDDRLRHYATKQLTKSGVQLVRGIVKDVKPQKLVLSDGSEVPYGLLVW 328
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS LVKSLDLPKSPGGRIGIDEWLRVPSV DVFA+GDCSG+LESTGK+VLPALAQ
Sbjct: 329 STGVGPSHLVKSLDLPKSPGGRIGIDEWLRVPSVPDVFAIGDCSGFLESTGKSVLPALAQ 388
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL LLN+I +AGGG+ANS D+ELGDPFVYRHLGSMATIGRYKALVDLRQ+K
Sbjct: 389 VAERQGKYLAGLLNKIARAGGGQANSCVDIELGDPFVYRHLGSMATIGRYKALVDLRQSK 448
Query: 303 ESKGLSLAGFLSW 315
S F SW
Sbjct: 449 VSTEYP---FTSW 458
>gi|37725947|gb|AAO27256.1| putative NADH-dehydrogenase [Pisum sativum]
Length = 391
Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/351 (74%), Positives = 307/351 (87%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CETV++ + EP++FK++YDKLVIA GAE STFGI GVKE+A FLREV+HAQEIR+
Sbjct: 40 EVYCETVSNGGLSREPYQFKVAYDKLVIASGAEPSTFGIKGVKEHAFFLREVNHAQEIRK 99
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+LLLNLMLS+ PGISE K LLHCVVVGGGPTGVEFSGELSDFI +DVR+RY+HVKDYI
Sbjct: 100 RLLLNLMLSENPGISEGGKEGLLHCVVVGGGPTGVEFSGELSDFITKDVRERYTHVKDYI 159
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD LR YA L+KSGVR VRG+VK+V QK++L+DGT+VPYGLLV
Sbjct: 160 HVTLIEANEILSSFDVSLRQYAMKHLTKSGVRFVRGVVKEVHPQKIVLSDGTKVPYGLLV 219
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS VK L LP SPGGRIG+D W+RVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 220 WSTGVGPSEFVKKLYLPVSPGGRIGVDGWMRVPSVEDVFALGDCAGFLEQTGRPVLPALA 279
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGK+L L N+IGK GG+A SA + GDPFVY+HLGSMA++G YKALVDLRQ+
Sbjct: 280 QVAERQGKFLVELFNKIGKQDGGKALSANGIPFGDPFVYKHLGSMASVGAYKALVDLRQS 339
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K++KGLSLAGF+SWL+WRSAYLTRV++WRNRFYVAVNW TTFVFGRD SRI
Sbjct: 340 KDAKGLSLAGFVSWLIWRSAYLTRVLNWRNRFYVAVNWGTTFVFGRDNSRI 390
>gi|357122343|ref|XP_003562875.1| PREDICTED: probable NADH dehydrogenase-like [Brachypodium
distachyon]
Length = 558
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/356 (74%), Positives = 307/356 (86%), Gaps = 5/356 (1%)
Query: 2 KVHCETVTDE--LRTL--EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQ 57
+VHC +DE + TL P++F+++YDKLVIA GAE TF I GV+ENA FLREV HAQ
Sbjct: 202 EVHCTVASDEAAVGTLPRNPYRFRVAYDKLVIASGAEPLTFNIKGVEENAVFLREVSHAQ 261
Query: 58 EIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 117
EIRRKLL NLMLS+ PG+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVR+RY+HV
Sbjct: 262 EIRRKLLTNLMLSENPGLSEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRERYAHV 321
Query: 118 KDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPY 177
KDY+ VTLIEANEILSSFD LR YAT LSK GV+LVRG+VK+V+ K++L+DGT VPY
Sbjct: 322 KDYVKVTLIEANEILSSFDIGLRQYATNHLSKYGVKLVRGVVKEVEPTKIVLSDGTSVPY 381
Query: 178 GLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
GLLVWSTGVGPS VKSLDLPKSPGGRIG+DEWLRVPS DV+A+GDC+G+LE TGK VL
Sbjct: 382 GLLVWSTGVGPSEFVKSLDLPKSPGGRIGVDEWLRVPSADDVYALGDCAGFLERTGKPVL 441
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALV 296
PALAQVAER+GKYL +LL R+ GG+A+ K +LG+PFVY+HLGSMA++GRYKALV
Sbjct: 442 PALAQVAEREGKYLAALLKRVAAQNGGKAHCCGKKTDLGEPFVYKHLGSMASVGRYKALV 501
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
DLR+NK++KG+S+AGF+SWLVWRSAYLTRVVSWRNRFYVAVNWATT VFGRD +RI
Sbjct: 502 DLRENKDAKGVSMAGFVSWLVWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNTRI 557
>gi|242045990|ref|XP_002460866.1| hypothetical protein SORBIDRAFT_02g036490 [Sorghum bicolor]
gi|241924243|gb|EER97387.1| hypothetical protein SORBIDRAFT_02g036490 [Sorghum bicolor]
Length = 566
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/352 (73%), Positives = 299/352 (84%), Gaps = 1/352 (0%)
Query: 2 KVHCETVT-DELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+V+C + D +P++FKI+YDKLVIA GAE TF I GV+ENA FLREV HAQEIR
Sbjct: 214 EVYCTAASVDAQLPSDPYQFKIAYDKLVIASGAEPLTFNIKGVQENAIFLREVSHAQEIR 273
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
RKLL NLML++ PG+S+EEK RLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY+HVKDY
Sbjct: 274 RKLLTNLMLAENPGLSDEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDY 333
Query: 121 IHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
+ VTLIEANEILSSFD LR YAT LSK GV LVRGIVK+V ++ L+DGT VPYGLL
Sbjct: 334 VKVTLIEANEILSSFDIGLRQYATNHLSKYGVNLVRGIVKEVKPTEITLSDGTRVPYGLL 393
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
VWSTGVGPS VKSLDLPKSPGGRIG+DEWLRVP+ DVFA+GDC+G+LE TGK VLPAL
Sbjct: 394 VWSTGVGPSEFVKSLDLPKSPGGRIGVDEWLRVPTAPDVFALGDCAGFLEGTGKPVLPAL 453
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQVAER+G+YL LL ++ GG+A+ A +LG+PFVY+H+GSMA++GRYKALVDLR+
Sbjct: 454 AQVAEREGRYLARLLGKVAAQNGGKAHCAGKADLGEPFVYKHIGSMASVGRYKALVDLRE 513
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
NK++KG+S+AGFLSWL+WRSAYLTRVVSWRNRFYVAVNW TT VFGRD +RI
Sbjct: 514 NKDAKGVSMAGFLSWLMWRSAYLTRVVSWRNRFYVAVNWGTTLVFGRDNTRI 565
>gi|223949989|gb|ACN29078.1| unknown [Zea mays]
gi|414887135|tpg|DAA63149.1| TPA: hypothetical protein ZEAMMB73_653266 [Zea mays]
gi|414887136|tpg|DAA63150.1| TPA: hypothetical protein ZEAMMB73_653266 [Zea mays]
Length = 557
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/352 (72%), Positives = 298/352 (84%), Gaps = 1/352 (0%)
Query: 2 KVHCETVT-DELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+V+CE + D P++FK++YDKLVIA GAE TF I GV+E+A FLREV HAQEIR
Sbjct: 205 EVYCEAASSDGQLPCHPYRFKVAYDKLVIASGAEPLTFNIKGVQEHAIFLREVSHAQEIR 264
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
RKLL NLML++ PG+S EEK RLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY+HVKDY
Sbjct: 265 RKLLANLMLAENPGLSAEEKERLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDY 324
Query: 121 IHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
+ +TLIEANEILSSFD LR YAT LSK GV LVRGIVK+V + ++ L+DGT VPYGLL
Sbjct: 325 VKITLIEANEILSSFDIGLRQYATNHLSKYGVNLVRGIVKEVKATEITLSDGTRVPYGLL 384
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
VWSTGVGPS V+SL LPKSPGGR+G+DEWLRVP+ DVFA+GDC+G+LE TGK VLPAL
Sbjct: 385 VWSTGVGPSEFVRSLHLPKSPGGRVGVDEWLRVPTAPDVFALGDCAGFLEGTGKPVLPAL 444
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQVAER+G+YL LL RI GG+A+ A +LG+PFVY+H+GSMA++GRYKALVDLR+
Sbjct: 445 AQVAEREGRYLARLLGRIAAQNGGKAHCAGKADLGEPFVYKHIGSMASVGRYKALVDLRE 504
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
NK++KG+S+AGFLSWL+WRSAYLTRVVSWRNRFYVAVNW TT VFGRD +RI
Sbjct: 505 NKDAKGVSMAGFLSWLMWRSAYLTRVVSWRNRFYVAVNWGTTLVFGRDNTRI 556
>gi|115472809|ref|NP_001060003.1| Os07g0564500 [Oryza sativa Japonica Group]
gi|22830946|dbj|BAC15811.1| putative NADH dehydrogenase [Oryza sativa Japonica Group]
gi|113611539|dbj|BAF21917.1| Os07g0564500 [Oryza sativa Japonica Group]
gi|215768143|dbj|BAH00372.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 562
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/352 (72%), Positives = 299/352 (84%), Gaps = 1/352 (0%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHC + P+ FK+SYDKLVIA G+E TFGI GV ENA FLREV HAQEIRR
Sbjct: 210 EVHCTAADGDGLPANPYNFKVSYDKLVIASGSEPLTFGIKGVAENAIFLREVSHAQEIRR 269
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLL NLMLS+ PG+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVR+RY+HVKDY+
Sbjct: 270 KLLTNLMLSENPGLSEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRERYAHVKDYV 329
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEANEILSSFD LR YAT LSK GV LVRG+VK+V +++ L+DG+ VPYG+LV
Sbjct: 330 KVTLIEANEILSSFDVGLRQYATDHLSKYGVNLVRGVVKEVKPREIELSDGSRVPYGVLV 389
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS V+SL LPKSPGGRIG+DEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 390 WSTGVGPSEFVRSLPLPKSPGGRIGVDEWLRVPSVEDVFALGDCAGFLEGTGRAVLPALA 449
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
QVAER+G+YL +++RI GGRA A ELG+PFVY+H+GSMA++GRYKALVDLR+
Sbjct: 450 QVAEREGRYLARVMSRIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLRE 509
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
NK+++G+S+AGF+SWL+WRSAYLTRVVSWRNRFYVAVNWATT VFGRD +RI
Sbjct: 510 NKDARGVSMAGFVSWLMWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNTRI 561
>gi|125558821|gb|EAZ04357.1| hypothetical protein OsI_26497 [Oryza sativa Indica Group]
Length = 561
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/352 (72%), Positives = 299/352 (84%), Gaps = 1/352 (0%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHC + P+ FK+SYDKLVIA G+E TFGI GV ENA FLREV HAQEIRR
Sbjct: 209 EVHCTAADGDGLPANPYNFKVSYDKLVIASGSEPLTFGIKGVAENAIFLREVSHAQEIRR 268
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLL NLMLS+ PG+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVR+RY+HVKDY+
Sbjct: 269 KLLTNLMLSENPGLSEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRERYAHVKDYV 328
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEANEILSSFD LR YAT LSK GV LVRG+VK+V +++ L+DG+ VPYG+LV
Sbjct: 329 KVTLIEANEILSSFDVGLRQYATDHLSKYGVNLVRGVVKEVKPREIELSDGSRVPYGVLV 388
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS V+SL LPKSPGGRIG+DEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 389 WSTGVGPSEFVRSLPLPKSPGGRIGVDEWLRVPSVEDVFALGDCAGFLEGTGRAVLPALA 448
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
QVAER+G+YL +++RI GGRA A ELG+PFVY+H+GSMA++GRYKALVDLR+
Sbjct: 449 QVAEREGRYLARVMSRIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLRE 508
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
NK+++G+S+AGF+SWL+WRSAYLTRVVSWRNRFYVA+NWATT VFGRD +RI
Sbjct: 509 NKDARGVSMAGFVSWLMWRSAYLTRVVSWRNRFYVAINWATTLVFGRDNTRI 560
>gi|302793204|ref|XP_002978367.1| hypothetical protein SELMODRAFT_176951 [Selaginella moellendorffii]
gi|300153716|gb|EFJ20353.1| hypothetical protein SELMODRAFT_176951 [Selaginella moellendorffii]
Length = 539
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/350 (75%), Positives = 304/350 (86%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V+CE + DE T WKFK+ YDKLVIA GAE STFGI GV E ATFLREV HA++IRR+
Sbjct: 190 VYCEALDDEGVTEGNWKFKVCYDKLVIASGAEPSTFGIKGVNEYATFLREVPHARDIRRR 249
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSD+PG+ EEK RLLHCVVVGGGPTGVEFSGELSDFI RDV ++YSHVK+Y+H
Sbjct: 250 LLLNLMLSDIPGVPIEEKERLLHCVVVGGGPTGVEFSGELSDFIRRDVHEKYSHVKEYVH 309
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFD RLR YA LSKSGV+L+RG+VK+V + +LILNDG+ VPYG+LVW
Sbjct: 310 VTLIEANEILSSFDVRLRQYAVNHLSKSGVKLLRGVVKEVFADRLILNDGSTVPYGVLVW 369
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS VK L+ KSPGGRIG+DE++RVP +D++A+GDC+GYL+STGK +LPALAQ
Sbjct: 370 STGVGPSNFVKKLEFEKSPGGRIGVDEYMRVPQFEDIYAIGDCAGYLKSTGKPILPALAQ 429
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL + LN + AGGGRA +AK +LG+PFVYRHLGSMA++GRYKALVDLR+NK
Sbjct: 430 VAERQGKYLGAALNSLALAGGGRAGAAKTTKLGEPFVYRHLGSMASVGRYKALVDLRENK 489
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++KGLS AG LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR
Sbjct: 490 DAKGLSWAGILSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRF 539
>gi|302773572|ref|XP_002970203.1| hypothetical protein SELMODRAFT_231541 [Selaginella moellendorffii]
gi|300161719|gb|EFJ28333.1| hypothetical protein SELMODRAFT_231541 [Selaginella moellendorffii]
Length = 462
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/350 (75%), Positives = 304/350 (86%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V+CE + DE T WKFK+ YDKLVIA GAE STFGI GV E ATFLREV HA++IRR+
Sbjct: 113 VYCEALDDEGVTEGNWKFKVCYDKLVIASGAEPSTFGIKGVNEYATFLREVPHARDIRRR 172
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSD+PG+ EEK RLLHCVVVGGGPTGVEFSGELSDFI RDV ++YSHVK+Y+H
Sbjct: 173 LLLNLMLSDIPGVPIEEKERLLHCVVVGGGPTGVEFSGELSDFIRRDVHEKYSHVKEYVH 232
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFD RLR YA LSKSGV+L+RG+VK+V + +LILNDG+ VPYG+LVW
Sbjct: 233 VTLIEANEILSSFDVRLRQYAVNHLSKSGVKLLRGVVKEVFADRLILNDGSTVPYGVLVW 292
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS VK L+ KSPGGRIG+DE++RVP +DV+A+GDC+GYL+STGK +LPALAQ
Sbjct: 293 STGVGPSNFVKKLEFEKSPGGRIGVDEYMRVPQFEDVYAIGDCAGYLKSTGKPILPALAQ 352
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQGKYL + LN + AGGGRA +AK +LG+PFVYRHLGSMA++GRYKALVDLR+NK
Sbjct: 353 VAERQGKYLGAALNSLALAGGGRAGAAKTTKLGEPFVYRHLGSMASVGRYKALVDLRENK 412
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++KGLS AG LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR
Sbjct: 413 DAKGLSWAGILSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRF 462
>gi|115440829|ref|NP_001044694.1| Os01g0830100 [Oryza sativa Japonica Group]
gi|56202102|dbj|BAD73631.1| putative NADH dehydrogenase (ubiquinone) [Oryza sativa Japonica
Group]
gi|56785167|dbj|BAD81843.1| putative NADH dehydrogenase (ubiquinone) [Oryza sativa Japonica
Group]
gi|113534225|dbj|BAF06608.1| Os01g0830100 [Oryza sativa Japonica Group]
gi|215697595|dbj|BAG91589.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/301 (81%), Positives = 269/301 (89%), Gaps = 1/301 (0%)
Query: 3 VHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+ CETVT+ E TL+PWKFK++YDKLV A GAEASTFGI GV ++A FLREVHHAQEIRR
Sbjct: 149 IDCETVTEGEKDTLKPWKFKVAYDKLVFACGAEASTFGIRGVTDHAIFLREVHHAQEIRR 208
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLLLNLMLSDVPGISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYI
Sbjct: 209 KLLLNLMLSDVPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYI 268
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTLIEANEILSSFD RLR YAT QL+KSGVRLVRGIVKDV KLIL++G EVPYGLLV
Sbjct: 269 HVTLIEANEILSSFDVRLRQYATNQLTKSGVRLVRGIVKDVQPNKLILDNGEEVPYGLLV 328
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WSTGVGPS+ VKSL PKSPGGRIG+DEWLRVPS +DVFA+GDCSG+LESTGK VLPALA
Sbjct: 329 WSTGVGPSSFVKSLPFPKSPGGRIGVDEWLRVPSARDVFAIGDCSGFLESTGKDVLPALA 388
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAERQGKYL LLN + KAGGG AN D++LG FVY+HLGSMAT+GRYKALVDLRQ+
Sbjct: 389 QVAERQGKYLAHLLNHVMKAGGGHANCEIDVDLGPAFVYKHLGSMATVGRYKALVDLRQS 448
Query: 302 K 302
K
Sbjct: 449 K 449
>gi|168009934|ref|XP_001757660.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691354|gb|EDQ77717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/354 (69%), Positives = 289/354 (81%), Gaps = 3/354 (0%)
Query: 2 KVHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+VHCE+V D + T KFKI+YDKLVIA GAEA+TFGI GV E+A FLR+V +A +IR
Sbjct: 96 EVHCESVYDGDTGTAGGEKFKIAYDKLVIATGAEATTFGIAGVHEHAIFLRDVKNAIDIR 155
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
KL+LNLM ++PG EE+ RLLHCVVVGGGPTGVEFSGELSDFI+RDV++++SHVKD+
Sbjct: 156 SKLMLNLMACEIPGTDIEERKRLLHCVVVGGGPTGVEFSGELSDFILRDVQRKFSHVKDH 215
Query: 121 IHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
I VTLIEANEILSSFD RLR YAT QL+KSGVRL RG+VK V +KLIL+DG+EVPYGLL
Sbjct: 216 IAVTLIEANEILSSFDVRLRQYATNQLTKSGVRLKRGMVKHVLPKKLILSDGSEVPYGLL 275
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
VWSTGVGPS V +L KS GGRIGID LRVP+ D++AVGDC+GYLE TGKT LPAL
Sbjct: 276 VWSTGVGPSKFVTNLPFEKSQGGRIGIDNSLRVPAHDDIYAVGDCAGYLEGTGKTPLPAL 335
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSA--KDMELGDPFVYRHLGSMATIGRYKALVDL 298
AQVAERQGKYL + LN++G++G GRA A + DPFVY+HLGSMAT+G YKALVDL
Sbjct: 336 AQVAERQGKYLATALNQLGESGHGRAGVAGSSTAPVSDPFVYKHLGSMATVGSYKALVDL 395
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
R++ GLS+ GF SWLVWRSAYLTRV+SWR RFYVA NW TTF+FGRDISR
Sbjct: 396 RESPHGSGLSMTGFKSWLVWRSAYLTRVISWRARFYVAFNWGTTFLFGRDISRF 449
>gi|168034940|ref|XP_001769969.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678690|gb|EDQ65145.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 525
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/353 (68%), Positives = 288/353 (81%), Gaps = 3/353 (0%)
Query: 2 KVHCETVTDELRTLEPW-KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+VHCE+V DE + KFK++YDKLVIA GAEASTFGI GV E+A FLR+V +A EIR
Sbjct: 174 EVHCESVLDEHAGHQGGDKFKVAYDKLVIATGAEASTFGIDGVYEHALFLRDVRNAMEIR 233
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
K+LLNL LS++PG EEK RLLHCVVVGGGPTGVEFSGELSDFI RDV++++SH KD
Sbjct: 234 SKMLLNLALSEIPGKDPEEKKRLLHCVVVGGGPTGVEFSGELSDFIRRDVQRKFSHSKDL 293
Query: 121 IHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
IHVTLIEANEIL++FD RLR YAT Q+ +SGV+L+RG+VK V +KLILNDG EVPYGLL
Sbjct: 294 IHVTLIEANEILNTFDVRLRQYATNQMKRSGVKLMRGMVKHVLPKKLILNDGNEVPYGLL 353
Query: 181 VWSTGVGPSTLVKSL-DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
VWSTGVGPS +KSL + KS GGRIG+D++LRVP+ DV+A+GDC+GY+E GK LPA
Sbjct: 354 VWSTGVGPSAFIKSLENFEKSKGGRIGVDDYLRVPAHDDVYALGDCAGYVERIGKPPLPA 413
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
LAQVAERQGKYL LN++GK G GRA + + DPFVY+HLGSMA++GRYKALVDLR
Sbjct: 414 LAQVAERQGKYLGESLNKLGKQGHGRAGAGTPFVV-DPFVYKHLGSMASVGRYKALVDLR 472
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
Q+ E+ G+SL GF SW++WRSAYLTR +SWR R YVA NW TTF+FGRDISR
Sbjct: 473 QSPEATGVSLTGFKSWIIWRSAYLTRTLSWRARLYVAFNWFTTFIFGRDISRF 525
>gi|228481019|gb|ACQ42209.1| putative mitochondrial type II NAD(P)H dehydrogenase [Actinidia
deliciosa]
Length = 312
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/276 (81%), Positives = 247/276 (89%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHC+TVTD TL+PW FKISYDKLVIA GA TFGI GV E+A FLREV+HAQEIRRK
Sbjct: 37 VHCQTVTDGEDTLDPWNFKISYDKLVIAAGAXPLTFGIKGVNEHAIFLREVYHAQEIRRK 96
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPG++EEEKSRLLHCVVVGGGPTGVEFSGELSDFI+RDV QRY+HVK+YIH
Sbjct: 97 LLLNLMLSDVPGVTEEEKSRLLHCVVVGGGPTGVEFSGELSDFIIRDVHQRYAHVKNYIH 156
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRLR YAT QL KSGVRLVRGIVKDV QK+IL+DGT VPYGLLVW
Sbjct: 157 VTLIEANEILSSFDDRLRQYATKQLVKSGVRLVRGIVKDVQPQKIILSDGTAVPYGLLVW 216
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS VK+L+LPK+PGGRIG+DEWLRVPS QDVF+ GDCSG+LESTGK VLPALAQ
Sbjct: 217 STGVGPSPFVKNLELPKAPGGRIGVDEWLRVPSAQDVFSXGDCSGFLESTGKPVLPALAQ 276
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPF 278
VAERQGKYL S LNRIG AGGG AN+ KD+E+G+ F
Sbjct: 277 VAERQGKYLASQLNRIGXAGGGHANTTKDIEVGEQF 312
>gi|222637287|gb|EEE67419.1| hypothetical protein OsJ_24758 [Oryza sativa Japonica Group]
Length = 512
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 254/331 (76%), Gaps = 27/331 (8%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+VHC + P+ FK+SYDKLVIA G+E TFGI GV ENA FLREV HAQEIRR
Sbjct: 53 EVHCTAADGDGLPANPYNFKVSYDKLVIASGSEPLTFGIKGVAENAIFLREVSHAQEIRR 112
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KLL NLMLS+ PG+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVR+RY+HVKDY+
Sbjct: 113 KLLTNLMLSENPGLSEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRERYAHVKDYV 172
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
VTLIEANEILSSFD LR YAT LSK GV LVRG+VK+V +++ L+DG
Sbjct: 173 KVTLIEANEILSSFDVGLRQYATDHLSKYGVNLVRGVVKEVKPREIELSDGPRA------ 226
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
SPGGRIG+DEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALA
Sbjct: 227 ------------------SPGGRIGVDEWLRVPSVEDVFALGDCAGFLEGTGRAVLPALA 268
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
QVAER+G+YL +++RI GGRA A ELG+PFVY+H+GSMA++GRYKALVDLR+
Sbjct: 269 QVAEREGRYLARVMSRIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLRE 328
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRV--VSW 329
NK+++G+S+AGF+SWL+WRSAYLTRV SW
Sbjct: 329 NKDARGVSMAGFVSWLMWRSAYLTRVFGASW 359
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/138 (68%), Positives = 121/138 (87%), Gaps = 1/138 (0%)
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
V+SL PKSPGGRIG+DEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAER+G+Y
Sbjct: 372 FVRSLPFPKSPGGRIGVDEWLRVPSVEDVFALGDCAGFLEGTGRAVLPALAQVAEREGRY 431
Query: 251 LFSLLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
L +++RI GGRA A ELG+PFVY+H+GSMA++GRYKALVDLR+NK+++G+S+
Sbjct: 432 LARVMSRIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLRENKDARGVSM 491
Query: 310 AGFLSWLVWRSAYLTRVV 327
AGF+SWL+WRSAYLTRV+
Sbjct: 492 AGFVSWLMWRSAYLTRVL 509
>gi|395146544|gb|AFN53697.1| putative mitochondrial rotenone-insensitive NADH-ubiquinone
oxidoreductase [Linum usitatissimum]
Length = 405
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/246 (82%), Positives = 225/246 (91%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V CETVTD +EPWKF I+YDKLVIA GAEA+TFGI GVKE+A FLREVH AQEIRRK
Sbjct: 155 VKCETVTDGPNAVEPWKFTIAYDKLVIASGAEATTFGIQGVKEHAIFLREVHQAQEIRRK 214
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSDVPG +E+EKSRLLHCVVVGGGPTGVEFSGELSDFIM+DVRQR++HVKDYI
Sbjct: 215 LLLNLMLSDVPGTTEQEKSRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRHAHVKDYIR 274
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIEANEILSSFDDRLR YAT QL+KSGVRLVRGIVKDV++ K++L++GTEVPYGLLVW
Sbjct: 275 VTLIEANEILSSFDDRLRQYATKQLTKSGVRLVRGIVKDVEADKIVLDNGTEVPYGLLVW 334
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS LVKSLDLPKSPGGRIGIDEWLRVP+V DVFA+GDCSG++ESTGK VLPALAQ
Sbjct: 335 STGVGPSPLVKSLDLPKSPGGRIGIDEWLRVPNVPDVFAIGDCSGFVESTGKPVLPALAQ 394
Query: 243 VAERQG 248
+ +G
Sbjct: 395 NLDSEG 400
>gi|395146524|gb|AFN53679.1| mitochondrial putative rotenone-insensitive NADH-ubiquinone
oxidoreductase [Linum usitatissimum]
Length = 563
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/240 (76%), Positives = 207/240 (86%), Gaps = 22/240 (9%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V+CE+VTD TLEPWKF I+YDKLVIALGAEA+TFGIHGVKE+A FLREVHHAQ+IRRK
Sbjct: 308 VNCESVTDGQTTLEPWKFNIAYDKLVIALGAEATTFGIHGVKEHAVFLREVHHAQQIRRK 367
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
LLLNLMLSD+PG +E+EKSRLLHCVVVGGGPTGVEFSGELSDFIM+DVR+R++HVKDYI
Sbjct: 368 LLLNLMLSDIPGTTEQEKSRLLHCVVVGGGPTGVEFSGELSDFIMKDVRKRHAHVKDYIR 427
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTLIE SGVRLVRGIVKDV+ K+IL++GTEVPYGLLVW
Sbjct: 428 VTLIE----------------------SGVRLVRGIVKDVEPHKIILDNGTEVPYGLLVW 465
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
STGVGPS+LVKSLDLPKSPGGRIGIDEWLRVP++ DVFA+GDCSG++ESTGK VLPALAQ
Sbjct: 466 STGVGPSSLVKSLDLPKSPGGRIGIDEWLRVPNMPDVFAIGDCSGFVESTGKQVLPALAQ 525
>gi|296082736|emb|CBI21741.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/247 (73%), Positives = 208/247 (84%), Gaps = 5/247 (2%)
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH 141
RLLHCVVVGGGP GVEFSGELSDFIMR+V QR++HVK+YIHVTLIEANEILSSFDDRL+H
Sbjct: 8 RLLHCVVVGGGPIGVEFSGELSDFIMRNVHQRFAHVKNYIHVTLIEANEILSSFDDRLQH 67
Query: 142 YATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSP 201
YAT QL+KSGVRLVRGIVKDV K+ILN+GTEVPYGLLVWST VGPS+ VKS+++PKSP
Sbjct: 68 YATRQLTKSGVRLVRGIVKDVKVDKIILNNGTEVPYGLLVWSTRVGPSSFVKSIEVPKSP 127
Query: 202 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA 261
GGRIGIDEWLRVPS QD+FA+GDCSG+LESTGK VLPALAQVAERQGKY+ LNRIGKA
Sbjct: 128 GGRIGIDEWLRVPSAQDIFAIGDCSGFLESTGKPVLPALAQVAERQGKYIAKQLNRIGKA 187
Query: 262 GGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSA 321
GGG AN A+D E +PF+Y+HLGSM + RYKALVDL S G F+S +++
Sbjct: 188 GGGYANKARDKEFREPFIYKHLGSMTFLSRYKALVDL-----SAGQGGQRFISSRIYKLD 242
Query: 322 YLTRVVS 328
YL +S
Sbjct: 243 YLAISIS 249
>gi|226504146|ref|NP_001146290.1| uncharacterized protein LOC100279865 [Zea mays]
gi|219886521|gb|ACL53635.1| unknown [Zea mays]
Length = 519
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/233 (71%), Positives = 193/233 (82%), Gaps = 1/233 (0%)
Query: 2 KVHCETVT-DELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+V+CE + D P++FK++YDKLVIA GAE TF I GV+E+A FLREV HAQEIR
Sbjct: 205 EVYCEAASSDGQLPCHPYRFKVAYDKLVIASGAEPLTFNIKGVQEHAIFLREVSHAQEIR 264
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
RKLL NLML++ PG+S EEK RLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY+HVKDY
Sbjct: 265 RKLLANLMLAENPGLSAEEKERLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDY 324
Query: 121 IHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
+ +TLIEANEILSSFD LR YAT LSK GV LVRGIVK+V + ++ L+DGT VPYGLL
Sbjct: 325 VKITLIEANEILSSFDIGLRQYATNHLSKYGVNLVRGIVKEVKATEITLSDGTRVPYGLL 384
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG 233
VWSTGVGPS V+SL LPKSPGGR+G+DEWLRVP+ DVFA+GDC+G+LE T
Sbjct: 385 VWSTGVGPSEFVRSLHLPKSPGGRVGVDEWLRVPTAPDVFALGDCAGFLEGTA 437
>gi|356503032|ref|XP_003520316.1| PREDICTED: LOW QUALITY PROTEIN: probable NADH dehydrogenase-like,
partial [Glycine max]
Length = 340
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/236 (62%), Positives = 185/236 (78%), Gaps = 3/236 (1%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V+CE V ++ EP++FK++YDKLVIA +E TFGI GVKE FL +V+HAQEIR+
Sbjct: 44 EVYCEAVNNDGLPREPYQFKVAYDKLVIASRSEPLTFGIKGVKEKXFFLHKVNHAQEIRK 103
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+LLLNLMLS GIS+EEK LLHCVV+ GGPT VEFSGELSDFIMR V++ Y HVKDYI
Sbjct: 104 RLLLNLMLSQETGISKEEKKCLLHCVVIRGGPTRVEFSGELSDFIMRHVQEHYIHVKDYI 163
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSK---SGVRLVRGIVKDVDSQKLILNDGTEVPYG 178
HVTLIEANEILS F+ + YA L+K S VRL+ G+VK V +K+IL++G +VPYG
Sbjct: 164 HVTLIEANEILSCFNVSVXQYAIKHLTKXCNSMVRLMWGVVKMVHLKKIILSEGKKVPYG 223
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK 234
LLVWSTGVG S VK++DLPKS GG IG+D+WL VPS++D F++GDC+G+LE G+
Sbjct: 224 LLVWSTGVGASXFVKTIDLPKSQGGIIGVDDWLHVPSMEDAFSLGDCAGFLEHIGR 279
>gi|302842542|ref|XP_002952814.1| hypothetical protein VOLCADRAFT_63040 [Volvox carteri f.
nagariensis]
gi|300261854|gb|EFJ46064.1| hypothetical protein VOLCADRAFT_63040 [Volvox carteri f.
nagariensis]
Length = 421
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 218/332 (65%), Gaps = 9/332 (2%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F +SYDKL I G++ STFGI GV E+A FLR+V A+ IR++L+ NL L+ +PG +E
Sbjct: 98 FAVSYDKLAICTGSQGSTFGIPGVLEHAHFLRDVKQAEAIRQRLIENLALAGIPGRPLDE 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH V+VGGGPTGVE +GEL+DFI ++R+ Y + VTL+EA E+L SFD L
Sbjct: 158 WQRLLHVVIVGGGPTGVEVAGELTDFISNELRKLYPERSRAMRVTLVEARELLGSFDASL 217
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R YA +L + GV L + ++ + + + DGT +PYGL +WSTGVGP+ SL K
Sbjct: 218 REYAARKLIRRGVVLRKASLRGYRTVRPV-QDGTVLPYGLCIWSTGVGPTPFTLSLPFAK 276
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
+ GRI +D+++R V V+A+GDC ++ LPALAQVAE+QG+YL +LN
Sbjct: 277 TAVGRIAVDKFMR--PVPHVYALGDCCANPDNP----LPALAQVAEQQGRYLARVLNAAA 330
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
K G + +L F YRHLGSMAT+G + A+++L + + + LSLAGFLSW+ WR
Sbjct: 331 K-GPVYGETTAVQQLAPEFRYRHLGSMATVGGHSAVLEL-GDAQRRQLSLAGFLSWVAWR 388
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
SAYLTR+ S R VA +W T +FGRD+SR
Sbjct: 389 SAYLTRLGSLPKRLAVAFDWTVTMLFGRDLSR 420
>gi|159481670|ref|XP_001698901.1| mitochondrial type-II NADH dehydrogenase [Chlamydomonas
reinhardtii]
gi|158273393|gb|EDO99183.1| mitochondrial type-II NADH dehydrogenase [Chlamydomonas
reinhardtii]
Length = 497
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/361 (46%), Positives = 229/361 (63%), Gaps = 25/361 (6%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V + T R+++ F + YDKL I G++ STFGI GV ENA FLR+V A IR+K
Sbjct: 149 VDAASRTVTCRSVDGLDFSVQYDKLAICTGSQGSTFGIPGVLENAHFLRDVKQADAIRQK 208
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
L+ N+ L+ VPG ++E SRLLH V+VGGGPTGVE +GEL+DFI +V D +
Sbjct: 209 LIENIALAGVPGRQQDEFSRLLHIVIVGGGPTGVEVAGELTDFISHEV------CVD-VR 261
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
VTL+EA E+L SFD LR YA +L + GV L +GIV +V ++++L DGT +PYGL +W
Sbjct: 262 VTLVEARELLGSFDASLREYAARKLIQGGVLLRKGIVHEVTPREVVLKDGTVLPYGLCIW 321
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLR--VPS------VQDVFAVGDCSGYLESTGK 234
STGVGP+ SL K+ GRI +D+++R PS V V+A+GD +
Sbjct: 322 STGVGPTPFSLSLPFAKTAVGRIAVDKYMRSDTPSTAGLAPVPHVYALGDVCANPDKP-- 379
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP----FVYRHLGSMATIG 290
LPALAQVAE+QG+YL +LN + + G + G P FVYR LG+MAT+G
Sbjct: 380 --LPALAQVAEQQGRYLARVLNELAR-GPPHVGGRQGRGGGVPQHTEFVYRQLGAMATVG 436
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+ A+++L + + LSLAGFLSW+ WRSAYLTR+ S R VA +W+ T +FGRD+S
Sbjct: 437 GHSAVLEL-GDAGRRHLSLAGFLSWVAWRSAYLTRLGSIPKRLAVAFDWSITMIFGRDLS 495
Query: 351 R 351
R
Sbjct: 496 R 496
>gi|156372827|ref|XP_001629237.1| predicted protein [Nematostella vectensis]
gi|156216232|gb|EDO37174.1| predicted protein [Nematostella vectensis]
Length = 438
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 220/342 (64%), Gaps = 22/342 (6%)
Query: 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 73
TL F I YDKLVI +GA ++TFG+ GV E+A FL+E+ A++IR ++L N L+ P
Sbjct: 116 TLNGQLFDIIYDKLVIGVGAVSNTFGVPGVYEHAYFLKELADARKIRNQILKNFELAMQP 175
Query: 74 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 133
G+SE EK RLLH V+VGGGPTGVEF EL DF+ +DV + Y H + + VTLIEA +IL
Sbjct: 176 GVSEAEKKRLLHFVIVGGGPTGVEFGAELYDFMKQDVTRLYPHERGEVRVTLIEARQILP 235
Query: 134 SFDDRLRHYATTQL-SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
SFD++LR +A ++ + +L++ V V+ +IL DG+E+P GL+VWSTG+ P +
Sbjct: 236 SFDEKLRRFAEKKMRQRDQFKLLQHSVTKVNKDSIILEDGSEIPCGLVVWSTGLAPRSFT 295
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQD--VFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
SLDLPK+ ++ +D+ LRV ++ D +FA+GDCS S P AQVAERQG Y
Sbjct: 296 ASLDLPKNKAQQLLVDDHLRVKNIPDNTIFAIGDCS----SIETAPHPCTAQVAERQGLY 351
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
L N +G G+ + K PF ++++G +A +G Y+ L +L K L
Sbjct: 352 ---LANSLGLYSQGKGSDVK------PFSWKNMGMLAYLGDYQGLAELPAGK------LQ 396
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
GF SW++WRS YLT++ +WR RF V +WA TFVFGRD+S+
Sbjct: 397 GFKSWILWRSVYLTKLGNWRARFQVPFDWARTFVFGRDVSQF 438
>gi|307110626|gb|EFN58862.1| hypothetical protein CHLNCDRAFT_140737 [Chlorella variabilis]
Length = 520
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/376 (46%), Positives = 229/376 (60%), Gaps = 56/376 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKL I+ G++ STFGI GV++ FLR+ H+ IR L+ N +++PG S
Sbjct: 157 RFFVEYDKLAISTGSQGSTFGIPGVEQYTHFLRDASHSTAIRSTLVDNWNKANIPGRSPL 216
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 138
++ RLLH VVVGGGPTGVEF+GEL+DFI RD+R+ + +TLIEANE+L SFD R
Sbjct: 217 DRDRLLHVVVVGGGPTGVEFAGELADFINRDLRKIDPSRARDMRITLIEANELLGSFDAR 276
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
LR Y +L K GV+LV+G+VK+V +L L DG+ +P+GL VWSTGVGP+ SL
Sbjct: 277 LREYTARKLVKEGVQLVKGVVKEVTEGELELQDGSRIPFGLCVWSTGVGPTPFTVSLPFA 336
Query: 199 KSPGGRIGIDEWLRV---PSVQ-------------------------------------- 217
K+P GR+ ID+ LRV P +Q
Sbjct: 337 KTPRGRLAIDDKLRVLMAPRLQPDGHVQADADRGPGPQQVSEVHMRQDEEDASLHKDWKP 396
Query: 218 --DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG 275
+V+A+GDC + T LPALAQVAE+QGKYL LN +AG A
Sbjct: 397 VGNVYALGDCC----ANPDTPLPALAQVAEQQGKYLARCLNE--EAGKLEAPQLP----- 445
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
PFVY+HLGSMA+IG A+++L + K+ K LS AGF SW+ WRSAYLTR+ + ++R YV
Sbjct: 446 -PFVYKHLGSMASIGGASAVIELGEAKQRK-LSWAGFSSWVAWRSAYLTRLGTMKHRMYV 503
Query: 336 AVNWATTFVFGRDISR 351
A +WA T +FGRDISR
Sbjct: 504 AGDWALTLLFGRDISR 519
>gi|449685240|ref|XP_002156851.2| PREDICTED: probable NADH dehydrogenase-like [Hydra magnipapillata]
Length = 422
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 213/335 (63%), Gaps = 18/335 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
++ +SYDK+VI +GA ++TFGI GV + A FL+E+ A++IR +++ N S P ++EE
Sbjct: 105 EYTLSYDKVVIGVGAVSNTFGIPGVPKYAYFLKEIADARKIRNQIISNFEQSLFPYVNEE 164
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 138
E+ LLH V+VGGGPTG+EF EL DFI DV + + K+ +HVTL+E + IL SFD R
Sbjct: 165 ERLSLLHFVIVGGGPTGIEFGAELYDFITHDVARLFPGEKNDVHVTLVEGDSILPSFDQR 224
Query: 139 LRHYATTQLS-KSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR +A +++ + L++ V +V + L G + L+VWSTG+GP ++SLDL
Sbjct: 225 LRKFAERKITQRENFHLIKDFVVEVGENYVKLKSGKVLLTKLVVWSTGLGPRKFIESLDL 284
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
PK ++ +D+ LRV +FA+GDCS Y++ + LP+ AQVAERQG+Y+ L+
Sbjct: 285 PKGKSKQLKVDDHLRVVGYDSIFAIGDCS-YIDGSP---LPSTAQVAERQGRYVAQYLSL 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ NS D + PF++ + G +A IG YKA+ DL +K + GF SWL+
Sbjct: 341 L------ETNSKTDSK---PFMWSNAGMLAYIGGYKAVADL----PTKAGKITGFKSWLI 387
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRS YLTR+ SWRNR V +WA TF FGRDISR
Sbjct: 388 WRSVYLTRLGSWRNRMQVPFDWARTFFFGRDISRF 422
>gi|196011808|ref|XP_002115767.1| hypothetical protein TRIADDRAFT_2088 [Trichoplax adhaerens]
gi|190581543|gb|EDV21619.1| hypothetical protein TRIADDRAFT_2088, partial [Trichoplax
adhaerens]
Length = 407
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 209/336 (62%), Gaps = 26/336 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+++ Y+KL I +GA +TFG+ GV E+A FL+E+ A+ IR ++L N LS I +E+
Sbjct: 95 YELKYNKLAICVGAVPNTFGVPGVYEHAYFLKEIADARAIRHRILRNFELSTESVIKDED 154
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
+ RLLH V+VGGGPTGVEF EL DFI++DV + + +++ +HVTL+E+ EIL SFDDRL
Sbjct: 155 RKRLLHTVIVGGGPTGVEFGAELYDFIIQDVAKIFPSLQNMVHVTLVESREILPSFDDRL 214
Query: 140 RHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
R +A ++ K ++L+RG V +V+ + L DGT + GL VWS G+ P L LDLP
Sbjct: 215 RAHAEKKIGKRERMKLLRGTVAEVNHDGIKLTDGTNIQCGLTVWSAGLAPRELTTRLDLP 274
Query: 199 KSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
K+ G++ +D +L V+ V+A+GDCS YL+ST LP AQVAER+GKYL +L+
Sbjct: 275 KTKQGQVIVDNYLHTIKQDVEGVYALGDCS-YLQSTP---LPCTAQVAEREGKYLAKVLS 330
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
A PF ++ LG +A +G +L DL K GF SW+
Sbjct: 331 SSQSA-------------PKPFFFKSLGMLAYVGEQDSLTDLPYVK------WQGFKSWI 371
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W AY TR+ SWR R V ++W TF++GRDISR
Sbjct: 372 LWHLAYTTRLGSWRLRMQVPIDWFKTFIYGRDISRF 407
>gi|154346482|ref|XP_001569178.1| putative NADH dehydrogenase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066520|emb|CAM44317.1| putative NADH dehydrogenase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 527
Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 209/337 (62%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F +SYD L++A GA+ +TF I GV+E A FLREV A+ IR++L+ N+M +++P S EE
Sbjct: 117 FSVSYDYLIMAHGAKPNTFNIPGVEERAFFLREVTEARGIRKRLVQNIMAANLPTTSIEE 176
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTG+EF+ L+DF D++ + + + VT++EA E+L SFD L
Sbjct: 177 AKRLLHTVVVGGGPTGIEFAANLADFFREDIKNVNTSLLPHCKVTVLEAGEVLGSFDATL 236
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R Y +L + GV + + V +V +++ G +P GL+VWSTGVG + K+L K
Sbjct: 237 RRYGQLRLKQLGVEIRKTAVVNVTDKQVFTKSGEVLPTGLVVWSTGVGSGPITKALKCDK 296
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + +VFA GDC+ ++ + LP LA VA RQG+Y+ +
Sbjct: 297 TSHGRISIDDHLRVLRDSKPIPNVFAAGDCA----ASNEKPLPTLAAVASRQGRYIGKEI 352
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N N K ++ PFVYR LGSMA+IG + A+V L E L L G+ +
Sbjct: 353 N----------NLLKGKQMTKPFVYRSLGSMASIGSHSAIVSL---GEKLKLDLNGYAAL 399
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 400 WVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|384250625|gb|EIE24104.1| mitochondrial type-II NADH dehydrogenase [Coccomyxa subellipsoidea
C-169]
Length = 493
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 213/341 (62%), Gaps = 25/341 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + +D L IA G++ STFGI GV+++A FLR+V +A IR L+ N +++P +++
Sbjct: 167 EFDVKFDMLAIATGSQGSTFGIPGVEQHAHFLRDVSNATHIRNHLIANWNKANLPTRTQK 226
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 138
E+SRLL VVVGGGPTGVEF+GELS FI R I ++L+E ++L SFD R
Sbjct: 227 ERSRLLQIVVVGGGPTGVEFAGELSSFISTRARD--------IRISLVEGAQLLGSFDVR 278
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
LR YA +L G+ L++ +VK+V +LIL +G +PYGL VWSTGVGP+ SL
Sbjct: 279 LREYAARKLHNQGIHLIKVMVKEVKETELILQNGDVIPYGLCVWSTGVGPTDFTTSLPFA 338
Query: 199 KSPGGRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
K+ GRI +D+ L + ++FA+GDC E LPALAQVAE+QG
Sbjct: 339 KTARGRIAVDDCLHAGDKSSNDDFEPLHNIFALGDCCANKEH----ALPALAQVAEQQGM 394
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
YL LN KA G+ + + PF Y HLGSMA +G+ A+V+L + + +GLSL
Sbjct: 395 YLAKQLNAAAKARVGKEEAPQ----WKPFEYHHLGSMALVGKGSAIVELGDHSKGRGLSL 450
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
GF SWL WRSAYLTR+ + RNR YV ++W +FGRD+S
Sbjct: 451 TGFKSWLAWRSAYLTRLGNVRNRLYVMLDWTIALLFGRDVS 491
>gi|340371335|ref|XP_003384201.1| PREDICTED: probable NADH dehydrogenase-like [Amphimedon
queenslandica]
Length = 437
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 218/351 (62%), Gaps = 24/351 (6%)
Query: 4 HCETVTDELRTLEP-WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
H + V L+P + +SYD LVI +GA +STF I GV E+A FL+E+ A+EIR++
Sbjct: 109 HAQKVVQCRSALDPSMTYPVSYDILVIGVGANSSTFNIPGVNEHALFLKEIQDAREIRKR 168
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
+L N L+ P +SEEEK RLLH VVVGGGPTGVEFS E DF+ +D+ + Y + +H
Sbjct: 169 ILTNFELATQPLVSEEEKRRLLHFVVVGGGPTGVEFSAEFYDFLQQDLERLYPDERSTVH 228
Query: 123 VTLIEANEILSSFDDRLRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
+TLIEANEILSSFD +LR Y + K +++++ V +V + L+DG+ +P G++V
Sbjct: 229 ITLIEANEILSSFDTKLRSYTEKIIKKRERMQILKASVTEVTDTGITLSDGSVMPCGMVV 288
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
WS G+ P + V L++ K+ G+I +DE+L++PS+ V+A+GDC+ + + +P A
Sbjct: 289 WSAGLAPRSFVNDLNVDKNSRGQILVDEYLKLPSLDSVYAIGDCASVIGND----MPCTA 344
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
QVAE+QG+YL L+R K PFV++ G +A IG Y+AL D
Sbjct: 345 QVAEKQGRYLAKALSR------------KASTPPPPFVFKQTGMLAYIGDYRALADTSVG 392
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K G+ SW++WRSAY T++ SWR R V ++W TF FGRD SR
Sbjct: 393 KSQ------GYASWILWRSAYSTKLGSWRLRMQVPMDWMKTFFFGRDTSRF 437
>gi|198427647|ref|XP_002122465.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 472
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 208/338 (61%), Gaps = 28/338 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ + YDKLVI +GA ++TFGI GVKE+A FL+E+ A+ IR +++ N L++ PG E
Sbjct: 158 YDLKYDKLVIGVGAVSNTFGIPGVKEHAFFLKELSDARGIRDRIISNFELANQPGSDEAT 217
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEANEILSSFDDR 138
+ +LLH V+VGGGPTGVEF EL DF+ DV + YS ++ + VTLIEAN+IL SFD R
Sbjct: 218 QDQLLHIVIVGGGPTGVEFGAELYDFLREDVARLYSTGLQQKVKVTLIEANKILGSFDKR 277
Query: 139 LRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR YA ++ K +++G+V V + L DGT++P GL+VWSTG+ P V+ L
Sbjct: 278 LREYAEKKIIKRKQFEILQGVVAKVTRNNVHLKDGTKIPCGLVVWSTGLSPRPFVQQLTF 337
Query: 198 PKSPGGRIGIDEWLRVPSVQD---VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
K G I + L+VP V D VF++GDC+ LPA AQVAER+GK+L
Sbjct: 338 RKDKYGHIMTNRKLQVPDVDDEHSVFSLGDCA----DIEGMPLPATAQVAERKGKWLAEY 393
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
LN ++++D F + +LG +A +G Y L D + K L GF +
Sbjct: 394 LN---------GDTSED------FQFSNLGMLAYVGGYSGLSDFK----PKLFKLTGFHA 434
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W VWRSAYLT++ SW++RF V ++W T +FGRDISR
Sbjct: 435 WFVWRSAYLTKLGSWKSRFQVPMDWLKTLIFGRDISRF 472
>gi|440793246|gb|ELR14434.1| NADH dehydrogenase, putative [Acanthamoeba castellanii str. Neff]
Length = 473
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 214/354 (60%), Gaps = 26/354 (7%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V+ E TDE + P I YD+LVIA+GA +TFG+ GV++ FL+ V A+ IR++
Sbjct: 142 VYEERETDEEVPVHPAA-SIKYDELVIAVGAAPNTFGVPGVEKYCYFLKSVADARNIRQR 200
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
++ + P +E E+SRLLH V+VGGGPT VEFS EL DF+ +DV + Y ++ +
Sbjct: 201 IIECFERASSPTTTEAERSRLLHFVIVGGGPTSVEFSAELHDFLRKDVHKIYPDLEKQVQ 260
Query: 123 VTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLL 180
+TLIEA + +LS+FD RL Y K + + + VK V +++L+DG +P+GL
Sbjct: 261 ITLIEAGKTLLSTFDQRLSDYTMRTFRKRNIDVRTSVSVKQVKRHEMVLSDGAVIPFGLG 320
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLP 238
VWSTG+ P +K L PK GR+ +DE+L V P V+ V+AVGDC+ + + LP
Sbjct: 321 VWSTGLSPIPFIKGLPFPKDRSGRLLVDEYLHVKAPGVEGVYAVGDCAAFETNP----LP 376
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
A AQ AE++GKYL LN KA G E F Y H G +A +G Y+AL+D
Sbjct: 377 ATAQGAEQEGKYLAQALN--AKARG---------EEPKKFQYHHKGMLAYVGGYRALID- 424
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
S + +GFL+W++W +AY+T++VS +N+ + + W +FVFGRDISR
Sbjct: 425 -----SPLIKRSGFLTWIMWNAAYITKLVSIKNKMMIPMYWFKSFVFGRDISRF 473
>gi|320163103|gb|EFW40002.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 457
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 211/350 (60%), Gaps = 25/350 (7%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
C++ D +K+ + YD LV+ +G +TF I GV + FL+E+ A+ IR LL
Sbjct: 131 CQSALDA-----SYKYSVHYDTLVLGVGMRPNTFNIEGVTKYGHFLKELADARAIRVHLL 185
Query: 65 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 124
NL L+ PG+S EE+ RLL V+ GGG TGVEF EL DF+++D+ + Y H++D+I +
Sbjct: 186 RNLELACEPGVSAEERQRLLTVVIAGGGATGVEFGAELHDFLVQDLPKLYPHLQDHIRIV 245
Query: 125 LIEANEILSSFDDRLRHYATTQL-SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWS 183
L+E N+IL +FD RLR +A ++ + + +VR + DV + + DGT P+G+LVW
Sbjct: 246 LVEPNDILGAFDSRLRTFAERKIRQRRDMTIVRKFIVDVTEKNVHFKDGTTHPFGVLVWV 305
Query: 184 TGVGPSTLVKSL-DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
TG+ PS L SL PK+ + +D+ LRV + +V+A+GDC+ + LP AQ
Sbjct: 306 TGLAPSPLAVSLSQFPKNKQHQFVVDQQLRVTGIPNVYALGDCAAMTPA-----LPCTAQ 360
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VAERQG+YL S+L+ +G A++ PFV++ +G MA +G + A+ DL K
Sbjct: 361 VAERQGRYLASVLSNLGSDSAAVASAP-------PFVFKSMGMMAYVGDHDAISDLPVTK 413
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L+G ++W +W SAYLTR+ +WR R V +W + +FGRDISR
Sbjct: 414 ------LSGIMAWWLWFSAYLTRLGAWRLRLQVPFDWFRSRLFGRDISRF 457
>gi|401420816|ref|XP_003874897.1| putative NADH dehydrogenase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491133|emb|CBZ26398.1| putative NADH dehydrogenase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 524
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 205/337 (60%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD L++A GA +TF I GV+E A FLREV+ A+ IR++L+ N+M +++P S E
Sbjct: 117 FSVPYDYLIMAYGARPNTFNIPGVEEKAFFLREVNEARGIRKRLVQNIMTANLPTTSIAE 176
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTG+EF+ L++F D++ + + Y VT++EA E+L SFD L
Sbjct: 177 AKRLLHTVVVGGGPTGIEFAANLAEFFREDIKNVNTSLLPYCKVTVLEAGEVLGSFDTAL 236
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R Y +L++ GV + + V V +++ G +P GL+VWSTGVG + K+L+ K
Sbjct: 237 RRYGQLRLNQLGVEIRKTAVVGVTDEEVFTKSGEVLPTGLVVWSTGVGSCPVTKALNCDK 296
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + +VFA GDC+ ++ + LP LA VA RQG+Y+ +
Sbjct: 297 TNRGRISIDDHLRVLRDGKPILNVFAAGDCA----ASNERPLPTLAAVASRQGRYIGKEM 352
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N N K ++ PF YR LGSMA+IG A+V L + L GF +
Sbjct: 353 N----------NLLKGKQMSKPFAYRSLGSMASIGNRSAIVSLGNKFK---FDLNGFTAL 399
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 400 WVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|146104827|ref|XP_001469921.1| putative NADH dehydrogenase [Leishmania infantum JPCM5]
gi|134074291|emb|CAM73037.1| putative NADH dehydrogenase [Leishmania infantum JPCM5]
Length = 527
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 204/337 (60%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD L++A GA +TF I GV+E A FLREV+ A+ IR++L+ N+M +++P S E
Sbjct: 117 FSVPYDYLIMAYGARPNTFNIPGVEEKAFFLREVNEARGIRKRLVQNIMTANLPTTSIAE 176
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTG+EF+ L++F D++ + + Y VT++EA E+L SFD L
Sbjct: 177 AKRLLHTVVVGGGPTGIEFAANLAEFFREDIKNVNTSLLPYCKVTVLEAGEVLGSFDTAL 236
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R Y +L++ GV + + V V +++ G +P GL+VWSTGVG + K+L K
Sbjct: 237 RRYGQLRLNQLGVEIRKTAVVGVTDEEVFTKSGEVLPTGLVVWSTGVGSGPVTKALKCDK 296
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + +VFA GDC+ ++ + LP LA VA RQG+Y+ +
Sbjct: 297 TNRGRISIDDHLRVLRDGKPIPNVFAAGDCA----ASNERPLPTLAAVASRQGRYIGKEM 352
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N N K ++ PFVYR LGSMA+IG A+V L + L G +
Sbjct: 353 N----------NLLKGKQMSRPFVYRSLGSMASIGNRSAIVSL---GDKFKFDLNGCAAL 399
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 400 WVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|398025028|ref|XP_003865675.1| NADH dehydrogenase, putative [Leishmania donovani]
gi|322503912|emb|CBZ38998.1| NADH dehydrogenase, putative [Leishmania donovani]
Length = 527
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 204/337 (60%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD L++A GA +TF I GV+E A FLREV+ A+ IR++L+ N+M +++P S E
Sbjct: 117 FSVPYDYLIMAYGARPNTFNIPGVEEKAFFLREVNEARGIRKRLVQNIMTANLPTTSIAE 176
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTG+EF+ L++F D++ + + Y VT++EA E+L SFD L
Sbjct: 177 AKRLLHTVVVGGGPTGIEFAANLAEFFREDIKNVNTSLLPYCKVTVLEAGEVLGSFDTAL 236
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R Y +L++ GV + + V V +++ G +P GL+VWSTGVG + K+L K
Sbjct: 237 RRYGQLRLNQLGVEIRKTAVVGVTDEEVFTKSGEVLPTGLVVWSTGVGSGPVTKALKCDK 296
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + +VFA GDC+ ++ + LP LA VA RQG+Y+ +
Sbjct: 297 TNRGRISIDDHLRVLRDGKPIPNVFAAGDCA----ASNERPLPTLAAVASRQGRYIGKEM 352
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N N K ++ PFVYR LGSMA+IG A+V L + L G +
Sbjct: 353 N----------NLLKGKQMSRPFVYRSLGSMASIGNRSAIVSL---GDKFKFDLNGCAAL 399
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 400 WVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|348674320|gb|EGZ14139.1| hypothetical protein PHYSODRAFT_316979 [Phytophthora sojae]
Length = 481
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 215/350 (61%), Gaps = 33/350 (9%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
++ I YD LV+A G+ TFG+ GV+E+A FL+E+HHAQ+IR ++L N ++ PG++ E
Sbjct: 149 EYPIKYDTLVLACGSRPLTFGLPGVEEHAFFLKEIHHAQKIRNRILENFEVATQPGVTPE 208
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 138
E+ RLLH VVVGGGPTG+EF EL D +++D+R Y V Y+ VTL+++ EILS FD +
Sbjct: 209 ERERLLHFVVVGGGPTGIEFCAELYDLVLQDLRHMYPDVSKYLGVTLLDSGEILSGFDKQ 268
Query: 139 LRHYATTQL-SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR A +++ S+S +R+++ +V + + L G ++P GL+VW+ GVGP+ L KSL +
Sbjct: 269 LRTVALSKIESRSSMRIIKKNCIEVTADGVTLEGGEKLPAGLVVWTAGVGPNALTKSLTV 328
Query: 198 -PKSPGGRIGIDEWLRV--------------PSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
KS G I +++ +V P +VF++GDC+ L+ LPA AQ
Sbjct: 329 FEKSRRGNILTNQYCQVLGAAEVETEAPLGMPRRSNVFSIGDCAEILDYP----LPATAQ 384
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
A+ Q YL +LL G A AK P+ +R G +A +G Y+ L + R +
Sbjct: 385 KAQTQADYLTALLR------GKNAAPAK------PYTFRSKGMVAYLGSYQGLFEARPRE 432
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++K ++L G+ +W +WRSAYLT++ SWR R V ++W + GRD+SR
Sbjct: 433 DNK-ITLTGWQAWFLWRSAYLTKLGSWRLRLQVPLDWLKAILVGRDVSRF 481
>gi|157877617|ref|XP_001687125.1| putative NADH dehydrogenase [Leishmania major strain Friedlin]
gi|68130200|emb|CAJ09511.1| putative NADH dehydrogenase [Leishmania major strain Friedlin]
Length = 527
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 203/337 (60%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD L++A GA +TF I GV++ A FLREV+ A+ IR++L+ N+M +++P S E
Sbjct: 117 FSVPYDYLIMAYGARPNTFNIPGVEDKAFFLREVNEARGIRKRLVQNIMTANLPTTSIAE 176
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTG+EF+ L++F D++ + + Y VT++EA E+L SFD+ L
Sbjct: 177 AKRLLHTVVVGGGPTGIEFAANLAEFFREDIKNVNTSLLPYCKVTVLEAGEVLGSFDNAL 236
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R Y +L++ GV + + V V +++ G +P GL+VWSTGVG + K+L K
Sbjct: 237 RRYGQLRLNQLGVEIRKTAVVGVTDEEVFTKSGEVLPTGLVVWSTGVGSGPVTKALKCDK 296
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + +VFA GDC+ E LP LA VA RQG+Y
Sbjct: 297 TNRGRISIDDHLRVLRDGKPIPNVFAAGDCAANNERP----LPTLAAVASRQGRY----- 347
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
IGK N K ++ PFVYR LGSMA+IG A+V L + L G +
Sbjct: 348 --IGKETN---NLLKGKQMSKPFVYRSLGSMASIGNRTAIVSL---GDKFKFDLNGCAAL 399
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 400 WVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|405968830|gb|EKC33859.1| Putative NADH dehydrogenase [Crassostrea gigas]
Length = 418
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 219/353 (62%), Gaps = 50/353 (14%)
Query: 3 VHCETVTDELRTLEP-WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+HCE+V L+P + +++DKLVIA+GA ++TF + GV+E+A FL+++ A++IR
Sbjct: 112 LHCESV------LQPQLGYTVNFDKLVIAVGARSNTFNVPGVEEHAFFLKDIPDARKIRS 165
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+++ N+ LS PG+SE E+ +LL+ V+VGGGPTGVEF EL D+I +DV + Y KD +
Sbjct: 166 RIIRNIELSLHPGLSESERKQLLNFVIVGGGPTGVEFGAELYDWIEQDVARVYHQRKDQV 225
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
HVTL+E+N+ILSSFD+ LR YA + V S + L++G ++P GL+V
Sbjct: 226 HVTLVESNQILSSFDESLRKYA----------------EKVTSDCVKLSNGEDLPCGLVV 269
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPA 239
WSTG+ P+ VKSL + K+ G+I D+ L V +V+A+GDC+ ++ LP
Sbjct: 270 WSTGLSPTQFVKSLGVDKNRNGQILTDKNLHVIGDPTNNVYALGDCADIRDNP----LPC 325
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
+AQVAERQG+YL +L KD + F ++ G +A IGRY+ + D+
Sbjct: 326 IAQVAERQGEYLANLF------------CGKDEK---EFTFQSKGMLAYIGRYQGVSDIP 370
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ + + G SW +WRSAYLT++ SWR R V ++W T +FGRDISR
Sbjct: 371 K------IKMQGISSWFLWRSAYLTKLGSWRLRMQVPMDWTKTILFGRDISRF 417
>gi|407410040|gb|EKF32628.1| NADH dehydrogenase, putative [Trypanosoma cruzi marinkellei]
Length = 512
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 213/337 (63%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I YDKL++A GA +TF + GV +NA FLREV+ A+ IR++L+ N+M++D+P EE
Sbjct: 116 FNIKYDKLILAHGARPNTFNVPGVMDNAFFLREVNEARGIRKRLVQNIMVADLPTTDMEE 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTGVEF+ ++DF DVR+ + ++ VT++EA E+ FD R+
Sbjct: 176 AKRLLHVVVVGGGPTGVEFAATVADFFRDDVRKINHKLVEFCKVTVLEAGEVFGMFDLRV 235
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R++ +L GVR+V+G V V+ ++++ DG +P GL+VWSTGVGPS+L K LD+ +
Sbjct: 236 RNWGKRRLDALGVRIVKGAVVAVNKKEVVTKDGIVIPTGLVVWSTGVGPSSLTKDLDVDR 295
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + DVFA+GDC+ + K LP LA VA RQG +L +
Sbjct: 296 TSRGRISIDDHLRVLRKGAPMPDVFAIGDCA----ANEKLPLPTLAAVASRQGVFLAKKV 351
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N G ++ ME PF YR LGSM ++G ALV+L N SK G +
Sbjct: 352 N-------GELSNKPVME---PFEYRSLGSMVSLGDNAALVEL--NVPSK-FDFVGLKAL 398
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRSAYL+ + SWRN+ YV VNW + +FGRD + I
Sbjct: 399 FFWRSAYLSILGSWRNKLYVLVNWVGSAIFGRDTTFI 435
>gi|340057621|emb|CCC51967.1| putative NADH dehydrogenase [Trypanosoma vivax Y486]
Length = 471
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 223/357 (62%), Gaps = 23/357 (6%)
Query: 2 KVHCETV-TDELRTLEPWK-FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 59
+V+C +V + + ++ P F +SYDKLV+A GA+ STFG+ G E+A FLREV+ A+ I
Sbjct: 96 EVNCVSVGSANITSMAPVSTFTVSYDKLVLAHGAQPSTFGVPGAVEHALFLREVNEARSI 155
Query: 60 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 119
R++L+ N+M +++ +E E RLLH VVVGGGPTGVEF+ L+DF+ D+++ +
Sbjct: 156 RKQLVQNIMTANLEITTESEMKRLLHTVVVGGGPTGVEFAASLADFVRDDLKKISPDLVP 215
Query: 120 YIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGL 179
Y VT++EA E+ S+FD R+R + +L GVR+V+G V V+ +++ DG P GL
Sbjct: 216 YAQVTVLEAGEVFSNFDLRVRAWGKRRLESMGVRIVKGSVVCVEKDEVVTKDGEHFPCGL 275
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKT 235
+VWSTGVGPS L K LD+ ++ GGRI I+E L+V + DV+A+GDC+ ++
Sbjct: 276 VVWSTGVGPSQLTKDLDVDRAAGGRIAINEQLQVLRGGKPIPDVYALGDCAANVQCP--- 332
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
LP LA VA RQG YL + N + + P+ Y LGSMA++G A+
Sbjct: 333 -LPTLAAVASRQGTYLANKFNL----------ELANKKFDAPYRYESLGSMASLGNSGAV 381
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
V+L ++ + + G + WRSAYL+ + SWRN+ YV VNW + +FGRD++ I
Sbjct: 382 VELNTRRK---VDIVGLKALYFWRSAYLSILGSWRNKLYVVVNWVGSALFGRDVTFI 435
>gi|407849488|gb|EKG04215.1| NADH dehydrogenase, putative [Trypanosoma cruzi]
Length = 512
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 211/337 (62%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I YDKL++A GA +TF + GV +NA FLREV+ A+ IR++L+ N+M++D+P EE
Sbjct: 116 FNIKYDKLILAHGARPNTFNVPGVMDNAFFLREVNEARGIRKRLVQNIMVADLPTTDLEE 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTGVEF+ ++DF DVR+ + ++ VT++EA E+ FD R+
Sbjct: 176 AKRLLHVVVVGGGPTGVEFAATVADFFRDDVRKINHKLVEFCKVTVLEAGEVFGMFDLRV 235
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R++ +L GVR+V+G V V++++++ DG + GL+VWSTGVGPS+L K LD+ +
Sbjct: 236 RNWGKRRLDALGVRIVKGAVVTVNNKEVVTKDGIVIRTGLVVWSTGVGPSSLTKDLDVDR 295
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + DVFA+GDC+ + K LP LA VA RQG YL
Sbjct: 296 TSRGRISIDDHLRVLRKGAPISDVFAIGDCA----ANEKLPLPTLAAVASRQGAYLAK-- 349
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
K G +N + PF YR LGSM ++G ALV+L N SK G +
Sbjct: 350 ----KVNGELSNKP----IMAPFEYRSLGSMVSLGDNAALVEL--NVPSK-FDFVGLKAL 398
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRSAYL+ + SWRN+ YV VNW + +FGRD + I
Sbjct: 399 FFWRSAYLSILGSWRNKLYVLVNWVGSAIFGRDTTFI 435
>gi|71422638|ref|XP_812197.1| NADH dehydrogenase [Trypanosoma cruzi strain CL Brener]
gi|70876950|gb|EAN90346.1| NADH dehydrogenase, putative [Trypanosoma cruzi]
Length = 512
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 212/337 (62%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I YDKL++A GA +TF + GV +NA FLREV+ A+ IR++L+ N+M++D+P EE
Sbjct: 116 FNIKYDKLILAHGARPNTFNVPGVMDNAFFLREVNEARGIRKRLVQNIMVADLPTTDLEE 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTGVEF+ ++DF DVR+ + ++ VT++EA E+ FD R+
Sbjct: 176 AKRLLHVVVVGGGPTGVEFAATVADFFRDDVRKINHKLVEFCKVTVLEAGEVFGMFDLRV 235
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R++ +L GVR+V+G V V++++++ DG + GL+VWSTGVGPS+L K LD+ +
Sbjct: 236 RNWGKRRLDALGVRIVKGAVVAVNNKEVVTKDGIVIRTGLVVWSTGVGPSSLTKDLDVDR 295
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + DVFA+GDC+ + K LP LA VA RQG YL +
Sbjct: 296 TSRGRISIDDHLRVLRKGAPIPDVFAIGDCA----ANEKLPLPTLAAVASRQGAYLAKKV 351
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N G ++ M PF YR LGSM ++G A+V+L N SK G +
Sbjct: 352 N-------GELSNKPIMA---PFEYRSLGSMVSLGDNAAIVEL--NVPSK-FDFVGLKAL 398
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRSAYL+ + SWRN+ YV VNW + VFGRD + I
Sbjct: 399 FFWRSAYLSILGSWRNKLYVLVNWVGSAVFGRDTTFI 435
>gi|443726586|gb|ELU13705.1| hypothetical protein CAPTEDRAFT_169172 [Capitella teleta]
Length = 438
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 209/354 (59%), Gaps = 31/354 (8%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
VHC++ + T + +SYD LVI +GA ++TFG+ GV E+A FL+EV A+ IR +
Sbjct: 112 VHCQSALKKELT-----YSLSYDALVIGVGALSNTFGVPGVTEHAFFLKEVADARRIRNQ 166
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYI 121
LL N L+ P ++EEEK RLLH V+VGGGPTGVEF EL DF +DV + + +
Sbjct: 167 LLSNFELALQPDLAEEEKKRLLHTVIVGGGPTGVEFGAELYDFFEQDVSRLFGKDEQTKS 226
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSG-VRLVRGIVKDVDSQKLILNDGTEVPYGLL 180
VTL+E+N+IL SFD RL+ YA ++S+ L++ V +V + + L DG +P GL+
Sbjct: 227 RVTLVESNKILGSFDGRLQKYAEKKISQRDRFTLLKSSVTEVGADYVKLQDGEVLPCGLV 286
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLP 238
VWSTG+ P + L + K+ G+I D LRV S + VFA+GDC+ E LP
Sbjct: 287 VWSTGLSPRWFTQQLAVTKNERGQILTDAHLRVKDASPETVFAIGDCADIEEQP----LP 342
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
AQVAERQG+YL L + +++ F ++ G +A IG Y+ L D
Sbjct: 343 CTAQVAERQGRYLAQRL------------AIDNVQKRTSFEFKSSGMLAYIGGYEGLTD- 389
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + GF SW +WRSAYLT++ SWR R V ++W T +FGRD+SR
Sbjct: 390 -----TPDLKVQGFPSWFLWRSAYLTQLGSWRLRMQVPLDWTKTILFGRDVSRF 438
>gi|71418977|ref|XP_811027.1| NADH dehydrogenase [Trypanosoma cruzi strain CL Brener]
gi|70875645|gb|EAN89176.1| NADH dehydrogenase, putative [Trypanosoma cruzi]
Length = 512
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 212/337 (62%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I YDKL++A GA +TF + GV +NA FLREV+ A+ IR++L+ N+M++D+P EE
Sbjct: 116 FNIKYDKLILAHGARPNTFNVPGVMDNAFFLREVNEARGIRKRLVQNIMVADLPTTDLEE 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
RLLH VVVGGGPTGVEF+ ++DF DVR+ + ++ VT++EA E+ FD R+
Sbjct: 176 AKRLLHVVVVGGGPTGVEFAATVADFFRDDVRKINHKLVEFCKVTVLEAGEVFGMFDLRV 235
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R++ +L GVR+V+G V V++++++ DG + GL+VWSTGVGPS+L K LD+ +
Sbjct: 236 RNWGKRRLDALGVRIVKGAVVAVNNKEVVTKDGIVIRTGLVVWSTGVGPSSLTKDLDVDR 295
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI ID+ LRV + DVFA+GDC+ + K LP LA VA RQG YL +
Sbjct: 296 TSRGRISIDDHLRVLRKGAPIPDVFAIGDCA----ANEKLPLPTLAAVASRQGVYLAKKV 351
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N G ++ M PF YR LGSM ++G ALV+L N +K G +
Sbjct: 352 N-------GELSNKPIMA---PFEYRSLGSMVSLGDNAALVEL--NVPTK-FDFVGLKAL 398
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRSAYL+ + SWRN+ YV VNW + VFGRD + I
Sbjct: 399 FFWRSAYLSILGSWRNKLYVLVNWVGSAVFGRDTTFI 435
>gi|281204519|gb|EFA78714.1| putative NADH dehydrogenase [Polysphondylium pallidum PN500]
Length = 461
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 213/357 (59%), Gaps = 32/357 (8%)
Query: 1 MKVHCETVTDELRTLEPWK-------FKISYDKLVIALGAEASTFGIHGVKENATFLREV 53
++ C + E +++E FKI YD L+I +GA +TF I GV++N+ FL+E+
Sbjct: 123 LQAECTKINHEEKSIECLSTLHHQTPFKIDYDYLIIGVGARNNTFNIPGVEKNSFFLKEL 182
Query: 54 HHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 113
H A+ IR++++ ++ +P ++ E+ +LL VV GGGPTGVEF GEL+D + D+ +
Sbjct: 183 HQARSIRQRIIYCFEMASLPDVTPAERRKLLSFVVCGGGPTGVEFCGELNDLVSEDISRW 242
Query: 114 YSHVK-DYIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN 170
+ +V + + +TL+EA++ ILS+FD L A SGV + VK+V +K+IL+
Sbjct: 243 FPNVPMNEVKITLLEASKSILSAFDQNLVKKALENFKASGVDVRTNSPVKEVHEEKVILS 302
Query: 171 DGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 230
DGTE+PYG+LVWSTGV P + SL PK GR+ +D++L + +++FA GDCS
Sbjct: 303 DGTEIPYGMLVWSTGVAPQKFINSLPFPKDKQGRLQVDQYLCLAGQKNIFAFGDCS---- 358
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIG 290
+ +T LPA AQVA++QG YL N NS K++E PFVY + G +A IG
Sbjct: 359 NVNETNLPATAQVAQQQGIYLAEQFN----------NSIKELE-SKPFVYHYFGILAYIG 407
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
R +L ++ + +G +W+ WRSAYLTR+ S R+ F + +N ++ R
Sbjct: 408 RKSSLF------QTNAVQASGLWAWIAWRSAYLTRLGSLRS-FNMELNKKQLYMLTR 457
>gi|328874155|gb|EGG22521.1| putative NADH dehydrogenase [Dictyostelium fasciculatum]
Length = 490
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 218/393 (55%), Gaps = 60/393 (15%)
Query: 1 MKVHCETVTDELRTLE-------PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREV 53
++ C TV E +T+E FK+ YD LVI +GA +TFGI GV E+A FL+E+
Sbjct: 117 LQAQCTTVDPETKTIECTSTLHDTTPFKLQYDYLVIGVGARNATFGIPGVSEHAHFLKEL 176
Query: 54 HHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 113
H A+ IR++++ + +P EE+ RLL ++VG GPTGVEF+ EL+D ++ D+ +
Sbjct: 177 HQARSIRQRIIYCFESASLPDCKPEERKRLLSTIIVGAGPTGVEFAAELNDLVIEDIAKL 236
Query: 114 YSHVK-DYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN 170
+ +V + I++T++EA N ILS+FD +L A + +G+ + IVK+V S ++IL
Sbjct: 237 FPNVPCNEINITILEASNRILSAFDSKLVDTAVKRFRTTGIDVRTNTIVKEVLSDEVILT 296
Query: 171 DGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSV-------------- 216
G +P+GLLVWSTG+G L + K GRI +D++LRV ++
Sbjct: 297 SGERIPFGLLVWSTGIGSHPFTDRLPMEKDKHGRIIVDDFLRVKNIFQNNNNNKTIESTS 356
Query: 217 -----------------QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
+++++ GDC+ LPA AQVA+++G YL N
Sbjct: 357 TTSTITTTATTKQQQQQENIYSFGDCAS--PQGNNNNLPATAQVAQQEGYYLAQQFN--- 411
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N A++ EL PFV+ LG MA IGR +L ++ + +GF +W+ WR
Sbjct: 412 -------NRAENKEL-QPFVFNFLGIMAYIGRMSSLF------QTNSVHASGFTAWVTWR 457
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
SAYLTR+ S R++ V +WA TF+FGRDIS
Sbjct: 458 SAYLTRLGSIRSKLQVPFDWARTFIFGRDISNF 490
>gi|342184562|emb|CCC94044.1| putative NADH dehydrogenase [Trypanosoma congolense IL3000]
Length = 494
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 207/338 (61%), Gaps = 21/338 (6%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LV+A GA+ +TF + G E A FLREV A+ IRR+L+ N+M + +P S +
Sbjct: 115 EFNVDYDMLVLAHGAQPNTFNVPGALERACFLREVSEARTIRRRLVQNIMTASLPVTSVQ 174
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 138
EK RLLH VVVGGGPTGVEFS +L++F+ DV+ + Y VT++EA E+ S FD R
Sbjct: 175 EKKRLLHTVVVGGGPTGVEFSADLAEFLRHDVKGINPELLQYCRVTVLEAGEVFSMFDLR 234
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+R + +L G+R+V+G V V ++++ DG P GL+VWSTGVGPSTL K + +
Sbjct: 235 VREWGKRRLDALGIRIVKGSVVAVKEKEVVTKDGGVFPAGLVVWSTGVGPSTLTKEIKVD 294
Query: 199 KSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
++P GRI ID +RV +QDV+A+GDC+ + LP LA VA RQG YL +
Sbjct: 295 RTPQGRISIDNHMRVLRNGSPIQDVYAIGDCA----ADSNNPLPCLAAVASRQGTYLAAK 350
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
N I AN+ PF Y+ LGSM ++G A+V L ++ + G +
Sbjct: 351 FNAI------LANAPHTT----PFQYKSLGSMVSLGTSSAVVQLNGRRK---VDFVGLKA 397
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRSAYL+ + SWRN+ Y+ VNW + +FGRD++ I
Sbjct: 398 LFFWRSAYLSMLGSWRNKLYIIVNWLGSALFGRDVTLI 435
>gi|71748224|ref|XP_823167.1| NADH dehydrogenase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832835|gb|EAN78339.1| NADH dehydrogenase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 491
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 204/337 (60%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLV+A GA+ +TF + G E A FLREV+ A+ IR++L+ N+M +++P S EE
Sbjct: 116 FDVQYDKLVLAHGAQPNTFNVPGAVERACFLREVNEARTIRKRLVQNIMTANLPVTSVEE 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
K RLLH VVVGGGPTGVEFS +L++F+ DV+ + + VT++EA E+ S+FD R+
Sbjct: 176 KKRLLHTVVVGGGPTGVEFSADLAEFLRDDVKNINPELVQFCKVTVLEAGEVFSTFDLRV 235
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R + +L GVR+V+G V V +++I G GL+VWSTGVGPS L K L + +
Sbjct: 236 REWGKRRLDALGVRIVKGNVVAVQEKEVITKSGEVFSTGLVVWSTGVGPSPLTKELKVDR 295
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI +DE LRV + DV+A+GDC+ + LP LA VA RQG Y L
Sbjct: 296 TRQGRISVDEHLRVLRDGVPIPDVYAIGDCA----TNESNPLPTLAAVASRQGVY---LA 348
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
+I G+ PF Y LGSM ++G A+V+L ++ L G +
Sbjct: 349 KKINAELAGKP-------FATPFKYESLGSMVSLGTSSAVVELNGPRK---LDFVGLKAL 398
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRSAYL+ V SWRNR YV VNW + +FGRD++ I
Sbjct: 399 FFWRSAYLSIVGSWRNRLYVIVNWLGSAIFGRDLTLI 435
>gi|301099929|ref|XP_002899055.1| NADH-ubiquinone oxidoreductase, putative [Phytophthora infestans
T30-4]
gi|262104367|gb|EEY62419.1| NADH-ubiquinone oxidoreductase, putative [Phytophthora infestans
T30-4]
Length = 480
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 205/350 (58%), Gaps = 33/350 (9%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K+ I YD LV+A G+ TFG+ GV+E+A FL+E+ HAQ IR ++L N + PG++ E
Sbjct: 148 KYDIHYDALVLACGSRPLTFGLPGVEEHAFFLKEIQHAQRIRNRILENFEAATQPGMTPE 207
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 138
EK RLLH VVVGGGPTG+EF EL D +++D+ +Y ++ VTL+++ EIL+ FD
Sbjct: 208 EKQRLLHFVVVGGGPTGIEFCAELYDLVLQDLVHKYPQTSKHLGVTLVDSGEILNGFDTH 267
Query: 139 LRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR A ++ K + +++V+ +V ++ + + G ++P GL+VW+ GVGP+ L KSL +
Sbjct: 268 LRAVALRKIQKRNTMKIVKKNCIEVTAEGVTVEGGEKIPAGLVVWTAGVGPNELTKSLTV 327
Query: 198 -PKSPGGRIGIDEWLRV--------------PSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
KS G I +++ +V P +VF++GDC+ L+ LPA AQ
Sbjct: 328 FEKSKRGNILTNQYCQVLGAAEVEEKAPWGMPRRSNVFSIGDCAEILDYP----LPATAQ 383
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
A+ Q YL SL K++ P+ ++ G MA +G Y+ L + +
Sbjct: 384 KAQSQANYLTSLFR------------GKNLAPAKPYAFQSKGMMAYLGSYEGLFEA-HPR 430
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ ++L+G+ +W +WRSAYLT++ SWR R V ++W + GRD+S+
Sbjct: 431 DDDTITLSGWKAWFLWRSAYLTKLGSWRLRLQVPLDWLKAILVGRDVSKF 480
>gi|325192333|emb|CCA26778.1| NADHubiquinone oxidoreductase putative [Albugo laibachii Nc14]
Length = 484
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 224/370 (60%), Gaps = 38/370 (10%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+ VHCE L + + YD LVIA GA+ TFG+ GV+ +A FL+E+HHA+ IR
Sbjct: 135 VAVHCE--------LNDRTYNVRYDALVIACGAQPVTFGLPGVERHAFFLKELHHARAIR 186
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
++L N LS GISEEEK RLLH VVVGGGPTGVEF GEL DF+++D+ + Y Y
Sbjct: 187 TRILENFELSTQAGISEEEKRRLLHFVVVGGGPTGVEFCGELHDFLVQDLARLYPLASKY 246
Query: 121 IHVTLIEANEILSSFDDRLRHYATTQL-SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGL 179
+ ++L+++ EIL+ FD LR +A +L S++ +RLV+ ++V +IL GT VP GL
Sbjct: 247 VFISLVDSGEILTGFDQHLREFALRKLASRATLRLVKDNCEEVLEDGVILQSGTRVPCGL 306
Query: 180 LVWSTGVGPSTLVKSLDL-PKSPGGRIGIDEW---LRVPSVQ-----------DVFAVGD 224
+VW+ GVGP+ L KSLD+ KS G I +E+ L VP V+ ++F++GD
Sbjct: 307 VVWTAGVGPNELTKSLDICEKSTRGTILTNEYCQVLGVPQVEKESIFGLDMKSNIFSIGD 366
Query: 225 CSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG 284
C+ E +G + LPA AQ A+ Q YL LL + G KD + DP+ ++ G
Sbjct: 367 CA---EISG-SPLPATAQKAQTQAIYLSQLLRQSLPRG-------KDAHI-DPYHFQSRG 414
Query: 285 SMATIGRYKALVDLRQNKESKGL--SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 342
MA +G Y+ L +L+ G+ +G+ +WL+WRSAYLT++ SWR R V ++W
Sbjct: 415 MMAYLGSYEGLFELKSRNRPDGVLARASGWKAWLIWRSAYLTQLGSWRLRMQVPLDWLKA 474
Query: 343 FVFGRDISRI 352
+ GRD+SR
Sbjct: 475 MIVGRDVSRF 484
>gi|22415742|gb|AAM95239.1| putative NADH dehydrogenase [Trypanosoma brucei]
Length = 491
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 206/337 (61%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLV+A GA+ +TF + G E A FLREV+ A+ IR++L+ N+M +++P S EE
Sbjct: 116 FDVQYDKLVLAHGAQPNTFNVPGAVERACFLREVNEARTIRKRLVQNIMTANLPVTSVEE 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
K RLLH VVVGGGPTGVEFS +L++F+ DV+ + + VT++EA E+ S+FD R+
Sbjct: 176 KKRLLHTVVVGGGPTGVEFSADLAEFLRDDVKNINPELVQFCKVTVLEAGEVFSTFDLRV 235
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R + +L GVR+V+G V V +++I G GL+VWSTGVGPS L K L + +
Sbjct: 236 REWGKRRLDALGVRIVKGNVVAVQEKEVITKSGEVFSTGLVVWSTGVGPSPLTKELKVDR 295
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI +DE L+V + DV+A+GDC+ + LP LA VA RQG Y L
Sbjct: 296 TRQGRISVDEHLQVLRDGVPIPDVYAIGDCA----TNESNPLPTLAAVASRQGVY---LA 348
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
+I G+ +A PF Y LGSM ++G A+V+L ++ L G +
Sbjct: 349 KKINAELAGKPFAA-------PFKYESLGSMVSLGTSSAVVELNGPRK---LDFVGLKAL 398
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRSAYL+ V SWRNR YV VNW + +FGRD++ I
Sbjct: 399 FFWRSAYLSIVGSWRNRLYVIVNWLGSAIFGRDLTLI 435
>gi|261333064|emb|CBH16059.1| NADH dehydrogenase, putative [Trypanosoma brucei gambiense DAL972]
Length = 491
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 206/337 (61%), Gaps = 21/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLV+A GA+ +TF + G E A FLREV+ A+ IR++L+ N+M +++P S EE
Sbjct: 116 FDVQYDKLVLAHGAQPNTFNVPGAVERACFLREVNEARTIRKRLVQNIMTANLPVTSVEE 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
K RLLH VVVGGGPTGVEFS +L++F+ DV+ + + VT++EA E+ S+FD R+
Sbjct: 176 KKRLLHTVVVGGGPTGVEFSADLAEFLRDDVKNINPELVQFCKVTVLEAGEVFSTFDLRV 235
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
R + +L GVR+V+G V V +++I G GL+VWSTGVGPS L K L + +
Sbjct: 236 REWGKRRLDALGVRIVKGNVVAVQEKEVITKSGEVFSTGLVVWSTGVGPSPLTKELKVDR 295
Query: 200 SPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GRI +DE L+V + DV+A+GDC+ + LP LA VA RQG Y L
Sbjct: 296 TRQGRISVDEHLQVLRDGVPIPDVYAIGDCA----TNESNPLPTLAAVASRQGVY---LA 348
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
+I G+ +A PF Y LGSM ++G A+V+L ++ L G +
Sbjct: 349 KKINAELAGKPFAA-------PFKYESLGSMVSLGTSSAVVELNGPRK---LDFVGLKAL 398
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WRSAYL+ V SWRNR YV VNW + +FGRD++ I
Sbjct: 399 FFWRSAYLSIVGSWRNRLYVIVNWLGSAIFGRDLTLI 435
>gi|452821315|gb|EME28347.1| NADH dehydrogenase isoform 1 [Galdieria sulphuraria]
Length = 548
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 206/356 (57%), Gaps = 25/356 (7%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
E KF+I YD LVIA+GA +TFG GV+E+ FL+E+ A+ +RR ++ L+ P I
Sbjct: 199 EKRKFQIFYDYLVIAVGAATNTFGTPGVQEHCYFLKEISDARGLRRAIVERFELASFPDI 258
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 134
S+EEK RLL VVVGGGPTG EF+ EL DF+++D+++ Y + + V L+++ + IL+
Sbjct: 259 SKEEKCRLLSFVVVGGGPTGCEFAAELHDFLVQDLKKYYPKLFGDVQVLLLQSGDSILTQ 318
Query: 135 FDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
FD L+ A +S ++++ + V +V S + L DG E+PYGL VW+ G G L +
Sbjct: 319 FDRTLQEKALENFRQSNIQVITKARVTEVTSTHIRLVDGKEIPYGLAVWAAGNGTQPLTR 378
Query: 194 SL--DLP--KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
L +P K GR+ +D WLRV +VFAVGDC+ + LPA AQVA +QG
Sbjct: 379 LLLSKIPEQKEARGRLLVDSWLRVKGALNVFAVGDCA----AMEPVPLPATAQVAGQQGA 434
Query: 250 YLFSLLNR-------------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 296
YL L NR A + E+ PF + LG +A IGR +A+
Sbjct: 435 YLARLFNRDYCLSCPVPESEEKSTAPLAKWRPGGSPEVAKPFQFLSLGILAYIGRERAMA 494
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ E + +AG L++L+W+S Y+T+ VS+RNR V +W T VFGRD+S+
Sbjct: 495 QIETGLEK--IKMAGVLTYLLWQSVYITKQVSFRNRVLVLFDWFKTRVFGRDMSQF 548
>gi|348674303|gb|EGZ14122.1| hypothetical protein PHYSODRAFT_547440 [Phytophthora sojae]
Length = 481
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 204/350 (58%), Gaps = 33/350 (9%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K+ I YD LV+A G+ TFG+ GV+E+A FL+E+ HAQ+IR ++L N + G++ E
Sbjct: 149 KYDIKYDALVLACGSRPLTFGLPGVEEHAFFLKEISHAQKIRNRILENFEAATQRGVTPE 208
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 138
EK RLLH VVVGGGPTG+EF EL D +++D+ +Y Y+ VTL+++ EIL+ FD
Sbjct: 209 EKQRLLHFVVVGGGPTGIEFCAELYDLVLQDLVHKYPQTSKYLGVTLVDSGEILNGFDKH 268
Query: 139 LRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR A ++ K S + +V+ +V + + + G ++P GL+VW+ GVGP+ L KSL +
Sbjct: 269 LRAVALRKIQKRSTMEIVKKNCIEVTEEGVTVEGGEKIPAGLVVWTAGVGPNELTKSLTV 328
Query: 198 -PKSPGGRIGIDEWLRV--------------PSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
KS G I +++ +V P +VF++GDC+ L+ LPA AQ
Sbjct: 329 FEKSKRGNILTNQYCQVLGAAEVEEKAPWGMPRRSNVFSIGDCAEILDYP----LPATAQ 384
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
A+ Q YL SLL G AK P+ ++ G MA +G Y+ L +
Sbjct: 385 KAQTQANYLTSLLR------GKNPTPAK------PYAFQSKGMMAYLGSYEGLFEAHPRD 432
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ + ++L+G+ +W +WRSAYLT++ SWR R V ++W + GRD+S+
Sbjct: 433 DDR-ITLSGWKAWFLWRSAYLTKLGSWRLRMQVPLDWLKAILVGRDVSKF 481
>gi|452821314|gb|EME28346.1| NADH dehydrogenase isoform 2 [Galdieria sulphuraria]
Length = 550
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 206/359 (57%), Gaps = 29/359 (8%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
E KF+I YD LVIA+GA +TFG GV+E+ FL+E+ A+ +RR ++ L+ P I
Sbjct: 199 EKRKFQIFYDYLVIAVGAATNTFGTPGVQEHCYFLKEISDARGLRRAIVERFELASFPDI 258
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 134
S+EEK RLL VVVGGGPTG EF+ EL DF+++D+++ Y + + V L+++ + IL+
Sbjct: 259 SKEEKCRLLSFVVVGGGPTGCEFAAELHDFLVQDLKKYYPKLFGDVQVLLLQSGDSILTQ 318
Query: 135 FDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
FD L+ A +S ++++ + V +V S + L DG E+PYGL VW+ G G L +
Sbjct: 319 FDRTLQEKALENFRQSNIQVITKARVTEVTSTHIRLVDGKEIPYGLAVWAAGNGTQPLTR 378
Query: 194 SLDLPKSPG-------GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
L L K P GR+ +D WLRV +VFAVGDC+ + LPA AQVA +
Sbjct: 379 LL-LSKIPEQKVDEARGRLLVDSWLRVKGALNVFAVGDCA----AMEPVPLPATAQVAGQ 433
Query: 247 QGKYLFSLLNR-------------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 293
QG YL L NR A + E+ PF + LG +A IGR +
Sbjct: 434 QGAYLARLFNRDYCLSCPVPESEEKSTAPLAKWRPGGSPEVAKPFQFLSLGILAYIGRER 493
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A+ + E + +AG L++L+W+S Y+T+ VS+RNR V +W T VFGRD+S+
Sbjct: 494 AMAQIETGLEK--IKMAGVLTYLLWQSVYITKQVSFRNRVLVLFDWFKTRVFGRDMSQF 550
>gi|166240085|ref|XP_646542.2| hypothetical protein DDB_G0270104 [Dictyostelium discoideum AX4]
gi|182667920|sp|Q55CD9.2|NDH_DICDI RecName: Full=Probable NADH dehydrogenase
gi|165988735|gb|EAL72402.2| hypothetical protein DDB_G0270104 [Dictyostelium discoideum AX4]
Length = 451
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/334 (39%), Positives = 197/334 (58%), Gaps = 22/334 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLVI +G+ +TFGI GV+ENA FL+E+HHA+EIR+K++ + +P +S EE
Sbjct: 135 FEMKYDKLVIGVGSRNNTFGIKGVEENANFLKELHHAREIRQKIIECFERASLPDVSTEE 194
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDD 137
+ RLL V+VGGG TG+EF+ EL+DF D+ + + V + + + L+EA+ +ILS+FD
Sbjct: 195 RERLLSFVIVGGGATGIEFTSELNDFFSEDLSRLFPFVPVNEVKIILLEASGKILSTFDQ 254
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+L A SG+ + VK+V +IL++G +PYGLLVWSTG+G LVK+
Sbjct: 255 KLVKKALINFRNSGIDVRTHSSVKEVLKDYVILDNGDRIPYGLLVWSTGIGQHPLVKNSS 314
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
K RI +D+ LRV + +VF+ GDC+ P AQVA + YL N
Sbjct: 315 FEKDSHDRIIVDDHLRVKNYSNVFSFGDCANVENKN----YPPTAQVASQSAVYLAKEFN 370
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ K N K PF ++ LG +A G+ ++ ++ L+GF+ ++
Sbjct: 371 NLEKLN---PNPPK------PFAFKFLGLLAYTGKKSGIL------QTDFFDLSGFIGFI 415
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
WRSAYLTR+ S R++ V +W T +FGRDIS
Sbjct: 416 TWRSAYLTRLGSLRSKIQVPFDWMRTLIFGRDIS 449
>gi|449546095|gb|EMD37065.1| hypothetical protein CERSUDRAFT_114957 [Ceriporiopsis subvermispora
B]
Length = 471
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 208/348 (59%), Gaps = 23/348 (6%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
+P KFK+SYDKLVIA+GA TF + GVKE+A FL+++ A+ IR ++L ++ P I
Sbjct: 136 QPHKFKLSYDKLVIAVGAYNQTFNVPGVKEHAHFLKDIRDARAIRSRVLECFEQANQPTI 195
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSS 134
+++E+ +LLH +VGGGPTGVEF+ EL D + D+RQ + ++ ++L + A IL S
Sbjct: 196 TDDERRKLLHFCIVGGGPTGVEFAAELHDLLHTDMRQHFPNMARMARISLYDVAPFILGS 255
Query: 135 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
FD L+ YA + + G+ L + V+ V+ K+ + + EVP+GLLVWSTG+ P+ LV+
Sbjct: 256 FDTGLQDYAVKKFKREGISILTQHHVERVEPGKMYVKEQGEVPFGLLVWSTGLAPNPLVQ 315
Query: 194 SLDLPK--SPGGRIGIDEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
S++ + + DE L V P+ +++A+GD + T LPA AQVA
Sbjct: 316 SINEAEKHEKTSSLFTDEHLNVLMKDTGKPN-PEIWAIGDAA----IIKGTPLPATAQVA 370
Query: 245 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 304
++GKYL LN + + S + +PF + + GS+A +G ++AL D R E
Sbjct: 371 NQKGKYLTKKLNTLIR------ESPLSLREAEPFKFHNAGSLAYLGDWEALYD-RTKAEH 423
Query: 305 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
AG L+WL+WRSAY T+ +SW+N+ V W ++FGRD+S+
Sbjct: 424 VKTKDAGRLAWLLWRSAYFTKTLSWKNKILVPTYWFLNWIFGRDLSKF 471
>gi|426193998|gb|EKV43930.1| NDE1 mitochondrial external NADH dehydrogenase [Agaricus bisporus
var. bisporus H97]
Length = 488
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 207/349 (59%), Gaps = 31/349 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F YDKL+IA+GA + TF I GVKE+A FL++V A+ IR ++L ++ P IS+ E
Sbjct: 155 FTARYDKLIIAVGAYSQTFNIPGVKEHAYFLKDVKDARRIRSRILECFEQANQPVISDVE 214
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL+ VVGGGPTGVEF+ EL D + DVR Y + + ++TL + A+ ILSSFD
Sbjct: 215 RRNLLNFCVVGGGPTGVEFAAELHDLLQTDVRTHYPDLARFTNITLYDVADSILSSFDQS 274
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD- 196
L Y S+ GV L V+ V++ KL + + EVP+GLLVWSTG+ P+ LV ++
Sbjct: 275 LVKYTEKMFSREGVHILTNHHVERVEAGKLFIREKGEVPFGLLVWSTGLAPNPLVSAMSG 334
Query: 197 LPKSPGGRIGI-DEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ K+P + I ++ L V P+ DV+A+GD + + E+ LPA AQVA ++
Sbjct: 335 VKKNPKTQSVITNDQLNVIMQETNEPN-PDVWAIGDAATFEEAP----LPATAQVASQKA 389
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD----LRQNKES 304
Y+ + LN + AKD + +PF + + GS+A IG + A+ D L + ++
Sbjct: 390 HYMITKLNTL----------AKDKDHCEPFEFHNQGSLAYIGNWNAIYDRSSTLPEGEKD 439
Query: 305 KGLSL-AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K +S G ++WL+WRSAY T +SWRN+ V W ++FGRD++R
Sbjct: 440 KFMSKETGRVAWLLWRSAYFTMTLSWRNKILVPTYWFLNWMFGRDMTRF 488
>gi|409077999|gb|EKM78363.1| NDE2, mitochondrial external NADH dehydrogenase [Agaricus bisporus
var. burnettii JB137-S8]
Length = 488
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 207/349 (59%), Gaps = 31/349 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F YDKL+IA+GA + TF I GVKE+A FL++V A+ IR ++L ++ P IS+ E
Sbjct: 155 FTARYDKLIIAVGAYSQTFNIPGVKEHAYFLKDVKDARRIRSRILECFEQANQPVISDVE 214
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL+ VVGGGPTGVEF+ EL D + DVR Y + + ++TL + A+ ILSSFD
Sbjct: 215 RRNLLNFCVVGGGPTGVEFAAELHDLLQTDVRTHYPDLARFTNITLYDVADSILSSFDQS 274
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD- 196
L Y S+ GV L V+ V++ KL + + EVP+GLLVWSTG+ P+ LV ++
Sbjct: 275 LVKYTEKMFSREGVHILTNHHVERVEAGKLFIREKGEVPFGLLVWSTGLAPNPLVSAMSG 334
Query: 197 LPKSPGGRIGI-DEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ K+P + I ++ L V P+ DV+A+GD + + E+ LPA AQVA ++
Sbjct: 335 VKKNPKTQSVITNDQLNVIMQETNEPN-PDVWAIGDAATFEEAP----LPATAQVASQKA 389
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD----LRQNKES 304
Y+ + LN + AKD + +PF + + GS+A IG + A+ D L + ++
Sbjct: 390 HYMITKLNTL----------AKDKDHCEPFEFHNQGSLAYIGNWNAIYDRSSTLPEGEKD 439
Query: 305 KGLSL-AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
K +S G ++WL+WRSAY T +SWRN+ V W ++FGRD++R
Sbjct: 440 KFMSKETGRVAWLLWRSAYFTMTLSWRNKILVPTYWFLNWMFGRDMTRF 488
>gi|281204141|gb|EFA78337.1| pyridine nucleotide-disulphide oxidoreductase [Polysphondylium
pallidum PN500]
Length = 558
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 205/353 (58%), Gaps = 28/353 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F++ YD+LV+ +GAE++TFGI GVKENA FL+E+ + IR +++ + PG +
Sbjct: 213 EFELPYDQLVMGVGAESATFGIPGVKENACFLKEISDTRSIRDRMIDCFETAGYPGQPDA 272
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEILSSFD 136
E RLLH V+VGGGPTGVEF EL+DFI DV++ + H+ D VTL+EA IL+ FD
Sbjct: 273 EIDRLLHFVIVGGGPTGVEFCAELNDFITNDVKKAFPKHLTDRCRVTLVEALPHILTVFD 332
Query: 137 DRLRHYATTQLSKSGVRLV--RGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
+ + +L S + + V V +++I+ D + VPYG+LVW+TG P
Sbjct: 333 KNIIDHVEKKLQSSPTTKIWTQTAVTGVKEREMIVRDAEKKERSVPYGMLVWATGNAPRP 392
Query: 191 LVKSLDL---PKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+ + L P+ R G +DE+ RV ++A+GDCS T L AQVA
Sbjct: 393 VTQKLIQSIGPEVQNVRRGLVVDEYFRVKGADGIWAIGDCS-------VTPLAPTAQVAS 445
Query: 246 RQGKYLFSLLNRIG----KAGGGRANSAK---DMELGDPFVYRHLGSMATIGRYKALVDL 298
+QG+YL L N I + G+ N + D++ F YRH+G++A +G A+ +
Sbjct: 446 QQGRYLGRLFNDISEDLHQKKQGQMNDQEFTADLKKKPLFKYRHMGTLAYVGDKSAVFQI 505
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ + ++K + G ++L+WRSAYL++ +S RNR VA +W +FGRD+SR
Sbjct: 506 K-DADNKTTTSEGLATFLLWRSAYLSKCLSIRNRVLVAFDWTKASIFGRDVSR 557
>gi|219117515|ref|XP_002179552.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409443|gb|EEC49375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 654
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 208/406 (51%), Gaps = 62/406 (15%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V CE+V E + + F + YD+LV+A+GA+ +TFGI GVKE +LR+V A+ +R
Sbjct: 255 VTCESVICEGNSCDIQDFSVQYDRLVVAVGAQTNTFGIPGVKEYCNYLRQVEDARRVRTS 314
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
++ +++PG+S+EE+ R L V+G GPTG+EF+ EL DF+ D + Y + Y+
Sbjct: 315 IINCFERANLPGLSDEERIRNLTFAVIGAGPTGIEFAAELRDFVEEDGPKYYPKLLQYVR 374
Query: 123 VTLIEANE-ILSSFDDRLRHYATTQLSKSGV------------------RLVRGIVKDVD 163
+ +IEA+ +L+ FD L+ A QL + + L+ VK+V
Sbjct: 375 IKVIEASPMVLAPFDKELQQEAIAQLKRPTMISDPKVAKLLPPNFQMTELLLEASVKEVK 434
Query: 164 SQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPG-----------GRIGIDEWLR 212
+++LN+G E+PYG+ VW+ G GP L +L L +S G GR+ +D W+R
Sbjct: 435 EDRILLNNGQEIPYGIAVWAAGNGPIPL--TLQLIESLGDEQASAQAVARGRVAVDCWMR 492
Query: 213 VPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI----------GKA 261
Q V + GDCS + LPA AQVA +QG+YL LLN+ G
Sbjct: 493 AIGGQGKVLSFGDCSCMFQQQ----LPATAQVASQQGEYLAKLLNKKFEFTPALTEDGIF 548
Query: 262 GGGRANSAK---------------DMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 306
R + A+ + E PF + +LG +A G AL + +
Sbjct: 549 PPPRKDPARTQTSFSDAIAAFASNNYEYAKPFQFLNLGILAYTGGGSALAQVTPVPDGAS 608
Query: 307 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ G L +WRS YLT+ VSWRNR V +W +FGRDI+R+
Sbjct: 609 VQGKGKLGNALWRSVYLTKQVSWRNRLLVMNDWTKRRLFGRDITRL 654
>gi|406698475|gb|EKD01711.1| NDE1 external NADH dehydrogenase [Trichosporon asahii var. asahii
CBS 8904]
Length = 487
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/341 (38%), Positives = 199/341 (58%), Gaps = 25/341 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ + YDKL+IA G+ + +FG GV ENA FL++V A+ IR +LL L ++ P +SE+E
Sbjct: 158 YHVPYDKLIIATGSRSQSFGTPGVMENANFLKDVREARAIRHRLLQCLEMAYEPSLSEQE 217
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ +L +VGGGPTGVEF+ EL DF+ DVR+R+ + D I + L + A IL SFD
Sbjct: 218 RRDILKFCIVGGGPTGVEFAAELHDFVHEDVRKRFPDIADKIEIRLFDVAPGILMSFDVA 277
Query: 139 LRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR YA + ++ G++++ + VD L L+ G P+GLLVWSTGV + V SL
Sbjct: 278 LREYAEKKYARDGIKIMPNSKISKVDRHALYLDSGERYPFGLLVWSTGVQANEFVNSLQT 337
Query: 198 PKSPGG--RIGIDEWLRV------PSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQG 248
+ I ++E L+V V +V+A+GD C+ +TG+ LPA AQVA +
Sbjct: 338 LQKDDKTHSITVNEHLQVIDKNSGTVVPNVWAIGDNCT---PTTGR--LPATAQVAAQMA 392
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
Y+ LN++ + D+ F +++ GSM IG KA+VD + +G
Sbjct: 393 TYMSKSLNKLAQ-----GTPVTDLAA---FKWKNRGSMVFIGDEKAMVDRSGSSTFRG-R 443
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+AGF++W++WRS Y++ +S RN+ V V WA + FGRDI
Sbjct: 444 VAGFMAWIMWRSYYMSLALSPRNKILVPVYWALAWCFGRDI 484
>gi|406701344|gb|EKD04492.1| NADH dehydrogenase [Trichosporon asahii var. asahii CBS 8904]
Length = 569
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 196/363 (53%), Gaps = 39/363 (10%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K I+YD LV A+G E TFG+ GV + A FL+E+ A++IR KL+ + + PG SE
Sbjct: 215 KVTINYDYLVYAVGCENQTFGMKGVTDYACFLKELPDAEKIREKLMECIETAHFPGQSEA 274
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RL+H +VVGGGPTGVE++GEL DF++ D+++ Y V D + +TLIEA +L +F
Sbjct: 275 EVDRLMHMIVVGGGPTGVEYAGELHDFLIEDLKKWYPEVADKLRITLIEALPNVLPAFSK 334
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLV 192
+L Y + ++ + L R +VKDV +I+ D E+PYGLLVW+TG +
Sbjct: 335 QLIQYTESTFKENKIDVLTRTMVKDVKEDSVIVQDANKETREIPYGLLVWATGNTSRPIT 394
Query: 193 KSL--DLPKSPGGRIGI--DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
++L LP R GI D++L + V+A+GDC+ T AQVA ++G
Sbjct: 395 RNLMAKLPAVQTQRRGIVVDDYLEMLGAPGVYAIGDCTA-------TSYAPTAQVASQEG 447
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELG--------------------DPFVYRHLGSMAT 288
KYL + +IG+ K E G PF Y H GS+A
Sbjct: 448 KYLATTFGKIGQKAKYERQLKKLRESGTASAEEIENVVKKLNRVSKITPFHYSHQGSLAY 507
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL + L+ G + L WRSAY++ + S RNR V +W +FGRD
Sbjct: 508 IGSEKAIADLPLF--NGNLASGGGAAMLFWRSAYISTLYSLRNRSLVMADWLKVKLFGRD 565
Query: 349 ISR 351
+SR
Sbjct: 566 VSR 568
>gi|170091510|ref|XP_001876977.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648470|gb|EDR12713.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 467
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 196/343 (57%), Gaps = 24/343 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + +DKLVIA+GA + TF I GVKE+A FL++V A+ IR ++L ++ P +S+ +
Sbjct: 139 FTLRFDKLVIAVGAYSQTFNIPGVKEHAHFLKDVKDARRIRGRILECFEQANQPTMSDIQ 198
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDR 138
+ LL+ VVGGGPTGVEFS EL D + D+ + Y + +TL + IL FD
Sbjct: 199 RRNLLNFCVVGGGPTGVEFSAELFDLLHSDIAKHYPVLARLAKITLYDVGPSILGMFDKS 258
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L Y S+ G+ L R V+ V+++KLI+ + EVP+GLLVWSTG+ P+ L+ S++
Sbjct: 259 LIQYTEKTFSREGISILTRHHVERVEARKLIVKEQGEVPFGLLVWSTGLAPNPLISSINE 318
Query: 198 PKSPGGRIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
+ G + ++ L V DV+A+GD + ++ LPA AQVA ++GKYL
Sbjct: 319 IQKDGKSLITNDHLNVIMKDGSPNPDVWAIGDAAKIEDAP----LPATAQVANQKGKYLV 374
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL--- 309
L I A+D E PF + + GS+A IG +KA+ D S+G +
Sbjct: 375 KKLRYI----------ARDQEYPKPFEFHNQGSLAYIGDWKAIYDRPGPPGSEGGFMQKE 424
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G +WL+WRSAY T +SWRN+ V W ++FGRD++R
Sbjct: 425 TGRAAWLLWRSAYFTMTLSWRNKILVPTYWFLNWIFGRDLTRF 467
>gi|401886544|gb|EJT50572.1| NDE1, external NADH dehydrogenase [Trichosporon asahii var. asahii
CBS 2479]
Length = 487
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/341 (38%), Positives = 198/341 (58%), Gaps = 25/341 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ + YDKL+IA G+ + +FG GV ENA FL++V A+ IR +LL L ++ P +SE+E
Sbjct: 158 YHVPYDKLIIATGSRSQSFGTPGVMENANFLKDVREARAIRHRLLQCLEMAYEPSLSEQE 217
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ +L +VGGGPTGVEF+ EL DF+ DVR+R+ + D I + L + A IL SFD
Sbjct: 218 RRDILKFCIVGGGPTGVEFAAELHDFVHEDVRKRFPDIADKIEIRLFDVAPGILMSFDVA 277
Query: 139 LRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR YA + ++ G++++ + VD L L+ G P+GLLVWSTGV + V SL
Sbjct: 278 LREYAEKKYARDGIKIMPNSKISKVDRHALYLDSGERYPFGLLVWSTGVQANEFVNSLQT 337
Query: 198 PKSPGG--RIGIDEWLRV------PSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQG 248
+ I ++E L+V V +V+A GD C+ +TG+ LPA AQVA +
Sbjct: 338 LQKDDKTHSITVNEHLQVIDKNSGTVVPNVWATGDNCT---PTTGR--LPATAQVAAQMA 392
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
Y+ LN++ + D+ F +++ GSM IG KA+VD + +G
Sbjct: 393 TYMSKSLNKLAQ-----GTPVTDLAA---FKWKNRGSMVFIGDEKAMVDRSGSSTFRG-R 443
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+AGF++W++WRS Y++ +S RN+ V V WA + FGRDI
Sbjct: 444 VAGFMAWIMWRSYYMSLALSPRNKILVPVYWALAWCFGRDI 484
>gi|392574024|gb|EIW67161.1| hypothetical protein TREMEDRAFT_45240 [Tremella mesenterica DSM
1558]
Length = 472
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 197/342 (57%), Gaps = 20/342 (5%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ + YDKLVIA+G +++FGI GVK++A FL+++ A++IRR+LL L + P S E
Sbjct: 142 YNLPYDKLVIAVGCYSASFGIPGVKKHAHFLKDIRDARKIRRRLLECLEQASEPTCSPEL 201
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL +VGGGPTGVE++ EL DF+ RDV + Y H+KD + +TL + A IL +FD
Sbjct: 202 RRALLSFKIVGGGPTGVEWAAELHDFVHRDVYRLYPHLKDQVRITLYDVAPGILINFDAS 261
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEV-PYGLLVWSTGVGPSTLVKSLDL 197
LR YA + + GV + + + DG E PYGLLVWSTG+ P+ + SL +
Sbjct: 262 LRAYAEKKFHRDGVTIRPNSSITAMGEDWVELDGKERHPYGLLVWSTGLCPNPFIASLPV 321
Query: 198 PKSPGGR-IGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
K R I +D+W RV + ++ VFA+GD + + LPA AQVA +Q K+L
Sbjct: 322 KKHERSRAILVDKWQRVVNTEGQRLKGVFAIGDNATPADGPP---LPATAQVATQQAKWL 378
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL-RQNKESKGLSLA 310
LN G+ + +E F +++ GSM +G +ALVD R++ +A
Sbjct: 379 AKALNAHGR--------GQTLESQPGFEWKNWGSMVYVGNSRALVDRSREDVAGPKSRMA 430
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G+ +W++WRS Y + WRN+ V ++W FGRDI+R
Sbjct: 431 GWAAWILWRSYYAQLAMGWRNKVLVPIHWTLASFFGRDITRF 472
>gi|392560322|gb|EIW53505.1| FAD/NAD-P-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 481
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 200/345 (57%), Gaps = 24/345 (6%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
KF+++YDKLVIA+GA + TF + GVKE+A FL+++ A+ IR ++L ++ P I++
Sbjct: 150 KFQLTYDKLVIAVGAYSQTFNVPGVKEHAYFLKDISDARRIRTRVLDCFEQANQPTITDA 209
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
++ +LL+ +VGGGPTGVEF+ EL DF+ D+ + Y + + L + A IL FD
Sbjct: 210 DRRKLLNFCIVGGGPTGVEFAAELHDFLHTDIARHYPALARMAKINLYDVAPSILGGFDT 269
Query: 138 RLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L+ YAT++ + G+RL+ + V+ V+ ++++ + EV +GLLVWSTG+ P+ L+ S+
Sbjct: 270 GLQEYATSKFKREGIRLLTQHHVQRVEQGRMLVTEEGEVNFGLLVWSTGLAPNPLIDSIT 329
Query: 197 LPKS---------PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
K G + + DVFA+GD + ++ LPA AQVA +Q
Sbjct: 330 EAKKDERTKRTLITDGHLNVVLKDTDAVDPDVFAIGDAATVVDEP----LPATAQVANQQ 385
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
KYL LN + + R S PF +++ GS+A +G ++A+ D +
Sbjct: 386 AKYLTRRLNALVR---DRTPSKA------PFKFQNAGSLAYVGDWEAVFDRTKAARGPKN 436
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L+WL+WRSAY T+ +SWRN+ V + W ++FGRD+SR
Sbjct: 437 KETGRLAWLLWRSAYFTKTLSWRNKILVPMYWFLNWIFGRDLSRF 481
>gi|302683398|ref|XP_003031380.1| hypothetical protein SCHCODRAFT_56625 [Schizophyllum commune H4-8]
gi|300105072|gb|EFI96477.1| hypothetical protein SCHCODRAFT_56625 [Schizophyllum commune H4-8]
Length = 474
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 196/349 (56%), Gaps = 30/349 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I YD+LVI +GA + TF GVKENA FL++V A+ IR ++L ++ P +S+ E
Sbjct: 140 FTIPYDRLVIGVGAYSQTFNTPGVKENALFLKDVRDARAIRARILDCFEQANQPTLSDIE 199
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL+ +VGGGPTGVEF+ EL D I +++ Y + +TL + A IL FD
Sbjct: 200 RRNLLNFCIVGGGPTGVEFAAELHDLIHAEIQSHYPVLARMARITLYDVAPSILGMFDRE 259
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS--- 194
L +Y L + GVR+ G V+ V+ ++I+ + EVP+GLLVWSTG+ P+ LV S
Sbjct: 260 LVNYTENTLRREGVRIRTGHHVERVERDRMIVTEQGEVPFGLLVWSTGLAPNPLVSSITE 319
Query: 195 LDLPKSPGGRIGID---EWLRVPSVQD--VFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
L K G I +D +R D ++ +GD + ++ +LPA AQVA +Q K
Sbjct: 320 LQKDKKSGRTIQVDGHLNAIRADGTPDPNIWVIGDAAQVPDA----ILPATAQVANQQAK 375
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+L LNRI AKD + F + ++GS+A IG +KA+ D +K G
Sbjct: 376 FLTRQLNRI----------AKDKSVDRVFEFHNMGSLAYIGNWKAIYDRGSSKNGNGDKP 425
Query: 310 AGF------LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A F ++WL+WRSAY TR +S RN+ V W ++FGRD++R
Sbjct: 426 APFTKETGRVAWLLWRSAYFTRTLSVRNKILVPFYWFLNWIFGRDLTRF 474
>gi|167517391|ref|XP_001743036.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778135|gb|EDQ91750.1| predicted protein [Monosiga brevicollis MX1]
Length = 405
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 183/334 (54%), Gaps = 33/334 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATF-LREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
I Y+ LV+A+GA+ T + GV E+ F L+E HA+ IR + L + +S E +
Sbjct: 102 IDYNHLVVAIGAQPHTLNVPGVDESRVFFLKETEHARNIRSHIHDCLEAASNTTLSPEVR 161
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL VVGGGPTGVEF+ ELSDF+ +D + Y + V + EA IL SFD L
Sbjct: 162 RRLTTFCVVGGGPTGVEFAAELSDFLEQDAARLYPELTMLPQVIIFEAGTSILGSFDQAL 221
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
Y ++ + V + ++ VK+V Q L+L+ G EV +VWSTGV P +LV+ LD
Sbjct: 222 SEYGLMRMKRQHVDIRLQTQVKEVKDQSLVLSTGEEVNTSTIVWSTGVAPRSLVQQLDAK 281
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
G IG+DE L++ Q+ +A+GDC+ LE LP +AQVAE+QG YL N+
Sbjct: 282 HKSNGSIGVDECLQIQEAQNAYALGDCAS-LERR----LPTVAQVAEQQGAYLARHFNQ- 335
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+SAK PF + G +A +G Y G+ L+GF +WLVW
Sbjct: 336 ------NFSSAK------PFAFASKGMLAYLGSY------------GGVKLSGFKAWLVW 371
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
R YLT++ +WR+R V +WA T FGRD +R
Sbjct: 372 RGGYLTKLGTWRSRLQVPFDWAKTMFFGRDPARF 405
>gi|395329446|gb|EJF61833.1| FAD/NAD(P)-binding domain-containing protein [Dichomitus squalens
LYAD-421 SS1]
Length = 491
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 203/345 (58%), Gaps = 19/345 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+++YDKLVIA+GA + TF + GVKE+A FL+++ A+ IR ++L ++ P I++
Sbjct: 155 RFELTYDKLVIAVGAYSQTFNVPGVKEHAHFLKDILDARRIRARILECFEQANQPTITDA 214
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
++ +LL+ VVGGGPTGVEF+ EL D + D+ + Y + + L + A IL FD+
Sbjct: 215 DRRKLLNFCVVGGGPTGVEFAAELHDLLHTDMSRHYPQLARMARINLYDVAPTILGGFDE 274
Query: 138 RLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L+ YA ++ + G+RL+ + V+ V+ ++ + + EV +GLLVWSTG+ P+ L++S+
Sbjct: 275 GLQKYAESKFRREGIRLLTQHHVERVEEGRMFVTEEGEVHFGLLVWSTGLAPNPLIQSIT 334
Query: 197 LPKS---PGGRIGIDEWLRV------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
K + DE L V DVFA+GD + + + LPA AQVA +Q
Sbjct: 335 EAKKDERTKRSLITDEHLNVVMKDTNAPDPDVFAIGDAATIGD---EPPLPATAQVANQQ 391
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
KY+ LN++ K+ G + + PF +++ GS+A +G ++A+ D +
Sbjct: 392 AKYITKRLNKLIKSSTGVLGADE-----KPFKFQNAGSLAYVGDWEAIFDRTRAASGPKN 446
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G ++WL+WRSAY T+ +S RN+ V V W ++FGRD+SR
Sbjct: 447 KETGRVAWLLWRSAYFTKTLSVRNKILVPVYWFLNWIFGRDLSRF 491
>gi|392590356|gb|EIW79685.1| FAD/NAD(P)-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 477
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 194/342 (56%), Gaps = 23/342 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLVIA+GA + TF + GVKE+A FL++V A+ IR ++L ++ P +S+ +
Sbjct: 150 FRLRYDKLVIAVGAYSQTFNVPGVKEHAHFLKDVKDARAIRTRILECFEQANQPTVSDIQ 209
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL+ VVGGGPTGVEF+ EL D + ++ + Y + +T+ + A IL SFD
Sbjct: 210 RRNLLNFCVVGGGPTGVEFAAELHDLLHEEMERYYPSLARLAKITVYDVAPSILGSFDKS 269
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA + + G+ + R V+ V+ K+ + + EVP+GLLVWSTG+ P+ LV+S+
Sbjct: 270 LGSYAERKFRRDGIAIKTRHHVERVEKAKMFVKEQGEVPFGLLVWSTGLAPNPLVQSISA 329
Query: 198 PK--SPGGRIGIDEWLRVPSVQ-----DVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ + D L V + DV+A+GD + ++ VLPA AQVA ++ KY
Sbjct: 330 MQKHEKTQSLLTDNQLNVLTADGQPDPDVWAIGDAAIIKDA----VLPATAQVANQKAKY 385
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ LN+I KD E PF + + GS+A +G +KA+ D +
Sbjct: 386 MVKKLNKI----------VKDKEHEAPFEFHNQGSLAYLGDWKAIYDASNAESGIRGKET 435
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L+WL+WRSAY T +S RN+ V W ++FGRDISR
Sbjct: 436 GHLAWLLWRSAYFTMTLSVRNKILVPTYWFLNWIFGRDISRF 477
>gi|384248975|gb|EIE22458.1| FAD/NAD(P)-binding domain-containing protein [Coccomyxa
subellipsoidea C-169]
Length = 624
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 204/371 (54%), Gaps = 45/371 (12%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+++YD +VIA+G + +TFG+ GV E+ FL+E+ A +RR++ L+ +PG EE
Sbjct: 258 QFEVAYDAVVIAIGEQTATFGVPGVMEHCYFLKEISDAVGLRRRIGQCFELAALPGTPEE 317
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
++ R L +VVGGGPTGVEF+G L DF+ D+ ++Y + + V L++ A IL+ F
Sbjct: 318 DRKRALRFIVVGGGPTGVEFAGTLRDFVRGDLARKYPELMGDVEVVLLQSAQSILTQFSA 377
Query: 138 RLRHYATTQLSKSGVRL---VRGIVKDVDSQKL------------ILNDGTEVPYGLLVW 182
L+ A K+GV + VR + D +L +L G + YG+ VW
Sbjct: 378 GLQQRALDTFRKTGVSVRTGVRVVAITQDQARLYYRPFSQHLQGVVLEGGERLDYGVCVW 437
Query: 183 STGVGPSTLVKSL--DLP--------KSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLES 231
STG LV+++ +P ++P ++ +D +LR+ V+D A+GDCS
Sbjct: 438 STGNAARPLVQAVAGAVPVQREALAGRNPAAAKLTVDPFLRIAGVRDAIALGDCS----R 493
Query: 232 TGKTVLPALAQVAERQGKYLFSLLN---RIGKAGGGRANSAKDME---------LGDPFV 279
LPA AQVA +QG Y+ ++N R+G G +A A+ E PF
Sbjct: 494 LSGAPLPATAQVAGQQGAYVARMINKGYRLGTGGLDKAFPARWKEGSASEEVEYFEKPFA 553
Query: 280 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ LG MA +G +A+ L K S SLAG+LS+L+WRS Y+T+ VS RNR + +W
Sbjct: 554 FLSLGLMAYVGSDQAITQLEAGKAS--FSLAGYLSFLLWRSVYITKQVSTRNRILILFDW 611
Query: 340 ATTFVFGRDIS 350
T VFGRD+S
Sbjct: 612 VKTRVFGRDLS 622
>gi|336372905|gb|EGO01244.1| NDE1, mitochondrial external NADH dehydrogenase [Serpula lacrymans
var. lacrymans S7.3]
Length = 478
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 195/342 (57%), Gaps = 23/342 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLVI++GA + TF + GVKE A FL++V A+ IR +++ ++ P IS+ E
Sbjct: 151 FTLRYDKLVISVGAYSQTFNVPGVKEYAHFLKDVRDARSIRTRIIECFEQANQPIISDVE 210
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ RLL+ +VGGGPTGVEF+ EL D + ++ + Y + +TL + A IL +FD
Sbjct: 211 RRRLLNFCIVGGGPTGVEFAAELHDLLHAEIEKHYPSLARMAKITLYDVAPNILGNFDKS 270
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-D 196
L YA + + G+ + R V+ V+ K+ + + EVP+GLLVWSTG+ P+ L++S+ +
Sbjct: 271 LGVYAVDKFQRDGISIKTRHHVERVEKDKMFVKEQGEVPFGLLVWSTGLAPNPLIQSIKE 330
Query: 197 LPKSPGGR-IGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ K + + DE L V +V+A+GD S + LPA AQVA ++ KY
Sbjct: 331 VSKDEKTQSLLTDEQLNVIKQDGTPDPNVWAIGDASVIPNAR----LPATAQVANQKAKY 386
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
L LN+I KD E PF + LGSMA +G +KA+ D +
Sbjct: 387 LVKKLNKI----------VKDQEHTKPFEFLDLGSMAYLGDWKAIYDRSGADTGIKTKES 436
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L+WL+WRSAY T +S RN+ V + W ++FGRD++R
Sbjct: 437 GRLAWLLWRSAYFTMTLSLRNKILVPMYWFMNWIFGRDLTRF 478
>gi|389746284|gb|EIM87464.1| FAD/NAD-P-binding domain-containing protein [Stereum hirsutum
FP-91666 SS1]
Length = 475
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 196/344 (56%), Gaps = 25/344 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I YD+LVIA+G + TFGI GVKE+A FL++V A+ IR ++L ++ P +++ +
Sbjct: 146 FDIKYDRLVIAVGCYSQTFGIPGVKEHAHFLKDVKDARMIRTRILECFEQANQPILTDVQ 205
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LLH +VGGGPTGVEF+ EL D + D+ + Y ++ + ++L + A IL SFD
Sbjct: 206 RRNLLHFAIVGGGPTGVEFAAELHDLLHTDIAKHYPNLARFAKISLYDVAPNILGSFDSG 265
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-- 195
L YA + + G+ L+ V+ V+S ++ + + EVP+GLLVWSTG+ P+ L++++
Sbjct: 266 LAEYAEKKFKRDGITLMTSHHVERVESGRMFIKEKGEVPFGLLVWSTGLAPNPLIETISP 325
Query: 196 -DLPKSPG-GRIGIDEWLRVPSVQ-----DVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ K P G + D+ L + DV+ +GD + +E LPA AQVA ++
Sbjct: 326 EEYKKHPKTGSLFTDDNLNILRADGTPDPDVWGIGD-AAMIEGVA---LPATAQVANQKA 381
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
YL LN I KD E PF + + G++A +G +KA+ D +
Sbjct: 382 MYLHKKLNTI----------VKDKEHITPFEFHNKGTLAYLGDWKAIYDRSHAESGPQTK 431
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G ++WL+WRSAY T VS RN+ + + W ++FGRD++R
Sbjct: 432 ETGRIAWLLWRSAYFTMTVSLRNKILIPIYWFLNWIFGRDLTRF 475
>gi|409047219|gb|EKM56698.1| hypothetical protein PHACADRAFT_91741 [Phanerochaete carnosa
HHB-10118-sp]
Length = 465
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 195/346 (56%), Gaps = 30/346 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGIS 76
F++ YD LVIA+GA + TFGI GVKE+A FL+++ A+ IR ++L ++ P +S
Sbjct: 137 FELHYDALVIAVGAYSQTFGIPGVKEHAHFLKDISDARAIRNRVLECKTGFEQANQPTLS 196
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSF 135
+ E+ LH +VGGGPTGVEF+ EL D + D+++ Y + +TL + A IL SF
Sbjct: 197 DIERRNQLHFCIVGGGPTGVEFAAELHDLLNTDIKKHYPTLHRLARITLFDVAPNILGSF 256
Query: 136 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
D+ L+ +A + + G+R L + V+ V+ KL + + EVP+GLLVWSTG+ P+ L+KS
Sbjct: 257 DEGLQDFAVQRFKREGIRILTQHHVEKVEEGKLFVKEKGEVPFGLLVWSTGLAPNPLIKS 316
Query: 195 LDLPK--SPGGRIGIDEWLRV---PSVQ---DVFAVGDCSGYLESTGKTVLPALAQVAER 246
+ K + DE +V P Q +FA+GDC+ T LPA AQ
Sbjct: 317 ISEAKKHEKTHSLITDEHCQVLMGPDAQPDPSIFAIGDCA----MIDGTPLPATAQGTP- 371
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 306
KYL LN++ + +E PFV+ +GS+A +G + A+ D R +
Sbjct: 372 -PKYLTKKLNKL----------VRGVEHTKPFVFNDMGSLAYLGDWHAVYD-RTKADRVK 419
Query: 307 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
AG +WL+WRSAY TR +S RN+ V W ++FGRD+SR
Sbjct: 420 TKEAGRFAWLLWRSAYFTRTLSIRNKILVPFYWFMNWLFGRDLSRF 465
>gi|296419737|ref|XP_002839448.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635609|emb|CAZ83639.1| unnamed protein product [Tuber melanosporum]
Length = 485
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 199/352 (56%), Gaps = 29/352 (8%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F++ +DK V+A+GA + TFG+ GVK++A FL++V A+ IRR++L + +P SE
Sbjct: 145 QFEVGWDKAVVAVGAFSQTFGVEGVKDHAFFLKDVADARAIRRRILECFEEAALPTASEA 204
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
K +LLH VVGGGPTG+EFS EL D + D+ + Y + Y +T+ + A ILS FD
Sbjct: 205 RKKQLLHFAVVGGGPTGIEFSAELHDLLSDDLTKLYPSLAKYHRITVYDVAPRILSMFDT 264
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST-LVKSL 195
L YA S+ + + V V+S+ + + EV G +VWSTG+ P+ L K+L
Sbjct: 265 SLAKYAEKVFSRQKISIKTSHHVHKVNSEAVHTREDGEVLVGCVVWSTGLAPNPFLAKAL 324
Query: 196 D---LPKSPGGRIGIDEWLRVPSV----------QDVFAVGDCSGYLESTGKTVLPALAQ 242
G +I +D+ LR S+ DVFA+GDC+ S G LPA AQ
Sbjct: 325 KGKLQMDERGSKIVVDDHLRASSMDERGSTSWPLDDVFAIGDCA----SLGGQELPATAQ 380
Query: 243 VAERQGKYLFSLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
VA +Q +L LN+ + KA G+ K ++ F +R LG MA +G ++A+
Sbjct: 381 VANQQAIWLGKTLNKAAVRKAAEGKPGPVK-VQDEKKFRFRSLGIMAYLGGWRAIT---- 435
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+S L G ++W++WR+AYLT+ VSWRNR + W T +V GRDI+R
Sbjct: 436 --QSGSAELKGRMAWVLWRTAYLTKSVSWRNRILIPTLWFTNWVMGRDINRF 485
>gi|255726764|ref|XP_002548308.1| hypothetical protein CTRG_02605 [Candida tropicalis MYA-3404]
gi|240134232|gb|EER33787.1| hypothetical protein CTRG_02605 [Candida tropicalis MYA-3404]
Length = 569
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 213/377 (56%), Gaps = 38/377 (10%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
++ E +E ++YD LV+ +GA+ STFGI GV EN+TFL+EV A IR+KL+
Sbjct: 200 AKSTVSEYTGVEEITTTLNYDYLVVGVGAQPSTFGIPGVAENSTFLKEVSDATAIRKKLM 259
Query: 65 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 124
+ +++ + E+ RLL VV GGGPTGVE +GE+ D+I +D+++ V D + VT
Sbjct: 260 DVIEAANILPKGDPERKRLLSVVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELTVT 319
Query: 125 LIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----E 174
L+EA +L++F+ +L Y + + L+ ++K VD +++I N DG+ +
Sbjct: 320 LVEALPNVLNTFNKKLIEYTKEVFKSTNINLMTNTMIKKVDGKEVIANHKNADGSTETIQ 379
Query: 175 VPYGLLVWSTGVGPST----LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 230
+PYGLL+W+TG P L+ +D K+ + +D+ L+V +++A+GDC+
Sbjct: 380 IPYGLLIWATGNAPRNFTHDLISKVDAQKNARRGLLVDQHLKVDGTDNIYALGDCTF--- 436
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGG-----GRANSAKD----------MELG 275
T P AQVA ++G+YL + +++ + GRA + +E
Sbjct: 437 ----TKYPPTAQVAFQEGEYLANYFDKLHQVESLKYTIGRATEQDNVPTLSKKLARLEKN 492
Query: 276 DP-FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
P F+Y + GS+A IG KA+ DL S +S G L++L WRSAY+ +S +N+
Sbjct: 493 LPHFIYNYQGSLAYIGSEKAVADLVWGDWS-NISAGGSLTFLFWRSAYIYMCLSVKNQVL 551
Query: 335 VAVNWATTFVFGRDISR 351
V ++WA ++FGRD+S+
Sbjct: 552 VVLDWAKVYLFGRDVSK 568
>gi|380477899|emb|CCF43900.1| hypothetical protein CH063_13469 [Colletotrichum higginsianum]
Length = 532
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 205/376 (54%), Gaps = 64/376 (17%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YDKLVI++GA + TFGI GVKE A+FLR+V A+ IR ++L +D P ++E++
Sbjct: 176 VPYDKLVISVGAYSQTFGIEGVKEYASFLRDVGDARSIRLRVLQCFEKADWPTTTDEQRK 235
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLR 140
+LLH VVGGGPTG+EF+ EL D I D+ + Y H+ +YI +T+ + A ++L FD +L
Sbjct: 236 KLLHFAVVGGGPTGIEFAAELHDLIHDDLSKLYPHLMEYIDITIYDIAPKVLPMFDQQLA 295
Query: 141 HYATTQLSKSGVRL-----VRGIVKDVDSQ----KLILND--GTEVPYGLLVWSTGVGPS 189
YA + G+++ ++ I D D KL + + EV G++VWSTG+ +
Sbjct: 296 SYAEDLFRRQGIKVKTEHHLQRIRPDEDDALGTLKLKIKEYGDDEVGAGIVVWSTGLMQN 355
Query: 190 TLV-----KSLDLPKSPGGRIG-------------------IDEWLRV----PS-----V 216
LV K L P + R G D LRV P+ +
Sbjct: 356 PLVQTIMKKELRNPNAAAERKGKEETGTVKILKAEKSAGIVTDSCLRVRLDDPADAKAVL 415
Query: 217 QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD 276
DV+++GDCS LE+ LPA AQVA +Q YL LN+ AG G++
Sbjct: 416 PDVYSMGDCS-VLET---ETLPATAQVASQQAVYLAKALNKAAGAGAGQSK--------- 462
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF +R+LG+MA +G +KA+ +S L G +W++WR AYLT+ +S RN+ V
Sbjct: 463 PFKFRNLGTMAYLGSWKAI------HQSSADELKGRAAWILWRCAYLTKSMSIRNKILVP 516
Query: 337 VNWATTFVFGRDISRI 352
V W T+VFGR ISR
Sbjct: 517 VYWFITWVFGRGISRF 532
>gi|393214664|gb|EJD00157.1| FAD/NAD-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 500
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 201/344 (58%), Gaps = 24/344 (6%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F I YDKLVIA+G A TFG+ GVKE FL++V A+ IR ++L + P +S+
Sbjct: 171 EFTILYDKLVIAVGCYAQTFGVPGVKEYGYFLKDVRDARAIRSRVLECFEEASQPTLSDI 230
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIE-ANEILSSFD 136
++ LL+ +VG GPTGVEF+ EL D + D+R+ Y + + L + A+ +L F+
Sbjct: 231 DRRNLLNFCIVGAGPTGVEFAAELHDLLKSDIRKYYGEKLTRLARINLYDVADRMLGGFE 290
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L YA + ++ G+ + +R V+ V+ L + + EVP+G+LVWSTG+ P+ L++S+
Sbjct: 291 EGLAKYAERKFARDGINIRLRHHVERVEDGVLHVKEQGEVPFGMLVWSTGLAPNPLIQSI 350
Query: 196 DLPKSPG--GRIGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ G G + D LRV ++++A+GDC+ + +LPA AQVA ++
Sbjct: 351 AEIEKDGKTGSLLTDNHLRVIKKDGSISENIWAIGDCAIIQDE----LLPATAQVASQKA 406
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
KY+ +LNR+ +D +PF +R+ GS+A +G +KAL D + + S
Sbjct: 407 KYVTRVLNRL----------VRDRPTEEPFQFRNRGSLAYLGDWKALYDRSKVETGPKGS 456
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L+WL+WRSAY T+ +S RN+ V W ++FGRDI+R+
Sbjct: 457 ETGRLAWLLWRSAYFTQTLSIRNKITVPYYWFLNWIFGRDITRL 500
>gi|71009789|ref|XP_758311.1| hypothetical protein UM02164.1 [Ustilago maydis 521]
gi|46098053|gb|EAK83286.1| hypothetical protein UM02164.1 [Ustilago maydis 521]
Length = 593
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 201/366 (54%), Gaps = 44/366 (12%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K I YD LV ++G E TFGI GVK++A FL+E+ A++IR +L+ + + + G SEE
Sbjct: 238 KVTIPYDYLVYSVGTENQTFGIEGVKKHACFLKELSDAEKIRARLIDCVESAAIKGQSEE 297
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLLH VVVGGGPTG+E++ EL DF+ D+ + Y V + + VTL+EA IL F
Sbjct: 298 EIDRLLHMVVVGGGPTGIEYAAELRDFVESDLIRWYPEVANKLRVTLVEALPNILPMFSQ 357
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPSTLV 192
L Y + ++ + L + +VKDVD + +++ + ++PYGLLVW+ G L
Sbjct: 358 TLIKYTESTFKENSIDILTKHMVKDVDDRDVLVKTPSGEEKKIPYGLLVWAAGNTARPLT 417
Query: 193 KSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+ L LP+S R G +D+ +R+ +D +FA+GD + T AQ A +Q
Sbjct: 418 RQLMAALPESQKNRRGLDVDDHMRLKGAEDSIFALGDATA-------TQFAPTAQAASQQ 470
Query: 248 GKYLFSLLNRIG-------KAGGGRANSAKDMELGD------------PFVYRHLGSMAT 288
G YL + N++ K + +A EL PF Y H GS+A
Sbjct: 471 GAYLARVFNQLARLHILEDKLEAAKKANADASELSGLERQIEKAAKIRPFKYSHQGSLAY 530
Query: 289 IGRYKALVD---LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG +A+ D L N+ + G G ++++ WRSAY++ + S RNR VA +W F+F
Sbjct: 531 IGSERAIADIPLLGNNQIASG----GVVTFMFWRSAYMSMLFSLRNRSLVAADWFKVFLF 586
Query: 346 GRDISR 351
GRD+SR
Sbjct: 587 GRDVSR 592
>gi|19112053|ref|NP_595261.1| mitochondrial NADH dehydrogenase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74675998|sp|O43090.1|NDH2_SCHPO RecName: Full=Probable NADH-ubiquinone oxidoreductase C947.15c,
mitochondrial; Flags: Precursor
gi|2894302|emb|CAA17043.1| mitochondrial NADH dehydrogenase (predicted) [Schizosaccharomyces
pombe]
Length = 551
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 198/365 (54%), Gaps = 49/365 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISEE 78
I YD LV A+GA TFGI GV+++ FL+E A+++ ++ +L V +S E
Sbjct: 192 IPYDTLVFAIGAGNQTFGIQGVRDHGCFLKEAGDAKKVFNRIFE--ILEQVRFNKDLSPE 249
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDD 137
E++RLLH VVGGGPTG+EF+ E+ DFI DV+ + ++ IHVTLIEA +L F
Sbjct: 250 ERARLLHITVVGGGPTGMEFAAEMQDFIDNDVKDMFPELQKDIHVTLIEAAPGVLPMFTK 309
Query: 138 RLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGP 188
L Y ++++ + +VKDV+ + LI+ DG+ E+PYG+LVW+ G+
Sbjct: 310 SLITYTENLFKNLNIKIMTKTVVKDVNEKNLIVQKTNPDGSKAMQEIPYGMLVWAAGITA 369
Query: 189 STLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
L ++L +P+ G R G +DE+ RV V +++AVGDC+ + LPA AQVA
Sbjct: 370 RPLTRTLMSSIPEQSGARKGLIVDEFFRVKGVPEMYAVGDCAF-------SGLPATAQVA 422
Query: 245 ERQGKYLFSLLNRIGKAG----------------------GGRANSAKDMELGDPFVYRH 282
+QG +L LN GK G + ++L +PF Y H
Sbjct: 423 NQQGAWLAKNLNVEGKKFALHERIQALEKQLGEKEAPSQVAGLKQQVEQLKL-EPFKYHH 481
Query: 283 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 342
G++A +G KA+ DL+ K L L G + WR AYL ++S R++F V ++W T
Sbjct: 482 QGALAYVGDEKAIADLKLPFMKKMLPLQGIVGHTFWRLAYLNELISARSQFMVLIDWLKT 541
Query: 343 FVFGR 347
+FGR
Sbjct: 542 RLFGR 546
>gi|388854124|emb|CCF52274.1| probable NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Ustilago hordei]
Length = 595
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 203/366 (55%), Gaps = 44/366 (12%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K I YD LV ++G E TFGI GV+++A FL+E++ A++IR +L+ + + + G S+E
Sbjct: 240 KVTIPYDYLVYSVGTENQTFGIQGVQKHACFLKELNDAEKIRARLIDCVESAAIKGQSDE 299
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLLH VVVGGGPTG+E++ EL DF+ D+ + Y V + + VTLIEA IL F
Sbjct: 300 EIDRLLHMVVVGGGPTGIEYAAELRDFVESDLIRWYPEVANKLRVTLIEALPNILPMFSQ 359
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLV 192
L Y + ++ + L + +VKDVD + +++ + ++PYGLLVW+ G L
Sbjct: 360 TLIKYTESTFKENSIDILTKHMVKDVDDRDVLVKTPSGQEKKIPYGLLVWAAGNTARPLT 419
Query: 193 KSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+ L LP++ R G +D+ +R+ +D +FA+GD + T AQ A +Q
Sbjct: 420 RQLMSALPEAQKNRRGLEVDDHMRLKGAEDSIFALGDATA-------TQFAPTAQAASQQ 472
Query: 248 GKYLFSLLNRIGKAG-------GGRANSAKDMELGD------------PFVYRHLGSMAT 288
G YL + N++ + + N+A EL PF Y H GS+A
Sbjct: 473 GAYLARVFNQLARLHLLEHRLEAAKKNNADASELNGLERQIEKAAKVRPFKYTHQGSLAY 532
Query: 289 IGRYKALVD---LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG KA+ D L N+ + G G ++++ WRSAY++ + S RNR VA +W F+F
Sbjct: 533 IGSEKAIADIPLLGNNQIASG----GVVTFMFWRSAYVSMLFSLRNRSLVAADWFKVFLF 588
Query: 346 GRDISR 351
GRD+SR
Sbjct: 589 GRDVSR 594
>gi|402219597|gb|EJT99670.1| NADH dehydrogenase [Dacryopinax sp. DJM-731 SS1]
Length = 544
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 198/361 (54%), Gaps = 41/361 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L+ A+GAE TFGI G++E+A FL+E+ A+++R +L+ + + G + E
Sbjct: 193 IPYDYLIYAVGAENQTFGIKGIREHACFLKELPDAEKLRTRLMDCVETAAFKGQAPSEID 252
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RL+H +VVGGGPTGVEF+GEL DF++ D+ Y + +++H++LIEA +L F +L
Sbjct: 253 RLMHIIVVGGGPTGVEFAGELHDFLVDDLHSWYPELANHLHISLIEALPNVLPVFSKQLI 312
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT-----EVPYGLLVWSTGVGPSTLVKS 194
Y + + + L R +VK+V +K +L G E+PYGLLVW+ G + +
Sbjct: 313 QYTESTFKANKIDILTRTMVKEV-REKTVLVQGENKELREIPYGLLVWAAGNTSRQITRD 371
Query: 195 L--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
L LP R G +D+ LR+ VFA+GDC+ T+ AQVA +QGKY
Sbjct: 372 LMAQLPNVQNQRRGLLVDDHLRLLGADGVFALGDCTA-------TLYAPTAQVASQQGKY 424
Query: 251 LFSLLNRIGKAGGGRAN--------SAKDMELG------------DPFVYRHLGSMATIG 290
+ +L ++ K A AK E+ PF Y H GS+A IG
Sbjct: 425 IGRVLEQMAKKEQLEATLRSLRVSPDAKPEEIEAVVKQINKVANIKPFHYSHQGSLAYIG 484
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA+ DL + L+ G ++L WRSAY++ ++S RNRF V +W +FGRD+S
Sbjct: 485 SEKAVADLPLF--NGNLATGGVATFLFWRSAYISNLLSLRNRFLVLNDWMKVKLFGRDVS 542
Query: 351 R 351
R
Sbjct: 543 R 543
>gi|392576735|gb|EIW69865.1| hypothetical protein TREMEDRAFT_43521 [Tremella mesenterica DSM
1558]
Length = 575
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 194/363 (53%), Gaps = 45/363 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+G E TFGI GV E+A FL+E+ A +IR KLL + + E E
Sbjct: 224 IPYDYLVYAVGCENQTFGIKGVTEHACFLKELSDADKIRTKLLDCIETAAFKDQPEAEVD 283
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RL+H +VVGGGPTGVE++GEL DF++ D+++ Y V D + +TLIEA +L +F +L
Sbjct: 284 RLMHMIVVGGGPTGVEYAGELHDFLIDDLKKWYPEVADRLRITLIEALPNVLPAFSKQLI 343
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L R +VKDV + +I+ D EVPYGLLVW+TG + ++L
Sbjct: 344 QYTESTFKENKIDVLTRTMVKDVTDKSVIVQDANKETREVPYGLLVWATGNTSRQITRNL 403
Query: 196 --DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
LP + R G +D++L + Q ++A+GDC+ T AQVA ++G YL
Sbjct: 404 MTKLPAAQTQRRGLLVDDYLCMLGTQGIYALGDCTA-------TQYAPTAQVASQEGIYL 456
Query: 252 FSLLNRIGKAGG-----------------------GRANSAKDMELGDPFVYRHLGSMAT 288
+ ++IG+ + N A PF Y H GS+A
Sbjct: 457 AQMFSKIGQKNKLERQLAELRASPNAVAEEVEAVVKKLNRASKQT---PFHYSHQGSLAY 513
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL + + G + L WRSAY++ + S RNR V +WA +FGRD
Sbjct: 514 IGSEKAIADL--PFFNGNFASGGGAAMLFWRSAYISTLYSVRNRTLVMADWAKVKLFGRD 571
Query: 349 ISR 351
+SR
Sbjct: 572 VSR 574
>gi|336385745|gb|EGO26892.1| hypothetical protein SERLADRAFT_464474 [Serpula lacrymans var.
lacrymans S7.9]
Length = 478
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 195/342 (57%), Gaps = 23/342 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLVI++GA + TF + GVKE A FL++V A+ IR +++ ++ P IS+ E
Sbjct: 151 FTLRYDKLVISVGAYSQTFNVPGVKEYAHFLKDVRDARSIRTRIIECFEQANQPIISDVE 210
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ RLL+ +VGGGPTGVEF+ EL D + ++ + Y + +TL + A IL +FD
Sbjct: 211 RRRLLNFCIVGGGPTGVEFAAELHDLLHAEIEKHYPSLARMAKITLYDVAPNILGNFDKS 270
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-D 196
L YA + + G+ + R V+ V+ K+ + + EVP+GLLVWSTG+ P+ L++S+ +
Sbjct: 271 LGVYAVDKFQRDGISIKTRHHVERVEKDKMFVKEQGEVPFGLLVWSTGLAPNPLIQSIKE 330
Query: 197 LPKSPGGR-IGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ K + + DE L V +V+A+GD S + LPA AQVA ++ KY
Sbjct: 331 VSKDEKTQSLLTDEQLNVIKQDGTPDPNVWAIGDASVIPNAR----LPATAQVANQKAKY 386
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
L LN+I KD E PF + LGSMA +G +KA+ D +
Sbjct: 387 LVKKLNKI----------VKDQEHTKPFEFLDLGSMAYLGDWKAIYDRSGADTGIKTKES 436
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L+WL+WRSAY T +S RN+ V ++ ++FGRD++R
Sbjct: 437 GRLAWLLWRSAYFTMTLSLRNKILVPMHRFMNWIFGRDLTRF 478
>gi|343429144|emb|CBQ72718.1| probable NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Sporisorium reilianum SRZ2]
Length = 592
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 201/366 (54%), Gaps = 44/366 (12%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K I+YD LV ++G E TFGI GVK++A FL+E++ A++IR +L+ + + + G SEE
Sbjct: 237 KVTIAYDYLVYSVGTENQTFGIEGVKKHACFLKELNDAEKIRARLIDCVESAAIKGQSEE 296
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLLH VVVGGGPTG+E++ EL DF+ D+ + Y V + + VTLIEA IL F
Sbjct: 297 EIDRLLHMVVVGGGPTGIEYAAELRDFVESDLIRWYPEVANKLRVTLIEALPSILPMFSQ 356
Query: 138 RLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPSTLV 192
L Y + ++ + L+ + +VKDVD + +++ + ++PYGLLVW+ G L
Sbjct: 357 TLIKYTESTFKENSIDLLTKHMVKDVDERDVLVKTPSGEDKKIPYGLLVWAAGNTARPLT 416
Query: 193 KSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+ L LP+S R G +D+ +R+ +D +FA+GD + T AQ A +Q
Sbjct: 417 RQLMGALPESQKNRRGLEVDDHMRLKGAEDSIFALGDATA-------TQFAPTAQAASQQ 469
Query: 248 GKYLFSLLNRIGKAG-------------------GGRANSAKDMELGDPFVYRHLGSMAT 288
G YL + N++ + G + PF Y H GS+A
Sbjct: 470 GAYLARVFNQLARLNVLETKLADAKKANADASELSGLERQIEKAAKIRPFKYSHQGSLAY 529
Query: 289 IGRYKALVD---LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG KA+ D L N+ + G G ++++ WRSAY++ + S RNR VA +W F+F
Sbjct: 530 IGSEKAIADIPLLGNNQIASG----GVVTFMFWRSAYVSMLFSLRNRSLVAADWFKVFLF 585
Query: 346 GRDISR 351
GRD+SR
Sbjct: 586 GRDVSR 591
>gi|388852031|emb|CCF54387.1| related to NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Ustilago hordei]
Length = 577
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/410 (34%), Positives = 209/410 (50%), Gaps = 77/410 (18%)
Query: 10 DELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL----- 64
D + E + + YD LVI +G+ +TFG GVKENA FL++V+ A+ IR ++L
Sbjct: 178 DPAKKRERATYTMPYDHLVICVGSYNATFGTRGVKENALFLKDVNDARAIRWRILDCFEL 237
Query: 65 ----LNLMLSD-------VPGISEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQ 112
LNL+ S P SE + R LL +VVGGGPTG EF+ EL D I +D+ +
Sbjct: 238 ANARLNLLTSSSSGCPNASPTPSEASEMRDLLSFIVVGGGPTGSEFAAELHDLIKQDLSR 297
Query: 113 RYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN 170
Y + Y + L++A + ILSSFD L +A + ++ G+ +V + V+ + L+
Sbjct: 298 LYPRLGPYASIKLLDAGSTILSSFDSSLSEFAMRKFARDGIEVVLNAKISRVERDAVYLH 357
Query: 171 DGTEVPYGLLVWSTGVGPSTLVKSLD----------LPKSPG------------GRIGID 208
G + G++VWSTG+ S L+++L+ + SP G +G
Sbjct: 358 GGERIAAGMVVWSTGITTSPLIEALEGVGKEERSGKILTSPTLNILAHRQAVEKGAVGGS 417
Query: 209 EWLRVPSVQ--------------DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
P+ + +VFA+GDCS L+ T LPA AQVA ++G YL +L
Sbjct: 418 VLNHKPNCKPESQAEKEELVPLPNVFALGDCSSILD----TPLPATAQVASQKGNYLANL 473
Query: 255 LNR------------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
N+ I GG + S+ + +PF + GSMA+IG +AL+D K
Sbjct: 474 FNKHMVTSQPQPLASINGFGGLKNGSSATLAQANPFKFLDKGSMASIGSKQALLDTPVKK 533
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
ES G L+W++WRSAY +SWRN F V NWA+ +FGRD+ R
Sbjct: 534 ES------GRLAWVLWRSAYTLMSMSWRNCFLVPANWASNLLFGRDVGRF 577
>gi|326426832|gb|EGD72402.1| hypothetical protein PTSG_00422 [Salpingoeca sp. ATCC 50818]
Length = 502
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 207/365 (56%), Gaps = 36/365 (9%)
Query: 2 KVHCETV---TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQE 58
KV C++ DE EP +F I YD LV+ +GA +TFG+ GVKE+A FL+E A++
Sbjct: 160 KVMCQSAVYSNDE----EPERFPIPYDFLVVGIGAVPNTFGVPGVKEHAFFLKEASDARD 215
Query: 59 IRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 118
+RR++ + P + +E LL VVVGGGPTGVEF+ EL+DF+ D + Y H++
Sbjct: 216 VRRRIHDCFEAASFPMKTAQEIEDLLTFVVVGGGPTGVEFAAELTDFLREDCTRLYPHIQ 275
Query: 119 DYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSG--VRLVRGIVKDVDSQKLILNDGTEV 175
V L+EA+ +LS+FD LR YA +L + VRL R VK+V +++L++G +
Sbjct: 276 HRPRVILLEASGAVLSAFDSSLRQYALRRLERQDCHVRLGRS-VKEVKRHEVVLDNGEVI 334
Query: 176 PYGLLVWSTGVGPSTLVKSLD--LPKSPGGRIGIDEWLRVPSVQDVFAVGDCS---GYLE 230
+VWSTGVGP LVKSLD I +D L++ + Q+ FA GDC+ GY
Sbjct: 335 NTHCIVWSTGVGPRALVKSLDERYLTENKQHIRVDRGLKIANTQNAFAYGDCARIDGY-- 392
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG-DPFVYRHLGSMATI 289
+LPA+AQVAE+QGK+L NR + E+G D F + G +A +
Sbjct: 393 -----ILPAVAQVAEQQGKFLADEFNR----------ATPQREVGCDTFKFASSGMLAYL 437
Query: 290 GRYK--ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G Y A + + + + L+G +WLVWR YLT++ WRNR V +W T +FGR
Sbjct: 438 GHYGGVAKIAVPTPDDVTNVKLSGLTAWLVWRMGYLTKLGRWRNRLQVPFDWLKTMIFGR 497
Query: 348 DISRI 352
D ++
Sbjct: 498 DPTKF 502
>gi|322701645|gb|EFY93394.1| pyridine nucleotide-disulfide oxidoreductase, putative [Metarhizium
acridum CQMa 102]
Length = 488
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 197/362 (54%), Gaps = 50/362 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G + TFGI GVKE+A FLR+V A+ IR ++L +D+P S+E
Sbjct: 149 EFDVKYDKLVIAVGCYSQTFGIEGVKEHAHFLRDVGDARAIRLQVLQAFETADLPTTSDE 208
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ +LLH VVGGGPTG+EF+ EL D I D+ + Y ++ + +T+ + A ++L FD
Sbjct: 209 ERKKLLHFAVVGGGPTGIEFAAELHDLIKDDLSRMYPKLQRHCAITVYDIAPKVLPMFDS 268
Query: 138 RLRHYATTQLSKSGVR------LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
+L YAT + G+R L R + I + EV G++VWSTG+ + L
Sbjct: 269 KLAAYATETFKRQGIRVKTEHHLTRIRRQGHHLMLQIKEEPDEVGAGIVVWSTGLMQNPL 328
Query: 192 VKSL---------DLPKSP-GGRIGIDEWLRV-----------PSVQDVFAVGDCSGYLE 230
VK+L + K P G I + L+V +++DV+AVGDC
Sbjct: 329 VKTLVESDIEGTGKIAKDPRTGSIVTNPNLQVQLQGPGDGSETTTLKDVYAVGDCI---- 384
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIG 290
S PA AQVA +Q YL LN+ D E PF +++ G M +G
Sbjct: 385 SVQGASYPATAQVASQQAVYLAKQLNK------------GDKEASRPFKFKNWGVMTYLG 432
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
++A+ +S+ L G+ +W++WR+AYLTR +S RN+ + V W T++FGRDIS
Sbjct: 433 SWRAI------HQSEADYLRGWAAWVLWRTAYLTRSMSVRNKIMIPVYWVITWIFGRDIS 486
Query: 351 RI 352
R
Sbjct: 487 RF 488
>gi|443894758|dbj|GAC72105.1| NADH-dehydrogenase [Pseudozyma antarctica T-34]
Length = 589
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 200/366 (54%), Gaps = 44/366 (12%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K I YD LV ++G E TFGI GVK++A FL+E+ A++IR +L+ + + + G SEE
Sbjct: 234 KVTIPYDYLVYSVGTENQTFGIEGVKKHACFLKELSDAEKIRARLIDCVESAAIKGQSEE 293
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLLH VVVGGGPTG+E++ EL DF+ D+ + Y V + + VTL+EA IL F
Sbjct: 294 EIDRLLHMVVVGGGPTGIEYAAELRDFVESDLIRWYPEVANKLRVTLVEALPNILPMFSQ 353
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPSTLV 192
L Y + ++ + L + +VKDVD + +++ + ++PYGLLVW+ G L
Sbjct: 354 TLIKYTESTFKENSIDILTKHMVKDVDERDVLVKTPSGEEKKIPYGLLVWAAGNTARPLT 413
Query: 193 KSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+ L LP+ R G +D+ +R+ +D VFA+GD + T AQ A +Q
Sbjct: 414 RQLMAALPEHQKNRRGLEVDDHMRLKGAEDSVFALGDATA-------THFAPTAQAASQQ 466
Query: 248 GKYLFSLLNRIG------------KAGGGRANSAKDMELG-------DPFVYRHLGSMAT 288
G YL + N++ K G A+ +E PF Y H GS+A
Sbjct: 467 GAYLARVFNQLARLQVLEDKLAASKKAGADASELSGIERQIEKAAKIRPFKYSHQGSLAY 526
Query: 289 IGRYKALVD---LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG KA+ D L N+ + G G ++++ WRSAY++ + S RNR VA +W F+F
Sbjct: 527 IGSEKAIADIPLLGNNQIASG----GVVTFMFWRSAYVSMLFSLRNRSLVAADWFKVFLF 582
Query: 346 GRDISR 351
GRD+SR
Sbjct: 583 GRDVSR 588
>gi|299473176|emb|CBN78752.1| NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus]
Length = 620
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 207/417 (49%), Gaps = 75/417 (17%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
+ CE V E T F++ YD LV+++GA +TF GV E+ FL++V AQ++R+
Sbjct: 212 ITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKA 271
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
+ +++P ++EE++ L +VG GPTGVE EL DFI + + Y H+ Y+
Sbjct: 272 IGNCFERANLPTVTEEQRIAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVR 331
Query: 123 VTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLV--------------RGIVKDVDSQKL 167
+ LIEA +++LS FD L+ A + L++ +L+ + VK V +L
Sbjct: 332 IKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDDGFIETEMTEVLLKVGVKAVTGTQL 391
Query: 168 ILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPG----------GRIGIDEWLRVPSVQ 217
L+DG+ +PYGL VW+ G GP LV LDL + GR+ D+WLR+
Sbjct: 392 ELSDGSNIPYGLAVWAAGNGPLPLV--LDLIQGVEEQKEKAAWGRGRLVTDDWLRLLGAP 449
Query: 218 DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR-------------------- 257
VFA+GDC+ LP AQVA +QG YL L +R
Sbjct: 450 SVFALGDCA----VINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEA 505
Query: 258 ---------------IGKAGGGRANSAKDMEL-------GDPFVYRHLGSMATIGRYKAL 295
+G+ GG + ++ + L PF + +LG +A G AL
Sbjct: 506 AAGGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGAL 565
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++ KES + G +L+WRS YL++ VSWRNR V +W T +FGRDI+R+
Sbjct: 566 AQVQVGKES--VKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITRL 620
>gi|390595666|gb|EIN05070.1| FAD/NAD(P)-binding domain-containing protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 495
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 208/346 (60%), Gaps = 26/346 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LV+A+GA ++TFGI GVKENA FL+ V+ A+ IR ++L ++ +PG+S+EE
Sbjct: 163 FTMEYDILVVAVGAYSATFGIPGVKENAHFLKNVNDARAIRARILECFEIAAMPGLSDEE 222
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ R+L VVVGGGPTGVE++ EL D + D+ + Y + I +TL + A IL +FD
Sbjct: 223 RKRVLSFVVVGGGPTGVEWAAELHDLVSSDIPRYYPSLVPLISITLYDVAPHILGNFDSS 282
Query: 139 LRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-D 196
L+ YA + ++ +R+ R V+ V+ + + + +P+GL VWSTG+ + LV ++ +
Sbjct: 283 LQAYAEKKFARDNIRIRGRRTVEKVEPGWITIKEEGRIPFGLCVWSTGLAVNPLVAAIKE 342
Query: 197 LPK-SPGGRIGIDEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+PK G + DE LR ++DV+A+GDC+G G VLPA AQVA+++
Sbjct: 343 IPKGQKGATLLTDERLRALDASTDNKPMRDVYAIGDCAGV---AGGPVLPATAQVAQQKA 399
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+L LNR K+G D PF +++ GS+A IG ++ALVD + + GL
Sbjct: 400 LHLAKELNRAAKSG--------DAYQPVPFEFKNRGSLAYIGGWQALVD--RTSAASGLK 449
Query: 309 --LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
AG ++WL+WRSAY T VS RN+ + W ++ GRDISR
Sbjct: 450 GGNAGRMAWLIWRSAYFTMSVSVRNKILIPTYWFLNWILGRDISRF 495
>gi|241953089|ref|XP_002419266.1| mitochondrial external NADH-ubiquinone oxidoreductase precursor,
putative [Candida dubliniensis CD36]
gi|223642606|emb|CAX42856.1| mitochondrial external NADH-ubiquinone oxidoreductase precursor,
putative [Candida dubliniensis CD36]
Length = 574
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 205/360 (56%), Gaps = 38/360 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV EN+TFL+EV A IRRKL+ + +++ + E+
Sbjct: 222 LNYDYLVVGVGAQPSTFGIPGVAENSTFLKEVSDASAIRRKLMDVIEAANILPEDDPERK 281
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GE+ D+I +D+++ V D + V+L+EA +L++F+ +L
Sbjct: 282 RLLSIVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELKVSLVEALPNVLNTFNKKLI 341
Query: 141 HYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPST- 190
Y + + L+ ++K V+ + LI N DG+ E+PYGLL+W+TG P
Sbjct: 342 EYTKEVFKDTNINLMTNTMIKKVNDKSLIANHKNPDGSTETIEIPYGLLIWATGNAPRNF 401
Query: 191 ---LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L+ +D K+ + +DE L+V ++FA+GDC+ T P AQVA ++
Sbjct: 402 TRDLISKVDEQKNARRGLLVDERLKVDGTDNIFALGDCTF-------TKYPPTAQVAFQE 454
Query: 248 GKYLFSLLNRIGKAGGGR---AN-SAKD-----------MELGDP-FVYRHLGSMATIGR 291
G+YL + +++ + AN + KD +E P F+Y + GS+A IG
Sbjct: 455 GEYLANYFDKLHAVESLKYTIANPTPKDNVEKLSRKLARLEKNLPHFIYNYQGSLAYIGS 514
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KA+ DL S +S G ++L WRSAY+ +S +N+ V ++WA + FGRD S+
Sbjct: 515 EKAVADLVWGDWS-NISSGGSFTFLFWRSAYIYMCLSVKNQVLVVLDWAKVYFFGRDCSK 573
>gi|238880749|gb|EEQ44387.1| hypothetical protein CAWG_02654 [Candida albicans WO-1]
Length = 574
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 206/360 (57%), Gaps = 38/360 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV EN+TFL+EV A IRRKL+ + +++ + E+
Sbjct: 222 LNYDYLVVGVGAQPSTFGIPGVAENSTFLKEVSDASAIRRKLMDVIEAANILPKDDPERK 281
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GE+ D+I +D+++ V D + V+L+EA +L++F+ +L
Sbjct: 282 RLLSIVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELKVSLVEALPNVLNTFNKKLI 341
Query: 141 HYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGP--- 188
Y + + L+ ++K V+ + LI N DG+ E+PYGLL+W+TG P
Sbjct: 342 DYTKEVFKDTNINLMTNTMIKKVNDKSLIANHKNPDGSTESIEIPYGLLIWATGNAPRDF 401
Query: 189 -STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L+ +D K+ + +DE L+V ++FA+GDC+ T P AQVA ++
Sbjct: 402 TRDLIAKVDEQKNARRGLLVDERLKVDGTDNIFALGDCTF-------TKYPPTAQVAFQE 454
Query: 248 GKYLFSLLNRIGKAGGGR---AN-SAKD-----------MELGDP-FVYRHLGSMATIGR 291
G+YL + +++ + AN + KD +E P F+Y + GS+A IG
Sbjct: 455 GEYLANYFDKLHAVESLKYTIANPTPKDNVEKLSRKLARLEKNLPHFIYNYQGSLAYIGS 514
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KA+ DL S +S G L++L WRSAY+ +S +N+ V ++WA + FGRD S+
Sbjct: 515 EKAVADLVWGDWS-NISSGGNLTFLFWRSAYIYMCLSVKNQVLVVLDWAKVYFFGRDCSK 573
>gi|68471721|ref|XP_720167.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|68471982|ref|XP_720034.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|32812377|emb|CAB77710.2| NADH dehydrogenase [Candida albicans]
gi|46441884|gb|EAL01178.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|46442022|gb|EAL01315.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
Length = 574
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 206/360 (57%), Gaps = 38/360 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV EN+TFL+EV A IRRKL+ + +++ + E+
Sbjct: 222 LNYDYLVVGVGAQPSTFGIPGVAENSTFLKEVSDASAIRRKLMDVIEAANILPKDDPERK 281
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GE+ D+I +D+++ V D + V+L+EA +L++F+ +L
Sbjct: 282 RLLSIVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELKVSLVEALPNVLNTFNKKLI 341
Query: 141 HYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGP--- 188
Y + + L+ ++K V+ + LI N DG+ E+PYGLL+W+TG P
Sbjct: 342 DYTKEVFKDTNINLMTNTMIKKVNDKSLIANHKNPDGSTESIEIPYGLLIWATGNAPRDF 401
Query: 189 -STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L+ +D K+ + +DE L+V ++FA+GDC+ T P AQVA ++
Sbjct: 402 TRDLIAKVDEQKNARRGLLVDERLKVDGTDNIFALGDCTF-------TKYPPTAQVAFQE 454
Query: 248 GKYLFSLLNRIGKAGGGR---AN-SAKD-----------MELGDP-FVYRHLGSMATIGR 291
G+YL + +++ + AN + KD +E P F+Y + GS+A IG
Sbjct: 455 GEYLANYFDKLHAVESLKYTIANPTPKDNVEKLSRKLARLEKNLPHFIYNYQGSLAYIGS 514
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KA+ DL S +S G L++L WRSAY+ +S +N+ V ++WA + FGRD S+
Sbjct: 515 EKAVADLVWGDWS-NISSGGNLTFLFWRSAYIYMCLSVKNQVLVVLDWAKVYFFGRDCSK 573
>gi|19115108|ref|NP_594196.1| NADH dehydrogenase (predicted) [Schizosaccharomyces pombe 972h-]
gi|74675950|sp|O14121.1|NDH1_SCHPO RecName: Full=Probable NADH-ubiquinone oxidoreductase C3A11.07,
mitochondrial; Flags: Precursor
gi|2414635|emb|CAB16382.1| NADH dehydrogenase (predicted) [Schizosaccharomyces pombe]
Length = 551
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 200/385 (51%), Gaps = 45/385 (11%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
+H + T + LE +I YD LV + GAE TF I G+ E FL+E+ AQ+IR +
Sbjct: 177 IHIKKTTTDGVDLEQ---EIKYDYLVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKIRAR 233
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
+L L + + E + R +H VVVGGGPTG+EF+GE++DFI D++ Y + D
Sbjct: 234 ILHCLEQAQFKDLPAETRRRYVHTVVVGGGPTGMEFAGEMADFIEDDLKSWYPELADDFA 293
Query: 123 VTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE-- 174
VTL+EA +L F +LR Y + S +++ +K V ++ + + DG++
Sbjct: 294 VTLVEALPSVLPMFSAKLRDYTQSLFDSSHIKIRTNTALKKVTAENIHVEVKNPDGSKQE 353
Query: 175 --VPYGLLVWSTGVGPSTLVKSL-DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYL 229
+PYGLLVW+ G L K L + + R G +DE+L++ +D+FA+GDC+
Sbjct: 354 EVIPYGLLVWAGGNRARPLTKKLMEGSEEQNNRRGLVVDEYLKLKGYKDIFALGDCT--- 410
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD------------- 276
T AQVA +QG YL L N++G + + + + LGD
Sbjct: 411 ----HTAYAPTAQVASQQGAYLGQLFNKLGSLNFEKPSEDRHIALGDEMDSSTLISLANE 466
Query: 277 ---------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVV 327
PF Y H GS+A +G KA+ D+ K L +G L++ WRS YL+ +
Sbjct: 467 KHASTKVFLPFKYSHQGSLAYVGHEKAIADIEVPWFGKQLHASGALAFYFWRSVYLSELY 526
Query: 328 SWRNRFYVAVNWATTFVFGRDISRI 352
S RNR V ++W +FGRDIS +
Sbjct: 527 SLRNRTNVTLDWIRVKLFGRDISSL 551
>gi|400599281|gb|EJP66985.1| pyridine nucleotide-disulfide oxidoreductase, putative [Beauveria
bassiana ARSEF 2860]
Length = 498
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 199/382 (52%), Gaps = 52/382 (13%)
Query: 1 MKVHCETVTDELRTLEPW-KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 59
M + T LR E +F I+YDKLVIA+G + TFG GV + A+FLR+V A+ I
Sbjct: 139 MSAAAGSKTSPLRGPEKGPEFDITYDKLVIAVGCYSQTFGTEGVAQYASFLRDVGDARAI 198
Query: 60 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 119
R K+L +D+P ++ E+ LL+ +VGGGPTG+EF+ EL D + D+ + Y +
Sbjct: 199 RLKVLTAFEKADLPSTTDAERGELLNFAIVGGGPTGIEFAAELHDLVHEDLAKLYPSLMK 258
Query: 120 YIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDG 172
++ VT+ + A ++L FD L YA + G+++ ++ I + D KL I
Sbjct: 259 FVQVTVYDIAPKVLPMFDQALASYAMDLFHRQGIQVKTEHSLQSIRRQGDILKLRIKGHD 318
Query: 173 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPG----------GRIGIDEWLRV--------- 213
EV GLLVWSTG+ + LV L PG G I D +RV
Sbjct: 319 AEVGAGLLVWSTGLMQNPLVAKLLEQDIPGLGRIVKDARTGGIMTDGHMRVLTGLEAGGD 378
Query: 214 ---PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAK 270
+ DVFA+GDC+ E LPA AQVA +Q +L +N+
Sbjct: 379 GPRKPLPDVFAIGDCTVQEEHR----LPATAQVASQQAAWLGKRINK------------G 422
Query: 271 DMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 330
DM+ D F +R+ G+MA +G +A+ + L G+ +W++WR+AYLT+ +SWR
Sbjct: 423 DMDTADEFKFRNWGAMAYLGSKRAI------HQHGADGLKGWPAWILWRTAYLTKSMSWR 476
Query: 331 NRFYVAVNWATTFVFGRDISRI 352
N+F + W T +FGRDISR
Sbjct: 477 NKFKIPFQWLITALFGRDISRF 498
>gi|453081740|gb|EMF09788.1| FAD/NAD(P)-binding domain-containing protein [Mycosphaerella
populorum SO2202]
Length = 514
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 199/362 (54%), Gaps = 52/362 (14%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
FK+SYDKLV +G A TF GVKE A FL++V A++IR +LL ++ +P SEE
Sbjct: 176 FKLSYDKLVCTVGCYAQTFNTPGVKEYAYFLKDVGDARKIRNRLLSCFEVAALPTTSEEM 235
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K L+ VVGGGPTG+E+S EL D I D+++ Y + Y+ +T+ + AN++L FD+
Sbjct: 236 KRTYLNFAVVGGGPTGIEWSAELYDMIHEDMKRLYPELIQYVSITVYDVANKVLGMFDES 295
Query: 139 LRHYATTQLSKSGV---------RLVRGIVKDVDSQKLI----------LNDGTEVPYGL 179
L YA S+ G+ L RG+ K ++ ++ + + EV G+
Sbjct: 296 LSQYAMKTFSRQGIHIKTSHHIEELRRGVPKAQEASSVVKDASHVYTLKVKEEGEVGVGM 355
Query: 180 LVWSTGVGPSTLVKSLDLPK----SPGGRIGIDEWLRVPS-----VQDVFAVGDCSGYLE 230
+VWSTG+ + V++ K G I +E L+V ++DV+A+GDC+ LE
Sbjct: 356 VVWSTGLLANPFVQNGLQDKVKKHERSGSILTNERLQVKDKNDRPIEDVYALGDCA-ILE 414
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIG 290
T PA AQVA ++ +L N+ D+E F Y++LG MA IG
Sbjct: 415 GTA---YPATAQVASQKAVWLAKRFNK------------GDIE-SQEFTYKNLGVMAYIG 458
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA++ E KG +++G ++WL+WR AYLT+ VS RN+ + + W+ ++FGRDIS
Sbjct: 459 NKKAIL------EGKGANISGRIAWLIWRGAYLTKTVSLRNKILIPIYWSINWIFGRDIS 512
Query: 351 RI 352
R
Sbjct: 513 RF 514
>gi|302916961|ref|XP_003052291.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733230|gb|EEU46578.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 484
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 204/374 (54%), Gaps = 54/374 (14%)
Query: 10 DELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLML 69
D L+ LE F++ YDKLV+A+G + TFG+ GVKE+A FLR+ A+ +R K+L
Sbjct: 134 DLLKGLE---FQVPYDKLVVAVGCYSQTFGVEGVKEHACFLRDATDARTVRLKVLQKFEQ 190
Query: 70 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-A 128
+ +P S+ ++ RLLH VVGGGPTG+EF+ EL D I D+ + Y + +++ +T+ + A
Sbjct: 191 AALPSASDVQRKRLLHFAVVGGGPTGIEFAAELHDLIHEDLAKMYPELMEHVAITIYDIA 250
Query: 129 NEILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVW 182
++L FD L YAT S+ G+R+ ++ I +D D + I + EV G++VW
Sbjct: 251 PKVLPMFDRNLAAYATNMFSRRGIRVKTEHHLQRIREDGDVLLMKIKEEPEEVAAGVVVW 310
Query: 183 STGVGPSTLVKSLDLPKSPG----------GRIGIDEWLRV-------------PSVQDV 219
STG+ + LV L + G G I +DE LRV S+ DV
Sbjct: 311 STGLMQNPLVGRLVGQEVKGAGTIAKDSKTGGIKVDEHLRVQVESQDNNGNTITKSLPDV 370
Query: 220 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV 279
FA+GDC+ G++ PA AQVA +Q YL N A ++ PF
Sbjct: 371 FAIGDCA---VVQGRS-FPATAQVASQQATYLGKRFN---------AGTSSQGAPTAPFH 417
Query: 280 YRHLGSMATIGRYKALVDLRQNKESKGL-SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
+R+ G+MA +G ++A+ KG L G +W++WR+AYLT+ +S +N+ +
Sbjct: 418 FRNWGTMAYLGGWRAI-------HQKGADELKGRAAWILWRTAYLTKSMSLKNKIMIPFY 470
Query: 339 WATTFVFGRDISRI 352
W T++FGRDISR
Sbjct: 471 WLITWIFGRDISRF 484
>gi|213404038|ref|XP_002172791.1| external NADH-ubiquinone oxidoreductase [Schizosaccharomyces
japonicus yFS275]
gi|212000838|gb|EEB06498.1| external NADH-ubiquinone oxidoreductase [Schizosaccharomyces
japonicus yFS275]
Length = 499
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 197/365 (53%), Gaps = 53/365 (14%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+K+ TD+ + E ++ YD LV ++GA+ TFGI GV EN L+EV AQ+IR
Sbjct: 175 LKIRSAVTTDDKQIEE----ELKYDYLVFSIGADVQTFGIPGVLENGCQLKEVWDAQKIR 230
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
+L L + +PG+S EE+ R LH VVVGGGPTG+EFS E+ DFI D+++ Y + D
Sbjct: 231 AHVLRCLEQASLPGLSPEERKRYLHTVVVGGGPTGMEFSAEMGDFIRHDLKKWYPDLADD 290
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILND---- 171
VTL+EA +L F ++ R YA + SG+ + R +K+ ++L + +D
Sbjct: 291 FQVTLLEALPSVLPMFTEKGRMYAVKHFADSGINIQTRTALKEATKEELHVEVTDDQGNK 350
Query: 172 -GTEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCSG 227
+PYGLLVW+ G P L +SL LP+ R + ID++++V ++DV+A+GDC+
Sbjct: 351 TKKTIPYGLLVWAGGNKPRQLTQSLISSLPEQTNRRGLMIDDFMQVKGLKDVWAIGDCT- 409
Query: 228 YLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMA 287
T A AQVAE+QG YL LN++ + + KD+E
Sbjct: 410 ------TTQFAATAQVAEQQGIYLGQQLNKLARL------TFKDVE-------------- 443
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
L+Q + LS G ++ WR+ YL+ + + RNR VA +W +FGR
Sbjct: 444 ---------SLQQTPVIQNLSAHGLPAFYFWRATYLSELDTIRNRTNVAFDWMRINMFGR 494
Query: 348 DISRI 352
DIS +
Sbjct: 495 DISSL 499
>gi|449016035|dbj|BAM79437.1| NADH dehydrogenase type II [Cyanidioschyzon merolae strain 10D]
Length = 628
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/363 (37%), Positives = 201/363 (55%), Gaps = 32/363 (8%)
Query: 9 TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 68
TDE+ + +F++ Y V+ +G+ +TF G KEN FL+E+ A++IR +++
Sbjct: 279 TDEIIGIR--EFEVPYTYCVVGVGSAVNTFNTPGAKENCFFLKEIPDARKIRSEVVRIFE 336
Query: 69 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128
+++P S+EE+SRLLH VVVGGGPTGVEF+GEL DF++ D + Y + Y+ VTL+++
Sbjct: 337 EANLPETSDEERSRLLHFVVVGGGPTGVEFAGELHDFLVEDAVKYYKKLLKYVQVTLLQS 396
Query: 129 NE-ILSSFDDRLRHYATTQLS------KSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLV 181
+ IL+ FD L+ A L ++G R+VR + ++ L DG +PYG+ V
Sbjct: 397 GQSILTQFDKSLQDRALQNLRDAEINVRTGSRVVR-----ITETEIYLQDGAVIPYGMCV 451
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGR---IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV 236
W+ GVGP LV L +P + + +D+WLRV + VFA GDC+ L
Sbjct: 452 WAAGVGPQKLVTDLIESIPAQTTFKKRQLVVDDWLRVIGAEGVFAAGDCATNLHEP---- 507
Query: 237 LPALAQVAERQGKYLFSLLNR-------IGKAGGGRANSAKDMELGDPFVYRHLGSMATI 289
LPA AQVA +QG YL LLNR I + PF + G +A I
Sbjct: 508 LPATAQVAGQQGAYLARLLNREYCLDCDIPERTEYTRTWIDRARFAKPFQFLSFGLLAYI 567
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
GR +A+ + S + L+G L++L+WRS Y + VS RNR + +W +FGRDI
Sbjct: 568 GRERAMAQIEMGDTS--VKLSGTLTYLIWRSVYAVKQVSMRNRILITFDWIKAAIFGRDI 625
Query: 350 SRI 352
S+
Sbjct: 626 SQF 628
>gi|342885841|gb|EGU85793.1| hypothetical protein FOXB_03641 [Fusarium oxysporum Fo5176]
Length = 2310
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 205/373 (54%), Gaps = 54/373 (14%)
Query: 10 DELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLML 69
D L+ LE F++ YDKLV+A+G + TFG+ GVKE+A FLR+ A+ +R K+L
Sbjct: 1960 DLLKGLE---FQVPYDKLVVAVGCYSQTFGVEGVKEHACFLRDATDARTVRLKVLQKFEQ 2016
Query: 70 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-A 128
+ +P S ++ RLLH VVGGGPTG+E++ EL D I D+ + Y + ++ +T+ + A
Sbjct: 2017 ASLPSTSVAQRKRLLHFAVVGGGPTGIEYAAELHDLIHEDLAKLYPELMPHVAITIYDIA 2076
Query: 129 NEILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVW 182
++L FD L YAT+ S++G+++ ++GI +D D + I + EV G++VW
Sbjct: 2077 PKVLPMFDRNLAAYATSIFSRAGIKVKTEHHLQGIRRDEDVLLMRIKEEPEEVAAGVVVW 2136
Query: 183 STGVGPSTLVKSLDLPKSPG----------GRIGIDEWLRV-------------PSVQDV 219
STG+ + LV L + G G +D LRV ++ DV
Sbjct: 2137 STGLMQNPLVGKLVGREVEGMGKIAKNCKTGGFAVDSHLRVQVEAQDSNGKQITKTLPDV 2196
Query: 220 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV 279
+A+GDC+ G++ LPA AQVA +Q YL N G + G + PF
Sbjct: 2197 YAIGDCANI---QGES-LPATAQVASQQATYLGKRFN-AGTSSQGPPTA--------PFH 2243
Query: 280 YRHLGSMATIGRYKALVDLRQNKESKGL-SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
+R+ G+MA +G ++A+ KG L G +W++WR+AYLT+ +S +N+ +
Sbjct: 2244 FRNWGTMAYLGGWRAI-------HQKGTDELKGRAAWILWRTAYLTKSMSLKNKLMIPFY 2296
Query: 339 WATTFVFGRDISR 351
W T++FGRDISR
Sbjct: 2297 WLVTWIFGRDISR 2309
>gi|322707243|gb|EFY98822.1| pyridine nucleotide-disulfide oxidoreductase, putative [Metarhizium
anisopliae ARSEF 23]
Length = 487
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 200/362 (55%), Gaps = 50/362 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G + TFGI GVKE+A FLR+V A+ IR ++L +D+P S+E
Sbjct: 148 EFDVKYDKLVIAVGCYSQTFGIEGVKEHANFLRDVGDARAIRLQVLQAFETADLPTTSDE 207
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ +LLH VVGGGPTG+EF+ EL D I D+ + Y ++ + +T+ + A ++L FD
Sbjct: 208 ERKKLLHFAVVGGGPTGIEFAAELHDLIKDDLSRMYPKLQKHCAITVYDIAPKVLPMFDS 267
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL-----NDGTEVPYGLLVWSTGVGPSTL 191
+L YAT + G+R+ + + Q +L + EV G++VWSTG+ + L
Sbjct: 268 KLAAYATETFKRQGIRVKTEHHLTRIRRQGHVLMLQIKEEPEEVGAGIVVWSTGLMQNPL 327
Query: 192 VKSL---------DLPKSP--GGRI----------GIDEWLRVPSVQDVFAVGDCSGYLE 230
VK+L + K P GG + G + +++DV+AVGDC+
Sbjct: 328 VKTLVESDIEGVGKIAKDPRTGGIVTNPNLQVQLQGAGDGSETTTLKDVYAVGDCT---- 383
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIG 290
S PA AQVA +Q YL LNR D E PF +++ G M +G
Sbjct: 384 SVQGASYPATAQVAAQQAVYLAKQLNR------------GDKEASKPFKFKNWGVMTYLG 431
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
++A+ +S+ +L G+ +W++WR+AYLTR +S RN+ + V W T++FGRDIS
Sbjct: 432 SWRAI------HQSEADNLRGWAAWVLWRTAYLTRSMSVRNKIMIPVYWVITWIFGRDIS 485
Query: 351 RI 352
R
Sbjct: 486 RF 487
>gi|326491059|dbj|BAK05629.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 199/364 (54%), Gaps = 43/364 (11%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K I YD LV A+GAE TFGI GVKE A FL+E+ A IRRKLL + + G +EE
Sbjct: 214 KVTIPYDYLVYAVGAENQTFGIKGVKEYACFLKELKDADRIRRKLLDCIETAAFAGQTEE 273
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RL+H VVVGGGPTGVE++GEL DF++ D+R+ Y + D + +TLIEA +L +F
Sbjct: 274 EIERLMHMVVVGGGPTGVEYAGELHDFLIDDLRKWYPEIADKLRITLIEALPNVLPAFSK 333
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLV 192
+L Y + ++ + L R +VKDV + +++ D E+PYGLLVW+TG +
Sbjct: 334 QLIQYTESTFKENKIDVLTRTMVKDVREKSVVVQDANKEIKEIPYGLLVWATGNTSREIT 393
Query: 193 KSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
++L LP+ R G +D +R+ ++FA+GDC+ T AQ A +QG
Sbjct: 394 RNLMAKLPEHQTQRRGLVVDGHMRLAGAPEIFALGDCTA-------TSYAPTAQAASQQG 446
Query: 249 KYLFSLLNRIG--------------KAGGG-------RANSAKDMELGDPFVYRHLGSMA 287
YL ++ KA G R N A D+ PF Y H GS+A
Sbjct: 447 TYLARTFAKMAQAEKLKEQLAEMREKAPGDDVERTVKRLNKALDLP---PFHYSHQGSLA 503
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
IG KA+ DL + + G ++L WRSAY++ + S RNR V ++W +FGR
Sbjct: 504 YIGSEKAIADLPFF--NGNFASGGVATYLFWRSAYVSTLYSARNRTLVILDWMKVKIFGR 561
Query: 348 DISR 351
D+SR
Sbjct: 562 DVSR 565
>gi|353240387|emb|CCA72259.1| probable NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Piriformospora indica DSM 11827]
Length = 564
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 197/360 (54%), Gaps = 39/360 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I+YD LV ALGAE TFGI G KEN+ FL+E+ A+++R K + + + PG ++ E
Sbjct: 213 INYDYLVYALGAETQTFGIPGAKENSCFLKELWDAEQLRSKTMDCIESAVFPGQTDSEVD 272
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH +VVGGGPTGVE +GE+ DF++ D+++ Y + D + +TLIEA +L F +L
Sbjct: 273 RLLHMIVVGGGPTGVELAGEMHDFVVEDLKKWYPELADRVRITLIEALPNVLPMFSKQLI 332
Query: 141 HYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L+ R +V+++ + +++ D + E+P+GLLVW+ G + K L
Sbjct: 333 AYTESTFKQNKIDLLTRTMVQEIKPKSVVVKDPSGNKVEIPFGLLVWAGGNTMRPITKDL 392
Query: 196 --DLPKSPGGRIGI---DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ + + G+ D + S +++ GDC+ T AQVA +QG Y
Sbjct: 393 MAKMGQHQTNKRGLTVDDHMVLAGSNGTIYSFGDCTA-------TSYAPTAQVAAQQGAY 445
Query: 251 LFSLLNRIGKAGGGRAN-----------------SAKDMELG--DPFVYRHLGSMATIGR 291
+ L N++ + A S K +++ PF Y H GS+A IG
Sbjct: 446 VGRLFNQLAQQARLEAELEELKRSKAELHEIDSVSKKLLKVSKYKPFHYSHQGSLAYIGS 505
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KA+ DL + +S G ++L WRSAYL+ + S RNR V ++W F+FGRD+SR
Sbjct: 506 DKAIADL--PFLNGNISSGGVATFLFWRSAYLSNLFSLRNRSLVMLDWVKVFIFGRDVSR 563
>gi|393244441|gb|EJD51953.1| FAD/NAD(P)-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 476
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 197/355 (55%), Gaps = 33/355 (9%)
Query: 13 RTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV 72
R LE F I YD+LVIA+GA + TFGI GVKE+A L+ V A+ IR ++ + +
Sbjct: 140 RALE--SFTIPYDRLVIAVGAYSQTFGIPGVKEHAFVLKNVDDARAIRSHIMSCFEQASL 197
Query: 73 PGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEI 131
P S E+ RLL+ +VGGGPTG EF+ EL D + R++ + V + +T+ + A +I
Sbjct: 198 PNTSVAEQRRLLNFCIVGGGPTGCEFAAELHDLLARELNAAFPSVAKHARITVYDVAPQI 257
Query: 132 LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 190
L SFD L YA + ++ G+ + G ++ V L + + EVPYG+LVWSTG+ P+
Sbjct: 258 LGSFDAGLVDYAVKRFAREGIEIRGGRHIERVGPTSLFIKEEGEVPYGMLVWSTGLAPNP 317
Query: 191 LVKSLDL------PKSPGGRIGIDEWLRV--PS---VQDVFAVGDCSGYLESTGKTVLPA 239
L S+ PK+ G I +D L V P + +V+A+GD + + +G+ LPA
Sbjct: 318 LTASISAETLLKDPKTHG--IVVDNALNVIEPDGKLLSNVYAIGDTA--VIQSGR--LPA 371
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
AQVA +Q Y+ LN K G A F + + G +A +G ++A+ D
Sbjct: 372 TAQVASQQAGYVAKKLNAEVKGKTGPAA----------FRFVNRGMLAYLGDWRAIYDRG 421
Query: 300 QNKESKGL--SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+SKGL +G +WL+WRSAY T +S RN+ + V W ++ GRDIS+I
Sbjct: 422 YGGQSKGLFRKESGRFAWLLWRSAYFTMTLSTRNKILIPVYWFLNWITGRDISKI 476
>gi|323450850|gb|EGB06729.1| hypothetical protein AURANDRAFT_10731, partial [Aureococcus
anophagefferens]
Length = 473
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 197/377 (52%), Gaps = 45/377 (11%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F++ YD +V A GA +TFG+ GV+E+ FL+++ A +R+ L +++P +S+
Sbjct: 97 EFEVPYDVVVCATGATTNTFGVPGVREHCLFLKQIADADALRQGLGNCFERANLPTLSDA 156
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E+ R L VVG GPTGVEF GEL DF+ + Y + VTL+EA +L +FD
Sbjct: 157 ERRRALSFAVVGAGPTGVEFCGELLDFLESEALAFYPKLVGEASVTLLEATTTVLGAFDA 216
Query: 138 RLRHYATTQLSKS-------GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189
LR A +L KS GV + G V +V+ ++L +PYGL VW+TG GP+
Sbjct: 217 SLRDVAVGELEKSRNGGGIKGVDIRLGAAVTEVNGTHVLLGGDDPLPYGLCVWATGNGPT 276
Query: 190 TLV----KSLDLPKSPG-------GRIGIDEWLRVPSVQ--DVFAVGDCSGYL---ESTG 233
+V K+L + G GR G+D WLRV +VFA+GDC+ + +
Sbjct: 277 RVVTDTLKALGADGAQGDAQAWARGRFGVDAWLRVLGAPPGEVFAIGDCAADVVDFAAET 336
Query: 234 KTVLPALAQVAERQGKYLFSLLN-----RIGKAGGGRANSAKDME--------------- 273
K LPA AQVA +QG+YL LL + K R A D +
Sbjct: 337 KATLPATAQVAAQQGEYLARLLKLGPDYDLAKPEPSRPRGAADDDRRLDELFCDERNGHL 396
Query: 274 LGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 333
+ PF + +LG +A +G KAL + G+ AG ++ +WRS Y+++ VS RNR
Sbjct: 397 VARPFQFLNLGILAYVGDGKALAQVALGDGDLGVKAAGRAAFGLWRSVYISKQVSPRNRL 456
Query: 334 YVAVNWATTFVFGRDIS 350
V +W T VFGRDI+
Sbjct: 457 LVIGDWLRTRVFGRDIT 473
>gi|350631532|gb|EHA19903.1| hypothetical protein ASPNIDRAFT_178085 [Aspergillus niger ATCC
1015]
Length = 494
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 192/347 (55%), Gaps = 33/347 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K+S+D LV+ +GAE +TFGI GVKE+A FL+E+ A+EIR++++ N + ++ E
Sbjct: 162 KVSFDLLVVGIGAENATFGIPGVKEHACFLKELEDAREIRQRVI-NCIEQASQEQNDTEL 220
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
R LH VVVGGGPTG+E + E+ DF DV++ + + D + VTL+EA +L F L
Sbjct: 221 ERKLHMVVVGGGPTGIETAAEMRDFFRNDVQRLFPKLSDKVKVTLVEALPSVLQMFPKGL 280
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTE---------VPYGLLVWSTGVGPST 190
Y ++ + +++ ++ I + T+ VPYG+LVW+ G
Sbjct: 281 IEYTESKFLAEQIDILKNTKVKRATETHIEAEVTQPDGSIKTEMVPYGVLVWAAGNAVRP 340
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP+ R G +DE+LRV Q V+A+GDC+ T A QVA +
Sbjct: 341 VVRDLMDQLPEQASSRRGLLVDEYLRVKGTQGVWALGDCTA-------TRYSATGQVAHQ 393
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDM---ELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303
+G YL LN AN+ +DM +L PF Y H GS+A +G A+ DL +
Sbjct: 394 EGAYLAQFLN------NADANAGEDMARSQLPPPFEYTHQGSLAYVGDGCAIADL--SVF 445
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
K + AG L+ ++WR AY+ +S RN++++A +W +FGR +S
Sbjct: 446 GKNMPFAGALTHILWRIAYIKMCISSRNQYFIAGDWLGPAIFGRSMS 492
>gi|213408999|ref|XP_002175270.1| external NADH-ubiquinone oxidoreductase [Schizosaccharomyces
japonicus yFS275]
gi|212003317|gb|EEB08977.1| external NADH-ubiquinone oxidoreductase [Schizosaccharomyces
japonicus yFS275]
Length = 573
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 196/367 (53%), Gaps = 43/367 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM-LSDVPGISEEEK 80
I YD LV A+GAE TFGI GVK+ FL+E A++I+ K++ L L +S+++
Sbjct: 214 IHYDYLVTAVGAENQTFGIEGVKKYGHFLKEAGDAEKIKLKIVEILQELRFNKALSKDDV 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRL 139
RL H VVVGGGPTG EF+ E+ DFI D+++ Y V ++HV+LIEA+ IL+ F L
Sbjct: 274 DRLSHIVVVGGGPTGAEFAAEMQDFIDEDIQECYPDVHPHLHVSLIEASPNILAMFTKSL 333
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLIL--------NDGTEVPYGLLVWSTGVG--P 188
Y K ++ + + +VKDV L + +++PYGLLVW+ G+ P
Sbjct: 334 IDYTRALFKKMHIKVMTKAVVKDVSKDSLAVEFVNAAGGKSISQIPYGLLVWAAGIKARP 393
Query: 189 STLVKSLDLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
T+ +P+ G R G +DE+L V + DV+A+GDC+ + L A AQVA +
Sbjct: 394 ITMQMISTVPEQKGARKGLLVDEYLAVKGMSDVYAIGDCAF-------SGLAATAQVAHQ 446
Query: 247 QGKYLFSLLNRIGKAGGGRAN-----------------SAKDMEL----GDPFVYRHLGS 285
QG+ L LN + K + +A + EL PF YRH G+
Sbjct: 447 QGEALAINLNVLAKQDSLQRELESLHRISHSEKVDDRIAAIENELLHMSVKPFAYRHQGA 506
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG KA+ ++ K + ++G L++ WR YL ++S + R V NW TT +F
Sbjct: 507 LAYIGDDKAVAEMHLPFMKKTIPISGTLTYYFWRMVYLFELISTKTRVSVLFNWLTTRLF 566
Query: 346 GRDISRI 352
GR ++ +
Sbjct: 567 GRSLTNL 573
>gi|299472684|emb|CBN78336.1| NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus]
Length = 638
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 196/364 (53%), Gaps = 35/364 (9%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
++SYDKLV A+G + TFG+ GV+EN L+E + A+++R ++ L + +PG+++EE
Sbjct: 279 MELSYDKLVYAVGTKTGTFGVPGVRENCYMLKEANDARQLRAAIVNVLEEACLPGVTDEE 338
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 139
K +LL VV+G GPTGVEF+GEL+D I DV + + + I++T++ + ++L F++ L
Sbjct: 339 KRKLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELVGLINLTVVSSGKVLPMFEEVL 398
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL--- 195
+ L G+ ++ G +V ++++L +G +PYGL W+ G L +SL
Sbjct: 399 QDRGLNLLQSQGIEILLGSAASEVTKEEVVLKNGKRIPYGLCFWAGGTEARPLTQSLIET 458
Query: 196 ------DLPKSPGGRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
D S G+I +D ++R + A+GD S S +P QVA ++G
Sbjct: 459 IGPEQTDASGSKRGQITVDGYMRALGTNGTILALGDAS----SIQGVKMPTTGQVAAQEG 514
Query: 249 KYLFSLLNR-------IGKAGGGRANS-AKDMEL------------GDPFVYRHLGSMAT 288
Y+ LLNR G NS A ME PF + +LG +A
Sbjct: 515 AYVARLLNRGYDTSVEAAPTMTGYDNSTAGQMEKAVDFFRLRGRLSASPFHFINLGVLAY 574
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG +A+ +++ K++ L AG + +WRS Y+ + VS RNR VAV+W FGRD
Sbjct: 575 IGMGQAVAEVKVGKDTPVLDAAGKAGFFLWRSTYVVKQVSPRNRINVAVDWLKVRFFGRD 634
Query: 349 ISRI 352
I+R+
Sbjct: 635 ITRL 638
>gi|310793149|gb|EFQ28610.1| hypothetical protein GLRG_03754 [Glomerella graminicola M1.001]
Length = 516
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 199/373 (53%), Gaps = 63/373 (16%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YDKLVI++GA + TFGI GVKE A FLR++ A+ IR ++L +D P ++E++
Sbjct: 165 VPYDKLVISVGAYSQTFGIEGVKEYANFLRDIGDARSIRLRVLQCFEKADWPTTTDEQRR 224
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLR 140
++LH VVGGGPTG+EF+ EL D I D+ + Y H+ +++ +T+ + A ++L F+ +L
Sbjct: 225 KMLHFAVVGGGPTGIEFAAELHDLIHDDLSKLYPHLMEFVSITIYDIAPKVLPMFEQQLA 284
Query: 141 HYATTQLSKSGVRL-----VRGIVKDVDSQ----KLILND--GTEVPYGLLVWSTGVGPS 189
YA + G+++ ++ I D D KL + + EV GL+VWSTG+ +
Sbjct: 285 SYAEDLFRRQGIKVKTQHHLQRIRSDEDDTYNTLKLKIKEYGDEEVGAGLVVWSTGLMQN 344
Query: 190 TLV-----KSLDLPKSP----------------GGRIGIDEWLRV---------PSVQDV 219
L+ K L P S G I D LRV + DV
Sbjct: 345 PLIQKILKKELRNPASAVEGKRSEIVKVLKAERSGGIITDSHLRVRLDDPDNEKAVLPDV 404
Query: 220 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV 279
+++GDCS + TG LPA AQVA +Q YL +LNR G + PF
Sbjct: 405 YSLGDCS--VLETG--TLPATAQVASQQAVYLAKMLNRAADDRGSK-----------PFK 449
Query: 280 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+R+LG+MA +G ++A+ +S L G +W++WR AYLT+ +S RN+ V W
Sbjct: 450 FRNLGTMAYLGSWRAI------HQSSADELKGRAAWILWRCAYLTKSMSIRNKILVPFYW 503
Query: 340 ATTFVFGRDISRI 352
T+VFGR ISR
Sbjct: 504 FITWVFGRGISRF 516
>gi|398395235|ref|XP_003851076.1| hypothetical protein MYCGRDRAFT_74173 [Zymoseptoria tritici IPO323]
gi|339470955|gb|EGP86052.1| hypothetical protein MYCGRDRAFT_74173 [Zymoseptoria tritici IPO323]
Length = 491
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 191/363 (52%), Gaps = 57/363 (15%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLV+A+G TF GVKE A FL++V HA+ IR +LL ++ +P S E
Sbjct: 156 FDLPYDKLVVAVGCYTQTFNTKGVKEYAYFLKDVAHARRIRNRLLSCFEIAALPTTSVEL 215
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ ++L+ VVVGGGPTG+E+S EL D I D+ + Y + ++ +T+ + A ++L FD++
Sbjct: 216 RDQILNFVVVGGGPTGIEWSAELHDLIHEDMSRLYPELVKHVKITVYDVAPKVLGMFDEK 275
Query: 139 LRHYATTQLSKSGV---------RLVRGIVKDVDSQK------LILNDGTEVPYGLLVWS 183
L YA ++G+ L G V + DS L L + EV G+ VWS
Sbjct: 276 LSKYAMKTFQRNGISIKTNHHVEELRPGTVANPDSTDAFTCYTLKLKEEGEVGVGMCVWS 335
Query: 184 TGVGPSTLVKSLDLPKSPGGRIGIDE-----------WLRVPS---VQDVFAVGDCSGYL 229
TG+ + V+S + RI DE ++ P + DV+A+GDC+ L
Sbjct: 336 TGLMMNPFVES-----ALKDRIKQDERSHAVLTNANLQIKGPDDTPIPDVYAIGDCA-VL 389
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATI 289
E T PA AQVA ++ +L N+ D E F Y+ LG MA I
Sbjct: 390 EGTA---YPATAQVASQKAGWLAKRFNK------------GDFERQKGFQYKDLGVMAYI 434
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G A++ ++ G ++GFL+W +WR YLT+ +SWRNR + + W+ FVFGRDI
Sbjct: 435 GNRNAIL------QTGGGKISGFLAWCIWRGVYLTKSMSWRNRILIPIYWSINFVFGRDI 488
Query: 350 SRI 352
SR
Sbjct: 489 SRF 491
>gi|299746144|ref|XP_001837766.2| ndb1 (nad(p)h dehydrogenase b1) [Coprinopsis cinerea okayama7#130]
gi|298406922|gb|EAU84110.2| ndb1 (nad(p)h dehydrogenase b1) [Coprinopsis cinerea okayama7#130]
Length = 487
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 193/354 (54%), Gaps = 40/354 (11%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLVIA+GA + TF + GVKENA FL++V A+ IR ++L ++ P +S+ E
Sbjct: 153 FTVGYDKLVIAVGAYSQTFNVPGVKENAHFLKDVRDARRIRSRILECFEQANQPTMSDIE 212
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIE-ANEILSSFDD 137
+ LL+ +VGGGPTGVEF+ EL D + D+ + Y + +TL + A IL SFD
Sbjct: 213 RINLLNFCIVGGGPTGVEFAAELHDLLHTDIARHYPRTLVRLAKITLYDVAPNILGSFDQ 272
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL- 195
LR Y LS+ GV L V+ V+ K+I+ + EVP+GLLVWSTG+ P+ L+K++
Sbjct: 273 SLRKYTEKTLSREGVNILTSHHVERVEPGKMIVKEKGEVPFGLLVWSTGLAPNPLIKAIT 332
Query: 196 DLPKSPG-GRIGIDEWLRV------PSVQDVFAVGDCSGYLESTGKTVLPALAQ------ 242
+ K P + ++ L V P+ DV+ +GD +++ LPA AQ
Sbjct: 333 SVQKDPKTSSLITNDHLNVIMENGEPN-PDVWTIGDAGTVVDAP----LPATAQGISLGA 387
Query: 243 ----VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
VA ++ KY+ LN++ AKD E PF + + GS+A K
Sbjct: 388 WRSLVASQKAKYMVKKLNKL----------AKDREHNVPFTFHNQGSLAKAIYEKPSGPA 437
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ KE L G +WL+WRSAY T +SWRN+F + +FGRD++R
Sbjct: 438 AETKE----GLQGRSAWLLWRSAYFTMTLSWRNKFLNFTDATPPGIFGRDLTRF 487
>gi|452980483|gb|EME80244.1| hypothetical protein MYCFIDRAFT_189859 [Pseudocercospora fijiensis
CIRAD86]
Length = 472
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 197/364 (54%), Gaps = 56/364 (15%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKL+I++G A TF GV+ENA FL++V A+ IR +LL ++ +P S E
Sbjct: 134 FEMGYDKLIISVGCYAQTFNTPGVRENAYFLKDVGDARRIRNRLLSCFEIAALPTTSVET 193
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K LL+ VVGGGPTG+E+S EL D + D+++ Y + Y+ +T+ + A +L FD R
Sbjct: 194 KKMLLNFAVVGGGPTGIEWSAELYDMVYEDIKRLYPELVQYVKITVYDVAPTVLGMFDKR 253
Query: 139 LRHYATTQLSKSGVRL-----VRGIVKDVDSQK--------------LILNDGTEVPYGL 179
L YA + G+ + ++ + DV K L + + E+ G+
Sbjct: 254 LSDYAMKTFGRQGIDIKTSHHIQELRLDVPEGKQPPPGVRDGGSLYTLKIEEEGEIGCGM 313
Query: 180 LVWSTGVGPSTLVKSL------DLPKSPGGRIGIDEWLRVPS-----VQDVFAVGDCSGY 228
+VWSTG+ + V+S KS G I +E L+V + DV+A+GDC+
Sbjct: 314 VVWSTGLMMNPFVESALKGKVKQHEKSHG--ILTNERLQVKDATDKPIPDVYALGDCA-I 370
Query: 229 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMAT 288
LE T PA AQVA ++ +L LN+ D+E + F YR+LG MA
Sbjct: 371 LEGTS---YPATAQVASQKAYWLAKRLNK------------GDIE-QNKFNYRNLGVMAY 414
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA++ +S G ++G ++W++WR AYLT+ VSWRNR + + W ++FGRD
Sbjct: 415 IGNRKAIL------QSGGGDISGRIAWMIWRGAYLTKTVSWRNRILIPIYWTINWIFGRD 468
Query: 349 ISRI 352
ISR
Sbjct: 469 ISRF 472
>gi|330799418|ref|XP_003287742.1| hypothetical protein DICPUDRAFT_97816 [Dictyostelium purpureum]
gi|325082251|gb|EGC35739.1| hypothetical protein DICPUDRAFT_97816 [Dictyostelium purpureum]
Length = 453
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 203/337 (60%), Gaps = 23/337 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + +D+LVI +G ++FGI GV++ A +L+E+ HA+ IR+K++ + +P +S +E
Sbjct: 136 FVMDFDELVIGVGGINNSFGIPGVEKYANYLKELAHARTIRKKIIDCFENASLPDVSVKE 195
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDD 137
+ RLL VVVGGGPTGVEF+ EL+DF + D+++ + V + + V L+EA+ +IL++FD+
Sbjct: 196 RERLLTFVVVGGGPTGVEFTAELNDFFVEDIQRLFPLVNPNEVKVILLEASGKILTAFDE 255
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L SG+ + VK+V + ++L DGT++PYGLLVWSTG+G + L+K+
Sbjct: 256 SLVKKTLKVFRSSGIDVKTHSPVKEVFDEYVLLADGTKIPYGLLVWSTGIGANPLIKNSP 315
Query: 197 LPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
K P GRI +D+ LRV + +++ GDCS +E P AQVA ++G YL
Sbjct: 316 FEKDPHTGRILVDKHLRVKNFNNIYCFGDCS-IVEGEN---YPLTAQVASQEGVYLAKEF 371
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N R + + E F ++ +G +A IG +L ++ L+GF+++
Sbjct: 372 N-----NKEREHPRQPQE----FKFKFMGLLAYIGNKNSLF------QTPLFDLSGFIAF 416
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L WRSAYLTR+ SWR + V ++W T VFGRDIS
Sbjct: 417 LTWRSAYLTRLGSWRAKMMVPMDWLRTIVFGRDISNF 453
>gi|46125771|ref|XP_387439.1| hypothetical protein FG07263.1 [Gibberella zeae PH-1]
Length = 476
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 199/364 (54%), Gaps = 49/364 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+I YDKLV+A+G + TFG+ GVKE+A FLR+ A+ +R ++L + +P +
Sbjct: 132 EFQIPYDKLVVAVGCYSQTFGVEGVKEHACFLRDATDARTVRLRVLQKFEQAALPSTNTA 191
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ RLLH VVGGGPTG+EF+ EL D I D+ + Y + ++ +T+ + A ++L FD
Sbjct: 192 ERKRLLHFAVVGGGPTGIEFAAELHDLIHEDLSKLYPDLMPHVAITIYDIAPKVLPMFDQ 251
Query: 138 RLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVWSTGVGPSTL 191
L YAT + G+R+ ++GI + D + I + EV G++VWSTG+ + L
Sbjct: 252 NLAAYATNIFKREGIRIKTEHHLQGIRRQGDVLLMRIKEEPEEVAAGVVVWSTGLMQNPL 311
Query: 192 V-KSLDLPKSPGGRI---------GIDEWLRV-------------PSVQDVFAVGDCSGY 228
V K++ G+I +D LRV S+ DV+A+GDC+
Sbjct: 312 VGKTVGREVEGLGKIAKNDKTGGFAVDSHLRVQVESRDLNGKEITKSLPDVYAIGDCA-- 369
Query: 229 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMAT 288
+ LPA AQVA +Q YL N G + G + PF +R+ G+MA
Sbjct: 370 --NIEGQALPATAQVASQQATYLGKRFNS-GISSQGPPTA--------PFHFRNWGTMAY 418
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G ++A + QN + L G +W++WR+AYLT+ +S++N+ + W T++FGRD
Sbjct: 419 LGGWRA---IHQNGADE---LKGRAAWILWRTAYLTKSMSFKNKLMIPYYWLITWIFGRD 472
Query: 349 ISRI 352
ISR
Sbjct: 473 ISRF 476
>gi|397643426|gb|EJK75857.1| hypothetical protein THAOC_02409 [Thalassiosira oceanica]
Length = 604
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 214/405 (52%), Gaps = 61/405 (15%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
+ C ++ E + E F ++YD+L+ ++GA+ +TFG GV+E +L++V AQ+I+
Sbjct: 202 ISCISIVCEGNSCETEMFDVNYDRLLFSVGAQTTTFGTPGVEEYCNYLKQVGDAQQIKNA 261
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
++ + +P +++E+K + L V+VG GPTG+EF+ EL DFI D R+ Y + ++
Sbjct: 262 IVNCFESAGLPNLTDEDKQKELTFVIVGAGPTGIEFAAELLDFIEEDGRRYYKDLLPFVR 321
Query: 123 VTLIE-ANEILSSFDDRLRHYATTQLSK----SGVR-------LVRGIVKDVDSQKLILN 170
+ ++E A IL F+D ++ A +L++ GV+ L+ +V +V + +
Sbjct: 322 IKIVEAAPSILRPFEDGMKDEAIRKLTRKIEIEGVQTLQPLEILLNKLVSEVSANYVYFK 381
Query: 171 DGTEVPYGLLVWSTGVGP----STLVKSLDLPKSPG------GRIGIDEWLRVPSVQ-DV 219
DG ++PYG+ +W+ G+GP +++V+SLD + GR+G+D WLRV + V
Sbjct: 382 DGEKIPYGMALWAAGIGPLPITTSMVESLDDTEQKEAQDFARGRLGVDPWLRVIGGEGKV 441
Query: 220 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR----IGKAGG----------GR 265
FA+GDCS + +LPA AQVA +QG++L LL++ K GG G+
Sbjct: 442 FALGDCSCV---SSTPMLPATAQVASQQGEFLGKLLSKDYCVDAKTGGVIIPPMMLDEGQ 498
Query: 266 ANS---------AKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG---------- 306
+ S + + PF Y LG +A G AL L Q KG
Sbjct: 499 SRSLSERIASFATGEKNIAAPFQYLDLGILAYTGSGSALAQL-QVAPGKGDPSSETWNPV 557
Query: 307 -LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
L + G L + +WRS YL + S +N V ++W +FGRDIS
Sbjct: 558 RLQIKGALGFGLWRSIYLWKQTSPKNVVLVTLDWLKVKLFGRDIS 602
>gi|429856559|gb|ELA31464.1| pyridine nucleotide-disulfide [Colletotrichum gloeosporioides Nara
gc5]
Length = 472
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 197/366 (53%), Gaps = 56/366 (15%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YDKLVI++GA + TFGI GVKE A FLR++ A+ IR K+L + P ++ ++
Sbjct: 128 VPYDKLVISVGAYSQTFGIEGVKEYANFLRDIGDARSIRLKVLQLFEKASWPTATDAQRR 187
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLR 140
LLH VVGGGPTG+EF+ EL D I D+ + Y H+ + + +T+ + A ++L FD +L
Sbjct: 188 DLLHFAVVGGGPTGIEFAAELHDLIHDDLSKIYPHLMELVSITIYDIAPKVLPMFDQQLA 247
Query: 141 HYATTQLSKSGV------RLVRGIVKDVDSQKLILND--GTEVPYGLLVWSTGVGPSTLV 192
YAT Q + G+ L R D +L + + EV G+ VWSTG+ + L+
Sbjct: 248 TYATEQFRRQGISVKTEHHLQRVRPDDNGGLRLKIKEYGDEEVGAGICVWSTGLMQNPLI 307
Query: 193 KSLDLP--KSP---------------GGRIGIDEWLRV----PS-----VQDVFAVGDCS 226
++L +SP G I D LRV P + DV+A+GDCS
Sbjct: 308 QTLVAKELRSPTEKEGETVTIKKAERSGGIITDPMLRVRLNDPENENALLPDVYAMGDCS 367
Query: 227 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM 286
LE+ LPA AQVA +Q KYL LN RA S K+ PF +R+ G+M
Sbjct: 368 -ILEN---QTLPATAQVASQQAKYLAKTLN--------RATSGKEPA---PFSFRNWGAM 412
Query: 287 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 346
+G ++A+ +S L G +W++WR+AYLT+ +S +N+ V W T+VFG
Sbjct: 413 TYLGSWRAI------HQSSADELKGRAAWILWRTAYLTKSMSIKNKVLVPWYWFITWVFG 466
Query: 347 RDISRI 352
RDISR
Sbjct: 467 RDISRF 472
>gi|346318211|gb|EGX87815.1| alternative NADH-dehydrogenase [Cordyceps militaris CM01]
Length = 581
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 207/374 (55%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+E++ FL+E+ AQ IR+K++ + + + G SEEE
Sbjct: 218 EIPYDMLVVGVGAENATFGIPGVREHSCFLKEIGDAQRIRKKIMDCVETAALRGQSEEEM 277
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
+RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L SF +L
Sbjct: 278 NRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPGISPRFKVTLIEALPNVLPSFSKQL 337
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 190
Y L + + +V+ + ++ ++ DGT ++PYGLLVW+TG
Sbjct: 338 IDYTENTLREEKIDIMTKTMVKNVTENTVEAEISKPDGTKERVQIPYGLLVWATGNAVRP 397
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK + +P R G ++E+L V +DV+AVGDC +GY + AQVA
Sbjct: 398 IVKDMMSRIPAQKDSRRGLAVNEYLVVQGARDVWAVGDCAVAGYAPT---------AQVA 448
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + K G A+ A+++EL + P
Sbjct: 449 SQEGSFLARLFNNMAKTESLEGRIHDLSSKMNLKAGNAADDAREIELLEKQLRRIKDVKP 508
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V +
Sbjct: 509 FRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFSTRNRVLVIL 566
Query: 338 NWATTFVFGRDISR 351
+W + FGRDISR
Sbjct: 567 DWLKSKAFGRDISR 580
>gi|426193091|gb|EKV43025.1| NDE2 mitochondrial external NADH dehydrogenase [Agaricus bisporus
var. bisporus H97]
Length = 581
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 194/369 (52%), Gaps = 48/369 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TF I GVKE+A F++E++ A+ + + + L + PG +E
Sbjct: 212 IPYDYLVYAVGAETQTFNIPGVKEHACFMKELNDAERFQNEFIDCLETAGFPGQDPQEIE 271
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH +VVGGGPTGVE SGEL DF+ D++ Y + + +TL+EA +L +F +L
Sbjct: 272 RLLHMIVVGGGPTGVELSGELHDFLEDDLKSWYPELAGKVRITLVEALPSVLPTFSKQLI 331
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPSTLVKSL 195
Y + +S + L + +VK++ + +IL EVP GL+VW+ G + + L
Sbjct: 332 DYTQSTFKESKIEVLTKTMVKEIKERSVILQMPDKSIQEVPCGLVVWAGGNKGRKVTQDL 391
Query: 196 --DLPKSPGGRIGI--DEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
P+ R GI D++LR+ +D +FA+GDC+ T AQVA +QG Y
Sbjct: 392 MAKFPEVQTNRRGIVVDDFLRMTGAEDSIFAIGDCTS-------TAYAPTAQVASQQGSY 444
Query: 251 LFSLLNRIGK-------------------AGGGRANSAKDMELGD---------PFVYRH 282
L L+++ K + + +D+E+ PF Y H
Sbjct: 445 LARHLHQMAKHDELQTKLSRLEALAATVVGEEEKKATLRDVEMTKKQLAKIKYRPFDYSH 504
Query: 283 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 342
GS+A IG KA+ DL + ++ G +++ WRSAYL+ + S RNR VA +W
Sbjct: 505 QGSLAYIGSEKAVADL--PFMNGNVATGGVATYMFWRSAYLSTLFSLRNRTLVATDWIKV 562
Query: 343 FVFGRDISR 351
+FGRD++R
Sbjct: 563 KLFGRDVAR 571
>gi|345571042|gb|EGX53857.1| hypothetical protein AOL_s00004g516 [Arthrobotrys oligospora ATCC
24927]
Length = 617
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 190/383 (49%), Gaps = 59/383 (15%)
Query: 21 KISYDKLVIALGAEASTFG---------IHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
++ +D LV+ +GAE +TFG I GVKENA FL+E+ AQ+IR+K++ + +
Sbjct: 241 EVPFDYLVVGVGAENATFGKFLMLCLFGIPGVKENACFLKEIGDAQQIRKKVMDCIETAT 300
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 130
+EEEK RLLH VVVGGGPTG+EF+ EL DF D+R+ + D VTL+EA
Sbjct: 301 FKDQTEEEKDRLLHMVVVGGGPTGIEFAAELQDFFEEDLRKWVPDIADRFKVTLVEALPN 360
Query: 131 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTEVP----YGLLV 181
+L F L Y + + + +VK V + + + DG++V YGLLV
Sbjct: 361 VLPMFSKSLIDYTEKTFKDENISVRTKTMVKKVTDKNIEVEATQADGSKVKESINYGLLV 420
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG +V+ L LP R G ++++L V ++A+GDCS T
Sbjct: 421 WATGNAVRGVVRDLMTQLPAQKNSRRGLAVNDYLVVDGTDGIWALGDCSA-------TKY 473
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRAN----------SAKDMELG------------ 275
AQVA +QG +L L N + K SA D E
Sbjct: 474 APTAQVAAQQGNFLARLFNSMAKTQAVEEELRSLDARLQASADDAEKALLNAEINAKGRS 533
Query: 276 -------DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 328
PF Y H GS+A IG +A+ DL + + G L++L WRSAY++ V S
Sbjct: 534 LSKVKQLSPFQYSHQGSLAYIGADRAVADLNWFGGAISSATGGELTYLFWRSAYVSMVFS 593
Query: 329 WRNRFYVAVNWATTFVFGRDISR 351
RNR V +W T FGRD+SR
Sbjct: 594 LRNRILVLTDWLKTKAFGRDVSR 616
>gi|219116586|ref|XP_002179088.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409855|gb|EEC49786.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 441
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 209/383 (54%), Gaps = 55/383 (14%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENAT------FLREVHH 55
++ CE++ +EL F++ YDKLVIA+G + +TFGI +K+ A+ FL+ + H
Sbjct: 80 RILCESIHNEL-------FEVEYDKLVIAVGVKTNTFGIESIKQAASAHDDVFFLKHLAH 132
Query: 56 AQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS 115
A+ IR ++ + + +P +++ E+ RLL +VVGGGPT EF+ EL DFI +DV + Y
Sbjct: 133 ARAIRTNIIDSFEQAAIPTVTDAERRRLLSFLVVGGGPTSCEFTAELHDFIKKDVTRLYR 192
Query: 116 HVKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSKS--GVRLVRGIVKDVD--------- 163
+ ++ +T++EA +L FD L+ YA K VRL +V D
Sbjct: 193 ELLPHVSITIVEAGPALLGPFDKALQDYAQGLFKKRDIDVRLGTAVVGVEDFEGPGYRFP 252
Query: 164 SQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL--DLPKSP-GGRIGIDEWLRVPSVQ-DV 219
+++ + +DGT+ +G +VWS G+ P T + L ++ + P RI +DE+LRV + +
Sbjct: 253 AKRALFSDGTKHEFGTMVWSAGLAPRTFTEELGDNIARHPRTHRILVDEFLRVKGHEGSI 312
Query: 220 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV 279
+A+GD + + TG+ + P LAQVA +QG YL G+ + K E PF
Sbjct: 313 WAIGDAA--INETGEPI-PQLAQVARQQGIYL------------GKVFNGKYREDEKPFQ 357
Query: 280 YRHLGSMATIGRYKALVD------LRQ-NKES----KGLSLAGFLSWLVWRSAYLTRVVS 328
+ LGSMA +G K + D LR N +S +L G L+ L+WR AY R S
Sbjct: 358 FFSLGSMAFMGESKGIYDGSTAGPLRDPNNKSVHHWTPPALRGILAVLLWRFAYWGRQTS 417
Query: 329 WRNRFYVAVNWATTFVFGRDISR 351
N+ + ++W ++FGRDISR
Sbjct: 418 VANKIMIPIHWLKAYIFGRDISR 440
>gi|344301254|gb|EGW31566.1| hypothetical protein SPAPADRAFT_140814 [Spathaspora passalidarum
NRRL Y-27907]
Length = 554
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 203/359 (56%), Gaps = 37/359 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV EN+TFL+EV A I+++L+ + +++ ++S
Sbjct: 203 LNYDYLVVGVGAQPSTFGIPGVAENSTFLKEVSDAVAIKKRLMDVIEAANILPRGHPDRS 262
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VV GGGPTGVE +GE+ D+I +D+++ V D + VTL+EA +L+SF L
Sbjct: 263 RLLHVVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELKVTLVEALPNVLNSFSKPLV 322
Query: 141 HYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGP--- 188
Y ++ + L+ ++K V + L DG+ E+PYG+L+W+TG P
Sbjct: 323 EYTKQVFKETNINLLTNTMIKKVSEKSLTATEKKADGSSETYEIPYGMLIWATGNAPRDF 382
Query: 189 -STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L+ +D K+ + +DE +++ +VFA+GDC+ T P AQVA ++
Sbjct: 383 TRDLISKVDEQKNARRGLLVDERMKLDGTDNVFALGDCTF-------TKYPPTAQVAFQE 435
Query: 248 GKYL---FSLLNRIGKAGGGRANSAKD-----------MELGDP-FVYRHLGSMATIGRY 292
G++L F+ L+++ ++ + +E P F+Y + GS+A IG
Sbjct: 436 GQFLADYFAKLHQVESLKHSVTTASPEQTDKLTKKLARLENKLPHFIYNYQGSLAYIGSE 495
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KA+ DL S +S G L++L WRSAY+ +S +N+ V+V+W ++FGRD S+
Sbjct: 496 KAVADLVWGDWS-NISSGGGLTFLFWRSAYIYMCLSVKNQVLVSVDWLKVYLFGRDFSK 553
>gi|71005786|ref|XP_757559.1| hypothetical protein UM01412.1 [Ustilago maydis 521]
gi|46096513|gb|EAK81746.1| hypothetical protein UM01412.1 [Ustilago maydis 521]
Length = 512
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 201/384 (52%), Gaps = 66/384 (17%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP------ 73
+ + YD LVI +G+ +TFG GVKENA FL++V A+ IR ++L ++
Sbjct: 144 YSLQYDYLVIGVGSYNATFGTKGVKENALFLKDVSDARAIRWRILGLFESANAKQRQYTH 203
Query: 74 ----GISEEEKS---RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI 126
IS E++ RLL VVVGGGPTG EF+ EL D I ++ + Y +V Y V L+
Sbjct: 204 QGQVAISAEQEHQLRRLLSFVVVGGGPTGSEFAAELHDLINDELSRLYPNVCAYATVRLL 263
Query: 127 EA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLL 180
+A + ILSSFD RL YA + ++ G+++ + ++ V+ ++L+ + G++
Sbjct: 264 DAGSTILSSFDARLAEYAINKFARDGIQVQLNAKIRRVERDAVVLDSAGGHQERIAAGMV 323
Query: 181 VWSTGVGPSTLVK------------------SLDL---PKSPGGRIGI------DEWLRV 213
+WSTG+ S L++ +L+L P P + D +
Sbjct: 324 IWSTGITTSPLIQAFRGVAKQDRTGKLLTNHTLNLVIHPSHPNPGANVLNPAADDSHMGS 383
Query: 214 PS-----VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANS 268
PS + +VFA+GDCS ++ LPA AQVA +QG YL L N + + S
Sbjct: 384 PSQPPTPLDNVFALGDCSASPDA-----LPATAQVASQQGTYLAHLFNSHLASASPSSRS 438
Query: 269 AKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 328
++ PFV+ GSMA+IG AL+D K+S G L+WL+WRSAY +S
Sbjct: 439 SQP----KPFVFHDKGSMASIGSRSALIDSPVKKDS------GTLAWLLWRSAYTIMAMS 488
Query: 329 WRNRFYVAVNWATTFVFGRDISRI 352
WRNRF V NWA+ +FGRD+ R
Sbjct: 489 WRNRFLVPANWASNLLFGRDVGRF 512
>gi|343427290|emb|CBQ70818.1| related to NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Sporisorium reilianum SRZ2]
Length = 507
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 197/379 (51%), Gaps = 64/379 (16%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---------LNLML 69
K+ + YD LV+++G+ TFG GVKENA FL++V A+ IR ++L N M
Sbjct: 148 KYTMEYDYLVVSVGSYNQTFGTQGVKENALFLKDVSDARAIRWRILGLFEAANARFNAM- 206
Query: 70 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA- 128
D +E+E RLL VVVGGGPTG EF+ EL D I D+ + Y ++ Y + L++A
Sbjct: 207 EDGDKEAEDEVRRLLTFVVVGGGPTGSEFAAELHDLIKADLARLYPKLRAYPSIRLLDAG 266
Query: 129 NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 187
+ ILSSFD L YA + ++ G+ + + ++ V+ ++L + G++VWSTG+
Sbjct: 267 STILSSFDAGLAEYAMNKFARDGISVQLHAKIQRVERDAVVLEGEQRIGAGMVVWSTGIT 326
Query: 188 PSTLVKSLD--LPKSPGGRIGIDEWLRV---------------PS--------------- 215
S L+++ + G++ ++ L V PS
Sbjct: 327 TSPLIEAFRGVGKEDRTGKVLTNDTLNVLVEQGADTVGGSVLNPSAFESSTADKGEKGEL 386
Query: 216 --VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDME 273
+ VFA+GDC+ L T LPA AQVA ++G +L L N + + AK
Sbjct: 387 VPLDSVFALGDCASQL----GTPLPATAQVATQKGTFLAHLFN----THLAQPSPAKP-- 436
Query: 274 LGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 333
PF + + GSMA+IG KAL+D KES G L+W++WRSAY +SWRNRF
Sbjct: 437 --KPFEFANKGSMASIGSGKALIDSPVKKES------GALAWILWRSAYTIMSMSWRNRF 488
Query: 334 YVAVNWATTFVFGRDISRI 352
V NW + VFGRD+ R
Sbjct: 489 LVPANWVSNVVFGRDVGRF 507
>gi|408399651|gb|EKJ78749.1| hypothetical protein FPSE_01117 [Fusarium pseudograminearum CS3096]
Length = 455
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 198/364 (54%), Gaps = 49/364 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+I YDKLV+A+G + TFG+ GVKE+A FLR+ A+ +R ++L + +P +
Sbjct: 111 EFQIPYDKLVVAVGCYSQTFGVEGVKEHACFLRDATDARTVRLRVLQKFEQAALPSTNTA 170
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ RLLH VVGGGPTG+EF+ EL D I D+ + Y + ++ +T+ + A ++L FD
Sbjct: 171 ERKRLLHFAVVGGGPTGIEFAAELHDLIHEDLSKLYPDLMPHVAITIYDIAPKVLPMFDQ 230
Query: 138 RLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVWSTGVGPSTL 191
L YAT + G+ + ++GI + D + I + EV G++VWSTG+ + L
Sbjct: 231 NLAAYATNIFKREGIHIKTEHHLQGIRRQGDVLLMRIKEEPEEVAAGVVVWSTGLMQNPL 290
Query: 192 V-KSLDLPKSPGGRI---------GIDEWLRV-------------PSVQDVFAVGDCSGY 228
V K++ G+I +D LRV S+ DV+A+GDC+
Sbjct: 291 VGKTVGREVEGLGKIAKNDKTGGFAVDSHLRVQVESRDPNGKEITKSLPDVYAIGDCA-- 348
Query: 229 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMAT 288
+ LPA AQVA +Q YL N G + G + PF +R+ G+MA
Sbjct: 349 --NIEGLALPATAQVASQQATYLGKRFNS-GVSSQGPPTA--------PFHFRNWGTMAY 397
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G ++A + QN + L G +W++WR+AYLT+ +S++N+ + W T++FGRD
Sbjct: 398 LGGWRA---IHQNGADE---LKGRAAWILWRTAYLTKSMSFKNKLMIPYYWLITWIFGRD 451
Query: 349 ISRI 352
ISR
Sbjct: 452 ISRF 455
>gi|403215969|emb|CCK70467.1| hypothetical protein KNAG_0E02050 [Kazachstania naganishii CBS
8797]
Length = 565
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 200/371 (53%), Gaps = 55/371 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+ ++YD LVI +G++ +TF I GV E+++FL+E+ AQEIR K++ ++ + + +
Sbjct: 210 EMNLNYDYLVIGVGSQPTTFNIPGVYEHSSFLKEIGDAQEIRLKMMNSIEEAALLSPDDP 269
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E++RLL V+VGGGPTGVEF+ EL D++ +D+ + + I VTL+E ILS FD
Sbjct: 270 ERARLLSFVIVGGGPTGVEFAAELKDYVDQDLAKWMPELSKEIKVTLVEGMPHILSMFDK 329
Query: 138 RLRHYATTQLSKSGVRL-----VRGIV------KDVDSQKLILNDGTEVPYGLLVWSTGV 186
L YA K + L V+ + K+ DS K+ E+ YG+LVW+TG
Sbjct: 330 NLIDYAEKLFKKEQINLKLKTHVQAVTPTKVLGKNADSNKI-----EEISYGVLVWATGN 384
Query: 187 GPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL-- 240
P +VK L LP+ R + I++ L++ + VFA+GDC T P L
Sbjct: 385 APRDVVKDLMNKLPEQNSRRGLLINDKLQLLGAESSVFAIGDC---------TFFPGLFP 435
Query: 241 -AQVAERQGKYLFSLLNRIGK--------------------AGGGRANSAKDMELGDPFV 279
AQVA ++GKYL ++ N++ K + N K +L PF
Sbjct: 436 TAQVAHQEGKYLSTVFNKLHKIDQLEWRVQQQKTQNASTEIINKLQGNIKKLNDLIVPFK 495
Query: 280 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
Y H+GS+A +G+ KA+ D+ ++ AG ++L W+SAYL S+RNR VA++W
Sbjct: 496 YHHMGSLAYVGKDKAIADIPIG--GSNITSAGSFTFLFWKSAYLAMFESFRNRLLVALDW 553
Query: 340 ATTFVFGRDIS 350
F+ GRD S
Sbjct: 554 TKVFITGRDSS 564
>gi|3080393|emb|CAA18713.1| NADH dehydrogenase like protein [Arabidopsis thaliana]
gi|7268946|emb|CAB81256.1| NADH dehydrogenase like protein [Arabidopsis thaliana]
Length = 478
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 193/350 (55%), Gaps = 31/350 (8%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR ++ + + +PG++E+
Sbjct: 144 EFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKASLPGLNEQ 203
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y K+ + +TL+E A+ IL+ FD
Sbjct: 204 ERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPKAKNLVQITLLEAADHILTMFDK 263
Query: 138 RLRHYATTQLSKSG--VRLVRGIVKDVD---SQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
R+ +A + ++ G V+L +VK D S K + + +PYG++VWSTG+G ++
Sbjct: 264 RITEFAEEKFTRDGIDVKLGSMVVKVNDKEISAKTKAGEVSTIPYGMIVWSTGIGTRPVI 323
Query: 193 KSLDLPKSPGG------RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
K D K G + DEWLRV +++A+GDC+ T+ VA +
Sbjct: 324 K--DFMKQIGQVSSQRRALATDEWLRVEGCDNIYALGDCA--------TINQRKVMVAAQ 373
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRYKALVDLRQNK 302
QG YL +R+ + G PF YRHLG A +G + L +
Sbjct: 374 QGTYLAKCFDRMEVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGEQTAAQLPGDW 433
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 434 VSIGHS----SQWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSRI 478
>gi|242215985|ref|XP_002473803.1| predicted protein [Postia placenta Mad-698-R]
gi|220727069|gb|EED81000.1| predicted protein [Postia placenta Mad-698-R]
Length = 463
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 191/347 (55%), Gaps = 30/347 (8%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
++++ YDKLVIA+GA TF I GVKE+A FL+++ A+ IR ++L ++ P I+++
Sbjct: 134 QYELKYDKLVIAVGAYNRTFFIPGVKEHAHFLKDIRDARAIRARILECFEQANQPTITDD 193
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 138
++ +LLH +VGGGPTGVEF+ EL D + +++Q Y + ++L + +
Sbjct: 194 DRRKLLHFCIVGGGPTGVEFAAELHDLLHAEIKQSYPSLARMDKISLYDVAPRILGIRLH 253
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-D 196
R +AT + ++ G+ L + V V+S K+ + + EV +GLLVWSTG+ P+ LV++L +
Sbjct: 254 TRSWATKKFTREGINILTQHHVDRVESGKMYVKEQGEVHFGLLVWSTGLAPNPLVQNLTE 313
Query: 197 LPKSPG-GRIGIDEWLRV------PSVQDVFAVGDCS----GYLESTGKTVLPALAQVAE 245
K P I DE L V DV+A+GD + L +T + LP+ AQ
Sbjct: 314 AEKDPKTASILTDEHLNVLMKDTGAPNPDVWAIGDAAIIKGNPLPATAQGELPSPAQ--- 370
Query: 246 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 305
YL LNR+ +D +PF + + GS+A +G ++A+ D +
Sbjct: 371 ----YLRKKLNRL----------VRDRAAPEPFAFHNAGSLAYLGDWQAVYDRSHAESGP 416
Query: 306 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G ++WL+WRSAY T +S +N+ V W ++FGRD+SR
Sbjct: 417 KTMETGRVAWLLWRSAYFTMTLSLKNKILVPTYWFMNWIFGRDLSRF 463
>gi|346327253|gb|EGX96849.1| pyridine nucleotide-disulfide oxidoreductase, putative [Cordyceps
militaris CM01]
Length = 456
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 193/363 (53%), Gaps = 52/363 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F I+YD LVIA+G + TFG GV ++A FLR+V A+ IR K+L +D+P ++
Sbjct: 117 EFSITYDTLVIAVGCYSQTFGTEGVAQHANFLRDVGDARAIRLKVLTAFEKADLPSATDA 176
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
+++ LLH +VGGGPTG+EF+ EL D + D+ + Y + ++ VT+ + A ++L FD
Sbjct: 177 QRAELLHFAIVGGGPTGIEFAAELHDLVHEDLAKLYPALMRFVRVTVYDIAPKVLPMFDQ 236
Query: 138 RLRHYATTQLSKSGVRL--------VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189
L YA + G+ + +R + +L +D EV GLLVWSTG+ +
Sbjct: 237 ALASYAMDLFRRQGIEVKTEHSLQSIRRTDDGILKLRLKGHDA-EVGAGLLVWSTGLMQN 295
Query: 190 TLVKSLDLPKSPG----------GRIGIDEWLRVPS----------VQDVFAVGDCSGYL 229
LV L PG G I D +RV + + DV+A+GDC+ +
Sbjct: 296 PLVARLLRQDIPGLGRIVEDDRTGGITTDGAMRVLTRPVGGGAPVPLPDVYAIGDCTVQV 355
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATI 289
LPA AQVA +Q +L G R NS G+ F++R+ G+MA +
Sbjct: 356 AHR----LPATAQVASQQATWL-----------GKRINSGNANADGE-FIFRNWGAMAYL 399
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G +A + QN L G+ +W++WR+AYLT+ +SWRN+ + + W T +FGRDI
Sbjct: 400 GSKRA---IHQNGAD---GLRGWPAWILWRTAYLTKSMSWRNKLKIPLQWLITALFGRDI 453
Query: 350 SRI 352
SR
Sbjct: 454 SRF 456
>gi|400599490|gb|EJP67187.1| NADH dehydrogenase [Beauveria bassiana ARSEF 2860]
Length = 584
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 204/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+E++ FL+E+ AQ IR+K++ + + + G SEEE
Sbjct: 221 EIPYDMLVVGVGAENATFGIPGVREHSCFLKEIGDAQRIRKKIMDCVETAALRGQSEEEM 280
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L SF +L
Sbjct: 281 KRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPGISPRFKVTLIEALPNVLPSFSKQL 340
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 190
Y L + + +V+ + ++ ++ DGT ++PYGLLVW+TG
Sbjct: 341 IDYTENTLREEKIDIMTKTMVKNVTENTVEAEISKPDGTKELVKIPYGLLVWATGNAVRP 400
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK + +P R G ++E+L V +DV+AVGDC +GY + AQVA
Sbjct: 401 VVKDMMARIPAQKDSRRGLAVNEYLVVQGARDVWAVGDCAVAGYAPT---------AQVA 451
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + K G A+ A +EL + P
Sbjct: 452 SQEGSFLARLFNNMAKTESLEARIHDLSSKMNLKAGNAADDAHQIELLEKQLRRIKDVKP 511
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V +
Sbjct: 512 FRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFSTRNRVLVIL 569
Query: 338 NWATTFVFGRDISR 351
+W + FGRDISR
Sbjct: 570 DWLKSKAFGRDISR 583
>gi|358058093|dbj|GAA96072.1| hypothetical protein E5Q_02733 [Mixia osmundae IAM 14324]
Length = 484
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 186/344 (54%), Gaps = 30/344 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F SYDKL++A GA + TFGI GVKE FL++V A+ IR ++L + P +++++
Sbjct: 160 FSYSYDKLIVACGAYSQTFGIPGVKEYGHFLKDVTDARAIRSRILECFEQAAQPNVTDDQ 219
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LLH +VG GPTGVEF+ EL D + ++ + Y + ++L + A+ +L +FD
Sbjct: 220 RRALLHFCIVGAGPTGVEFAAELHDLLTAEIVRYYPSIARLARISLYDTADRVLGTFDQE 279
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-- 195
L YA ++ + G++L + V V+ L + + VPYG+LVWSTG+ +TL+ +L
Sbjct: 280 LSEYAMSRFMREGIQLKMNHSVTRVNPNSLEVREEGTVPYGMLVWSTGLAANTLIANLTD 339
Query: 196 -DLPKSPGGR-IGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
++ K P + + L V ++ ++FA+GD + +E PA AQVA ++
Sbjct: 340 QEVKKDPRTHSLLTTDGLEVFDPKGKAMDNIFAIGD-AAVVEGQHH---PATAQVASQKA 395
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
KYL LN I AK+ PFVY+ G MA +G +KAL+ +KG
Sbjct: 396 KYLAKKLNAI----------AKERTFSTPFVYQDRGVMAYVGDWKALISTPGGGSAKGTG 445
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+WL WRS Y + S RN V W ++FGRDISR
Sbjct: 446 -----AWLAWRSVYWSMARSPRNLILVPTYWFVGWLFGRDISRF 484
>gi|384483903|gb|EIE76083.1| hypothetical protein RO3G_00787 [Rhizopus delemar RA 99-880]
Length = 529
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 198/358 (55%), Gaps = 40/358 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I+YD LV+ +GA++ TFGI GV+E FL+EV AQ+IR KL+ + + PG SEEE
Sbjct: 183 IAYDYLVVGVGAQSQTFGIKGVEEYGCFLKEVWDAQKIRTKLMDCIETAAFPGQSEEEIE 242
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE++ EL DF++ D+ Y + I +TL+EA +L +F +L
Sbjct: 243 RLLHMVVVGGGPTGVEYAAELHDFLVDDLTAWYPELAGKIKITLVEAMPNVLPAFSKQLI 302
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKSL 195
Y + + + + + +VK+V +++I+ DG +PYGLLVW+TG LV+ L
Sbjct: 303 DYTESTFKEQHIDIHTKTMVKEVKEKEIIIQGPDGKMDTMPYGLLVWATGNTSRPLVRDL 362
Query: 196 --DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
P++ R G +D+WLR+ +D++A+GDC+ T AQVA +QGKYL
Sbjct: 363 MAQYPEAQNVRRGLVVDDWLRMTGTEDIYALGDCTA-------TKYAPTAQVAAQQGKYL 415
Query: 252 FSLLNRIGKAGGGRA------------------NSAKDMELGDPFVYRHLGSMATIGRYK 293
+ ++ A A+D++ PF Y H GS+ IG K
Sbjct: 416 ARVFAQLHATECHEAALEEVTTDEEKTKIMRKLQKAQDIK---PFQYSHQGSLCYIGSDK 472
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
A+ DL L+ G ++ WRSAY++ + S RNR+ V +W +GRDISR
Sbjct: 473 AIADLPLG--PGNLASGGVATFAFWRSAYISNIFSARNRWLVITDWTKKTFWGRDISR 528
>gi|406864136|gb|EKD17182.1| hypothetical protein MBM_04759 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 500
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 202/394 (51%), Gaps = 82/394 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLVIA+G + TF GV+ENA FL++V A++IR+++L + P SE+
Sbjct: 128 FELDYDKLVIAVGCYSQTFNTAGVRENAFFLKDVSDARKIRKRILECFEAASCPTTSEKL 187
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ +LL+ VVGGGPTGVEF+ EL D D+++ Y + +I +++ + A +IL FD
Sbjct: 188 RDQLLNFAVVGGGPTGVEFAAELFDLCHEDLKKLYPQLIPHIKISIYDVATKILPMFDAS 247
Query: 139 LRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDG----------TEVPYGLLVWS 183
L YA + G+++ ++ + + NDG EV G+ VWS
Sbjct: 248 LAKYAIDLFRRDGIQIKTEHHIQSLRPGLPGSDNPDNDGGCFTLKTKEDGEVGVGMCVWS 307
Query: 184 TGVGPSTLVK-SLD----LP------------KSPG------------GRIGIDEWLRV- 213
TG+ + V+ +LD P +SPG G + +DE RV
Sbjct: 308 TGLMMNPFVQAALDDVHTYPTTSATLAPGTEMESPGTEKWHLKRHPRSGNLMVDERFRVK 367
Query: 214 ---------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
++QDVFA+GD S + KT LPA AQVA ++ K+L
Sbjct: 368 LTSRSSAPTDQNVPEATMQDVFAIGDVS----AMEKTQLPATAQVANQEAKWL------- 416
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
G R N E G F +++LG M +G +KA++ Q + KG+ G ++W++W
Sbjct: 417 ----GKRLNQGTLTE-GAGFNFKNLGVMTYLGNWKAVM---QADDGKGIK--GRMAWIIW 466
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
R AYLT+ VSWRNR + + W ++FGRDISR
Sbjct: 467 RGAYLTQTVSWRNRILIPIYWCINWIFGRDISRF 500
>gi|403418911|emb|CCM05611.1| predicted protein [Fibroporia radiculosa]
Length = 473
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 190/331 (57%), Gaps = 24/331 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
KF + YD+LVI++GA TF + GVKE+ FL+++ A+ IR +++ ++ P I+++
Sbjct: 157 KFTLRYDRLVISVGAYNRTFNVPGVKEHGHFLKDIRDARAIRSRIIECFEQANQPTITDD 216
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
++ +LLH +VGGGPTGVEF+ EL D + +V++ Y + ++L + A IL SFD
Sbjct: 217 DRRKLLHFCIVGGGPTGVEFAAELHDLLHTEVKRHYPSLARLARISLYDVAPHILGSFDV 276
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L+ +AT + ++ G+R L + V+ V++ K+ + + EV +GLLVWSTG+ P+ L++S+
Sbjct: 277 GLQEWATKKFTREGIRILTQHHVERVEAGKMYVKEQGEVYFGLLVWSTGLAPNPLIQSIT 336
Query: 197 LPK--SPGGRIGIDEWLRV------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ + + DE L V DV+AVGD + ++ LPA AQVA ++
Sbjct: 337 EAEKDTRTASLITDEHLNVVMKDTGKPDPDVWAVGDAAIIKDNP----LPATAQVANQKA 392
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+YL LN I A+D PF + + GS+A +G ++A+ D +
Sbjct: 393 RYLRKKLNLI----------ARDKPAIVPFHFHNAGSLAYLGDWQAVYDRTHAESGPKTK 442
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
G L+WL+WRSAY T +S +N+ V V W
Sbjct: 443 ETGRLAWLLWRSAYFTMTLSVKNKILVPVYW 473
>gi|346976033|gb|EGY19485.1| external NADH-ubiquinone oxidoreductase [Verticillium dahliae
VdLs.17]
Length = 564
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 204/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVI +GAE +TFGI GV+EN+ FL+E++ AQ IR+K++ + + G + EE
Sbjct: 201 EIPYDMLVIGVGAENATFGIPGVRENSCFLKEINDAQSIRKKIMDCVETAAFKGQTNEEI 260
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 261 DRLLHMVVVGGGPTGVEFAGELQDFFEDDIKRLVPDIADRFKVTLIEALPNVLPSFSKQL 320
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKL----ILNDGTE----VPYGLLVWSTGVGPST 190
Y + + L + +VK+V + DG++ +PYGLLVW+TG
Sbjct: 321 IEYTENTFKEEKIDILTKTMVKNVTDTTVEAVGTNPDGSKKTIVIPYGLLVWATGNAVRP 380
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
++K L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 381 IIKELISKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 431
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + K G A +A+++E + P
Sbjct: 432 GQEGSFLARLFNNMAKTEELESKVRELSSNLNVKPGNSAEAAREIEACERQLRRIKDVKP 491
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + ++ G L++L WRSAYL+ S RNR V +
Sbjct: 492 FHYTHQGSLAYIGSEKAVADV--SWWNGNIASGGSLTFLFWRSAYLSMCFSTRNRLLVII 549
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 550 DWLKSKAFGRDVSR 563
>gi|443897182|dbj|GAC74523.1| NADH-dehydrogenase [Pseudozyma antarctica T-34]
Length = 481
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 191/375 (50%), Gaps = 63/375 (16%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL-----LNLMLSDVPG 74
+ I YD LV+A+G+ +T+G GVKENA FL++V A+ IR ++L N
Sbjct: 128 YSIGYDYLVVAVGSYNATYGTEGVKENALFLKDVSDARAIRWRILSAFEGTNAAYPQPLS 187
Query: 75 ISEEEKSRL-LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL 132
+EE+ R L VVVGGGPTG EF+ EL D I +D+ + Y H+ + L++A + IL
Sbjct: 188 KEDEEQVRARLGFVVVGGGPTGAEFAAELHDLIRQDLTKIYPHLARLASIKLLDAGKSIL 247
Query: 133 SSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILND---GTE-VPYGLLVWSTGVG 187
SSFD L YA + ++ G+ +V + V Q + + + G E + G++VWSTG+
Sbjct: 248 SSFDKGLAEYAMQKFARDGIEVVLNARINSVTDQGVWVQNPHGGAELMRAGMVVWSTGIT 307
Query: 188 PSTLVKSL----------------------DLPKSPGGRIGIDEWLRVPSVQ-------- 217
+ +VK+L P G I + P Q
Sbjct: 308 AAPIVKALRGVAKEDRSHKWLTDAKLNLLVHQPARDKGEIRGNIHQPAPDKQEGDVVPMT 367
Query: 218 DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP 277
+V+A+GDC S+ T LPA AQVA ++G YL ++ N S +P
Sbjct: 368 NVWAIGDC-----SSQATPLPATAQVANQKGSYLAAVFN----------ASPTHPSAQEP 412
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F ++ GSMA+IG +AL+D K+ G L+WL+WRSAY +SWRNRF V
Sbjct: 413 FKFKDKGSMASIGSNEALIDSPVGKDK------GALAWLLWRSAYTIMAMSWRNRFLVPA 466
Query: 338 NWATTFVFGRDISRI 352
NWA+ +FGRD+ R
Sbjct: 467 NWASNLLFGRDVGRF 481
>gi|403213744|emb|CCK68246.1| hypothetical protein KNAG_0A05830 [Kazachstania naganishii CBS
8797]
Length = 564
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 202/375 (53%), Gaps = 40/375 (10%)
Query: 6 ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLL 65
E+++ +L+ + ISYD LV+++GAE++TF I GV+ENA F++EV A+ +R ++L
Sbjct: 199 ESISGDLKLPDHGVKNISYDYLVVSVGAESTTFNIPGVQENAYFMKEVTDAERVRARILD 258
Query: 66 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL 125
N+ + + + + +LL+ +VVGGGPTGVEF+ EL DF+ +D+++ + + ++L
Sbjct: 259 NIEKASFLPVGDTRRKQLLNFLVVGGGPTGVEFAAELQDFVKQDLKKWLPELSKEVKISL 318
Query: 126 IEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL-NDGTEV--PYGLL 180
+EA IL+ FD L Y T L + L + +VK V ++ N+G EV PYGLL
Sbjct: 319 VEALPSILNMFDQSLIDYTQTLLKHENIDLKLNTMVKKVTKNSIVASNEGKEVEIPYGLL 378
Query: 181 VWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCS---GYLESTG 233
VWSTG P L + + L + R + I++ L++ +D ++A+GDC+ G++ +
Sbjct: 379 VWSTGNKPRVLTQKIMSKLEEQTDRRGLLINDNLQLLGAEDSIYALGDCTFHPGFVPT-- 436
Query: 234 KTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----------------- 276
AQVA ++G+YL L + K + + EL
Sbjct: 437 -------AQVAYQEGRYLAKTLEALFKVEQIKWELDNNQELPTKKIVRLQKELSKHESSI 489
Query: 277 -PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
F Y H+G++A IG KA+ DL LS L W W+S YLT +S RNR V
Sbjct: 490 VAFQYSHMGTLAYIGSEKAIADLNIAGSQYKLSGGPLLYWF-WKSVYLTMCISLRNRVMV 548
Query: 336 AVNWATTFVFGRDIS 350
+W ++FGRD S
Sbjct: 549 TADWINAYIFGRDSS 563
>gi|342886618|gb|EGU86394.1| hypothetical protein FOXB_03088 [Fusarium oxysporum Fo5176]
Length = 577
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 211/387 (54%), Gaps = 76/387 (19%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YDKL+ A+GA + TFGI GV+E+A FLR+V A+ IR ++L +++P ++E++
Sbjct: 211 VPYDKLIFAVGAYSQTFGIPGVREHANFLRDVGDARSIRLRILQCFERAELPSTTDEQRR 270
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLR 140
+LLH VVGGGPTG+EF+ EL D + D+ + Y + ++ +T+ + A +IL FD +L
Sbjct: 271 KLLHFAVVGGGPTGIEFAAELHDLVHDDLARIYPDLMPFVGITVYDIAPKILPMFDKKLS 330
Query: 141 HYATTQLSKSGVRL-----VRGIVKDVDSQ---KLILND-GTEVPYGLLVWSTGVGPSTL 191
Y + G+ + ++ I D D + K+ + + EV G++VWSTG+ + L
Sbjct: 331 SYTIDTFRRQGIHIKTQHHLQSIRPDEDGKGGLKIKIQEYDDEVGAGIVVWSTGLMQNPL 390
Query: 192 VKSL---DLPKSP---------------------GGRIGIDEWLRV-------------- 213
V L D+ ++P G + +D+ LRV
Sbjct: 391 VARLVEQDI-RAPVTREEQQLCKQQTWHIVKAEKSGGLVVDDHLRVRVATGSAQAIDSKS 449
Query: 214 ----PS--VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG--KAGGGR 265
P+ + +V+A+GDC+ +E + LPA AQVA +Q KYL LN+ G +A G +
Sbjct: 450 GHSAPNDILPEVYAIGDCA-VME---REALPATAQVASQQAKYLAKALNKYGFCEAVGNK 505
Query: 266 ANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTR 325
+ PF++ +LG++A IG ++A+ +S + G L+W++WR AY+TR
Sbjct: 506 SK---------PFLFLNLGTIAYIGSWRAIA------QSSSEGVTGRLAWVLWRGAYITR 550
Query: 326 VVSWRNRFYVAVNWATTFVFGRDISRI 352
+S RN+ V V+W T++FGRDISR
Sbjct: 551 SMSIRNKIMVLVHWIMTWLFGRDISRF 577
>gi|367003587|ref|XP_003686527.1| hypothetical protein TPHA_0G02580 [Tetrapisispora phaffii CBS 4417]
gi|357524828|emb|CCE64093.1| hypothetical protein TPHA_0G02580 [Tetrapisispora phaffii CBS 4417]
Length = 546
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 196/360 (54%), Gaps = 35/360 (9%)
Query: 17 PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGIS 76
P +F + YD LV+ +GA+ +TFG GV E+A+FL+E+ AQEIRRK++ + + S
Sbjct: 195 PHEFDVKYDYLVVGVGAQPNTFGTPGVYEHASFLKEISDAQEIRRKVMTTVSSAASLDPS 254
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSF 135
+ E+ RLL +VVGGGPTGVEF+ EL DF+ +D+ + + I VTL+EA+ IL F
Sbjct: 255 DPERKRLLSFIVVGGGPTGVEFAAELQDFVDQDLSKWMPTISKEIKVTLVEASPNILGMF 314
Query: 136 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGPS-- 189
D L Y K + + ++ VK+V + G E PYG+LVW+TG P
Sbjct: 315 DKSLIQYTNDLFKKEKIEVKLKTAVKEVKETTVTTKCGDVVEETPYGILVWATGNAPRDV 374
Query: 190 --TLVKSLDLPKSPGGRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAER 246
L+ L+ S G + ID+ LR+ ++++GDC T L AQVA +
Sbjct: 375 SLKLMSKLEEQNSRRGLL-IDDKLRLLGGNGSIYSIGDC------TFHAGLFPTAQVAFQ 427
Query: 247 QGKYLFSLLNRIGK--------AGGGRANSAKDMELG--------DPFVYRHLGSMATIG 290
+G YL + N+I K + +S + ++ D F Y HLG++A IG
Sbjct: 428 EGVYLGEVFNKIHKIDQLKWELSNTQDKSSQEKIQAKIDIMNSKIDDFKYHHLGALAYIG 487
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA+ D+ ES+ +L+G ++L WR AYL+ +S RN+ VA++W +FGR+ S
Sbjct: 488 SEKAIADIAMG-ESR-YNLSGSFTFLFWRYAYLSMCISARNKVLVALDWIKVSIFGRNSS 545
>gi|353234756|emb|CCA66778.1| related to mitochondrial cytosolically directed NADH dehydrogenase
[Piriformospora indica DSM 11827]
Length = 474
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 193/360 (53%), Gaps = 41/360 (11%)
Query: 12 LRTLEPW----KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
L L+ W F + YDKLVIA+GA TF I GV+E+A FL+E A +IR+++L
Sbjct: 117 LSPLQGWDPSKAFSVKYDKLVIAVGAHTQTFNIPGVREHAYFLKETKDAIKIRKRILGCF 176
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 127
+ +P SEE + +LLH VVGGGPTGVEFS EL D I D+ + Y + + ++L +
Sbjct: 177 EEASLPSTSEERRRQLLHFCVVGGGPTGVEFSAELHDLIHDDLSRHYPSLIPLVSISLYD 236
Query: 128 -ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTG 185
A ILS FD L YA ++ G+ + R V +D + L + V G++VWSTG
Sbjct: 237 VAPRILSMFDSVLADYAANHFARQGIHVHTRRTVTRIDDGVVHLKEEGPVKCGMIVWSTG 296
Query: 186 VGPSTLVKSLDLPKS--PGGRIGIDEWLRV---------PSV-QDVFAVGDCSGYLESTG 233
+ + L+K L K GRI D +L + P V DV+A+GDC+ +E
Sbjct: 297 LDMTPLIKELKGVKKDHKAGRIMTDGYLHLLDSASEAEHPKVIPDVYAIGDCA-VIEGDE 355
Query: 234 KTVLPALAQVAERQGKYLFSLLNRIGK--------AGGGRANSAK------DMELGDPFV 279
LP+ AQVA +QG +L LNR+ K + SA+ D ++G F
Sbjct: 356 ---LPSTAQVASQQGAWLRRHLNRLAKYEAKAIAAPPKAQETSAETTAVDIDSKVGRGFR 412
Query: 280 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
Y ++ ++A +G + A+ + SKG + G ++W +WR AY+T+ +S RN+ V + W
Sbjct: 413 YHNILTLAYLGSWNAIA-----QRSKGHGIRGRIAWFLWRGAYMTKTISLRNKIRVPLLW 467
>gi|407916311|gb|EKG09685.1| hypothetical protein MPH_13207 [Macrophomina phaseolina MS6]
Length = 548
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 199/394 (50%), Gaps = 83/394 (21%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKL+I++G + TFG GVKENA FL++V A++IR +LL + +P S+E
Sbjct: 177 FDLPYDKLIISVGCYSQTFGTPGVKENALFLKDVGDARKIRNRLLACFETASLPTTSDEM 236
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL+ ++GGGPTG+EFS EL D I D+ Q Y + + +T+ + A ++LS FD+
Sbjct: 237 RRNLLNFAIIGGGPTGIEFSAELHDIIREDLAQLYPDLMKFYRITVYDVAPKVLSMFDEN 296
Query: 139 LRHYATTQLSKSGVRL-----VRGIVKDVDSQK--------------LILNDGTEVPYGL 179
L YA T + G+ + V + + V S + L + + EV G+
Sbjct: 297 LSKYAMTTFKREGIDIKTSHHVEELREGVPSHQKSSPGVKEPRSCWTLKIKEEGEVGVGM 356
Query: 180 LVWSTGVGPSTLV-----KSLDLPK----------------------SPGGRIGIDEWLR 212
+VWSTG+ + V K LPK G I + LR
Sbjct: 357 VVWSTGLMMNPFVDQALRKVQPLPKREISLEGQDGQKLEDAWLVKKHPKTGAIITNNQLR 416
Query: 213 V---PS-----------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
V P ++DV+A+GDC G +E T PA AQVA ++ +L LNR
Sbjct: 417 VILEPEGQDEDGKSRAIMEDVYALGDC-GTIEGTN---YPATAQVANQKAVWLAKRLNR- 471
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
D+E G F ++++G MA IG + A++ + G +++G +WL+W
Sbjct: 472 -----------GDIE-GQSFTWKNMGVMAYIGNWNAIM-----QSGGGGNISGRAAWLIW 514
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
R AYLT+ VSWRN+ + V W +VFGRD+SR
Sbjct: 515 RGAYLTKAVSWRNKVLIPVYWFINWVFGRDVSRF 548
>gi|330929751|ref|XP_003302764.1| hypothetical protein PTT_14700 [Pyrenophora teres f. teres 0-1]
gi|311321695|gb|EFQ89159.1| hypothetical protein PTT_14700 [Pyrenophora teres f. teres 0-1]
Length = 561
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 197/409 (48%), Gaps = 83/409 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F ++YDKLV+ +G + TFG GVKE+A FL++V A++IR ++L + +P S E
Sbjct: 160 FDVNYDKLVVTVGCYSQTFGTPGVKEHAFFLKDVGDARKIRNRILACFEGAALPTTSIEM 219
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LL+ VVGGGPTG+EFS EL D I D+R+ Y + Y ++T+ + A ++L FD +
Sbjct: 220 KKQLLNFAVVGGGPTGIEFSAELHDLITEDMRRLYPELIQYHNITVYDVAEKVLPMFDKK 279
Query: 139 LRHYATTQLSKSGVRLV---------------RGIVKDVDSQKLI---LNDGTEVPYGLL 180
L YA + + G+++ R D + L + + E+ G+
Sbjct: 280 LADYALQKFKREGIQIKTSHHVEELRPGAPTGRSQPYDAGEEYLFTLKVKEEGEIGVGMC 339
Query: 181 VWSTGVGPSTLVKS-----------LDLPK--------SP------------GGRIGIDE 209
VWSTG+ + V S L +P SP G I D+
Sbjct: 340 VWSTGLMQNPFVASALSDVREAPTNLHIPSPTSDSATASPSSVKWIVKKDAKSGSIITDD 399
Query: 210 WLRVPSV--------------------QDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
LRV + DVFA+GDC G +EST PA AQVA ++
Sbjct: 400 HLRVKLIPENSSPDSNDSKKTSIEAIHPDVFALGDC-GIIESTS---YPATAQVASQKAF 455
Query: 250 YLFSLLNR------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303
+L N+ I ++S F YR LG++A IG + AL Q
Sbjct: 456 WLAKRFNKADINSDIDPQTSSASSSLNPTTTTKGFTYRDLGTLAYIGNWNALF---QGGG 512
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L G+++W++WR AY+TR VSWRN+ V V W +VFGRDISR
Sbjct: 513 KWGGRLQGYVAWIIWRGAYITRTVSWRNKVLVPVYWVVNWVFGRDISRF 561
>gi|149245526|ref|XP_001527240.1| hypothetical protein LELG_02069 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449634|gb|EDK43890.1| hypothetical protein LELG_02069 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 577
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 201/366 (54%), Gaps = 50/366 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL-----LLNLMLSDVPGIS 76
++YD LV+ +GA+ STFGI GV E++TFL+E+ A IRRKL NL+ D P
Sbjct: 225 LNYDYLVVGVGAQPSTFGIPGVAEHSTFLKEISDASTIRRKLHDIIEAANLLPKDDP--- 281
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 135
E+ RLL VV GGGPTGVE +GE+ D+I +D+ + V+ + VTLIEA +L+SF
Sbjct: 282 --ERKRLLQVVVCGGGPTGVETAGEIQDYIDQDLAKWIPEVQGELKVTLIEALPNVLNSF 339
Query: 136 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 186
+ +L Y + + L+ +VK VD + +I + DG+ EVPYG+L+W+TG
Sbjct: 340 NQKLVDYTKQVFQDTNINLLTNTMVKKVDDKTVICSHKNPDGSTSKLEVPYGVLIWATGN 399
Query: 187 GPSTLVKSL-----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ + L D + G + IDE+L+V +++A+GDC+ + P A
Sbjct: 400 ATRSFTRDLMSKIEDQKNAKRGLL-IDEFLKVDGSDNIYALGDCTF-------SKYPPTA 451
Query: 242 QVAERQGKYLFSLLNRIGKAGGGR---ANSAKDMELGD-------------PFVYRHLGS 285
QVA +QG+YL L ++I + + + A++ ++ F Y + G+
Sbjct: 452 QVAFQQGEYLAKLFDKIHEVESLKYQIQHPAQNQKVESLTRKLDRVEKNLPKFKYNYQGA 511
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG KA+ DL S S GF ++L WRSAY+ +S +N+ V ++W ++F
Sbjct: 512 LAYIGSEKAVADLVWGNWSNITSGGGF-TFLFWRSAYIYMCLSVKNQVLVCLDWVKVWMF 570
Query: 346 GRDISR 351
GRD S+
Sbjct: 571 GRDCSK 576
>gi|302409055|ref|XP_003002362.1| external NADH-ubiquinone oxidoreductase [Verticillium albo-atrum
VaMs.102]
gi|261359283|gb|EEY21711.1| external NADH-ubiquinone oxidoreductase [Verticillium albo-atrum
VaMs.102]
Length = 588
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 204/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVI +GAE +TFGI GV+EN+ FL+E++ AQ IR+K++ + + G + EE
Sbjct: 225 EIPYDMLVIGVGAENATFGIPGVRENSCFLKEINDAQSIRKKIMDCVETAAFKGQTNEEI 284
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 285 DRLLHMVVVGGGPTGVEFAGELQDFFEDDIKRLVPDIADRFKVTLIEALPNVLPSFSKQL 344
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKL----ILNDGTE----VPYGLLVWSTGVGPST 190
Y + + L + +VK+V + DG++ +PYGLLVW+TG
Sbjct: 345 IEYTENTFKEEKIDILTKTMVKNVTDTTVEAVGTNPDGSKKTIVIPYGLLVWATGNAVRP 404
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
++K L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 405 IIKELISKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 455
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + K G A +A+++E + P
Sbjct: 456 GQEGSFLARLFNNMAKTEELESKVRELSSNLNVKPGNSAEAAREIEACERQLRRIKDVKP 515
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + ++ G L++L WRSAYL+ S RNR V +
Sbjct: 516 FHYTHQGSLAYIGSEKAVADV--SWWNGNIASGGSLTFLFWRSAYLSMCFSTRNRLLVII 573
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 574 DWLKSKAFGRDVSR 587
>gi|260942151|ref|XP_002615374.1| hypothetical protein CLUG_04257 [Clavispora lusitaniae ATCC 42720]
gi|238850664|gb|EEQ40128.1| hypothetical protein CLUG_04257 [Clavispora lusitaniae ATCC 42720]
Length = 546
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 197/360 (54%), Gaps = 38/360 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV EN+ FL+EV + +IRR+L+ + +++ + ++
Sbjct: 194 LNYDYLVVGVGAQPSTFGIPGVAENSYFLKEVSDSIKIRRRLMDLIEAANILPKDDPQRK 253
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GEL D+I +D+ V + VTL+EA +L+ F+ +L
Sbjct: 254 RLLSIVVCGGGPTGVEVAGELQDYIDQDIHAWMPEVASELKVTLVEALPNVLNMFNKKLV 313
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPSTL 191
Y + + L +VK VDS+ + DG+ ++PYG+L+W+TG P +
Sbjct: 314 DYTKQVFQDTNIDLKTNTMVKKVDSESVTAQTKAADGSTEMIQIPYGMLIWATGNAPRPI 373
Query: 192 VKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
V++L + + R G +DE L V +++FA+GDCS T AQVA ++
Sbjct: 374 VRNLTSKIEEQKNARRGLLVDERLLVDGTENIFALGDCSF-------TKFAPTAQVAFQE 426
Query: 248 GKYLFSLLNRIGKAGGGRANSAKD---------------MELG-DPFVYRHLGSMATIGR 291
G +L L ++ + + A D +E +PF Y H GS+A IG
Sbjct: 427 GIFLAKHLEKLEEIDALKYKIAHDKSDEHPERLTKKLAKLESNLEPFKYNHQGSLAYIGS 486
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+A+ DL S +S G ++LVWRSAY+ +S +N+ V ++W +FGRDIS+
Sbjct: 487 ERAVADLVWGDWS-NVSSGGTFTFLVWRSAYVYMCLSVKNQILVVLDWLKIGMFGRDISK 545
>gi|342889602|gb|EGU88640.1| hypothetical protein FOXB_00889 [Fusarium oxysporum Fo5176]
Length = 577
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 204/375 (54%), Gaps = 56/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVI +GAE +TFGI GV+EN+ FL+E+ AQ IR+K++ + + G S+EE
Sbjct: 214 EIPYDMLVIGVGAENATFGIPGVRENSCFLKEIGDAQLIRKKIMDCVERASFKGQSQEEI 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L SF +L
Sbjct: 274 DRLMHMVVVGGGPTGVEFAGELRDFFEDDIKKLIPEISHRFKVTLIEALPNVLPSFSKQL 333
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y L + + +V+ + +D + DGT+ +PYGLLVW+TG
Sbjct: 334 IEYTENTLREENIDIKLKTMVKRVTEDFVEAECAGPDGTKQTLRIPYGLLVWATGNAVRP 393
Query: 191 LVKSLDLPKSPGGR-----IGIDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQV 243
+V+ L + K P + + ++E+L V +D++AVGDC +GY + AQV
Sbjct: 394 IVRDL-MSKVPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQV 443
Query: 244 AERQGKYLFSLLNRIGKAGGGRA-----NSAKDMELGD---------------------- 276
A ++G +L L N + K A +S+ +++ G+
Sbjct: 444 ASQEGSFLARLFNNMAKTDSQEARIKELSSSLNLKQGNSAEVAAEIESLEKQLRRIKDVK 503
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG KA+ D+ + ++ G L++L WRSAYL+ S RNR VA
Sbjct: 504 PFRYSHQGSLAYIGSEKAVADVPWF--NGNIASGGGLTYLFWRSAYLSMCFSTRNRVLVA 561
Query: 337 VNWATTFVFGRDISR 351
V+W + FGRD+SR
Sbjct: 562 VDWLKSKAFGRDVSR 576
>gi|302891871|ref|XP_003044817.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725742|gb|EEU39104.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 577
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 203/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVI +GAE +TFGI GV+EN+ FL+E+ AQ IR+K++ + + G S+EE
Sbjct: 214 EIPYDMLVIGVGAENATFGIPGVRENSCFLKEIGDAQLIRKKIMDCVERASFKGQSQEEI 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L SF +L
Sbjct: 274 DRLMHMVVVGGGPTGVEFAGELRDFFEDDIKKLIPEISHRFKVTLIEALPNVLPSFSKQL 333
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y L + + +V+ + ++ + + DG + +PYGLLVW+TG
Sbjct: 334 IEYTENTLREENIDIKLKTMVKRVTEEFVEAECVGPDGKKQTLRIPYGLLVWATGNAVRP 393
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 394 IVRDLMGKVPAQKESRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 444
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + K G A +A+++E + P
Sbjct: 445 SQEGSFLARLFNNMAKTESHESRIKELSSSLNLKQGNSAETAQEIETLEKQLRRIKDVKP 504
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + ++ G L++L WRSAYL+ S RNR VAV
Sbjct: 505 FRYSHQGSLAYIGSEKAVADVPWF--NGNIASGGSLTYLFWRSAYLSMCFSTRNRVLVAV 562
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 563 DWLKSKAFGRDVSR 576
>gi|409043621|gb|EKM53103.1| hypothetical protein PHACADRAFT_210820 [Phanerochaete carnosa
HHB-10118-sp]
Length = 558
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 196/364 (53%), Gaps = 43/364 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV A+GAE TF I GV+ENA F++E+ A++++R+ L + + PG S+EE
Sbjct: 203 MKYDYLVYAVGAETQTFNIPGVRENACFMKELDDAEKMQRRFLDCVESAAFPGQSKEEVD 262
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF+ D+R Y + D I +TL+EA +L F +L
Sbjct: 263 RLLHMVVVGGGPTGVELSGELHDFLEDDLRSWYPELADSIKITLVEALPSVLPMFSKQLI 322
Query: 141 HYATTQLSKSGVRLV-RGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKSL 195
Y + + + ++ + +VK++ + ++L D T EVP G++VW+ G + + L
Sbjct: 323 DYTESTFKAAKIEIMTKTMVKEIKEKSVVLQMPDRTVAEVPCGMVVWAAGNTLRQVTRDL 382
Query: 196 --DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
LP R I +DE LR+ Q VFA+GDC+ T AQVA ++G YL
Sbjct: 383 MAKLPAEQTNRRGISVDESLRMNGAQGVFAIGDCTA-------TSYAPTAQVAAQEGAYL 435
Query: 252 FSLL------------------------NRIGKAGGGRANSAKDMELGDPFVYRHLGSMA 287
+ R K G AK +E PF Y H GS+A
Sbjct: 436 ARVFRQLARRDRLAEELDDARRVPDDSAERKAKVEGLERQVAK-VEKIRPFKYSHQGSLA 494
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
IG KA+ DL S L+ AG ++L WRSAYL+++ S RNR VA +W +FGR
Sbjct: 495 YIGSDKAIADL-PFFSSGNLATAGVATYLFWRSAYLSKLFSLRNRALVATDWIKVKIFGR 553
Query: 348 DISR 351
D+SR
Sbjct: 554 DVSR 557
>gi|154309236|ref|XP_001553952.1| hypothetical protein BC1G_07512 [Botryotinia fuckeliana B05.10]
gi|347837288|emb|CCD51860.1| similar to external NADH-ubiquinone oxidoreductase [Botryotinia
fuckeliana]
Length = 571
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 200/374 (53%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++SYD LV+++GAE +TFGI GVKEN+ FL+E+ AQ IR+K++ + + S EE
Sbjct: 208 EVSYDMLVVSVGAENATFGIPGVKENSCFLKEIGDAQAIRKKIMDCVETATFKDQSPEEV 267
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF +D+++ + D VTLIEA +L F +L
Sbjct: 268 ERLLHMVVVGGGPTGVEFAGELQDFFDQDIKKWVPEISDKFKVTLIEALPNVLPMFSKQL 327
Query: 140 RHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDG---TEV-PYGLLVWSTGVGPST 190
Y + + + + V+ + + I DG TEV PYGLLVW+TG
Sbjct: 328 IEYTESTFKEEKITIKTKTAVKKVTDKTVEAEAIGPDGKKFTEVMPYGLLVWATGNAVRP 387
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++A GDC +GY + AQVA
Sbjct: 388 VVRDLMAQIPAQKDSRRGLAVNEYLVVQGTKDIWATGDCAVAGYAPT---------AQVA 438
Query: 245 ERQGKYLFSLLNRIGKAG-----------------GGRANSAKDMELGD----------P 277
++G +L L N + K G A AKD+E + P
Sbjct: 439 SQEGAFLARLFNTMAKTDTIEHEIQELSSSLNLGPGNAAQVAKDIEAHEKQLRRVKDIKP 498
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GSMA IG +A+ D+ + + + G L++L WRSAYL+ S RNR V +
Sbjct: 499 FHYTHQGSMAYIGSERAVADV--SWLNGNFATGGNLTYLFWRSAYLSMCFSTRNRVLVVL 556
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 557 DWLKSKAFGRDVSR 570
>gi|452837777|gb|EME39719.1| hypothetical protein DOTSEDRAFT_75385 [Dothistroma septosporum
NZE10]
Length = 514
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 189/363 (52%), Gaps = 54/363 (14%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I YDKLVI +G A TF GVKENA FL++V A+ IR +LL ++ +P +EE
Sbjct: 176 FTIDYDKLVITVGCYAQTFNTPGVKENAYFLKDVGDARRIRNRLLSCFEVAALPTTTEEM 235
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K L+ VVGGGPTG+E+S EL D + D+++ Y + +++ +T+ + A +LS FD
Sbjct: 236 KKNYLNFAVVGGGPTGIEWSAELYDMVHEDMKRLYPELIEHVKITVYDVAPNVLSMFDKS 295
Query: 139 LRHYATTQLSKSGV---------RLVRGI---------VKDVDS-QKLILNDGTEVPYGL 179
L +YA ++G+ L G+ KD DS L + + E+ G+
Sbjct: 296 LGNYAMKTFGRNGIDIKTSHHIEELRPGVPQGQRPPPGTKDGDSLYTLKVKEEGEIGTGM 355
Query: 180 LVWSTGVGPSTLVKSLDLPKSP----------GGRIGIDEWLRVPSVQDVFAVGDCSGYL 229
+VWSTG+ + V+ K G + I + P + +VFA+GDC+ L
Sbjct: 356 VVWSTGLMMNPFVEHGLADKVKLHERNHGLVTNGHLQIQDKEGQP-ISNVFALGDCA-VL 413
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATI 289
E T PA AQVA ++ +L LN+ G N F Y+ LG MA I
Sbjct: 414 EGTA---YPATAQVASQKANWLAKQLNK----GTIEQNE---------FKYKDLGVMAYI 457
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G KA++ +S G + G ++WL+WR AYLT+ VSWRN+ + + W + FGRDI
Sbjct: 458 GNQKAIM------QSGGSGINGRIAWLIWRGAYLTKTVSWRNKILIPIYWTLNWFFGRDI 511
Query: 350 SRI 352
SR
Sbjct: 512 SRF 514
>gi|347841838|emb|CCD56410.1| similar to pyridine nucleotide-disulphide oxidoreductase
[Botryotinia fuckeliana]
Length = 564
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 203/399 (50%), Gaps = 81/399 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLV+++G + TFGI GV+ENA FL++V A++IR+++L + +P +
Sbjct: 181 FEVGYDKLVVSVGCYSQTFGIEGVRENALFLKDVGDARKIRKRILECFETAALPTTPDSL 240
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ +LL+ +VGGGPTGVEF+ EL D D+ Y + +I +T+ + A +IL FD
Sbjct: 241 RKQLLNFAIVGGGPTGVEFAAELFDLCHEDLSTLYPSLTPFIKITIYDVAPKILPMFDKN 300
Query: 139 LRHYATTQLSKSGVR---------LVRGIVKD----VDSQK---LILNDGTEVPYGLLVW 182
L +YA + G+ L RG+ K+ D +K L L + +V G+ VW
Sbjct: 301 LANYALEHFKRDGIEIKTEHHILGLQRGLPKEGENGEDGEKGFTLKLKEEGDVGVGMCVW 360
Query: 183 STGVGPSTLV-------------------------------KSLDLPKSPG-GRIGIDEW 210
STG+ + + + +L +SP G + +D +
Sbjct: 361 STGLMMNPFIEKALSSVHTFPTQSAILAGSDSENIAEKLESRKWELKRSPKTGGLMVDNF 420
Query: 211 LRV-----------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
RV ++ DVFA+GD + G LPA AQVA ++ ++L
Sbjct: 421 FRVKLATRSSPDGAKQSQQEATMNDVFALGDVA----VLGDMGLPATAQVANQEARWLGK 476
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
LN++ KA G+ +A+D F +R++G M +G KA++ E KG +
Sbjct: 477 RLNKMEKA--GKIGAAED----KGFTFRNMGVMTYVGGMKAIMQTDGKGEIKGRT----- 525
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W++WR AYLT+ +SWRN+ + + WA ++FGRDISR
Sbjct: 526 AWVIWRGAYLTQTISWRNKILIPMYWAINWLFGRDISRF 564
>gi|449541457|gb|EMD32441.1| hypothetical protein CERSUDRAFT_118779 [Ceriporiopsis subvermispora
B]
Length = 554
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 195/363 (53%), Gaps = 42/363 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TF I GV+ENA F++E+ A++ +R+ L L + PG S+ E
Sbjct: 200 IKYDYLVYAVGAEVQTFNIAGVRENACFMKEMEDAEKTQRRFLDCLESAAFPGQSQAEID 259
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGE+ DF+ D+R Y + ++I ++L+EA +L SF +L
Sbjct: 260 RLLHVVVVGGGPTGVELSGEIHDFLEEDLRSWYPELANHIRISLVEALPSVLPSFSKQLI 319
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L + +VK+V + ++L EVP GL+VW+ G + + L
Sbjct: 320 EYTESTFKEAKIDILTKTMVKEVREKSVVLQMPDKSIVEVPCGLVVWAAGNTHRKITRDL 379
Query: 196 --DLPKSPGGRIGI--DEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
LPK R GI DE+LR+ +FAVGDC+ T AQVA +QG+Y
Sbjct: 380 MAKLPKHQTNRRGITVDEYLRMAGTDGSIFAVGDCTA-------TSYAPTAQVANQQGRY 432
Query: 251 LFSLLNRIGKAGGGRAN--------------SAKD--------MELGDPFVYRHLGSMAT 288
L + ++ K + + KD E PF Y H GS+A
Sbjct: 433 LARVFEQLAKRDALQQRLQAIEAAPAAEEAKAEKDSVQKQLAKAEKLRPFHYSHQGSLAY 492
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL L+ G ++L WRSAY++ + SWRNR V +WA +FGRD
Sbjct: 493 IGSEKAIADL--PFFGGNLATGGVATFLFWRSAYISNLFSWRNRVLVLTDWAKVKLFGRD 550
Query: 349 ISR 351
+SR
Sbjct: 551 VSR 553
>gi|443926222|gb|ELU44935.1| ndb1 (nad(p)h dehydrogenase b1) [Rhizoctonia solani AG-1 IA]
Length = 500
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 188/337 (55%), Gaps = 37/337 (10%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
KF + YDKLVIA GA + TFG GV ++A FL++V A+ IR+++L N + +P S
Sbjct: 185 KFTVKYDKLVIAPGAYSQTFGTPGVTQHAYFLKDVADARRIRQRVLSNFEKAALPTTSPA 244
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY------SHVKDYIHVTLIE-ANEI 131
E+ +LLH +VGGG TGVEF+ EL D + D+ Y S V+++ +T+ + A I
Sbjct: 245 ERDKLLHFAIVGGGATGVEFAAELHDLLHDDLPDLYPTQGTRSLVEEHARITIYDVAPRI 304
Query: 132 LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 190
L FD L +A L + GV + +V+ V+S L G VP+G+LVW+TG+ +
Sbjct: 305 LGMFDTALGEFAERHLKREGVSIRPNHVVERVESGMLHFKGGEAVPFGMLVWATGLATNP 364
Query: 191 LVKSLD-LPKSPG--GRIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
VKSL + K P RI D LRV +++DVFA+GDC+ + VLP AQ
Sbjct: 365 FVKSLKGIEKEPAHQARILTDAKLRVLKEGGEAIEDVFALGDCAAVKDG---PVLPTTAQ 421
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VA ++ YL N + D + FV+++ G++A +G ++A++
Sbjct: 422 VASQKANYLVKHFN------------SGDPDRTTDFVFKNFGALAYLGGWRAIM------ 463
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ + ++ G+ +W++WR AYLT+ VSWRN+ + W
Sbjct: 464 QGESQNIKGWAAWVIWRGAYLTKSVSWRNKILIPTLW 500
>gi|354544989|emb|CCE41714.1| hypothetical protein CPAR2_802640 [Candida parapsilosis]
Length = 577
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 194/355 (54%), Gaps = 33/355 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+ +GA+ STFG+ GV +++TF++EV + I++ L+ + +++ +++E+
Sbjct: 230 LQYDYLVVGIGAQPSTFGLPGVAQHSTFVKEVGDSLRIKKTLIDLVEAANLLPENDKERK 289
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLR 140
RLL+ +V GGGPTGVE +GE+ D+I +D+++ V + VTLIE+ ++L +F+ +L
Sbjct: 290 RLLNVIVCGGGPTGVEAAGEIQDYIDQDLKKWMPEVAKDLKVTLIESQPKVLHTFNPKLV 349
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLIL-----NDGTEVPYGLLVWSTGVG----PST 190
Y + + LV + VD + + D VPYG+L+W+TG
Sbjct: 350 EYTNQVFQDTNINLVTNARINSVDDKYCTVFHKQTKDTEIVPYGMLIWATGNATRDFTHV 409
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
L+ +D K+ ID++L++ ++FA+GDC+ T P AQVA +QG+Y
Sbjct: 410 LMDKIDAQKNAKRGFLIDKYLKLQGSSNIFALGDCTF-------TKYPPTAQVAHQQGEY 462
Query: 251 LFSLLNRI-------------GKAGGGRANSAKDMELGDP-FVYRHLGSMATIGRYKALV 296
L N++ K+ + A +E P FVY + GS+A IG KA+
Sbjct: 463 LADYFNKLQKLSSLKYKIDHESKSSQTLISRADRLEKNLPHFVYNYQGSLAYIGSEKAVA 522
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
DL S +S G L++L WRSAY+ +S +N+ + ++W + FGRD SR
Sbjct: 523 DLAWGSWS-NVSTGGNLTYLFWRSAYIYMCLSVKNQILICIDWLKVYAFGRDCSR 576
>gi|449299789|gb|EMC95802.1| hypothetical protein BAUCODRAFT_34570 [Baudoinia compniacensis UAMH
10762]
Length = 533
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 202/398 (50%), Gaps = 88/398 (22%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLVI++G+ + TFGI GVKENA FL++V A++IR KLL + +P
Sbjct: 159 FSMHYDKLVISVGSYSQTFGIPGVKENAFFLKDVQDARKIRNKLLSCFETAALPTTPVAL 218
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LL+ +VGGGPTG+EFSGEL D D+ + Y + +++ +T+ + A++IL FD++
Sbjct: 219 KKQLLNFAIVGGGPTGIEFSGELKDIFEDDMSRLYPQLAEHVKITVYDVADKILPMFDEK 278
Query: 139 LRHYATTQLSKS--------------GVRLVRGIVKDVDSQK-----LILNDG--TEVPY 177
L YA ++K G + G+ D K L L +G +EV
Sbjct: 279 LAGYALEHIAKGVTVKTSHRIKELRRGFPNIEGVGDFHDDVKASGFTLSLENGHQSEVGC 338
Query: 178 GLLVWSTGV---------------GPSTLVKSL----DLPKSPG----------GRIGID 208
G +VWSTG+ P++ V+ L D P+S G I D
Sbjct: 339 GFVVWSTGLMSNPFVAKALSSSFTAPASCVRLLSNIDDSPESSADWEVQKHPRTGSIVTD 398
Query: 209 EWLRV------------PS--VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
++LRV P+ ++DVFA+GDC+ T P+ AQVA ++ K+L
Sbjct: 399 DYLRVQLGSSASHSEPQPAAILRDVFALGDCA----VIDGTQYPSTAQVAAQKAKWLAKK 454
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
LN+ G N+ F + G MA IGR A+V + + SL+G +
Sbjct: 455 LNK------GDINTQG-------FSFMSQGIMAYIGRMNAIVQMDKG------SLSGRAA 495
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W++WR AYL + +SWRNR + + W ++FGRDISR
Sbjct: 496 WMMWRGAYLVKSISWRNRLLIPMYWTINWIFGRDISRF 533
>gi|46116576|ref|XP_384306.1| hypothetical protein FG04130.1 [Gibberella zeae PH-1]
Length = 575
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 202/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVI +GAE +TFGI GV+EN+ FL+E+ AQ IR+K++ + + G S+EE
Sbjct: 212 EIPYDMLVIGVGAENATFGIPGVRENSCFLKEIGDAQLIRKKIMDCVERASFKGQSQEEI 271
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L SF +L
Sbjct: 272 DRLMHMVVVGGGPTGVEFAGELRDFFEEDIKKLIPDISHRFKVTLIEALPNVLPSFSKQL 331
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + +V+ + +D + DG++ +PYGLLVW+TG
Sbjct: 332 IEYTENTMREENIDIKLKTMVKKVTEDFVEAEFAGPDGSKQTLRIPYGLLVWATGNAVRP 391
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 392 IVRDLMGKVPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 442
Query: 245 ERQGKYLFSLLNRIGKAG-----------------GGRANSAKDME--------LGD--P 277
++G +L L N + K G A A ++E + D P
Sbjct: 443 SQEGSFLARLFNNMAKTDTQEERIKELSSSLNLKQGNSAEIAAEIESLEKQLRRIKDVKP 502
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + ++ G L++L WRSAYL+ S RNR VAV
Sbjct: 503 FRYSHQGSLAYIGSEKAVADVPWF--NGNIASGGGLTYLFWRSAYLSMCFSTRNRVLVAV 560
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 561 DWLKSKAFGRDVSR 574
>gi|154312447|ref|XP_001555551.1| hypothetical protein BC1G_05826 [Botryotinia fuckeliana B05.10]
Length = 564
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 200/399 (50%), Gaps = 81/399 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLV+++G + TFGI GV+ENA FL++V A++IR+++L + +P +
Sbjct: 181 FEVGYDKLVVSVGCYSQTFGIEGVRENALFLKDVGDARKIRKRILECFETAALPTTPDSL 240
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ +LL+ +VGGGPTGVEF+ EL D D+ Y + +I +T+ + A +IL FD
Sbjct: 241 RKQLLNFAIVGGGPTGVEFAAELFDLCHEDLSTLYPSLTPFIKITIYDVAPKILPMFDKN 300
Query: 139 LRHYATTQLSKSGVR---------LVRGIVKD----VDSQK---LILNDGTEVPYGLLVW 182
L +YA + G+ L RG+ K+ D +K L L + +V G+ VW
Sbjct: 301 LANYALEHFKRDGIEIKTEHHILGLQRGLPKEGENGEDGEKGFTLKLKEEGDVGVGMCVW 360
Query: 183 STGVGPSTLV-------------------------------KSLDLPKSPG-GRIGIDEW 210
STG+ + + + +L +SP G + +D +
Sbjct: 361 STGLMMNPFIEKALSSVHTFPTQSAILAGSDSENIAEKPESRKWELKRSPKTGGLMVDNF 420
Query: 211 LRV-----------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
RV ++ DVFA+GD + G LPA AQVA ++ ++L
Sbjct: 421 FRVKLATRSSPDGAKQSQQEATMNDVFALGDVA----VLGDMGLPATAQVANQEARWLGK 476
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
LN++ KAG A K F +R++G M +G KA++ E KG +
Sbjct: 477 RLNKMEKAGNIGAAEDKG------FTFRNMGVMTYVGGMKAIMQTDGKGEIKGRT----- 525
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W++WR AYLT+ +SWRN+ + + WA ++FGRDISR
Sbjct: 526 AWVIWRGAYLTQTISWRNKILIPMYWAINWLFGRDISRF 564
>gi|408400618|gb|EKJ79696.1| hypothetical protein FPSE_00150 [Fusarium pseudograminearum CS3096]
Length = 575
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 202/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVI +GAE +TFGI GV+EN+ FL+E+ AQ IR+K++ + + G S+EE
Sbjct: 212 EIPYDMLVIGVGAENATFGIPGVRENSCFLKEIGDAQLIRKKIMDCVERASFKGQSQEEI 271
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L SF +L
Sbjct: 272 DRLMHMVVVGGGPTGVEFAGELRDFFEEDIKKLIPDISHRFKVTLIEALPNVLPSFSKQL 331
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + +V+ + +D + DG++ +PYGLLVW+TG
Sbjct: 332 IEYTENTMREENIDIKLKTMVKKVTEDFVEAEFAGPDGSKQTLRIPYGLLVWATGNAVRP 391
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 392 IVRDLMGKVPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 442
Query: 245 ERQGKYLFSLLNRIGKAG-----------------GGRANSAKDME--------LGD--P 277
++G +L L N + K G A A ++E + D P
Sbjct: 443 SQEGSFLARLFNNMAKTDTQEERIKELSSSLNLKQGNSAEIAAEIESLEKQLRRIKDVKP 502
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + ++ G L++L WRSAYL+ S RNR VAV
Sbjct: 503 FRYSHQGSLAYIGSEKAVADVPWF--NGNIASGGGLTYLFWRSAYLSMCFSTRNRVLVAV 560
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 561 DWLKSKAFGRDVSR 574
>gi|212538363|ref|XP_002149337.1| alternative NADH-dehydrogenase [Talaromyces marneffei ATCC 18224]
gi|210069079|gb|EEA23170.1| alternative NADH-dehydrogenase [Talaromyces marneffei ATCC 18224]
Length = 584
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 203/373 (54%), Gaps = 52/373 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ +D LV+ +GAE +TFGI GV+EN+ FL+EV AQ+IR++++ + + +E+E
Sbjct: 220 VPFDMLVVGVGAENATFGIPGVRENSCFLKEVGDAQKIRKRIMDCVETASFKDQTEDEVK 279
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVEF+GEL DF D+R+ ++D HVTL+EA IL F +L
Sbjct: 280 RLLHMVVVGGGPTGVEFAGELQDFFEEDLRKWIPGIQDNFHVTLVEALPNILPMFSKQLI 339
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPSTL 191
Y + + + + + +VK V + ++ DGT ++PYGLLVW+TG +
Sbjct: 340 EYTESSFKEEKITIRTKTMVKKVTDKYIEAEVTKPDGTKELEKIPYGLLVWATGNAVRNV 399
Query: 192 VKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
VK L +P R G ++E+L V ++++AVGDC+ T AQVA ++
Sbjct: 400 VKDLMSQIPAQKNSRRGLAVNEFLVVNGTENIWAVGDCA-------ITNYAPTAQVASQE 452
Query: 248 GKYLFSLLNRIGKAGG--------------GRANSAKDMELGD---------------PF 278
G +L L N + K + + A++ + PF
Sbjct: 453 GAFLARLFNTMAKTEALEDELKKLSVAQQEAKNDEARNEIFAEIKERQRQLRRTKQIGPF 512
Query: 279 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ V S RNR VA +
Sbjct: 513 QYSHQGSLAYIGKERAVADI--SWVSGNIASGGTMTYLFWRSAYLSMVFSARNRILVATD 570
Query: 339 WATTFVFGRDISR 351
W +FGRD+SR
Sbjct: 571 WIKAKIFGRDVSR 583
>gi|340520140|gb|EGR50377.1| predicted protein [Trichoderma reesei QM6a]
Length = 578
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 205/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+E++ FL+E+ AQ+IR+K++ + + G + EE
Sbjct: 215 EIPYDMLVVGVGAENATFGIPGVREHSCFLKEIGDAQQIRKKIMDCVETAAFKGQTPEEI 274
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + + VTLIEA +L F L
Sbjct: 275 DRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPDISPHFKVTLIEALPNVLPMFSKTL 334
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y L + + + + +VK V + ++ DG+ E+PYGLLVW+TG
Sbjct: 335 IDYTENTLREEKIDIKTKTMVKKVTDKTVEAEVSRPDGSKERVEIPYGLLVWATGNAVRP 394
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 395 IVKDLASKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 445
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + K G A +A+++EL + P
Sbjct: 446 SQEGSFLGKLFNNMAKTESYEQRIQELSSKMNIETGNSAEAAQEIELLERQLKKIRDVKP 505
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V +
Sbjct: 506 FRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFSTRNRVLVLL 563
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 564 DWLKSKAFGRDVSR 577
>gi|336470054|gb|EGO58216.1| hypothetical protein NEUTE1DRAFT_122492 [Neurospora tetrasperma
FGSC 2508]
gi|350290254|gb|EGZ71468.1| FAD/NAD(P)-binding domain-containing protein [Neurospora
tetrasperma FGSC 2509]
Length = 577
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 202/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+E+ FL+E+ AQ IR+K++ + + G S+EE
Sbjct: 214 EIPYDMLVVGVGAENATFGIPGVREHTCFLKEIGDAQRIRKKIMDCVETAAFKGQSQEEI 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 274 DRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLIPDIADRFRVTLIEALPNVLPSFSKQL 333
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + +V+ + + ++ DGT +PYGLLVW+TG
Sbjct: 334 IEYTESTFKEEKIDIMTKTMVKRVTEKTVEAEISKPDGTREKITLPYGLLVWATGNAVRP 393
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 394 VVKDLMERIPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 444
Query: 245 ERQGKYLFSLLNRIGK-----------------AGGGRANSAKDMELGD----------P 277
++G +L L N + + A G A +K++E + P
Sbjct: 445 SQEGNFLAGLFNNMARTEVLEQRVRELSGSLNLAPGNAAEISKEIEEHERQLRRIKDIKP 504
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V
Sbjct: 505 FHYSHQGSLAYIGSEKAVADV--SWFNGNLASGGSLTFLFWRSAYLSMCFSTRNRLLVIN 562
Query: 338 NWATTFVFGRDISR 351
+W + +FGRD+SR
Sbjct: 563 DWVKSKLFGRDVSR 576
>gi|85091656|ref|XP_959008.1| hypothetical protein NCU11397 [Neurospora crassa OR74A]
gi|28920404|gb|EAA29772.1| hypothetical protein NCU11397 [Neurospora crassa OR74A]
Length = 577
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 202/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+E+ FL+E+ AQ IR+K++ + + G S+EE
Sbjct: 214 EIPYDMLVVGVGAENATFGIPGVREHTCFLKEIGDAQRIRKKIMDCVETAAFKGQSQEEI 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 274 DRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLIPDIADRFRVTLIEALPNVLPSFSKQL 333
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + +V+ + + ++ DGT +PYGLLVW+TG
Sbjct: 334 IEYTESTFKEEKIDIMTKTMVKRVTEKTVEAEISKPDGTREKITLPYGLLVWATGNAVRP 393
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 394 VVKDLMERIPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 444
Query: 245 ERQGKYLFSLLNRIGK-----------------AGGGRANSAKDMELGD----------P 277
++G +L L N + + A G A +K++E + P
Sbjct: 445 SQEGNFLAGLFNNMARTEVLEQRVRELSGSLNLAPGNAAEISKEIEEHERQLRRIKDIKP 504
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V
Sbjct: 505 FHYSHQGSLAYIGSEKAVADV--SWFNGNLASGGSLTFLFWRSAYLSMCFSTRNRLLVIN 562
Query: 338 NWATTFVFGRDISR 351
+W + +FGRD+SR
Sbjct: 563 DWVKSKLFGRDVSR 576
>gi|429855295|gb|ELA30259.1| alternative nadh-dehydrogenase [Colletotrichum gloeosporioides Nara
gc5]
Length = 583
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 203/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++SYD LV+ +GAE +TFGI GV+EN+ FL+E+ AQ IR+K++ + + S E+
Sbjct: 220 QVSYDMLVVGVGAENATFGIPGVRENSCFLKEIGDAQAIRKKIMDCVETAAFKDQSAEDI 279
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
SRL+H VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 280 SRLMHMVVVGGGPTGVEFAGELQDFFEEDIKRLVPEIADRFKVTLIEALPNVLPSFSKQL 339
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLIL----NDGTE----VPYGLLVWSTGVGPST 190
Y + + L + +VK V ++ + DG + +PYGLLVW+TG
Sbjct: 340 IEYTEKTFEEEKIDILTKTMVKKVTNETVEAVATGPDGKQQTLTIPYGLLVWATGNAVRP 399
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 400 IVRDLISKIPAQKDSRRGLAVNEYLVVQGARDIWAIGDCAVAGYAPT---------AQVA 450
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + + G A AK++E + P
Sbjct: 451 AQEGNFLAKLFNNMARTESLEARVQELSANLNVKPGNAAEVAKEIEAHERQLRRIKDIKP 510
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + ++ G +++L WRSAYL+ S RNR V
Sbjct: 511 FHYSHQGSLAYIGSEKAVADV--SWWNGNIASGGSMTYLFWRSAYLSMCFSTRNRLLVIN 568
Query: 338 NWATTFVFGRDISR 351
+W + VFGRDISR
Sbjct: 569 DWLKSKVFGRDISR 582
>gi|448509261|ref|XP_003866100.1| Ymx6 NADH dehydrogenase [Candida orthopsilosis Co 90-125]
gi|380350438|emb|CCG20660.1| Ymx6 NADH dehydrogenase [Candida orthopsilosis Co 90-125]
Length = 571
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 195/355 (54%), Gaps = 33/355 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+ +GA+ STFG+ GV +++TF++EV + I++ L+ + +++ +++E+
Sbjct: 224 LQYDYLVVGIGAQPSTFGLPGVAQHSTFVKEVGDSLRIKKTLIDLVEAANLLPENDKERK 283
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLR 140
RLLH +V GGGPTGVE +GE+ D+I +D+++ V + VTLIE+ ++L +F+ +L
Sbjct: 284 RLLHVIVCGGGPTGVEAAGEIQDYIDQDLKKWMPEVAKDLKVTLIESQPKVLHTFNPKLV 343
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLIL-----NDGTEVPYGLLVWSTGVG----PST 190
Y + + LV + VD + + D VPYG+L+W+TG
Sbjct: 344 EYTNQVFQDTNINLVTSARINSVDDKYCTVFHKQSKDTEIVPYGMLIWATGNATRDFTHV 403
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
L+ ++ K+ +D++L++ ++FA+GDC+ T P AQVA +QG+Y
Sbjct: 404 LMDKVEEQKNAKRGFLVDKYLKLQGSSNIFALGDCTF-------TKYPPTAQVAHQQGEY 456
Query: 251 LFSLLNRIGKAGGGR-------------ANSAKDMELGDP-FVYRHLGSMATIGRYKALV 296
L + +++ K R + A +E P F+Y + GS+A IG KA+
Sbjct: 457 LANYFDKLQKLSSLRYKIDHEQNPSETLKSRAVRLEKNLPHFIYNYQGSLAYIGSEKAVA 516
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
DL S +S G L++L WRSAY+ +S +N+ + ++W + FGRD SR
Sbjct: 517 DLAWGSWS-NVSTGGNLTYLFWRSAYIYMCLSVKNQILICIDWLKVYAFGRDCSR 570
>gi|358392118|gb|EHK41522.1| hypothetical protein TRIATDRAFT_295401 [Trichoderma atroviride IMI
206040]
Length = 541
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 198/406 (48%), Gaps = 75/406 (18%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
V E R + F + YDKLVIA+GA + TFGI GV+E+A FLR++ A+ IR ++L
Sbjct: 150 VATETRPPKGEIFDVEYDKLVIAVGAYSQTFGIAGVREHAHFLRDIGDARRIRLRVLSLF 209
Query: 68 MLSDVPG-------------ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY 114
P ++E+EK LLH V+VGGGPTG+EF+ EL D I D+++ Y
Sbjct: 210 EQCSYPASPGGKDSKTAGRPLTEDEKKSLLHFVIVGGGPTGIEFAAELHDLIHEDLKKIY 269
Query: 115 SHVKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGV-----------RLVRGIVKDV 162
+ + +T+ + A ++L FD L YA ++ G+ R+ G +
Sbjct: 270 PELMPLVRITVYDVAPKVLPMFDKALAQYAMEVFARQGIQVRTEHHLEGIRVADGTLGSA 329
Query: 163 D---SQKLILNDGTEVPYGLLVWSTGVGPS-----------TLVKSLDLPKSP------G 202
S K+ EV GL+VWSTG+ + T V+ + PKS
Sbjct: 330 HGGLSIKIKEYGDKEVEAGLVVWSTGLMQNPFVEQMVNKQFTAVQEAEAPKSHLLKDPRT 389
Query: 203 GRIGIDEWLRV----------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
G I D +LR P + DVF +GDC+ G LP AQVA +
Sbjct: 390 GGIVTDGYLRARITDSKISESNETAAAPVLPDVFVIGDCAVV---EGNESLPKTAQVASQ 446
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 306
Q +L LNR SA PF +R+ G++ +G +KA+ +S
Sbjct: 447 QAAHLARQLNRSTNDDSIDIKSA-----WKPFKFRNWGTLTYLGGWKAI------HQSSA 495
Query: 307 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L G+++W+VWR AYLTR +S RN+ V V W ++VFGRDISR
Sbjct: 496 DTLRGWVAWIVWRGAYLTRSMSVRNKLMVPVYWFVSWVFGRDISRF 541
>gi|398408349|ref|XP_003855640.1| hypothetical protein MYCGRDRAFT_107974 [Zymoseptoria tritici
IPO323]
gi|339475524|gb|EGP90616.1| hypothetical protein MYCGRDRAFT_107974 [Zymoseptoria tritici
IPO323]
Length = 578
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 201/374 (53%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+E+ FL+EV AQ+IR+K++ + S +E
Sbjct: 213 EVPFDMLVVGVGAENATFGIPGVREHGCFLKEVGDAQKIRKKIMDCCETATFKDQSPDEV 272
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+R+ +KD HVTL+EA +L SF L
Sbjct: 273 KRLLHTVVVGGGPTGVEFAGELQDFFENDLRKWIPEIKDNFHVTLVEALPNVLPSFSKSL 332
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTEV----PYGLLVWSTGVGPST 190
Y + + + + +VK+V + + + +G +V PYGLLVW+TG
Sbjct: 333 IDYTEQTFKEETIDIRTKTMVKNVTEKYIEAEYVDANGQKVLEKIPYGLLVWATGNALRP 392
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
LVK L +P R G ++E+L V ++++AVGDC+ + + T AQVA +
Sbjct: 393 LVKDLMSQIPAQKESRRGLAVNEYLVVKGTENIWAVGDCA--IANYAPT-----AQVASQ 445
Query: 247 QGKYLFSLLNRIGKA--------------GGGRANSAKDMELGD---------------P 277
+G +L L N++ K G A+ D P
Sbjct: 446 EGAFLARLFNQMAKTEEIESQLLSLSEAQGNAPNKEARQQAFEDIKDLQKRLRRVKQMGP 505
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GSMA IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V V
Sbjct: 506 FEYSHQGSMAYIGSEKAVADI--SWLTGNLASGGQLTYLFWRSAYLSMCFSSRNRILVFV 563
Query: 338 NWATTFVFGRDISR 351
+W +++FGRD+SR
Sbjct: 564 DWFKSYLFGRDVSR 577
>gi|452986422|gb|EME86178.1| hypothetical protein MYCFIDRAFT_88293 [Pseudocercospora fijiensis
CIRAD86]
Length = 527
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 202/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+EN+ FL+EV AQ+IR++++ + S EE+
Sbjct: 162 EVPFDMLVVGVGAENATFGIPGVRENSCFLKEVGDAQKIRKRIMDCCETATFKDQSPEER 221
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF +D+++ ++D HVTL+EA +L F L
Sbjct: 222 KRLLHMVVVGGGPTGVEFAGELQDFFEQDLKKWIPEIQDNFHVTLVEALPSVLPMFSKSL 281
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKL--ILNDGT------EVPYGLLVWSTGVGPST 190
Y + + + + +VK+V + D + ++PYGLLVW+TG
Sbjct: 282 IDYTEKTFKEETIEIRTKTMVKNVTPTYIEAEFTDSSGRKQLEKIPYGLLVWATGNAVRP 341
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
LVK L +P R G ++E+L V +V+AVGDC+ + + T AQVA +
Sbjct: 342 LVKDLINQIPAQKDSRRGLAVNEYLVVKGTDNVWAVGDCA--VANYAPT-----AQVASQ 394
Query: 247 QGKYLFSLLNRIGKA--------------GGGRANSAKDMELGD---------------P 277
+G +L L N++ K G A+D G+ P
Sbjct: 395 EGAFLARLFNQMAKTEEIEGKLSALSEEQGKAPNQEARDKIFGEIKDLQKRLRRVKQMGP 454
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V +
Sbjct: 455 FEYSHQGSLAYIGSEKAVADI--SWLTGNLASGGQLTYLFWRSAYLSMCFSTRNRVLVIM 512
Query: 338 NWATTFVFGRDISR 351
+W +++FGRD+SR
Sbjct: 513 DWLKSYIFGRDVSR 526
>gi|384494268|gb|EIE84759.1| hypothetical protein RO3G_09469 [Rhizopus delemar RA 99-880]
Length = 440
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 195/350 (55%), Gaps = 34/350 (9%)
Query: 27 LVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHC 86
+V+ +GA++ TFGI GV+E FL+EV AQ+IR KL+ + + PG S+EE RLLH
Sbjct: 99 VVLGVGAQSQTFGIKGVEEYGCFLKEVWDAQKIRTKLMDCIETAAFPGQSQEEIERLLHM 158
Query: 87 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATT 145
VVVGGGPTGVE++ EL DF++ D+ Y + + +TL+EA +L +F +L Y +
Sbjct: 159 VVVGGGPTGVEYAAELHDFLVDDLTAWYPELAGKVKITLVEAMPNVLPAFSKQLIDYTES 218
Query: 146 QLSKSGVRL-VRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKSL--DLP 198
+ + + + +VK+V +++++ DG +PYGLLVW+TG LVK+L P
Sbjct: 219 TFKEQHIDIHTKTMVKEVKEKEIVVQRPDGKVDAIPYGLLVWATGNTSRPLVKNLMAQYP 278
Query: 199 KSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL---FS 253
++ R G +D+WLR+ QD++A+GDC+ T AQVA +QGKYL F+
Sbjct: 279 EAQNVRRGLVVDDWLRMSGTQDIYALGDCTA-------TKYAPTAQVAAQQGKYLARVFA 331
Query: 254 LLNRIGKAGGGRANSAKDMELG------------DPFVYRHLGSMATIGRYKALVDLRQN 301
L+ N+A + E PF Y H GS+ IG KA+ DL
Sbjct: 332 QLHATEHYEAEIENAATEEEKAKKLRKLQKAQDIKPFHYSHQGSLCYIGSDKAIADLPLG 391
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
L+ G ++ WRSAY++ + S RNR+ V +W +GRDISR
Sbjct: 392 --PGNLASGGVATFAFWRSAYISNIFSARNRWLVITDWTKKTFWGRDISR 439
>gi|119495566|ref|XP_001264565.1| alternative NADH-dehydrogenase [Neosartorya fischeri NRRL 181]
gi|119412727|gb|EAW22668.1| alternative NADH-dehydrogenase [Neosartorya fischeri NRRL 181]
Length = 571
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 204/377 (54%), Gaps = 58/377 (15%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISE 77
++ +D LV+ +GAE +TFGI GVKE++ FL+EV AQ+IR++++ M D P E
Sbjct: 206 EVPFDMLVVGVGAENATFGIKGVKEHSCFLKEVGDAQKIRKRIMDCVETAMFKDQP---E 262
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F
Sbjct: 263 EEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPEIKDNFHVTLVEALPNVLPMFS 322
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVG 187
+L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 323 KQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGNA 382
Query: 188 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+V+ L +P R G ++E+L V ++V+AVGDC+ T AQV
Sbjct: 383 VRNVVRDLMNQIPAQKNSRRGLAVNEYLVVNGAENVWAVGDCAV-------TNYAPTAQV 435
Query: 244 AERQGKYLFSLLNRIGK-------------AGGGRANSAKDMELGD-------------- 276
A ++G +L L N + K A N + ++ D
Sbjct: 436 ASQEGAFLARLFNTMAKTEAIEKELKKLSEAQAEAKNEEERNKIFDEIRERQKQLRRTKQ 495
Query: 277 --PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 496 IGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTVTYLFWRSAYLSMCFSTRNRVL 553
Query: 335 VAVNWATTFVFGRDISR 351
VA +W +FGRD+SR
Sbjct: 554 VAADWLKAKIFGRDVSR 570
>gi|344233947|gb|EGV65817.1| FAD/NAD(P)-binding domain-containing protein [Candida tenuis ATCC
10573]
Length = 542
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 198/373 (53%), Gaps = 41/373 (10%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L ++E ++YD LV+ +GA+ STFGI GV EN+ FL+EV + +IR+KL+ + ++
Sbjct: 177 LNSVEEITTSLNYDYLVVGVGAQPSTFGIPGVAENSLFLKEVSDSIKIRKKLMDVVEAAN 236
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 130
+ + ++ RLL VV GGGPTGVE +GEL D+I +D+++ V + VTL+EA
Sbjct: 237 ILPKGDADRKRLLSIVVCGGGPTGVEVAGELQDYIDQDLKKWIPEVASEVKVTLVEALPN 296
Query: 131 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-----DGT----EVPYGLL 180
+L+ F+ +L Y + + L +VK V + +I DG+ E+PYGLL
Sbjct: 297 VLNMFNKKLVDYTKQVFQDTNIDLKTNTMVKQVTDKNVIAQVKSPKDGSTEIVEIPYGLL 356
Query: 181 VWSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTV 236
+W+TG P + + L + + R G +++ L V ++FA+GDC+ T
Sbjct: 357 IWATGNAPRPITRDLTSKIEEQKNARRGLLVNDKLLVDGTDNIFALGDCTF-------TK 409
Query: 237 LPALAQVAERQGKYL---FSLLNRIGKAGGGRAN---------------SAKDMELGDPF 278
AQVA ++G +L F L+ I N SAK E F
Sbjct: 410 FAPTAQVAFQEGIFLGSHFKKLHEIESLDFQVKNAKDLDSVQIERLSKKSAKLKEKLPIF 469
Query: 279 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
Y H GS+A IG +A+ DL S ++ G +++L WRSAY+ +S RN+F V ++
Sbjct: 470 KYNHQGSLAYIGSERAVADLVWGDWS-NVTTGGTITYLFWRSAYIYMCLSVRNQFLVCLD 528
Query: 339 WATTFVFGRDISR 351
W +FGRDISR
Sbjct: 529 WMKVSLFGRDISR 541
>gi|380094173|emb|CCC08390.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 578
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 204/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+E+ FL+E+ AQ IR+K++ + + G S+EE
Sbjct: 215 EIPYDMLVVGVGAENATFGIPGVREHTCFLKEIGDAQRIRKKIMDCVETAAFKGQSQEEI 274
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 275 DRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLIPDIADRFRVTLIEALPNVLPSFSKQL 334
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + ++ + +VK V + ++ DGT +PYGLLVW+TG
Sbjct: 335 IEYTESTFKEEKIDIMTKTMVKKVTDKTVEAEISKPDGTREKITLPYGLLVWATGNAVRP 394
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 395 VVKDLMERIPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 445
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + + G A +K++E + P
Sbjct: 446 SQEGNFLAGLFNNMARTEVLEQRVRELSGSLNLQPGNAAEISKEIEEHERQLRRIKDIKP 505
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V
Sbjct: 506 FHYSHQGSLAYIGSEKAVADV--SWFNGNLASGGSLTFLFWRSAYLSMCFSTRNRLLVIN 563
Query: 338 NWATTFVFGRDISR 351
+W + +FGRD+SR
Sbjct: 564 DWVKSKLFGRDVSR 577
>gi|156844626|ref|XP_001645375.1| hypothetical protein Kpol_1058p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156116036|gb|EDO17517.1| hypothetical protein Kpol_1058p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 546
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 43/365 (11%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
EP + YD LV+ +GA+ +TFG GV E+A+FL+E+ AQEIR K++ ++ + +
Sbjct: 194 EPLIEDLKYDYLVVGVGAQPNTFGTPGVYEHASFLKEISDAQEIRGKIMNSVAKAAILPP 253
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 134
++ E+ +LL+ +VVGGGPTGVEF+ EL D+I +D+ + + I V L+EA IL S
Sbjct: 254 NDPERQKLLNFIVVGGGPTGVEFAAELKDYIDQDLSKWMPQISKEIKVILVEATPNILGS 313
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEV---PYGLLVWSTGVGP-- 188
F+ L YA + + L ++ VK VD + G +V PYG+LVW+TG P
Sbjct: 314 FEPSLIQYAKDLFKRERIHLKLKTAVKGVDDDYVTTKCGDDVEKIPYGVLVWATGNAPRE 373
Query: 189 --STLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL---AQ 242
L++ LD S G + I+E L++ D +FAVGDC T P L AQ
Sbjct: 374 VSKKLMEKLDEQDSRRGLL-INEKLQLLGGNDSIFAVGDC---------TFHPGLFPTAQ 423
Query: 243 VAERQGKYLFSLLNRIGK-------AGGGRANSAKD----------MELGDPFVYRHLGS 285
VA ++ YL + N++ K A + S+K ++G+ F Y H+G+
Sbjct: 424 VAHQESLYLGEVFNKLYKIDQLKWEASQTKDTSSKQKLESRAQVLAAKIGN-FKYNHMGA 482
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG KA+ DL ESK S++G ++L W+ AYL+ +S+RN+ VA++W +
Sbjct: 483 LAYIGSEKAVADLAIG-ESK-YSMSGSFTFLFWKYAYLSMCLSFRNKVLVAMDWIKVSIL 540
Query: 346 GRDIS 350
GR+ S
Sbjct: 541 GRNSS 545
>gi|336268298|ref|XP_003348914.1| hypothetical protein SMAC_01935 [Sordaria macrospora k-hell]
Length = 554
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 204/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+E+ FL+E+ AQ IR+K++ + + G S+EE
Sbjct: 191 EIPYDMLVVGVGAENATFGIPGVREHTCFLKEIGDAQRIRKKIMDCVETAAFKGQSQEEI 250
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 251 DRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLIPDIADRFRVTLIEALPNVLPSFSKQL 310
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + ++ + +VK V + ++ DGT +PYGLLVW+TG
Sbjct: 311 IEYTESTFKEEKIDIMTKTMVKKVTDKTVEAEISKPDGTREKITLPYGLLVWATGNAVRP 370
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 371 VVKDLMERIPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 421
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + + G A +K++E + P
Sbjct: 422 SQEGNFLAGLFNNMARTEVLEQRVRELSGSLNLQPGNAAEISKEIEEHERQLRRIKDIKP 481
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V
Sbjct: 482 FHYSHQGSLAYIGSEKAVADV--SWFNGNLASGGSLTFLFWRSAYLSMCFSTRNRLLVIN 539
Query: 338 NWATTFVFGRDISR 351
+W + +FGRD+SR
Sbjct: 540 DWVKSKLFGRDVSR 553
>gi|449295148|gb|EMC91170.1| hypothetical protein BAUCODRAFT_80098 [Baudoinia compniacensis UAMH
10762]
Length = 504
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 191/363 (52%), Gaps = 53/363 (14%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F +SYD L IA+G + TF GVKE+A FL++V A+ IR +LL + +P S E
Sbjct: 165 FSMSYDSLAIAVGCYSQTFNTPGVKEHAYFLKDVGDARRIRNRLLSCFETAALPTTSIEM 224
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LL+ VVGGGPTG+E+S EL D + D+ + Y + +Y +T+ + A ++LS FD++
Sbjct: 225 KKQLLNFAVVGGGPTGIEWSAELHDLVKEDMAKLYPELVEYARITVYDVAPKVLSMFDEK 284
Query: 139 LRHYATTQLSKSGV---------RLVRGIVKDVDSQKLILNDGT-----------EVPYG 178
L YA + G+ L RG +V ++K + DGT EV G
Sbjct: 285 LSKYAMDTFKRQGINIQTSHHVEELRRGAPGNV-AEKPGVKDGTTIYTIKLKEEGEVGVG 343
Query: 179 LLVWSTGVGPSTLV-KSLDLP---KSPGGRIGIDEWLRVPS-----VQDVFAVGDCSGYL 229
+ VWSTG+ + V K+LD I ++ ++V + + D++A+GDC+ L
Sbjct: 344 MCVWSTGLMMNPFVEKALDSKVKRHEKSHAILTNDRMQVKAPDESIIPDLYALGDCA-IL 402
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATI 289
E T P+ AQVA ++ +L LN++ G F Y+ LG MA +
Sbjct: 403 EGTS---YPSTAQVANQKAHWLAKRLNKMDLHRNG-------------FTYKDLGVMAYV 446
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G + A++ + S ++G ++W +WR AYL + VSWRNR + WA +FGRDI
Sbjct: 447 GNWNAIL-----QASGAGDISGRVAWFIWRGAYLAKSVSWRNRILIPTYWAVNAIFGRDI 501
Query: 350 SRI 352
SR
Sbjct: 502 SRF 504
>gi|170116640|ref|XP_001889510.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635512|gb|EDQ99818.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 566
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 198/369 (53%), Gaps = 48/369 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TF I GVKENA F++E+H A+ ++R+ + + + PG + EE
Sbjct: 206 IPYDYLVYAVGAEVQTFNIPGVKENACFMKELHDAENMQRRFMDCVETAAFPGQATEEVD 265
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF+ D++ Y + I +TL+EA +L SF +L
Sbjct: 266 RLLHMVVVGGGPTGVELSGELHDFLEDDLKSWYPELAGKIRITLVEALPSVLPSFSKQLI 325
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKSL 195
+Y + +S + L + +VK+V + ++L D + E+P G++VW+ G L + L
Sbjct: 326 NYTESTFKESKIDILTKTMVKEVKEKSVVLQMPDKSIQEMPCGMVVWAAGNKGRKLTQDL 385
Query: 196 --DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
LP + R G +D++LR+ QD +FA+GDC+ T AQVA +QG Y
Sbjct: 386 MAKLPTTQTNRRGLLVDDYLRMQGAQDSIFAIGDCTA-------TSYAPTAQVASQQGAY 438
Query: 251 LFSLLNRIGKAGG-----GRANSAKDMELGD-----------------------PFVYRH 282
L +L + K + S+ D G+ PF Y H
Sbjct: 439 LARVLGSLAKKENLKNMLHQLESSIDQVKGEEEKKAAVAEIESVRNQSAKIKLRPFHYSH 498
Query: 283 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 342
GS+A IG KA+ DL + ++ G ++L WRSAYL+ + S RNR V +W
Sbjct: 499 QGSLAYIGSEKAIADL--PFMNGNIASGGVATYLFWRSAYLSTLFSLRNRTLVGTDWVKV 556
Query: 343 FVFGRDISR 351
+FGRD+SR
Sbjct: 557 KLFGRDVSR 565
>gi|310789750|gb|EFQ25283.1| hypothetical protein GLRG_00427 [Glomerella graminicola M1.001]
Length = 583
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 202/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LV+ +GAE +TFGI GV+EN+ FL+E+ AQ IR+K++ + + S E+
Sbjct: 220 EVAYDMLVVGVGAENATFGIPGVRENSCFLKEIGDAQAIRKKIMDCVETAAFKDQSAEDV 279
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
+RL+H VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 280 NRLMHMVVVGGGPTGVEFAGELQDFFEEDIKRLVPEIADRFKVTLIEALPNVLPSFSKQL 339
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPST 190
Y + + L + +VK+V + DG + +PYGLLVW+TG
Sbjct: 340 IEYTEKTFKEEKIDILTKTMVKNVTDTHVQAEATGPDGKKQTLTIPYGLLVWATGNAVRP 399
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 400 IVRDLISKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 450
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + + G A AK++E + P
Sbjct: 451 AQEGSFLARLFNNMARTETVEARVRELSKDLNLKPGNAAEVAKEIEAHERQLRRIKDIKP 510
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GSMA IG KA+ D+ + + ++ G +++L WRSAYL+ S RNR V
Sbjct: 511 FHYSHQGSMAYIGSEKAVADV--SWWNGNIASGGSMTYLFWRSAYLSMCFSTRNRLLVVN 568
Query: 338 NWATTFVFGRDISR 351
+W + VFGRDISR
Sbjct: 569 DWLKSKVFGRDISR 582
>gi|358382239|gb|EHK19912.1| hypothetical protein TRIVIDRAFT_77030 [Trichoderma virens Gv29-8]
Length = 534
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 202/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+E++ FL+E+ AQ+IR+K++ + + G + EE
Sbjct: 171 EIPYDMLVVGVGAENATFGIPGVREHSCFLKEIGDAQQIRKKIMDCVETAAFKGQTPEEI 230
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L F L
Sbjct: 231 DRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPDISPRFKVTLIEALPNVLPMFSKTL 290
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 190
Y L + + +V+ + + ++ DG+ ++PYGLLVW+TG
Sbjct: 291 IDYTENTLREEKIDIKTKTMVKRVTEKAVEAEVSRPDGSKERVQIPYGLLVWATGNAVRP 350
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
++K L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 351 IIKDLASKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 401
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + K G A +A+++EL + P
Sbjct: 402 SQEGTFLGKLFNNMAKTENHEGRIQELSSKLNIESGNSAEAAQEIELLERQLKKIRDVKP 461
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V V
Sbjct: 462 FKYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFSTRNRVLVLV 519
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 520 DWLKSKAFGRDVSR 533
>gi|358399441|gb|EHK48784.1| hypothetical protein TRIATDRAFT_290334 [Trichoderma atroviride IMI
206040]
Length = 547
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 204/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ +GAE +TFGI GV+EN+ FL+E+ AQ+IR+K++ + + + EE
Sbjct: 184 EIPYDMLVVGVGAENATFGIPGVRENSCFLKEIGDAQQIRKKIMDCVETAAFKDQTPEEV 243
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L F L
Sbjct: 244 DRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPDISPRFKVTLIEALPNVLPMFSKTL 303
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y L + + + + +VK V + ++ DGT E+PYGLLVW+TG
Sbjct: 304 IDYTENTLREEKIDIKTKTMVKRVTDKTVEAEVSRPDGTKERVEIPYGLLVWATGNAVRP 363
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 364 IVKDLASKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 414
Query: 245 ERQGKYLFSLLNRIGK-----------------AGGGRANSAKDMELGD----------P 277
++G +L L N + K AGG A +++++EL + P
Sbjct: 415 SQEGYFLGKLFNNMAKTENHEDRISELSGKLNIAGGNSAEASQEIELLERQLKKIRDIKP 474
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + + L+ G +++L WRS YL+ S RNR V +
Sbjct: 475 FKYSHQGSLAYIGSDKAVADV--SWWNGNLATGGSVTYLFWRSVYLSMCFSPRNRVLVLL 532
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 533 DWLKSKAFGRDVSR 546
>gi|406867436|gb|EKD20474.1| NADH-ubiquinone oxidoreductase C3A11.07 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 574
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 202/376 (53%), Gaps = 54/376 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K +++YD LV+++GAE +TFGI GVKE+A FL+E+ AQ IR+K++ + + G + E
Sbjct: 209 KTEVAYDMLVVSVGAENATFGIQGVKEHACFLKEIGDAQTIRKKIMDCVETATFKGQTPE 268
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLLH VVVGGGPTGVEF+GEL DF +D+++ + D VTLIEA +L +F
Sbjct: 269 EVERLLHMVVVGGGPTGVEFAGELQDFFDQDIKKWIPEISDKFKVTLIEALPSVLPTFSK 328
Query: 138 RLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGP 188
+L Y + + + + V+ + + DG + +PYGLLVW+TG
Sbjct: 329 QLIDYTESTFKEEKITIKTKTAVKKVTDTTVEAEATGPDGKKTMEVMPYGLLVWATGNAV 388
Query: 189 STLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQ 242
+VK L +P R G ++E+L V +D++A GDC +GY + AQ
Sbjct: 389 RPIVKDLMASIPAQKDSRRGLAVNEYLVVQGAKDIWATGDCAVAGYAPT---------AQ 439
Query: 243 VAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD--------- 276
VA ++G +L L N + K+ G A AK++E +
Sbjct: 440 VAAQEGAFLARLFNTMAKSEAIESKIHELSSSLNLQPGDAAGIAKEIESHERQLRRVKDI 499
Query: 277 -PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
PF Y H GS+A IG +A+ D+ + + + G L++L WRSAYL+ S RNR V
Sbjct: 500 KPFHYTHQGSLAYIGSERAVADV--SWLNGNFATGGGLTYLFWRSAYLSMCFSTRNRVLV 557
Query: 336 AVNWATTFVFGRDISR 351
++W + FGRD+SR
Sbjct: 558 VLDWLKSKAFGRDVSR 573
>gi|389629700|ref|XP_003712503.1| hypothetical protein MGG_04999 [Magnaporthe oryzae 70-15]
gi|351644835|gb|EHA52696.1| hypothetical protein MGG_04999 [Magnaporthe oryzae 70-15]
Length = 518
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 191/368 (51%), Gaps = 58/368 (15%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR-RKLLLNLMLSDVPGISEEEK 80
+ YDKLV+A+GA + TF I GV+E+A FLR+V A+ IR R L L + P IS+E+K
Sbjct: 172 VPYDKLVVAVGAYSQTFNIDGVREHAHFLRDVGDARRIRLRILALFEHCASNPTISDEQK 231
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRL 139
LLH VVGGGPTG+EF+ EL D I D+ + Y + + +T+ + A +L FD L
Sbjct: 232 RELLHFAVVGGGPTGIEFAAELHDLIYEDLIKVYPGLVPLVRITVYDIAPAVLPMFDKEL 291
Query: 140 RHYATTQLSKSGVRL-----VRGIVKDVDSQKLILND--GTEVPYGLLVWSTGVGPSTLV 192
YA ++ G+ + ++ I + D KL + + EV G++VWSTG+ LV
Sbjct: 292 AGYAMELFNRRGIEIRTEHHLQAIRAEGDGLKLKIKEHGDQEVGAGMVVWSTGLMQHPLV 351
Query: 193 KSL---------DLPKSP--------GGRIGIDEWLRV-----------PSVQDVFAVGD 224
K L P SP G I D +R P + DVF +GD
Sbjct: 352 KKLVDNQVHDQGSNPNSPLRLKSDPKTGAIVTDGHMRAQITENASRGQSPRMDDVFVIGD 411
Query: 225 CSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG 284
C+ + E+ LP QVA +Q YL LN + +++ PF +R+ G
Sbjct: 412 CA-FCEA--DQSLPKTGQVASQQAVYLAKALN------------SGNLDESKPFSFRNWG 456
Query: 285 SMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+MA +G ++A+ +S L G +W++WR+AYLT+ +S RN+ V W +++
Sbjct: 457 TMAYLGGWRAI------HQSSADELKGRAAWVLWRTAYLTKSLSVRNKIIVPFFWFISWL 510
Query: 345 FGRDISRI 352
FGRDISR
Sbjct: 511 FGRDISRF 518
>gi|440474290|gb|ELQ43039.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Magnaporthe oryzae Y34]
gi|440486390|gb|ELQ66263.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Magnaporthe oryzae P131]
Length = 521
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 191/368 (51%), Gaps = 58/368 (15%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR-RKLLLNLMLSDVPGISEEEK 80
+ YDKLV+A+GA + TF I GV+E+A FLR+V A+ IR R L L + P IS+E+K
Sbjct: 175 VPYDKLVVAVGAYSQTFNIDGVREHAHFLRDVGDARRIRLRILALFEHCASNPTISDEQK 234
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRL 139
LLH VVGGGPTG+EF+ EL D I D+ + Y + + +T+ + A +L FD L
Sbjct: 235 RELLHFAVVGGGPTGIEFAAELHDLIYEDLIKVYPGLVPLVRITVYDIAPAVLPMFDKEL 294
Query: 140 RHYATTQLSKSGVRL-----VRGIVKDVDSQKLILND--GTEVPYGLLVWSTGVGPSTLV 192
YA ++ G+ + ++ I + D KL + + EV G++VWSTG+ LV
Sbjct: 295 AGYAMELFNRRGIEIRTEHHLQAIRAEGDGLKLKIKEHGDQEVGAGMVVWSTGLMQHPLV 354
Query: 193 KSL---------DLPKSP--------GGRIGIDEWLRV-----------PSVQDVFAVGD 224
K L P SP G I D +R P + DVF +GD
Sbjct: 355 KKLVDNQVHDQGSNPNSPLRLKSDPKTGAIVTDGHMRAQITENASRGQSPRMDDVFVIGD 414
Query: 225 CSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG 284
C+ + E+ LP QVA +Q YL LN + +++ PF +R+ G
Sbjct: 415 CA-FCEADQS--LPKTGQVASQQAVYLAKALN------------SGNLDESKPFSFRNWG 459
Query: 285 SMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+MA +G ++A+ +S L G +W++WR+AYLT+ +S RN+ V W +++
Sbjct: 460 TMAYLGGWRAI------HQSSADELKGRAAWVLWRTAYLTKSLSVRNKIIVPFFWFISWL 513
Query: 345 FGRDISRI 352
FGRDISR
Sbjct: 514 FGRDISRF 521
>gi|328871032|gb|EGG19404.1| pyridine nucleotide-disulfide oxidoreductase [Dictyostelium
fasciculatum]
Length = 596
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 31/353 (8%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F++ YD+LV+ +GA ++TFGI GV E FL++++ + IR +++ L + PG E+
Sbjct: 254 EFQLPYDQLVMGVGAASATFGIPGVNEFGFFLKDINDTRLIRDRIIDCLETAGYPGQPEK 313
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEILSSFD 136
E RLLH VVVGGGP+GVEF+GEL+DF+ D+ + + H+ D + +TL+EA IL+ FD
Sbjct: 314 EIDRLLHFVVVGGGPSGVEFTGELNDFLREDLSKSFPKHLTDRVRITLVEALPHILTVFD 373
Query: 137 DRLRHYATTQLSKSGVRLV--RGIVKDVDSQKLIL----NDGTEVPYGLLVWSTGVGPST 190
+L + +L S + + V +V + +++ + E+PYG+LVW+ G P
Sbjct: 374 KKLIDHVEKKLQSSPTTKIWTQTAVTNVREKSIVVKGSDKEAREIPYGMLVWAAGNCPRK 433
Query: 191 LVKSLDL---PKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+ L PK R G +DE+ RV ++A+GDC S T + AQVA
Sbjct: 434 ITNDLIASIGPKEQNSRRGLVVDEYFRVKGADGIWAIGDC-----SVTPTPMAPTAQVAS 488
Query: 246 RQGKYLFSL-------LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+ G+YL L LN++ K + + ++ F YRH+G++ +G ++ D
Sbjct: 489 QSGRYLGRLFNDMANELNQVEKKQMSKDELSGLIKKQPLFKYRHMGTLCFVGDATSVFDY 548
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
G + GF ++L+WRSAYL++++S RNR VA +W T +FGRD SR
Sbjct: 549 ------NGTTGEGFAAFLLWRSAYLSKLLSIRNRTMVANDWVKTSLFGRDTSR 595
>gi|358377620|gb|EHK15303.1| hypothetical protein TRIVIDRAFT_38064 [Trichoderma virens Gv29-8]
Length = 517
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 195/396 (49%), Gaps = 75/396 (18%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP------ 73
F + YDKLVIA+GA + TFGI GV+E+A FLR+V A+ IR ++L P
Sbjct: 134 FDVEYDKLVIAVGAYSQTFGIPGVREHAHFLRDVGDARRIRLRVLSLFEQCSYPTSSGDK 193
Query: 74 -------GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI 126
+SEEEK LLH VVVGGGPTG+EF+ EL D I D++ Y + + +T+
Sbjct: 194 NGRIAENALSEEEKRSLLHFVVVGGGPTGIEFAAELHDLIHEDLKAMYPELIPLVRITVY 253
Query: 127 E-ANEILSSFDDRLRHYATTQLSKSG-----------VRLVRGIVKDVD---SQKLILND 171
+ A ++L FD L YA ++ G +R+ G + D S K+
Sbjct: 254 DIAPKVLPMFDQALAQYAMDTFARQGIEVRTEHHLERIRVADGALGDAHGGLSIKIKEYG 313
Query: 172 GTEVPYGLLVWSTGVGPSTLVKSL---------------------DLPKSPG-GRIGIDE 209
E+ GL+VWSTG+ + LV+ L L K P G I D
Sbjct: 314 DDEINAGLVVWSTGLMQNPLVEQLVSKEFAIAKDSALEQDKTSLHRLLKDPKTGGIFTDR 373
Query: 210 WLRV-------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+LR + DV+ +GDC+ +E+ LP AQVA +Q YL LN
Sbjct: 374 YLRARITDGQDTAAGTGDVLPDVYVMGDCA-VIEA--DRSLPKTAQVASQQAGYLAKQLN 430
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
K+ +N PF +R+ G++ +G +KA+ +S L G+++W+
Sbjct: 431 ---KSTQSLSNPTDVSNSWKPFKFRNWGTLTYLGGWKAI------HQSSADELRGWVAWI 481
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VWR AYLTR +S RN+ V V W +++FGRDISR
Sbjct: 482 VWRGAYLTRSMSVRNKLMVPVYWFVSWLFGRDISRF 517
>gi|67517831|ref|XP_658698.1| hypothetical protein AN1094.2 [Aspergillus nidulans FGSC A4]
gi|40747056|gb|EAA66212.1| hypothetical protein AN1094.2 [Aspergillus nidulans FGSC A4]
gi|259488595|tpe|CBF88157.1| TPA: NADH dehydrogenase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 570
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 203/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GVKEN+ FL+EV AQ IR++++ + + SEEE
Sbjct: 205 EVPFDMLVMGVGAENATFGIKGVKENSCFLKEVGDAQRIRKRIMDCVETAMFKDQSEEEI 264
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+R+ +++ VTL+EA +L F +L
Sbjct: 265 KRLLHMVVVGGGPTGVEFAGELQDFFEHDLRKWVPEIQENFRVTLVEALPNVLPMFSKQL 324
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 325 IDYTESTFKEESITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGNAIRP 384
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 385 IVRDLMSQLPAQKNSRRGLAVNEYLVVNGTENVWAVGDCA-------ITNYAPTAQVASQ 437
Query: 247 QGKYLFSLLNRIGKAGG--------GRANSAKDME---------LGD------------P 277
+G +L L N + K A SA E + D P
Sbjct: 438 EGAFLARLFNTMAKTEAIEKELQRLSEAQSAAKSEEERNKIFDEIRDHQRQLRRTKQIGP 497
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR VA+
Sbjct: 498 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVAL 555
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 556 DWVKAKLFGRDVSR 569
>gi|448122124|ref|XP_004204373.1| Piso0_000215 [Millerozyma farinosa CBS 7064]
gi|358349912|emb|CCE73191.1| Piso0_000215 [Millerozyma farinosa CBS 7064]
Length = 584
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 202/377 (53%), Gaps = 39/377 (10%)
Query: 6 ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLL 65
++ E +E ++YD LVI +GA+ STFGI GV ENA F +EV+ + +R++L+
Sbjct: 215 KSTVSETTGVEEITTSLNYDYLVIGVGAQPSTFGIPGVAENALFFKEVNDSVNLRKRLMD 274
Query: 66 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL 125
+ +++ + E+ RLL +V GGGPTGVE +GEL D+I +D+++ V + VTL
Sbjct: 275 MIEAANILPKGDSERKRLLSIIVCGGGPTGVEVAGELQDYIDQDLKKWIPEVASELKVTL 334
Query: 126 IEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-----DGT----E 174
+EA +L+SF+ +L Y + + + L V ++K V + +I + DG+ E
Sbjct: 335 VEALPNVLNSFNKKLVDYTSQVFQDTNIDLRVNTMIKKVSDKTVIASTKSPKDGSTESVE 394
Query: 175 VPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLE 230
+PYG+LVW+TG P L++ L + + R G ++E L V +++A+GDC+
Sbjct: 395 IPYGMLVWATGNAPRGLIRQLSSSIEEQKNARRGLLVNERLLVDGTDNIYALGDCTF--- 451
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRAN----SAKD------------MEL 274
T P AQVA +QG +L R+ + + + S KD E
Sbjct: 452 ----TKYPPTAQVAFQQGAFLGEHFTRLHEVESIKYSIDHPSPKDNVERLQKKFTKLQEK 507
Query: 275 GDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
F Y + GS+A IG +A+ D+ S +S G L++L WRSAY+ +S +N+
Sbjct: 508 MPVFKYYYKGSLAYIGSERAVADMVWGGWSN-VSSGGTLTFLFWRSAYIYMCLSVKNQLL 566
Query: 335 VAVNWATTFVFGRDISR 351
V ++W +FGRD S+
Sbjct: 567 VCLDWIKVSMFGRDCSK 583
>gi|448124470|ref|XP_004204928.1| Piso0_000215 [Millerozyma farinosa CBS 7064]
gi|358249561|emb|CCE72627.1| Piso0_000215 [Millerozyma farinosa CBS 7064]
Length = 584
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 201/377 (53%), Gaps = 39/377 (10%)
Query: 6 ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLL 65
++ E +E ++YD LVI +GA+ STFGI GV ENA F +EV+ + +R++L+
Sbjct: 215 KSTVSETTGVEEITTSLNYDYLVIGVGAQPSTFGIPGVAENALFFKEVNDSVNLRKRLMD 274
Query: 66 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL 125
+ +++ + E+ RLL +V GGGPTGVE +GEL D+I +D+++ V + VTL
Sbjct: 275 MIEAANILPKGDSERKRLLSIIVCGGGPTGVEVAGELQDYIDQDLKKWIPEVASELKVTL 334
Query: 126 IEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-----DGT----E 174
+EA +L+SF+ +L Y + + L V ++K V + +I + DG+ E
Sbjct: 335 VEALPNVLNSFNKKLVDYTHQVFQDTNIDLRVNTMIKKVSDKTVIASTKSPKDGSTETVE 394
Query: 175 VPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLE 230
+PYG+LVW+TG P L++ L + + R G ++E L V +++A+GDC+
Sbjct: 395 IPYGMLVWATGNAPRGLIRQLSSSIEEQKNARRGLLVNERLLVDGTDNIYALGDCTF--- 451
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRAN----SAKD------------MEL 274
T P AQVA +QG +L R+ + + + S KD E
Sbjct: 452 ----TKYPPTAQVAFQQGAFLGEHFTRLHEVESIKYSIDHPSPKDNVERLQKKLTKLQEK 507
Query: 275 GDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
F Y + GS+A IG +A+ D+ S +S G L++L WRSAY+ +S +N+
Sbjct: 508 MPVFKYNYKGSLAYIGSERAVADMVWGDWS-NVSSGGTLTFLFWRSAYIYMCLSVKNQLL 566
Query: 335 VAVNWATTFVFGRDISR 351
V ++W +FGRD S+
Sbjct: 567 VCLDWIKVSMFGRDCSK 583
>gi|451845692|gb|EMD59004.1| hypothetical protein COCSADRAFT_31149 [Cochliobolus sativus ND90Pr]
Length = 576
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 200/378 (52%), Gaps = 54/378 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K ++ +D LV+ +GAE +TFGI GVKEN FL+EV AQ IR +++ + SEE
Sbjct: 209 KTEVPFDMLVVGVGAENATFGIPGVKENGLFLKEVGDAQRIRNRIMDCCETATFKDQSEE 268
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
EK RLLH VVVGGGPTGVEF+GEL DF D+++ ++D VTL+EA +L F
Sbjct: 269 EKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQDNFKVTLVEALPNVLPMFSK 328
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWSTGVG 187
+L Y + + + + +VK+V + K I + T +PYGLLVW+TG
Sbjct: 329 QLIDYTEKTFKEETIDIRTKTMVKNV-TDKYIEAESTGPDGKKQLERIPYGLLVWATGNA 387
Query: 188 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+VK L +P R G ++E+L V ++V+AVGDC+ + + T AQV
Sbjct: 388 LRPIVKDLINQIPAQKDSRRGLAVNEYLVVKGAENVWAVGDCA--VANYAPT-----AQV 440
Query: 244 AERQGKYLFSLLNRIGKAG--------------GGRANSAKDMELGD------------- 276
A ++G +L + N + K A+D G+
Sbjct: 441 AAQEGAFLARMFNNMAKTAEIESQLAELSVAQEKAPGKEARDKVFGEIKALQQRLRRIKS 500
Query: 277 --PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RNR
Sbjct: 501 IGPFEYSHQGSLAYIGSEKAVADI--SWFAGNIASGGTITYIFWRSAYLSMCFSTRNRIL 558
Query: 335 VAVNWATTFVFGRDISRI 352
V ++WA +FGRD+SR+
Sbjct: 559 VMLDWAKAKIFGRDVSRV 576
>gi|448516358|ref|XP_003867549.1| Nde1 NADH dehydrogenase [Candida orthopsilosis Co 90-125]
gi|380351888|emb|CCG22112.1| Nde1 NADH dehydrogenase [Candida orthopsilosis]
Length = 570
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 197/363 (54%), Gaps = 44/363 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV E++TFL+EV A IRR+L+ + +++ S+ E+
Sbjct: 218 LNYDYLVVGVGAQPSTFGIPGVAEHSTFLKEVSDASTIRRRLMDVIEAANILPKSDPERK 277
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GE+ D+I +D+ + ++ + VTL+EA +L+SF+ +L
Sbjct: 278 RLLQIVVCGGGPTGVEAAGEIQDYIDQDLHKWVPELEGELKVTLVEALPNVLNSFNKKLI 337
Query: 141 HYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGP--- 188
Y + + L+ ++K V + L + DG+ E+PYG+L+W+TG
Sbjct: 338 DYTKEVFKDTNINLMTNTMIKKVGDKVLTASQKQPDGSTKTVEIPYGVLIWATGNAARGF 397
Query: 189 -STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L+ +D K+ + +DE+L+V ++FA+GDC+ T P AQVA ++
Sbjct: 398 TRDLMSKIDEQKNAKRGLLVDEYLKVDGTSNIFALGDCTF-------TKYPPTAQVAFQE 450
Query: 248 GKYLFSLLNRIGKA-------------------GGGRANSAKDMELGDPFVYRHLGSMAT 288
G+YL ++ + G A + K++ F Y + GS+A
Sbjct: 451 GEYLAKYFEKLHQVENLQYQIEHPTPKQNVETLGKKLARAEKNLP---KFQYNYQGSLAY 507
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL S ++ G ++L WRSAY+ +S +N+ V ++W +FGRD
Sbjct: 508 IGSEKAVADLVWGDWS-NITSGGNFTFLFWRSAYIYMCLSVKNQCLVILDWMKVSLFGRD 566
Query: 349 ISR 351
S+
Sbjct: 567 CSK 569
>gi|121701619|ref|XP_001269074.1| alternative NADH-dehydrogenase [Aspergillus clavatus NRRL 1]
gi|119397217|gb|EAW07648.1| alternative NADH-dehydrogenase [Aspergillus clavatus NRRL 1]
Length = 570
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 205/377 (54%), Gaps = 58/377 (15%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISE 77
++ +D LV+ +GAE +TFGI GV+EN+ FL+EV AQ+IR++++ M D P E
Sbjct: 205 EVPFDMLVVGVGAENATFGIPGVRENSCFLKEVGDAQKIRKRIMDCVETAMFKDQP---E 261
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F
Sbjct: 262 EEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPEIKDNFHVTLVEALPNVLPMFS 321
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILN-DGTE----VPYGLLVWSTGVG 187
+L Y + + + + + +VK V + + + N DG++ +PYGLLVW+TG
Sbjct: 322 KQLIDYTESTFKEEEITIRTKTMVKKVTDKYIEAEVTNPDGSKNLETIPYGLLVWATGNA 381
Query: 188 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+V+ L +P R G ++E+L V ++++AVGDC+ T AQV
Sbjct: 382 VRNVVRDLMNQIPAQKNSRRGLAVNEYLVVNGAENIWAVGDCA-------VTNYAPTAQV 434
Query: 244 AERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD-------------- 276
A ++G +L L N R+ +A N + ++ D
Sbjct: 435 AGQEGAFLARLFNTMAKTETVEKELQRLSEAQAQAKNEEERNQIFDEIRECQKQLRRNKQ 494
Query: 277 --PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 495 IGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTVTYLFWRSAYLSMCFSTRNRVL 552
Query: 335 VAVNWATTFVFGRDISR 351
VA +W +FGRD+SR
Sbjct: 553 VAADWIKAKLFGRDVSR 569
>gi|242806809|ref|XP_002484822.1| alternative NADH-dehydrogenase [Talaromyces stipitatus ATCC 10500]
gi|218715447|gb|EED14869.1| alternative NADH-dehydrogenase [Talaromyces stipitatus ATCC 10500]
Length = 572
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 201/373 (53%), Gaps = 52/373 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ +D LV+ +GAE +TFGI GV+E++ FL+EV AQ+IR++++ + + +EEE
Sbjct: 208 VPFDMLVVGVGAENATFGIPGVREHSCFLKEVGDAQKIRKRIMDCVETASFKDQTEEEVK 267
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVEF+GEL DF D+R+ ++D HVTL+EA IL F +L
Sbjct: 268 RLLHMVVVGGGPTGVEFAGELQDFFEEDLRKWIPGIQDNFHVTLVEALPNILPMFSKQLI 327
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPSTL 191
Y + + + + + +VK V + ++ DG+ ++PYGLLVW+TG +
Sbjct: 328 EYTESSFKEEKITIRTKTMVKKVTDKYIEAEITKPDGSKELEKIPYGLLVWATGNAVRPV 387
Query: 192 VKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
VK L + R G ++E+L V ++++AVGDC+ T AQVA ++
Sbjct: 388 VKDLMGQISAQQNSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQE 440
Query: 248 GKYLFSLLNRIGKAGGGR---------ANSAKDMELGD--------------------PF 278
G +L L N + K AKD E + PF
Sbjct: 441 GAFLARLFNTMAKTESLEEELKRLSVAQQEAKDEESRNKIFDEIKERQRQLRRTKQIGPF 500
Query: 279 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ V S RNR VA +
Sbjct: 501 QYSHQGSLAYIGKERAVADI--SWVSGNIASGGTMTYLFWRSAYLSMVFSARNRILVATD 558
Query: 339 WATTFVFGRDISR 351
W VFGRD+SR
Sbjct: 559 WIKAKVFGRDVSR 571
>gi|255934090|ref|XP_002558326.1| Pc12g15240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582945|emb|CAP81151.1| Pc12g15240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 578
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 205/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LVI +GAE +TFGI GV+EN+ FL+EV AQ IR++++ + + +E+E
Sbjct: 213 EVPFDMLVIGVGAENATFGIPGVRENSCFLKEVGDAQNIRKRIMDCIETACFKDQTEDEV 272
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F +L
Sbjct: 273 KRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWIPEIKDNFHVTLVEALPNVLPMFSKQL 332
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ DG++ +PYGLLVW+TG
Sbjct: 333 IDYTESTFKEEEISIRTKTMVKNVTDKYIQAEVTKPDGSKELETIPYGLLVWATGNAIRP 392
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V +V+AVGDC+ + + T AQVA +
Sbjct: 393 VVRDLMSQIPAQAESRRGLAVNEYLVVNGTDNVWAVGDCA--IANYAPT-----AQVASQ 445
Query: 247 QGKYLFSLLNRIGKAGG---------GRANSAKDMELGD--------------------P 277
+G +L L N + KA R + AK E + P
Sbjct: 446 EGAFLGRLFNTMAKAEALEKELEALSERQSQAKAAEERNQIFDEIRERQKQLRRNKQIGP 505
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR V V
Sbjct: 506 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVCV 563
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 564 DWVKARLFGRDVSR 577
>gi|58259403|ref|XP_567114.1| NADH dehydrogenase [Cryptococcus neoformans var. neoformans JEC21]
gi|134107485|ref|XP_777627.1| hypothetical protein CNBA7480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260321|gb|EAL22980.1| hypothetical protein CNBA7480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223251|gb|AAW41295.1| NADH dehydrogenase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 565
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 193/360 (53%), Gaps = 39/360 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+G E TFGI GV E A FL+E+ A +IR KL+ + + ++E
Sbjct: 214 IPYDYLVYAVGCENQTFGIKGVPEYACFLKELSDADKIRTKLMDCIETASFKDQPQDEID 273
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RL+H VVVGGGPTGVE++GEL DF++ D+++ Y V D + +TLIEA +L +F +L
Sbjct: 274 RLMHMVVVGGGPTGVEYAGELHDFLIDDLKKWYPEVADRLKITLIEALPNVLPAFSKQLI 333
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L R +VKDV +Q +I+ D E+PYGLLVW+TG + + L
Sbjct: 334 EYTESTFKENKIDVLTRTMVKDVKAQSVIVQDANKEIKEIPYGLLVWATGNTSRNITRDL 393
Query: 196 --DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
L R G +D+ L + V+AVGDC+ T AQVA +QG YL
Sbjct: 394 MTKLSHVQTQRRGLLVDDNLSLLGADGVYAVGDCTA-------TSYAPTAQVASQQGIYL 446
Query: 252 FSLLNRIGKA-------GGGRANSAKDMELGD-------------PFVYRHLGSMATIGR 291
++ ++G+ RA+ D + PF Y H GS+A IG
Sbjct: 447 ANIFQKLGQKTKLEKQLAALRADPTADASEIESLTKKVNRASKITPFHYSHQGSLAYIGS 506
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KA+ DLR + ++ G + L WRSAY++ + S RNR V +W +FGRD+SR
Sbjct: 507 EKAIADLRLF--NGNVASGGSAAMLFWRSAYVSTLYSVRNRTLVLTDWLKVKLFGRDVSR 564
>gi|121701091|ref|XP_001268810.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus clavatus NRRL 1]
gi|119396953|gb|EAW07384.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus clavatus NRRL 1]
Length = 569
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 192/394 (48%), Gaps = 78/394 (19%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F+I YDKLV+A+GA + TFG GV+ENA F +++ A+ ++R++ L+ +P + E
Sbjct: 191 FEIPYDKLVVAVGAVSRTFGTPGVRENAMFFKDIGDARRVKRRVRECFELAVLPTTTREM 250
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ +LLH +VG GPTG E + L DFI RD+ Y + +TL + A +LS FD+
Sbjct: 251 RDQLLHFAIVGAGPTGTELAASLRDFIYRDMITLYPQLHGVPRITLYDVAPTVLSMFDET 310
Query: 139 LRHYATTQLSKSGVRLVRG--------------IVKDVDSQK---LILNDGTEVPYGLLV 181
L YA + K G+ + ++D ++ L + EV G+ V
Sbjct: 311 LSQYAMETMQKEGIAIKTSHHVESLRWGPPGAQPPYEMDPKRCLTLKTKEEGEVGVGMCV 370
Query: 182 WSTG----------------VGPSTLVKSLDLPKSP---------------GGRIGIDEW 210
W TG + S +VK D +P G + +D
Sbjct: 371 WVTGNAMNKFVRNALQDVKALPASAVVKDADTNTNPSNSDSSNAWHVKKAKNGALLVDGQ 430
Query: 211 LRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA 261
LRV +QDVFA+GD S + TG PA AQ ++ K+L LN+
Sbjct: 431 LRVQLQSDDGRTAVLQDVFALGDNS--MPETGAP--PATAQATFQEAKWLAMHLNQ---- 482
Query: 262 GGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL--RQNKESKGLS--LAGFLSWLV 317
D++ PF +R+LG++A +G +AL+ L K+SK L L G ++W+V
Sbjct: 483 --------GDLQQSGPFSFRNLGTLAYLGNARALMQLPHENGKQSKYLPTGLTGRMAWIV 534
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
W SAYLT +SWRNR VA W VFGRD+SR
Sbjct: 535 WNSAYLTMSISWRNRLRVAFRWLLNNVFGRDVSR 568
>gi|390596084|gb|EIN05487.1| NADH dehydrogenase [Punctularia strigosozonata HHB-11173 SS5]
Length = 585
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 195/404 (48%), Gaps = 84/404 (20%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I+YD LV A+GAE TF I GVKE+A F++E+H A++ + + + + + PG +E EK
Sbjct: 191 INYDYLVYAVGAETQTFNIPGVKEHACFMKELHDAEKAQDRFIDCIESAAFPGQTEAEKD 250
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH +VVGGGPTGVE SGEL DF++ D+R Y + + ++LIEA +L +F +L
Sbjct: 251 RLLHMIVVGGGPTGVELSGELHDFLVEDLRNWYPDLAPRMKISLIEALPSVLPTFSKQLI 310
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L + +VK++ + +++ +GT E+P G++VW+ G P + L
Sbjct: 311 DYTVSTFKEANIDVLTKTMVKEIRERSVVVKTPEGTDEEIPCGVVVWAGGNKPRKVSTDL 370
Query: 196 DLPKSPGGRIGID----------------------------------------------E 209
+ K P + + +
Sbjct: 371 -MAKFPEAQTNRNHEPASATREILRGGGGGGGGGGGIEGKGKEEGATKDAPSTTIPRYLD 429
Query: 210 WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRAN-- 267
LR+ +FA+GDC+ T AQVA ++G YL +L ++ K A
Sbjct: 430 QLRMKGTDGIFAIGDCTS-------TSYAPTAQVASQEGAYLARVLAQVAKRDQALAELQ 482
Query: 268 --------------------SAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
A+ +E PF Y H GS+A IG +A+ DL + +
Sbjct: 483 KLEATATAPEAEKEKEKLKRQAEKLEKIRPFHYSHQGSLAYIGSDRAIADL--SVWQRTF 540
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
S G ++L WRS YL+ + S RNR VA +W +FGRD+SR
Sbjct: 541 SSGGAWTYLFWRSVYLSTLFSLRNRTLVATDWLKVKLFGRDVSR 584
>gi|367050222|ref|XP_003655490.1| hypothetical protein THITE_2119240 [Thielavia terrestris NRRL 8126]
gi|347002754|gb|AEO69154.1| hypothetical protein THITE_2119240 [Thielavia terrestris NRRL 8126]
Length = 583
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 202/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LVI +GAE +TFGI GV+E++ FL+E+ AQ+IR++++ + + S EE
Sbjct: 220 EVPYDMLVIGVGAENATFGIPGVREHSCFLKEIGDAQKIRKRIMDCVETAAFKDQSPEEI 279
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L F +L
Sbjct: 280 DRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISDRFRVTLIEALPSVLPMFSKQL 339
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + ++ DGT+ PYGLLVW+TG
Sbjct: 340 IEYTESTFKEEKINIHTKTMVKKVTDKTVEAEVTRPDGTKETVVFPYGLLVWATGNAVRP 399
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 400 VVKDLMARIPAQKNSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 450
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + K G A ++++E + P
Sbjct: 451 SQEGNFLARLFNNMAKTEALESKIRELSSSLNLQPGNSAAISREIEEHERQLRRIKDIKP 510
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + ++ AG L++L WRSAY++ S RNR V
Sbjct: 511 FYYSHQGSLAYIGSEKAVADVTWF--NGNVAAAGSLTFLFWRSAYISMCFSMRNRLLVIN 568
Query: 338 NWATTFVFGRDISR 351
+W + VFGRD+SR
Sbjct: 569 DWLKSKVFGRDLSR 582
>gi|430813884|emb|CCJ28803.1| unnamed protein product [Pneumocystis jirovecii]
Length = 495
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 191/373 (51%), Gaps = 57/373 (15%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LVI +GAE TFGI GV + A FL+E A++IR K++ + + G +++EK
Sbjct: 137 LSYDYLVIGVGAENQTFGISGVNQYANFLKETSDARKIRIKIMECIKAALFEGQTDDEKQ 196
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL+ +VVGGGPTGVEF+ EL DF D+++ + + + V LIE +L F L
Sbjct: 197 RLLNMIVVGGGPTGVEFAAELHDFFEADLKKWFPEISNIFKVKLIEMLPSVLPMFPKTLI 256
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPSTL 191
+Y + L R IVK V + +I+ D + +PYGLLVW+TG P +
Sbjct: 257 NYTEAAFKGQNIEILTRSIVKGVTDKYIIVETVAPDNKKMIQRIPYGLLVWATGNSPRNV 316
Query: 192 VKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+K L +P+ G G ++++L V ++++A+GDC+ T AQVA +Q
Sbjct: 317 IKDLVSKIPEQNGSFRGLLVNDYLVVKGTENIWALGDCTA-------TKYAPTAQVASQQ 369
Query: 248 GKYLFSLLNRIGKAGGGRAN---------------SAKDMELGD--------------PF 278
G+YL L + + + + K+M D PF
Sbjct: 370 GEYLAKLFDTLAEFRKVKKEIRYLEKLLETDSINFENKEMIKKDVNIKIKKMERLSILPF 429
Query: 279 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
+ + GS+A IG KA+ DL +K S S+ G +++L WRS Y + RNR V ++
Sbjct: 430 EFLYRGSLAYIGNDKAIADLSFSKGS--FSMFGTVAFLFWRSVY-----AIRNRVLVCLD 482
Query: 339 WATTFVFGRDISR 351
W +FGRD+ R
Sbjct: 483 WIKVSIFGRDVKR 495
>gi|189207893|ref|XP_001940280.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976373|gb|EDU42999.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 577
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 201/378 (53%), Gaps = 54/378 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K ++ +D LV+ +GAE +TFGI GVKEN FL+EV AQ IR +++ + SEE
Sbjct: 210 KTEVPFDMLVVGVGAENATFGIPGVKENGLFLKEVGDAQRIRNRIMDCCETATFKDQSEE 269
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
EK RLLH VVVGGGPTGVEF+GEL DF D+++ ++D VTL+EA +L F
Sbjct: 270 EKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQDNFKVTLVEALPNVLPMFSK 329
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWSTGVG 187
+L Y + + + + +VK+V ++K I + T ++PYGLLVW+TG
Sbjct: 330 QLIDYTEKTFKEETITIRTKTMVKNV-TEKFIEAESTGPDGKKQLEKIPYGLLVWATGNA 388
Query: 188 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+VK L +P R G ++E+L V ++V+AVGDC+ + + T AQV
Sbjct: 389 LRPIVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----AQV 441
Query: 244 AERQGKYLFSLLNRIGKAG--------------GGRANSAKDMELGD------------- 276
A ++G +L + N + K A+D +
Sbjct: 442 AAQEGAFLARMFNNMAKTSEIESELKQLSIAQETAPGKEARDKVFNEIKALQQRLRRIKQ 501
Query: 277 --PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RNR
Sbjct: 502 IGPFEYSHQGSLAYIGSEKAVADV--SWFAGNIASGGTITYIFWRSAYLSMCFSTRNRIL 559
Query: 335 VAVNWATTFVFGRDISRI 352
V ++WA +FGRD+SR+
Sbjct: 560 VMLDWAKAKIFGRDVSRV 577
>gi|395329228|gb|EJF61616.1| NADH dehydrogenase [Dichomitus squalens LYAD-421 SS1]
Length = 553
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/361 (37%), Positives = 196/361 (54%), Gaps = 40/361 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TF I GV+E+A F++E+ A++++R+ + + + PG + +E
Sbjct: 201 IPYDYLVFAVGAEVQTFNIPGVREHACFMKELEDAEKMQRRFMDCMESAAFPGQTSDEVK 260
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF+ D+R Y + + + +TL+EA +L SF +L
Sbjct: 261 RLLHMVVVGGGPTGVELSGELHDFLEEDLRSWYPELAESVRITLVEALPSVLPSFSKQLI 320
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L + +VK+V + ++L EVP GL+VW+ G + + L
Sbjct: 321 DYTESTFKEAKIDILTKTMVKEVKEKSVVLQMPDKSIVEVPCGLVVWAAGNTLRKVTRDL 380
Query: 196 --DLPKSPGGRIGI--DEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
LP++ R GI DE +R+ +FAVGDC T T P AQVA +QG Y
Sbjct: 381 MAKLPEAQNNRRGITVDECMRMAGTDGSIFAVGDC------TATTYAPT-AQVASQQGAY 433
Query: 251 LFSLLNRIGKAGG-----GRANSAKDMELGD---------------PFVYRHLGSMATIG 290
L +L ++ K ++A + E + PF Y H GS+A IG
Sbjct: 434 LARVLGQLAKRDNLEYRLKELDAAPEAEKQEREQAEKRLAKLEKLRPFKYSHQGSLAYIG 493
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA+ DL + L+ G ++L WRSAYL+ + S RNR VA +W FGRD+S
Sbjct: 494 SDKAIADL--PFFNGNLATGGVATFLFWRSAYLSTLFSMRNRTLVATDWLKVKFFGRDVS 551
Query: 351 R 351
R
Sbjct: 552 R 552
>gi|367016783|ref|XP_003682890.1| hypothetical protein TDEL_0G03120 [Torulaspora delbrueckii]
gi|359750553|emb|CCE93679.1| hypothetical protein TDEL_0G03120 [Torulaspora delbrueckii]
Length = 538
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 204/356 (57%), Gaps = 31/356 (8%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
++ + YD LV +GA+ +TFGI GV EN++FL+E+ AQEIR K++ ++ + ++
Sbjct: 190 YQLDMKYDYLVNGVGAQPTTFGIPGVVENSSFLKEISDAQEIRMKIMTSIEKAASLAPTD 249
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E+SRLL VVVGGGPTGVEF+ EL D++ +D+ + + I+VTL+EA IL+ FD
Sbjct: 250 PERSRLLSFVVVGGGPTGVEFAAELRDYVDQDLAKWMPELSKEINVTLVEALPNILNMFD 309
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL---NDGTEVPYGLLVWSTGVGPSTLV 192
L YA + + L ++ +VK+VD + +D T+VPYG+LVW+TG P +
Sbjct: 310 KSLVDYAQDLFKQDRIDLKLKTMVKNVDKTHITAKCGDDLTKVPYGVLVWATGNAPREVS 369
Query: 193 KSL-DLPKSPGGRIG--IDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
K+L + + R G IDE L++ Q +FA+GDC+ Y + P AQVA ++G
Sbjct: 370 KNLMEKLEEQNSRRGLLIDEKLQLIGAQGSIFALGDCTFY-----PGLFPT-AQVAHQEG 423
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELG--------------DPFVYRHLGSMATIGRYKA 294
+YL + ++ K + A+D PF Y H+G++A IG KA
Sbjct: 424 EYLAKVFKKLHKIDQTKWELAQDNTNDPKAQSKLNRLESQIQPFHYEHMGALAYIGSEKA 483
Query: 295 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+ DL ESK S AG ++L W+SAYL +S+RNR +A++W + GRD S
Sbjct: 484 IADLAVG-ESKYRS-AGSFTFLFWKSAYLAMCMSFRNRILIAMDWTKVYFLGRDSS 537
>gi|392586618|gb|EIW75954.1| NADH dehydrogenase [Coniophora puteana RWD-64-598 SS2]
Length = 520
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 196/376 (52%), Gaps = 58/376 (15%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TFGI GVKE+A F++E+H A+ ++R+ L + + PG ++EEK
Sbjct: 156 IPYDYLVYAVGAETQTFGIPGVKEHALFMKEIHDAERMQRRFLDCIESAAFPGQTDEEKD 215
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGE+ D++ D+R Y + I +TL+EA +L F L
Sbjct: 216 RLLHIVVVGGGPTGVELSGEVHDWLEEDLRSWYPELAPRIRITLVEALPSVLPMFSKELI 275
Query: 141 HYATTQLSKSGVRLVRG-IVKDVDSQKLILN-----------DGTEVPYGLLVWSTGVGP 188
Y + +S + ++ G +VK V + L +VP G++VW+ G
Sbjct: 276 QYTESTFRESKIDVLTGTMVKGVTESSVRLKLGKEGDGKGEGREVDVPCGVVVWAAGNTA 335
Query: 189 STLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
+ K L LP + R I ID++LR+ +D FA+GDC T + P AQVA
Sbjct: 336 RQISKDLMAQLPDAQTNRRGIAIDDYLRLAGARDAFAIGDC------TASSYAPT-AQVA 388
Query: 245 ERQGKYLFSLLNRIGK---------------AGGGRANSAKDMELG-----------DPF 278
+QG YL L ++ K GG +A D E PF
Sbjct: 389 SQQGAYLARLFKQLAKRDAIEARIAAVQGEGEGGESKVAAVDEEEKKLRKQLDRVKLKPF 448
Query: 279 VYRHLGSMATIGRYKALVDLR---QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
Y H GS+A IG KA+ DL +N S G++ ++L WRSAYL+ + S RNR V
Sbjct: 449 QYSHQGSLAYIGSDKAIADLPIFGRNWASGGVA-----TYLFWRSAYLSTLFSLRNRTLV 503
Query: 336 AVNWATTFVFGRDISR 351
A +W +FGRD SR
Sbjct: 504 ASDWLRVKLFGRDTSR 519
>gi|149246484|ref|XP_001527696.1| hypothetical protein LELG_00216 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447650|gb|EDK42038.1| hypothetical protein LELG_00216 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 570
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 192/355 (54%), Gaps = 33/355 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+ +GA+ STFG+ GV E++TF++E+ + IRR L+ + +++ + E+
Sbjct: 223 IPYDYLVVGIGAQPSTFGLPGVAEHSTFVKEISDSARIRRTLIDLVEAANILPEGDPERK 282
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLR 140
RLLH +V GGGPTGVE +GE+ D+I +D+++ V + VTL+E+ ++L +F+ +L
Sbjct: 283 RLLHVIVCGGGPTGVEAAGEIQDYIDQDLKKWVPDVAKDLKVTLVESQPKVLHTFNPKLV 342
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLIL----NDGTE-VPYGLLVWSTGVG----PST 190
Y ++ + LV + VD + + TE +PYG+L+W+TG
Sbjct: 343 EYTNQIFKETNINLVTDTRITHVDDHYVTAFHKSSKQTEIIPYGMLIWATGNATRDFTHV 402
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
L+ +D KS ID+ L++ +++FA+GDC+ + P AQVA ++G+Y
Sbjct: 403 LMSKIDAQKSAKRGFLIDDNLKLKGSKNIFALGDCTF-------SKYPPTAQVAFQEGQY 455
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGD--------------PFVYRHLGSMATIGRYKALV 296
L ++ K + A D + + F+Y + GS+A IG KA+
Sbjct: 456 LAKYFEKLQKLESLKYRIANDPDASEFLKQRADRLEGNLPKFIYNYQGSLAYIGSEKAVA 515
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
DL S +S G +++L WRSAY+ +S +N+ V V+W +FGR+ SR
Sbjct: 516 DLAWGSWS-NVSTGGNMTFLFWRSAYIYMCLSVKNQILVCVDWLKVSLFGRECSR 569
>gi|425768231|gb|EKV06761.1| Alternative NADH-dehydrogenase [Penicillium digitatum Pd1]
gi|425770401|gb|EKV08874.1| Alternative NADH-dehydrogenase [Penicillium digitatum PHI26]
Length = 567
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 207/375 (55%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LVI +GAE +TFGI GV+EN+ FL+EV AQ IR++++ + + +E+E
Sbjct: 202 EVPFDMLVIGVGAENATFGIPGVRENSCFLKEVGDAQNIRKRIMDCIETACFKDQTEDEV 261
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F +L
Sbjct: 262 KRLLHMVVVGGGPTGVEFAGELKDFFNDDLKKWIPEIKDNFHVTLVEALPNVLPMFSKQL 321
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + ++ DG++ +PYGLLVW+TG
Sbjct: 322 IEYTESTFKEEEISIRTKTMVKKVTDKYIQAEVTKPDGSKELETIPYGLLVWATGNAIRG 381
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++V+AVGDC+ + + T AQVA +
Sbjct: 382 VVRDLMSQIPAQAESRRGLAVNEYLVVNGTENVWAVGDCA--IANYAPT-----AQVASQ 434
Query: 247 QGKYLFSLLNRIGKAGG---------GRANSAK---------------------DMELGD 276
+G +L L N + KA R + AK + ++G
Sbjct: 435 EGAFLGRLFNTMAKAEALEQELEILSDRQSQAKGDEERNQIFDEIRERQKQLRRNKQIG- 493
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR V
Sbjct: 494 PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVC 551
Query: 337 VNWATTFVFGRDISR 351
V+W +FGRD+SR
Sbjct: 552 VDWVKARLFGRDVSR 566
>gi|380494412|emb|CCF33169.1| hypothetical protein CH063_05416 [Colletotrichum higginsianum]
Length = 583
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 200/374 (53%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LV+ +GAE +TFGI GV+EN+ FL+E+ AQ IR+K++ + + S E+
Sbjct: 220 EVAYDMLVVGVGAENATFGIPGVRENSCFLKEIGDAQAIRKKIMDCVETAAFKDQSAEDV 279
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
SRL+H VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 280 SRLMHMVVVGGGPTGVEFAGELQDFFEEDIKRLVPEIADRFKVTLIEALPNVLPSFSKQL 339
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPST 190
Y + + L + +VK+V + DG + +PYGLLVW+TG
Sbjct: 340 IEYTEKTFKEEKIDILTKTMVKNVTDTHVQAEATGPDGKKQTLIIPYGLLVWATGNAVRP 399
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+++ L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 400 IIRDLISKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 450
Query: 245 ERQGKYLFSLLNRIGKAGGGRA---NSAKDMELG------------------------DP 277
++G +L L N + + A +KD+ L P
Sbjct: 451 AQEGSFLARLFNNMARTETVEARIQELSKDLNLKPGNAAEAAKEIEAHERQLRRIKDIKP 510
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GSMA IG KA+ D+ + + ++ G +++L WRSAYL+ S RNR V
Sbjct: 511 FHYSHQGSMAYIGSEKAVADV--SWWNGNIASGGSMTYLFWRSAYLSMCFSTRNRLLVVN 568
Query: 338 NWATTFVFGRDISR 351
+W + VFGRDISR
Sbjct: 569 DWLKSKVFGRDISR 582
>gi|328769598|gb|EGF79641.1| hypothetical protein BATDEDRAFT_16765 [Batrachochytrium
dendrobatidis JAM81]
Length = 519
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 197/371 (53%), Gaps = 51/371 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K I YD LV+A GAE +TFGI GV+E+A FL+E A++IR +L+ L + PG ++E
Sbjct: 161 KQTIPYDYLVVACGAENATFGIPGVREHACFLKEAWDAKKIRTRLMDCLETAAFPGQTDE 220
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDD 137
E RLLH VVVGGGPTGVE++ EL DF+ D+ Y + +TL+EA+ +L F
Sbjct: 221 EIRRLLHMVVVGGGPTGVEYAAELYDFLHEDLLTWYPDLAGKFKITLVEASPHVLPMFSK 280
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE----VPYGLLVWSTGVGPSTLV 192
+L Y + + V ++ VK V+ + + + D + +PYGL+VW+TG +V
Sbjct: 281 QLIEYTEHHFAANKVTILNNTSVKQVNQRDIQVMDAEKNLNTIPYGLIVWATGNTARPIV 340
Query: 193 KSL--DLPKSPGGR---IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+ L LP + + +D++L + D+F +GD + T AQVA RQ
Sbjct: 341 QDLIKKLPSDVQNQRRGLVVDDFLAIKGATDMFGLGDATA-------TKWAPTAQVASRQ 393
Query: 248 GKYLFSLLNRIGKAGGGRAN---------SAKD------------------MELGDPFVY 280
G+YL ++ N +G+ + N +A D M G PF Y
Sbjct: 394 GRYLANMFNHMGELDTAKTNPKESSLALTNATDPAYKTPNTSATTTLHQALMACG-PFQY 452
Query: 281 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 340
HLGS+A IG+ A+ + G+++ G ++ WRSAYL+ + S RNR VA +WA
Sbjct: 453 DHLGSLAYIGKDHAIAEF-----PFGVTVGGAATYFFWRSAYLSTLFSLRNRVLVAFDWA 507
Query: 341 TTFVFGRDISR 351
FGRDISR
Sbjct: 508 KKKCFGRDISR 518
>gi|290979469|ref|XP_002672456.1| predicted protein [Naegleria gruberi]
gi|284086033|gb|EFC39712.1| predicted protein [Naegleria gruberi]
Length = 491
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 190/337 (56%), Gaps = 34/337 (10%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLV+A+G + + FGI GVK+ L+E+ HA+ IR+++ + P
Sbjct: 183 FTLPYDKLVVAVGCDVNDFGIKGVKDYTFPLKEISHARTIRQQITQCFERASNPSTPVHL 242
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEILSSFDD 137
+ LLH V+VG G TGVEF+ E D I RD+ + + + + + +T+IEA + +LS+FD
Sbjct: 243 RETLLHFVIVGAGATGVEFAAECHDLI-RDLSRNFPPEIMEEVSMTVIEAGSTVLSAFDS 301
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDS-QKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
L+ Y ++ +++ VK+V S L L DG+ + G++VWS + +
Sbjct: 302 SLQKYTQKFFRRNHIKIRTNQQVKEVLSPNSLKLQDGSIIECGMIVWSAEIS-----QGR 356
Query: 196 DLPKSPG-GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
LP P +I +D+ L V +++A+GD S +E+ L A AQVA++QG Y+
Sbjct: 357 QLPIDPKTKKIIVDDHLHVKGFDNIWALGDIS-LIETVP---LAATAQVAQQQGLYVARH 412
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
LN ++E PFVY H+G +A IG Y+A+ + K GFLS
Sbjct: 413 LN-------------GEIEESKPFVYHHMGQLAYIGNYRAISQVGAVKS------GGFLS 453
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
WL WRSAY+TR+VS RN+F V +NW +TF FGRDISR
Sbjct: 454 WLFWRSAYMTRLVSIRNKFNVLLNWTSTFWFGRDISR 490
>gi|321250435|ref|XP_003191806.1| NADH dehydrogenase [Cryptococcus gattii WM276]
gi|317458273|gb|ADV20019.1| NADH dehydrogenase, putative [Cryptococcus gattii WM276]
Length = 565
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 193/360 (53%), Gaps = 39/360 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+G E TFGI GV E A FL+E+ A +IR K++ + + ++E
Sbjct: 214 IPYDYLVYAVGCENQTFGIKGVPEYACFLKELSDADKIRTKVMDCIETAAFKDQPQDEID 273
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RL+H VVVGGGPTGVE++GEL DF++ D+++ Y + D + +TLIEA +L +F +L
Sbjct: 274 RLMHMVVVGGGPTGVEYAGELHDFLIDDLKKWYPEIADRLKITLIEALPNVLPAFSKQLI 333
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L R +VKDV Q +++ D E+PYGLLVW+TG + + L
Sbjct: 334 EYTESTFKENKIDVLTRTMVKDVKPQSVVVQDANKEIREIPYGLLVWATGNTSRNITRDL 393
Query: 196 --DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
L R G +D+ L + + V+AVGDC+ T AQVA +QG YL
Sbjct: 394 MTKLSHVQTQRRGLLVDDNLALLGAEGVYAVGDCTA-------TSYAPTAQVASQQGIYL 446
Query: 252 FSLLNRIGKAG-------GGRANSAKDMELGD-------------PFVYRHLGSMATIGR 291
S+ ++G+ RA+ D + PF Y H GS+A IG
Sbjct: 447 ASIFQKLGQKAKLEKQLAALRADPTADASEIESLTKKVNRASKITPFHYSHQGSLAYIGS 506
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KA+ DLR + ++ G + L WRSAY++ + S RNR V +W +FGRD+SR
Sbjct: 507 EKAIADLRLF--NGNVASGGSAAMLFWRSAYVSTLYSVRNRTLVLTDWVKVKLFGRDVSR 564
>gi|367027590|ref|XP_003663079.1| hypothetical protein MYCTH_2304512 [Myceliophthora thermophila ATCC
42464]
gi|347010348|gb|AEO57834.1| hypothetical protein MYCTH_2304512 [Myceliophthora thermophila ATCC
42464]
Length = 581
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 203/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE +TFGI GV+E++ FL+E+ AQ+IR++++ + + S EE
Sbjct: 218 EVPYDMLVVGVGAENATFGIPGVREHSCFLKEIGDAQKIRKRIMDCVETAAFKDQSPEEI 277
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L F +L
Sbjct: 278 DRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISDRFRVTLIEALPNVLPMFSKQL 337
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + ++ DG + PYGLLVW+TG
Sbjct: 338 IEYTESTFKEEKINIHTKTVVKKVTDKTVEAEVTRPDGKKETVVFPYGLLVWATGNAVRP 397
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P G R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 398 VVRDLMSRIPAQAGSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 448
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDME--------LGD--P 277
++G +L L N + K G A ++++E L D P
Sbjct: 449 SQEGTFLARLFNNMAKTEALEARIRELSSSLNLRPGNSAEISREIEQHERQLRRLKDIKP 508
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + L+ AG L++L WRSAY++ S RNR V
Sbjct: 509 FHYSHQGSLAYIGSEKAVADV--TWFNGNLAAAGSLTFLFWRSAYISMCFSTRNRLLVIN 566
Query: 338 NWATTFVFGRDISR 351
+W + VFGRD+SR
Sbjct: 567 DWLKSKVFGRDLSR 580
>gi|330921115|ref|XP_003299290.1| hypothetical protein PTT_10249 [Pyrenophora teres f. teres 0-1]
gi|311327092|gb|EFQ92606.1| hypothetical protein PTT_10249 [Pyrenophora teres f. teres 0-1]
Length = 577
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 199/376 (52%), Gaps = 54/376 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GVKEN FL+EV AQ IR +++ + SEEEK
Sbjct: 212 EVPFDMLVVGVGAENATFGIPGVKENGLFLKEVGDAQRIRNRIMDCCETATFKDQSEEEK 271
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ ++D VTL+EA +L F +L
Sbjct: 272 KRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQDNFKVTLVEALPNVLPMFSKQL 331
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWSTGVGPS 189
Y + + + + +VK+V S K I + T ++PYGLLVW+TG
Sbjct: 332 IDYTEKTFKEETITIRTKTMVKNVTS-KFIEAESTGPDGKKQLEKIPYGLLVWATGNALR 390
Query: 190 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+VK L +P R G ++E+L V ++V+AVGDC+ + + T AQVA
Sbjct: 391 PIVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----AQVAA 443
Query: 246 RQGKYLFSLLNRIGKAG--------------GGRANSAKDMELGD--------------- 276
++G +L + N + K A+D +
Sbjct: 444 QEGAFLARMFNNMAKTSEIESELKELSIAQETAPGKEARDKVFNEIKALQQRLRRIKQIG 503
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RNR V
Sbjct: 504 PFEYSHQGSLAYIGSEKAVADV--SWFAGNIASGGTITYIFWRSAYLSMCFSTRNRILVM 561
Query: 337 VNWATTFVFGRDISRI 352
++WA +FGRD+SR+
Sbjct: 562 LDWAKAKIFGRDVSRV 577
>gi|154286926|ref|XP_001544258.1| hypothetical protein HCAG_01305 [Ajellomyces capsulatus NAm1]
gi|150407899|gb|EDN03440.1| hypothetical protein HCAG_01305 [Ajellomyces capsulatus NAm1]
Length = 651
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 202/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE +TFGI GV+E++ FL+EV AQEIR++++ + + ++EE
Sbjct: 286 EVPYDMLVVGVGAENATFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTKEEV 345
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+R+ +KD VTL+EA +L +F +L
Sbjct: 346 ERLLHMVVVGGGPTGVEFAGELQDFFNDDLRKWVPEIKDSFKVTLVEALPNVLPTFSKQL 405
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + ++ DGT+ +PYGLLVW+TG
Sbjct: 406 IDYTESTFQEEAITIRTKTMVKKVSDKYIEAEVTKPDGTKELETIPYGLLVWATGNAVRG 465
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 466 VVRDLMSQIPAQSKSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTAQVASQ 518
Query: 247 QGKYLFSLLNRIGKAGG----------GRANSAKDMELGD-------------------P 277
+G +L L N + K +A++ D E P
Sbjct: 519 EGSFLARLFNSMAKTEAIEAELKELSTAQASAPSDEERNKILDRIRALQKSLRRTKQLGP 578
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR VA
Sbjct: 579 FQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNRVLVAF 636
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 637 DWLKAKMFGRDVSR 650
>gi|254566619|ref|XP_002490420.1| Mitochondrial external NADH dehydrogenase, a type II
NAD(P)H:quinone oxidoreductase [Komagataella pastoris
GS115]
gi|238030216|emb|CAY68139.1| Mitochondrial external NADH dehydrogenase, a type II
NAD(P)H:quinone oxidoreductase [Komagataella pastoris
GS115]
gi|328350814|emb|CCA37214.1| NADH dehydrogenase [Komagataella pastoris CBS 7435]
Length = 569
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 187/366 (51%), Gaps = 38/366 (10%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
+P I YD LV A+GA+ +TFGI G+++ A +L+E A IRR L + S +
Sbjct: 211 KPIVATIEYDYLVFAIGAQTATFGIPGIEKYAYYLKETDDAARIRRSLFETIEASQLLPK 270
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 134
EE+ RLL VV GGGPTGVE + E+ D+I D+ + +++ + VTL+EA +L++
Sbjct: 271 DSEERKRLLSVVVCGGGPTGVELAAEIKDYIDEDLSRFVPGIENEMSVTLVEALPNVLNA 330
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL--------NDGTEVPYGLLVWSTG 185
F+ +L Y + K + L V +VK VD + + + +PYG LVW+TG
Sbjct: 331 FNHKLIEYTESIFEKQQLDLRVNTMVKKVDDKNVYATVKKSGGDTENVTIPYGTLVWATG 390
Query: 186 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
GP L K++ + + R G I E L V VFA+GDC+ T P A
Sbjct: 391 NGPRPLTKAVAAQIEEQKTARRGLLIGEHLLVDGTDSVFALGDCTF-------TKNPPTA 443
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----------------PFVYRHLGS 285
QVA ++G YL S L ++ K + ++ + PF Y H G+
Sbjct: 444 QVAHQEGIYLASHLAKLSKIDDLKYEIGQNTDPEQLVRLQRRLDRTQASILPFKYTHQGA 503
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG +A+ DL S +S G L++L WRSAY++ ++ R + V +W VF
Sbjct: 504 LAYIGSERAVADLVWGDWS-NVSTGGSLTFLFWRSAYVSMMLGVRTKILVVSDWIKVKVF 562
Query: 346 GRDISR 351
GRD S+
Sbjct: 563 GRDCSK 568
>gi|378726810|gb|EHY53269.1| NADH dehydrogenase [Exophiala dermatitidis NIH/UT8656]
Length = 589
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 201/373 (53%), Gaps = 51/373 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I +D LV+ +GAE +TFGI GV+E+A FL+EV AQ+IR++++ + + EE
Sbjct: 225 EIPFDMLVVGVGAENATFGIPGVREHACFLKEVGDAQKIRKRIMDCVETATFKDQPPEEV 284
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+ + +KD HVTL+EA +L F +L
Sbjct: 285 KRLLHMVVVGGGPTGVEFAGELQDFFQEDLLKWVPQIKDDFHVTLVEALPNLLPMFSKQL 344
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ DGT ++PYGLLVW+TG
Sbjct: 345 IEYTESSFKEEHIEIRTKTMVKNVTDKYIEAEVQQPDGTKQIEKIPYGLLVWATGNALRP 404
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+VK L +P R G ++E+L V ++++AVGDC+ + + T AQVA +
Sbjct: 405 VVKDLMSQIPAQAKARRGLEVNEYLVVNGTENIWAVGDCA--VANYAPT-----AQVAAQ 457
Query: 247 QGKYLFSLLNRIGKAGGGRAN----SAKD-MELGD-----------------------PF 278
+G +L L N + K A SAK GD PF
Sbjct: 458 EGAFLARLFNTMAKTDAIEAELRELSAKQAAATGDERNAILNEIRERQRQLRRIKQIGPF 517
Query: 279 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
Y H GS+A IG KA+ D+ + S ++ G L++L W+SAYL+ S RNR VA +
Sbjct: 518 QYSHQGSLAYIGAEKAVADV--SWFSGNIASGGTLTYLFWKSAYLSMCFSARNRILVAFD 575
Query: 339 WATTFVFGRDISR 351
W FGRD+SR
Sbjct: 576 WTKAKFFGRDVSR 588
>gi|156058358|ref|XP_001595102.1| hypothetical protein SS1G_03190 [Sclerotinia sclerotiorum 1980]
gi|154700978|gb|EDO00717.1| hypothetical protein SS1G_03190 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 571
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 201/374 (53%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++SYD LV+++GAE +TFGI GV+E++ FL+E+ AQ IR+K++ + + S EE
Sbjct: 208 EVSYDMLVVSVGAENATFGIPGVREHSCFLKEIGDAQAIRKKIMDCVETATFKDQSPEEV 267
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF +D+++ + D VTLIEA +L F +L
Sbjct: 268 ERLLHMVVVGGGPTGVEFAGELQDFFDQDIKKWVPEISDKFKVTLIEALPNVLPMFSKQL 327
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DG---TEV-PYGLLVWSTGVGPST 190
Y + + + + + VK V + + DG TEV PYGLLVW+TG
Sbjct: 328 IEYTESTFKEEKITIKTKTAVKKVTDKTVEAEATGPDGKKFTEVMPYGLLVWATGNAVRP 387
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++A GDC +GY + AQVA
Sbjct: 388 VVKDLMAQIPAQKDSRRGLAVNEYLVVQGTKDIWATGDCAVAGYAPT---------AQVA 438
Query: 245 ERQGKYLFSLLNRIGKAG-----------------GGRANSAKDMELGD----------P 277
++G +L L N + K G A AK++E + P
Sbjct: 439 SQEGAFLARLFNTMAKTDTIEHEIQELSSSLNLGPGNAAEIAKEIEAHEKQLRRIKDIKP 498
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG +A+ D+ + + + G L++L WRSAYL+ S RNR V +
Sbjct: 499 FHYTHQGSLAYIGSERAVADV--SWLNGNFATGGNLTYLFWRSAYLSMCFSTRNRVLVVL 556
Query: 338 NWATTFVFGRDISR 351
+W + FGRD+SR
Sbjct: 557 DWLKSKTFGRDVSR 570
>gi|146415808|ref|XP_001483874.1| hypothetical protein PGUG_04603 [Meyerozyma guilliermondii ATCC
6260]
Length = 612
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 198/366 (54%), Gaps = 37/366 (10%)
Query: 15 LEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPG 74
+E + YD LVI +GA+ STFGI GV ++ FL+E+ A IR++L+ + +++
Sbjct: 254 MEEITTSVDYDYLVIGVGAQPSTFGIPGVAAHSVFLKEITDAVTIRKRLMDVIEAANILP 313
Query: 75 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 133
+ E+ RLL+ VV GGGPTGVE +GEL D+I +D+ + V + VT++EA + +L+
Sbjct: 314 KDDPERKRLLNIVVCGGGPTGVEVAGELQDYIDQDLTKWMPEVASDLKVTVVEAKSRVLN 373
Query: 134 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLI-------LNDGTEVPYGLLVWSTG 185
+F D L HY + + L +K+V+ + ++ ++ E PYGLL+W+TG
Sbjct: 374 TFSDNLVHYTQDIFQDTNIDLRTDTRIKEVNDRMVMGTRHAKGGDEYVEFPYGLLIWATG 433
Query: 186 VGPSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
P +V SL D ++ + +D+ L V +++A+GDCS + A
Sbjct: 434 NAPRGIVTSLFSKIDAQRNAKHGLFVDDRLLVNGTDNIYALGDCSTLKYA-------PTA 486
Query: 242 QVAERQGKYL---FSLLNRIG----KAGGGRANSAKD--------MELGDP-FVYRHLGS 285
QVA ++G +L F L+ I + AN + ++ P FVY H GS
Sbjct: 487 QVAFQEGIFLGKHFKALHEIDTLNYRIENAHANDNVESLKRRVDRLQKNLPIFVYNHKGS 546
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG +A+ DL SK +S G ++L WRSAY+ +S +N+ V ++WA ++F
Sbjct: 547 LAYIGSERAVADLVWGSWSK-VSTGGSFTFLFWRSAYIYMCLSVKNQILVCIDWAKVYMF 605
Query: 346 GRDISR 351
GRD S+
Sbjct: 606 GRDCSK 611
>gi|190348111|gb|EDK40505.2| hypothetical protein PGUG_04603 [Meyerozyma guilliermondii ATCC
6260]
Length = 612
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 198/366 (54%), Gaps = 37/366 (10%)
Query: 15 LEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPG 74
+E + YD LVI +GA+ STFGI GV ++ FL+E+ A IR++L+ + +++
Sbjct: 254 MEEITTSVDYDYLVIGVGAQPSTFGIPGVAAHSVFLKEITDAVTIRKRLMDVIEAANILP 313
Query: 75 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 133
+ E+ RLL+ VV GGGPTGVE +GEL D+I +D+ + V + VT++EA + +L+
Sbjct: 314 KDDPERKRLLNIVVCGGGPTGVEVAGELQDYIDQDLTKWMPEVASDLKVTVVEAKSRVLN 373
Query: 134 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLI-------LNDGTEVPYGLLVWSTG 185
+F D L HY + + L +K+V+ + ++ ++ E PYGLL+W+TG
Sbjct: 374 TFSDNLVHYTQDIFQDTNIDLRTDTRIKEVNDRMVMGTRHAKGGDEYVEFPYGLLIWATG 433
Query: 186 VGPSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
P +V SL D ++ + +D+ L V +++A+GDCS + A
Sbjct: 434 NAPRGIVTSLFSKIDAQRNAKHGLFVDDRLLVNGTDNIYALGDCSTLKYA-------PTA 486
Query: 242 QVAERQGKYL---FSLLNRIG----KAGGGRANSAKD--------MELGDP-FVYRHLGS 285
QVA ++G +L F L+ I + AN + ++ P FVY H GS
Sbjct: 487 QVAFQEGIFLGKHFKALHEIDTLNYRIENAHANDNVESLKRRVDRLQKNLPIFVYNHKGS 546
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG +A+ DL SK +S G ++L WRSAY+ +S +N+ V ++WA ++F
Sbjct: 547 LAYIGSERAVADLVWGSWSK-VSTGGSFTFLFWRSAYIYMCLSVKNQILVCIDWAKVYMF 605
Query: 346 GRDISR 351
GRD S+
Sbjct: 606 GRDCSK 611
>gi|225555376|gb|EEH03668.1| alternative NADH-dehydrogenase [Ajellomyces capsulatus G186AR]
Length = 586
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 203/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE +TFGI GV+E++ FL+EV AQEIR++++ + + ++EE
Sbjct: 221 EVPYDMLVVGVGAENATFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTKEEV 280
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +F +L
Sbjct: 281 ERLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDSFKVTLVEALPNVLPTFSKQL 340
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + ++ DGT+ +PYGLLVW+TG
Sbjct: 341 IDYTESTFQEEAITIRTKTMVKKVSDKYIEAEVTKPDGTKELETIPYGLLVWATGNAVRG 400
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 401 VVRDLMSQIPAQSKSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTAQVASQ 453
Query: 247 QGKYLFSLLNRIGKAGG----------GRANSAKDMELGD-------------------P 277
+G +L L N + K +A+++ D E P
Sbjct: 454 EGSFLARLFNSMAKTEAIEAELKELSTAQASASSDEERNKILDQIRALQKSLRRTKQLGP 513
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR VA
Sbjct: 514 FQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNRVLVAF 571
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 572 DWLKAKMFGRDVSR 585
>gi|50289709|ref|XP_447286.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526596|emb|CAG60223.1| unnamed protein product [Candida glabrata]
Length = 530
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 206/360 (57%), Gaps = 35/360 (9%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
++ I+YD LV+ +GA+ +TFGI GV EN++FL+E+ AQEIR K++ N+ + ++
Sbjct: 178 YELDINYDYLVVGVGAQPTTFGIPGVYENSSFLKEISDAQEIRIKIMRNIEKAASLAPND 237
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E+ RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I +TL+EA IL+ FD
Sbjct: 238 TERERLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKITLVEALPNILNMFD 297
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI--LNDGTE-VPYGLLVWSTGVGPSTLV 192
+L YA + + L ++ +VK VDS K+ D TE +PYG+LVW+TG P +
Sbjct: 298 KKLVTYAQDLFRQEKIDLRLKTMVKKVDSTKITAKCEDKTESIPYGVLVWATGNAPRDVC 357
Query: 193 KSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 247
K L +P++ R G I+ +++ +D ++A+GDC+ Y + P AQVA ++
Sbjct: 358 KGLMQKIPETQNSRRGLLINSKMQLLGAEDSIYAIGDCTFY-----PGLFPT-AQVAHQE 411
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELG-----------------DPFVYRHLGSMATIG 290
G+YL + ++ K ++K+ + + F Y H G++A IG
Sbjct: 412 GEYLARVFKKLHKVDQFEYMASKNNQTKENIKDLTSKINNLKAQIEDFQYNHHGALAYIG 471
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+A+ DL E+K LAG ++L W+ AYL +S++NR VA++W + GRD S
Sbjct: 472 SEQAIADLAVG-EAK-YRLAGSFTFLFWKYAYLAMCMSFKNRILVAMDWTKAYFLGRDTS 529
>gi|317030427|ref|XP_001392541.2| NADH-ubiquinone oxidoreductase C3A11.07 [Aspergillus niger CBS
513.88]
gi|350629661|gb|EHA18034.1| hypothetical protein ASPNIDRAFT_208150 [Aspergillus niger ATCC
1015]
Length = 578
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 205/373 (54%), Gaps = 51/373 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+EN+ FL+EV AQ+IR++++ + + +E+E
Sbjct: 214 EVPFDMLVVGVGAENATFGIPGVRENSCFLKEVDDAQKIRKRIMDCIETAMFKDQTEDEV 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +++ VTL+EA +L F +L
Sbjct: 274 KRLLHMVVVGGGPTGVEFAGELQDFFEDDLKKWVPEIQENFKVTLVEALPNVLPMFSKQL 333
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDS---QKLILN-DGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ N DG++ +PYGLLVW+TG
Sbjct: 334 IDYTESTFKEEKISIRAKTMVKNVTDKYIEAMVTNPDGSKSIERIPYGLLVWATGNAVRP 393
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 394 VVRDLMNQLPAQKDSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTAQVASQ 446
Query: 247 QGKYLFSLLNRIGKA------------GGGRANSAKDMELGD----------------PF 278
+G +L L N + K +A + ++ D PF
Sbjct: 447 EGAFLARLFNTMAKTEAIEKELKQLSEAQAQAKGEERDQVFDAIRERQKQLRRTKQIGPF 506
Query: 279 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
Y H GSMA IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR VAV+
Sbjct: 507 QYSHQGSMAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVAVD 564
Query: 339 WATTFVFGRDISR 351
W +FGRD+SR
Sbjct: 565 WIKAKLFGRDVSR 577
>gi|393222443|gb|EJD07927.1| FAD/NAD-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 575
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 200/366 (54%), Gaps = 46/366 (12%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+++GAE TFGI GVKE+A F++E+H A+E +R+ + + + PG S EE
Sbjct: 220 EIPYDYLVVSVGAEVQTFGIPGVKEHACFMKELHDAEEAQRRFMDCMETAAFPGQSPEEI 279
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
+RLLH VVVGGGPTGVE SGEL DF+ D+R Y + + +TL+EA +L F +L
Sbjct: 280 ARLLHVVVVGGGPTGVELSGELHDFLEDDLRAWYPELAGNVRITLVEALPSVLPMFSKQL 339
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKS 194
Y + + + L + +VK V Q ++L D T E+PYG+LVW+ G + S
Sbjct: 340 IDYTESTFKDAKIDILTKTMVKGVKEQTVLLQMPDKTLQEMPYGMLVWAGGNKARKV--S 397
Query: 195 LDL----PKSPGGRIG--IDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
LDL P++ + G ID++L + S D+FA+GDC+ + AQVA +Q
Sbjct: 398 LDLMAKFPEAQTNKRGLSIDDYLVMKGSKGDIFAIGDCTA-------SAYAPTAQVASQQ 450
Query: 248 GKYLFSLLNRIGKAG---------GGRANSA----------KDMELGD---PFVYRHLGS 285
G YL ++ K RA + K +E PF Y H GS
Sbjct: 451 GAYLARAFKQMAKRDTLEAQLSEVKARAQAEEGAEEVTRMEKQLEKAKKIRPFHYSHQGS 510
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG KA+ DL + + ++ G ++L WRS YL+ + S RNR VA +W +F
Sbjct: 511 LAYIGSEKAIADL--SFFNGNIASGGVATYLFWRSVYLSTLFSLRNRALVANDWLKVTLF 568
Query: 346 GRDISR 351
GRD+SR
Sbjct: 569 GRDVSR 574
>gi|451998250|gb|EMD90715.1| hypothetical protein COCHEDRAFT_1179822 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 200/378 (52%), Gaps = 54/378 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K ++ +D LV+ +GAE +TFGI GVKE+ FL+EV AQ IR +++ + SEE
Sbjct: 205 KTEVPFDMLVVGVGAENATFGIPGVKEHGLFLKEVGDAQRIRNRIMDCCETATFKDQSEE 264
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
EK RLLH VVVGGGPTGVEF+GEL DF D+++ ++D VTL+EA +L F
Sbjct: 265 EKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQDNFKVTLVEALPNVLPMFSK 324
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWSTGVG 187
+L Y + + + + +VK+V + K I + T +PYGLLVW+TG
Sbjct: 325 QLIDYTEKTFKEETIDIRTKTMVKNV-TDKYIEAESTGPDGRKQLERIPYGLLVWATGNA 383
Query: 188 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+VK L +P R G ++E+L V ++V+AVGDC+ + + T AQV
Sbjct: 384 LRPIVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----AQV 436
Query: 244 AERQGKYLFSLLNRIGKAG--------------GGRANSAKDMELGD------------- 276
A ++G +L + N + K A+D G+
Sbjct: 437 AAQEGAFLARMFNNMAKTAEIEGQLAELSIAQEKAPGKEARDKVFGEIKALQQRLRRIKS 496
Query: 277 --PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RNR
Sbjct: 497 IGPFEYSHQGSLAYIGSEKAVADI--SWFAGNIASGGTITYIFWRSAYLSMCFSTRNRIL 554
Query: 335 VAVNWATTFVFGRDISRI 352
V ++WA +FGRD+SR+
Sbjct: 555 VMLDWAKAKIFGRDVSRV 572
>gi|358371804|dbj|GAA88410.1| alternative NADH-dehydrogenase [Aspergillus kawachii IFO 4308]
Length = 567
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 205/373 (54%), Gaps = 51/373 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+EN+ FL+EV AQ+IR++++ + + +E+E
Sbjct: 203 EVPFDMLVVGVGAENATFGIPGVRENSCFLKEVDDAQKIRKRIMDCIETAMFKDQTEDEV 262
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +++ VTL+EA +L F +L
Sbjct: 263 KRLLHMVVVGGGPTGVEFAGELQDFFEDDLKKWVPEIQENFKVTLVEALPNVLPMFSKQL 322
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDS---QKLILN-DGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ N DG++ +PYGLLVW+TG
Sbjct: 323 IDYTESTFKEEKISIRAKTMVKNVTDKYIEAMVTNPDGSKSIERIPYGLLVWATGNAVRP 382
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 383 VVRDLMNQLPAQKDSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTAQVASQ 435
Query: 247 QGKYLFSLLNRIGKA------------GGGRANSAKDMELGD----------------PF 278
+G +L L N + K +A + ++ D PF
Sbjct: 436 EGAFLARLFNTMAKTEAIEQELKQLSDAQAQAKGEERDQVFDAIRERQKQLRRTKQIGPF 495
Query: 279 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
Y H GSMA IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR VAV+
Sbjct: 496 QYSHQGSMAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVAVD 553
Query: 339 WATTFVFGRDISR 351
W +FGRD+SR
Sbjct: 554 WIKAKLFGRDVSR 566
>gi|295669872|ref|XP_002795484.1| external NADH-ubiquinone oxidoreductase [Paracoccidioides sp.
'lutzii' Pb01]
gi|226285418|gb|EEH40984.1| external NADH-ubiquinone oxidoreductase [Paracoccidioides sp.
'lutzii' Pb01]
Length = 587
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 201/375 (53%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LVI +GAE STFGI GV+E++ FL+EV AQEIR++++ + + +EEE
Sbjct: 222 EVPYDMLVIGVGAENSTFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTEEEV 281
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD+ +TL+EA +L +F +L
Sbjct: 282 KRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDHFKITLVEALPNVLPTFSKQL 341
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTE---------VPYGLLVWSTGVGPS 189
Y + + + L + VK V S K I + T+ +PYGLLVW+TG
Sbjct: 342 IDYTESTFKEEEITILTKTSVKKV-SDKYIEAEATKPDGSKEMETIPYGLLVWATGNSIR 400
Query: 190 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA
Sbjct: 401 GVVRDLINQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVAS 453
Query: 246 RQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD---------------- 276
++G +L L N ++ KA N ++ D
Sbjct: 454 QEGAFLARLFNSMAKTEAIDAQLKQLSKAQAEAQNEEARTKILDEIRGLQKVLRRIKQIG 513
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR VA
Sbjct: 514 PFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNRVLVA 571
Query: 337 VNWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 572 FDWFKAKLFGRDVSR 586
>gi|354543521|emb|CCE40240.1| hypothetical protein CPAR2_102780 [Candida parapsilosis]
Length = 568
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 196/363 (53%), Gaps = 44/363 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV E++TFL+EV A IRR+L+ + +++ S+ E+
Sbjct: 216 LNYDYLVVGVGAQPSTFGIPGVAEHSTFLKEVSDASTIRRRLMDVIEAANILPKSDPERK 275
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GE+ D+I +D+ + ++ + VTL+EA +L++F+ +L
Sbjct: 276 RLLQIVVCGGGPTGVEAAGEIQDYIDQDLHKWVPELEGELKVTLVEALPNVLNTFNKKLI 335
Query: 141 HYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGP--- 188
Y + + L+ ++K V + L + DG+ E+PYG+L+W+TG
Sbjct: 336 DYTKEVFKDTNINLMTNTMIKKVGDKVLTASQKQPDGSTKTVEIPYGVLIWATGNAARGF 395
Query: 189 -STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L+ ++ K+ + +DE L+V ++FA+GDC+ T P AQVA ++
Sbjct: 396 TRDLMSKIEEQKNAKRGLLVDECLKVDGTSNIFALGDCTF-------TKYPPTAQVAFQE 448
Query: 248 GKYLFSLLNRIGKA-------------------GGGRANSAKDMELGDPFVYRHLGSMAT 288
G+YL ++ + G A + K + F Y + GS+A
Sbjct: 449 GEYLAKYFEKLHQVESLQYQIQHPTPKQNVDTLGKKLARAEKSLP---KFQYNYQGSLAY 505
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL S ++ G ++L WRSAY+ +S +N+ V ++W ++FGRD
Sbjct: 506 IGSEKAVADLVWGDWS-NITSGGNFTFLFWRSAYIYMCLSVKNQCLVILDWMKVYLFGRD 564
Query: 349 ISR 351
S+
Sbjct: 565 CSK 567
>gi|134077054|emb|CAK39927.1| unnamed protein product [Aspergillus niger]
Length = 567
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 205/373 (54%), Gaps = 51/373 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+EN+ FL+EV AQ+IR++++ + + +E+E
Sbjct: 203 EVPFDMLVVGVGAENATFGIPGVRENSCFLKEVDDAQKIRKRIMDCIETAMFKDQTEDEV 262
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +++ VTL+EA +L F +L
Sbjct: 263 KRLLHMVVVGGGPTGVEFAGELQDFFEDDLKKWVPEIQENFKVTLVEALPNVLPMFSKQL 322
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDS---QKLILN-DGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ N DG++ +PYGLLVW+TG
Sbjct: 323 IDYTESTFKEEKISIRAKTMVKNVTDKYIEAMVTNPDGSKSIERIPYGLLVWATGNAVRP 382
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 383 VVRDLMNQLPAQKDSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTAQVASQ 435
Query: 247 QGKYLFSLLNRIGKA------------GGGRANSAKDMELGD----------------PF 278
+G +L L N + K +A + ++ D PF
Sbjct: 436 EGAFLARLFNTMAKTEAIEKELKQLSEAQAQAKGEERDQVFDAIRERQKQLRRTKQIGPF 495
Query: 279 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
Y H GSMA IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR VAV+
Sbjct: 496 QYSHQGSMAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVAVD 553
Query: 339 WATTFVFGRDISR 351
W +FGRD+SR
Sbjct: 554 WIKAKLFGRDVSR 566
>gi|325094691|gb|EGC48001.1| alternative NADH-dehydrogenase [Ajellomyces capsulatus H88]
Length = 586
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 202/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE +TFGI GV+E++ FL+EV AQEIR++++ + + ++EE
Sbjct: 221 EVPYDMLVVGVGAENATFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTKEEV 280
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +F +L
Sbjct: 281 ERLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDSFKVTLVEALPNVLPTFSKQL 340
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + ++ DGT+ +PYGLLVW+TG
Sbjct: 341 IDYTESTFQEEAITIRTKTMVKKVSDKYIEAEVTKPDGTKELETIPYGLLVWATGNAVRG 400
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 401 VVRDLMSQIPAQSKSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTAQVASQ 453
Query: 247 QGKYLFSLLNRIGKAGG----------GRANSAKDMELGD-------------------P 277
+G +L L N + K +A++ D E P
Sbjct: 454 EGSFLARLFNSMAKTEAIEAELKELSTAQASAPSDEERNKILDQIRSLQKSLRRTKQLGP 513
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR VA
Sbjct: 514 FQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNRVLVAF 571
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 572 DWLKAKMFGRDVSR 585
>gi|440635335|gb|ELR05254.1| NADH dehydrogenase [Geomyces destructans 20631-21]
Length = 573
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 194/376 (51%), Gaps = 54/376 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K ++SYDKLVIA+GAE +TFGI GV E++ FL+EV AQ IR K++ + + S E
Sbjct: 208 KTEVSYDKLVIAVGAENATFGIQGVTEHSCFLKEVGDAQRIRTKIMDCIETATFKDQSPE 267
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLLH VVVGGGPTGVEF+GEL DF +D+R+ + D VTLIEA +L SF
Sbjct: 268 EIKRLLHMVVVGGGPTGVEFAGELQDFFDQDIRKWVPEISDKFKVTLIEALPNVLPSFSK 327
Query: 138 RLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGP 188
+L Y + + + + V+ + + + DG T +PYGLLVW+TG
Sbjct: 328 QLIDYTESTFKEEKITIMTKTAVKKVTANTVEAEATSPDGKKTTTILPYGLLVWATGNAV 387
Query: 189 STLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQ 242
+V L +P R G ++E+L V D++A GDC +GY + AQ
Sbjct: 388 RPIVHDLMSQIPAQKDSRRGLAVNEYLVVQGTTDIWATGDCAVAGYAPT---------AQ 438
Query: 243 VAERQGKYLFSLLNRIGKA--------------------GGGRANSAKDMELG------- 275
VA ++G +L L N + K A +D++
Sbjct: 439 VAAQEGAFLARLFNTMAKTEFLESRIDELSTSLNVTRTDAPVVATELEDLQKSLRRIKDI 498
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
PF Y H GS+A IG +A+ D+ + + G L++L WRSAYL+ S RNR V
Sbjct: 499 KPFHYSHQGSLAYIGSDRAVADVTWF--NGNFASGGSLTYLFWRSAYLSMCFSTRNRVLV 556
Query: 336 AVNWATTFVFGRDISR 351
V+W + FGRD+SR
Sbjct: 557 VVDWLKSKAFGRDVSR 572
>gi|255720514|ref|XP_002556537.1| KLTH0H15708p [Lachancea thermotolerans]
gi|238942503|emb|CAR30675.1| KLTH0H15708p [Lachancea thermotolerans CBS 6340]
Length = 538
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/354 (37%), Positives = 204/354 (57%), Gaps = 33/354 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+ +GA+ +TFGI GV ENA+FL+E+ AQEIR K++ N+ + +S+ E+
Sbjct: 192 LKYDYLVVGVGAQPTTFGIPGVFENASFLKEIPDAQEIRVKVMNNIEKATTLPVSDPERK 251
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL+ VVVGGGPTGVEF+ EL D+I +D+ + + +HVTL+EA IL+ FD L
Sbjct: 252 RLLNFVVVGGGPTGVEFAAELQDYIDQDLSKWMPELSKELHVTLVEALPNILNMFDKSLI 311
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLIL---NDGTEVPYGLLVWSTGVGPSTLVKSL- 195
YA ++ + L +VK+V + +D ++PYG+LVW+TG P + KSL
Sbjct: 312 KYAEDLFQETKINLRTNTMVKNVTPTVITAKCGDDIEDIPYGVLVWATGNAPREVSKSLM 371
Query: 196 DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
+ + R G I+E L++ +D ++A+GDC+ Y + P AQVA ++G+YL
Sbjct: 372 NRMECQNSRRGLLINEKLQLLGAEDSIWAIGDCTFY-----PGLFPT-AQVAHQEGEYLA 425
Query: 253 SLLNRIGKAGGGR------ANSAKDMELGD----------PFVYRHLGSMATIGRYKALV 296
S+L + K + +N+A++ +L F Y H G++A IG KA+
Sbjct: 426 SVLKKQYKIDQLKWHTLQNSNAAENDKLKSKVEKLSSQIKAFKYNHHGALAYIGSEKAIA 485
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
DL + LAG ++L W+SAYL +S+RNR VA++W FGRD S
Sbjct: 486 DLALGESM--YHLAGSFTFLFWKSAYLNMCLSFRNRLLVALDWCKVSFFGRDSS 537
>gi|340959699|gb|EGS20880.1| hypothetical protein CTHT_0027180 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 580
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 202/374 (54%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LVI +GAE +TFGI GV+E++ FL+E+ AQ+IR++++ + + S EE
Sbjct: 217 EVPYDMLVIGVGAENATFGIPGVREHSCFLKEIGDAQKIRKRIMDCVETAMFKDQSPEEI 276
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L F +L
Sbjct: 277 DRLLHMVVVGGGPTGVEFAGELQDFFQEDIKKLVPEIADRFRVTLIEALPNVLPMFSRQL 336
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + +VK V+ + ++ DGT+ PYGLLVW+TG
Sbjct: 337 IEYTERSFKEEKINIHTKTVVKKVNEKSVEAEVTRPDGTKETIVFPYGLLVWATGNAVRP 396
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 397 VVRDLMSKIPAQKNSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 447
Query: 245 ERQGKYLFSLLNRIGKAGG-----GRANSAKDMELGD----------------------P 277
++G +L L N + K +S+ ++E G+ P
Sbjct: 448 AQEGTFLARLFNNMAKTEALEEKIRHLSSSLNLEPGNSAEISQEIAELERKLRRIKDVKP 507
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + ++ AG L++L WRSAY++ S RN+ V
Sbjct: 508 FQYSHQGSLAYIGSEKAVADITWF--NGNVAAAGSLTFLFWRSAYVSMCFSMRNKLLVIN 565
Query: 338 NWATTFVFGRDISR 351
+W + VFGRD+SR
Sbjct: 566 DWLKSKVFGRDLSR 579
>gi|126275277|ref|XP_001386827.1| NADH dehydrogenase [Scheffersomyces stipitis CBS 6054]
gi|126212696|gb|EAZ62804.1| NADH dehydrogenase [Scheffersomyces stipitis CBS 6054]
Length = 557
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 193/360 (53%), Gaps = 38/360 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LV+ +GA+ STFGI GV EN+ FL+EV + IR++L+ + +++ + E+
Sbjct: 205 LSYDYLVVGVGAQPSTFGIPGVAENSVFLKEVSDSVTIRKRLMDVIEAANILPKGDSERK 264
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GEL D+I +D+++ V D + VTL+EA +L+ F+ +L
Sbjct: 265 RLLSIVVCGGGPTGVEVAGELQDYIDQDLKKWMPEVADELKVTLVEALPNVLNMFNAKLV 324
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGT----EVPYGLLVWSTGVGPSTL 191
Y +++ + L +VK V + + L DG+ E+PYGLL+W+TG P +
Sbjct: 325 EYTKEVFAETNIILRTNTMVKKVSDKNVHASHKLKDGSTESVEIPYGLLIWATGNAPRDI 384
Query: 192 VKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+ L D K+ + +DE + + ++FA+GDC+ T AQVA ++
Sbjct: 385 TRDLISKVDEQKNARRGLLVDERMLLDGTDNIFALGDCTF-------TKYAPTAQVAFQE 437
Query: 248 GKYL---FSLLNRIGKAGGGRANSAK------------DMELGDP-FVYRHLGSMATIGR 291
G +L F+ L+ + AN +E P F Y H GS+A IG
Sbjct: 438 GIFLAKHFAKLHELESLKYTLANPKPTDNTDRLTKKLTKLEQKLPVFQYNHQGSLAYIGS 497
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+A+ DL S ++ G ++L WRSAY+ +S +N+ V +W +FGRD S+
Sbjct: 498 ERAVADLVWGDWS-NITSGGSFTYLFWRSAYIYMCLSVKNQILVCFDWVKVSLFGRDCSK 556
>gi|225682897|gb|EEH21181.1| external NADH-ubiquinone oxidoreductase [Paracoccidioides
brasiliensis Pb03]
Length = 587
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 202/375 (53%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LVI +GAE STFGI GV+E++ FL+EV AQEIR++++ + + +E+E
Sbjct: 222 EVPYDMLVIGVGAENSTFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTEKEV 281
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD+ +TL+EA +L +F +L
Sbjct: 282 KRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDHFKITLVEALPNVLPTFSKQL 341
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTE---------VPYGLLVWSTGVGPS 189
Y + + + L + VK V S K I + T+ +PYGLLVW+TG
Sbjct: 342 IDYTESTFKEEEITILTKTSVKKV-SDKYIEAEATKPDGSKEMETIPYGLLVWATGNSIR 400
Query: 190 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+V+ L +P+ R G ++E+L V ++++AVGDC+ T AQVA
Sbjct: 401 GVVRDLINQIPEQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTAQVAS 453
Query: 246 RQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD---------------- 276
++G +L L N ++ KA N ++ D
Sbjct: 454 QEGAFLARLFNSMAKTEAIDAQLKQLSKAQAEAQNEEARTKILDEIRGLQKVLRRIKQIG 513
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR VA
Sbjct: 514 PFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNRVLVA 571
Query: 337 VNWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 572 FDWFKAKLFGRDVSR 586
>gi|317142154|ref|XP_001818887.2| NADH-ubiquinone oxidoreductase C3A11.07 [Aspergillus oryzae RIB40]
Length = 578
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 205/375 (54%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GVKE++ FL+EV AQ+IR +++ + + +E+E
Sbjct: 213 EVPFDMLVVGVGAENATFGIKGVKEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTEDEI 272
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GE+ DF D+++ +K+ VTL+EA +L F +L
Sbjct: 273 KRLLHMVVVGGGPTGVEFAGEIQDFFEEDLKKWVPEIKENFKVTLVEALPNVLPMFSKQL 332
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 333 IDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGNAVRP 392
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 393 VVRDLMSQLPAQKNSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTAQVASQ 445
Query: 247 QGKYLFSLLNRIGKA------------GGGRANSAKD------------------MELGD 276
+G +L L N + K +A S ++ ++G
Sbjct: 446 EGAFLARLFNTMAKTEAIEDDLKQLSEAQAQAKSPEERNQIFDEIRERQKQLRRTKQIG- 504
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR VA
Sbjct: 505 PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVA 562
Query: 337 VNWATTFVFGRDISR 351
V+W +FGRD+SR
Sbjct: 563 VDWVKAKMFGRDVSR 577
>gi|320031207|gb|EFW13189.1| hypothetical protein CPSG_10212 [Coccidioides posadasii str.
Silveira]
Length = 579
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 203/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA +TFGI GVKE++ FL+EV AQ+IR +++ + + + EE
Sbjct: 214 EVPFDMLVVGVGAANATFGIPGVKEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTPEEV 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F +L
Sbjct: 274 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFHVTLVEALPNVLPMFSKQL 333
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILN-DGT----EVPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + + + N DG+ ++PYGLLVW+TG
Sbjct: 334 IDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTNPDGSKEMEKIPYGLLVWATGNAVRP 393
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+VK L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 394 VVKDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQ 446
Query: 247 QGKYLFSLLNRIGKAGGGRAN---------SAKDMELGD--------------------P 277
+G +L L N + K + AKD E + P
Sbjct: 447 EGAFLARLFNTMAKTEAIEKDLKKLSVAQYEAKDDEKRNQLLDEIRALQKQLRRTKQIGP 506
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR VA+
Sbjct: 507 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVAL 564
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 565 DWVKARLFGRDVSR 578
>gi|391874564|gb|EIT83429.1| NADH-dehydrogenase [Aspergillus oryzae 3.042]
Length = 578
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 205/375 (54%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GVKE++ FL+EV AQ+IR +++ + + +E+E
Sbjct: 213 EVPFDMLVVGVGAENATFGIKGVKEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTEDEI 272
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GE+ DF D+++ +K+ VTL+EA +L F +L
Sbjct: 273 KRLLHMVVVGGGPTGVEFAGEIQDFFEEDLKKWVPEIKENFKVTLVEALPNVLPMFSKQL 332
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 333 IDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGNAVRP 392
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 393 VVRDLMSQLPAQKNSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTAQVASQ 445
Query: 247 QGKYLFSLLNRIGKA------------GGGRANSAKD------------------MELGD 276
+G +L L N + K +A S ++ ++G
Sbjct: 446 EGAFLARLFNTMAKTEAIEDDLKQLSEAQAQAKSPEERNQIFDEIRERQKQLRRTKQIG- 504
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR VA
Sbjct: 505 PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVA 562
Query: 337 VNWATTFVFGRDISR 351
V+W +FGRD+SR
Sbjct: 563 VDWVKAKMFGRDVSR 577
>gi|156035569|ref|XP_001585896.1| hypothetical protein SS1G_12988 [Sclerotinia sclerotiorum 1980]
gi|154698393|gb|EDN98131.1| hypothetical protein SS1G_12988 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 598
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 197/420 (46%), Gaps = 100/420 (23%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLV+++G + TFGI GV+ENA FL+++ A++IR+++L + +P SE
Sbjct: 192 FEVGYDKLVVSVGCYSQTFGIEGVRENALFLKDIGDARKIRKRILECFETAALPTSSESL 251
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LL+ +VGGGPTGVEF+ EL D D+ Y + YI +T+ + A +IL FD
Sbjct: 252 KKQLLNFAIVGGGPTGVEFAAELFDLCHEDLSTLYPSLTSYIKITIYDVAPKILPMFDKN 311
Query: 139 LRHYATTQLSKSGVR---------LVRGIVKDV---------DSQK---LILNDGTEVPY 177
L +YA S+ G+ L +G KD D K L L + +V
Sbjct: 312 LANYALEHFSRDGIDIKTEHHILGLKKGFPKDSLEGENGHEEDIGKGFTLNLKEEGDVGV 371
Query: 178 GLLVWSTGV-----------------------------GPSTLVKSL-----DLPKSPG- 202
G+ VWSTG+ G S +SL +L +SP
Sbjct: 372 GMCVWSTGLMMNPFIEKALSSVHTFPSKSAILATSGEKGISQKSESLENRKWELKRSPKT 431
Query: 203 GRIGIDEWLRV------------------------------PSVQDVFAVGDCSGYLEST 232
G + +D + RV + DVFA+GD +
Sbjct: 432 GGLMVDNFFRVKLATRSSASTSSSSTKSPSQSSIKEQTQQEAIMDDVFALGDVA----VL 487
Query: 233 GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 292
G LPA AQVA ++ K+L LNRI G SA F ++++G M +G
Sbjct: 488 GDMALPATAQVANQEAKWLGKRLNRI----YGVEKSAVGESGDKGFTFKNMGVMTYVGGM 543
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
KA++ E KG + +WL+WR AYLT+ +SWRN+ + + W + FGRDISR
Sbjct: 544 KAIMQTDAKGEIKGRT-----AWLIWRGAYLTQTISWRNKLLIPMYWVINWFFGRDISRF 598
>gi|303314061|ref|XP_003067039.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240106707|gb|EER24894.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 579
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 203/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA +TFGI GVKE++ FL+EV AQ+IR +++ + + + EE
Sbjct: 214 EVPFDMLVVGVGAANATFGIPGVKEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTPEEV 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F +L
Sbjct: 274 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFHVTLVEALPNVLPMFSKQL 333
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILN-DGT----EVPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + + + N DG+ ++PYGLLVW+TG
Sbjct: 334 IDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTNPDGSKEIEKIPYGLLVWATGNAVRP 393
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+VK L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 394 VVKDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQ 446
Query: 247 QGKYLFSLLNRIGKAGGGRAN---------SAKDMELGD--------------------P 277
+G +L L N + K + AKD E + P
Sbjct: 447 EGAFLARLFNTMAKTEAIEKDLKKLSVAQYEAKDDEKRNQLLDEIRALQKQLRRTKQIGP 506
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR VA+
Sbjct: 507 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVAL 564
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 565 DWVKARLFGRDVSR 578
>gi|83766745|dbj|BAE56885.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 567
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 205/375 (54%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GVKE++ FL+EV AQ+IR +++ + + +E+E
Sbjct: 202 EVPFDMLVVGVGAENATFGIKGVKEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTEDEI 261
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GE+ DF D+++ +K+ VTL+EA +L F +L
Sbjct: 262 KRLLHMVVVGGGPTGVEFAGEIQDFFEEDLKKWVPEIKENFKVTLVEALPNVLPMFSKQL 321
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 322 IDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGNAVRP 381
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 382 VVRDLMSQLPAQKNSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTAQVASQ 434
Query: 247 QGKYLFSLLNRIGKA------------GGGRANSAKD------------------MELGD 276
+G +L L N + K +A S ++ ++G
Sbjct: 435 EGAFLARLFNTMAKTEAIEDDLKQLSEAQAQAKSPEERNQIFDEIRERQKQLRRTKQIG- 493
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR VA
Sbjct: 494 PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVA 551
Query: 337 VNWATTFVFGRDISR 351
V+W +FGRD+SR
Sbjct: 552 VDWVKAKMFGRDVSR 566
>gi|392563014|gb|EIW56194.1| FAD/NAD-P-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 548
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 194/362 (53%), Gaps = 41/362 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TF I GV+ENA F++E+ A++++R+ L L + PG S EE
Sbjct: 195 IPYDYLVFAVGAEVQTFNIPGVRENACFMKELEDAEKMQRRFLDCLESAAFPGQSTEEIK 254
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF+ D+R Y + + + ++L+EA +L F +L
Sbjct: 255 RLLHMVVVGGGPTGVELSGELHDFLEEDLRSWYPELAENVRISLVEALPSVLPMFSKQLI 314
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L + +VK++ + ++L D T EVP GL+VW+ G + + L
Sbjct: 315 DYTESTFKEAKIDILTKTMVKEIKDKSVVLQMPDKTVVEVPCGLVVWAAGNTLRKVTRDL 374
Query: 196 --DLPKSPGGRIGI--DEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
P R GI DE LR+ S +FA+GDCS T AQVA ++G Y
Sbjct: 375 MSKFPDVQTNRRGITVDECLRMEGSNGSIFAIGDCSA-------TSYAPTAQVASQEGAY 427
Query: 251 LFSLLNRIGKAGGGRA-----NSAKDMELGD----------------PFVYRHLGSMATI 289
L +L++I K A SA + E + PF Y H GS+A I
Sbjct: 428 LARVLSQIAKKDELDARLKALQSASEPEAKEEQEQVQKRLAKLEKLRPFKYSHQGSLAYI 487
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G KA+ DL + + G ++L WRS YL+ + S RNR VA +W +FGRD+
Sbjct: 488 GSDKAIADLPFF--NGNFASGGIATYLFWRSVYLSTLFSVRNRTLVATDWLYVKLFGRDV 545
Query: 350 SR 351
SR
Sbjct: 546 SR 547
>gi|366992588|ref|XP_003676059.1| hypothetical protein NCAS_0D01150 [Naumovozyma castellii CBS 4309]
gi|342301925|emb|CCC69696.1| hypothetical protein NCAS_0D01150 [Naumovozyma castellii CBS 4309]
Length = 549
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 204/363 (56%), Gaps = 38/363 (10%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K + YD LV+A+G++ +TFGI GVKE+++FL+EV A++IR K+L NL L+ +
Sbjct: 193 KTSLKYDYLVVAVGSQPTTFGIPGVKEHSSFLKEVSDAKKIREKILENLELASNLSEDDP 252
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDD 137
++ RLL VVVGGGPTGVEF+ EL D++ +D+ + + I VTL+E IL SFD
Sbjct: 253 KRKRLLSFVVVGGGPTGVEFAAELKDYVDQDLTKWMPKLSKEIRVTLVEGTPNILGSFDK 312
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDGTE---VPYGLLVWSTGVGPSTLV 192
+L YA ++ + L +R VK V+ + + LN E +PYG+LVW+TG P +
Sbjct: 313 KLIKYAEDTFNEEHIDLQLRTRVKSVNCENVQALNPNGELIDIPYGVLVWATGNAPREVT 372
Query: 193 KSL--DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQG 248
K+L L + R + IDE LR+ ++ ++A+GDC+ Y + P AQVA ++
Sbjct: 373 KNLMSKLEEQTSRRGLLIDEKLRLLGAENSIYAIGDCTFY-----PGLFPT-AQVAHQEA 426
Query: 249 KYL---FSLLNRIG-------KAGGGRANSAKDMELGDP-----------FVYRHLGSMA 287
+YL F LN+I K + KD + D F Y HLG++A
Sbjct: 427 EYLSRVFKKLNKIDQLEWQVQKTKANENITEKDTKTLDKNIDKLPTKIENFKYNHLGALA 486
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
IG KA+ DL SK L G ++L ++SAYL +S+RNR V ++WA + FGR
Sbjct: 487 YIGAEKAVADLSMFGTSKQY-LTGSFTFLFYKSAYLAMCLSFRNRILVTLDWAKVYFFGR 545
Query: 348 DIS 350
D S
Sbjct: 546 DSS 548
>gi|451852875|gb|EMD66169.1| hypothetical protein COCSADRAFT_197678 [Cochliobolus sativus
ND90Pr]
Length = 580
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 194/412 (47%), Gaps = 96/412 (23%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F ++YDKL++ +G + TFG GVKE+A FL++V A+ IR ++L + +P +
Sbjct: 186 FDVTYDKLIVTVGCYSQTFGTPGVKEHAFFLKDVGDARRIRNRILACFEGAALPTTPVDM 245
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LL+ VVGGGPTG+EFS EL D I D+++ Y + Y +T+ + A ++L FD +
Sbjct: 246 KRQLLNFAVVGGGPTGIEFSAELHDLINEDLKKLYPELIQYHKITVYDVAEKVLPMFDKK 305
Query: 139 LRHYATTQLSKSGVRLVRG------------------IVKDVDSQKLILNDGTEVPYGLL 180
L YA + + G+ + V+D L + + E+ G+
Sbjct: 306 LADYAMQKFKREGIDIKTSHHVEELRAGAPVETSNSETVQDSHLYTLRIKEQGEIGVGMC 365
Query: 181 VWSTGV---------------GPSTLVKSL--------------------DLPKSP-GGR 204
VWSTG+ PS L+ S + K P G
Sbjct: 366 VWSTGLMQNPFVHTALSSVRSAPSNLITSSTSSSSSSSSSSSSSSSSIQWTVKKDPKSGS 425
Query: 205 IGIDEWLRVP---------------SVQ---------DVFAVGDCSGYLESTGKTVLPAL 240
I D LRV SVQ DVFA+GDC G +++ T PA
Sbjct: 426 IVTDSHLRVKLVPASDSSSSYAEKDSVQADKTEAINPDVFALGDC-GIIDA---TTYPAT 481
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQVA ++ +L LN+ A SAK F YR LG++A IG + AL Q
Sbjct: 482 AQVASQKAVWLAKQLNK----SSTLAESAKG------FTYRDLGTLAYIGNWNALF---Q 528
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L G+++W++WR AY+TR VS RN+ V V W +VFGRDISR
Sbjct: 529 GGGKWGGRLQGYVAWIIWRGAYITRTVSLRNKVLVPVYWVVNWVFGRDISRF 580
>gi|453087191|gb|EMF15232.1| FAD/NAD(P)-binding domain-containing protein [Mycosphaerella
populorum SO2202]
Length = 559
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 204/375 (54%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+E+ FL+EV AQ IR++++ + S EE+
Sbjct: 194 EVPFDMLVVGVGAENATFGIPGVREHGCFLKEVGDAQRIRKRIMDCCETATFKDQSPEER 253
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ ++D HVTL+EA +L SF L
Sbjct: 254 KRLLHMVVVGGGPTGVEFAGELQDFFENDLKKWIPEIQDNFHVTLVEALPNVLPSFSKSL 313
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTEV----PYGLLVWSTGVGPST 190
Y + + + + +VK V+ + + +G +V PYGLLVW+TG
Sbjct: 314 IDYTEKTFEEETISIRTKTMVKKVEPEYIEAEYTNAEGKKVTEKIPYGLLVWATGNALRP 373
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+VK L +P R G ++E+L V ++V+AVGDC+ + + T AQVA +
Sbjct: 374 IVKDLMSQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----AQVASQ 426
Query: 247 QGKYLFSLLNRIG-----------------KAGGGRANSA-----KDM--------ELGD 276
+G +L + N +G KA A + KDM ++G
Sbjct: 427 EGFFLARMFNLMGKSEEIETKLKALSEEQEKAPNQEARNQVFEQIKDMQKRLRRVQQIG- 485
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR V
Sbjct: 486 PFEYSHQGSLAYIGSEKAVADI--SWLTGNLASGGQLTYLFWRSAYLSMCFSTRNRILVI 543
Query: 337 VNWATTFVFGRDISR 351
V+W + +FGRD+SR
Sbjct: 544 VDWMKSSLFGRDVSR 558
>gi|403414546|emb|CCM01246.1| predicted protein [Fibroporia radiculosa]
Length = 550
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 195/362 (53%), Gaps = 41/362 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TFGI GVKE++ F++E+ A++++R+ L L + PG S++E +
Sbjct: 197 IKYDYLVFAVGAEVQTFGIPGVKEHSCFMKELEDAEKMQRRFLDCLESAAFPGQSQDEVN 256
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGE+ DF+ D+R Y + + + +TL+EA +L F +L
Sbjct: 257 RLLHMVVVGGGPTGVEVSGEIHDFLEEDLRSWYPELANSVRITLVEALPSVLPMFSKQLI 316
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L + +VK++ + ++L EVP GL++W+ G + + L
Sbjct: 317 DYTESTFKEAKIDILTKTMVKEIKEKSVVLQRPDKSIVEVPCGLVIWAAGNKLRKVTQDL 376
Query: 196 --DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
LP++ R + +D LR+ ++A+GDC+ T AQVA +QG YL
Sbjct: 377 MARLPQAQTNRRGVAVDAHLRMEGTDSIWAIGDCAA-------TSYAPTAQVASQQGAYL 429
Query: 252 FSLLNRIGK-----------AGGGRANSAK-----------DMELGDPFVYRHLGSMATI 289
+L +I K G + K E PF Y H GS+A I
Sbjct: 430 ARILAQIAKRDNLEVRLKTLQDGPQTEETKPEIASIERQLVKTEKLRPFHYSHQGSLAYI 489
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G KA+ DL + L+ G ++L WRSAYL+ + S RNR VA +W +FGRD+
Sbjct: 490 GSDKAIADL--PFFNGNLATGGVATFLFWRSAYLSTLFSLRNRTLVATDWIKVKLFGRDV 547
Query: 350 SR 351
SR
Sbjct: 548 SR 549
>gi|299739101|ref|XP_001835053.2| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
gi|298403623|gb|EAU86695.2| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
Length = 563
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 196/366 (53%), Gaps = 45/366 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TF I GVKE+A F++E+H A+ +R + + + PG S EE
Sbjct: 206 IQYDYLVYAVGAETQTFNIPGVKEHAVFMKELHDAERFQRGFMDCVETAAFPGQSPEEID 265
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF+ D++ Y + I +TL+EA +L F +L
Sbjct: 266 RLLHMVVVGGGPTGVEVSGELHDFLEDDLKHWYPELAGRIRITLVEALPSVLPMFSRQLI 325
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKSL 195
Y + +S + L + +VK+V + ++L D + EVP GL+VW+ G + + L
Sbjct: 326 DYTESTFKESKIDILTKTMVKEVKEKSVVLQMPDKSIKEVPCGLVVWAAGNKGRKITQDL 385
Query: 196 --DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
LP++ R G +D+ LR+ VFA+GDC+ T AQVA +QG YL
Sbjct: 386 MAKLPETQTNRRGLTVDDHLRLKGADGVFAIGDCTA-------TSYAPTAQVASQQGAYL 438
Query: 252 FSLLNRIGKAGG--GRANSAKDMELGDP------------------------FVYRHLGS 285
+L+++ K R +++++ DP F Y H GS
Sbjct: 439 ARVLHQLAKKDSIEQRLKKLEEIQVEDPAEKEKLEKEAKLLQSQLAKVKPRAFQYSHQGS 498
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG +A+ DL + ++ G ++L WRSAYL+ + S RNR VA +W +F
Sbjct: 499 LAYIGSERAIADL--PFMNGNVATGGVATYLFWRSAYLSTLFSLRNRTLVATDWLKVRLF 556
Query: 346 GRDISR 351
GRD+SR
Sbjct: 557 GRDVSR 562
>gi|255725752|ref|XP_002547805.1| hypothetical protein CTRG_02112 [Candida tropicalis MYA-3404]
gi|240135696|gb|EER35250.1| hypothetical protein CTRG_02112 [Candida tropicalis MYA-3404]
Length = 528
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 190/357 (53%), Gaps = 35/357 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+++GA+ STFGI GV EN+ F++EV+ + +I++KL+ + +++ ++ E+
Sbjct: 179 LNYDYLVVSIGAQPSTFGIPGVAENSIFVKEVNDSVKIKKKLIDLVEAANLLPENDPERK 238
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLR 140
RLL +V GGGPTGVE +GE+ D+I +D+++ + + VTL+E+ +L +F +L
Sbjct: 239 RLLQVLVCGGGPTGVETAGEIQDYIDQDLKKWMPQIAKDMKVTLVESQPVVLHTFSPKLV 298
Query: 141 HYATTQLSKSGVRLVRG--IVKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKS 194
+ + + L+ IV+ ++ I N T +PYG+L+W+TG V
Sbjct: 299 DFTNHIFKDTNINLITNSRIVEVDNTHASIFNKKDHTTTPMPYGMLIWATGNSTRNFVSR 358
Query: 195 L--DLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
L +P+ R ++ L++ ++FA+GDC+ T PA AQVA +QG +L
Sbjct: 359 LIETIPEQTNRRGFLVNGKLKLNGSSNIFALGDCT-------ITKYPATAQVAFQQGCFL 411
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDP-----------------FVYRHLGSMATIGRYKA 294
++ K R D P FVY + GS+A IG KA
Sbjct: 412 AKYFGKLQKVESLRYKMQHDQSQQPPSEFSLKRLHKLEKALPEFVYNYRGSLAYIGSEKA 471
Query: 295 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ D+ S ++ G L++L WRSAY+ +S +N+ V +W ++FGRD SR
Sbjct: 472 VADVAVGSWS-NVAAGGNLTYLFWRSAYVMMCLSIKNQVLVCFDWIKVYLFGRDCSR 527
>gi|336469690|gb|EGO57852.1| hypothetical protein NEUTE1DRAFT_137632 [Neurospora tetrasperma
FGSC 2508]
gi|350290652|gb|EGZ71866.1| hypothetical protein NEUTE2DRAFT_166857 [Neurospora tetrasperma
FGSC 2509]
Length = 556
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 200/397 (50%), Gaps = 80/397 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP----GI 75
F + YDKLVIA GA + TFGI GV+E+A FLR+V A+ IR ++L L P +
Sbjct: 176 FDVPYDKLVIACGAYSQTFGIEGVREHANFLRDVGDARRIRLRVLSLFELCAYPKGVDNL 235
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 134
++E+++ LLH +VGGGPTG+E++ EL D I D+ + Y + ++ +T+ + + ++L
Sbjct: 236 TDEDRANLLHFAIVGGGPTGIEYASELHDLIHDDLSKMYPDLLKFVRITVYDVSPKVLPM 295
Query: 135 FDDRLRHYATTQLSKSGVRL--------VRGIVKDVDSQ------KLILNDGTEVPYGLL 180
FD L YA + + + VR + S+ K+ EV GL+
Sbjct: 296 FDQALSKYAMDAFKRQKIEIRTQHNIERVRPADGKLGSEYGELKLKIKQYGDKEVGAGLV 355
Query: 181 VWSTGVGPSTLVKSL-----DLPKSPGGR------------------IGIDEWLR----- 212
VWSTG+ + L+K L +P SP R I +DE R
Sbjct: 356 VWSTGLMANPLIKQLASKDFAVPISPEDRAEARRPKAKLATDARTGGILVDEHFRVRIET 415
Query: 213 -----------VPS------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
VP+ ++DVF +GD + +ES + LP AQVA +Q YL +L
Sbjct: 416 QTTDAAKGSEIVPTSSSNSLLRDVFVLGDAA-VIES--QRTLPKTAQVAAQQATYLAKVL 472
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N+ + D++ F +R+ G M +G +KA+ +++ L G+ +W
Sbjct: 473 NKANEG-------VIDVKDAPGFKFRNWGVMTYLGSWKAIHQGPRDE------LRGWAAW 519
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++WRSAYL + +SWRNRF V + W ++VFGR ISR
Sbjct: 520 VLWRSAYLAKSMSWRNRFLVPIYWLVSWVFGRGISRF 556
>gi|340515469|gb|EGR45723.1| predicted protein [Trichoderma reesei QM6a]
Length = 499
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 189/404 (46%), Gaps = 82/404 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP------ 73
F + YDKLVIA+GA + TFGI GV+E+A FLR+V A+ IR ++L P
Sbjct: 107 FNVEYDKLVIAVGAYSQTFGITGVREHAHFLRDVGDARRIRLRVLSLFEQCSYPTSPAGG 166
Query: 74 ---------GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 124
+SE +K LLH V+VGGGPTG+EF+ EL D I D+++ Y + + +T
Sbjct: 167 SSSTHVAGGSLSEADKRSLLHFVIVGGGPTGIEFAAELHDLIHEDLKRLYPELMPLVRIT 226
Query: 125 LIE-ANEILSSFDDRLRHYATTQLSKSG-----------VRLVRGIVKDVDS--QKLILN 170
+ + A ++L FD L YA ++ G VR+ G + I
Sbjct: 227 VYDIAPKVLPMFDQALAQYAMDTFARQGIQVRTQHHLERVRIADGALGSAHGGLSIKIKE 286
Query: 171 DGTEVPYGLLVWSTGVGPSTLVKSL---------DLPKSPG--------------GRIGI 207
EV GL+VWSTG+ + V+ L D G G I
Sbjct: 287 YSEEVNAGLVVWSTGLMQNPFVEHLVGKEFALAEDTDHQKGQDAQRRRLVKDAKTGGILT 346
Query: 208 DEWLRV-------------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
D +LR P + DVF +GDC+ + LP AQVA +Q
Sbjct: 347 DAYLRARITDNEASQPHDTAGATAKPVMPDVFVIGDCA---VNEHDRSLPKTAQVAAQQA 403
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
YL LN+ G +S PF +R+ G++ +G +KA+ +S
Sbjct: 404 GYLAKHLNK--ATHNGSLDSVDVSSTWKPFKFRNWGTLTYLGGWKAI------HQSSADE 455
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L G+++W+VWR AYLTR +S RN+ V V W ++VFGRDISR
Sbjct: 456 LRGWVAWVVWRGAYLTRSMSLRNKMMVPVYWFVSWVFGRDISRF 499
>gi|164428890|ref|XP_956666.2| hypothetical protein NCU00153 [Neurospora crassa OR74A]
gi|157072325|gb|EAA27430.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 550
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 200/397 (50%), Gaps = 80/397 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP----GI 75
F + YDKLVIA GA + TFGI GV+E+A FLR+V A+ IR ++L L P +
Sbjct: 170 FDVPYDKLVIACGAYSQTFGIEGVREHANFLRDVGDARRIRLRVLSLFELCAYPKGVDNL 229
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 134
++E+++ LLH +VGGGPTG+E++ EL D I D+ + Y + ++ +T+ + + ++L
Sbjct: 230 TDEDRANLLHFAIVGGGPTGIEYASELHDLIHDDLSKMYPDLLKFVRITVYDVSPKVLPM 289
Query: 135 FDDRLRHYATTQLSKSGVRL--------VRGIVKDVDSQ------KLILNDGTEVPYGLL 180
FD L YA + + + VR + S+ K+ EV GL+
Sbjct: 290 FDQALSKYAMDAFKRQKIEIRTQHNIERVRPADGKLGSEYGELKLKIKQYGDKEVGAGLV 349
Query: 181 VWSTGVGPSTLVKSL-----DLPKSPGGR------------------IGIDEWLR----- 212
VWSTG+ + L+K L +P SP R I +DE R
Sbjct: 350 VWSTGLMANPLIKQLASKDFAVPISPEDRAEARRPKAKLATDARTGGILVDEHFRVRIET 409
Query: 213 -----------VPS------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
VP+ ++DVF +GD + +ES + LP AQVA +Q YL +L
Sbjct: 410 QTTDAAKGSEIVPTSSSNSLLRDVFVLGDAA-VIES--QRTLPKTAQVAAQQATYLAKVL 466
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N+ + D++ F +R+ G M +G +KA+ +++ L G+ +W
Sbjct: 467 NKANEG-------VIDVKDAPGFKFRNWGVMTYLGSWKAIHQGPRDE------LRGWAAW 513
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++WRSAYL + +SWRNRF V + W ++VFGR ISR
Sbjct: 514 VLWRSAYLAKSMSWRNRFLVPIYWLVSWVFGRGISRF 550
>gi|115491705|ref|XP_001210480.1| hypothetical protein ATEG_00394 [Aspergillus terreus NIH2624]
gi|114197340|gb|EAU39040.1| hypothetical protein ATEG_00394 [Aspergillus terreus NIH2624]
Length = 576
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 202/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+E++ FL+EV AQ IR++++ + + +E+E
Sbjct: 211 EVPFDMLVVGVGAENATFGIKGVREHSCFLKEVGDAQNIRKRIMDCVETAMFKDQTEDEV 270
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ ++ + VTL+EA +L F +L
Sbjct: 271 KRLLHMVVVGGGPTGVEFAGELQDFFEEDLKKWIPDIQKHFKVTLVEALPNVLPMFSKQL 330
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ DGT ++PYGLLVW+TG
Sbjct: 331 IDYTESTFKEEAISIRAKTMVKNVTDKYIEAEVTKPDGTKELEKIPYGLLVWATGNAVRG 390
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 391 VVRDLMNQLPAQKNSRRGLAVNEYLVVNGTENVWAVGDCA-------ITNYAPTAQVASQ 443
Query: 247 QGKYLFSLLNRIGKAGG----------GRANSAKDMELGD-------------------P 277
+G +L L N + K ++ + D E P
Sbjct: 444 EGAFLARLFNTMAKTEAIENELKALSVAQSQAKSDEERNKVFDEIRDLQKQLRRTKQIGP 503
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR VAV
Sbjct: 504 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRVLVAV 561
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 562 DWIKAKLFGRDVSR 575
>gi|119174138|ref|XP_001239430.1| hypothetical protein CIMG_09051 [Coccidioides immitis RS]
gi|392869615|gb|EAS28129.2| alternative NADH-dehydrogenase [Coccidioides immitis RS]
Length = 579
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 204/375 (54%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA +TFGI GVKE++ FL+EV AQ+IR +++ + + + EE
Sbjct: 214 EVPFDMLVVGVGAANATFGIPGVKEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTPEEV 273
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F +L
Sbjct: 274 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFHVTLVEALPNVLPMFSKQL 333
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILN-DGT----EVPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + + + N DG+ ++PYGLLVW+TG
Sbjct: 334 IDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTNPDGSKEMEKIPYGLLVWATGNAVRP 393
Query: 191 LVKSLDLPKSPGGRI-----GIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+VK L + + P +I ++E+L V ++++AVGDC+ T AQVA
Sbjct: 394 VVKDL-MSQIPAQKISRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVAS 445
Query: 246 RQGKYLFSLLNRIGKAGGGRAN---------SAKDMELGD-------------------- 276
++G +L L N + K + AKD E +
Sbjct: 446 QEGAFLARLFNTMAKTEAIEKDLKKLSVAQYEAKDDEKRNQLLDEIRALQKQLRRTKQIG 505
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR VA
Sbjct: 506 PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVA 563
Query: 337 VNWATTFVFGRDISR 351
++W +FGRD+SR
Sbjct: 564 LDWVKARLFGRDVSR 578
>gi|393233215|gb|EJD40789.1| NADH dehydrogenase [Auricularia delicata TFB-10046 SS5]
Length = 542
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 193/359 (53%), Gaps = 37/359 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV A+GAE TFGI GV+E+A F++E+H A+ R ++ + + PG SE E
Sbjct: 191 MPYDYLVFAVGAETQTFGIPGVREHACFMKELHDAERFRENMMDCIETAAFPGQSEAEID 250
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF++ D++ Y + + +TLIEA +L F +L
Sbjct: 251 RLLHMVVVGGGPTGVELSGELHDFLVDDLKYWYPELASRLRITLIEALPTVLPMFSKQLI 310
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVKSL 195
Y + ++ + L + +VK++ +++ E+P+GLLVW+ G + K+L
Sbjct: 311 SYTESTFKENQIDILTKTMVKEIKPNAVVVQKEDKSLVELPFGLLVWAGGNTARPITKAL 370
Query: 196 --DLPKSPGGRIG--IDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
L S GR G +D+ L V S +FA+GDC+ +T AQVA ++G Y
Sbjct: 371 MASLGASQAGRRGLAVDDHLCVAGSGGSIFALGDCT-------QTAYAPTAQVASQEGAY 423
Query: 251 LFSLLNRIGKA-----------GGGRANSAKDMELG-------DPFVYRHLGSMATIGRY 292
L ++ + G AK +E PF Y H GS+A IG
Sbjct: 424 LARQFAQMARKHALEQDLQVLRADGAEEDAKKVEASLARAGRFAPFHYSHQGSLAYIGSD 483
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+A+ DL + L+ G ++L WRSAY++ + S RNR VA +W T +FGRD+SR
Sbjct: 484 RAIADLPLFG-AGNLATGGVATYLFWRSAYISTLFSLRNRVLVATDWLATKLFGRDVSR 541
>gi|224013642|ref|XP_002296485.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968837|gb|EED87181.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 445
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 194/372 (52%), Gaps = 53/372 (14%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
+ C ++ E + E F ISYD+L+ ++G + +TFG GV+E +L++V AQ+I+
Sbjct: 101 ISCTSIVCEGNSCETESFDISYDRLLFSVGGQTTTFGTPGVEEYCNYLKQVGDAQQIKNA 160
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
++ + +P ++EE+ R L V+VG GPTG+EF+ EL DFI D + Y Y+
Sbjct: 161 IVNCFESAGLPNLTEEDMERELTFVIVGAGPTGIEFAAELLDFIESDGPRYYKDRLKYVR 220
Query: 123 VTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLL 180
+ ++E A IL F+D ++ A RL R I ++ V S + +PYG+
Sbjct: 221 IKVVEAAPSILRPFEDGMKEEAIR-------RLTRTIKIQGVGS----IQPCERIPYGMS 269
Query: 181 VWSTGVG----PSTLVKSL------DLPKSPGGRIGIDEWLRVPSVQ-DVFAVGDCSGYL 229
+W+ G+G S+LV+ L + + GR+ +D WLRV +FA+GDCS +
Sbjct: 270 LWAAGIGQLPITSSLVEELKGTEQTNAQQYARGRLAVDPWLRVLGGDGKIFALGDCS-CI 328
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATI 289
ST +LPA AQVA +QG++L LL+R + PF + LG +A
Sbjct: 329 SST--PMLPATAQVAAQQGEFLGKLLSR---------------DYPPPFQFLDLGILAYT 371
Query: 290 GRYKAL--VDLRQNKESKG---------LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 338
G AL V + K+ G L + G L + +WR+ YL + S++N VA++
Sbjct: 372 GSGSALAQVQIAPGKDLPGANENWSPVRLQIKGSLGFGLWRTIYLLKQTSFKNVVLVALD 431
Query: 339 WATTFVFGRDIS 350
W +FGRDIS
Sbjct: 432 WVKVNLFGRDIS 443
>gi|299116714|emb|CBN76274.1| NADH dehydrogenase (ubiquinone) (Partial) [Ectocarpus siliculosus]
Length = 350
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 156/253 (61%), Gaps = 11/253 (4%)
Query: 12 LRTLEPWK---FKISYDKLVIALGAEASTFGIHGVKE--NATFLREVHHAQEIRRKLLLN 66
LR E +K ++ YD LVIA GA+ +TFG+ GV E + FL+++ A+ IR +LL
Sbjct: 98 LRCQEVFKGTEHEVDYDSLVIATGAQNNTFGVPGVSEENHVFFLKQLGDARNIRNRLLEC 157
Query: 67 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI 126
+ P ISEEE+SRLL VVVGGGPT +E++ EL DF+ DV++ Y ++ + V L+
Sbjct: 158 FERAASPFISEEERSRLLSFVVVGGGPTSIEYAAELHDFLRTDVKRWYPDLEHKVSVHLV 217
Query: 127 EANE-ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWST 184
EA++ I+ SFD++L Y T L V L+ V V + L DG ++P+GL+VWST
Sbjct: 218 EASDHIMGSFDEKLISYTTRLLENRKVEVLLNTSVASVGPTECTLGDGRKLPFGLIVWST 277
Query: 185 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
G+ P+ LV S++ + GRI ID LRVP + VFA+GD + E+ L LAQVA
Sbjct: 278 GLAPTELVSSMEGVEKERGRINIDGRLRVPGMDGVFAMGDAAANPENP----LGPLAQVA 333
Query: 245 ERQGKYLFSLLNR 257
++QGKYL ++
Sbjct: 334 DQQGKYLAKCFSK 346
>gi|452845458|gb|EME47391.1| hypothetical protein DOTSEDRAFT_122942 [Dothistroma septosporum
NZE10]
Length = 583
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 194/374 (51%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I +D LV+ +GAE +TFGI GV+E+ FL+EV AQ IR++++ + S EEK
Sbjct: 218 EIPFDMLVVGVGAENATFGIPGVREHGCFLKEVGDAQRIRKRIMDCCETATFKDQSIEEK 277
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + HVTL+EA +L SF L
Sbjct: 278 KRLLHMVVVGGGPTGVEFAGELQDFFEHDLKKWIPEIAGDFHVTLVEALPSVLPSFSKNL 337
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + +V+ + D + DG + +PYGLLVW+TG
Sbjct: 338 IDYTEKTFKEETIDIRTKTMVKNVTSDYIEAEFTGPDGKKQIEKIPYGLLVWATGNAVRP 397
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+VK L +P R G ++E+L V ++++AVGDC+ + + T AQVA +
Sbjct: 398 VVKDLMNQIPAQKDARRGLNVNEYLVVKGAENIWAVGDCA--VANYAPT-----AQVASQ 450
Query: 247 QGKYLFSLLNRIGK-----------------AGGGRANSAKDMELGD------------P 277
+G +L L N++ K A A E+ D P
Sbjct: 451 EGAFLARLFNQMAKTEEIEVQLAVLSEEQAKAANKEARDHVFSEIKDLQKRLRRVKQMGP 510
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GSMA IG KA+ D+ + + L+ G L++ W+SAYL+ S RNR V +
Sbjct: 511 FEYSHQGSMAYIGSEKAVADI--SWLTGNLASGGQLTYFFWKSAYLSMCFSTRNRVLVFM 568
Query: 338 NWATTFVFGRDISR 351
+W ++ FGRD+SR
Sbjct: 569 DWIKSYCFGRDVSR 582
>gi|171685906|ref|XP_001907894.1| hypothetical protein [Podospora anserina S mat+]
gi|170942914|emb|CAP68567.1| unnamed protein product [Podospora anserina S mat+]
Length = 582
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 201/374 (53%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE +TFGI GV+E++ FL+E+ AQ IR++++ + + S EE
Sbjct: 219 EVPYDMLVVGVGAENATFGIPGVREHSCFLKEIGDAQRIRKRIMDCVETAAFKDQSPEEI 278
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 279 DRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISDRFRVTLIEALPNVLPSFSKQL 338
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + + DGT+ PYGLLVW+TG
Sbjct: 339 IEYTESTFKEEKINIHTKTMVKKVTDKTVEAVATRPDGTKETIVFPYGLLVWATGNAVRP 398
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 399 VVQDLMQRIPAQKNSRRGLAVNEYLVVQGARDIWAVGDCAVAGYAPT---------AQVA 449
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------P 277
++G +L L N + + G A ++++E + P
Sbjct: 450 SQEGNFLARLFNNMARTEALENKIAELSGSLNLQPGNTAEISREIEEYERQLRRIKDVKP 509
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + ++ AG L++L WRSAY++ S RNR V
Sbjct: 510 FHYSHQGSLAYIGSEKAVADV--TWFNGNVAAAGGLTYLFWRSAYISMCFSTRNRLLVIN 567
Query: 338 NWATTFVFGRDISR 351
+W + +FGRD+SR
Sbjct: 568 DWLKSKLFGRDLSR 581
>gi|366987145|ref|XP_003673339.1| hypothetical protein NCAS_0A03930 [Naumovozyma castellii CBS 4309]
gi|342299202|emb|CCC66951.1| hypothetical protein NCAS_0A03930 [Naumovozyma castellii CBS 4309]
Length = 542
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 211/357 (59%), Gaps = 36/357 (10%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+ ++ YD LV+ +GA+++TF I GV ENA FL+E+ +++IR K+L N+ + +
Sbjct: 196 ELQLDYDYLVVGIGAQSTTFNIPGVYENANFLKEISDSEKIRLKVLKNIETASFLKKDDP 255
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E+ RLL+ VVVGGGPTGVEF+ EL+D++ +D+++ + I VTL+EA IL+ F+
Sbjct: 256 ERQRLLNFVVVGGGPTGVEFAAELNDYVSQDLKKWLPDISKDIKVTLVEALPNILNMFEK 315
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-DGTEV--PYGLLVWSTGVGPSTLVK 193
L Y T L K + L ++ +V+ VD + DG EV PYG+LVW+TG P+ L K
Sbjct: 316 SLIDYTQTFLQKENIDLKLKTMVQSVDENIVTAKMDGKEVEIPYGVLVWATGNAPTQLAK 375
Query: 194 SL--DLPK---SPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+ DL + SP G + I++ L++ +D VFA+GDC+ + + P AQVA ++
Sbjct: 376 KMMNDLKEEQTSPRGLL-INDRLQMLGAEDSVFAIGDCTFH-----PGLFPT-AQVAHQE 428
Query: 248 GKYL---FSLLNRIGKA----GGGRANSAKDM-----ELGDPFVYRHLGSMATIGRYKAL 295
G YL F LL+++ + ++ K++ +L +PF Y H G+++ IG +A+
Sbjct: 429 GGYLAEQFKLLHQLDQCKWEMNTANTDNTKELNKLENKLNEPFKYIHRGTLSYIGAERAI 488
Query: 296 VDLR--QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
V+L NK + G ++ W++ YL+ +S++NR VA +W T+ FGRD S
Sbjct: 489 VELTIGDNK----FKMHGPFAFWFWKTVYLSMCLSFKNRALVAFDWCKTYFFGRDSS 541
>gi|406603829|emb|CCH44688.1| External NADH-ubiquinone oxidoreductase 1,mitochondrial
[Wickerhamomyces ciferrii]
Length = 549
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 199/359 (55%), Gaps = 36/359 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV A+GA+ +TFG GV E+A+FL+E+ +QEIR K+L ++ + ++ E++
Sbjct: 197 LHYDYLVCAVGAQPNTFGTPGVYEHASFLKEISDSQEIRHKVLNSIEKASALPKNDPERA 256
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VVVGGGPTGVEF+GEL DF+ +D+ + Y + I V+L+EA IL+ F+ +L
Sbjct: 257 RLLSFVVVGGGPTGVEFAGELQDFVDQDLVKWYPEISKEIKVSLVEALPNILNMFNKKLI 316
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTGVGPSTL 191
Y S+ + L ++ +VK VD +K+ +DGT E+PYG+LVW+TG G +
Sbjct: 317 KYTEDVFSEENISLKLQTMVKKVDDKKITASIKNSDGTTSIEEIPYGVLVWATGNGGREI 376
Query: 192 VKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
K++ L G ID++L+ +FAVGDC + P AQ A +
Sbjct: 377 TKNIAGQLEGQTFANRGLIIDDYLKAVGSDSIFAVGDC-----VLSRKFAPT-AQAAYQH 430
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELG---------------DPFVYRHLGSMATIGRY 292
G YL L + K + + E +PF + +LGS+A IG
Sbjct: 431 GIYLSKLFKNLAKIDSHKYKLEQTPEASEKAKILSKIDKISNFEPFQFVYLGSLAYIGSE 490
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+A+ DL SK LSL G L++L W+SAY+ +S+RNR V ++W +FGRD S+
Sbjct: 491 RAIADLSWGNWSK-LSLGGSLTFLFWKSAYVGMCLSFRNRCLVVLDWVKVSIFGRDSSK 548
>gi|239613720|gb|EEQ90707.1| alternative NADH-dehydrogenase [Ajellomyces dermatitidis ER-3]
Length = 614
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 199/374 (53%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE STFGI GV+E++ FL+EV AQEIR++++ + + ++EE
Sbjct: 249 EVPYDMLVVGVGAENSTFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTKEEV 308
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTL+EA +L +F +L
Sbjct: 309 KRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEITDNFKVTLVEALPNVLPTFSKQL 368
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + + DGT+ +PYGLLVW+TG
Sbjct: 369 IDYTESTFKEEAITIRTKTMVKKVSDKYIEAESTNPDGTKEMETIPYGLLVWATGNTVRG 428
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 429 VVRDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTAQVASQ 481
Query: 247 QGKYLFSLLNRIGKAGG----------GRANSAKDMELGD-------------------P 277
+G +L L N + K +A + + E P
Sbjct: 482 EGAFLARLFNTMAKTAAIEDELKALSKAQAEAPTEEERNKVLDEIRNLQRTLRRTKQIGP 541
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR VA
Sbjct: 542 FQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNRVLVAF 599
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 600 DWIKAKMFGRDVSR 613
>gi|327350106|gb|EGE78963.1| alternative NADH-dehydrogenase [Ajellomyces dermatitidis ATCC
18188]
Length = 587
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 199/374 (53%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE STFGI GV+E++ FL+EV AQEIR++++ + + ++EE
Sbjct: 222 EVPYDMLVVGVGAENSTFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTKEEV 281
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTL+EA +L +F +L
Sbjct: 282 KRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEITDNFKVTLVEALPNVLPTFSKQL 341
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + + DGT+ +PYGLLVW+TG
Sbjct: 342 IDYTESTFKEEAITIRTKTMVKKVSDKYIEAESTNPDGTKEMETIPYGLLVWATGNTVRG 401
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 402 VVRDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTAQVASQ 454
Query: 247 QGKYLFSLLNRIGKAGG----------GRANSAKDMELGD-------------------P 277
+G +L L N + K +A + + E P
Sbjct: 455 EGAFLARLFNTMAKTAAIEDELKALSKAQAEAPTEEERNKVLDEIRNLQRTLRRTKQIGP 514
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR VA
Sbjct: 515 FQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNRVLVAF 572
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 573 DWIKAKMFGRDVSR 586
>gi|50556896|ref|XP_505856.1| YALI0F25135p [Yarrowia lipolytica]
gi|378548409|sp|F2Z699.1|NDH2_YARLI RecName: Full=External alternative NADH-ubiquinone oxidoreductase,
mitochondrial; AltName: Full=External alternative NADH
dehydrogenase; AltName: Full=NADH:ubiquinone reductase
(non-electrogenic); Flags: Precursor
gi|3718005|emb|CAA07265.1| alternative NADH-dehydrogenase [Yarrowia lipolytica]
gi|49651726|emb|CAG78667.1| YALI0F25135p [Yarrowia lipolytica CLIB122]
Length = 582
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 192/375 (51%), Gaps = 52/375 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I +D LV+ +GA +STFGI GV+ENA FL+E+ AQ+IRR L+ + + E K
Sbjct: 215 EIPFDYLVVGVGAMSSTFGIPGVQENACFLKEIPDAQQIRRTLMDCIEKAQFEKDPEVRK 274
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+ EL DF D+R+ ++D VTL+EA +L SF +L
Sbjct: 275 -RLLHTVVVGGGPTGVEFAAELQDFFEDDLRKWIPDIRDDFKVTLVEALPNVLPSFSKKL 333
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKL----ILNDGT----EVPYGLLVWSTGVGPST 190
Y S + L + +VK VD + DGT E+PYG LVW+TG
Sbjct: 334 IDYTEKTFSDEKISILTKTMVKSVDENVIRAEQTKGDGTKETLEMPYGTLVWATGNTVRP 393
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P G R G ++E+L V + ++A+GDCS T AQVA +
Sbjct: 394 VVRELMSKIPAQKGSRRGLLVNEYLVVEGTEGIWALGDCSA-------TKYAPTAQVASQ 446
Query: 247 QGKYLFSLLNRIGKAGG-------------------GRANSAKDMELGD----------P 277
+G YL +LLN I K R N +E P
Sbjct: 447 EGSYLANLLNGIAKTEDLNNEITNLEKQSEHTFDEQERKNIFAQLESKSRKLRRSRAMLP 506
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKES-KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
F Y H GS+A IG +A+ DL N S G +++ WRSAY++ S RN+ V
Sbjct: 507 FEYSHQGSLAYIGSDRAVADLSFNFWGIMNWSSGGTMTYYFWRSAYVSMCFSMRNKILVC 566
Query: 337 VNWATTFVFGRDISR 351
++W VFGRDISR
Sbjct: 567 IDWMKVRVFGRDISR 581
>gi|261193911|ref|XP_002623361.1| alternative NADH-dehydrogenase [Ajellomyces dermatitidis SLH14081]
gi|239588966|gb|EEQ71609.1| alternative NADH-dehydrogenase [Ajellomyces dermatitidis SLH14081]
Length = 587
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 199/374 (53%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE STFGI GV+E++ FL+EV AQEIR++++ + + ++EE
Sbjct: 222 EVPYDMLVVGVGAENSTFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTKEEV 281
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTL+EA +L +F +L
Sbjct: 282 KRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEITDNFKVTLVEALPNVLPTFSKQL 341
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + + DGT+ +PYGLLVW+TG
Sbjct: 342 IDYTESTFKEEAITIRTKTMVKKVSDKYIEAESTNPDGTKEMETIPYGLLVWATGNTVRG 401
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 402 VVRDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTAQVASQ 454
Query: 247 QGKYLFSLLNRIGKAGG----------GRANSAKDMELGD-------------------P 277
+G +L L N + K +A + + E P
Sbjct: 455 EGAFLARLFNTMAKTAAIEDELKALSKAQAEAPTEEERNKVLDEIRNLQRTLRRTKQIGP 514
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR VA
Sbjct: 515 FQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNRVLVAF 572
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 573 DWIKAKMFGRDVSR 586
>gi|328857353|gb|EGG06470.1| hypothetical protein MELLADRAFT_43514 [Melampsora larici-populina
98AG31]
Length = 568
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 191/357 (53%), Gaps = 36/357 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV +GAE +TFGI GVKE+ FL+E+ A++IRRKL+ + + ++ E
Sbjct: 220 IKYDYLVYGVGAENNTFGIPGVKEHGCFLKELEDAEKIRRKLMDCVETASFKDQADHEVD 279
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE++ EL DF++ D+ Y + + +TLIEA +L F +L
Sbjct: 280 RLLHMVVVGGGPTGVEYAAELHDFLVDDLSTWYPEIAGKVKITLIEALPNVLPMFSKQLI 339
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKSL 195
Y T + + L + +VK+V + ++ + E+PYGLLVW+TG L + L
Sbjct: 340 DYTTQTFMSNRIEVLTKTMVKEVGPKTIMAQNEKKELIEIPYGLLVWATGNTSRDLTRKL 399
Query: 196 --DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
LP+ + G +D+ LR+ ++A+GDC+ T AQ A +QG+YL
Sbjct: 400 MASLPEHQTQKRGLLVDDHLRLLGADGIYALGDCTA-------TAYAPTAQAASQQGQYL 452
Query: 252 FSLLNRIGKAGG-----GRANSAKDMELGDP------------FVYRHLGSMATIGRYKA 294
N++ K A + +++ D F Y H GS+A IG KA
Sbjct: 453 AKRFNQLAKVEKLEQHLEDAKQSSNVQEIDSITKTLSRNKLREFKYSHQGSLAYIGSEKA 512
Query: 295 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ DL + ++ G ++ WRSAY++ V S+RNRF V +W +FGRD+SR
Sbjct: 513 IADLPFF--NGNIATGGVATFFFWRSAYVSMVFSFRNRFLVCTDWMKVKLFGRDVSR 567
>gi|357125352|ref|XP_003564358.1| PREDICTED: probable NADH-ubiquinone oxidoreductase C3A11.07,
mitochondrial-like [Brachypodium distachyon]
Length = 572
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 174/319 (54%), Gaps = 27/319 (8%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+HC + D +F + YD LV+ +GA +TF GV EN FL+EV AQ+IR+
Sbjct: 139 KIHCRS-GDGTNVDGNGEFAVDYDYLVVTVGARPNTFNTPGVVENCHFLKEVEDAQKIRK 197
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P ++EEE+ + +H VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+
Sbjct: 198 SVMKCFEKAALPNLTEEERKKNVHFVVIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKYV 257
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EV 175
++++IEA + IL+ FD R+ H+A + + G+ L +VK D + N T V
Sbjct: 258 NISVIEAGDHILTMFDKRITHFAEDKFKREGIDLKTNFKVVKVSDKTITMSNPATGEIAV 317
Query: 176 PYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLES 231
PYGL VWSTG+G ++ +D K G + DEWLRV +DV+A+GDC+ +
Sbjct: 318 PYGLAVWSTGIGTRPII--MDFMKQVGQANRRVLATDEWLRVHGCEDVYALGDCATITQR 375
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV-YRHLGSMATIG 290
+ A+ +VA++ +G KD+ LGD +V Y +
Sbjct: 376 KVMEDVDAIFRVADKDN------------SGTLTVKKIKDV-LGDIYVRYPQVELYLKTN 422
Query: 291 RYKALVDLRQNKESKGLSL 309
+ K DL ++KES+ L++
Sbjct: 423 QMKGFHDLLKDKESEELNI 441
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIG-----KAGGGRANSAKDMELGDPFVYRHLGSMATIG 290
+LPA AQVA ++G YL NR+ G R A PF YRHLG A +G
Sbjct: 457 LLPATAQVAAQEGAYLADCFNRMNICEESPEGPLRIRGAGRHRF-KPFRYRHLGQFAPLG 515
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 516 GEQTAAQLPGDWIHVGHST----QWL-WYSVYASKQFSWRTRMLVVSDWGRRFIFGRDSS 570
Query: 351 RI 352
+
Sbjct: 571 SL 572
>gi|402077373|gb|EJT72722.1| hypothetical protein GGTG_09580 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 573
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 203/375 (54%), Gaps = 55/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE +TFGI GV+E++ FL+E+ AQ IR+K++ + + + EE
Sbjct: 209 EVPYDMLVVGVGAENATFGIPGVREHSCFLKEIGDAQFIRKKIMDCVETAAFKDQTPEEI 268
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVEF+GEL+DF D+R+ + D VTL+EA +L SF +L
Sbjct: 269 DRLLSVVVVGGGPTGVEFAGELADFFEEDIRKLIPEISDRFRVTLVEALPSVLPSFSKQL 328
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGTE----VPYGLLVWSTGVGPST 190
Y + L + +++ + +V+ V + + DGT+ +PYGLLVW+TG
Sbjct: 329 IEYTESTLKEEKIQIETKTMVQKVTDKTVEATTTRPDGTKERRVLPYGLLVWATGNAVRP 388
Query: 191 LVKSL--DLPKSPGGRIGI--DEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
LVK L +P R G+ +E+L V +D++A+GDC +GY+ + AQVA
Sbjct: 389 LVKDLCARIPAQKDSRRGLATNEYLVVQGARDIWAIGDCAVAGYVPT---------AQVA 439
Query: 245 ERQGKYLFSLLNRIGKAGGGRA-----NSAKDMELG-----------------------D 276
++G +L L N + K A +S+ +++ G
Sbjct: 440 SQEGAFLARLFNNMAKTEAVEARIQDLSSSLNLKPGVNAAEISAQIAEHERKLRRVKDIK 499
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG KA+ D+ + + G L++L WRSAYL+ S RNR V
Sbjct: 500 PFHYSHQGSLAYIGSDKAVADI--SWLDGNFATGGRLTYLFWRSAYLSMCFSGRNRILVI 557
Query: 337 VNWATTFVFGRDISR 351
+W + +FGRD+SR
Sbjct: 558 NDWLKSKLFGRDVSR 572
>gi|346971407|gb|EGY14859.1| external NADH-ubiquinone oxidoreductase [Verticillium dahliae
VdLs.17]
Length = 544
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 199/373 (53%), Gaps = 62/373 (16%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
I YDKLV+A+G+ + TFGI GV+E+A FLR+V A+ IR ++L + +P + E+
Sbjct: 194 ISIPYDKLVVAVGSYSQTFGIPGVREHANFLRDVGDARSIRLRVLQCFERAALPTATPEQ 253
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEANE----ILS 133
+ LLH VVGGGPTG+EF+ EL D +R R V D + H L ++++ +
Sbjct: 254 RRALLHFAVVGGGPTGIEFAAELHDPHLRGPRPPLPPV-DALGGHHRLRQSSQGGGHCST 312
Query: 134 SFDDRLR---HYATTQLSKSGVRLVRGIVKDVDSQ----KLILND--GTEVPYGLLVWST 184
S R+ A +SK+ L + I +D S KL + + G EV LLVWST
Sbjct: 313 SSSPRMPLTCSSARASISKTEHHLTQ-IRQDDQSPHGALKLSIQEEPGAEVGARLLVWST 371
Query: 185 GVGPSTLV-----KSLDLP----KSPG-------GRIG---IDEWLRVP------SVQDV 219
G+ P+ LV + L LP SP GR G D+ LR+ +++DV
Sbjct: 372 GLMPNPLVQKMVARELRLPGSGDSSPPETFHLQTGRSGGLLTDDHLRLRLDQGDRTLRDV 431
Query: 220 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV 279
FA+GDC+ + LPA AQVA +Q YL LNR G D+ PF
Sbjct: 432 FAMGDCA----VMDREALPATAQVASQQAVYLARTLNRHGD----------DVSRAKPFA 477
Query: 280 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+R+LG+MA +G ++A+ +S L G L+W++WR AYLT +S RN+ V V+W
Sbjct: 478 WRNLGTMAYLGSWRAI------HQSSADGLRGRLAWVLWRGAYLTMSMSVRNKIMVPVHW 531
Query: 340 ATTFVFGRDISRI 352
T+VFGRDISR
Sbjct: 532 FMTWVFGRDISRF 544
>gi|119495020|ref|XP_001264306.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Neosartorya fischeri NRRL 181]
gi|119412468|gb|EAW22409.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Neosartorya fischeri NRRL 181]
Length = 545
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 193/389 (49%), Gaps = 73/389 (18%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I YDKLVIA+G TF GV+ENA F +++ A+ +RR++ L+ +P + E
Sbjct: 172 FSIPYDKLVIAVGTVTKTFNTPGVRENALFFKDIGDARRVRRRVRECFELAVLPTTAPEM 231
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LLH +VG GPTG E + L DFI RD+ Q Y + +TL + A +LS FD+R
Sbjct: 232 RKWLLHFAIVGAGPTGTELAASLRDFIYRDLMQLYPSLAGIPRITLYDVAPTVLSMFDER 291
Query: 139 LRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGTEVPYGLLV 181
L YA + K G+ + V G+ ++D ++ L + EV G+ V
Sbjct: 292 LAAYAMETMKKEGITIKTSHHVAGLRWGPPGATPPYEMDPKRCLTLTTKEEGEVGVGMCV 351
Query: 182 WSTG---------------VGP--STLVK---------SLDLPKSPGGRIGIDEWLRV-- 213
W+TG V P S L K S + K P G + +D LRV
Sbjct: 352 WATGNKMNEFVRNSLEEVDVFPSASALAKGEKIKEENASWKVKKGPNGALLVDGRLRVQL 411
Query: 214 -------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRA 266
++DVFA+GD + + TG PA AQ ++ K+L + LN
Sbjct: 412 ASDNGETAILRDVFALGDNA--MPETGAP--PATAQATFQEAKWLAARLN---------- 457
Query: 267 NSAKDMELGDPFVYRHLGSMATIGRYKALVDL--RQNKESKGLS--LAGFLSWLVWRSAY 322
A D+E PF +R++G++A IG +AL+ L + K L L G ++WLVW SAY
Sbjct: 458 --ADDIEQAPPFSFRNMGTLAYIGDARALMQLPHEDGRRYKYLPHGLTGRMAWLVWNSAY 515
Query: 323 LTRVVSWRNRFYVAVNWATTFVFGRDISR 351
LT +SWRNR VA W +FGRD+SR
Sbjct: 516 LTMSISWRNRLRVAFRWLLNNLFGRDVSR 544
>gi|452002441|gb|EMD94899.1| hypothetical protein COCHEDRAFT_1090889 [Cochliobolus
heterostrophus C5]
Length = 577
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 190/409 (46%), Gaps = 93/409 (22%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F ++YDKL++ +G + TFG GVKE+A FL++V A+ IR ++L + +P +
Sbjct: 186 FDVNYDKLIVTVGCYSQTFGTPGVKEHAFFLKDVGDARRIRNRILACFEGAALPTTPVDM 245
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LL+ VVGGGPTG+EFS EL D I D+++ Y + Y +T+ + A ++L FD +
Sbjct: 246 KRQLLNFAVVGGGPTGIEFSAELHDLINEDLKKLYPELIQYHKITVYDVAEKVLPMFDKK 305
Query: 139 LRHYATTQLSKSGVRLVRG------------------IVKDVDSQKLILNDGTEVPYGLL 180
L YA + + G+ + V+D L + + E+ G+
Sbjct: 306 LADYAMQKFKREGIDIKTSHHVEELRAGAPVETSNSETVQDSHLYTLKVKEQGEIGVGMC 365
Query: 181 VWSTGV---------------GPSTLVKSLDL-----------PKSPGGRIGIDEWLRVP 214
VWSTG+ PS L+ + G I D LRV
Sbjct: 366 VWSTGLMQNPFVHTALSSVRSAPSNLITPSSSPSPSSIQWTVKKDAKSGSIITDSHLRVK 425
Query: 215 SV-------------------------------QDVFAVGDCSGYLESTGKTVLPALAQV 243
V DVFA+GDC G +++T PA AQV
Sbjct: 426 LVPASSSSSSSSSSPADKDSTEAATADKTEAIHPDVFALGDC-GTIDATN---YPATAQV 481
Query: 244 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303
A ++ +L LN ++++ D G F YR LG++A IG + AL Q
Sbjct: 482 ASQKAVWLAKQLN--------KSSTLADSPKG--FTYRDLGTLAYIGNWNALF---QGGG 528
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L G+++W++WR AY+TR VS RN+ V V W +VFGRDISR
Sbjct: 529 KWGGRLQGYVAWIIWRGAYITRTVSLRNKVLVPVYWVVNWVFGRDISRF 577
>gi|326473639|gb|EGD97648.1| alternative NADH-dehydrogenase [Trichophyton tonsurans CBS 112818]
gi|326480766|gb|EGE04776.1| external NADH-ubiquinone oxidoreductase [Trichophyton equinum CBS
127.97]
Length = 597
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 204/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA+ +TFGI GV+E++ FL+EV AQ+IR +++ + + +++E
Sbjct: 232 QVPFDLLVVGVGAQNATFGIPGVQEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTQDEI 291
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +F +L
Sbjct: 292 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFQVTLVEALPNVLPTFSKQL 351
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y + + +++ G +VK+V + ++ DG+ ++PYGLLVW+TG
Sbjct: 352 IDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATGNAVRD 411
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 412 VVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQ 464
Query: 247 QGKYLFSLLNRIGKAG---------GGRANSAKD--------------------MELGDP 277
+G +L L N + K + AKD M+ P
Sbjct: 465 EGAFLARLFNTMAKTDQIEKELSHLSVAQSEAKDDSDRNKILDEIRALQQQMRRMKQVGP 524
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR V V
Sbjct: 525 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVVV 582
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 583 DWLKAKLFGRDVSR 596
>gi|310790145|gb|EFQ25678.1| hypothetical protein GLRG_00822 [Glomerella graminicola M1.001]
Length = 421
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 188/360 (52%), Gaps = 36/360 (10%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V C+T + T P F+I YDK+ IA G FG G E+A FLR A+ I+R+
Sbjct: 86 VRCKT---DPPTTTPASFEIRYDKICIAPGCATQDFGTPGAAEHAVFLRTTDDARAIQRR 142
Query: 63 LLLNLMLSDVPGISEEEKSRL--LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
+L L + +P ++ + R L+ +VGGG G+E + EL D ++R + H+
Sbjct: 143 ILQMLDTASLPTMANRAQDRRDSLNIRIVGGGAVGLEAAAELWDLWFEELRFLFPHLDGE 202
Query: 121 IHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYG 178
+ +T+ + A ILS+FD RL YAT L VR++ ++ V++ + + +PYG
Sbjct: 203 LTITIHDVAPTILSTFDARLSEYATRSLEGKQVRIMTSSHIERVEADAIYTKEDGRLPYG 262
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGG--RIGIDEWLRV-----PSVQDVFAVGDCSGYLES 231
LL+W+TG S LV L + K G RI D++LRV ++D +A+GD + +
Sbjct: 263 LLIWATGNKASPLVDRLPVKKPEHGLPRILTDKYLRVLRPDGSPMEDAYALGDAA---DI 319
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGR 291
G++ LP LA+VA ++G+YL +L NS D PF+Y+ +A +GR
Sbjct: 320 EGES-LPTLAEVALQKGEYLTGVL-----------NSDDDSVRPAPFIYKQRALLAYLGR 367
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ ++ RQ G +W+ WRS L SWR + +A+ WA +V GRDI+R
Sbjct: 368 HDGVIAGRQE-------WTGASAWIAWRSGSLGWTRSWRRKIMIAIYWAFVWVAGRDIAR 420
>gi|190346286|gb|EDK38335.2| hypothetical protein PGUG_02433 [Meyerozyma guilliermondii ATCC
6260]
Length = 573
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 194/366 (53%), Gaps = 51/366 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV+ ++ FL+E+ A IRR+L+ + +++ +EE+
Sbjct: 222 LNYDYLVVGVGAQPSTFGIPGVETHSVFLKEISDAVTIRRRLMDLIEAANILPKGDEERK 281
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GEL D+I +D+++ V + +TL+EA ++L++F ++L
Sbjct: 282 RLLSVVVCGGGPTGVEVAGELQDYIDQDLKKWMPEVSSELKITLVEALPQVLNTFSEKLV 341
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLI-------LNDGTEVPYGLLVWSTGVGPSTLV 192
Y + + L ++K VD + ++ ++ E PYG+L+W+TG P +V
Sbjct: 342 EYTEQVFQDTNIDLRTNTMIKKVDDRMVMGTHKVNGKDEYVEFPYGMLIWATGNAPRGIV 401
Query: 193 KSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+SL D ++ + +D+ L V +++A+GDC+ T AQVA ++G
Sbjct: 402 RSLISKIDEQRNAKRGLLVDDRLLVDGTNNIYALGDCTF-------TKYAPTAQVAFQEG 454
Query: 249 KYL---FSLLNRIGKAGGGRANSAKDMELGDP--------------------FVYRHLGS 285
+L F L+ I +E DP F Y H GS
Sbjct: 455 IFLGKHFEELHEIDTL-------KYKLEHPDPKDNVERLTKKLNRLQAKLPIFHYNHQGS 507
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG +A+ DL S +S G +++L WRSAY+ +S +N+ V ++W +F
Sbjct: 508 LAYIGSERAVADLVWGDWS-NVSTGGTITFLFWRSAYIYMCLSIKNQILVCMDWLKVSMF 566
Query: 346 GRDISR 351
GRD S+
Sbjct: 567 GRDCSK 572
>gi|327299766|ref|XP_003234576.1| alternative NADH-dehydrogenase [Trichophyton rubrum CBS 118892]
gi|326463470|gb|EGD88923.1| alternative NADH-dehydrogenase [Trichophyton rubrum CBS 118892]
Length = 607
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 204/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA+ +TFGI GV+E++ FL+EV AQ+IR +++ + + +++E
Sbjct: 242 QVPFDLLVVGVGAQNATFGIPGVQEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTQDEI 301
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +F +L
Sbjct: 302 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFQVTLVEALPNVLPTFSKQL 361
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + +++ G +VK+V + ++ DG++ +PYGLLVW+TG
Sbjct: 362 IDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIERIPYGLLVWATGNAVRD 421
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 422 VVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQ 474
Query: 247 QGKYLFSLLNRIGKAG---------GGRANSAKD--------------------MELGDP 277
+G +L L N + K + AKD M+ P
Sbjct: 475 EGAFLARLFNTMAKTDQIEKELSHLSVAQSEAKDDSDRNKILDEIRALQQQMRRMKQVGP 534
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR V V
Sbjct: 535 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVVV 592
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 593 DWLKAKLFGRDVSR 606
>gi|367027384|ref|XP_003662976.1| hypothetical protein MYCTH_2304268 [Myceliophthora thermophila ATCC
42464]
gi|347010245|gb|AEO57731.1| hypothetical protein MYCTH_2304268 [Myceliophthora thermophila ATCC
42464]
Length = 523
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 199/394 (50%), Gaps = 80/394 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP----GI 75
+I YDKLVIA GA + TFGI GV+E A FLR++ A+ IR ++L P +
Sbjct: 149 IEIPYDKLVIACGAYSQTFGIEGVREYAHFLRDIGDARRIRLRVLSLFEQCAYPRGSDHL 208
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSS 134
S+++K +LLH +VGGGPTG+EF+ EL D I D+ Y + + +T+ + A ++L
Sbjct: 209 SDDDKRQLLHFAIVGGGPTGIEFAAELHDLIRDDLAPIYPELAPLVSITVYDVAPKVLPM 268
Query: 135 FDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDG------------------TEVP 176
FD L YA S+ ++ + + ++L L DG EV
Sbjct: 269 FDRALAKYAMDTFSRQNIK----VKTEHHLERLRLADGELGRRRGVLKIKIKEYGDEEVG 324
Query: 177 YGLLVWSTGVGPSTLV-----KSLDLP------KSPG-----------GRIGIDEWLRVP 214
GL+VWSTG+ P+ L+ K L LP SP G I D +LR
Sbjct: 325 AGLVVWSTGLMPNPLIAKLAAKRLPLPGANPLSTSPPTTRHLLRDARTGGILTDAYLRAR 384
Query: 215 S----------------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ ++DV+ +GDC+ +E+ LP AQVA +Q YL LNR
Sbjct: 385 TTTSTSEPGSAPEPDGVLEDVYVIGDCA-VMEN--DRTLPKTAQVASQQATYLAKALNRA 441
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
AGGG K PF +R+ G++ +G +KA+ +S+ L G+++W+VW
Sbjct: 442 AAAGGGGGAEDK------PFRFRNWGTLTYLGSWKAI------HQSQADELKGWVAWVVW 489
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
R AYLT+ +SWRN+ V + W +++FGR ISR
Sbjct: 490 RGAYLTKSMSWRNKLLVPIYWVVSWIFGRGISRF 523
>gi|389639362|ref|XP_003717314.1| hypothetical protein MGG_06276 [Magnaporthe oryzae 70-15]
gi|351643133|gb|EHA50995.1| hypothetical protein MGG_06276 [Magnaporthe oryzae 70-15]
gi|440465401|gb|ELQ34724.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Magnaporthe oryzae Y34]
gi|440480716|gb|ELQ61366.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Magnaporthe oryzae P131]
Length = 587
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 199/376 (52%), Gaps = 56/376 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GAE +TFGI GV+E++ FL+E+ AQ IR+K++ + + + EE
Sbjct: 222 EVPYDMLVVGVGAENATFGIPGVREHSCFLKEIGDAQLIRKKIMDCVETAAFKDQTPEEI 281
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVEF+GEL+DF D+++ + D VTL+EA +L SF +L
Sbjct: 282 DRLLSVVVVGGGPTGVEFAGELADFFEEDIKKLIPEISDRFKVTLVEALPSVLPSFSKQL 341
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGTE----VPYGLLVWSTGVGPST 190
Y + L + + + + +V+ V + + DGT+ +PYGLLVW+TG
Sbjct: 342 IEYTESTLKEEKINIETKTMVQKVTDKSVEATTTRPDGTKEKRVMPYGLLVWATGNAVRP 401
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
LVK L +P R G ++E+L V +D++A+GDC +GY G T AQVA
Sbjct: 402 LVKDLCARIPAQKDSRRGLAVNEYLVVQGARDIWAIGDCAVAGY----GPT-----AQVA 452
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD----------- 276
++G +L L N + RA + E+ +
Sbjct: 453 SQEGAFLARLFNNMAMTETLETKIQELSSSLNVKQADRAPAEVSAEIAEYERKLRRIKDI 512
Query: 277 -PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
PF Y H GS+A IG KA+ D+ + + G L++L WRSAYL+ S RNR V
Sbjct: 513 RPFKYSHQGSLAYIGSDKAVADI--SWLDGNFATGGRLTYLFWRSAYLSMCFSARNRILV 570
Query: 336 AVNWATTFVFGRDISR 351
+W + +FGRD+SR
Sbjct: 571 INDWVKSKIFGRDVSR 586
>gi|320591428|gb|EFX03867.1| alternative NADH-dehydrogenase [Grosmannia clavigera kw1407]
Length = 597
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 201/375 (53%), Gaps = 55/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LV+ +GAE +TFGI GV EN+ FL+E+ AQ IR+K++ + + + + EE
Sbjct: 233 EVAYDMLVVGVGAENATFGIPGVLENSCFLKEIGDAQRIRKKIMDCVETAALKDQTSEEI 292
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L SF +L
Sbjct: 293 DRLLHMVVVGGGPTGVEFAGELHDFFEDDIKKLIPDIADRFRVTLIEALPNVLPSFSKQL 352
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + + DG++ PYGLLVW+TG
Sbjct: 353 IDYTESTFKEEEIAIHTKTMVKKVTDKAVEAEASRPDGSKERVVFPYGLLVWATGNALRP 412
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+V+ L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 413 VVRDLMGRIPAQKDSRRGLAVNEYLVVQGARDIWAVGDCAVAGYAPT---------AQVA 463
Query: 245 ERQGKYLFSLLNRIGKA------------------GGGRANSAKDMELGD---------- 276
++G +L L N + + G +++++E +
Sbjct: 464 SQEGAFLARLFNNMARTAVLEDRVRTLSASLNLQPGTDAPTASREIEEAERQLRRIKDIK 523
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG KA+ D+ + + G +++L WRSAYL+ V S RNR V
Sbjct: 524 PFHYSHQGSLAYIGSEKAVADIAWF--NGNFASGGSMTFLFWRSAYLSMVFSSRNRLLVI 581
Query: 337 VNWATTFVFGRDISR 351
+W + +FGRDISR
Sbjct: 582 NDWIKSKLFGRDISR 596
>gi|297803260|ref|XP_002869514.1| hypothetical protein ARALYDRAFT_913700 [Arabidopsis lyrata subsp.
lyrata]
gi|297315350|gb|EFH45773.1| hypothetical protein ARALYDRAFT_913700 [Arabidopsis lyrata subsp.
lyrata]
Length = 573
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 148/235 (62%), Gaps = 12/235 (5%)
Query: 2 KVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KVHC V D+ + +F + YD L++A+GA+ +TFG GV EN FL+EV AQ IR
Sbjct: 136 KVHCRPVFKDDPEARQ--EFSLGYDYLIVAVGAQVNTFGTPGVLENCHFLKEVEDAQRIR 193
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +PG++EE++ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VK+
Sbjct: 194 RGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKEL 253
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDGT-- 173
+ +TLI++ + IL+SFD+R+ +A + ++ G+ + G+ V D D + + G
Sbjct: 254 VKITLIQSGDHILNSFDERISSFAEQKFTRDGIDVQTGVRVMSVTDKDISVKVKSSGEVI 313
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+P+GL++WSTGVG ++ GGR + +EWL+V ++V+AVGDC+
Sbjct: 314 SIPHGLILWSTGVGTRPVISDFMEQVGQGGRRALATNEWLQVTGCENVYAVGDCA 368
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 229 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHL 283
++S KT LPA AQVA +QG YL NR+ + G R + + PF Y+H
Sbjct: 452 VDSQMKT-LPATAQVAAQQGAYLAKCFNRMEQCKEQPEGPKRFRTGGHHQF-RPFQYKHF 509
Query: 284 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G A +G +A +L + S G S WL W S Y ++ VSWR R V +W +
Sbjct: 510 GQFAPLGGDQAAAELPGDWVSAGRST----QWL-WYSVYASKQVSWRTRALVVSDWTRRY 564
Query: 344 VFGRDISRI 352
+FGRD SRI
Sbjct: 565 IFGRDSSRI 573
>gi|146417471|ref|XP_001484704.1| hypothetical protein PGUG_02433 [Meyerozyma guilliermondii ATCC
6260]
Length = 573
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 194/366 (53%), Gaps = 51/366 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+ +GA+ STFGI GV+ ++ FL+E+ A IRR+L+ + +++ +EE+
Sbjct: 222 LNYDYLVVGVGAQPSTFGIPGVETHSVFLKEISDAVTIRRRLMDLIEAANILPKGDEERK 281
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VV GGGPTGVE +GEL D+I +D+++ V + +TL+EA ++L++F ++L
Sbjct: 282 RLLSVVVCGGGPTGVEVAGELQDYIDQDLKKWMPEVSSELKITLVEALPQVLNTFSEKLV 341
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLI-------LNDGTEVPYGLLVWSTGVGPSTLV 192
Y + + L ++K VD + ++ ++ E PYG+L+W+TG P +V
Sbjct: 342 EYTEQVFQDTNIDLRTNTMIKKVDDRMVMGTHKVNGKDEYVEFPYGMLIWATGNAPRGIV 401
Query: 193 KSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+SL D ++ + +D+ L V +++A+GDC+ T AQVA ++G
Sbjct: 402 RSLISKIDEQRNAKRGLLVDDRLLVDGTNNIYALGDCTF-------TKYAPTAQVAFQEG 454
Query: 249 KYL---FSLLNRIGKAGGGRANSAKDMELGDP--------------------FVYRHLGS 285
+L F L+ I +E DP F Y H GS
Sbjct: 455 IFLGKHFEELHEIDTL-------KYKLEHPDPKDNVERLTKKLNRLQAKLPIFHYNHQGS 507
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A IG +A+ DL S +S G +++L WRSAY+ +S +N+ V ++W +F
Sbjct: 508 LAYIGSERAVADLVWGDWS-NVSTGGTITFLFWRSAYIYMCLSIKNQILVCMDWLKVSMF 566
Query: 346 GRDISR 351
GRD S+
Sbjct: 567 GRDCSK 572
>gi|315052876|ref|XP_003175812.1| external NADH-ubiquinone oxidoreductase 1 [Arthroderma gypseum CBS
118893]
gi|311341127|gb|EFR00330.1| external NADH-ubiquinone oxidoreductase 1 [Arthroderma gypseum CBS
118893]
Length = 602
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 204/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA+ +TFGI GV+E++ FL+EV AQ+IR +++ + + +++E
Sbjct: 237 QVPFDLLVVGVGAQNATFGIPGVQEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTQDEI 296
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+R+ +KD VTL+EA +L +F +L
Sbjct: 297 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLRKWVPDIKDNFQVTLVEALPNVLPTFSKQL 356
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y + + +++ G +VK+V + ++ DG+ ++PYGLLVW+TG
Sbjct: 357 IDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATGNAVRD 416
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 417 VVRDLMGQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQ 469
Query: 247 QGKYLFSLLNRIGK-------------AGGGRANSAKDMELGD----------------P 277
+G +L L N + K A + A ++ D P
Sbjct: 470 EGAFLARLFNTMAKTDQIEQELSHLSVAQSEAKDDADRNKILDEIRALQQQMRRIKQVGP 529
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR V V
Sbjct: 530 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVVV 587
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 588 DWLKAKLFGRDVSR 601
>gi|307136044|gb|ADN33896.1| NADH dehydrogenase [Cucumis melo subsp. melo]
Length = 585
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 137/219 (62%), Gaps = 13/219 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD L+IA+GA+++TF I GV+ENA FL+ V AQ IR+ ++ + +P +SEE
Sbjct: 161 EFSVDYDYLIIAMGAKSNTFNIPGVEENAHFLKGVEDAQRIRQTVIDCFERASLPNLSEE 220
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
EK R LH V+VGGGPTGVEF+ EL DF + D+ Y +KDY+ +TL+EA + IL+ FD
Sbjct: 221 EKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLAALYPSLKDYVKITLLEAGDHILNMFDK 280
Query: 138 RLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
R+ +A + + G+ L G + K++ +++ + +P+G++VWSTG+GP
Sbjct: 281 RITAFAEEKFQRDGIELKTGSMVVKVTDKEISTKERATGEFVSIPFGMVVWSTGIGPRPQ 340
Query: 192 VKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
V +D K G + DEWLRV V+A+GDC+
Sbjct: 341 V--IDFMKQIGQTNRRALATDEWLRVEGCDGVYALGDCA 377
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL S NR+ + + G PF Y+H G A +G
Sbjct: 471 LPATAQVAAQQGEYLASCFNRMDQCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGE 530
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y +++VSWR R V +W FVFGRD SRI
Sbjct: 531 QTAAQLPGDWISIGHST----QWL-WYSVYASKLVSWRTRILVMSDWGRRFVFGRDSSRI 585
>gi|302654255|ref|XP_003018936.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Trichophyton verrucosum HKI 0517]
gi|291182624|gb|EFE38291.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Trichophyton verrucosum HKI 0517]
Length = 565
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 205/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA+ +TFGI GV+E++ FL+EV AQ+IR +++ + + +++E
Sbjct: 200 QVPFDLLVVGVGAQNATFGIPGVQEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTQDEI 259
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +F +L
Sbjct: 260 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFQVTLVEALPNVLPTFSKQL 319
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y + + +++ G +VK+V + ++ DG+ ++PYGLLVW+TG
Sbjct: 320 IDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATGNAVRD 379
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 380 VVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQ 432
Query: 247 QGKYLFSLLNRIGKA--------------GGGRANSAKDMELGD---------------P 277
+G +L L N + K + +S ++ L + P
Sbjct: 433 EGAFLARLFNTMAKTDQIEKELSHLSVAQSEAKDDSDRNKILDEIRALQQQMRRIKQVGP 492
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR V V
Sbjct: 493 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVVV 550
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 551 DWLKAKLFGRDVSR 564
>gi|302496829|ref|XP_003010415.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Arthroderma benhamiae CBS 112371]
gi|291173958|gb|EFE29775.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Arthroderma benhamiae CBS 112371]
Length = 609
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 205/374 (54%), Gaps = 52/374 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA+ +TFGI GV+E++ FL+EV AQ+IR +++ + + +++E
Sbjct: 244 QVPFDLLVVGVGAQNATFGIPGVQEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTQDEI 303
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +F +L
Sbjct: 304 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFQVTLVEALPNVLPTFSKQL 363
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y + + +++ G +VK+V + ++ DG+ ++PYGLLVW+TG
Sbjct: 364 IDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATGNAVRD 423
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 424 VVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQ 476
Query: 247 QGKYLFSLLNRIGKA--------------GGGRANSAKDMELGD---------------P 277
+G +L L N + K + +S ++ L + P
Sbjct: 477 EGAFLARLFNTMAKTDQIEKELSHLSVAQSEAKDDSDRNKILDEIRALQQQMRRIKQVGP 536
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR V V
Sbjct: 537 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVVV 594
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 595 DWLKAKLFGRDVSR 608
>gi|21554177|gb|AAM63256.1| putative NADH dehydrogenase [Arabidopsis thaliana]
Length = 571
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 148/236 (62%), Gaps = 12/236 (5%)
Query: 1 MKVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 59
KVHC V D+ + +F + YD L++A+GA+ +TFG GV EN FL+EV AQ I
Sbjct: 133 QKVHCRPVFKDDPEASQ--EFSLGYDYLIVAVGAQVNTFGTPGVIENCHFLKEVEDAQRI 190
Query: 60 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 119
RR ++ + +PG++EE++ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VK+
Sbjct: 191 RRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKE 250
Query: 120 YIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDG-- 172
+ +TLI++ + IL++FD+R+ +A + ++ G+ + G+ V D D + + G
Sbjct: 251 LVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSGEL 310
Query: 173 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+P+GL++WSTGVG ++ GGR + +EWL+V ++V+AVGDC+
Sbjct: 311 VSIPHGLILWSTGVGTRPVISDFMEQVGQGGRRAVATNEWLQVTGCENVYAVGDCA 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGR 291
LPA AQVA +QG YL NR+ + G R + + PF Y+H G A +G
Sbjct: 457 LPATAQVAAQQGAYLAKCFNRMEQCKELPEGPKRFRTGGHHQF-RPFQYKHFGQFAPLGG 515
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+A +L + S G S WL W S Y ++ VSWR R V +W ++FGRD SR
Sbjct: 516 DQAAAELPGDWVSAGKSA----QWL-WYSIYASKQVSWRTRALVVSDWTRRYIFGRDSSR 570
Query: 352 I 352
I
Sbjct: 571 I 571
>gi|18417151|ref|NP_567801.1| NADH dehydrogenase [Arabidopsis thaliana]
gi|122237632|sp|Q1JPL4.1|NDB1_ARATH RecName: Full=NAD(P)H dehydrogenase B1, mitochondrial; Flags:
Precursor
gi|95147320|gb|ABF57295.1| At4g28220 [Arabidopsis thaliana]
gi|332660055|gb|AEE85455.1| NADH dehydrogenase [Arabidopsis thaliana]
Length = 571
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 148/236 (62%), Gaps = 12/236 (5%)
Query: 1 MKVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 59
KVHC V D+ + +F + YD L++A+GA+ +TFG GV EN FL+EV AQ I
Sbjct: 133 QKVHCRPVFKDDPEASQ--EFSLGYDYLIVAVGAQVNTFGTPGVLENCHFLKEVEDAQRI 190
Query: 60 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 119
RR ++ + +PG++EE++ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VK+
Sbjct: 191 RRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKE 250
Query: 120 YIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDG-- 172
+ +TLI++ + IL++FD+R+ +A + ++ G+ + G+ V D D + + G
Sbjct: 251 LVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSGEL 310
Query: 173 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+P+GL++WSTGVG ++ GGR + +EWL+V ++V+AVGDC+
Sbjct: 311 VSIPHGLILWSTGVGTRPVISDFMEQVGQGGRRAVATNEWLQVTGCENVYAVGDCA 366
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGR 291
LPA AQVA +QG YL NR+ + G R + + PF Y+H G A +G
Sbjct: 457 LPATAQVAAQQGAYLAKCFNRMEQCKELPEGPKRFRTGGHHQF-RPFQYKHFGQFAPLGG 515
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+A +L + S G S WL W S Y ++ VSWR R V +W ++FGRD SR
Sbjct: 516 DQAAAELPGDWVSAGKSA----QWL-WYSVYASKQVSWRTRALVVSDWTRRYIFGRDSSR 570
Query: 352 I 352
I
Sbjct: 571 I 571
>gi|336271599|ref|XP_003350558.1| hypothetical protein SMAC_02271 [Sordaria macrospora k-hell]
gi|380090223|emb|CCC12050.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 563
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 199/398 (50%), Gaps = 81/398 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPG----I 75
F + YDKLVIA GA + TFGI GV+E+A FLR++ A+ IR ++L P +
Sbjct: 182 FDVPYDKLVIACGAYSQTFGIEGVREHANFLRDIGDARRIRLRILSLFEQCAYPKGSGTL 241
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 134
++E+++ LLH +VGGGPTG+EFS EL D I D+ + Y + ++ +T+ + + ++L
Sbjct: 242 TDEDRANLLHFAIVGGGPTGIEFSAELHDLIHDDLAKMYPDLLKFVKITVYDVSPKVLPM 301
Query: 135 FDDRLRHYAT-----------TQLSKSGVRLVRGIVKDVDSQ---KLILNDGTEVPYGLL 180
FD L YA TQ + VRL G + + K+ EV GL+
Sbjct: 302 FDQALSKYAMDAFRRQKIEIRTQHNIERVRLADGKLGSEHGELKLKIKQYGDKEVGAGLV 361
Query: 181 VWSTGVGPSTLVKSL-----DLPKSPGGR------------------IGIDEWLR----- 212
VWSTG+ + L+K L +P SP R I +DE R
Sbjct: 362 VWSTGLMANPLIKQLASKDFAIPISPEDRAEARRPKAKLATDPRTGGILVDEHFRVRIET 421
Query: 213 ------------VPS------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
VP+ ++DVF +GD + +ES + LP AQVA +Q YL +
Sbjct: 422 QAAEQAAKGSEVVPTSGSNSLLRDVFVLGDAA-VIES--QRTLPKTAQVAAQQATYLAKV 478
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
LN+ + D++ F +R+ G M +G +KA+ +++ L G+ +
Sbjct: 479 LNKANEG-------VVDVKNAPGFKFRNWGVMTYLGSWKAIHQGPRDE------LRGWAA 525
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W++WRSAYL + +S RN+F V V W +++FGR ISR
Sbjct: 526 WVLWRSAYLAKSMSLRNKFLVPVYWLVSWIFGRGISRF 563
>gi|7269676|emb|CAB79624.1| putative NADH dehydrogenase [Arabidopsis thaliana]
Length = 559
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 148/236 (62%), Gaps = 12/236 (5%)
Query: 1 MKVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 59
KVHC V D+ + +F + YD L++A+GA+ +TFG GV EN FL+EV AQ I
Sbjct: 133 QKVHCRPVFKDDPEASQ--EFSLGYDYLIVAVGAQVNTFGTPGVLENCHFLKEVEDAQRI 190
Query: 60 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 119
RR ++ + +PG++EE++ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VK+
Sbjct: 191 RRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKE 250
Query: 120 YIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDG-- 172
+ +TLI++ + IL++FD+R+ +A + ++ G+ + G+ V D D + + G
Sbjct: 251 LVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSGEL 310
Query: 173 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+P+GL++WSTGVG ++ GGR + +EWL+V ++V+AVGDC+
Sbjct: 311 VSIPHGLILWSTGVGTRPVISDFMEQVGQGGRRAVATNEWLQVTGCENVYAVGDCA 366
>gi|268318203|ref|YP_003291922.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhodothermus marinus DSM 4252]
gi|262335737|gb|ACY49534.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodothermus marinus DSM 4252]
Length = 449
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 177/326 (54%), Gaps = 22/326 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I +D LV+A GA + FGI G E + L+ + A +R ++ +D E +
Sbjct: 109 RIDFDYLVLAAGATTNYFGIEGAAEYSFSLKTLEDAIALRSHIIRQFEEAD--RHPERIR 166
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
LL+ VVVGGGPTG+E +G L ++ R+ Y H+ + V L+EA + +L+++D+R
Sbjct: 167 EGLLNIVVVGGGPTGIEMAGALVEWFELVFRKDYPHLPMNRARVLLVEALDTVLATYDER 226
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L+ YA QL + GV L G V V + L G +P ++W+ GV L L L
Sbjct: 227 LQQYARRQLRRRGVELHLGDPVARVTPDAVYLQSGERIPTRTVIWAAGVRACPLADRLGL 286
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P++ GGRI ++ LRVP +VF +GD + + G+ + P +A VA + +++ + R
Sbjct: 287 PQTRGGRIEVEADLRVPGHPNVFVIGDLAASRDENGR-LHPQMAPVAIQGARHVARQIRR 345
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ + + +PF YRH G+MATIGR+ A+ +L+ GL L G L+W
Sbjct: 346 LLQG-----------QETEPFHYRHRGTMATIGRHAAVAELK-----GGLRLTGPLAWFA 389
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTF 343
W + +L +++ +RNR V +NWA +
Sbjct: 390 WLALHLVQLIGFRNRLQVLINWAWNY 415
>gi|345304500|ref|YP_004826402.1| NADH dehydrogenase (ubiquinone) [Rhodothermus marinus
SG0.5JP17-172]
gi|345113733|gb|AEN74565.1| NADH dehydrogenase (ubiquinone) [Rhodothermus marinus
SG0.5JP17-172]
Length = 436
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 176/326 (53%), Gaps = 22/326 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I +D LV+A GA + FGI G E + L+ + A +R ++ +D E +
Sbjct: 97 RIDFDYLVLAAGATTNYFGIEGAAEYSFPLKTLEDAIALRSHIIRQFEEAD--RHPERIR 154
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
LL+ VVVGGGPTG+E +G L ++ R+ Y H+ + V L+EA + +L+S+D+R
Sbjct: 155 EGLLNIVVVGGGPTGIEMAGALVEWFELVFRKDYPHLPMNRARVLLVEALDTVLASYDER 214
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L+ YA QL + GV L G V V + L G +P ++W+ GV L L L
Sbjct: 215 LQQYARRQLRRRGVELHLGDPVARVTPDAVYLQSGERIPTRTVIWAAGVRACPLADRLGL 274
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P++ GGRI ++ LRVP +VF +GD + + G+ + P +A VA + +++ + R
Sbjct: 275 PQARGGRIEVEADLRVPGHPNVFVIGDLAASRDEQGR-LHPQMAPVAIQGARHVARQIRR 333
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ + + +PF YRH G MATIGR+ A+ +L+ GL L G L+W
Sbjct: 334 LLQG-----------QETEPFRYRHRGMMATIGRHAAVAELK-----GGLRLTGPLAWFA 377
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTF 343
W + +L +++ +RNR V +NWA +
Sbjct: 378 WLALHLVQLIGFRNRLQVLINWAWNY 403
>gi|70995614|ref|XP_752562.1| alternative NADH-dehydrogenase [Aspergillus fumigatus Af293]
gi|66850197|gb|EAL90524.1| alternative NADH-dehydrogenase [Aspergillus fumigatus Af293]
gi|159131317|gb|EDP56430.1| alternative NADH-dehydrogenase [Aspergillus fumigatus A1163]
Length = 603
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 205/399 (51%), Gaps = 80/399 (20%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISE 77
++ +D LV+ +GAE +TFGI GVKE++ FL+EV AQ+IR++++ M D P E
Sbjct: 216 EVPFDMLVVGVGAENATFGIKGVKEHSCFLKEVGDAQKIRKRIMDCVETAMFKDQP---E 272
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F
Sbjct: 273 EEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPEIKDNFHVTLVEALPNVLPMFS 332
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVG 187
+L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 333 KQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGNA 392
Query: 188 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+V+ L +P R G ++E+L V ++V+AVGDC+ T AQV
Sbjct: 393 VRNVVRDLMNQIPAQKNSRRGLAVNEYLVVNGTENVWAVGDCAV-------TNYAPTAQV 445
Query: 244 AERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD-------------- 276
A ++G +L L N R+ +A N + ++ D
Sbjct: 446 ASQEGAFLARLFNTMAKTEAIEKELKRLSEAQAVAKNEEERNKIFDEIRERQKQLRRTKQ 505
Query: 277 --PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS------ 328
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S
Sbjct: 506 IGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTVTYLFWRSAYLSMCFSSKCLLR 563
Query: 329 ----------------WRNRFYVAVNWATTFVFGRDISR 351
RNR VA +W +FGRD+SR
Sbjct: 564 PTNHKIVPFPFLTISIARNRVLVAADWLKAKIFGRDVSR 602
>gi|50309857|ref|XP_454942.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644077|emb|CAH00029.1| KLLA0E21891p [Kluyveromyces lactis]
gi|62868402|emb|CAD43037.2| putative NADPH dehydrogenase [Kluyveromyces lactis]
Length = 547
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 198/362 (54%), Gaps = 41/362 (11%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
++ ++YD LV+ +GA+ +TFGI GV ENA+FL+E+ AQ+IR K++ N+ + ++
Sbjct: 197 YELDLNYDYLVVGVGAQPTTFGIPGVFENASFLKEIPDAQDIRTKIMNNIEKAATLSAND 256
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E+ RLL VVVGGGPTGVEF+ EL D++ +D+ + + I VTL+EA IL+ FD
Sbjct: 257 PERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWIPEISKEIKVTLVEALPNILNMFD 316
Query: 137 DRLRHYATT--QLSKSGVRLVRGIVKDVDSQKLILN--DGTE-VPYGLLVWSTGVGP--- 188
L YA + K V+L + +VK+V+S + D TE +PYGLLVW+TG P
Sbjct: 317 KSLWQYAQDLFAMEKIDVKL-KTMVKNVNSTTITAQCGDATEDIPYGLLVWATGNAPREV 375
Query: 189 -STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL---AQVA 244
L+ L+ S G + D+ + + ++A+GDC T P L AQVA
Sbjct: 376 SKNLMAKLEQQNSRRGLLINDKMQLLGAEDSIWAIGDC---------TFFPGLFPTAQVA 426
Query: 245 ERQGKYLFSLLNR----------IGKAGGGRANSAKDMELG------DPFVYRHLGSMAT 288
++ +YL L + I K S +L PF Y H G++A
Sbjct: 427 HQEAEYLTETLKQQYKIDQLKWEISKTTNATETSKLHSKLDRIVKQQKPFKYNHQGTLAY 486
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG +A+ D+ ESK +AG ++L W+SAYL +S+RNR VA++WA + GRD
Sbjct: 487 IGSEQAIADVAVG-ESK-YQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFLGRD 544
Query: 349 IS 350
S
Sbjct: 545 SS 546
>gi|294656521|ref|XP_458790.2| DEHA2D07568p [Debaryomyces hansenii CBS767]
gi|199431532|emb|CAG86934.2| DEHA2D07568p [Debaryomyces hansenii CBS767]
Length = 568
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 198/378 (52%), Gaps = 41/378 (10%)
Query: 6 ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLL 65
++ E +E ++YD LV+ +GA+ STFGI GV E++TFL+EV + IR++L+
Sbjct: 199 KSTVSEYTGIEEITTSLNYDYLVVGVGAQPSTFGIPGVAEHSTFLKEVSDSMSIRKRLMD 258
Query: 66 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL 125
+ +++ +E++ RLL VV GGGPTGVE +GEL D+I +D+++ V + V L
Sbjct: 259 VIEAANILPKGDEDRKRLLSIVVCGGGPTGVEVAGELQDYIDQDLKKWMPEVASELKVIL 318
Query: 126 IEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-----DGT----E 174
+EA +L+ F+ +L Y + + L +VK+V + + + DG+ E
Sbjct: 319 VEALPNVLNMFNKKLVDYTKQVFQDTNIDLKTNTMVKNVSDKHVTCSVKDPKDGSTEIQE 378
Query: 175 VPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLE 230
+PYG+L+W+TG P + +L + + R G +DE L V +++A+GDC+
Sbjct: 379 IPYGMLIWATGNAPRAITHNLTSKIDEQRNARRGLLVDERLLVDGTDNIYALGDCTF--- 435
Query: 231 STGKTVLPALAQVAERQGKYL--------------FSLLNRIGKAGGGRANSAKDMELGD 276
T AQVA ++G +L F++ N R + L D
Sbjct: 436 ----TKYAPTAQVAFQEGTFLAKHFEKVHELEATKFTIQNPTATDNIDRLKKKFSI-LQD 490
Query: 277 P---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 333
F Y + G++A IG KA+ DL S ++ G L++L WRSAY+ +S +N+
Sbjct: 491 KLPVFEYVNQGALAYIGSEKAVADLVWGDWS-NVTTGGTLTFLFWRSAYVYMCLSVKNQV 549
Query: 334 YVAVNWATTFVFGRDISR 351
V ++WA +FGRD S+
Sbjct: 550 LVCLDWAKVSIFGRDCSK 567
>gi|302843218|ref|XP_002953151.1| hypothetical protein VOLCADRAFT_63330 [Volvox carteri f.
nagariensis]
gi|300261538|gb|EFJ45750.1| hypothetical protein VOLCADRAFT_63330 [Volvox carteri f.
nagariensis]
Length = 387
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 161/253 (63%), Gaps = 9/253 (3%)
Query: 9 TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 68
T L+ +PW+ +I YDK V+A+G + +TFG+ GVKE+ F++EV A +R+K+
Sbjct: 100 THLLQLSKPWQMQIQYDKAVVAVGEQPATFGVPGVKEHCFFMKEVTDAVALRKKIAEKFE 159
Query: 69 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128
L+ +PG SE+++ L+ VVVGGGPTGVEF+G LSDF+ D+R++Y + Y+ VTL+++
Sbjct: 160 LACLPGTSEQQRRAALNFVVVGGGPTGVEFAGTLSDFLREDLRKKYPALMPYVRVTLLQS 219
Query: 129 -NEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV 186
+ IL+ FD+RL+ A + L+ SGV + + V V+ K++L G E+ YG+ VWS G
Sbjct: 220 VSSILTQFDERLQRNALSNLTSSGVEVRTNVRVVGVNKDKVLLKGGEELDYGVCVWSAGN 279
Query: 187 GPSTLVKSLDLPK---SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
P LV + SPG ++ +D +LRV D+ A+GDCS L + LPA AQV
Sbjct: 280 APRPLVTQIASEASRLSPGSKLCVDSFLRVVGASDLLALGDCSLVLGNR----LPATAQV 335
Query: 244 AERQGKYLFSLLN 256
A +QG YL LLN
Sbjct: 336 AGQQGAYLAHLLN 348
>gi|396485177|ref|XP_003842106.1| similar to external NADH-ubiquinone oxidoreductase [Leptosphaeria
maculans JN3]
gi|312218682|emb|CBX98627.1| similar to external NADH-ubiquinone oxidoreductase [Leptosphaeria
maculans JN3]
Length = 576
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 198/377 (52%), Gaps = 52/377 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K ++ +D LV+ +GAE +TFGI GVKE+ FL+EV AQ IR +++ + SEE
Sbjct: 209 KNEVPFDMLVVGVGAENATFGIPGVKEHGLFLKEVGDAQRIRNRIMDCCETATFKDQSEE 268
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
EK RLLH VVVGGGPTGVEF+GEL DF D+++ +++ VTL+EA +L F
Sbjct: 269 EKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQNDFKVTLVEALPNVLPMFSK 328
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGP 188
+L Y + + + + +VK+V + + DG + +PYGLLVW+TG
Sbjct: 329 QLIDYTEKTFKEETITIRTKTMVKNVTEKYIEAESAGPDGKKQVERIPYGLLVWATGNAL 388
Query: 189 STLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V ++V+AVGDC+ + + T AQVA
Sbjct: 389 RPIVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----AQVA 441
Query: 245 ERQGKYLFSLLNRIGKAGGGRA---------NSAKDMELGD------------------- 276
++G +L + N++ K A D E D
Sbjct: 442 AQEGAFLARMFNQMAKTEAIETELKELSVAQEKAPDKEARDKVFAEIKSLQQRLRRVKQL 501
Query: 277 -PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RNR V
Sbjct: 502 GPFEYSHQGSLAYIGSDKAVADI--SWFAGNIASGGTITYIFWRSAYLSMCFSTRNRILV 559
Query: 336 AVNWATTFVFGRDISRI 352
++W FGRD+SR+
Sbjct: 560 LLDWMKAKAFGRDVSRV 576
>gi|397636505|gb|EJK72302.1| hypothetical protein THAOC_06178 [Thalassiosira oceanica]
Length = 385
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 193/377 (51%), Gaps = 50/377 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKE----NATFLREVHHAQEIRRKLLLNLMLSDVPG 74
KF + YD L IA G +++TF V E FL+ ++HA++IR +++ +
Sbjct: 16 KFDVRYDYLCIAGGMKSNTFNTPKVAELEGVVVFFLKHLYHARQIRNRIVECFERASNYT 75
Query: 75 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS 133
I ++ RLL +VVGGGPT EF EL DF+ +DV + Y + +I +TL+EA IL
Sbjct: 76 IPVVQRDRLLSFIVVGGGPTSCEFMSELHDFVTKDVVKWYPELAPHIKLTLVEAGPGILG 135
Query: 134 SFDDRLRHYATTQLSKS--GVRLVRGIV----KDVDSQKLI---LNDGTEVPYGLLVWST 184
SFD L Y +L + V+L + + VD +++ DGTE +G++VWS
Sbjct: 136 SFDKALSEYYLEKLREMDIDVKLSTAVSAIEERYVDGEQITVAKFGDGTEQNFGVMVWSA 195
Query: 185 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQV 243
G+ P ++ +L GR+ +D +LRVP+ + VFA+GDC+ ES LP A V
Sbjct: 196 GLSPVNFLEKSNLAME-RGRVAVDNYLRVPNSKGRVFALGDCATTSES-----LPPTATV 249
Query: 244 AERQGKYLFSLLNRIGKAGG--GRANSAKDMEL-GD-----------------------P 277
AE+ YL N + N KD+ L GD
Sbjct: 250 AEQSALYLADCFNNYHSKFDVLDKKNDNKDVPLPGDVTPYLMPWNALSFLNKLFCDSSPE 309
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGL--SLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
F Y++ GSMA++G + DL+++ + GL +++G S+LVW S YLT+ +S +N +
Sbjct: 310 FQYKNRGSMASMGFGGGVTDLKKS-DLPGLKSTMSGQASYLVWSSTYLTKQLSLQNMILI 368
Query: 336 AVNWATTFVFGRDISRI 352
+ W +FGRDISR
Sbjct: 369 PMYWFKALIFGRDISRF 385
>gi|320580764|gb|EFW94986.1| NADH dehydrogenase [Ogataea parapolymorpha DL-1]
Length = 537
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 197/360 (54%), Gaps = 38/360 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+A+GA+ STF I GV E+A FL+E+ A ++R++ L + + + EE+
Sbjct: 184 EVKYDYLVVAVGAQPSTFNIPGVAEHACFLKELPDAIQVRKRFLECVEKASLYPEGSEER 243
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL D++ D+ + + + +TLIEA +L+SF L
Sbjct: 244 KRLLHFVVVGGGPTGVEFAGELKDYVDEDLTKWMPSIAKEVQITLIEALPNVLNSFSKSL 303
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPST 190
YA +++ + L+ V V + + + DG+ E+PYG+LVW+ G+ P+
Sbjct: 304 WTYAQKTFAENNIELILNTAVNKVTATTITASTKKKDGSVEQKEIPYGMLVWAAGIRPAN 363
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
L + G R G +DE L+V ++V+A+GDC+ TG P QVA +
Sbjct: 364 FTNHLISKIEAQAGARRGLLVDENLKVKGTENVYAIGDCA----FTGH---PPTGQVAHQ 416
Query: 247 QGKYLFSLLNRIG-----KAGGGRANSAK---------DMELGD--PFVYRHLGSMATIG 290
+G YL S ++ ++ RA+++ D L PF Y HLGS++ +G
Sbjct: 417 EGHYLASTFAKMAAIDDLQSELARASNSDERAKVQARLDAALAQIKPFKYNHLGSLSYVG 476
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA+ DL S S G ++L+WRS+Y+ +S R R VA +W +FGRD++
Sbjct: 477 GEKAVADLVWGSFS-STSTGGAFTYLIWRSSYIAMCISARMRALVAADWLKVSLFGRDLT 535
>gi|330793729|ref|XP_003284935.1| hypothetical protein DICPUDRAFT_148767 [Dictyostelium purpureum]
gi|325085151|gb|EGC38564.1| hypothetical protein DICPUDRAFT_148767 [Dictyostelium purpureum]
Length = 581
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 200/374 (53%), Gaps = 49/374 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LV+ +GA+ TF I GV+ENA FL+E + + IR K++ L + P E+
Sbjct: 215 EFDLQYDHLVVGVGADNQTFNIPGVRENACFLKEFNDTRVIRDKIIDCLETASYPSQPEK 274
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLL+ VVVGGGP+GVEF+ EL+DF+ D+ + Y K I VTL+EA IL+ FD
Sbjct: 275 EIDRLLNFVVVGGGPSGVEFTAELNDFLQSDLLKNYPLAK-RIKVTLVEALPHILTVFDK 333
Query: 138 RLRHYATTQL-SKSGVRL-VRGIVKDVDSQKLIL----NDGTEVPYGLLVWSTGVGPSTL 191
++ + +L S R+ + V V + +I+ + T VPYGLLVW+TG P L
Sbjct: 334 KIIDHVEKRLRSSENTRIWTKTAVVGVKEKDIIVRNEKKEETNVPYGLLVWATGNAPRKL 393
Query: 192 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
L ++ + G + ID++ RV ++A+GD S L AQVA
Sbjct: 394 TTQLIQAIGTNVQNNRRGLV-IDDYFRVAGADGIWAIGDAS----INPSKPLAQTAQVAS 448
Query: 246 RQGKYLFSLLNRIGKAGGGRANSAKDMELG---------------------DPFV----- 279
+QG+YL L N + + +KD +L D F+
Sbjct: 449 QQGRYLGRLFNDLAEEMYNEKIKSKDQKLEQVTQEQQPTSTVFQTTTNKSFDSFIKSQPV 508
Query: 280 --YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
YRH+G++A +G ++A+ + + + + + G++++ +WRS Y T+++S RNR V
Sbjct: 509 FKYRHMGTLAYVGDHQAVAEFKGDHST--TTSEGYITYYLWRSVYFTKLLSIRNRTLVVF 566
Query: 338 NWATTFVFGRDISR 351
+WA + +FGRDISR
Sbjct: 567 DWAKSAIFGRDISR 580
>gi|443916493|gb|ELU37549.1| NADH dehydrogenase [Rhizoctonia solani AG-1 IA]
Length = 580
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 198/383 (51%), Gaps = 64/383 (16%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL-----------LNLMLS 70
I YD LV A+GAE TFGI GV+ENA F++E+H A+++R ++ + ++
Sbjct: 208 IPYDYLVYAVGAETQTFGIPGVRENACFMKELHDAEKLRTTIMDCKLSRHQKPGMKTLIF 267
Query: 71 DVPGI--------SEEEKSRLLHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDY 120
+ GI S+EE RLLHCVVVGGGPTGVE SGEL DF + D+ Y +
Sbjct: 268 PIQGIESAAFKDQSDEEIDRLLHCVVVGGGPTGVELSGELHDFLKVYEDLENWYPDIAPR 327
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----E 174
+ +TLIEA +L +F L Y + ++ + + + +VK++ + +++ + E
Sbjct: 328 LRITLIEALPNVLPTFSRELIKYTESTFKENKIDVMTKTMVKEIKEKSVLVQNAAGERVE 387
Query: 175 VPYGLLVWSTG-VGPSTLVKSLD-LPKSPGGRIGI--DEWLRVPSVQDVFAVGDCSGYLE 230
+P+G +VW+ G VG K ++ P+ + GI D++LR+ +FAVGDC+
Sbjct: 388 IPFGAIVWAAGNVGRPITRKLMEHFPEHQTNKRGITVDDFLRMKGADGIFAVGDCTA--- 444
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGK------------AGGGRANSAKDMELG--- 275
T AQVA ++G YL L +I K AG + + +E
Sbjct: 445 ----TSYAPTAQVASQEGTYLARLFGQIAKKDKLEKRLAELRAGPHTDETERQIESVVKQ 500
Query: 276 -------DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 328
PF Y H GS+A IG KA+ DL + G G ++L WRSAYL+ + S
Sbjct: 501 INKASKLRPFHYSHQGSLAYIGSEKAIADLPFLNGNVG----GVATYLFWRSAYLSNLFS 556
Query: 329 WRNRFYVAVNWATTFVFGRDISR 351
RNRF V +W +FGRD+SR
Sbjct: 557 LRNRFLVINDWLKVKIFGRDVSR 579
>gi|410076710|ref|XP_003955937.1| hypothetical protein KAFR_0B05060 [Kazachstania africana CBS 2517]
gi|372462520|emb|CCF56802.1| hypothetical protein KAFR_0B05060 [Kazachstania africana CBS 2517]
Length = 529
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 204/347 (58%), Gaps = 30/347 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+ +G++ +TF I GV EN++FL+E+ A+EI+ K+ N+ L+ + +
Sbjct: 194 IDYDYLVVGVGSKPTTFNIPGVIENSSFLKEISDAKEIKSKIFKNIELASALENGDPLRK 253
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLR 140
+LL VVVGGGPTGVEF+ ELSD+I +D+ + +++ I +TL+E A IL SF+ L
Sbjct: 254 KLLSFVVVGGGPTGVEFAAELSDYIQQDINKWQPELQNDISITLVEAAPNILPSFNKELI 313
Query: 141 HYATTQLSKSG-VRL-VRGIVKDVDS---QKLILNDGTE----VPYGLLVWSTGVGPSTL 191
YA LS G ++L + IVK+VDS + LI ++ +PYG+LVW+TG P +
Sbjct: 314 QYAEELLSSKGKIQLKLNTIVKEVDSNYLKGLIKEQNSDHMEHIPYGVLVWATGNAPRDI 373
Query: 192 VKSL-DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL---AQVA 244
+SL K R G I++ L++ +D +FA+GDC T P L AQVA
Sbjct: 374 CQSLMSKLKQQDSRRGLLINDKLQLLGAEDSIFAIGDC---------TFHPGLFPTAQVA 424
Query: 245 ERQGKYLFSLLNRIGKAGG-GRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303
++GKYL ++ R+ K + +E+ D F Y++ G++A IG+ KA+ D+
Sbjct: 425 SQEGKYLANIFKRLHKIERLAFEKKIRKIEIPD-FKYKYKGALAYIGQDKAIADVVT--F 481
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
K AG L++ W+SAYLT + S+RN+ VA++W +FGR+ S
Sbjct: 482 GKTYPSAGSLTFYFWKSAYLTMLSSFRNKILVALDWTKVSMFGRNSS 528
>gi|336366067|gb|EGN94415.1| NDE2, mitochondrial external NADH dehydrogenase [Serpula lacrymans
var. lacrymans S7.3]
gi|336378739|gb|EGO19896.1| mitochondrial external NADH dehydrogenase, NDE1 [Serpula lacrymans
var. lacrymans S7.9]
Length = 561
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 190/363 (52%), Gaps = 44/363 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TFGI GVK++A F++E+H A+ ++R+ + + + PG S++E
Sbjct: 209 IPYDYLVYAVGAETQTFGIPGVKKHACFMKELHDAERMQRQFMDCVESAAFPGQSDQEID 268
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF+ D++ Y + I +TL+EA +L F +L
Sbjct: 269 RLLHMVVVGGGPTGVELSGELHDFLEDDLKSWYPELASRIRITLVEALPSVLPMFSKKLI 328
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPSTLVKSL 195
Y + +S + L + +VK+V + ++L EVP G++VW+ G + + L
Sbjct: 329 DYTESTFKESKIDILTKTMVKEVKDKSVVLQMPDKSIAEVPCGMVVWAAGNTGRQVTRDL 388
Query: 196 --DLPKSPGGRIGI---DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
LP+ + GI D + S +FAVGDC T + P AQVA +QG Y
Sbjct: 389 MAKLPEEQTNKRGITVDDHLMMKGSNGSIFAVGDC------TASSYAPT-AQVASQQGAY 441
Query: 251 LFSLLNRIGKAGG---------GRANSAKDMELG-----------DPFVYRHLGSMATIG 290
L + + K G K E PF Y H GS+A IG
Sbjct: 442 LARIFALVAKKDNLEAQLVKLEGTTEPEKQAEADRIRKQIDKIKLKPFHYSHQGSLAYIG 501
Query: 291 RYKALVDLR--QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
KA+ DL ++ + G G ++L WRSAYL+ + S RNR VA +W +FGRD
Sbjct: 502 SEKAVADLPIFGHEWASG----GVATYLFWRSAYLSTLFSLRNRTLVASDWLRVKLFGRD 557
Query: 349 ISR 351
+SR
Sbjct: 558 VSR 560
>gi|449444399|ref|XP_004139962.1| PREDICTED: NAD(P)H dehydrogenase B2, mitochondrial-like [Cucumis
sativus]
gi|449475728|ref|XP_004154535.1| PREDICTED: NAD(P)H dehydrogenase B2, mitochondrial-like [Cucumis
sativus]
Length = 585
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 135/219 (61%), Gaps = 13/219 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD L+IA+GA+++TF GV+ENA FL+ V AQ IR+ ++ + +P +SEE
Sbjct: 161 EFSVDYDYLIIAMGAKSNTFNTPGVEENAHFLKGVEDAQRIRQTVIDCFERASLPNLSEE 220
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
EK R LH V+VGGGPTGVEF+ EL DF + D+ Y +KDY+ +TL+EA + IL+ FD
Sbjct: 221 EKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLAALYPSLKDYVKITLLEAGDHILNMFDK 280
Query: 138 RLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
R+ +A + + G+ L G + K++ +++ + +PYG++VWSTG+GP
Sbjct: 281 RITAFAEEKFQRDGIELKTGSMVVKVTDKEISTKESATGEFVSIPYGMVVWSTGIGPRPQ 340
Query: 192 VKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
V +D G + DEWLRV V+A+GDC+
Sbjct: 341 V--IDFMNQIGQTNRRALATDEWLRVEGCDGVYALGDCA 377
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL S +R+ + + G PF Y+H G A +G
Sbjct: 471 LPATAQVAAQQGEYLASCFSRMDQCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGE 530
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y +++VSWR R V +W FVFGRD SRI
Sbjct: 531 QTAAQLPGDWISIGHST----QWL-WYSVYTSKLVSWRTRILVISDWGRRFVFGRDSSRI 585
>gi|238883022|gb|EEQ46660.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 622
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 199/376 (52%), Gaps = 41/376 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+H E + + T +++YD LV+ +GA+ STFGI GV E++TF++EV + +I++
Sbjct: 261 KIHQEHKMEHITT------ELNYDYLVVGIGAQPSTFGIPGVAEHSTFVKEVRDSIKIKK 314
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
K++ + +++ + + ++ RLLH VV GGGPTGVE +GE+ D+I +D+++ + +
Sbjct: 315 KIIDLIEAANLLPVGDPDRKRLLHIVVCGGGPTGVEAAGEIQDYIDQDLKKWMPQIAKDM 374
Query: 122 HVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG----TE 174
V+L+E+ +L +F L Y + + LV IVK D+ ++ +
Sbjct: 375 KVSLVESQPVVLHTFSSELVEYTNHIFKDTNINLVTNSRIVKVDDTHVDVMRKSDKSIDK 434
Query: 175 VPYGLLVWSTGVGPSTLVKSL-----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 229
VPYG+L+W+TG K + + SP G + +D+ L++ +++A+GDC+
Sbjct: 435 VPYGMLIWATGNSVRGFTKIIMDKFSEQQTSPRGLL-VDDQLKLKGSDNIYALGDCTF-- 491
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD------------- 276
T AQVA +QG YL ++ K R +D + +
Sbjct: 492 -----TKYAPTAQVAFQQGIYLAHYFEKLQKVEKLRYKIKQDPSISEVYVHRLQRLENSL 546
Query: 277 -PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
FVY + GS+A IG KA+ DL S LS G L++L WRSAY+ +S +N+ V
Sbjct: 547 PKFVYNYRGSLAYIGSEKAVADLAVGSWS-NLSSGGNLTFLFWRSAYIMMCLSIKNQLLV 605
Query: 336 AVNWATTFVFGRDISR 351
+W ++FGRD SR
Sbjct: 606 CFDWIKVYLFGRDCSR 621
>gi|402771252|ref|YP_006590789.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Methylocystis sp. SC2]
gi|401773272|emb|CCJ06138.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Methylocystis sp. SC2]
Length = 419
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 184/354 (51%), Gaps = 21/354 (5%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+ + E+V + ++ K +I YD LV+A GA S FG H A L+ + A IR
Sbjct: 82 LMLTVESVDAARKIVKTDKCEIGYDFLVVATGATHSYFG-HNWASLAPGLKSISDATLIR 140
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
RKLLL ++V + E+ RLL ++VGGGPTGVE +G +S+ R + +
Sbjct: 141 RKLLLAFERAEV-SVDPIERERLLTIIIVGGGPTGVELAGAISELARRTLPPEFRRADPR 199
Query: 121 -IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYG 178
+ L+EA IL+SF +RL HYA L SGV + + D + I+ E+P G
Sbjct: 200 KARIILLEAGPRILASFPERLSHYARNALESSGVDVRTNLPVDQVFEDRIVAGENEIPAG 259
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+++W+ GV S L + GRI + E L VP++ DV+ +GD + + G V P
Sbjct: 260 VILWAAGVRASPAAHWLGVEGDGAGRIPVSEDLTVPTLPDVYVIGDLALLIGPDGAPV-P 318
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
ALA A++ GKY G+A R + PF YR G++ATIGR A+V L
Sbjct: 319 ALAASAKQMGKY-------AGRAIRLRLQGRFPRK---PFRYRDYGNLATIGRNSAIVKL 368
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L L GF WL W ++ +V+ R+RF+VA++W T++ G SR+
Sbjct: 369 GR------LELTGFPGWLFWSIVHIYFLVNLRSRFFVAISWIATYLTGNRGSRL 416
>gi|70996132|ref|XP_752821.1| pyridine nucleotide-disulphide oxidoreductase [Aspergillus
fumigatus Af293]
gi|66850456|gb|EAL90783.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus fumigatus Af293]
gi|159131574|gb|EDP56687.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus fumigatus A1163]
Length = 545
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 190/389 (48%), Gaps = 73/389 (18%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLV+A+G TF GV+ENA F +++ A+ +RR++ L+ +P + E
Sbjct: 172 FTVPYDKLVVAVGTVTKTFNTPGVRENALFFKDIGDARRVRRRVRECFELAVLPTTAPEM 231
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LLH +VG GPTG E + L DFI RD+ Q Y + +TL + A +LS FD+R
Sbjct: 232 RQWLLHFAIVGAGPTGTELAASLRDFISRDLMQLYPSLAGIPRITLYDVAPTVLSMFDER 291
Query: 139 LRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGTEVPYGLLV 181
L YA + K G+ + V G+ ++D ++ L + EV G+ V
Sbjct: 292 LAAYAMETMKKEGITIKTSHHVAGLRWGEPGASPPYEMDPKRCLTLTTKEEGEVGVGMCV 351
Query: 182 WSTGVGPSTLVK--------------------------SLDLPKSPGGRIGIDEWLRV-- 213
W TG + V+ S + K P G + +D LRV
Sbjct: 352 WVTGNQMNEFVRNSLEEVDVFPSASATAKGDKIKDENTSWKVKKGPNGALLVDGRLRVQL 411
Query: 214 -------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRA 266
++DVFA+GD + + TG PA AQ ++ K+L + LN
Sbjct: 412 ANDHGETAILRDVFALGDNA--MPETGAP--PATAQATFQEAKWLAAWLN---------- 457
Query: 267 NSAKDMELGDPFVYRHLGSMATIGRYKALVDL--RQNKESKGLS--LAGFLSWLVWRSAY 322
A D+E PF +R++G++A IG +AL+ L + K L L G ++WLVW SAY
Sbjct: 458 --ADDIEQAPPFSFRNMGTLAYIGDARALMQLPHEDGRRYKYLPHGLTGRMAWLVWNSAY 515
Query: 323 LTRVVSWRNRFYVAVNWATTFVFGRDISR 351
LT +SWRNR VA W +FGRD+SR
Sbjct: 516 LTMSISWRNRLRVAFRWLLNNLFGRDVSR 544
>gi|401626422|gb|EJS44369.1| nde2p [Saccharomyces arboricola H-6]
Length = 545
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 211/375 (56%), Gaps = 38/375 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV ++V+++ E + ++YD LV+++GA+ +TF I GV NA FL+E+ AQ IR
Sbjct: 182 KVMVQSVSED----EYFVSSLNYDYLVVSVGAKTTTFNIPGVYGNALFLKEIEDAQNIRM 237
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KL+ + + +++ E+ RLL VVVGGGPTGVEF+ EL D++ +D+R+ + +
Sbjct: 238 KLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYVNQDLRKWMPDLSQEM 297
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDGT---EV 175
+V LIEA IL+ FD L YA ++ + L V VK V+S ++ L +G ++
Sbjct: 298 NVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKAVESTRIRTLQNGQKTDDI 357
Query: 176 PYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCSGYLES 231
PYG+LVW+TG P L K+L +P+ R + I++ L + ++ ++A+GDC+ +
Sbjct: 358 PYGMLVWATGNEPIELSKTLMGRIPEQTNKRGLLINDKLELLGAENSIYAIGDCTAH--- 414
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNR---IGKAGGGRANSAKDMELG------------- 275
TG P AQVA ++G+YL +L++ I + N+A D +
Sbjct: 415 TG--FFPT-AQVAHQEGEYLAKILDKKLQINQLEWDMLNTADDTKASHLQKEINSMKSKL 471
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
D F Y+H+G++A IG A+ DL S L G ++L W+SAYL +S RN+ +
Sbjct: 472 DKFNYKHMGALAYIGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNKILI 529
Query: 336 AVNWATTFVFGRDIS 350
A++W + GRD S
Sbjct: 530 AMDWTKVYFLGRDSS 544
>gi|116207468|ref|XP_001229543.1| hypothetical protein CHGG_03027 [Chaetomium globosum CBS 148.51]
gi|88183624|gb|EAQ91092.1| hypothetical protein CHGG_03027 [Chaetomium globosum CBS 148.51]
Length = 580
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 201/374 (53%), Gaps = 54/374 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LVI +GAE +TFGI GV++++ FL+E+ AQ IR++++ + + S EE
Sbjct: 217 EVPYDMLVIGVGAENATFGIPGVRDHSCFLKEIGDAQRIRKRIMDCVETAAFKDQSPEEI 276
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
+RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L F +L
Sbjct: 277 NRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEIADRFRVTLIEALPNVLPMFSKQL 336
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK V + ++ DG + PYGLLVW+TG
Sbjct: 337 IDYTESTFKEEKIDIHTKTMVKKVTDKTVEAEVTRPDGKKETIVFPYGLLVWATGNAVRP 396
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
++K L +P R G ++E+L V +D++AVGDC +GY + AQVA
Sbjct: 397 VIKDLISRIPAQANSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---------AQVA 447
Query: 245 ERQGKYLFSLLNRI-------GKAG----------GGRANSAKDMEL----------GDP 277
++G +L L N + GK G A ++++E P
Sbjct: 448 GQEGTFLARLFNNMAMTEALEGKISELSSSLNLQPGNAAAVSREIESYERQLRRIKDAKP 507
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + ++ AG L++L WRSAY++ S RNR V
Sbjct: 508 FHYSHQGSLAYIGSDKAVADV--TWFNGNVAAAGSLTYLFWRSAYISMCFSTRNRLLVIN 565
Query: 338 NWATTFVFGRDISR 351
+W + VFGRD+SR
Sbjct: 566 DWLKSKVFGRDLSR 579
>gi|68475691|ref|XP_718052.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|68475826|ref|XP_717986.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|46439728|gb|EAK99042.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|46439803|gb|EAK99116.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
Length = 622
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 199/376 (52%), Gaps = 41/376 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+H E + + T +++YD LV+ +GA+ STFGI GV E++TF++EV + +I++
Sbjct: 261 KIHQEHKMEHITT------ELNYDYLVVGIGAQPSTFGIPGVAEHSTFVKEVRDSIKIKK 314
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
K++ + +++ + + ++ RLLH VV GGGPTGVE +GE+ D+I +D+++ + +
Sbjct: 315 KIIDLIEAANLLPVGDPDRKRLLHIVVCGGGPTGVEAAGEIQDYIDQDLKKWMPQIAKDM 374
Query: 122 HVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG----TE 174
V+L+E+ +L +F L Y + + LV IVK D+ ++ +
Sbjct: 375 KVSLVESQPVVLHTFSSELVEYTNHIFQDTNINLVTNSRIVKVDDTHVDVMRKSDKSIDK 434
Query: 175 VPYGLLVWSTGVGPSTLVKSL-----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 229
VPYG+L+W+TG K + + SP G + +D+ L++ +++A+GDC+
Sbjct: 435 VPYGMLIWATGNSVRGFTKIIMDKFSEQQTSPRGLL-VDDQLKLKGSDNIYALGDCTF-- 491
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD------------- 276
T AQVA +QG YL ++ K R +D + +
Sbjct: 492 -----TKYAPTAQVAFQQGIYLAHYFEKLQKVEKLRYKIKQDPSISEVYVHRLQRLENSL 546
Query: 277 -PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
FVY + GS+A IG KA+ DL S LS G L++L WRSAY+ +S +N+ V
Sbjct: 547 PKFVYNYRGSLAYIGSEKAVADLAVGSWS-NLSSGGNLTFLFWRSAYIMMCLSIKNQVLV 605
Query: 336 AVNWATTFVFGRDISR 351
+W ++FGRD SR
Sbjct: 606 CFDWIKVYLFGRDCSR 621
>gi|241956708|ref|XP_002421074.1| external NADH-ubiquinone oxidoreductase, mitochondrial precursor,
putative; mitochondrial external NADH dehydrogenase,
putative [Candida dubliniensis CD36]
gi|223644417|emb|CAX41231.1| external NADH-ubiquinone oxidoreductase, mitochondrial precursor,
putative [Candida dubliniensis CD36]
Length = 529
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 198/375 (52%), Gaps = 39/375 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+H E + + T +++YD LV+ +GA+ STFGI GV E++TF++EV + +I++
Sbjct: 168 KIHQEHKMEHITT------QLNYDYLVVGVGAQPSTFGIPGVAEHSTFVKEVRDSIKIKK 221
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
K++ + +++ I + ++ RLLH VV GGGPTGVE +GE+ D+I +D+++ + + +
Sbjct: 222 KIIDLIEAANLLPIGDSDRKRLLHIVVCGGGPTGVEAAGEIQDYIDQDLKKWMPQIANDM 281
Query: 122 HVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG----TE 174
V+L+E+ +L +F L Y T + + LV IV D+ ++ +
Sbjct: 282 KVSLVESQPVVLHTFSSELVEYTNTIFKDTNINLVTNSRIVNVDDTHVDVMRKSDKSIDK 341
Query: 175 VPYGLLVWSTGVG----PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 230
VPYG+L+W+TG ++ ++ + +D+ L++ ++FA+GDC+
Sbjct: 342 VPYGMLIWATGNSVRGFTKIIMDKFSEQQTSSRGLLVDDQLKLKGSNNIFALGDCTF--- 398
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------------- 276
T AQVA +QG YL ++ + R +D + +
Sbjct: 399 ----TNYAPTAQVAFQQGIYLAQYFEKLQEVEKLRYKIKQDPSISEVYVHRLQRLENSLP 454
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
FVY + GS+A IG KA+ DL S LS G L++L WRSAY+ +S +N+ V
Sbjct: 455 TFVYNYRGSLAYIGSEKAVADLAVGSWS-NLSSGGNLTFLFWRSAYIMMCLSIKNQVLVC 513
Query: 337 VNWATTFVFGRDISR 351
+W ++FGRD SR
Sbjct: 514 FDWIKVYLFGRDCSR 528
>gi|115463241|ref|NP_001055220.1| Os05g0331200 [Oryza sativa Japonica Group]
gi|55167957|gb|AAV43826.1| putative NADPH dehydrogenase [Oryza sativa Japonica Group]
gi|55168034|gb|AAV43902.1| putative NADPH dehydrogenase [Oryza sativa Japonica Group]
gi|113578771|dbj|BAF17134.1| Os05g0331200 [Oryza sativa Japonica Group]
gi|125551853|gb|EAY97562.1| hypothetical protein OsI_19490 [Oryza sativa Indica Group]
gi|215704782|dbj|BAG94810.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631147|gb|EEE63279.1| hypothetical protein OsJ_18089 [Oryza sativa Japonica Group]
Length = 575
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 149/255 (58%), Gaps = 17/255 (6%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+HC + +D +F + YD LV+++GA +TF GV EN FL+EV AQ+IR+
Sbjct: 140 KIHCRSDSDGNS-----EFVVDYDYLVVSVGARPNTFNTPGVVENCHFLKEVEDAQKIRK 194
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+L + +P ++EEE+ + LH VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y
Sbjct: 195 SVLKCFERASLPNLTEEERKKNLHFVVIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKYA 254
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EV 175
++++IEA + IL+ FD R+ +A + ++G+ L +VK D + N T V
Sbjct: 255 NISVIEAGDHILTMFDKRITQFAEDKFKRTGIDLKTNFKVVKVSDKAITMTNSATGEIAV 314
Query: 176 PYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLES 231
PYG+ VWSTG+G L+ +D K G + DEWLRV DV+A+GDC+ +
Sbjct: 315 PYGMAVWSTGIGTRPLI--MDFMKQVGQANRRVLATDEWLRVHGCDDVYALGDCATITQR 372
Query: 232 TGKTVLPALAQVAER 246
+ ++ +VA++
Sbjct: 373 KVMEDIASIFRVADK 387
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGR 291
+LPA AQVA ++G YL + N++ + G PF YRHLG A +G
Sbjct: 460 MLPATAQVASQEGAYLANCFNKMKYCEENPEGPLRIRGTGRHRFKPFRYRHLGQFAPLGG 519
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ L + G S WL W S Y ++ SWR R V +W F++GRD S
Sbjct: 520 EQTAAQLPGDWIHVGHST----QWL-WYSVYASKQFSWRTRMLVVSDWGRRFIYGRDSSS 574
Query: 352 I 352
+
Sbjct: 575 L 575
>gi|409077243|gb|EKM77610.1| NDE1, mitochondrial external NADH dehydrogenase [Agaricus bisporus
var. burnettii JB137-S8]
Length = 581
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 194/369 (52%), Gaps = 48/369 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A+GAE TF I GVKE+A F++E++ A+ + + + L + PG +E
Sbjct: 212 IPYDYLVYAVGAETQTFNIPGVKEHACFMKELNDAERFQNEFIDCLETAGFPGQDPQEIE 271
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF+ D++ Y + + +TL+EA +L +F +L
Sbjct: 272 RLLHMVVVGGGPTGVELSGELHDFLEDDLKSWYPELAGKVRITLVEALPSVLPTFSKQLI 331
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPSTLVKSL 195
Y + +S + L + +VK++ + +IL EVP GL+VW+ G + + L
Sbjct: 332 DYTQSTFKESKIEVLTKTMVKEIKERSVILQMPDKSIQEVPCGLVVWAGGNKGRKVTQDL 391
Query: 196 --DLPKSPGGRIGI--DEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
P+ R GI D++LR+ +D +FA+GDC+ T AQVA +QG Y
Sbjct: 392 MAKFPEVQTNRRGIVVDDFLRMTGAEDSIFAIGDCTS-------TAYAPTAQVASQQGSY 444
Query: 251 LFSLLNRIGK-------------------AGGGRANSAKDMELGD---------PFVYRH 282
L L+++ K + + +D+E+ PF Y H
Sbjct: 445 LARHLHQMAKHDELQTKLSRLEALAATVVGEEEKKATLRDVEMTKKQLAKIKYRPFDYSH 504
Query: 283 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 342
GS+A IG KA+ DL + ++ G +++ WRSAYL+ + S RNR VA +W
Sbjct: 505 QGSLAYIGSEKAVADL--PFMNGNVATGGVATYMFWRSAYLSTLFSLRNRTLVATDWIKV 562
Query: 343 FVFGRDISR 351
+FGRD++R
Sbjct: 563 KLFGRDVAR 571
>gi|410080886|ref|XP_003958023.1| hypothetical protein KAFR_0F02920 [Kazachstania africana CBS 2517]
gi|372464610|emb|CCF58888.1| hypothetical protein KAFR_0F02920 [Kazachstania africana CBS 2517]
Length = 543
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 200/359 (55%), Gaps = 41/359 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
ISYD LV+ +GA+++TF I GV ENA F++E+ A+ IR K + N+ + + + E+
Sbjct: 195 ISYDYLVLGIGAQSTTFNIPGVYENAFFMKEISDAERIRSKFVENIEKASLLERGDPERR 254
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VVVGGGPTGVEF+ EL D+I +D+++ + V+LIEA IL+ FD RL
Sbjct: 255 RLLSFVVVGGGPTGVEFAAELRDYIDQDLKKWVPEISSEAQVSLIEALPNILNMFDKRLV 314
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLILN---DGTEVPYGLLVWSTGVGPSTL-VKSL 195
Y ++K+ + L + +VK+V+ + N + E+P+GLLVW+TG P L VK +
Sbjct: 315 DYTEQTVTKANIDLRLNHMVKEVNKDSISANVKGEKVEIPFGLLVWATGNAPMDLSVKLM 374
Query: 196 DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
+ + + G I+E L++ +D +FA+GDC+ + K + P AQVA ++G+YL
Sbjct: 375 NSLAAQTEKRGLLINEKLQLLGAEDSIFALGDCTFH-----KGLFPT-AQVAHQEGEYLA 428
Query: 253 SLLNRIGKAGGGR--ANSAKDMELGDP-------------------FVYRHLGSMATIGR 291
+ + K + N A +G+P F YRH+G++A IG
Sbjct: 429 RMFKELSKIDQLKWELNEA----VGNPKVIKKLNFKITRLNAQIKDFHYRHMGTLAYIGA 484
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA+VD++ + L + F W WRSAYL+ +S R R V ++W F GRD S
Sbjct: 485 DKAVVDVQLRNKRYSLQGSPFAFWF-WRSAYLSMCISIRTRILVTLDWIKIFFLGRDSS 542
>gi|356524746|ref|XP_003530989.1| PREDICTED: external NADH-ubiquinone oxidoreductase 2,
mitochondrial-like [Glycine max]
Length = 580
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 143/236 (60%), Gaps = 13/236 (5%)
Query: 2 KVHCET-VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KV+C + +++ L E +F + YD L+IA+GA +TF GV EN FL+EV AQ+IR
Sbjct: 139 KVYCRSNISNNLNEKE--EFVVDYDYLIIAVGANVNTFNTPGVMENCHFLKEVEDAQKIR 196
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P +SEEEK R+LH +VGGGPTGVEF+ L D++ D+ Y +KD
Sbjct: 197 RTVIDCFERASLPSVSEEEKKRILHFAIVGGGPTGVEFAASLHDYVTEDLVNIYPGIKDL 256
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLI----LNDG--- 172
+ +TL+EA + ILS FD R+ +A + + G+ + G + SQK I + +G
Sbjct: 257 VKITLLEAGDHILSMFDKRITAFAEEKFGRDGIDVKTGSMVVKVSQKEISTKEMKNGGAI 316
Query: 173 TEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
T +PYG+ VWSTG+G ++ + ++ I DEWLRV + +V+A+GDC+
Sbjct: 317 TTIPYGMAVWSTGIGTRPFIRDFMSQIGQTNRRAIATDEWLRVEATNNVYALGDCA 372
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 466 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGE 525
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S+I
Sbjct: 526 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 580
>gi|326503052|dbj|BAJ99151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 174/322 (54%), Gaps = 27/322 (8%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+HC++ D F + YD LV+ +GA +TF GV EN FL+EV AQ+IR+
Sbjct: 140 KIHCKS-GDGTNADANGDFVVDYDYLVVTVGARPNTFNTPGVVENCHFLKEVEDAQKIRK 198
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P +++EE+ + +H VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+
Sbjct: 199 SVMKCFERAALPNLTDEERKKNVHFVVIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKYV 258
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EV 175
++++IEA + IL+ FD R+ H+A + ++G+ L +VK D + N T V
Sbjct: 259 NISVIEAGDHILTMFDKRITHFAEDKFKRTGIDLKTNFKVVKVSDKTITMSNPATGEIAV 318
Query: 176 PYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLES 231
PYGL VWSTG+G ++ +D K G + DEWLRV +V+A+GDC+ +
Sbjct: 319 PYGLAVWSTGIGTRPMI--MDFMKQVGQANRRVLATDEWLRVQGCDNVYALGDCATITQR 376
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV-YRHLGSMATIG 290
+ A+ +VA++ +G K++ LGD + Y +
Sbjct: 377 KVMEDVDAIFRVADKD------------NSGTLTVKKIKNV-LGDIYQRYPQVELYLKTN 423
Query: 291 RYKALVDLRQNKESKGLSLAGF 312
+ K DL ++KES+ L++ F
Sbjct: 424 QMKGFNDLLKDKESEELNIEEF 445
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGR 291
+LPA AQVA ++G YL NR+ + G PF YRHLG A +G
Sbjct: 458 MLPATAQVAAQEGAYLADCFNRLNTCEENPEGPLRIRGAGRHRFKPFRYRHLGQFAPLGG 517
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ L + G S WL W S Y ++ SWR V +W F+FGRD S
Sbjct: 518 EQTAAQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTGMLVVTDWGRRFLFGRDSSS 572
Query: 352 I 352
+
Sbjct: 573 L 573
>gi|378725972|gb|EHY52431.1| NADH dehydrogenase [Exophiala dermatitidis NIH/UT8656]
Length = 582
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 191/404 (47%), Gaps = 86/404 (21%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F +SYDKL+IA+G + TF GV+ENA FL++V A IRR++L L+ +P + EE
Sbjct: 194 FPVSYDKLIIAVGTYSQTFNTKGVRENAYFLKDVGDAVAIRRRILELFELARLPIVPEEA 253
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K LLH +VGGGPTG+EF+ LSD I D+ + + + YI ++L + A ++L FD
Sbjct: 254 KRYLLHFAIVGGGPTGMEFAACLSDLIREDISRIHPELLKYIRISLYDVAPKVLPMFDAA 313
Query: 139 LRHYATTQLSKSGV---------RLVRGIVKDVDSQKLILNDGTEVP------------- 176
L YA Q + V L +G D ++ K N ++P
Sbjct: 314 LADYAVKQYRRQNVEIKTSHHVEELRKGFPNDPEAAK---NQDKQMPSRVYTIRTKEEGD 370
Query: 177 --YGLLVWSTGVGPSTLV-KSLD----LPK-----------------------SPGGRIG 206
G+ VWSTG+ + V K+L P S G I
Sbjct: 371 VGIGMCVWSTGLMANPFVAKALSHVQRFPSNSAHIYQGKVADPTQRQWTIQRDSRSGSIL 430
Query: 207 IDEWLRV----------PS-------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
+D+ RV P ++DVFAVGD + + TG LPA AQVA ++
Sbjct: 431 VDDHFRVNLAAQATDGEPEDFVPKAYMKDVFAVGDTTKLM--TG--ALPATAQVANQEAL 486
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD-LRQNKESKGLS 308
+L + LN + + F +R+LG +G A++ ++E
Sbjct: 487 WLGNALN--------KHPDPESFACTPGFTFRNLGVFTYVGGANAVLQGPNTDREGMAKG 538
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L G++++L+WR AYLT +SWRN+F V + W FGRDISR
Sbjct: 539 LKGWIAFLLWRGAYLTMTLSWRNKFLVPMQWLAVKWFGRDISRF 582
>gi|242054605|ref|XP_002456448.1| hypothetical protein SORBIDRAFT_03g036480 [Sorghum bicolor]
gi|241928423|gb|EES01568.1| hypothetical protein SORBIDRAFT_03g036480 [Sorghum bicolor]
Length = 578
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 141/236 (59%), Gaps = 8/236 (3%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD L++++GA +TF GV EN FL+EV AQ+IR+ ++ + +P +SEE
Sbjct: 156 EFVVDYDYLIVSVGARPNTFNTPGVTENCHFLKEVEDAQKIRKSVMKCFERAALPNLSEE 215
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E+ + LH VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+++++IEA IL+ FD
Sbjct: 216 ERKKNLHFVVIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKYVNISVIEAGGHILTMFDK 275
Query: 138 RLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLV 192
R+ +A + + G+ L +VK D+ + N T VPYG+ VWSTG+G ++
Sbjct: 276 RITQFAEEKFKRDGIDLKTNFKVVKVSDNDITMTNTATGEVTVPYGMAVWSTGIGTRPII 335
Query: 193 KSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
G R + DEWLRV +DV+A+GDC+ + + A+ +VA++
Sbjct: 336 MDFMKQVGQGNRRVLATDEWLRVQGCEDVYALGDCATIAQRKVMEDVAAIFRVADK 391
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGR 291
+LPA AQVA ++G+YL NR+ + G PF YRHLG A +G
Sbjct: 463 MLPATAQVALQEGRYLADCFNRMKTCEEYPEGPIRIRGTGRHRFKPFRYRHLGQFAPLGG 522
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 523 EQTAYQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTRMLVVSDWGKRFIFGRDSSS 577
Query: 352 I 352
I
Sbjct: 578 I 578
>gi|45188135|ref|NP_984358.1| ADR262Cp [Ashbya gossypii ATCC 10895]
gi|44982952|gb|AAS52182.1| ADR262Cp [Ashbya gossypii ATCC 10895]
gi|374107573|gb|AEY96481.1| FADR262Cp [Ashbya gossypii FDAG1]
Length = 533
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 200/358 (55%), Gaps = 34/358 (9%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
++ +++YD LV+ +GA+ +TFG GV E+A+FL+E+ AQ+IR K++ N+ + ++
Sbjct: 184 YEMELNYDCLVVGVGAQPTTFGTPGVYEHASFLKEIPDAQDIRVKVMNNIEKAAALSPND 243
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E+ RLL VVVGGGPTGVEF+ EL D++ +D+ + + I VTL EA IL+ FD
Sbjct: 244 PERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWMPELSKEIKVTLCEALPNILNMFD 303
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGP---- 188
L YA + + L V +VK+V + + G E+PYG+LVW+TG P
Sbjct: 304 KSLWQYAQDLFKQEKIDLKVNTMVKNVTATHITTKCGDQLEELPYGVLVWATGNAPRDVS 363
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+L+K LD SP G + I++ L++ +D ++A+GDC+ Y + P AQVA ++
Sbjct: 364 KSLMKKLDQQTSPRGLL-INDKLQLLGAEDSIYAMGDCTFY-----PGLFPT-AQVAHQE 416
Query: 248 GKYLFSLLNRIGKAGGGR---------------ANSAKDMELGDPFVYRHLGSMATIGRY 292
G+YL +L + K R A K PF Y H G++A IG
Sbjct: 417 GEYLAHVLKKQHKIDHLRWQLADAEPSQVPRITARLEKAEAAIQPFKYNHQGALAYIGSE 476
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA+ D+ ESK LAG ++L W+S+YL +S+RNR VA++W GRD S
Sbjct: 477 KAIADIAIG-ESK-YRLAGSWTFLFWKSSYLVMCLSFRNRILVALDWLKVSFLGRDSS 532
>gi|428165566|gb|EKX34558.1| hypothetical protein GUITHDRAFT_98053 [Guillardia theta CCMP2712]
Length = 546
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 195/385 (50%), Gaps = 57/385 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F +SYD LV+ LG + +TFG GVKE+ FL++++ A+ +R ++ + +P +++E
Sbjct: 164 EFDLSYDYLVLGLGMKINTFGTPGVKEHCFFLKDINDAKRLRSAIIDKFESASLPNLTDE 223
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDD 137
E+ LL VVVGGGPTGVEFSGE DF+ D+++ Y + ++ LI+A + +L+ FD+
Sbjct: 224 ERRELLSFVVVGGGPTGVEFSGEFFDFLNEDLKRYYPQLVPFVRTELIQAGDALLNQFDE 283
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--------DGTEVPYGLLVWSTGVGP 188
++ A L GV+ L+ V++V ++++ N Y L VW+ G P
Sbjct: 284 TMQAMALRSLLSQGVKVLLNARVEEVSAKEIRYNIRNPDKTTTTITTKYSLCVWAAGNSP 343
Query: 189 STLVKSLDLPKSP-----GGRIGIDEWLRVPSVQD--VFAVGDCSGYLESTGKTVLPALA 241
L K P GRI D+WLRV + D VFA+GDCS + VLP A
Sbjct: 344 IELSKEFQKKNQPWKQDKRGRIVTDDWLRVVGINDGSVFALGDCS----ESESVVLPQTA 399
Query: 242 QVAERQGKYLFSLLNR----------------IGKAGGGRANSAKDMELGD--------- 276
QVA +QG YL + NR A RA + EL
Sbjct: 400 QVAAQQGAYLARIFNRQFRGPDKGFLPEQTYGAALALSLRARARDGDELAKTIIDEHRVF 459
Query: 277 --PFVYRHLGSMATIGRYKALVDLRQNKESK---GLSL------AGFLSWLVWRSAYLTR 325
PF + LG +A +G A+ + +S G L +G W++WRS YLT+
Sbjct: 460 VRPFQFLSLGLLAYVGGRSAIAQVEVGMDSPHKTGTQLLRLSKQSGLAGWILWRSVYLTK 519
Query: 326 VVSWRNRFYVAVNWATTFVFGRDIS 350
V++RNR V +W + VFGRDI+
Sbjct: 520 QVAFRNRVLVLFDWMKSRVFGRDIA 544
>gi|356521297|ref|XP_003529293.1| PREDICTED: external NADH-ubiquinone oxidoreductase 2,
mitochondrial-like [Glycine max]
Length = 580
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 144/236 (61%), Gaps = 13/236 (5%)
Query: 2 KVHCET-VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KV+C + +++ L E +F + YD L+IA+GA +TF GV EN FL+EV AQ+IR
Sbjct: 139 KVYCRSNISNNLNEKE--EFVVDYDYLIIAVGANVNTFNTPGVMENCHFLKEVEDAQKIR 196
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P +SEEEK R+LH +VGGGPTGVEF+ L D++ D+ Y +KD
Sbjct: 197 RTVIDCFERASLPSVSEEEKKRILHFAIVGGGPTGVEFAASLHDYVTEDLVNIYPGIKDL 256
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVD---SQKLILNDG-- 172
+ +TL+EA + ILS FD R+ +A + + G+ + G +VK + S K + N G
Sbjct: 257 VKITLLEAGDHILSMFDKRITAFAEEKFGRDGIDVKTGSMVVKVSEKEISTKEMKNGGAI 316
Query: 173 TEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
T +PYG+ VWSTG+G ++ + ++ I DEWLRV + +V+A+GDC+
Sbjct: 317 TTIPYGMAVWSTGIGTRPFIRDFMSQIGQTNRRAIATDEWLRVEATNNVYALGDCA 372
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 466 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGE 525
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S+I
Sbjct: 526 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 580
>gi|407927792|gb|EKG20678.1| hypothetical protein MPH_02033 [Macrophomina phaseolina MS6]
Length = 585
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 196/376 (52%), Gaps = 56/376 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+E+ FL+EV AQ+IR++++ + EE
Sbjct: 220 EVPFDMLVVGVGAENATFGIPGVREHGLFLKEVGDAQKIRKRIMDCCETATFKDQDPEEI 279
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ ++D HVTL+EA +L F +L
Sbjct: 280 KRLLHMVVVGGGPTGVEFAGELQDFFNGDLKKWIPDIRDNFHVTLVEALPNVLPMFSKQL 339
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWSTGVGPS 189
Y + + + + +VK V + K I + T +PYGLLVW+TG
Sbjct: 340 IEYTEKTFKEETITIRTKTMVKKV-TDKYIEAESTGPDGKKQLERIPYGLLVWATGNAVR 398
Query: 190 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+VK L +P R G ++E+L V ++++AVGDC+ + + T AQVA
Sbjct: 399 PVVKDLMSQIPAQRDSRRGLAVNEYLVVKGTENIWAVGDCA--VANYAPT-----AQVAA 451
Query: 246 RQGKYLFSLLNRIGKAGGGRAN----------------------SAKDM--------ELG 275
++G +L L N + K + S KD+ ++G
Sbjct: 452 QEGAFLARLFNNMAKTQQIESELLKLSDVQEKAPTKESRDEAFASIKDLQKRLRRVKQMG 511
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
PF Y H GS+A IG KA+ D+ + + G L++ WRSAYL+ S RNR V
Sbjct: 512 -PFEYSHQGSLAYIGSEKAVADI--TWLTGNFATGGTLTYYFWRSAYLSMCFSTRNRVLV 568
Query: 336 AVNWATTFVFGRDISR 351
V+W VFGRD+SR
Sbjct: 569 LVDWVKAKVFGRDVSR 584
>gi|356546676|ref|XP_003541749.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 577
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 140/235 (59%), Gaps = 12/235 (5%)
Query: 2 KVHC-ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KV+C +V + L E +F + YD L++A+GA +TF GV EN FL+EV AQ+IR
Sbjct: 137 KVYCRSSVNNNLDGKE--EFVVDYDYLIVAVGANVNTFNTPGVTENCHFLKEVEDAQKIR 194
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ +++P +SE+EK R+LH +VGGGPTGVEF+ L DF+ D+ + Y +KD
Sbjct: 195 RTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDL 254
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGT 173
+ +TL+EA N IL FD R+ +A + + G+ + G + K++ +++L +
Sbjct: 255 VKITLLEAGNHILGMFDKRITAFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGEIK 314
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+PYG+ VWSTG+G +K R + DEWLRV +V+A+GDC+
Sbjct: 315 TIPYGMAVWSTGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCNNVYALGDCA 369
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 463 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGHHRFKPFRYKHLGQFAPLGGE 522
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 523 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI 577
>gi|389742766|gb|EIM83952.1| FAD/NAD-P-binding domain-containing protein [Stereum hirsutum
FP-91666 SS1]
Length = 559
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 197/362 (54%), Gaps = 43/362 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L+ +GAE TFGI GV+++A F++E+ + ++R+ L + + PG S+EE
Sbjct: 208 IPYDYLIYGVGAETQTFGIPGVQQHACFMKEIQDGERMKRRFLDCVESAGFPGQSDEEID 267
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE SGEL DF+ +D++ Y + I +TL+EA +L F RL
Sbjct: 268 RLLHFVVVGGGPTGVEVSGELHDFLEQDLKSWYPELSSRIRITLVEALPSVLPMFSKRLI 327
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGP----STL 191
Y + +S + L + +VK++ + ++L D T EVP G++VW+ G P + L
Sbjct: 328 DYTESTFKESKIDILTKTMVKEIKEKSVVLQMPDKTIQEVPVGMVVWAGGNKPRVVTNDL 387
Query: 192 VKSLD--LPKSPGGR--IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAER 246
+K ++ + +S R I ID+ LR+ VFA+GDC T + P AQVA +
Sbjct: 388 IKRINSVVAESQTNRRGIAIDDHLRMVGTDGTVFALGDC------TASSYAPT-AQVASQ 440
Query: 247 QGKYLFSLLNRIG---------------KAGGGRANSAKDMELGDPFVYRHLGSMATIGR 291
QG YL L +++ K G + E PF Y H GS+A IG
Sbjct: 441 QGAYLGRLFSQLAKRDALAAAAASAVDEKEVEGLKKQLERTEKLRPFHYSHQGSLAYIGN 500
Query: 292 YKALVDL--RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
KA+ DL K + G G ++L WRSAYL+ + S RNR VA +W +FGRD+
Sbjct: 501 EKAIADLVFFNQKWASG----GVATFLFWRSAYLSTLFSMRNRVLVASDWLKVKLFGRDL 556
Query: 350 SR 351
+R
Sbjct: 557 AR 558
>gi|296424234|ref|XP_002841654.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637900|emb|CAZ85845.1| unnamed protein product [Tuber melanosporum]
Length = 567
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 197/375 (52%), Gaps = 54/375 (14%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+E+A FL+E++ A +IR+ ++ + + ++EEK
Sbjct: 202 EVPFDYLVVGVGAENATFGIPGVREHACFLKEINDAHKIRKTVMDCIETAMFKNQTQEEK 261
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+ EL DF D+++ + D HVTL+EA +L F L
Sbjct: 262 ERLLHMVVVGGGPTGVEFAAELQDFFEDDLKKWIPDIADDFHVTLVEALPNVLPMFSKTL 321
Query: 140 RHYA--TTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPS 189
Y T + K VR + +VK+V + ++ DG + +PYG LVW+TG
Sbjct: 322 IEYTEKTFKDEKISVR-TKTMVKNVTDKHIEAEVTHPDGRKELQRIPYGCLVWATGNAVR 380
Query: 190 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+V+ L LP+ R G ++E+L V ++A+GDCS T AQVA
Sbjct: 381 QVVRDLMSQLPQQKNSRRGLAVNEYLVVDGTDGIWALGDCSA-------TKYAPTAQVAS 433
Query: 246 RQGKYLFSLLNRIGKAGG------------GRANSAKDMELGD----------------- 276
+QG +L L N + + + + +D E +
Sbjct: 434 QQGAFLARLFNSMARTQALESELDHLEELSAQTTAQEDRESLEREIQKKGKAIRRVKQLS 493
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF Y H GS+A IG +A+ D+ + L+ G L++L WRSAYL+ + RNR V
Sbjct: 494 PFEYSHQGSLAYIGMERAVADITWF--NGNLASGGSLTYLFWRSAYLSMCFATRNRVLVL 551
Query: 337 VNWATTFVFGRDISR 351
++W VFGRD+SR
Sbjct: 552 MDWIKVKVFGRDVSR 566
>gi|449438064|ref|XP_004136810.1| PREDICTED: NAD(P)H dehydrogenase B1, mitochondrial-like [Cucumis
sativus]
gi|449520740|ref|XP_004167391.1| PREDICTED: NAD(P)H dehydrogenase B1, mitochondrial-like [Cucumis
sativus]
Length = 574
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 143/234 (61%), Gaps = 10/234 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV C++ D + +F + YD LVIA+GA+ +TF GVKEN FL+EV AQ+IRR
Sbjct: 138 KVFCQSNVDN-NLVGNREFALEYDYLVIAMGAQVNTFNTPGVKENCHFLKEVEDAQKIRR 196
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ ++ +P +SEEE+ R LH V+VGGGPTGVEF+ EL DF D+ Y VKD +
Sbjct: 197 GVIDCFEMAVIPSLSEEERRRNLHFVIVGGGPTGVEFAAELHDFFEEDLVNLYPSVKDLV 256
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGV------RLVRGIVKDVDSQKLILNDGTE 174
+++I++ + IL++FD+R+ +A + + G+ R+V K+++ + +
Sbjct: 257 KISVIQSGDHILNAFDERISSFAEQKFLRDGIDVYTGCRVVSVSDKEIEMKVKSTGESCS 316
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+P+GL++WSTG+ +VK G R + DEWL+V Q+V+A+GDC+
Sbjct: 317 MPHGLIIWSTGIMTRPVVKDFMEQIGQGSRRILATDEWLQVKGAQNVYAIGDCA 370
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNR----IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL NR G R + PF Y+HLG A +G
Sbjct: 460 LPATAQVAAQQGAYLSRCFNRRDYCTENPEGPRRFKSSGRHQFLPFRYKHLGQFAPLGGE 519
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A +L + S G S WL W S Y ++ VSWR R+ V +W F+FGRD SRI
Sbjct: 520 QAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRYLVVSDWTRKFIFGRDSSRI 574
>gi|226290348|gb|EEH45832.1| external NADH-ubiquinone oxidoreductase [Paracoccidioides
brasiliensis Pb18]
Length = 603
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 202/391 (51%), Gaps = 70/391 (17%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LVI +GAE STFGI GV+E++ FL+EV AQEIR++++ + + +E+E
Sbjct: 222 EVPYDMLVIGVGAENSTFGIPGVREHSCFLKEVGDAQEIRKRIMDCVETAIFKDQTEKEV 281
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD+ +TL+EA +L +F +L
Sbjct: 282 KRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDHFKITLVEALPNVLPTFSKQL 341
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTE---------VPYGLLVWSTGVGPS 189
Y + + + L + VK V S K I + T+ +PYGLLVW+TG
Sbjct: 342 IDYTESTFKEEEITILTKTSVKKV-SDKYIEAEATKPDGSKEMETIPYGLLVWATGNSIR 400
Query: 190 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+V+ L +P+ R G ++E+L V ++++AVGDC+ T AQVA
Sbjct: 401 GVVRDLINQIPEQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTAQVAS 453
Query: 246 RQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD---------------- 276
++G +L L N ++ KA N ++ D
Sbjct: 454 QEGAFLARLFNSMAKTEAIDAQLKQLSKAQAEAQNEEARTKILDEIRGLQKVLRRIKQIG 513
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSW------- 329
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S
Sbjct: 514 PFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSSKYFPTSP 571
Query: 330 ---------RNRFYVAVNWATTFVFGRDISR 351
RNR VA +W +FGRD+SR
Sbjct: 572 SLPAFLRISRNRVLVAFDWFKAKLFGRDVSR 602
>gi|414880221|tpg|DAA57352.1| TPA: hypothetical protein ZEAMMB73_528090 [Zea mays]
Length = 578
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 142/238 (59%), Gaps = 12/238 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD L++++GA +TF GV EN FL+EV AQ+IR+ ++ + +P +SEE
Sbjct: 156 EFVVDYDYLIVSIGARPNTFNTPGVTENCHFLKEVEDAQKIRKSVMKCFERAALPNLSEE 215
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E+ + LH VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+++++IEA IL+ FD
Sbjct: 216 ERKKNLHFVVIGGGPTGVEFAAELHDFVNADLAKLYPDVKKYVNISVIEAGGHILTMFDK 275
Query: 138 RLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLV 192
R+ +A + + G+ L +VK D + N T VPYG+ VWSTG+G ++
Sbjct: 276 RITEFAEEKFKRDGIDLKTNFKVVKVSDKDITMTNPATGEVAVPYGMAVWSTGIGTRPII 335
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
LD K G + DEWLRV +DV+A+GDC+ + + ++ +VA++
Sbjct: 336 --LDFMKQVGQENRRVLATDEWLRVQGCEDVYALGDCATIAQRKVMEDVASIFRVADK 391
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIG 290
+LPA AQVA ++G YL NR+ G R A PF YRHLG A +G
Sbjct: 463 MLPATAQVAAQEGSYLADCFNRMKTCEQYPEGPIRIRGAGRHRF-KPFRYRHLGQFAPLG 521
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 522 GEQTAYQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTRMLVISDWGRRFIFGRDSS 576
Query: 351 RI 352
I
Sbjct: 577 SI 578
>gi|226530785|ref|NP_001142169.1| uncharacterized protein LOC100274336 [Zea mays]
gi|194707450|gb|ACF87809.1| unknown [Zea mays]
Length = 578
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 142/238 (59%), Gaps = 12/238 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD L++++GA +TF GV EN FL+EV AQ+IR+ ++ + +P +SEE
Sbjct: 156 EFVVDYDYLIVSIGARPNTFNTPGVTENCHFLKEVEDAQKIRKSVMKCFERAALPNLSEE 215
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E+ + LH VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+++++IEA IL+ FD
Sbjct: 216 ERKKNLHFVVIGGGPTGVEFAAELHDFVNADLAKLYPDVKKYVNISVIEAGGHILTMFDK 275
Query: 138 RLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLV 192
R+ +A + + G+ L +VK D + N T VPYG+ VWSTG+G ++
Sbjct: 276 RITEFAEEKFKRDGIDLKTNFKVVKVSDKDITMTNPATGEVAVPYGMAVWSTGIGTRPII 335
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
LD K G + DEWLRV +DV+A+GDC+ + + ++ +VA++
Sbjct: 336 --LDFMKQVGQENRRVLATDEWLRVQGCEDVYALGDCATIAQRKVMEDVASIFRVADK 391
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIG 290
+LPA AQVA ++G YL NR+ G R A PF YRHLG A +G
Sbjct: 463 MLPATAQVAAQEGSYLADCFNRMKTCEQYPEGPIRIRGAGRHRF-KPFRYRHLGQFAPLG 521
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 522 GEQTAYQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTRMLVISDWGRRFIFGRDSS 576
Query: 351 RI 352
I
Sbjct: 577 SI 578
>gi|156034669|ref|XP_001585753.1| hypothetical protein SS1G_13269 [Sclerotinia sclerotiorum 1980]
gi|154698673|gb|EDN98411.1| hypothetical protein SS1G_13269 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 514
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 187/371 (50%), Gaps = 49/371 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKL++A G E +TFG GVKE A F++ V A+ +R +L L + +P ISE+
Sbjct: 154 EFDVKYDKLILAPGCETNTFGTPGVKEYALFMKTVPDARRLREGILDCLERASLPTISEQ 213
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
EK +LH +VGGGPTG+E + E+ + I + Y +K Y +++ + A+ +L F +
Sbjct: 214 EKKNILHFAIVGGGPTGIELAAEIDELIQEHLGAVYPRLKGYCTISIYDVADRLLGQFGE 273
Query: 138 RLRHYATTQLSKSG-VRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+L YA + G V + G ++++ +++ + EVP+G++VW+ G LV+ L
Sbjct: 274 KLSEYAMEKFENRGDVHVKTGKHIQEIKRNSMLIKEEGEVPFGVVVWAVGNTAGKLVEGL 333
Query: 196 DLPKSPG-GRIGIDEWLRVPS-----------------------VQDVFAVGDCSGYLES 231
+ KS G RI D+WLRV +++V+A+GD + L +
Sbjct: 334 ECRKSEGLQRILTDKWLRVLKTADFDAVKKQEQEQEQGNQTGDIIKNVYALGDAADILNN 393
Query: 232 TGKTVLPALAQVAERQGKYLF-SLLNRIGKAGGGRANSAK------DMELGDP----FVY 280
LP A+VA ++ K+L LL+ + ++SA + + P F Y
Sbjct: 394 E----LPTTAEVAVQKAKWLTRHLLDAALNSPLANSHSANETSETSETSISTPKTPSFQY 449
Query: 281 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 340
+ +A +GR ++ Q K G +WL WRS + WR R V VNW
Sbjct: 450 KQKDLIAYLGRGDGVI---QGK----TEWTGVSAWLAWRSGSIAWTRGWRRRVMVVVNWV 502
Query: 341 TTFVFGRDISR 351
FV GR+++R
Sbjct: 503 ANFVDGREVAR 513
>gi|357475923|ref|XP_003608247.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
gi|87240748|gb|ABD32606.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase;
Calcium-binding EF-hand [Medicago truncatula]
gi|355509302|gb|AES90444.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
Length = 578
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 140/236 (59%), Gaps = 13/236 (5%)
Query: 2 KVHCET-VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KV+C + + + L E +F + YD L+IA+GA +TF GV EN FL+EV AQ+IR
Sbjct: 137 KVYCRSNINNNLNEKE--EFVVDYDYLIIAVGANVNTFNTPGVTENCHFLKEVEDAQKIR 194
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + + +P +S+EE+ R+LH +VGGGPTGVEF+ L DF+ D+ + Y VKD
Sbjct: 195 RTVIDSFERASLPSVSDEERKRILHFAIVGGGPTGVEFAAALHDFVSEDLVKLYPGVKDL 254
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQ---KLILNDG-- 172
+ +TL+EA ILS FD R+ +A + + G+ + G + K D + K + N G
Sbjct: 255 VKITLLEAGGHILSMFDKRITTFAEDKFKRDGIDVKTGSMVTKVSDREITTKEMKNGGEI 314
Query: 173 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
T +PYG+ VWSTG+G +K R I DEWLRV +V+A+GDC+
Sbjct: 315 TTIPYGMAVWSTGIGTRPFIKDFMTQIGQVNRRAIATDEWLRVEGTDNVYALGDCA 370
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 464 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGE 523
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S+I
Sbjct: 524 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWMRRFIFGRDSSQI 578
>gi|444317136|ref|XP_004179225.1| hypothetical protein TBLA_0B08910 [Tetrapisispora blattae CBS 6284]
gi|387512265|emb|CCH59706.1| hypothetical protein TBLA_0B08910 [Tetrapisispora blattae CBS 6284]
Length = 566
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 201/357 (56%), Gaps = 36/357 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GA+++TFGI GV ENA+FL+E+ AQEIR+K++ ++ + EE+
Sbjct: 218 ELDYDYLVVGVGAQSNTFGIPGVYENASFLKEISDAQEIRQKIMASIENAISLPQGSEER 277
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVEF+ EL D+I D+ + + I VTL+EA IL+ FD L
Sbjct: 278 KRLLSYVVVGGGPTGVEFAAELKDYIDEDLNKWVPGISKEITVTLVEALPNILNMFDKSL 337
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGTEVPYGLLVWSTGVGPSTLVKS 194
YA K V L ++ +V+ VDS K+ + N+ E+PYGLLVW+TG G + K
Sbjct: 338 VQYAEELFRKEKVELQLKSMVQKVDSTKVTMKCDNNEIKELPYGLLVWATGNGQRQVTKD 397
Query: 195 L----DLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
L D S G + I+E L++ +D +FA+GDC T L A+VA ++G+
Sbjct: 398 LMAKVDKQDSRRGLL-INEKLQLLGHEDSIFAIGDC------TFHPGLVPTAEVAHQEGE 450
Query: 250 YL------FSLLNRIGKAGGGRANSAKDMEL----------GDPFVYRHLGSMATIGRYK 293
YL L+++ +S+K L D F + H G++A +GR K
Sbjct: 451 YLADQFKHLYKLDQVKYEISTTKDSSKLTSLNNKLTKLENSADDFKFVHRGALAYLGREK 510
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
A+ DL SK S +G ++L WR AYL+ +S+RNR+ + ++W + GR+ S
Sbjct: 511 AIADLSFG-NSKYTS-SGSFTFLFWRFAYLSMCISFRNRYLIFMDWVKMNILGRNSS 565
>gi|119186217|ref|XP_001243715.1| hypothetical protein CIMG_03156 [Coccidioides immitis RS]
Length = 680
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 193/392 (49%), Gaps = 80/392 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLVIA+G + TF GV++NA F +++ A+ ++R++ L+ +P S E
Sbjct: 308 FEVPYDKLVIAVGCVSRTFNTPGVRQNAMFFKDIGDAKRVKRRVRECFELAVMPTTSFEL 367
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LLH +VG GPTG E + L DF+ D+ Q Y +KD +TL + A ++LS FD
Sbjct: 368 RKNLLHFAIVGAGPTGTELAAALCDFLHDDMFQIYPTLKDSTRITLYDVAPKVLSMFDKT 427
Query: 139 LRHYATTQLSKSGVRLV--------------RGIVKDVDSQ---KLILNDGTEVPYGLLV 181
L YA T +S+ GV + + ++D + L +G E G+ V
Sbjct: 428 LSDYAMTVMSREGVEVKTNHHIQELRWGEPHKDPAPEMDPKGCLTLKTKEGGEEGVGMCV 487
Query: 182 WSTG----------VGP-------STLVK----SLDLPKSPGGRIG---------IDEWL 211
W+TG +GP S LV+ S + PKS +I +D L
Sbjct: 488 WATGNEMNKFVNDSLGPLEQFPTFSALVQPGHTSPNDPKSVAWKIKKAPKTGALLVDNHL 547
Query: 212 RV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR--IGK 260
RV +QDVFA+GD + LES PA AQ ++ +L LN+ IG+
Sbjct: 548 RVQLESEDGRRAVMQDVFALGD-NCMLESDSP---PATAQATNQEACWLAKRLNKGGIGQ 603
Query: 261 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE-SKGLSLAGFLSWLVWR 319
G F + + G +A +G KAL+ + ++ KG+ G +WL+W+
Sbjct: 604 EPG--------------FSFNNFGMIAYLGSSKALMQIPSSEHLPKGIK--GRTAWLIWK 647
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
AYLT +SWRNR + +W + + FGRDISR
Sbjct: 648 GAYLTMSLSWRNRLRILYSWMSNWAFGRDISR 679
>gi|326497827|dbj|BAJ94776.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 184
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/116 (70%), Positives = 96/116 (82%)
Query: 212 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKD 271
++ V DVFAVGDC G+LEST K VLPALAQVAERQG YL LLN + KAGGG ANS
Sbjct: 33 QLEEVPDVFAVGDCCGFLESTRKKVLPALAQVAERQGLYLARLLNSVMKAGGGHANSHVK 92
Query: 272 MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVV 327
++LG FVY+HLGSMAT+GRYKALVDLRQ+K SKG+S+AGF +W +WRSAY+TRVV
Sbjct: 93 VDLGPKFVYKHLGSMATVGRYKALVDLRQSKGSKGISIAGFANWFIWRSAYVTRVV 148
>gi|254577477|ref|XP_002494725.1| ZYRO0A08228p [Zygosaccharomyces rouxii]
gi|238937614|emb|CAR25792.1| ZYRO0A08228p [Zygosaccharomyces rouxii]
Length = 540
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 192/359 (53%), Gaps = 32/359 (8%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
+ + + YD LV +GA+ +TF GV ENA+FL+E+ AQEIR K++ + +
Sbjct: 189 QEYTLDLKYDYLVYGVGAQPTTFNTPGVYENASFLKEISDAQEIRVKIMTAIEKAATLSP 248
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 134
S+ E+ RLL VVVGGGPTGVE + EL D++ +D+++ + I VTL EA IL+
Sbjct: 249 SDPERQRLLTFVVVGGGPTGVELAAELKDYVDQDLKKWMPGLSKEIKVTLAEALPNILNM 308
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGPST 190
FD L YA + + L + +VK VD + G EVPYG+LVW+TG P
Sbjct: 309 FDRSLVEYAQDLFKQEKIDLWLNTMVKSVDKTHIRAKCGDEMIEVPYGVLVWATGNAPRD 368
Query: 191 LVKSLDLPKSP-GGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAER 246
+ K+L P R G I+E L++ +D +FA+GDC+ Y + P AQVA +
Sbjct: 369 VTKNLMNKLEPQDSRRGLLINEKLQLLGAEDSIFAIGDCTFY-----PGLFPT-AQVAHQ 422
Query: 247 QGKYLFSLLNRI-------------GKAGGGRANSAKDMELGD--PFVYRHLGSMATIGR 291
+G+YL L +I + S D GD F Y H+G++A IG+
Sbjct: 423 EGEYLAKALKKIHGVDQLKWQIAQAAEEDKQMLESRLDKLQGDFEHFKYNHMGALAYIGK 482
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA+ D+ + LAG ++L W+SAYL +S+RNR VA++W + GRD S
Sbjct: 483 EKAIADVSFGQSQ--YKLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWCKVYFLGRDSS 539
>gi|347837919|emb|CCD52491.1| similar to pyridine nucleotide-disulphide oxidoreductase
[Botryotinia fuckeliana]
Length = 481
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 181/349 (51%), Gaps = 39/349 (11%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKL++A G E +TFG GVKE A F++ V A+ +R +L L + +P ISE+E
Sbjct: 154 FDVRYDKLILAPGCETNTFGTPGVKEFALFMKTVPDARRLREGILDCLERASLPTISEQE 213
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LH +VGGGPTG+E + E+ + I + Y +K +++ + A+ +L FD++
Sbjct: 214 KRDMLHFAIVGGGPTGIELAAEIDELIQEHLGAVYPRLKGLCTISIYDVADRLLGQFDEK 273
Query: 139 LRHYATTQLSKSGVRLVR--GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA + G V+ ++++ + + + EVP+G++VW+ G LV+ L
Sbjct: 274 LSEYAMEKFQNRGCVKVKTGKHIEEIKRHSMTIKEEGEVPFGVVVWAVGNTAGKLVEDLQ 333
Query: 197 LPKSPG-GRIGIDEWLRVPS-------------VQDVFAVGDCSGYLESTGKTVLPALAQ 242
KS G RI D+WLRV + + +V+A+GD + L K LP A+
Sbjct: 334 CRKSKGLQRILTDKWLRVLAPDSDGVEGAGADIIDNVYALGDAADIL----KNELPTTAE 389
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VA ++ K+L L +NS +D LG PF Y +A IGR ++ +++
Sbjct: 390 VAVQKAKWLTQHL---------LSNSEQD--LGKPFTYEQKDLVAYIGRGDGVIQGKKD- 437
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
G +WL WRS + WR R V VNW +V GR+I+R
Sbjct: 438 ------WTGASAWLAWRSGSIAWTRGWRRRVMVVVNWVANWVDGREIAR 480
>gi|320583458|gb|EFW97671.1| Mitochondrial external NADH dehydrogenase, a type II
NAD(P)H:quinone oxidoreductase [Ogataea parapolymorpha
DL-1]
Length = 556
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 190/366 (51%), Gaps = 38/366 (10%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
+P + ++YD L+ A+GA+ +TFGI G+ E A+FL+E A +R+KL + S +
Sbjct: 198 DPIEKTLNYDYLIYAVGAKVNTFGIPGIPEYASFLKEAQDATAVRQKLFNAIEASRLLPE 257
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 134
EE+ RLL VV GGGPTGVE + E+ D+I +D+ + + + V L+EA +L+
Sbjct: 258 DSEERKRLLTFVVCGGGPTGVELAAEVKDYIDQDLLKFIPGIDKEMKVVLVEALPNVLNM 317
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTG 185
F +L Y V L +VK VD++ + + DGT +PYG LVW+ G
Sbjct: 318 FHPKLIEYTKEVFKTQHVDLRTNTMVKKVDARNVYASAKKPDGTTEEVVIPYGTLVWAGG 377
Query: 186 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
L +SL + + R G ++E++++ ++A+GDC+ T A
Sbjct: 378 NAQRELTRSLADKITEQKTARRGLLVNEYMKLDGDDHIYALGDCTF-------TANAPTA 430
Query: 242 QVAERQGKYLFSLLNRIGKAGG-------GRANSAKDMELG---------DPFVYRHLGS 285
QVA +QG++L N++ K + ++K+ L PF YRH G+
Sbjct: 431 QVAHQQGEFLADHFNKLAKIDDLEYLTSLEKDEASKEKHLKRLERYKNSIKPFSYRHQGA 490
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A +G +A+ DL S ++L G L++ WR+AY++ ++ R++ V +W +F
Sbjct: 491 LAYVGSERAVADLTWGSWST-VALGGNLTFFFWRTAYVSMILGVRSKLLVISDWIKVSMF 549
Query: 346 GRDISR 351
GRD S+
Sbjct: 550 GRDCSK 555
>gi|388505494|gb|AFK40813.1| unknown [Lotus japonicus]
Length = 574
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 139/236 (58%), Gaps = 13/236 (5%)
Query: 2 KVHCET-VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
K++C + + + L + +F + YD LVIA+GA +TF GV EN FL+EV AQ IR
Sbjct: 133 KIYCRSNINNNLNVKD--EFVVDYDYLVIAVGANVNTFNTPGVVENCHFLKEVEDAQRIR 190
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P ISEEE+ R+LH +VGGGPTGVEF+ L DF+ D+ + Y KD
Sbjct: 191 RTVIDCFERASLPSISEEERKRILHFAIVGGGPTGVEFAASLHDFVNEDLVKLYPKAKDL 250
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVD---SQKLILNDG-- 172
+ +TL+EA + ILS FD R+ +A + + G+ + G +VK D S K + N G
Sbjct: 251 VKITLLEAGDHILSMFDKRITAFAEDKFRRDGIDVKTGSMVVKVSDKEISTKEMKNGGEI 310
Query: 173 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
T +PYG+ VWSTG+G ++ R + DEWLRV +V+A+GDC+
Sbjct: 311 TSIPYGMAVWSTGIGTRPFIRDFMQQIGQINRRAVATDEWLRVEGTDNVYALGDCA 366
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-----------GGGRANSAKDMELGDPFVYRHLGS 285
LPA AQVA +QG YL +R+ + G GR PF Y+HLG
Sbjct: 460 LPATAQVASQQGTYLAKCFDRMEECEINPEGPLRFRGEGRHRFK-------PFRYKHLGQ 512
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
A +G +A L + S G S WL W S Y ++ VSWR R V +W F+F
Sbjct: 513 FAPLGGEQAAAQLPGDWVSIGHST----QWL-WYSIYASKQVSWRTRALVVTDWTRRFLF 567
Query: 346 GRDISRI 352
GRD S+I
Sbjct: 568 GRDSSQI 574
>gi|154311138|ref|XP_001554899.1| hypothetical protein BC1G_06687 [Botryotinia fuckeliana B05.10]
Length = 481
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 39/349 (11%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKL++A G E +TFG GVKE A F++ V A+ +R +L L + +P ISE+E
Sbjct: 154 FDVRYDKLILAPGCETNTFGTPGVKEFALFMKTVPDARRLREGILDCLERASLPTISEQE 213
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LH +VGGGPTG+E + E+ + I + Y +K +++ + A+ +L FD++
Sbjct: 214 KRDMLHFAIVGGGPTGIELAAEIDELIQEHLGAVYPRLKGLCTISIYDVADRLLGQFDEK 273
Query: 139 LRHYATTQLSKSGVRLVR--GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA + G V+ ++++ + + + EVP+G++VW+ G LV+ L
Sbjct: 274 LSQYAMEKFQNRGCVKVKTGKHIEEIKRHSMTIKEEGEVPFGVVVWAVGNTAGKLVEDLQ 333
Query: 197 LPKSPG-GRIGIDEWLRVPS-------------VQDVFAVGDCSGYLESTGKTVLPALAQ 242
KS G RI D+WLRV + +++V+A+GD + L K LP A+
Sbjct: 334 CRKSKGLQRILTDKWLRVLAPDSDGVEGAGADIIENVYALGDAAEIL----KNELPTTAE 389
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VA ++ K+L L +NS +D LG PF Y +A IGR ++ +++
Sbjct: 390 VAVQKAKWLTQHL---------LSNSEQD--LGKPFTYEQKDLVAYIGRGDGVIQGKKD- 437
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
G +WL WRS + WR + V VNW +V GR+I+R
Sbjct: 438 ------WTGASAWLAWRSGSIAWTRGWRRKVMVVVNWVANWVDGREIAR 480
>gi|425770675|gb|EKV09143.1| Pyridine nucleotide-disulfide oxidoreductase, putative [Penicillium
digitatum Pd1]
gi|425771982|gb|EKV10410.1| Pyridine nucleotide-disulfide oxidoreductase, putative [Penicillium
digitatum PHI26]
Length = 570
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 194/396 (48%), Gaps = 79/396 (19%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLVIA+GA + TFG GV+ENA F +++ A+ ++R++ L+ +P + E
Sbjct: 191 FEVPYDKLVIAVGAVSRTFGTPGVRENAMFFKDIGDAKRVKRRVRECFELAVLPFTTPEM 250
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL+ +VG GPTG+E + L DFI D+ Y + + +TL + A ++LS FD+
Sbjct: 251 RKWLLNFAIVGAGPTGIELAASLRDFIYSDMMALYPSLNEMPKITLYDVAPKVLSMFDES 310
Query: 139 LRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGTEVPYGLLV 181
L YA +++ G+ + V+ + +D ++ L + E+ G+ V
Sbjct: 311 LSRYAMETMTREGIDIKTSHHVKSLRWGAPGAPPPYHMDPKRCLTLTTEEDGELGVGMCV 370
Query: 182 WSTGVG-PSTLVKSLD------------------LPKSP------------GGRIGIDEW 210
W+TG G P + +SLD P++P G + +D
Sbjct: 371 WATGNGMPKFITESLDSVEAFPTDSVHSIEASSEAPQNPEIASWKFKKAPKNGPLLVDGH 430
Query: 211 LRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA 261
LRV ++DVFA+GD + + G PA AQ ++ K+L LN+
Sbjct: 431 LRVQLQNEAGQTAVLRDVFALGDNA--MPENGAP--PATAQATNQESKWLADRLNK---- 482
Query: 262 GGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS-----LAGFLSWL 316
D+ PF +R+LG+MA IG +AL+ + N + S + G + L
Sbjct: 483 --------GDLAQTPPFSFRNLGTMAYIGDERALMQIPHNGDRASNSFLPEGIKGRTASL 534
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W+ AY++ +SWRN+ VA W +FGRD+SR
Sbjct: 535 IWKMAYISMSISWRNKLRVAFRWTLNKIFGRDVSRF 570
>gi|340959425|gb|EGS20606.1| hypothetical protein CTHT_0024400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 571
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 193/419 (46%), Gaps = 100/419 (23%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR-RKLLLNLMLSDVPG---IS 76
+I YDKLVIA GA + TFGI GV+E+A FLR++ A+ IR R L L M S PG +S
Sbjct: 166 QIPYDKLVIACGAYSQTFGIEGVREHAHFLRDIGDARRIRLRVLSLFEMCSYPPGSDPLS 225
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSF 135
+++K LLH +VGGGPTG+EF+ EL D I D+ Y + ++ +T+ + A ++L F
Sbjct: 226 DDDKRTLLHFAIVGGGPTGIEFAAELHDLIHEDLAPIYPQLMRFVRITVYDVAPKVLPMF 285
Query: 136 DDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDG------------------TEVPY 177
D L YA + G+ + Q+L DG EV
Sbjct: 286 DQALAQYAMETFHRHGI----SVKTRHHLQRLRPADGPLGTRHGALKIKIKEYGDAEVGA 341
Query: 178 GLLVWSTGVGPSTLVKSL-------------------DLPKSPG---------------G 203
GL+VWSTG+ + + L P +P G
Sbjct: 342 GLVVWSTGLMANPFISKLASKEISSPSAHAAANNPFTPPPSAPNIVPPPTRHLLRDSRTG 401
Query: 204 RIGIDEWLRV----------------PSVQDVFA------VGDCSGYLESTGKTVLPALA 241
+ D LR P Q A +GDC+ LP A
Sbjct: 402 GLLTDGHLRALTAPTNPNPAIFNSPKPPSQTATALPDVFVIGDCAVL---ASNPALPKTA 458
Query: 242 QVAERQGKYLFSLLNRIGKAG------GGRANSAKDMELGD--PFVYRHLGSMATIGRYK 293
QVA +Q +L LN+ G R N K + G+ PF +R+LG++ +G +K
Sbjct: 459 QVASQQASHLAKALNKAYDPSPLRFPDGTRENMEKMIVTGELRPFKFRNLGTLTYLGSWK 518
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A+ +SK +L G+++W++WR+AYLT+ +S RN+ V V W +++FGR ISR
Sbjct: 519 AI------HQSKVDALRGWMAWVLWRTAYLTKSMSLRNKILVPVYWVVSWIFGRGISRF 571
>gi|392870423|gb|EAS32225.2| pyridine nucleotide-disulfide oxidoreductase [Coccidioides immitis
RS]
Length = 566
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 193/392 (49%), Gaps = 80/392 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLVIA+G + TF GV++NA F +++ A+ ++R++ L+ +P S E
Sbjct: 194 FEVPYDKLVIAVGCVSRTFNTPGVRQNAMFFKDIGDAKRVKRRVRECFELAVMPTTSFEL 253
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LLH +VG GPTG E + L DF+ D+ Q Y +KD +TL + A ++LS FD
Sbjct: 254 RKNLLHFAIVGAGPTGTELAAALCDFLHDDMFQIYPTLKDSTRITLYDVAPKVLSMFDKT 313
Query: 139 LRHYATTQLSKSGVRLV--------------RGIVKDVDSQ---KLILNDGTEVPYGLLV 181
L YA T +S+ GV + + ++D + L +G E G+ V
Sbjct: 314 LSDYAMTVMSREGVEVKTNHHIQELRWGEPHKDPAPEMDPKGCLTLKTKEGGEEGVGMCV 373
Query: 182 WSTG----------VGP-------STLVK----SLDLPKSPGGRIG---------IDEWL 211
W+TG +GP S LV+ S + PKS +I +D L
Sbjct: 374 WATGNEMNKFVNDSLGPLEQFPTFSALVQPGHTSPNDPKSVAWKIKKAPKTGALLVDNHL 433
Query: 212 RV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR--IGK 260
RV +QDVFA+GD + LES PA AQ ++ +L LN+ IG+
Sbjct: 434 RVQLESEDGRRAVMQDVFALGD-NCMLESDSP---PATAQATNQEACWLAKRLNKGGIGQ 489
Query: 261 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE-SKGLSLAGFLSWLVWR 319
G F + + G +A +G KAL+ + ++ KG+ G +WL+W+
Sbjct: 490 EPG--------------FSFNNFGMIAYLGSSKALMQIPSSEHLPKGIK--GRTAWLIWK 533
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
AYLT +SWRNR + +W + + FGRDISR
Sbjct: 534 GAYLTMSLSWRNRLRILYSWMSNWAFGRDISR 565
>gi|413952244|gb|AFW84893.1| hypothetical protein ZEAMMB73_805701 [Zea mays]
Length = 578
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 143/238 (60%), Gaps = 12/238 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD L++++GA +TF GV EN FL+EV AQ+IR+ ++ + +P +SEE
Sbjct: 156 EFVVDYDYLIVSVGARPNTFNTPGVTENCHFLKEVEDAQKIRKSVMKCFERAALPNLSEE 215
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E+ + LH V++GGGPTGVEF+ EL DF+ D+ + Y VK ++++++IEA IL+ FD
Sbjct: 216 ERKKNLHFVIIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKHVNISVIEAGGHILTMFDK 275
Query: 138 RLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLV 192
R+ +A + + G+ L +VK + L+ N T VPYG+ VWSTG+G ++
Sbjct: 276 RITQFAEEKFKRDGIDLKTNFKVVKVSNKDILMTNPATGEVAVPYGMAVWSTGIGTRPII 335
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+D K G + DEWLRV +DV+A+GDC+ + + A+ +VA++
Sbjct: 336 --MDFMKQVGQENRRVLATDEWLRVQGCEDVYALGDCATIAQRKVMEDVAAIFRVADK 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIG 290
+LPA AQVA ++G YL NR+ G R A PF Y+HLG A +G
Sbjct: 463 MLPATAQVAAQEGSYLADCFNRMKMCEEYPEGPIRIRGAGRHRF-KPFRYKHLGQFAPLG 521
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 522 GEQTAYQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTRMLVVSDWGRRFIFGRDSS 576
Query: 351 RI 352
I
Sbjct: 577 SI 578
>gi|303317938|ref|XP_003068971.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108652|gb|EER26826.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 566
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 193/392 (49%), Gaps = 80/392 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLVIA+G + TF GV++NA F +++ A+ ++R++ L+ +P S E
Sbjct: 194 FEVPYDKLVIAVGCVSRTFNTPGVRQNAMFFKDIGDAKRVKRRVRECFELAVMPTTSFEL 253
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LLH +VG GPTG E + L DF+ D+ Q Y +KD +TL + A ++LS FD
Sbjct: 254 RKNLLHFAIVGAGPTGTELAAALCDFLHDDMFQIYPKLKDSTRITLYDVAPKVLSMFDKT 313
Query: 139 LRHYATTQLSKSGVRLV--------------RGIVKDVDSQ---KLILNDGTEVPYGLLV 181
L YA T +S+ GV + + ++D + L +G E G+ V
Sbjct: 314 LSDYAMTVMSREGVEVKTNHHIQELRWGEPHKDPAPEMDPKGCLTLKTKEGGEEGVGMCV 373
Query: 182 WSTG----------VGP-------STLVK----SLDLPKSPGGRIG---------IDEWL 211
W+TG +GP S L + S + PKS +I +D L
Sbjct: 374 WATGNEMNKFVNDSLGPLEQFPTFSALFQPGHTSSNDPKSVAWKIKKAPKTGALLVDNHL 433
Query: 212 RV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR--IGK 260
RV +QDVFA+GD + LES PA AQ ++ +L LN+ IG+
Sbjct: 434 RVQLESEDGRGAVMQDVFALGD-NCMLESDSP---PATAQATNQEACWLAKRLNKGGIGQ 489
Query: 261 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE-SKGLSLAGFLSWLVWR 319
G F +++ G +A +G KAL+ + ++ KG+ G +WL+W+
Sbjct: 490 EPG--------------FSFKNFGMIAYLGSSKALMQIPSSEHLPKGIK--GRTAWLIWK 533
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
AYLT +SWRNR + +W + + FGRDISR
Sbjct: 534 GAYLTMSLSWRNRLRILYSWMSNWAFGRDISR 565
>gi|171685800|ref|XP_001907841.1| hypothetical protein [Podospora anserina S mat+]
gi|170942861|emb|CAP68514.1| unnamed protein product [Podospora anserina S mat+]
Length = 541
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 200/406 (49%), Gaps = 99/406 (24%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL--------LNLMLSD 71
++ YDKL+IA GA + TFGI GV+E+A FLR++ A+ +R ++L + +
Sbjct: 162 IEVQYDKLIIACGAYSQTFGIEGVREHAHFLRDIGDARRVRLRVLSLFEQCSYPSSSSPN 221
Query: 72 VPG--ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-A 128
G +++++K LLH VVGGGPTG+E++ EL DFI D+ + Y + ++ +T+ + A
Sbjct: 222 SNGHVLTDDDKRALLHFAVVGGGPTGIEWAAELHDFIRDDLGKMYPELMRFVKITVYDVA 281
Query: 129 NEILSSFDDRLRHYATTQLSKSGVRL----------------------VRGIVKDVDSQK 166
++L FD L YA ++ G+ + VR +++V+
Sbjct: 282 PKVLPMFDKALADYAMGHFARQGIEVKTEHHLERIRLADGKLGRRHGAVRIKIREVE--- 338
Query: 167 LILNDGTEVPYGLLVWSTGVGPSTLVKSL-------DLPKSP----------------GG 203
+G EV G++VWSTG+ + L+ L K+P G
Sbjct: 339 ---ENGGEVGAGMVVWSTGLMANPLIAKLAEKEVVVSKSKNPMTGEVLERRRLVRDKRSG 395
Query: 204 RIGIDEWLRVPSV-----------------QDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+ +D ++R SV V+ +GDCS ++E LP AQVA +
Sbjct: 396 GLVVDGYMRALSVDADAKPEEGNELEKKPLDGVYVIGDCS-FIE---HDPLPKTAQVAAQ 451
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 306
+ +YL LN+ G + G F +R+ G+M +G +KA+ +SK
Sbjct: 452 EAQYLAKELNKGISPG----------QDGKEFKFRNWGTMTYLGGWKAI------HQSKA 495
Query: 307 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L G+++W++WR AYLT+ +SWRN+ V + W +++FGR ISR
Sbjct: 496 DELKGWVAWVLWRGAYLTKAMSWRNKLLVPIYWVISWIFGRGISRF 541
>gi|452986735|gb|EME86491.1| hypothetical protein MYCFIDRAFT_210507 [Pseudocercospora fijiensis
CIRAD86]
Length = 428
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 182/342 (53%), Gaps = 32/342 (9%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+I+YD+LV+A G +TF G E+A F+R V A++++ +L L L+ +P +S++
Sbjct: 111 QFEITYDRLVLAPGCITNTFHTPGADEHAFFVRNVADAKKVQYRLKQLLELASLPDVSKQ 170
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDD 137
E+ LLH V+VGGGPTGVE S E+SD D+ + Y ++ + + + +A IL +F+D
Sbjct: 171 EQRELLHIVIVGGGPTGVEISAEMSDLFNEDMTKLYPNLAGKMSIAIHDAAPFILGAFED 230
Query: 138 RLRHYATTQLSKSGVRLVR-GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
LR ++ +K V ++ +K V+S + + G+++W+ G LV SLD
Sbjct: 231 ALRQHSIKSFAKRNVNVITDSKIKKVESDHIETEVEGRIGCGMVIWTAGNKQCPLVDSLD 290
Query: 197 LPKSPG-GRIGIDEWLRVPSVQ-----DVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ K+ RI D++LRV Q DV+A+GD + K LP A+VA ++ +Y
Sbjct: 291 VCKTDKLPRIMTDQYLRVLDAQKQPMKDVYALGDAA----DIKKYFLPTTAEVAVQKAEY 346
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
L + +NR +E PF YR +A IG + ++ Q K+ +
Sbjct: 347 LANAINR-------------GIEGQRPFQYRQKSLVAYIGGHDGVI---QGKD----DWS 386
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G +W WRS L SWR +F + W +V G++I+R+
Sbjct: 387 GPRAWAAWRSKNLLWTRSWRRKFMIMAYWYLDWVGGKEIARL 428
>gi|422294398|gb|EKU21698.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526]
Length = 578
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 190/364 (52%), Gaps = 38/364 (10%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F YD LV GA++ TFG GV+E+A FL+E+ A ++R+ L+ +++P +S E
Sbjct: 223 EFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSME 282
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
EK R+L VVVGGGPTGVEFSGE SDF+ RD+ + Y + D + +I+A + IL FD
Sbjct: 283 EKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDA 342
Query: 138 RLRHYATTQLSKSGVRLV--RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
L+ L G+ ++ R ++K V+ + + L+ G +PYGL VW+ G P + KSL
Sbjct: 343 ALQEQGLEVLKAQGIEVMLNRKVLK-VEEKHIELDGGEILPYGLCVWAAGTAPRDITKSL 401
Query: 196 --DLPKSPG------GRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAER 246
+P+ GR+ +D WLRV + A+GD +E G LPA QVA +
Sbjct: 402 IAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDA---VEVEGLP-LPATGQVAAQ 457
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMEL------------------GDPFVYRHLGSMAT 288
G +L LLNR + N D+E F + +LG +A
Sbjct: 458 HGAFLGRLLNR--EYDLSTPNPTFDLEKVNAFGKVANVLRLRGRLEAQAFSFLNLGLLAY 515
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G+ AL ++ G L+WRS YL + VS RNR V +W T VFGRD
Sbjct: 516 VGQANALAQVQTGNLKFG-EYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRD 574
Query: 349 ISRI 352
ISR
Sbjct: 575 ISRF 578
>gi|66824431|ref|XP_645570.1| pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
domain-containing protein [Dictyostelium discoideum AX4]
gi|166240217|ref|XP_001733038.1| pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
domain-containing protein [Dictyostelium discoideum AX4]
gi|60473690|gb|EAL71630.1| pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
domain-containing protein [Dictyostelium discoideum AX4]
gi|165988488|gb|EDR41034.1| pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
domain-containing protein [Dictyostelium discoideum AX4]
Length = 584
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 203/383 (53%), Gaps = 62/383 (16%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F++ YD L++ +GA+ TFGI GVKENA FL+E++ + IR K++ L + PG E+
Sbjct: 213 EFELEYDHLIVGVGADNQTFGIPGVKENACFLKEINDTRNIRDKIIDCLETASYPGQPEK 272
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLL+ VVVGGGP+GVEF+ EL+DF+ D+ + Y K I+VTL+EA IL+ FD
Sbjct: 273 EIDRLLNFVVVGGGPSGVEFTAELNDFLQSDLLKTYPLAK-RINVTLVEALPHILTIFDK 331
Query: 138 RLRHYATTQLSKS------------GVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTG 185
++ + +L S GVR VK+ +++ ++ PYGLLVW+TG
Sbjct: 332 KIIDHVEKRLQSSNNTKIWTKTAVVGVREKEITVKNTTTKEESIH-----PYGLLVWATG 386
Query: 186 VGPSTLVKSLDL---PKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
P + + P R G +D++ RV ++++GD S L
Sbjct: 387 NTPRKITTQIMQSIGPNIQNNRRGLVVDDYFRVAGTDGIWSIGDAS----INPSKPLAQT 442
Query: 241 AQVAERQGKYLFSLLNRIGKAGGG-----RAN-----------------------SAKDM 272
AQVA +QG+YL L N++ + R N S K
Sbjct: 443 AQVASQQGRYLGRLFNQLAEEMNNDLIKKRENPDAHKEEKEKQQEKLNLFNSITGSNKSF 502
Query: 273 ELG---DP-FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 328
E P F Y+H+G++A +G ++A+ + + + S +S G++++ +WRS Y T+++S
Sbjct: 503 EEAVKEKPLFKYKHMGTLAYVGDHQAVAEFKGD-HSTTVS-EGYITYYLWRSVYFTKLLS 560
Query: 329 WRNRFYVAVNWATTFVFGRDISR 351
RNR V+ +W + VFGRDISR
Sbjct: 561 VRNRALVSFDWLKSSVFGRDISR 583
>gi|365766458|gb|EHN07954.1| Nde2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 527
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 206/375 (54%), Gaps = 38/375 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV ++V+++ E + +SYD LV+++GA+ +TF I GV NA FL+E+ AQ IR
Sbjct: 164 KVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIRM 219
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KL+ + + +++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + +
Sbjct: 220 KLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEM 279
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEV 175
V LIEA IL+ FD L YA ++ + L V VK V+ + L +G T++
Sbjct: 280 KVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDI 339
Query: 176 PYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLR-VPSVQDVFAVGDCSGYLES 231
YG+LVW+TG P K+L +P+ R + I++ L + S ++A+GDC+ +
Sbjct: 340 EYGMLVWATGNEPIDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH--- 396
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNR---IGKAGGGRANSAKDMELG------------- 275
TG P AQVA ++G+YL +L++ I + NS + E+
Sbjct: 397 TG--FFPT-AQVAHQEGEYLAKILDKKLQIEQLEWDMLNSTDETEVSRLQKEVNLRKSKL 453
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
D F Y+H+G++A IG A+ DL S L G ++L W+SAYL +S RNR +
Sbjct: 454 DKFNYKHMGALAYIGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILI 511
Query: 336 AVNWATTFVFGRDIS 350
A++W + GRD S
Sbjct: 512 AMDWTKVYFLGRDSS 526
>gi|401840143|gb|EJT43051.1| NDE2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 545
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 197/355 (55%), Gaps = 34/355 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+++GA+ +TF I GV NA FL+E+ AQ IR KL+ + + +++ E+
Sbjct: 198 LNYDYLVVSVGAKTTTFNIPGVYGNAYFLKEIEDAQNIRMKLMKTIEQASSFPVNDPERR 257
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLL VVVGGGPTGVEF+ EL D++ +D+R+ + + V LIEA IL+ FD L
Sbjct: 258 RLLTFVVVGGGPTGVEFAAELQDYVNQDLRKWMPDLSQEMSVILIEALPNILNMFDKTLI 317
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKL-ILNDG---TEVPYGLLVWSTGVGPSTLVKSL 195
YA ++ + LV VK V+ + L + T +PYG+LVW+TG P L K+L
Sbjct: 318 KYAEDIFARDEIDLLVNTAVKVVEPTYIRTLQNSQTTTNIPYGMLVWATGNEPIELSKTL 377
Query: 196 --DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+P+ R + I++ L + +D ++A+GDC+ + TG P AQVA ++G+YL
Sbjct: 378 MGRIPEQTNKRGLLINDKLELLGAEDSIYAIGDCTAH---TG--FFPT-AQVAHQEGEYL 431
Query: 252 FSLLNR---IGKAGGGRANSAKDMELG-------------DPFVYRHLGSMATIGRYKAL 295
+L++ I + NS + ++ D F Y+H+G++A IG A+
Sbjct: 432 SKILDKKLQIEQMEWDMQNSTDNAKMTRLQKEIDVKKSKLDKFNYKHMGALAYIGSETAI 491
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
DL S L G ++L W+SAYL +S RNR +A++W + GRD S
Sbjct: 492 ADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRDSS 544
>gi|6320118|ref|NP_010198.1| NADH-ubiquinone reductase (H(+)-translocating) NDE2 [Saccharomyces
cerevisiae S288c]
gi|74676439|sp|Q07500.1|NDH2_YEAST RecName: Full=External NADH-ubiquinone oxidoreductase 2,
mitochondrial; AltName: Full=External NADH dehydrogenase
2; Flags: Precursor
gi|1431110|emb|CAA98651.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151941917|gb|EDN60273.1| type II NAD(P)H:quinone oxidoreductase [Saccharomyces cerevisiae
YJM789]
gi|190405091|gb|EDV08358.1| type II NAD(P)H:quinone oxidoreductase [Saccharomyces cerevisiae
RM11-1a]
gi|256274109|gb|EEU09020.1| Nde2p [Saccharomyces cerevisiae JAY291]
gi|259145160|emb|CAY78424.1| Nde2p [Saccharomyces cerevisiae EC1118]
gi|285810950|tpg|DAA11774.1| TPA: NADH-ubiquinone reductase (H(+)-translocating) NDE2
[Saccharomyces cerevisiae S288c]
gi|323338454|gb|EGA79679.1| Nde2p [Saccharomyces cerevisiae Vin13]
gi|323349457|gb|EGA83681.1| Nde2p [Saccharomyces cerevisiae Lalvin QA23]
gi|392300032|gb|EIW11123.1| Nde2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 545
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 206/375 (54%), Gaps = 38/375 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV ++V+++ E + +SYD LV+++GA+ +TF I GV NA FL+E+ AQ IR
Sbjct: 182 KVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIRM 237
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KL+ + + +++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + +
Sbjct: 238 KLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEM 297
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEV 175
V LIEA IL+ FD L YA ++ + L V VK V+ + L +G T++
Sbjct: 298 KVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDI 357
Query: 176 PYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLR-VPSVQDVFAVGDCSGYLES 231
YG+LVW+TG P K+L +P+ R + I++ L + S ++A+GDC+ +
Sbjct: 358 EYGMLVWATGNEPIDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH--- 414
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNR---IGKAGGGRANSAKDMELG------------- 275
TG P AQVA ++G+YL +L++ I + NS + E+
Sbjct: 415 TG--FFPT-AQVAHQEGEYLAKILDKKLQIEQLEWDMLNSTDETEVSRLQKEVNLRKSKL 471
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
D F Y+H+G++A IG A+ DL S L G ++L W+SAYL +S RNR +
Sbjct: 472 DKFNYKHMGALAYIGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILI 529
Query: 336 AVNWATTFVFGRDIS 350
A++W + GRD S
Sbjct: 530 AMDWTKVYFLGRDSS 544
>gi|401626294|gb|EJS44247.1| nde1p [Saccharomyces arboricola H-6]
Length = 560
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 196/363 (53%), Gaps = 42/363 (11%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
+ + YD LV+ +GA+ +TFG GV E ++FL+E+ AQEIR K++ ++ + +
Sbjct: 209 YDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKD 268
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ FD
Sbjct: 269 PERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMFD 328
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGP--- 188
L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P
Sbjct: 329 KYLVDYAQDLFKEEKIDLKLKTMVKKVDATTITAKTGGGDIESIPYGVLVWATGNAPREV 388
Query: 189 -STLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL---AQV 243
+ L+ L+ S G + I+ L++ QD +FA+GDC T P L AQV
Sbjct: 389 STNLMSKLEEQDSRRGLL-INNKLQLLGAQDSIFAIGDC---------TFHPGLFPTAQV 438
Query: 244 AERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMA 287
A ++G+YL F RI + +N D D F Y H G++A
Sbjct: 439 AHQEGEYLAQYFKKAYRIDQLNWKISNIKDDSGASKLKDQITKIESQIDDFKYNHKGALA 498
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GR
Sbjct: 499 YIGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGR 556
Query: 348 DIS 350
D S
Sbjct: 557 DSS 559
>gi|403167292|ref|XP_003327097.2| NADH dehydrogenase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166949|gb|EFP82678.2| NADH dehydrogenase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 587
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 189/358 (52%), Gaps = 36/358 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TFGI GV+E+ FL+E++ A++IR+KL+ + + S E
Sbjct: 238 EIGYDYLIYAVGAENNTFGIPGVREHGCFLKELNDAEKIRKKLMDCIETATFKDQSPSEV 297
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVE++ EL DF++ D+ + Y + + +TLIEA +L F +L
Sbjct: 298 DRLLHMVVVGGGPTGVEYAAELHDFLVDDLSRWYPEIAGKVKITLIEALPNVLPMFSKQL 357
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKS 194
Y T + + L + +VK V + + D E+PYGLLVW+TG L +
Sbjct: 358 IDYTTQTFMSNRINVLTKTMVKQVHPKSITALDENKQLMEIPYGLLVWATGNTSRELTRQ 417
Query: 195 L--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
L LP+ R G +D+ L V ++A+GDC+ T AQ A +QG+Y
Sbjct: 418 LMAALPEHQTQRRGLLVDDDLSVLGADGIYALGDCTA-------TSYAPTAQAASQQGQY 470
Query: 251 L---FSLLNR---------IGKAGGGRANSAKDMELGD-----PFVYRHLGSMATIGRYK 293
L F L+ + + K G ++ + F Y H GS+A IG K
Sbjct: 471 LARRFGLMAKREKLENQLVLAKQNGNLEEQEATLKSINRTNLKEFKYSHQGSLAYIGSDK 530
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
A+ DL + ++ G ++ WRSAY++ S+RNR V +W +FGRD+SR
Sbjct: 531 AIADL--PFFNGNIATGGVATYFFWRSAYVSMAFSFRNRVLVCTDWVKVKLFGRDVSR 586
>gi|207346986|gb|EDZ73312.1| YDL085Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 545
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 206/375 (54%), Gaps = 38/375 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV ++V+++ E + +SYD LV+++GA+ +TF I GV NA FL+E+ AQ IR
Sbjct: 182 KVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIRM 237
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KL+ + + +++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + +
Sbjct: 238 KLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEM 297
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEV 175
V LIEA IL+ FD L YA ++ + L V VK V+ + L +G T++
Sbjct: 298 KVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDI 357
Query: 176 PYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLR-VPSVQDVFAVGDCSGYLES 231
YG+LVW+TG P K+L +P+ R + I++ L + S ++A+GDC+ +
Sbjct: 358 EYGMLVWATGNEPIDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH--- 414
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNR---IGKAGGGRANSAKDMELG------------- 275
TG P AQVA ++G+YL +L++ I + NS + E+
Sbjct: 415 TG--FFPT-AQVAHQEGEYLAKILDKKLQIEQLEWYMLNSTDETEVSRLQKEVNLRKSKL 471
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
D F Y+H+G++A IG A+ DL S L G ++L W+SAYL +S RNR +
Sbjct: 472 DKFNYKHMGALAYIGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILI 529
Query: 336 AVNWATTFVFGRDIS 350
A++W + GRD S
Sbjct: 530 AMDWTKVYFLGRDSS 544
>gi|367050430|ref|XP_003655594.1| hypothetical protein THITE_2119447 [Thielavia terrestris NRRL 8126]
gi|347002858|gb|AEO69258.1| hypothetical protein THITE_2119447 [Thielavia terrestris NRRL 8126]
Length = 537
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 187/397 (47%), Gaps = 89/397 (22%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP----GISE 77
I YDKLVIA GA + TFGI GV+E+A FLR++ A+ IR ++L P +S+
Sbjct: 164 IRYDKLVIACGAYSQTFGIEGVREHAHFLRDIGDARRIRLRVLSLFEQCSYPRGADHLSD 223
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFD 136
+K +LLH +VGGGPTG+EF+ EL D I D+ Y + + +T+ + A ++L FD
Sbjct: 224 ADKRQLLHFAIVGGGPTGIEFAAELHDLIRDDLAPLYPDLMPLVSITVYDVAPKVLPMFD 283
Query: 137 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDG------------------TEVPYG 178
L YA ++ +R + Q+L L DG EV G
Sbjct: 284 QALAQYAMDHFARQNIR----VKTQHHLQRLRLADGEFGRRHGALKIKIKECGDEEVGAG 339
Query: 179 LLVWSTGVGPSTLVKSLD-------------------------LPKSPGGRIGIDEWLRV 213
++VWSTG+ + L+ L L S G I D +LR
Sbjct: 340 IVVWSTGIMANPLIAKLAAKELTSAGRNPPPNPSQPAPAALRLLRDSRTGGIVTDAYLRA 399
Query: 214 -----------------PSV-QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
P + +DV+ +GDC+ +E+ + LP AQVA +Q +L L
Sbjct: 400 RLSGTTAEGGSGDRAASPGILEDVYVIGDCA-VMEN--EPTLPKTAQVASQQATHLARRL 456
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N PF +R+ G++ +G +KA+ +S+ L G+++W
Sbjct: 457 N----------AGGAAGVAAKPFRFRNWGTLTYLGSWKAI------HQSRADELRGWVAW 500
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+VWR AYLT+ +S RN+ V + W +++FGR ISR
Sbjct: 501 VVWRGAYLTKSMSVRNKILVPIYWLVSWIFGRGISRF 537
>gi|380495625|emb|CCF32254.1| hypothetical protein CH063_00778 [Colletotrichum higginsianum]
Length = 418
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 194/358 (54%), Gaps = 35/358 (9%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V C+T +P F++ YDK+ IA G E FG G KE+A FL+ + A+ I+++
Sbjct: 86 VRCKTDAPTANE-DPTYFEVRYDKICIAPGCETQDFGTPGAKEHALFLKTTNDARLIQQR 144
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
+L L + +P SE+++ L+ +VGGG G+E + EL D D+R + H+ ++
Sbjct: 145 ILQMLDKASLPTTSEQDQRDYLNIRIVGGGAIGIEAAAELWDLWFEDMRFLFPHLDGKLN 204
Query: 123 VTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLL 180
+T+ + A +ILS+FD L YAT+ L V+L+ G ++ V++ + + +PYGLL
Sbjct: 205 ITIHDVAPKILSTFDASLSEYATSSLEGKHVKLMTGSNIQRVEADAIFTKEDGRLPYGLL 264
Query: 181 VWSTGVGPSTLVKSLDLPKSPGG--RIGIDEWLRV-----PSVQDVFAVGDCSGYLESTG 233
+W+TG + LV L + K G RI D++LRV + V+A+GD + + G
Sbjct: 265 IWATGNKVNPLVDRLAVKKPESGLPRILTDKYLRVLRPDGSPMDGVYALGDAA---DIEG 321
Query: 234 KTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 293
++ LP LA+VA ++G+YL +LN G+ PF Y+ +A +GR
Sbjct: 322 ES-LPTLAEVALQKGEYLTVVLNSNGEPA--------------PFNYKQRALLAYLGRRD 366
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
++ R KE G+S +WL WRS L SWR + ++++W ++ GRDI+R
Sbjct: 367 GIIGGR--KEWTGVS-----AWLAWRSGSLGWTRSWRRKIMISISWIFIWIAGRDIAR 417
>gi|429860610|gb|ELA35340.1| pyridine nucleotide-disulfide [Colletotrichum gloeosporioides Nara
gc5]
Length = 424
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 181/345 (52%), Gaps = 33/345 (9%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
EP F + YDKL IA G + FG G ++A FL+ + A+ I++++L + + +P
Sbjct: 103 EPEFFDVEYDKLCIAPGCDIQDFGTPGASKHAFFLKTTNDARLIQQRILEIMDKASLPTA 162
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSS 134
+E+E+ LL +VGGG G+E + EL D ++R + + + +T+ + A ILS+
Sbjct: 163 TEQEQRDLLSIRIVGGGAIGIEAAAELWDLWFEEMRFLFPQLDGKLTITIHDVAPSILST 222
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
FD RL YAT L V L + V+ +I + +P GL++W+TG S+LV+
Sbjct: 223 FDARLSEYATQSLEGKQVALKTCSHISSVEPDGIITKEDGRLPSGLIIWATGNKASSLVQ 282
Query: 194 SLDLPKSPGG--RIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
L++ K G RI D++LRV ++DV+A+GD + LP LA+VA +
Sbjct: 283 KLNVKKPEHGLPRILTDKYLRVLRPDGSPMKDVYALGDAA----DIDGVSLPTLAEVALQ 338
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 306
+G+YL + LN GR K PF Y+ +A +GR+ ++ RQ E G
Sbjct: 339 KGEYLTTTLN-------GREEDVK------PFGYKQRVLLAYLGRHDGIIGGRQ--EWTG 383
Query: 307 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+S +WL WRS L SWR + + ++W ++ GRDI R
Sbjct: 384 MS-----AWLAWRSGSLGWTRSWRRKIMIMISWIFVWLGGRDIVR 423
>gi|169768169|ref|XP_001818555.1| disulfide oxidoreductase [Aspergillus oryzae RIB40]
gi|83766411|dbj|BAE56553.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391870518|gb|EIT79699.1| NADH-dehydrogenase [Aspergillus oryzae 3.042]
Length = 417
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 183/356 (51%), Gaps = 36/356 (10%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
C+ +EL+ +F++SYD++++ G ++TFGI GV ENA F++ V +A +R +L
Sbjct: 88 CQPAFEELKED---RFEVSYDRVILTPGCRSNTFGIPGVAENAIFVKTVANANTVRTRLN 144
Query: 65 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 124
L ++ +PGISE + +LLH V+VGGGPTG+E + EL+D D+ + H+K V+
Sbjct: 145 DILEMASLPGISEARQRQLLHIVIVGGGPTGIEVAAELTDLFEGDLGILFPHLKGLTSVS 204
Query: 125 LIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVW 182
+I+ A +IL+ FD RL YA + L + V++ + + +V + + YG+L+W
Sbjct: 205 VIDVAPQILAPFDQRLSEYACSALKTNKVKVKLNCHIVNVTKDTIETRESGITGYGMLIW 264
Query: 183 STGVGPSTLVKSLDLPKSPGG--RIGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKT 235
+TG LV L L K+ G RI D+ L V S + +VFA+GD + T
Sbjct: 265 ATGNRSIPLVDQLQLRKTEHGLVRILTDDHLNVFSPDGNVIPNVFAMGDAADIEGGT--- 321
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
LP A+VA ++ YL L N + KD PF Y+ + G + +
Sbjct: 322 -LPTTAEVAIQKADYLIRLFN----------SGLKDTR---PFKYQQRSLVTYTGAWDGV 367
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
V ++ G+ +WL WRS SWR R + W ++ GR+I R
Sbjct: 368 VQGQR-------EYTGYGAWLSWRSGNFFWTRSWRRRVLMCYAWFMDWLDGREIIR 416
>gi|356557658|ref|XP_003547132.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 576
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 140/236 (59%), Gaps = 13/236 (5%)
Query: 2 KVHC-ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KV+C +V + L E +F + YD L++A+GA +TF GV EN FL+EV A++IR
Sbjct: 135 KVYCRSSVNNNLNGKE--EFVVDYDYLIVAVGANVNTFNTPGVTENCHFLKEVEDAKKIR 192
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ +++P +SE+EK R+LH +VGGGPTGVEF+ L DF+ D+ + Y +KD
Sbjct: 193 RTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLLRLYPGIKDL 252
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLI----LNDGTE- 174
+ +TL+EA + IL FD R+ +A + + G+ + G + S+K I L +G E
Sbjct: 253 VKITLLEAGDHILGMFDKRITTFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGGEI 312
Query: 175 --VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+PYG+ VWSTG+G +K R + DEWLRV +V+A+GDC+
Sbjct: 313 KTIPYGMAVWSTGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCSNVYALGDCA 368
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 462 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGHHRFKPFRYKHLGQFAPLGGE 521
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 522 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI 576
>gi|5734587|emb|CAB52797.1| external rotenone-insensitive NADPH dehydrogenase [Solanum
tuberosum]
Length = 577
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 131/218 (60%), Gaps = 13/218 (5%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LV+A+GA+ +TF GV E+ FL+EV AQ IRR ++ S +PG+SEEE
Sbjct: 157 FSLQYDYLVVAVGAQVNTFNTPGVMEHCHFLKEVEDAQRIRRTVIDCFEKSVIPGLSEEE 216
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDR 138
+ LH V+VGGGPTGVEF+ EL D++ D+ + Y VKD++ +T+I++ + IL++FD+R
Sbjct: 217 RRTNLHFVIVGGGPTGVEFAAELHDYVYEDLVKIYPSVKDFVKITVIQSGDHILNTFDER 276
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLI------LNDGTEVPYGLLVWSTGVGPSTLV 192
+ +A + + G+ + G S I EVPYG++VWSTGVG V
Sbjct: 277 ISSFAEQKFQRDGIEVSTGCRVTSVSDHFINMKVKSTGKHVEVPYGMVVWSTGVGTRPFV 336
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
K D + G + DEWLRV +V+A+GDC+
Sbjct: 337 K--DFMEQVGQEKRRILATDEWLRVKGCSNVYALGDCA 372
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGR 291
LPA AQVA +QG YL LNR + G R S+ E PF YRHLG A +G
Sbjct: 463 LPATAQVAAQQGTYLARCLNRWDQCKSNPEGPRRFKSSGRHEFL-PFEYRHLGQFAPLGG 521
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+A +L + S G S WL W S Y ++ VSWR R+ V +W ++FGRD SR
Sbjct: 522 DQAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRYLVVGDWVRRYIFGRDSSR 576
Query: 352 I 352
I
Sbjct: 577 I 577
>gi|6323794|ref|NP_013865.1| NADH-ubiquinone reductase (H(+)-translocating) NDE1 [Saccharomyces
cerevisiae S288c]
gi|732163|sp|P40215.1|NDH1_YEAST RecName: Full=External NADH-ubiquinone oxidoreductase 1,
mitochondrial; AltName: Full=External NADH dehydrogenase
1; Flags: Precursor
gi|606443|emb|CAA87359.1| similar to rotenone-insensitive NADH-ubiquinone [Saccharomyces
cerevisiae]
gi|51013021|gb|AAT92804.1| YMR145C [Saccharomyces cerevisiae]
gi|151945846|gb|EDN64078.1| NADH:ubiquinone oxidoreductase [Saccharomyces cerevisiae YJM789]
gi|190408371|gb|EDV11636.1| NADH:ubiquinone oxidoreductase [Saccharomyces cerevisiae RM11-1a]
gi|207342266|gb|EDZ70079.1| YMR145Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148723|emb|CAY81968.1| Nde1p [Saccharomyces cerevisiae EC1118]
gi|285814146|tpg|DAA10041.1| TPA: NADH-ubiquinone reductase (H(+)-translocating) NDE1
[Saccharomyces cerevisiae S288c]
gi|349580429|dbj|GAA25589.1| K7_Nde1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297307|gb|EIW08407.1| Nde1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 560
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 197/362 (54%), Gaps = 40/362 (11%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
+ + YD LV+ +GA+ +TFG GV E ++FL+E+ AQEIR K++ ++ + +
Sbjct: 209 YDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKD 268
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ FD
Sbjct: 269 PERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMFD 328
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTL 191
L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P +
Sbjct: 329 KYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATGNAPREV 388
Query: 192 VKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQVA 244
K+L L + R + ID L++ + +FA+GDC T P L AQVA
Sbjct: 389 SKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQVA 439
Query: 245 ERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 288
++G+YL F +I + ++ D E+ + F Y H G++A
Sbjct: 440 HQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALAY 499
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GRD
Sbjct: 500 IGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGRD 557
Query: 349 IS 350
S
Sbjct: 558 SS 559
>gi|349576995|dbj|GAA22164.1| K7_Nde2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 545
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 206/375 (54%), Gaps = 38/375 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV ++V+++ E + ++YD LV+++GA+ +TF I GV NA FL+E+ AQ IR
Sbjct: 182 KVMVQSVSED----EYFVSSLNYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIRM 237
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KL+ + + +++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + +
Sbjct: 238 KLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEM 297
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEV 175
V LIEA IL+ FD L YA ++ + L V VK V+ + L +G T++
Sbjct: 298 KVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDI 357
Query: 176 PYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLR-VPSVQDVFAVGDCSGYLES 231
YG+LVW+TG P K+L +P+ R + I++ L + S ++A+GDC+ +
Sbjct: 358 EYGMLVWATGNEPIDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH--- 414
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNR---IGKAGGGRANSAKDMELG------------- 275
TG P AQVA ++G+YL +L++ I + NS + E+
Sbjct: 415 TG--FFPT-AQVAHQEGEYLAKILDKKLQIEQLEWDILNSTDETEVSRLQKEVNLRKSKL 471
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
D F Y+H+G++A IG A+ DL S L G ++L W+SAYL +S RNR +
Sbjct: 472 DKFNYKHMGALAYIGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILI 529
Query: 336 AVNWATTFVFGRDIS 350
A++W + GRD S
Sbjct: 530 AMDWTKVYFLGRDSS 544
>gi|256272015|gb|EEU07031.1| Nde1p [Saccharomyces cerevisiae JAY291]
Length = 560
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 197/362 (54%), Gaps = 40/362 (11%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
+ + YD LV+ +GA+ +TFG GV E ++FL+E+ AQEIR K++ ++ + +
Sbjct: 209 YDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKD 268
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ FD
Sbjct: 269 PERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMFD 328
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTL 191
L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P +
Sbjct: 329 KYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATGNAPREV 388
Query: 192 VKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQVA 244
K+L L + R + ID L++ + +FA+GDC T P L AQVA
Sbjct: 389 SKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQVA 439
Query: 245 ERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 288
++G+YL F +I + ++ D E+ + F Y H G++A
Sbjct: 440 HQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALAY 499
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GRD
Sbjct: 500 IGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGRD 557
Query: 349 IS 350
S
Sbjct: 558 SS 559
>gi|428182199|gb|EKX51060.1| hypothetical protein GUITHDRAFT_150973 [Guillardia theta CCMP2712]
Length = 511
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 202/363 (55%), Gaps = 38/363 (10%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+++YDKLV+A+GAE +TF GV+++A FL+E+ A+ IR ++ + P +EE
Sbjct: 156 EFQMAYDKLVVAVGAENNTFNTPGVEQHAHFLKEIIDARRIRAAIVDAFESACNPAQTEE 215
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E+ RLL+ VVVGGGPTGVEF+ EL+D + D+ + + +K+ + + LIEA +++L FD
Sbjct: 216 ERKRLLNFVVVGGGPTGVEFAAELADLLHEDLTKSFPKLKNDVKIRLIEATDKVLGMFDS 275
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQK-LILNDGTE----VPYGLLVWSTGVGPSTL 191
++ + K G+ L VK+V ++ L+ G++ +P ++VW+TG+ +
Sbjct: 276 KVSAFTAQTFEKEGIEVLANTFVKEVKQKEVLVQKKGSKEIESIPSSVVVWATGIRSRPI 335
Query: 192 ---------VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
VK P++ + D +LRV V+A+GDC+ GK LPA AQ
Sbjct: 336 TNKIRECIGVKEQTNPRA----LLTDGFLRVRGADGVYAMGDCATI---DGKP-LPATAQ 387
Query: 243 VAERQGKYLFSLLNRIGKAGGGRA--NSAKDME-------LGDPFVYRHLGSMATIGRYK 293
VA ++GKYL LN + A + N+ + M +PF Y H GS+A G
Sbjct: 388 VASQEGKYLSKYLNGLPTAHEDSSVLNAVRKMYWKVAGGFTSEPFEYAHRGSLAYTGGDS 447
Query: 294 ALVDLRQNK----ESKGLS-LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
A D + +S G+S + G + ++WRS Y++ +S R + +AV+WA VFGRD
Sbjct: 448 AAADFKGAMNGFFDSIGMSVMTGKATNILWRSFYMSEQLSMRTKALLAVDWAKAKVFGRD 507
Query: 349 ISR 351
SR
Sbjct: 508 FSR 510
>gi|323303514|gb|EGA57307.1| Nde1p [Saccharomyces cerevisiae FostersB]
gi|323336105|gb|EGA77377.1| Nde1p [Saccharomyces cerevisiae Vin13]
gi|323347214|gb|EGA81489.1| Nde1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763863|gb|EHN05389.1| Nde1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 554
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 197/362 (54%), Gaps = 40/362 (11%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
+ + YD LV+ +GA+ +TFG GV E ++FL+E+ AQEIR K++ ++ + +
Sbjct: 203 YDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKD 262
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ FD
Sbjct: 263 PERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMFD 322
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTL 191
L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P +
Sbjct: 323 KYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATGNAPREV 382
Query: 192 VKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQVA 244
K+L L + R + ID L++ + +FA+GDC T P L AQVA
Sbjct: 383 SKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQVA 433
Query: 245 ERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 288
++G+YL F +I + ++ D E+ + F Y H G++A
Sbjct: 434 HQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALAY 493
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GRD
Sbjct: 494 IGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGRD 551
Query: 349 IS 350
S
Sbjct: 552 SS 553
>gi|224013718|ref|XP_002296523.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968875|gb|EED87219.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 415
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 183/351 (52%), Gaps = 43/351 (12%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKE----NATFLREVHHAQEIRRKLLLNLMLSDVPG 74
KF ++YD LV+A G +++TF H ++ FL+ ++HA++IR +++ + P
Sbjct: 91 KFDVAYDYLVVAAGKKSNTFNTHNIQRLEGVVVFFLKHLYHARQIRNRIVECFERASNPT 150
Query: 75 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS 133
I + ++ RLL +VVGGGPT EF EL DFI +DV Y + +I +TL+EA IL
Sbjct: 151 IPDVQRDRLLSFIVVGGGPTSCEFMSELHDFINKDVANWYPDLVKHIKLTLVEAGPGILG 210
Query: 134 SFDDRLRHYATTQLSKSG--VRLVRGIV----KDVDSQKLI---LNDGTEVPYGLLVWST 184
SFD L Y +L++ VRL I + +D +++ DG+E+ + L+ ++
Sbjct: 211 SFDKALSEYYLKKLNEKNIDVRLNTAISGVDERYIDGEQITVARFADGSEINFVKLISNS 270
Query: 185 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQV 243
+ +LD R+ +D++LR+P + FA+GDC+ L LP A V
Sbjct: 271 NL-------TLD-----RDRVIVDDYLRIPETKGRAFALGDCAASLNDK----LPPTATV 314
Query: 244 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP-FVYRHLGSMATIGRYKALVDLRQNK 302
AE+Q YL N+ ++ P F Y++ G+MA++G + DL
Sbjct: 315 AEQQAIYLSDCFNKY----------YCKFDVSSPKFQYKNRGAMASMGFGGGVTDLTNTD 364
Query: 303 -ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
S +++G S+LVW S YLT+ +S +N + + W +FGRDISR
Sbjct: 365 LPSPKTTMSGQASYLVWTSTYLTKQLSVQNMILIPMYWFKALLFGRDISRF 415
>gi|357144667|ref|XP_003573372.1| PREDICTED: external NADH-ubiquinone oxidoreductase 1,
mitochondrial-like [Brachypodium distachyon]
Length = 580
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 133/218 (61%), Gaps = 12/218 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LV+A+GA ++TF GV+EN FL+EV AQ+IRR ++ + +P ++EE
Sbjct: 157 EFLVDYDYLVVAVGARSNTFNTPGVEENCHFLKEVEDAQKIRRSVMNCFEKASLPYLNEE 216
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
EK + LH V+VGGGPTGVEF+ EL DF+ D+ + Y ++ + ++LIE A+ IL+ FD
Sbjct: 217 EKKKNLHFVIVGGGPTGVEFAAELHDFVTEDLSKLYPSIQHLVKISLIEAADHILTMFDK 276
Query: 138 RLRHYATTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
R+ ++A + ++G+ + G + KD + + VPYG+ VWSTG+G +
Sbjct: 277 RITNFAEDKFGRNGIDVKTGYKVVKVSKDAITMQNPATGDIAVPYGMAVWSTGIGTRPFI 336
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+D K G + DEWLRV D++AVGDC+
Sbjct: 337 --VDFMKQIGQANRRVLATDEWLRVRECDDIYAVGDCA 372
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL N++ A + G PF YRHLG A +G
Sbjct: 466 LPATAQVAAQQGQYLARCFNKMPDAEENPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGE 525
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L +S+ WL W S Y T+ +SWR R V +W F+FGRD S I
Sbjct: 526 QTAAQL----PGDWISIGHSSQWL-WYSVYATKQISWRTRALVISDWGRRFIFGRDSSCI 580
>gi|225561456|gb|EEH09736.1| external NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus
G186AR]
Length = 556
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 194/395 (49%), Gaps = 79/395 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKL+IA+G TF GV++NA F ++V A++++R++ L+ +P ++ +
Sbjct: 177 FEVPYDKLIIAVGCTPRTFNTPGVRDNALFFKDVGDARKVKRRIRECFELAAMPRVTSQM 236
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL +VG GPTG E S L DFI D+ + Y +K + + L + A +LS+FD
Sbjct: 237 RRHLLRFAIVGAGPTGTELSASLCDFIHEDMFKVYPQLKGDVRIILYDVAPTVLSTFDKS 296
Query: 139 LRHYATTQLSKSGV--RLVRGI------------VKDVDSQKLI---LNDGTEVPYGLLV 181
L YA L + GV ++ R I + ++D + + + E G+ V
Sbjct: 297 LSRYAMETLKREGVTIKMNRHIEELRWGEPNTEGLHEMDPKSCLTLRTKEEGEEGVGMCV 356
Query: 182 WSTG--VGP---------------STLVKSLDLP------------KSPG-GRIGIDEWL 211
W+TG +GP S L K P K+P G + +D L
Sbjct: 357 WATGNEIGPFVNKALNTIDPFPILSALSKETGSPVTEPQITTWKVHKTPKVGALLVDSHL 416
Query: 212 R---------VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAG 262
R + +QDVFA+GD + LES PA AQ ++ +L ++LNR
Sbjct: 417 RLQLKSAGGQIAVLQDVFALGD-TCMLESGSP---PATAQATSQEAIWLANVLNR----- 467
Query: 263 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL------RQNKESKGLSLAGFLSWL 316
+++L F +++LG +A IG KAL+ L N + G+ +WL
Sbjct: 468 -------GNLDLSPGFSFKNLGVLAYIGSSKALMQLPHEGGSEPNDNGFFRGIKGYPAWL 520
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+W+ AYL+ +SWRNR + ++W + ++FGRD+SR
Sbjct: 521 IWKGAYLSMSMSWRNRLRILLSWFSNWLFGRDVSR 555
>gi|323332094|gb|EGA73505.1| Nde1p [Saccharomyces cerevisiae AWRI796]
Length = 424
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 197/362 (54%), Gaps = 40/362 (11%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
+ + YD LV+ +GA+ +TFG GV E ++FL+E+ AQEIR K++ ++ + +
Sbjct: 73 YDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKD 132
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ FD
Sbjct: 133 PERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMFD 192
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTL 191
L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P +
Sbjct: 193 KYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATGNAPREV 252
Query: 192 VKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQVA 244
K+L L + R + ID L++ + +FA+GDC T P L AQVA
Sbjct: 253 SKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQVA 303
Query: 245 ERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 288
++G+YL F +I + ++ D E+ + F Y H G++A
Sbjct: 304 HQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALAY 363
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GRD
Sbjct: 364 IGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGRD 421
Query: 349 IS 350
S
Sbjct: 422 SS 423
>gi|325090897|gb|EGC44207.1| external NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus
H88]
Length = 556
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 193/395 (48%), Gaps = 79/395 (20%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKL+IA+G TF GV+ NA F ++V A++++R++ L+ +P ++ +
Sbjct: 177 FEVPYDKLIIAVGCTPRTFNTPGVRNNALFFKDVGDARKVKRRIRECFELAAMPRVTSQM 236
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LL +VG GPTG E S L DFI D+ + Y +K + + L + A +LS+FD
Sbjct: 237 RRHLLRFAIVGAGPTGTELSASLCDFIHEDMFKVYPQLKGDVRIILYDVAPTVLSTFDKS 296
Query: 139 LRHYATTQLSKSGV--RLVRGI------------VKDVDSQKLI---LNDGTEVPYGLLV 181
L YA L + GV ++ R I + ++D + + + E G+ V
Sbjct: 297 LSRYAMETLKREGVTIKMNRHIEELRWGEPNTEGLHEMDPKSCLTLRTKEEGEEGVGMCV 356
Query: 182 WSTG--VGP---------------STLVKSLDLP------------KSPG-GRIGIDEWL 211
W+TG +GP S L K P K+P G + +D L
Sbjct: 357 WATGNEIGPFVNKALNTIDPFPILSALSKDTGSPVTEPQNTTWKVHKTPKVGALLVDSHL 416
Query: 212 R---------VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAG 262
R + +QDVFA+GD + LES PA AQ ++ +L ++LNR
Sbjct: 417 RLQLKSAGGQIAVLQDVFALGD-TCMLESGSP---PATAQATSQEAIWLANVLNR----- 467
Query: 263 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL------RQNKESKGLSLAGFLSWL 316
+++L F +++LG +A IG KAL+ L N + G+ +WL
Sbjct: 468 -------GNLDLSPGFSFKNLGVLAYIGSSKALMQLPHEGGSEPNNNGFFRGIKGYPAWL 520
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+W+ AYL+ +SWRNR + ++W + ++FGRD+SR
Sbjct: 521 IWKGAYLSMSMSWRNRLRILLSWFSNWLFGRDVSR 555
>gi|365759046|gb|EHN00860.1| Nde1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 560
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 197/362 (54%), Gaps = 40/362 (11%)
Query: 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 77
+ + YD LV+ +GA+ +TFG GV E ++FL+E+ AQEIR K++ ++ + +
Sbjct: 209 YDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKD 268
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 136
E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ FD
Sbjct: 269 PERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMFD 328
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTL 191
L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P +
Sbjct: 329 KYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIESIPYGVLVWATGNAPREV 388
Query: 192 VKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQVA 244
++L L + R + ID L++ + +FA+GDC T P L AQVA
Sbjct: 389 SRNLMSKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQVA 439
Query: 245 ERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 288
++G+YL F RI + ++S D E + F Y H G++A
Sbjct: 440 HQEGEYLAQHFKKAYRIDQLNWKMSSSKDDSETAKLNNQVAKVESQIEDFKYNHKGALAY 499
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ D+ E+K LAG ++L W+SAYL +S+RNR VA++WA + GRD
Sbjct: 500 IGSDKAIADIAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGRD 557
Query: 349 IS 350
S
Sbjct: 558 SS 559
>gi|405118144|gb|AFR92919.1| NADH dehydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 553
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 187/363 (51%), Gaps = 57/363 (15%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISEE 78
I YD LV A+G E TFGI GV E A FL+E+ A +IR KL+ + + + ++
Sbjct: 214 IPYDYLVYAVGCENQTFGIKGVPEYACFLKELSDADKIRTKLMDFYIGIETASFKNQPQD 273
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RL+H VVVGGGPTGVE++GEL DF++ +TLIEA +L +F
Sbjct: 274 EIDRLMHMVVVGGGPTGVEYAGELHDFLI---------------ITLIEALPNVLPAFSK 318
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLV 192
+L Y + ++ + L R +VKDV +Q +I+ D E+PYGLLVW+TG +
Sbjct: 319 QLIEYTESTFKENKIDVLTRTMVKDVKAQSVIVQDANKEIREIPYGLLVWATGNTSRNIT 378
Query: 193 KSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ L L R G +D+ L + + V+AVGDC+ T AQVA +QG
Sbjct: 379 RDLMTKLSHVQTQRRGLLVDDNLALLGAEGVYAVGDCTA-------TSYAPTAQVASQQG 431
Query: 249 KYLFSLLNRIGKAG-------GGRANSAKDMELGD-------------PFVYRHLGSMAT 288
YL S+ ++G+ RA+ D + PF Y H GS+A
Sbjct: 432 IYLASIFQKLGQKAKLEKQLAALRADPTADASEIESLTKKVNRASKITPFHYSHQGSLAY 491
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
IG KA+ DLR + ++ G + L WRSAY++ + S RNR V +W +FGRD
Sbjct: 492 IGSEKAIADLRLF--NGNVASGGSAAMLFWRSAYVSTLYSVRNRTLVLTDWLKVKLFGRD 549
Query: 349 ISR 351
+SR
Sbjct: 550 VSR 552
>gi|406603334|emb|CCH45126.1| NADH dehydrogenase [Wickerhamomyces ciferrii]
Length = 543
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 190/356 (53%), Gaps = 41/356 (11%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL-----LNLMLSDVPGI 75
+I YD LV A+GAE +TFGI GV+ + FL+E+ +++IR K + NL+ D P
Sbjct: 196 QIKYDYLVTAVGAEPNTFGIPGVETHGCFLKEISDSRKIRHKFIEAVERANLLPKDDP-- 253
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 134
E+ RLL VVVGGGPTGVE +GEL D+I +D++ ++ D + + LIEA +L+
Sbjct: 254 ---ERKRLLTLVVVGGGPTGVETAGELQDYIDQDLKTFMPNIVDEVQIVLIEALPVVLNM 310
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DG----TEVPYGLLVWSTG 185
F+ +L YA L ++ + L R V V+ + LI DG T++PYG+LVW+TG
Sbjct: 311 FEKKLTSYAEKVLKETSIDLKTRTAVSKVEDEYLIAKTKNEDGSVEETKIPYGVLVWATG 370
Query: 186 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
P L+ +L +P+ G ++E L V +FA+GD LP A
Sbjct: 371 NKPRPLITNLFKKIPEQNHANRGLIVNENLLVEGTNSIFAIGD-------NAFAKLPPTA 423
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRY 292
QVA ++ +YL + ++I K G + E D PF Y HLG++A +G
Sbjct: 424 QVAHQEAEYLCKVFSKIAKTPGFHEKLSTTSEKVDLLFQEHGIKPFKYIHLGALAYLGAE 483
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
KA+ ++ S S G ++ VWR Y++ ++S R+RF V +W FGRD
Sbjct: 484 KAIANITYGSRS-FYSGGGIFTFFVWRVLYVSMILSVRSRFKVIADWLKISFFGRD 538
>gi|323355847|gb|EGA87660.1| Nde2p [Saccharomyces cerevisiae VL3]
Length = 545
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 205/375 (54%), Gaps = 38/375 (10%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV ++V+++ E + +SYD LV+++GA+ +TF I GV NA FL+E+ AQ IR
Sbjct: 182 KVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIRM 237
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
KL+ + + +++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + +
Sbjct: 238 KLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEM 297
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEV 175
V LIEA IL+ FD L YA ++ + L V VK V+ + L +G T++
Sbjct: 298 KVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDI 357
Query: 176 PYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLR-VPSVQDVFAVGDCSGYLES 231
YG+LVW+TG P K+L +P+ R + I++ L + S ++A+GDC+ +
Sbjct: 358 EYGMLVWATGNEPIDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH--- 414
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNR---IGKAGGGRANSAKDMELG------------- 275
TG P AQVA ++G+YL +L++ I + NS + +
Sbjct: 415 TG--FFPT-AQVAHQEGEYLAKILDKKLQIEQLEWDMLNSTDETXVSRLQKEVNLRKSKL 471
Query: 276 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 335
D F Y+H+G++A IG A+ DL S L G ++L W+SAYL +S RNR +
Sbjct: 472 DKFNYKHMGALAYIGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILI 529
Query: 336 AVNWATTFVFGRDIS 350
A++W + GRD S
Sbjct: 530 AMDWTKVYFLGRDSS 544
>gi|242773479|ref|XP_002478248.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Talaromyces stipitatus ATCC 10500]
gi|218721867|gb|EED21285.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Talaromyces stipitatus ATCC 10500]
Length = 580
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 193/412 (46%), Gaps = 85/412 (20%)
Query: 10 DELRTLEPWK-FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 68
+ LRT E + F + YDKLVIA+G + TFG GV+ENA F +++ ++ ++R++
Sbjct: 185 EHLRTWEKGQLFDVPYDKLVIAVGCTSQTFGTPGVRENAMFFKDIGDSRRVKRRVRECFE 244
Query: 69 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE- 127
L+ +P +EE + LLH +VG GPTG E + L DF+ +++ + Y +KD ++L +
Sbjct: 245 LAALPTTTEEMQRYLLHFAIVGAGPTGTELAATLRDFVSKNMAELYPALKDKTRISLYDV 304
Query: 128 ANEILSSFDDRLRHYATTQLSKSGV---------RLVRGIVK-----DVDSQ---KLILN 170
A +LS FD L YA +SK G+ L GI ++D + L
Sbjct: 305 APTVLSMFDKSLSQYAIGTMSKDGIDIRTSHHIQELRWGIPNTEGPHEMDPKGCLTLKTK 364
Query: 171 DGTEVPYGLLVWSTGVGPSTLVK-SLD-------------------------LPKSPG-G 203
+ +V G+ VW+TG + +K SL+ + K+P G
Sbjct: 365 EQGDVGVGMCVWATGNAMNKFIKYSLNEIDEFPASSALLKDSSSLVDIKGWRVKKAPKVG 424
Query: 204 RIGIDEWLR----------VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
+ +D + R V +QDVFA+GD + + TG PA AQ ++ K+L
Sbjct: 425 ALLVDGYFRVQLEHESTGQVAVLQDVFAIGDNA--MPETGAP--PATAQATSQEAKWLAE 480
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG------- 306
N D+ F + ++G++A IG AL+ + K +
Sbjct: 481 RFNN------------GDLNKVPSFSFHNMGTLAYIGSSNALMQIPHEKVNTNGGKDGAR 528
Query: 307 ------LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L G ++WLVW+ AYL+ +SWRNRF + W VFG D+SR
Sbjct: 529 RNPYLPEGLTGRMAWLVWKVAYLSMSISWRNRFRILFRWTLNRVFGSDVSRF 580
>gi|238481825|ref|XP_002372151.1| disulfide oxidoreductase, putative [Aspergillus flavus NRRL3357]
gi|220700201|gb|EED56539.1| disulfide oxidoreductase, putative [Aspergillus flavus NRRL3357]
Length = 417
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 182/356 (51%), Gaps = 36/356 (10%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
C+ +EL+ +F++SYD++++ G ++TFGI GV ENA F++ V +A +R +L
Sbjct: 88 CQPAFEELKED---RFEVSYDRVILTPGCRSNTFGIPGVAENAIFVKTVANANTVRTRLN 144
Query: 65 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 124
L ++ +PG SE + +LLH V+VGGGPTG+E + EL+D D+ + H+K V+
Sbjct: 145 DILEMASLPGTSEARQRQLLHIVIVGGGPTGIEVAAELTDLFEGDLGILFPHLKGLTSVS 204
Query: 125 LIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVW 182
+I+ A +IL+ FD RL YA + L + V++ + + +V + + YG+L+W
Sbjct: 205 VIDVAPQILAPFDQRLSEYACSALKTNKVKVKLNCHIVNVTKDTIETRESGITGYGMLIW 264
Query: 183 STGVGPSTLVKSLDLPKSPGG--RIGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKT 235
+TG LV L L K+ G RI D+ L V S + +VFA+GD + T
Sbjct: 265 ATGNRSIPLVDQLQLRKTEHGLVRILTDDHLNVFSPDGNVIPNVFAMGDAADIEGGT--- 321
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
LP A+VA ++ YL L N + KD PF Y+ + G + +
Sbjct: 322 -LPTTAEVAIQKADYLIRLFN----------SGLKDTR---PFKYQQRSLVTYTGAWDGV 367
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
V ++ G+ +WL WRS SWR R + W ++ GR+I R
Sbjct: 368 VQGQR-------EYTGYGAWLSWRSGNFFWTRSWRRRVLMCYAWFMDWLDGREIIR 416
>gi|398391508|ref|XP_003849214.1| hypothetical protein MYCGRDRAFT_76066 [Zymoseptoria tritici IPO323]
gi|339469090|gb|EGP84190.1| hypothetical protein MYCGRDRAFT_76066 [Zymoseptoria tritici IPO323]
Length = 419
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 174/342 (50%), Gaps = 32/342 (9%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F +SYD+L++A G +TFG G +E+ FL+ V +A++++ +L L L+ VPGI+++
Sbjct: 102 RFDVSYDRLILAPGCVTNTFGTPGAEEHCFFLKNVANARKVQYRLKQMLELASVPGITDQ 161
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDD 137
E+ LLH +VVGGGPTGVE S E+SD D R Y H+ + + + +A IL F+
Sbjct: 162 EQRELLHIIVVGGGPTGVEISAEISDLYNHDFRLLYPHLAGKMTIAIHDAAPSILGDFEK 221
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L+ ++ S+ V+ ++ V+ + + G+++W+ G LV LD
Sbjct: 222 ALQKHSIESFSQRNVQTFTDSKIQKVERDSITTEGEGRIGCGMVLWTAGNKQCALVDELD 281
Query: 197 LPKSPG-GRIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ K+ RI DE+L V ++DV+A+GD + K LP A+VA ++ +Y
Sbjct: 282 VSKTDKLPRIMTDEYLHVLDRDKKPMRDVYALGDAA----DIKKYFLPTTAEVAVQKAQY 337
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
L LNR D + PFVY +A IG +V + N E
Sbjct: 338 LVHALNR-------------DTDGQKPFVYGEKSIIAYIGGQDGVV--QGNSE-----WT 377
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G +W WR L+ +WR + + V W + G++I+R+
Sbjct: 378 GSRAWAAWRGKNLSWTRNWRRKLIIMVYWVLNYTGGKEIARL 419
>gi|456735021|gb|EMF59791.1| NADH dehydrogenase [Stenotrophomonas maltophilia EPM1]
Length = 426
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 171/325 (52%), Gaps = 22/325 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A +RRKLLL ++ +K+
Sbjct: 99 LDYDSLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEP-DPAKKA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF + L
Sbjct: 158 AWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++LD+P
Sbjct: 218 SLKARRQLEKLGVEVLTGTPVSDIDSQGFTLGD-QFVPARTVVWAAGVAASPLARTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 277 LDRAGRVPVQPDLTLPDHPELFVAGDLAALTQADGKPV-PGVAPAAKQMGKYVAEVI--- 332
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
RA E G PF Y G++ATIGR A+V L + L L+G L+W W
Sbjct: 333 ------RARLHGKPEPG-PFKYADYGNLATIGRMAAIVHLGR------LQLSGVLAWWFW 379
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTF 343
+A++ ++ +RNR V +NWA +
Sbjct: 380 LAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|413943311|gb|AFW75960.1| hypothetical protein ZEAMMB73_563877 [Zea mays]
Length = 584
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 134/218 (61%), Gaps = 13/218 (5%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LV+ALGA STF GV E+ FL+EV AQ+IR+ ++ + +P ISEEE
Sbjct: 160 FMLDYDYLVVALGATVSTFNTPGVLEHCCFLKEVEDAQKIRKGVIDCFEKASLPNISEEE 219
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDR 138
K ++LH VV+GGGPTGVEF+ E+ DF++ D+ + Y ++D + +T+I++ E IL+ FD+R
Sbjct: 220 KRKILHFVVIGGGPTGVEFAAEMHDFLVEDLVKLYPAIQDLVKITIIQSAEHILTMFDER 279
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL----NDGTE--VPYGLLVWSTGVGPSTLV 192
+ +A + + G+ + G S LI +DG E VPYG+ VWS G+G +V
Sbjct: 280 IASFAEQKFKRDGIEVCTGFRVIKVSDDLITMKRKSDGEELSVPYGMAVWSAGIGTRPVV 339
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+D + G + +EWLRV + V+A+GDC+
Sbjct: 340 --MDFMQQIGQTNRRALATNEWLRVRECEGVYAIGDCA 375
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 238 PALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGRY 292
PA AQVA +QG+YL N++ K G R PF Y+H G A +G
Sbjct: 470 PATAQVAAQQGQYLAQCFNKMEKCREEPEGPLRMAGGSGRHFFRPFRYKHFGQFAPLGGE 529
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A +L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 530 QAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI 584
>gi|115469590|ref|NP_001058394.1| Os06g0684000 [Oryza sativa Japonica Group]
gi|52076656|dbj|BAD45556.1| putative external rotenone-insensitive NADPH dehydrogenase [Oryza
sativa Japonica Group]
gi|113596434|dbj|BAF20308.1| Os06g0684000 [Oryza sativa Japonica Group]
gi|218198773|gb|EEC81200.1| hypothetical protein OsI_24219 [Oryza sativa Indica Group]
gi|222636105|gb|EEE66237.1| hypothetical protein OsJ_22405 [Oryza sativa Japonica Group]
Length = 588
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 134/217 (61%), Gaps = 12/217 (5%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LV+ALGA +TF GV EN FL+EV AQ+IRR ++ + +P ISEEE
Sbjct: 164 FMVDYDYLVVALGATVNTFNTPGVMENCYFLKEVEDAQKIRRNVIDCFEKASLPNISEEE 223
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDR 138
K ++LH V++GGGPTGVEF+ E+ DF++ D+ + Y ++D++ +T+I++ E IL+ FD R
Sbjct: 224 KRKILHFVIIGGGPTGVEFAAEMHDFLVEDLVKLYPAIQDFVKITIIQSGEHILNMFDQR 283
Query: 139 LRHYATTQLSKSGVRLVRG--IVK---DVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
+ +A + + G+ + G +VK D+ + K VPYG+ VWS G+G ++
Sbjct: 284 IATFAEMKFQRDGIEVNTGFRVVKVSDDLITMKSKSLGEVSVPYGMAVWSAGIGTRPVI- 342
Query: 194 SLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+D + G + +EWLRV +++A+GDC+
Sbjct: 343 -MDFMQQIGQTNRRVLATNEWLRVHECDNIYAIGDCA 378
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-------------GGGRANSAKDMELGDPFVYRHL 283
+PA AQVA +QG YL N++ + G GR N PF Y+HL
Sbjct: 472 IPATAQVAAQQGHYLAECFNKMDQCKEHPEGPLRMTGTGSGRHNFR-------PFRYKHL 524
Query: 284 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G A +G +A +L + S G S WL W S Y ++ VSWR R V +W F
Sbjct: 525 GQFAPLGGEQAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRMLVVSDWTRRF 579
Query: 344 VFGRDISRI 352
+FGRD SRI
Sbjct: 580 IFGRDSSRI 588
>gi|413943310|gb|AFW75959.1| hypothetical protein ZEAMMB73_563877 [Zea mays]
Length = 577
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 134/218 (61%), Gaps = 13/218 (5%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LV+ALGA STF GV E+ FL+EV AQ+IR+ ++ + +P ISEEE
Sbjct: 153 FMLDYDYLVVALGATVSTFNTPGVLEHCCFLKEVEDAQKIRKGVIDCFEKASLPNISEEE 212
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDR 138
K ++LH VV+GGGPTGVEF+ E+ DF++ D+ + Y ++D + +T+I++ E IL+ FD+R
Sbjct: 213 KRKILHFVVIGGGPTGVEFAAEMHDFLVEDLVKLYPAIQDLVKITIIQSAEHILTMFDER 272
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL----NDGTE--VPYGLLVWSTGVGPSTLV 192
+ +A + + G+ + G S LI +DG E VPYG+ VWS G+G +V
Sbjct: 273 IASFAEQKFKRDGIEVCTGFRVIKVSDDLITMKRKSDGEELSVPYGMAVWSAGIGTRPVV 332
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+D + G + +EWLRV + V+A+GDC+
Sbjct: 333 --MDFMQQIGQTNRRALATNEWLRVRECEGVYAIGDCA 368
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 238 PALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGRY 292
PA AQVA +QG+YL N++ K G R PF Y+H G A +G
Sbjct: 463 PATAQVAAQQGQYLAQCFNKMEKCREEPEGPLRMAGGSGRHFFRPFRYKHFGQFAPLGGE 522
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A +L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 523 QAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI 577
>gi|424670339|ref|ZP_18107364.1| hypothetical protein A1OC_03958 [Stenotrophomonas maltophilia
Ab55555]
gi|401070797|gb|EJP79311.1| hypothetical protein A1OC_03958 [Stenotrophomonas maltophilia
Ab55555]
Length = 426
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 171/325 (52%), Gaps = 22/325 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A +RRKLLL ++ +K+
Sbjct: 99 LDYDSLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEP-DPAKKA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF + L
Sbjct: 158 AWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++LD+P
Sbjct: 218 SLKARRQLEKLGVEVLTGTPVSDIDSQGFTLGD-QFVPARTVVWAAGVAASPLARTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 277 LDRAGRVPVQPDLTLPDHPELFVAGDLAALSQADGKPV-PGVAPAAKQMGKYVAEVI--- 332
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
RA E G PF Y G++ATIGR A+V L + L L+G L+W W
Sbjct: 333 ------RARLHGKPEPG-PFKYADYGNLATIGRMAAIVHLGR------LQLSGVLAWWFW 379
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTF 343
+A++ ++ +RNR V +NWA +
Sbjct: 380 LAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|190576026|ref|YP_001973871.1| pyridine nucleotide-disulfide oxidoreductase [Stenotrophomonas
maltophilia K279a]
gi|190013948|emb|CAQ47588.1| putative pyridine nucleotide-disulphide oxidoreductase
[Stenotrophomonas maltophilia K279a]
Length = 426
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 171/325 (52%), Gaps = 22/325 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A +RRKLLL ++ +K+
Sbjct: 99 LDYDSLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEP-DPAKKA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF + L
Sbjct: 158 AWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++LD+P
Sbjct: 218 SLKARRQLEKLGVEVLTGTPVSDIDSQGFTLGD-QFVPARTVVWAAGVAASPLARTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 277 LDRAGRVPVQPDLTLPDHPELFVAGDLAALSQADGKPV-PGVAPAAKQMGKYVAEVI--- 332
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
RA E G PF Y G++ATIGR A+V L + L L+G L+W W
Sbjct: 333 ------RARLHGKPEPG-PFKYADYGNLATIGRMAAIVHLGR------LQLSGVLAWWFW 379
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTF 343
+A++ ++ +RNR V +NWA +
Sbjct: 380 LAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|169615176|ref|XP_001801004.1| hypothetical protein SNOG_10743 [Phaeosphaeria nodorum SN15]
gi|160702901|gb|EAT82137.2| hypothetical protein SNOG_10743 [Phaeosphaeria nodorum SN15]
Length = 568
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 194/375 (51%), Gaps = 59/375 (15%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ G I GV+EN FL+EV AQ IR +++ + S+EEK
Sbjct: 210 EVPFDMLVVGKG-------IPGVRENGLFLKEVGDAQRIRARIMDCCETATFKDQSDEEK 262
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F +L
Sbjct: 263 KRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIKDNFHVTLVEALPNVLPMFSKQL 322
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGT----EVPYGLLVWSTGVGPST 190
Y + + + + +VK+V + + + DG ++PYGLLVW+TG
Sbjct: 323 IDYTEKTFDEEAITIRTKTMVKNVAPKYIEAESVGPDGKKQLEKIPYGLLVWATGNALRP 382
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+VK L +P R G ++E+L V ++V+AVGDC+ + + T AQVA +
Sbjct: 383 VVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----AQVAAQ 435
Query: 247 QGKYLFSLLNRIG-----------------KAGGGRANSAKDMELGD------------P 277
+G +L + N + KA G A E+ + P
Sbjct: 436 EGAFLARMFNNMAKTQEIDAQLAELSIAQEKAPGKEARDKIFEEIKNLQKRLRRVKQIGP 495
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG KA+ D+ + S ++ G ++++ WRSAYL+ S RNR V +
Sbjct: 496 FEYSHQGSLAYIGSEKAVADI--SWFSGNIASGGTVTYIFWRSAYLSMCFSTRNRVLVIM 553
Query: 338 NWATTFVFGRDISRI 352
+W VFGRD+SR+
Sbjct: 554 DWVKAKVFGRDVSRV 568
>gi|329766038|ref|ZP_08257599.1| NADH dehydrogenase, FAD-containing subunit [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137493|gb|EGG41768.1| NADH dehydrogenase, FAD-containing subunit [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 400
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A+G++ + +G ++EN+ ++ V A E+R + L + ++ G S E +
Sbjct: 56 LEYDYLVLAVGSDNNFYGNKPIEENSFPIKTVEDAIELRNQTLSMMEIAAQTG-SVELQQ 114
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDRL 139
+ L VVG G GVE GE++ F+ + V+Q Y + ++ I++ LI + NEIL + +L
Sbjct: 115 KFLTFTVVGAGFAGVEIIGEINHFVRKSVKQAYPTINENNINMILISSKNEILPELNYKL 174
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
A + L K GVR++ VK +D+ + L+DG +P L+W+ GV ++++KSL
Sbjct: 175 GESARSYLKKMGVRIISN-VKAIDAGESHVELSDGEIIPCTTLIWTGGVTTNSMIKSLIC 233
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GG++ +D++LR+ +VFA+GDC+ L++ P AQ A R+ +
Sbjct: 234 EHDKGGKVLVDKFLRLKDHPEVFALGDCAAILDTDTGKFYPPTAQHALRESTVV------ 287
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
A + + D L + F Y+ G MATIG + L GLS+ G L+W++
Sbjct: 288 ---AQNIKKSLESDSNLKE-FSYQSKGMMATIGNKAGVASLM------GLSITGVLAWVI 337
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WR+ YL+ + ++ ++ + + WA FG D++ I
Sbjct: 338 WRTYYLSHLPTFESKVKIGIGWAINSFFGTDLTLI 372
>gi|449488409|ref|XP_004158024.1| PREDICTED: NAD(P)H dehydrogenase B3, mitochondrial-like [Cucumis
sativus]
Length = 584
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 134/217 (61%), Gaps = 9/217 (4%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LVIA+GA+ +TF GV EN FL+EV AQ IRR ++ + +P + EE
Sbjct: 160 EFVVDYDYLVIAVGAQVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLPTLDEE 219
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
++ ++LH +VGGGPTGVEF+ EL DF+ D+ + Y +++++ +TL+EA + IL+ FD
Sbjct: 220 DRKKILHFAIVGGGPTGVEFAAELHDFVNEDLVKLYPGLQEFVKITLLEAGDHILNMFDK 279
Query: 138 RLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
R+ +A + + G+ + G + K++ ++++ + + +PYG+ VWSTG+G +
Sbjct: 280 RITTFAEEKFRRDGIDVKTGSMVIKVTDKEISTKEMKNGEISSMPYGMTVWSTGIGTRPI 339
Query: 192 VKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+K R + DEWLRV +V+A+GDC+
Sbjct: 340 IKDFMTQIGQANRRALATDEWLRVEGCDNVYALGDCA 376
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 58/127 (45%), Gaps = 23/127 (18%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-----------GGGRANSAKDMELGDPFVYRHLGS 285
LPA AQVA +QG YL NR+ + G GR F Y+HLG
Sbjct: 470 LPATAQVAAQQGAYLAHCFNRMEECEKYPEGPLRFRGSGRHRFRA-------FRYKHLGQ 522
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
A +G + L + S G S WL W S Y ++ VSWR R V +W F+F
Sbjct: 523 FAPLGGEQTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVTDWTRRFIF 577
Query: 346 GRDISRI 352
GRD SRI
Sbjct: 578 GRDSSRI 584
>gi|449457690|ref|XP_004146581.1| PREDICTED: NAD(P)H dehydrogenase B3, mitochondrial-like [Cucumis
sativus]
Length = 584
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 134/217 (61%), Gaps = 9/217 (4%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LVIA+GA+ +TF GV EN FL+EV AQ IRR ++ + +P + EE
Sbjct: 160 EFVVDYDYLVIAVGAQVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLPTLDEE 219
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
++ ++LH +VGGGPTGVEF+ EL DF+ D+ + Y +++++ +TL+EA + IL+ FD
Sbjct: 220 DRKKILHFAIVGGGPTGVEFAAELHDFVNEDLVKLYPGLQEFVKITLLEAGDHILNMFDK 279
Query: 138 RLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
R+ +A + + G+ + G + K++ ++++ + + +PYG+ VWSTG+G +
Sbjct: 280 RITTFAEEKFRRDGIDVKTGSMVIKVTDKEISTKEMKNGEISSMPYGMTVWSTGIGTRPI 339
Query: 192 VKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+K R + DEWLRV +V+A+GDC+
Sbjct: 340 IKDFMTQIGQANRRALATDEWLRVEGCDNVYALGDCA 376
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 58/127 (45%), Gaps = 23/127 (18%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-----------GGGRANSAKDMELGDPFVYRHLGS 285
LPA AQVA +QG YL NR+ + G GR F Y+HLG
Sbjct: 470 LPATAQVAAQQGAYLAHCFNRMEECEKYPEGPLRFRGSGRHRFRA-------FRYKHLGQ 522
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
A +G + L + S G S WL W S Y ++ VSWR R V +W F+F
Sbjct: 523 FAPLGGEQTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVTDWTRRFIF 577
Query: 346 GRDISRI 352
GRD SRI
Sbjct: 578 GRDSSRI 584
>gi|50305045|ref|XP_452480.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641613|emb|CAH01331.1| KLLA0C06336p [Kluyveromyces lactis]
gi|62868400|emb|CAD43036.2| putative NADH dehydrogenase (ubiquinone) [Kluyveromyces lactis]
Length = 519
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 192/351 (54%), Gaps = 31/351 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TFGI GV++ FL+E+ H+ +IR++ L N+ +++ + E+
Sbjct: 172 EIKYDYLLTAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPER 231
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+++ + + + + L+EA +L+ F+ +L
Sbjct: 232 KRLLTIVVVGGGPTGVETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKL 291
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DG--TE--VPYGLLVWSTGVGPST 190
YA LSK+ + L+ R V V+ LI DG TE VPYG L+W+TG
Sbjct: 292 TSYAQDVLSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARP 351
Query: 191 LV----KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V K + + + +DE L V ++FA+GD + LP AQVA +
Sbjct: 352 IVTDLFKKITEQNASTRALNVDEHLLVKGSNNIFAIGDNAF-------AGLPPTAQVAHQ 404
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYKALVD 297
Q +YL + +++ K G + A E D PF Y HLG++A +G KA+ +
Sbjct: 405 QAEYLAKVFDKMAKIPGFQQELATRKEKIDLLFEENGFKPFKYVHLGALAYLGAEKAIAN 464
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+ K S + G +++ +WR Y+ ++S R+RF V +W F RD
Sbjct: 465 ITYGKRS-FYTGGGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKRD 514
>gi|190894007|ref|YP_001984301.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium etli CIAT 652]
gi|190699668|gb|ACE93751.1| putative FAD-dependent pyridine nucleotide-disulphide
oxidoreductase protein [Rhizobium etli CIAT 652]
Length = 470
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 26/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYDKLVIA G++ + FG ++ A L+ +H A+ IR +LLL ++ SE EK
Sbjct: 113 LSYDKLVIATGSDYNYFGHDEWRQFAPGLKSIHEARHIRHRLLLAFEKAER-AKSEPEKQ 171
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
LL +V+GGGPTGVE +G +S+ + + + +++ Y + V L+EA IL++F + L
Sbjct: 172 ALLTSIVIGGGPTGVEMAGAISELGRFMISRDFRNLQPYNLKVILVEAGPRILAAFPEHL 231
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
YA + L GV + G V D+ + +G VP G ++W GV S L +P
Sbjct: 232 SAYAKSYLENIGVEVRTGRRVMDIREDGAEI-EGEFVPAGSIIWGAGVKASPAHSWLGIP 290
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GGRI +D+ LRV D++A+GD S + GK +LP LAQVA++QG YL L R+
Sbjct: 291 GLAGGRIPVDDHLRVLGFDDIYAIGDTSALTGADGK-LLPGLAQVAKQQGTYLGKSL-RM 348
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
GKA G F +++ G+ A IGR A+ D + +L G +WL+W
Sbjct: 349 GKAVSG-------------FKFKNRGNTAVIGRNAAVFDFGK------WTLKGRAAWLLW 389
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++ ++++ R VA+ W ++ + +RI
Sbjct: 390 ALVHVYLLINFEKRLLVAIQWVGRYLTRQRGARI 423
>gi|363754103|ref|XP_003647267.1| hypothetical protein Ecym_6047 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890904|gb|AET40450.1| hypothetical protein Ecym_6047 [Eremothecium cymbalariae
DBVPG#7215]
Length = 540
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 194/355 (54%), Gaps = 33/355 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ +GA+ +TFG GV E+A+FL+E+ AQ+IR K++ N+ + ++ E+
Sbjct: 193 ELKYDYLVVGVGAQPTTFGTPGVYEHASFLKEIPDAQDIRVKIMNNIEKAATLSPNDAER 252
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVEF+ EL D++ +D+ + + I V L E IL+ FD L
Sbjct: 253 KRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWMPELSKEISVVLCEGLPNILNMFDKSL 312
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGP----STL 191
YA + + L + +VK+V++ + G E+PYG+LVW+TG P +L
Sbjct: 313 WQYAQDLFKEERIDLKLNTMVKNVNATHITTKCGDQIEELPYGVLVWATGNAPREVSESL 372
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+ L+ S G + D+ + + ++A+GDC+ Y + P AQVA +QG+YL
Sbjct: 373 MNKLEEQNSRRGLLINDKLQLLGAKDSIYAIGDCTFY-----PGLFPT-AQVAHQQGEYL 426
Query: 252 FSLLNRIGKAG--GGRANSAKDME--------------LGDPFVYRHLGSMATIGRYKAL 295
+ + K +A + K +E L +PF Y H G++A IG KA+
Sbjct: 427 ARVFKKQYKIDQIAWQAENCKSVEEKAKWCSKKDKLKTLVEPFKYNHQGALAYIGSDKAI 486
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
DL ESK LAG ++L W+S+YL +S+RNR VA++W GRD S
Sbjct: 487 ADLAIG-ESK-YRLAGSWTFLFWKSSYLVMCLSFRNRILVALDWLKVSFLGRDSS 539
>gi|344209046|ref|YP_004794187.1| NADH dehydrogenase (ubiquinone) [Stenotrophomonas maltophilia JV3]
gi|343780408|gb|AEM52961.1| NADH dehydrogenase (ubiquinone) [Stenotrophomonas maltophilia JV3]
Length = 426
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 173/327 (52%), Gaps = 26/327 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A +RRKLLL ++ +K+
Sbjct: 99 LDYDSLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEP-DPAKKA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF + L
Sbjct: 158 AWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G V D+DSQ L + VP +VW+ GV S L ++LD+P
Sbjct: 218 SLKARRQLEKLGVEVLTGTPVSDIDSQGFKLGE-QFVPARTVVWAAGVAASPLARTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN-R 257
GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++ R
Sbjct: 277 LDRAGRVQVQPDLTLPDHPELFVAGDLAALNQANGKPV-PGVAPAAKQMGKYVAEVIRAR 335
Query: 258 I-GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ GKA G PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 336 LHGKAAPG------------PFKYADYGNLATIGRMAAIVHLGR------LQLSGILAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTF 343
W +A++ ++ +RNR V +NWA +
Sbjct: 378 FWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|365989774|ref|XP_003671717.1| hypothetical protein NDAI_0H03010 [Naumovozyma dairenensis CBS 421]
gi|343770490|emb|CCD26474.1| hypothetical protein NDAI_0H03010 [Naumovozyma dairenensis CBS 421]
Length = 576
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 200/367 (54%), Gaps = 46/367 (12%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K + +D LV+A+G++ +TFG+ GV E+ +FL+E+ A++IR K+L N+ +++ +
Sbjct: 220 KLDLKFDYLVVAVGSQPTTFGVPGVLEHGSFLKEISDARDIRLKILNNIEVANNLPKDDP 279
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
+++LL VVVGGGPTGVEF+ EL D++ D+ + I +TLIE A IL+SF+
Sbjct: 280 LRAKLLKFVVVGGGPTGVEFAAELKDYVSEDLAAAMPEISKEIKLTLIEGAPNILNSFNK 339
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLV 192
L YA +KS + L ++ VK+V ++ +G E+PYG+LVW+TG P +
Sbjct: 340 SLVEYAQDVFAKSRIELKLKTQVKEVTKDYILAKNGGGEIEEIPYGVLVWATGNAPRDVT 399
Query: 193 KSL--DLPKSPGGRIG--IDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQVA 244
K L LP+ R G I++ L++ + ++A+GDC T P L AQVA
Sbjct: 400 KKLMTSLPEQQNSRRGLLINDKLQLLGAEGSIYAIGDC---------TFHPGLFPTAQVA 450
Query: 245 ERQGKYL---FSLLNRIG----KAGGGRA--------------NSAKDMELGDPFVYRHL 283
++ YL F+ LN+I K G + N K + F Y HL
Sbjct: 451 HQEAVYLADVFTKLNKIDQLNWKVQGEKQHEMTSKNDIKPLTKNVQKLPSTIEDFKYNHL 510
Query: 284 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G++A IG KA+ DL SK S F ++L ++SAYL +S+RNR VA++W
Sbjct: 511 GALAYIGSEKAIADLSLG-SSKYYSTGSF-TFLFYKSAYLAMCLSFRNRILVALDWLKVS 568
Query: 344 VFGRDIS 350
+ GRD S
Sbjct: 569 LLGRDSS 575
>gi|396498745|ref|XP_003845305.1| hypothetical protein LEMA_P006130.1 [Leptosphaeria maculans JN3]
gi|312221886|emb|CBY01826.1| hypothetical protein LEMA_P006130.1 [Leptosphaeria maculans JN3]
Length = 554
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 189/377 (50%), Gaps = 87/377 (23%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F ++YDKL++ +G + TFG GV+E+A FL++V A++IR +LL + +P +EE
Sbjct: 192 QFDLTYDKLIVTVGCYSQTFGTPGVREHAFFLKDVGDARKIRNRLLACFEGAALPTTTEE 251
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
+ +LL+ VVGGGPTG+EFS EL D I D+ + Y + Y +T+ + A+++L FD+
Sbjct: 252 MRRQLLNFAVVGGGPTGIEFSAELHDLIHEDLAKIYPELIPYHKITVYDVADKVLPMFDE 311
Query: 138 RLRHYATTQLSKSGVRLV---------------RGIVKDVDSQKLI---LNDGTEVPYGL 179
+L YA+ + ++SG+ + R I KDV+ +L L + ++ G+
Sbjct: 312 KLAKYASQRFARSGIDIKTSHHVESLRLGAPAERTISKDVNDYRLFTLKLKEEGDIGVGM 371
Query: 180 LVWSTGVGPSTLV-KSLD---------------------------LPKSP-GGRIGIDEW 210
VWSTG+ + V +SLD + K P G I D
Sbjct: 372 CVWSTGLMQNPFVAQSLDDVRQAPDNLQLLDSNQALQHLKGVKWKVKKHPRSGSIITDTR 431
Query: 211 LRV---PSV--------------QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
LRV PS DVFA+GDC G ++ T PA AQVA ++ +L
Sbjct: 432 LRVKLEPSTTTAGPQSTGPEAVNPDVFALGDC-GVIQDTS---YPATAQVASQKALWLTK 487
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
LN+ G +A F YR+LG++A IG + AL + G L G+L
Sbjct: 488 RLNK-----GDVDKTA--------FTYRNLGTLAYIGNWDALF-----QGGGGGRLQGYL 529
Query: 314 SWLVWRSAYLTRVVSWR 330
+W++WR AYLT+ R
Sbjct: 530 AWIIWRGAYLTKTFRRR 546
>gi|322700630|gb|EFY92384.1| hypothetical protein MAC_01655 [Metarhizium acridum CQMa 102]
Length = 567
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 187/351 (53%), Gaps = 54/351 (15%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVI +GAE +TFGI GV+EN+ FL+E+ AQ+IR+K++ + + G + +E
Sbjct: 221 EIPYDMLVIGVGAENATFGIPGVRENSCFLKEIGDAQQIRKKIMDCVETAAFKGQTSDEI 280
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L SF +L
Sbjct: 281 DRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISPRFKVTLIEALPNVLPSFSKQL 340
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y L + + +V+ + ++ DG + +PYGLLVW+TG
Sbjct: 341 IDYTENTLREEKIDIKTKTMVKRVTNTTVEAEVSRPDGGKERVVIPYGLLVWATGNAVRP 400
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
++K L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 401 IIKDLITKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 451
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDME--------LGD--P 277
++G +L L N + K G A +A+++E + D P
Sbjct: 452 SQEGNFLGRLFNNMAKTEKHESRIQELSSKMNLQAGNSAEAAQEIESLEKQLRRIKDIKP 511
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 328
F Y H GS+A IG KA+ D+ + + L+ G +++L WRSAYL+ S
Sbjct: 512 FRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGRMTYLFWRSAYLSMCFS 560
>gi|385274843|dbj|BAM13876.1| type II NAD(P)H dehydrogenase [Arum maculatum]
Length = 581
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 143/238 (60%), Gaps = 12/238 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LV+A+GA A+TF GV EN FL+EV AQ IRR ++ + +P +S+E
Sbjct: 158 EFVVDYDYLVVAIGARANTFNTPGVTENCHFLKEVEDAQRIRRSVIDCFERASLPTLSDE 217
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDD 137
E+ + LH V+VGGGPTGVEF+ EL DF+ D+ + Y V++ + +++IEA E IL+ FD
Sbjct: 218 ERKKNLHFVIVGGGPTGVEFAAELHDFVNEDLSKLYPKVQELVKISVIEAGEHILTMFDK 277
Query: 138 RLRHYATTQLSKSGVRLVRG--IVKDVD-SQKLILNDGTE--VPYGLLVWSTGVGPSTLV 192
R+ +A + + G+ + G +VK D S ++ + E VPYG+ VWSTG+G ++
Sbjct: 278 RITEFAEGKFQREGIDVKTGYKVVKVSDKSISMVSKEAGEIDVPYGMAVWSTGIGTRPVI 337
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
LD K G + DEWLRV V+A+GDC+ + + ++ +VA++
Sbjct: 338 --LDFMKQIGQGDRRVLATDEWLRVRGCDGVYALGDCATITQRRVMDDISSIFRVADK 393
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL N + + E G PF YRHLG A +G
Sbjct: 467 LPATAQVASQQGAYLARCFNLLQNIDVNPEGPIRIRESGRHRFRPFRYRHLGQFAPLGGE 526
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G+ S +W S Y ++ VSWR R V NW F+FGRD S +
Sbjct: 527 QTAAQLPGDWIS-----IGYGSQWLWYSVYASKQVSWRTRVAVVSNWTRRFIFGRDSSSL 581
>gi|452840973|gb|EME42910.1| hypothetical protein DOTSEDRAFT_72370 [Dothistroma septosporum
NZE10]
Length = 426
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 180/344 (52%), Gaps = 39/344 (11%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
FK+ YDKLV+A G + TFG G E+A FLR AQ+I++++L L + PG++ +
Sbjct: 108 FKLKYDKLVLAPGCDVQTFGTPGALEHANFLRTTADAQKIQQRILEMLDAASTPGLTNAQ 167
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ +L ++VGGG G+E + EL D D+R Y H++ + + + + A +L +FD R
Sbjct: 168 QRDILRILIVGGGAIGIEATAELFDLWQHDMRHIYPHLEGKLSIEVHDVAPGLLGNFDKR 227
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA +L GV + ++ V++ + + E YG+L+W+TG G ++LV LD+
Sbjct: 228 LGEYAAQKLEGRGVEIRTSSHIEKVEAGAIWTKERGEERYGMLIWATGNGVNSLVDKLDV 287
Query: 198 PKSPG-GRIGIDEWLRV-----PSVQDVFAVGDCS---GYLESTGKTVLPALAQVAERQG 248
K+ RI D LRV V+DVFA+GD + GY LP LA+VA ++
Sbjct: 288 KKTEKLPRILTDRRLRVFGKDDQLVEDVFALGDSADIDGY-------SLPTLAEVAVQKA 340
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+YL + LN A D E + F Y+ ++A +G++ ++ RQ
Sbjct: 341 EYLANELN------------ATD-EPTNAFEYKSRPNIAYLGQHDGVIGGRQ-------E 380
Query: 309 LAGFLSWLVWRSAYLTR-VVSWRNRFYVAVNWATTFVFGRDISR 351
G +W+ WRS + SWR + ++W V GRDI+R
Sbjct: 381 WTGQSAWIAWRSGSIYHWPRSWRRTLMIGISWLFNRVGGRDIAR 424
>gi|242096782|ref|XP_002438881.1| hypothetical protein SORBIDRAFT_10g027690 [Sorghum bicolor]
gi|241917104|gb|EER90248.1| hypothetical protein SORBIDRAFT_10g027690 [Sorghum bicolor]
Length = 584
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 132/218 (60%), Gaps = 13/218 (5%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LV+ALGA STF GV E+ FL+EV AQ+IRR ++ + +P IS EE
Sbjct: 160 FMLDYDYLVVALGATVSTFNTPGVLEHCCFLKEVEDAQKIRRCVIDCFEKASLPNISAEE 219
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDR 138
K ++LH VV+GGGPTGVEF+ E+ DF++ D+ + Y ++D++ +T+I++ E IL+ FD+R
Sbjct: 220 KRKILHFVVIGGGPTGVEFAAEMHDFLVEDLVKLYPAIQDFVKITIIQSGEHILNMFDER 279
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT-----EVPYGLLVWSTGVGPSTLV 192
+ +A + + G+ + G V V + + + VPYG+ VWS G+G ++
Sbjct: 280 IAAFAEQKFQRDGIEVCTGFRVIKVSDDSITMKSKSAGKEVSVPYGMAVWSAGIGTRPVI 339
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+D + G + +EWLRV + V+A+GDC+
Sbjct: 340 --MDFMQQIGQTNRRALATNEWLRVRECEGVYAIGDCA 375
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 238 PALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGRY 292
PA AQVA +QG+YL N++ K G R PF Y+H G A +G
Sbjct: 470 PATAQVAAQQGQYLAECFNKMEKCKEDPEGPLRMTGGSGRHFFRPFRYKHFGQFAPLGGE 529
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A +L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 530 QAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI 584
>gi|194367376|ref|YP_002029986.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Stenotrophomonas maltophilia R551-3]
gi|194350180|gb|ACF53303.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Stenotrophomonas maltophilia R551-3]
Length = 426
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 170/325 (52%), Gaps = 22/325 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A +RRKLLL ++ +K+
Sbjct: 99 LDYDTLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEP-DPAKKA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF + L
Sbjct: 158 AWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++LD+P
Sbjct: 218 SLKARRQLEKLGVEVLTGTPVSDIDSQGFKLGD-QFVPARTVVWAAGVAASPLARTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 277 LDRAGRVQVQPDLTLPDHPELFVAGDLAALNQANGKPV-PGVAPAAKQMGKYVAEVI--- 332
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
RA G PF Y G++ATIGR A+V L + L L+G L+W W
Sbjct: 333 ------RARLHNKPAPG-PFKYADFGNLATIGRMAAIVHLGR------LQLSGVLAWWFW 379
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTF 343
+A++ ++ +RNR V +NWA +
Sbjct: 380 LAAHVFFLIGFRNRVVVLLNWAVAY 404
>gi|357123480|ref|XP_003563438.1| PREDICTED: external NADH-ubiquinone oxidoreductase 1,
mitochondrial-like [Brachypodium distachyon]
Length = 589
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 135/216 (62%), Gaps = 9/216 (4%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LV+ALGA +TF GV E+ FL+EV AQ+IRR ++ + +P ISEEE
Sbjct: 164 FLVDYDYLVVALGATVNTFNTPGVMEHCYFLKEVEDAQKIRRSVVDCFEKASLPNISEEE 223
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDR 138
K ++LH V++GGGPTGVEF+ EL DF++ D+ + Y +++++ +T+I++ E IL+ FD R
Sbjct: 224 KRKILHFVIIGGGPTGVEFAAELHDFLVEDLVKIYPAIQEFVKITIIQSGEHILNMFDQR 283
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND---GTE--VPYGLLVWSTGVG--PST 190
+ +A T+ + G+ + G V +V + + G+E VPYG+ VWS G+G P T
Sbjct: 284 IAEFAETKFLRDGIEVCTGFRVVNVSDDLITMKSKSAGSEISVPYGMAVWSAGIGTRPVT 343
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+ + ++ + +EWLRV V+A+GDC+
Sbjct: 344 VDFMHQIGQAKRRSLETNEWLRVRECDSVYAIGDCA 379
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 227 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA-----GGGR-ANSAKDMELGDPFVY 280
G+++S K+V PA AQVA +QG YL N++ G R SA PF Y
Sbjct: 464 GHVDSQVKSV-PATAQVAAQQGYYLADCFNKMDYCKDHPEGPLRMTGSAAGHHNFRPFRY 522
Query: 281 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 340
+HLG A +G +A +L + S G S WL W S Y ++ VSWR R V +W
Sbjct: 523 KHLGQFAPLGGEQAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVVSDWT 577
Query: 341 TTFVFGRDISRI 352
F+FGRD SRI
Sbjct: 578 RRFIFGRDSSRI 589
>gi|255716452|ref|XP_002554507.1| KLTH0F06974p [Lachancea thermotolerans]
gi|238935890|emb|CAR24070.1| KLTH0F06974p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 192/351 (54%), Gaps = 31/351 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV A+GAE +TFGI GV+++ FL+E+ H+ EIR++ L N+ +++ + E+
Sbjct: 169 EIKYDYLVSAVGAEPNTFGIPGVEKHGNFLKEIPHSLEIRKRFLSNIEKANLLPKGDPER 228
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVE +GEL D+I +D+++ V + + + L+EA +L+ F+ +L
Sbjct: 229 RRLLTIVVVGGGPTGVETAGELQDYIDQDLKRFMPSVAEEVQIHLVEALPVVLNMFERKL 288
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGVGPST 190
YA L K+ +++ +R V V+ L+ E +PYG L+W+TG +
Sbjct: 289 TSYAQDVLQKTRIKVHLRTAVARVEEDHLVAKTKAEDGATTEQTIPYGTLIWATGNKALS 348
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V L +P + G +++ L V ++FAVGD + LP AQVA +
Sbjct: 349 IVTDLFKKIPAQNDSKRGLAVNQNLLVKGSNNIFAVGD-------NAFSGLPPTAQVAHQ 401
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYKALVD 297
Q +YL +L+++ K+ A A+ E D PF Y H G++A +G KA+ +
Sbjct: 402 QAEYLAKVLSKMAKSPNFHAELAQRKEKVDLFFEQKGIKPFNYTHYGALAYLGAEKAIAN 461
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+ K S + G L++ VWR Y ++S R+RF V +W F RD
Sbjct: 462 ITYGKRS-FYTGGGVLTFYVWRVTYAMMILSARSRFKVIADWLKLAFFKRD 511
>gi|410697032|gb|AFV76100.1| NADH dehydrogenase, FAD-containing subunit [Thermus oshimai JL-2]
Length = 402
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 168/326 (51%), Gaps = 37/326 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ Y L++A G+ G+ GV +A FL+ + AQ IR++LLL L G + E+
Sbjct: 93 LPYTHLILATGSRPHDLGVPGVGRHAFFLKGLEDAQRIRQRLLLALE-----GAARGERP 147
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLR 140
L +VVGGGPTGVE +G L++F+ +R+ + V V L+EA E +L SF L
Sbjct: 148 --LRLLVVGGGPTGVELAGALAEFLRYALRRDFPEVGG-AEVLLLEAGERLLPSFRPALS 204
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L GVR+V G V V+ L +G +P L++W+ GV + L LP
Sbjct: 205 AYAKRALEGMGVRVVLGAQVVGVEEGGARLREGAFLPADLVLWAVGVRGNPLP---GLPT 261
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
P GR+ D +LR+P +V+AVGD +G LP LA VA +QG+ L R
Sbjct: 262 DPRGRVPTDPFLRLPGHPEVYAVGDVNG-------LGLPGLAPVALQQGRLAAENLLR-- 312
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
A + PF YR G +A IGR KA+ ++ GL+ GF +W +W
Sbjct: 313 ---------ALRGQEPIPFRYRDRGQLAVIGRNKAVAEI------GGLAFTGFPAWALWA 357
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVF 345
++ ++ +RNR V +NW T++F
Sbjct: 358 FVHIRELIGFRNRLLVLLNWGYTYLF 383
>gi|385274837|dbj|BAM13873.1| type II NAD(P)H dehydrogenase [Symplocarpus renifolius]
Length = 580
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 147/256 (57%), Gaps = 15/256 (5%)
Query: 2 KVHCETVTDELRTLE-PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KVHC + LE +F + YD LV+ALGA+A+TF GV E+ FL+EV A IR
Sbjct: 141 KVHCRSNIGT--NLEGNGEFVVEYDYLVVALGAKANTFNTPGVVEHCHFLKEVEDALRIR 198
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P +++EE+ LH ++VGGGPTGVEF+ EL DF+ D+ + Y V+D
Sbjct: 199 RSVMDCFERASLPNLTDEERKTNLHFIIVGGGPTGVEFAAELHDFVSEDIAKLYPRVRDL 258
Query: 121 IHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---E 174
+ +++IEA E IL+ FD R+ +A + + G+ + G +VK D ++ T
Sbjct: 259 VKISVIEAGEHILTMFDKRITAFAEEKFKREGIDVKTGYRVVKVSDKDIIMTGKATGEIA 318
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLE 230
+PYG+ VWSTG+G ++ LD K G + DEWLRV V+A+GDC+ +
Sbjct: 319 IPYGMAVWSTGIGTRPVI--LDFMKQIGQADRRVLATDEWLRVRGCDGVYALGDCATISQ 376
Query: 231 STGKTVLPALAQVAER 246
+ A+ +VA++
Sbjct: 377 RKVMDDISAIFKVADK 392
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL N + + E G PF Y+HLG A +G
Sbjct: 466 LPATAQVAAQQGYYLARCFNVMKNVEENPEGPLRMRESGRHRFRPFRYKHLGQFAPLGGE 525
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G+ S +W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 526 QTAAQLPGDWIS-----IGYGSQWLWYSVYASKQVSWRTRLSVVSDWTRRFIFGRDSSCI 580
>gi|386875496|ref|ZP_10117662.1| pyridine nucleotide-disulfide oxidoreductase [Candidatus
Nitrosopumilus salaria BD31]
gi|386806697|gb|EIJ66150.1| pyridine nucleotide-disulfide oxidoreductase [Candidatus
Nitrosopumilus salaria BD31]
Length = 446
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A+G+ + FG ++EN+ ++ V A E+R ++LL + ++ G S +
Sbjct: 103 LEYDYLVLAVGSINNFFGNKAIEENSFTIKTVEDAIELRNQILLMMEIAAQTG-SMGLQQ 161
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDDRL 139
+ L VVG G GVE GE++ F+ + V+Q Y + D I++ LI + NEIL + +L
Sbjct: 162 KFLTFTVVGAGFAGVETIGEINHFVRKSVKQAYPSIVDTNINMILISSRNEILPELNKKL 221
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
A L K GVR++ VK +++ + + L+DG +P L+W+ GV ++++KS++
Sbjct: 222 GESARAYLEKVGVRIITN-VKAINAGESYVELSDGEIIPCTTLIWTGGVTTNSMIKSMNC 280
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
S G+I +D++L++ +VFA+GDC+ + P AQ A R+ K +
Sbjct: 281 EHSKDGKILVDKYLKLKEHSEVFALGDCAAIPDVDTGKFYPPTAQHALRESKI---VAEN 337
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
I K G + S K+ F Y G MATIG + L G S++G L+W++
Sbjct: 338 IKKTLDGDS-SLKE------FSYHSKGMMATIGDKAGVASLM------GHSISGVLAWVI 384
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WR+ YL + + + + ++WA FG D++RI
Sbjct: 385 WRTYYLLHLPTLETKIRIGISWAINLFFGTDLTRI 419
>gi|384106283|ref|ZP_10007190.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|383833619|gb|EID73069.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
Length = 460
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 171/332 (51%), Gaps = 31/332 (9%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA S FG E+A ++ + A E+R ++L +++ EE++RL
Sbjct: 108 YDSLIVSAGARQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFERAELS-TDPEERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK--DYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + Y ++ D V L A+ +L F DRL
Sbjct: 167 LTFVVVGAGPTGVEMAGQIAELAHRTLLGAYRNIDTCDAQIVLLDAASAVLPPFGDRLGS 226
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVKSLD 196
A +L K GV + G V DVD+ + + DG + VWS GV S L + L
Sbjct: 227 AAAKRLEKIGVEVRLGAAVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASPLARQLA 286
Query: 197 LPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
GRI + E L VP ++VF +GD + LP +AQVA + G+Y
Sbjct: 287 EQSGAELDRAGRIAVREDLTVPGHREVFVIGDM------MARDRLPGVAQVAIQGGRYA- 339
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+I GGRA S + PF YR GSMATI R+ A+V + G+ LAGF
Sbjct: 340 --ARQIAADAGGRATSPDRV----PFRYRDKGSMATISRFNAVVKV------GGIELAGF 387
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+W++W + ++ VV +R+R ++W TF+
Sbjct: 388 LAWILWLAVHVVYVVGFRSRLSTLMSWTWTFL 419
>gi|365986787|ref|XP_003670225.1| hypothetical protein NDAI_0E01660 [Naumovozyma dairenensis CBS 421]
gi|343768995|emb|CCD24982.1| hypothetical protein NDAI_0E01660 [Naumovozyma dairenensis CBS 421]
Length = 564
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 196/360 (54%), Gaps = 42/360 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+++GA+++TF I GV E+A FL+E+ +++IR K++ N+ ++ + E+
Sbjct: 215 LKYDYLVVSVGAKSTTFNIPGVIEHANFLKEIEDSEKIRLKIINNIEMASFLLPDDPERK 274
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
+LL+ VVVGGGPTGVEF+ EL D++ +D+++ + + VTL+EA IL+ FD L
Sbjct: 275 KLLNFVVVGGGPTGVEFAAELQDYVRQDLKKWLPDISKEVKVTLVEALPNILNMFDKSLI 334
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKL--ILNDGTE-VPYGLLVWSTGVGPSTLVKSL- 195
+ L K + L ++ +VK VD + ++ND E +PYG+L+W+TG PS L K L
Sbjct: 335 EHTEKFLKKEKINLKLKTMVKSVDDDNINAMVNDKVEKIPYGVLIWATGNAPSDLCKGLM 394
Query: 196 ---DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL---AQVAERQGK 249
+ SP G + ++ + +FA+GDC T P L AQVA ++G
Sbjct: 395 EQVEEQTSPRGLLINNQLQLLGFEDSIFALGDC---------TFHPGLFPTAQVAHQEGD 445
Query: 250 YL---FSLLNRIGKAG------GGRANSAKDMELGDP----------FVYRHLGSMATIG 290
YL F + +I + N +K + L D F Y H G+++ IG
Sbjct: 446 YLADRFKTMYKIDQLKWKINHLDDVKNHSKKIRLSDKLTKLESKLQDFEYLHRGTLSYIG 505
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
KA+V+L+ + +S G L+ W+SAYL S RNR VA +W + FGRD S
Sbjct: 506 NEKAIVELKIGNSNYKIS--GPLAIWFWKSAYLNMCFSVRNRASVAFDWFKVYFFGRDSS 563
>gi|424854556|ref|ZP_18278914.1| NADH dehydrogenase [Rhodococcus opacus PD630]
gi|356664603|gb|EHI44696.1| NADH dehydrogenase [Rhodococcus opacus PD630]
Length = 471
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 172/332 (51%), Gaps = 31/332 (9%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA S FG E+A ++ + A E+R ++L +++ EE++RL
Sbjct: 119 YDSLIVSAGARQSYFGNDHFAEHAPGMKSIDDALELRGRILGAFERAELS-TDPEERARL 177
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + Y ++ +D V L A+ +L F DRL
Sbjct: 178 LTFVVVGAGPTGVETAGQIAELAHRTLVGAYRNIDTRDARIVLLDAASAVLPPFGDRLGS 237
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVKSLD 196
A +L K GV + G V DVD+ + + DG + VWS GV S L + L
Sbjct: 238 AAAERLEKIGVEVRLGAAVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASPLARQLA 297
Query: 197 LPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
GRI + E L VP ++VF +GD + LP +AQVA + G+Y
Sbjct: 298 EQSGAELDRAGRIAVREDLTVPGHREVFVIGDM------MARDRLPGVAQVAIQGGRYA- 350
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+I GGRA S + PF YR GSMATI R+ A+V + G+ LAGF
Sbjct: 351 --ARQISADAGGRATSPDRV----PFRYRDKGSMATISRFNAVVKV------GGIELAGF 398
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+W++W + ++ VV +R+R ++W TF+
Sbjct: 399 LAWILWLAVHVVYVVGFRSRLSTLMSWTWTFL 430
>gi|385274835|dbj|BAM13872.1| type II NAD(P)H dehydrogenase [Symplocarpus renifolius]
Length = 580
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 147/256 (57%), Gaps = 15/256 (5%)
Query: 2 KVHCETVTDELRTLE-PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KVHC + LE +F + YD LV+ LGA+A+TF GV E+ FL+EV A IR
Sbjct: 141 KVHCRSNIGT--NLEGNGEFVVEYDYLVVTLGAKANTFNTPGVVEHCHFLKEVEDALRIR 198
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P +++EE+ LH ++VGGGPTGVEF+ EL DF+ D+ + Y V+D
Sbjct: 199 RSVMDCFERASLPNLTDEERKTNLHFIIVGGGPTGVEFAAELHDFVSEDIAKLYPRVRDL 258
Query: 121 IHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG---TE 174
+ +++IEA E IL+ FD R+ +A + + G+ + G +VK D + ++ T
Sbjct: 259 VKISVIEAGEHILTMFDKRITAFAEEKFKRDGIDVKTGYRVVKVSDKEIIMTGKATGETA 318
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGG----RIGIDEWLRVPSVQDVFAVGDCSGYLE 230
VPYG+ VWSTG+G ++ LD K G + DEWLRV V+A+GDC+ +
Sbjct: 319 VPYGMAVWSTGIGTRPVI--LDFMKQIGQVDRRVLATDEWLRVRGCDGVYALGDCATISQ 376
Query: 231 STGKTVLPALAQVAER 246
+ A+ +VA++
Sbjct: 377 RKVMDDISAIFKVADK 392
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL N + + E G PF Y+HLG A +G
Sbjct: 466 LPATAQVAAQQGYYLARCFNVMKNVEENPEGPLRMRESGRHRFRPFRYKHLGQFAPLGGE 525
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G+ S +W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 526 QTAAQLPGDWIS-----IGYGSQWLWYSVYASKQVSWRTRLSVVSDWTRRFIFGRDSSCI 580
>gi|412994023|emb|CCO14534.1| predicted protein [Bathycoccus prasinos]
Length = 582
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 35/351 (9%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F I+YD LV+A+GA +TFG+ GV+++ F +EV HA + R ++ + +P +S +
Sbjct: 248 FDINYDYLVVAVGAIPNTFGVPGVEQHCLFFKEVAHAAQFRSQVNARFERAALPSMSVGQ 307
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIE-ANEILSSFDD 137
LL VV+G GPTGVE + EL D + DV + + + ++ + +++ + +LS++D
Sbjct: 308 IEDLLRFVVIGAGPTGVELAAELYDLVYNDVAKTFPKRLLKHVSINIVDLQDRLLSTYDR 367
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT-----EVPYGLLVWSTGVGPSTL 191
+++YAT K+ + + VK+V L + D E+P+G+ VW +G+ + +
Sbjct: 368 DIQNYATDFFQKANINCILNTQVKEVKQCVLTVADKNTGEEKELPFGMAVWCSGIKMNPV 427
Query: 192 VKSL--DLPK--SPGGR-IGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+ + LP+ P R + D+ +RV S ++ +GDC LE PA AQVA+
Sbjct: 428 CEKVMDSLPEGSQPSRRALLADKAMRVKGSDGSIYGIGDCVT-LEPKA---YPATAQVAK 483
Query: 246 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNK 302
++G YL N+ + G L DP FVY H GS+A IG+ A+ D+
Sbjct: 484 QEGYYLAERFNKAAETGNYAV-------LDDPNAEFVYTHRGSLAYIGKDAAVADI---- 532
Query: 303 ESKGLS-LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G++ L G ++ L W+S VS N F V + T +FGRDISR+
Sbjct: 533 --PGVTILKGIMAGLFWKSFETVSQVSVGNSFKVGFDMLRTRIFGRDISRL 581
>gi|409045629|gb|EKM55109.1| hypothetical protein PHACADRAFT_183946 [Phanerochaete carnosa
HHB-10118-sp]
Length = 679
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 198/426 (46%), Gaps = 102/426 (23%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YDKLVIA G+ ++T GI G+ EN L+ + AQ IR++++ N ++ +P SEEE+
Sbjct: 261 VPYDKLVIAAGSTSTTHGIQGL-ENCFQLKTIGDAQRIRQRIIDNFEVAALPTTSEEERK 319
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDRL 139
RLL VV GGGPTG+E + E+ D D+ Y + ++Y+ + +I++ + IL+++ + +
Sbjct: 320 RLLSFVVCGGGPTGIETAAEIYDLCQEDIINYYPKICREYVSIHVIQSRSHILNTYSEAI 379
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPST 190
YA + ++ GV LV V V K++ DG E+P ++WSTG+ S
Sbjct: 380 SRYAEDKFNRDGVNLVTNARVGSVHPDKVVYTIKGKDGKTEEHEIPANFVLWSTGIAMSP 439
Query: 191 LVKSLD--LP-------------------------------------------------K 199
V + LP K
Sbjct: 440 FVARISSLLPNQVHKKAIEVDAHLRVKGAPLGEVYAIGDASTIETSIVAHLLELVDASDK 499
Query: 200 SPGGRIGIDEWL--------RVP-------SVQDVFAVGDCSG-----------YLESTG 233
+ G+I +EW R+P +V+++F + D L+ G
Sbjct: 500 NKDGKIDFEEWQIMVDQIKKRIPMSEEHLSTVRELFDLYDSDADSSLNLNELAVLLQEIG 559
Query: 234 K--TVLPALAQVAERQGKYLFSLLNRIGK-----AGGGRANSAKDMELGDPFVYRHLGSM 286
T LPA AQVA +QGKYL L+R+ + A + D + PF YRHLGS+
Sbjct: 560 NKITALPATAQVASQQGKYLGRKLSRVARQRPVLAANDLTTNEGDEFVSGPFRYRHLGSL 619
Query: 287 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 346
A IG A+ DL K + G ++ WRS Y + VS+R R + ++W ++G
Sbjct: 620 AYIGN-AAVFDL-----GKYSFMGGLVAMYAWRSVYWSEQVSYRTRALLMIDWIVRGIWG 673
Query: 347 RDISRI 352
RD+SR+
Sbjct: 674 RDLSRL 679
>gi|302308866|ref|NP_985994.2| AFR447Cp [Ashbya gossypii ATCC 10895]
gi|299790833|gb|AAS53818.2| AFR447Cp [Ashbya gossypii ATCC 10895]
gi|374109223|gb|AEY98129.1| FAFR447Cp [Ashbya gossypii FDAG1]
Length = 519
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 31/351 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV A+GAE +TFGI GV+E+ FL+E+ H+ EIR++ L N+ +++ + E+
Sbjct: 172 ELKYDYLVSAVGAEPNTFGIPGVEEHGNFLKEIPHSFEIRKRFLSNVEKANLLPKGDPER 231
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVE +GE D++ +D+++ + + + + L+EA +L+ F+ +L
Sbjct: 232 KRLLTIVVVGGGPTGVETAGEFQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKL 291
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPST 190
YA L K+ ++L+ R V V+ LI DGT +PYG L+W+TG
Sbjct: 292 TSYAQDVLQKTNIKLMLRTAVGKVEKDHLIAKTKKEDGTVVEQTIPYGTLIWATGNKARP 351
Query: 191 LV----KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V K + S + +D ++ V +VFAVGD + L AQVA +
Sbjct: 352 IVCDLFKKIPEQNSSTRGLAVDNYMLVKGTNNVFAVGDNAF-------AGLAPTAQVAHQ 404
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYKALVD 297
+ +YL + +++ K + E D PF Y HLG++A +G +A+ D
Sbjct: 405 EAEYLAKVFDKMAKIPDFHEQLTQRKEKVDLLFEEHGFKPFKYVHLGALAYLGAERAIAD 464
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+ K+S + G +++ +WR YL+ ++S R+RF V +W F RD
Sbjct: 465 ITYGKKS-FYTGGGLITFYIWRVTYLSMLLSARSRFKVIADWLKLTFFKRD 514
>gi|254521239|ref|ZP_05133294.1| NADH dehydrogenase protein [Stenotrophomonas sp. SKA14]
gi|219718830|gb|EED37355.1| NADH dehydrogenase protein [Stenotrophomonas sp. SKA14]
Length = 426
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 172/327 (52%), Gaps = 26/327 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A +RRKLLL ++ +K+
Sbjct: 99 LDYDSLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEP-DPAKKA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L +VGGGPTGVE +G L++ +R + H+ V L+EA +LSSF + L
Sbjct: 158 AWLSFAIVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G V D+DSQ L + VP +VW+ GV S L ++LD+P
Sbjct: 218 SLKARRQLEKLGVEVLTGTPVSDIDSQGFKLGE-QFVPARTVVWAAGVAASPLARTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN-R 257
GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++ R
Sbjct: 277 LDRAGRVQVQPDLTLPDHPELFVAGDLAALNQANGKPV-PGVAPAAKQMGKYVAEVIRAR 335
Query: 258 I-GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ GK G PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 336 LHGKPAPG------------PFKYADYGNLATIGRMAAIVHLGR------LQLSGILAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTF 343
W +A++ ++ +RNR V +NWA +
Sbjct: 378 FWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|363748444|ref|XP_003644440.1| hypothetical protein Ecym_1393 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888072|gb|AET37623.1| hypothetical protein Ecym_1393 [Eremothecium cymbalariae
DBVPG#7215]
Length = 530
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 191/351 (54%), Gaps = 31/351 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV A+GAE +TFGI GV+E+ FL+E+ H+ +IR++ L N+ +++ + E+
Sbjct: 183 ELKYDYLVAAVGAEPNTFGIPGVEEHGNFLKEIPHSVQIRKRFLSNVEKANLLPKGDPER 242
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVE +GE D++ +D+++ + + + + L+EA +L+ F+ +L
Sbjct: 243 KRLLTIVVVGGGPTGVETAGEFQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFERKL 302
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQKLI----LNDG----TEVPYGLLVWSTGVGP-- 188
YA L ++ + L+ + V V+ LI + +G T++PYG L+W+TG
Sbjct: 303 TSYAQDVLERTKINLMLKTAVGKVEQDHLIAKTKMENGEVVETKIPYGTLIWATGNKARP 362
Query: 189 --STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
S L K + S + ++ ++ V ++FAVGD L AQVA +
Sbjct: 363 IISNLFKKIPEQNSCTKGLAVNGYMLVKGTNNIFAVGD-------NAFAGLAPTAQVAHQ 415
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYKALVD 297
+ +YL + +++ K G A +K E D PF Y HLG++A +G +A+ D
Sbjct: 416 EAEYLVKIFDKMSKISGFHAQLSKRTEKVDLLFEENGLKPFKYIHLGALAYLGADRAIAD 475
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+ K S + G L++ +WR YL ++S R+RF V +W F RD
Sbjct: 476 ITYGKRS-FYTGGGLLTFYIWRVTYLGMLLSARSRFKVIADWLKLAFFKRD 525
>gi|422294837|gb|EKU22137.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526]
Length = 403
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 172/345 (49%), Gaps = 86/345 (24%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+++Y+ L++A+G+ +TF +VPG+ +
Sbjct: 134 RFEVNYEYLILAVGSTTNTF--------------------------------NVPGVCPD 161
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDD 137
L + EL DF+ +DV Y ++ + VTLIEA++ IL SFD
Sbjct: 162 NHVYFLKQL------------SELYDFLRKDVHILYPDLEHMVSVTLIEASDHILGSFDR 209
Query: 138 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-- 195
RL Y V+ L DGT + +GL VWSTGV + LV++L
Sbjct: 210 RLVDY-------------------VEPNVAWLKDGTPLHFGLCVWSTGVKATPLVQALPP 250
Query: 196 DLPKSPGGRIGIDEWLRVP--SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
PK PGGR+ +D LR+ + VFAVGDC+ + LP LAQVA++Q KYL
Sbjct: 251 SFPKGPGGRLLVDGRLRLQGHDQKGVFAVGDCA----ISETRPLPCLAQVAQQQAKYLGG 306
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS----- 308
+LN+ + + K++ PF YRHLGSMA +G +K +VD + + KG
Sbjct: 307 VLNKYSEP-----HVNKEVP---PFEYRHLGSMAQLGMWKGVVDSAKLDDKKGDEDGKKS 358
Query: 309 -LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L G+ ++L+WR+AY T+ VSW N+ + + W +++FGRDISR
Sbjct: 359 VLTGWTAFLLWRAAYWTKSVSWANKILIPMYWLKSWIFGRDISRF 403
>gi|386720144|ref|YP_006186470.1| NADH dehydrogenase [Stenotrophomonas maltophilia D457]
gi|384079706|emb|CCH14308.1| NADH dehydrogenase [Stenotrophomonas maltophilia D457]
Length = 426
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 170/325 (52%), Gaps = 22/325 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A +RRKLLL ++ K+
Sbjct: 99 LDYDSLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEP-DPARKA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L +VGGGPTGVE +G L++ +R + H+ V L+EA +LSSF + L
Sbjct: 158 AWLSFAIVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G V D+DSQ L + VP +VW+ GV S L ++LD+P
Sbjct: 218 SLKARRQLEKLGVEVLTGTPVSDIDSQGFKLGE-QFVPARTVVWAAGVAASPLARTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 277 LDRAGRVQVQPDLTLPDHPELFVAGDLAALSQADGKPV-PGVAPAAKQMGKYVAEVV--- 332
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
RA E G PF Y G++ATIGR A+V L + L L+G L+W W
Sbjct: 333 ------RARLHGKPEPG-PFKYADYGNLATIGRMAAIVHLGR------LQLSGVLAWWFW 379
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTF 343
+A++ ++ +RNR V +NWA +
Sbjct: 380 LAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|420241063|ref|ZP_14745229.1| NADH dehydrogenase, FAD-containing subunit, partial [Rhizobium sp.
CF080]
gi|398072901|gb|EJL64094.1| NADH dehydrogenase, FAD-containing subunit, partial [Rhizobium sp.
CF080]
Length = 333
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 175/325 (53%), Gaps = 30/325 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD+LVIA G++ + FG + A L+ +H A+ IR++LLL +++ EE+K+
Sbjct: 1 VPYDRLVIATGSDYNYFGHDDWRAWAPGLKTIHEARLIRQRLLLAFEKAELSHDPEEKKA 60
Query: 82 RLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFD 136
LL V++GGGPTGVE +G +++ I RD R+ D++ V LIEA +IL++F
Sbjct: 61 -LLTSVIIGGGPTGVEMAGAIAELGHFMIARDFRKLEP---DHMRVILIEAGPKILATFP 116
Query: 137 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
D L YA L K+GV ++ + + ++ ++ ++W GV S + L
Sbjct: 117 DNLTQYAMKALEKAGVEVMTNLAVESVTKDEVIAGSQRFRTSCVIWGAGVKASPSARWLG 176
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ GGRI ++ L + D+FA+GD + L GK LPALAQVA++QG+YL
Sbjct: 177 IEGKAGGRIPVEPDLSITGFPDIFAIGDTALGLAEDGKP-LPALAQVAKQQGQYL----- 230
Query: 257 RIGKAGGGRANSAK--DMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
G+A AK D + +PF + + G+ A IGR A+ D + +L G L+
Sbjct: 231 -------GKALRAKLLDGKPAEPFHFHNRGNTAVIGRDAAIFDFGK------WTLKGRLA 277
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNW 339
W +W ++ +V++ R V+V W
Sbjct: 278 WFLWALVHVYLLVNFEKRLLVSVQW 302
>gi|367000655|ref|XP_003685063.1| hypothetical protein TPHA_0C04800 [Tetrapisispora phaffii CBS 4417]
gi|357523360|emb|CCE62629.1| hypothetical protein TPHA_0C04800 [Tetrapisispora phaffii CBS 4417]
Length = 530
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 199/364 (54%), Gaps = 39/364 (10%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L+ EP++ K YD L+ A+GAE +TFG+ GV+E FL+E+ ++ EIRRK N+ ++
Sbjct: 176 LKRAEPFEVK--YDYLITAVGAEPNTFGVKGVEEYGHFLKEIPNSLEIRRKFAENIEKAN 233
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 130
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+++ + + + + L+EA
Sbjct: 234 LLPKGDPERKRLLSIVVVGGGPTGVETAGELQDYVSQDLKKFLPSLAEEVQIHLVEALPV 293
Query: 131 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLV 181
+L+ F+ +L YA + L K+ ++L ++ V V+ LI DGT ++ YG L+
Sbjct: 294 VLNMFEKKLSSYAQSVLEKTTIKLHLKTAVGKVEKDHLIAKTKKPDGTVEEQKIGYGTLI 353
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGD---CSGYLESTGK 234
W+TG +V L +P+ + ++++L+V +++FA+GD C
Sbjct: 354 WATGNKARPVVTDLFTKIPEQNQSTRALNVNQFLQVKGSKNIFAIGDNAFCG-------- 405
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGS 285
LP AQVA +Q +YL +++ K G K E D PF Y HLG+
Sbjct: 406 --LPPTAQVAHQQAEYLCKNFDKMEKIDGFHNTLLKKTEKFDLPFEENGFKPFNYIHLGA 463
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+A +G +A+ ++ K S + G +++ VWR YL+ ++S R+RF V +W F
Sbjct: 464 LAYLGSERAIANITYGKRS-FYTGGGLITFYVWRILYLSMILSARSRFKVISDWLKLTFF 522
Query: 346 GRDI 349
RD
Sbjct: 523 KRDF 526
>gi|302674238|ref|XP_003026804.1| hypothetical protein SCHCODRAFT_79659 [Schizophyllum commune H4-8]
gi|300100488|gb|EFI91901.1| hypothetical protein SCHCODRAFT_79659 [Schizophyllum commune H4-8]
Length = 574
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 191/370 (51%), Gaps = 49/370 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV A GAE TF I G+KE A F++E+ A+ ++ + + L + PG S+ E
Sbjct: 213 IGYDYLVYAPGAEVQTFNIPGIKEKACFMKELADAERLQDRFMDCLESAAFPGQSDAEID 272
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE +GE DF+ D++ Y + I +TL+EA +L F +L
Sbjct: 273 RLLHVVVVGGGPTGVEVAGEFHDFLEDDLKAWYPELAQRIRITLVEALPSVLPMFSKQLI 332
Query: 141 HYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGTEVPYGLLVWSTGVGPS----TL 191
Y +S + ++ + +VK+V + ++L EVP G++VW+ G L
Sbjct: 333 DYTEESFKESKIDIMTKTMVKEVKDEAVVLQMPDKSIVEVPCGVVVWAAGNRQRQITMNL 392
Query: 192 VKSLDLPKSPGGRIGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+K L + + +D++++V S +F++GD T T AQVA ++G Y
Sbjct: 393 MKKLGPEQDNRRGLTVDDYMQVKGSNGSIFSIGD-------TTATSYAPTAQVASQEGAY 445
Query: 251 LFSLLNRIGK------------AGGGRANSAKDMELGD-----------------PFVYR 281
L + +++GK A G+A ++ + E PF Y
Sbjct: 446 LARVFSQMGKKDALERRLAELKAEEGKALASPEAEKVHKEEIESVQSAVQKVKIRPFSYS 505
Query: 282 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 341
H GS+A IG KA+ DL + + G ++L WRSAYLT + S RNR VAV+W
Sbjct: 506 HQGSLAYIGSEKAIADL--PFMNGNFASGGMATYLFWRSAYLTTLFSLRNRTLVAVDWMR 563
Query: 342 TFVFGRDISR 351
T VFGRD+SR
Sbjct: 564 TKVFGRDVSR 573
>gi|449301942|gb|EMC97951.1| hypothetical protein BAUCODRAFT_408622 [Baudoinia compniacensis
UAMH 10762]
Length = 569
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 192/358 (53%), Gaps = 55/358 (15%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GV+EN FL+EV AQ+IR++++ + + S EE
Sbjct: 216 EVPFDMLVVGVGAENATFGIPGVRENGCFLKEVPDAQKIRKRIMDCVETATFKDQSPEEI 275
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+R+ + + HVTL+EA +L SF L
Sbjct: 276 KRLLHMVVVGGGPTGVEFAGELQDFFEHDLRKWIPEIANNFHVTLVEALPSVLPSFSKNL 335
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWSTGVGPS 189
Y + + + + +VK+V ++K I + T ++PYGLLVW+TG
Sbjct: 336 IDYTEQTFKEETIEIRTKTMVKNV-TEKYIEAEFTDASGKKQLEQIPYGLLVWATGNALR 394
Query: 190 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+VK L +P R G ++E+L V ++++AVGDC+ + + T AQVA
Sbjct: 395 PVVKDLMSQIPAQKDSRRGLAVNEYLVVKGTENIWAVGDCA--VANYAPT-----AQVAA 447
Query: 246 RQGKYLFSLLNRIGK---------------------AGGGRANSAKDM--------ELGD 276
++G +L L N++ K A N+ KD+ ++G
Sbjct: 448 QEGAFLARLFNQMAKTEQIELELAKLSDDQSKAPKEARDQIFNTMKDLQKRLRRVKQMG- 506
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 334
PF Y H GS+A IG KA+ D+ + + L+ G L+++ WRSAYL+ S + Y
Sbjct: 507 PFEYSHQGSLAYIGSEKAVADI--SWLTGNLATGGQLTYVFWRSAYLSMCFSSKCSSY 562
>gi|322419925|ref|YP_004199148.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacter sp. M18]
gi|320126312|gb|ADW13872.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacter sp. M18]
Length = 418
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 170/328 (51%), Gaps = 25/328 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LVI G+ + FG+ V+ N+ L+E+ A+ +R +L S V K
Sbjct: 95 IPYDYLVIGAGSVTNYFGLESVEGNSFDLKELADAETLRNHILTAFE-SAVVEPDPARKR 153
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSFDDRL 139
L+ V+VGGGPTGVEF+G L + + + + Y + + V L+EA +++L++ ++
Sbjct: 154 ALMTFVIVGGGPTGVEFAGALIELVHFVLAKDYPGLSTHTARVVLVEATDQLLAAMPEKQ 213
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
R Y +L V L+ V D ++++L+DG +P L WS GV + + LD P
Sbjct: 214 RKYTLKKLRSMSVEVLLNARVTDAGPERVMLHDGAIIPAHTLFWSAGVKAAPIAAVLDAP 273
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
++ GGRI + L +P +VF +GD + YLE G + LP A VA + G Y
Sbjct: 274 RTTGGRIPVGPELNLPGHPEVFIIGDMA-YLEQEG-SALPMTAPVAMQMGIY-------- 323
Query: 259 GKAGGGRANSAKDMELG-DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
GRA AK+ PF + + G+MATIGR A+ + G+ G+L+WLV
Sbjct: 324 ----AGRAILAKEQGATLPPFRFHNKGTMATIGRNAAVAS------AFGMDFRGYLAWLV 373
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
W +L ++ +RNR V +NW + F
Sbjct: 374 WLLLHLYYLIGFRNRIVVMLNWVWYYWF 401
>gi|156845483|ref|XP_001645632.1| hypothetical protein Kpol_541p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156116298|gb|EDO17774.1| hypothetical protein Kpol_541p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 532
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 199/352 (56%), Gaps = 31/352 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TFGI GV++ FL+E+ H+ +IR++ N+ +++ + E+
Sbjct: 185 EIKYDYLITAVGAEPNTFGIPGVEKYGNFLKEIPHSYQIRQRFASNIEKANLLPKGDPER 244
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+++ V + + + L+EA +L+ F+ +L
Sbjct: 245 KRLLSIVVVGGGPTGVETAGELQDYVSQDLKKFLPSVAEEVQIHLVEALPVVLNMFEKKL 304
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLI----LNDG----TEVPYGLLVWSTGVGPST 190
YA + L K+ ++L ++ V V+ LI L+DG T++PYG L+W+TG
Sbjct: 305 SSYAQSVLEKTSIKLHLKTAVGLVEEDHLIAKTKLDDGSVKETKIPYGTLIWATGNKARP 364
Query: 191 LVKSL--DLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
L+ +L +P+ S + ++++L+V ++FA+GD + LP AQVA +
Sbjct: 365 LITNLFKKIPEQNSSTRALNVNQFLQVKGSNNIFAIGDNAF-------AGLPPTAQVAHQ 417
Query: 247 QGKYLFSLLNRIGKAGGGR-----ANSAKDMELGD----PFVYRHLGSMATIGRYKALVD 297
+ +YL + +++ A D+ L + PF Y HLG++A +G +A+ +
Sbjct: 418 EAEYLAKVFDKMDNLPNFHDKLIAAKEKPDVLLEENGFKPFKYVHLGALAYLGAERAIAN 477
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+ K S + G +++ VWR Y++ ++S R+RF V +W F RD
Sbjct: 478 ITYGKRS-FYTGGGLITFYVWRMLYVSMILSARSRFKVITDWLKLAFFKRDF 528
>gi|322711332|gb|EFZ02906.1| hypothetical protein MAA_02488 [Metarhizium anisopliae ARSEF 23]
Length = 569
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 185/351 (52%), Gaps = 54/351 (15%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVI +GAE +TFGI GV+E++ FL+E+ AQ+IR+K++ + + G + +E
Sbjct: 223 EIPYDMLVIGVGAENATFGIPGVREHSCFLKEIGDAQQIRKKIMDCVETAAFKGQTSDEI 282
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L SF +L
Sbjct: 283 DRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISPRFKVTLIEALPNVLPSFSKQL 342
Query: 140 RHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + +V+ + ++ DG + +PYGLLVW+TG
Sbjct: 343 IDYTENTFREEKIDIKTKTMVKRVTDTTVEAEVSRPDGGKERVVIPYGLLVWATGNAVRP 402
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQVA 244
+VK L +P R G ++E+L V +D++A+GDC +GY + AQVA
Sbjct: 403 IVKDLITKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT---------AQVA 453
Query: 245 ERQGKYLFSLLNRIGKA-----------------GGGRANSAKDME--------LGD--P 277
++G +L L N + K G A +A ++E + D P
Sbjct: 454 SQEGNFLGRLFNNMAKTENHESRIQELSSKMNLQAGNSAEAAHEIESLEKQLRRIKDIKP 513
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 328
F Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S
Sbjct: 514 FRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFS 562
>gi|147812464|emb|CAN59739.1| hypothetical protein VITISV_027063 [Vitis vinifera]
Length = 578
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 140/235 (59%), Gaps = 12/235 (5%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+ C +V D E F + YD LVIA+GA+ +TF GV E+ FL+E+ AQ+IRR
Sbjct: 143 KIRCRSVIDNSLNEE---FLVDYDYLVIAMGAQVNTFNTPGVNEHCHFLKEIEDAQKIRR 199
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P +S+EE+ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VKD +
Sbjct: 200 SVIDCFERAVLPDLSDEERRRNLHFVIVGGGPTGVEFAAELHDFILEDLVKLYPMVKDLV 259
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILN-----DGTE 174
+T+I++ + IL+ FD+R+ +A + + G+ + G V V + + + +
Sbjct: 260 KITVIQSGDHILNMFDERISSFAERKFGRDGIEVQTGCRVTGVSDKAMTVKVKSKGEICS 319
Query: 175 VPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 227
VPYG++VWSTG+ +++ + ++ + +EWLRV V+A+GDC+
Sbjct: 320 VPYGMVVWSTGIVTRPVLRDFMDQIGQNKRHVLTTNEWLRVEGCDGVYALGDCAA 374
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL S +R + + + G PF Y+HLG A +G
Sbjct: 464 LPATAQVAAQQGAYLSSCFSRRQQCQETPEGPLRFRDSGRHHFRPFRYKHLGQFAPLGGE 523
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A +L + S G S WL W S Y ++ VSWR RF V +W F+FGRD SRI
Sbjct: 524 QAAAELPGDWVSIGHST----QWL-WYSVYASKQVSWRTRFLVVSDWTRRFIFGRDSSRI 578
>gi|366989435|ref|XP_003674485.1| hypothetical protein NCAS_0B00240 [Naumovozyma castellii CBS 4309]
gi|342300349|emb|CCC68108.1| hypothetical protein NCAS_0B00240 [Naumovozyma castellii CBS 4309]
Length = 536
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 193/352 (54%), Gaps = 31/352 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD L+ A+GAE +TFGI GV++ FL+E+ H+ +IR+K NL +++ + E+
Sbjct: 189 EVKYDYLITAVGAEPNTFGIPGVEKYGNFLKEIPHSLQIRKKFAANLDQANMLPPGDPER 248
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ D+R+ + D + + L+EA I L+ F+ +L
Sbjct: 249 KRLLSIVVVGGGPTGVETAGELQDYVNEDLRKFLPSLADEVQIHLVEALPIVLNMFEKKL 308
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTGVGPST 190
YA T L K+ +++ ++ V V++ L+ +DGT +PYG L+W+TG
Sbjct: 309 SSYAQTVLEKTSIKIHLKTAVSKVEANHLVAKTKNDDGTTTEETIPYGTLIWATGNKARP 368
Query: 191 LVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V L +P+ + I+ +L+V ++VFA+GD + LP AQVA +
Sbjct: 369 IVTDLFKKIPEQAKNTRALTINNYLQVIGTKNVFAIGDNAF-------IGLPPTAQVAHQ 421
Query: 247 QGKYL---FSLLNRIGKAGGGRANSAKDMEL------GDPFVYRHLGSMATIGRYKALVD 297
Q +YL F ++++ + AN +L F Y H G++A +G KA+ +
Sbjct: 422 QAEYLAKSFDKMSQLPQFHEKLANRKNKYDLLFEENKFKKFNYIHFGALAYLGSEKAIAN 481
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+ K S + G +++ +WR +YL ++S R RF V +W F RD
Sbjct: 482 ITYGKRSL-YTGGGLITFYIWRLSYLAMLLSARLRFKVITDWMKLAFFKRDF 532
>gi|358399073|gb|EHK48416.1| hypothetical protein TRIATDRAFT_54190 [Trichoderma atroviride IMI
206040]
Length = 416
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 183/361 (50%), Gaps = 48/361 (13%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
C+ DEL+ +F + YD++++ G ++TFGI GV E+A F++ V +A +R +L
Sbjct: 89 CQPAFDELKDE---RFNVDYDRVILVPGCRSNTFGIPGVTEHAIFVKNVANANAVRSRLN 145
Query: 65 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 124
L ++ +PG SE+ + +LLH +VGGGPTG+E + EL+D D + H+K V+
Sbjct: 146 DLLEMASLPGTSEDRQRQLLHVAIVGGGPTGIEMAAELTDLFDGDANVLFPHLKGKASVS 205
Query: 125 LIE-ANEILSSFDDRLRHYATTQLS------KSGVRLVRGIVKDVDSQKLILNDGTEVPY 177
+ + A +IL+ FD +L YA++ L K+ +++ +++Q+ DG Y
Sbjct: 206 VYDVAPQILAPFDQKLAEYASSALKTGRVNIKTNTHILKITQNTIETQE----DGA-TGY 260
Query: 178 GLLVWSTGVGPSTLVKSLDLPKSPGG--RIGIDEWLRV-----PSVQDVFAVGDCSGYLE 230
G+L+W+TG LV L+L K+ G RI D+ L +++ VFA+GD +G +E
Sbjct: 261 GMLIWATGNKSVPLVDKLNLRKTEKGLVRILTDDRLNAFALDGNALRSVFAMGD-AGDIE 319
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIG 290
LP A+VA ++ Y+ +LN+ + PF Y+ + G
Sbjct: 320 G---GTLPTTAEVAIQKADYIIKVLNKNDTS---------------PFEYKQRSLVTYTG 361
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
R +V ++ G+ +WL WRS SWR + + W ++ GR+I
Sbjct: 362 RRDGVVQGKR-------EYTGYGAWLSWRSGNFFWTRSWRRKILMCYAWFMDWLDGREII 414
Query: 351 R 351
R
Sbjct: 415 R 415
>gi|255078330|ref|XP_002502745.1| predicted protein [Micromonas sp. RCC299]
gi|226518011|gb|ACO64003.1| predicted protein [Micromonas sp. RCC299]
Length = 556
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 147/237 (62%), Gaps = 15/237 (6%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V C+ + E+ P +F + YDKLV+A+GA +TFG GV+E+A FL+EV A +IRRK
Sbjct: 114 VRCKDES-EVTAANP-EFTLPYDKLVVAVGAPPNTFGTPGVREHAKFLKEVDDAIDIRRK 171
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
L + +PG+ EEE+ ++L +VVGGGPTGVEF+ EL DF+ DV + Y ++D I
Sbjct: 172 LADLFETASLPGVPEEEQRKMLSVLVVGGGPTGVEFAAELHDFLREDVPRLYPALRDKIS 231
Query: 123 VTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLV--RGIVKDVDSQKLILNDGT----EV 175
+T+++ A+ IL+++D R+ YA + + G+R++ R + + ++ T ++
Sbjct: 232 ITVVQSADHILNTYDARISKYAEEKFKRDGIRILTNRRVTDVSQAHASVMCKKTKKIEKI 291
Query: 176 PYGLLVWSTGVGPSTLVKSLDLPKSPGGR---IGIDEWLRVPSVQ---DVFAVGDCS 226
P+G+ VWSTG+G + LV+S+ R + +D++L+V ++ V A+GDC+
Sbjct: 292 PFGVCVWSTGLGTAPLVRSIIAAAGQPPRRRAVSVDKYLQVRGLEPRGSVLALGDCA 348
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 297
PA AQVA +QG+YL LN G+A R +D PF Y HLGS AT+G +A +D
Sbjct: 445 PATAQVANQQGEYLARELNAQGRA---RRAGVEDPAPTRPFEYVHLGSFATLGGEQAALD 501
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ G + ++W Y + VSWRN+ V ++W V+GRD SR+
Sbjct: 502 TSGSPLPGDFVSQGIGTMVLWYGVYFSNCVSWRNKAMVVLDWTKKGVWGRDSSRV 556
>gi|159488552|ref|XP_001702271.1| mitochondrial NADH dehydrogenase [Chlamydomonas reinhardtii]
gi|158271248|gb|EDO97072.1| mitochondrial NADH dehydrogenase [Chlamydomonas reinhardtii]
Length = 591
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 23/265 (8%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+I YDK V+A+G + +TFG+ GVKE+ F++EV A +R+++ L+ +PG SEE
Sbjct: 105 QFEIQYDKAVVAVGEQPATFGVKGVKEHCFFMKEVSDAVALRKRIAEKFELASLPGTSEE 164
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
++ LH VVVGGGPTGVEF+G LSDF+ D++++Y + Y+ VTL++ A +IL+ FD
Sbjct: 165 DRKAALHFVVVGGGPTGVEFAGTLSDFVREDLKKKYPALMKYVKVTLLQSAQQILTQFDA 224
Query: 138 RLRHYATTQLSKSGVRLVRGI---------VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188
L AT L SGV + G+ V V +++L G E+PYG+ VWS G P
Sbjct: 225 GLGQRATEALESSGVEVRTGVRVVEITINKVMLVSDAQVLLKGGEELPYGVCVWSAGNAP 284
Query: 189 STLVKSL---------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
LV + P ++ +D +LRV D+ A+GDCS L + LP+
Sbjct: 285 RPLVTQIASQVAEQAAAAEAPPNAKLCVDSFLRVVGATDLMALGDCSLVLGNR----LPS 340
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGG 264
AQVA +QG YL L+N + G G
Sbjct: 341 TAQVAGQQGAYLAHLINSQYQLGVG 365
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF + LG MA +G KAL + + + L L G +++L+W+S Y+T+ VS+RNR +
Sbjct: 517 PFEFLSLGIMAYVGNDKALTQV-EAFDVINLKLYGSVAFLLWKSVYITKQVSFRNRVLIL 575
Query: 337 VNWATTFVFGRDIS 350
+W T VFGRDIS
Sbjct: 576 FDWMKTRVFGRDIS 589
>gi|408821867|ref|ZP_11206757.1| pyridine nucleotide-disulfide oxidoreductase [Pseudomonas
geniculata N1]
Length = 426
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 170/325 (52%), Gaps = 22/325 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A +RRKLLL ++ +K+
Sbjct: 99 LDYDSLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEP-DPAKKA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF + L
Sbjct: 158 AWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++L++P
Sbjct: 218 SLKARRQLEKLGVEVLTGTPVSDIDSQGFTLGD-EFVPARTVVWAAGVAASPLARTLEVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L + ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 277 LDRAGRVQVQPDLTLSGHPELFVAGDLAVLNQANGKPV-PGVAPAAKQMGKYVAEVI--- 332
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
RA E G PF Y G++ATIGR A+V L + L L+G L+W W
Sbjct: 333 ------RARLHGKPEPG-PFKYADFGNLATIGRMAAIVHLGR------LQLSGVLAWWFW 379
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTF 343
+A++ ++ +RNR V +NWA +
Sbjct: 380 LAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|359407101|ref|ZP_09199734.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella stercorea
DSM 18206]
gi|357553629|gb|EHJ35375.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella stercorea
DSM 18206]
Length = 449
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 179/359 (49%), Gaps = 31/359 (8%)
Query: 4 HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
V E + L+ KI YD LV+A GA + FG ++E A ++ V A +R L
Sbjct: 84 EARMVDSEKKILQTSIGKIDYDYLVLAAGATTNFFGNKNIEEWAIPMKTVPEAMGLRNAL 143
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--- 120
L NL + + +EEE+ LL+ V+VGGG TGVE +G L++ +RY DY
Sbjct: 144 LSNLERA-LTCATEEERQELLNVVIVGGGATGVEIAGALAEM------RRYVIPYDYPDM 196
Query: 121 ----IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTE 174
+H+ LIEA + +L+ A L GV + G +V D K+++ DGTE
Sbjct: 197 DSSLMHIYLIEAGDRLLAGLSQESSQKAYEFLKSMGVDIQFGKMVTDYRDHKVVMKDGTE 256
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTG 233
+P +W +G+ + + + G R +DE+ R+ V DVFA+GD C ++
Sbjct: 257 IPTRTFLWVSGIRANAMPGIDESRLGRGFRFKVDEFNRIQGVDDVFAIGDQCLQTSDAAY 316
Query: 234 KTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 293
P +AQVA +Q K L L I + A +A F Y++LGSMATIGR K
Sbjct: 317 PNGHPQVAQVAIQQAKNLAKNLKLINQGADSNALTA--------FHYKNLGSMATIGRNK 368
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A+V++ + + GF +W++W +L ++ +N+ V +NW +V D R+
Sbjct: 369 AVVEIGKFRSQ------GFFAWVLWLVVHLRSILGVKNKMMVLLNWLWKYVSYNDSIRM 421
>gi|358056814|dbj|GAA97164.1| hypothetical protein E5Q_03840 [Mixia osmundae IAM 14324]
Length = 924
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 194/358 (54%), Gaps = 38/358 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV A+GAE +TFGI GVKE+A FL+E+ A+++R+ ++ + + G S EE
Sbjct: 310 LPYDYLVYAVGAENNTFGIPGVKEHACFLKEIWDAEKVRKTVMDCVETATFKGQSNEEID 369
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH VVVGGGPTGVE +GEL DF+ D+ Y + + +TL+EA +L F +L
Sbjct: 370 RLLHMVVVGGGPTGVELAGELHDFLAEDLANWYPEIAGRVRITLVEALPNVLPMFSKQLI 429
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT-----EVPYGLLVWSTGVG--PST-- 190
Y T+ ++ + L R +VK+V K+I+ G E+PYG+LVW+TG P T
Sbjct: 430 EYTTSTFKENKIDVLTRTMVKEVQ-DKVIVAQGEDKKLHEIPYGMLVWATGNTSRPVTRK 488
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
L+ S+ ++ + +++ L + +D++A+GD T AQ A +QG+Y
Sbjct: 489 LMASIGEAQANKRGLQVNDRLELAGAKDIWALGD-------ATATAYAPTAQAASQQGQY 541
Query: 251 LFSLLNRIGKA-------GGGRANSAKDME----------LGDPFVYRHLGSMATIGRYK 293
L +++ K RA+ +D E F Y H GS+A IG K
Sbjct: 542 LARCFSQMYKKEKLEAALDSARAHKDQDTEGIMKQLRRVTNVKSFSYSHQGSLAYIGSDK 601
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
A+ DL + ++ G + L WRSAY++ + S RNR V ++WA +F RDISR
Sbjct: 602 AIADL--PFLNGNVATGGVATMLFWRSAYVSTLFSLRNRALVVLDWAKVKIFRRDISR 657
>gi|393723305|ref|ZP_10343232.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Sphingomonas sp. PAMC 26605]
Length = 471
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 173/322 (53%), Gaps = 22/322 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE-EEK 80
+ YD L++A GA S FG G E+A ++ + A +RR++LL L ++ EE+
Sbjct: 104 LHYDSLILATGATHSYFGNEGWAEHAPGIKTIDDALHVRRQILLALEHAETNRQQNVEER 163
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDR 138
+ L ++VGGGPTGVE +G +++ + ++ + + + LIEA + +L++F +R
Sbjct: 164 AEFLTFLIVGGGPTGVEMAGAVAELTRHAADMDFHYITRRCVRIILIEAGQRLLATFPER 223
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L A L K GV + G V +D+ +++D + ++W+ GV S + LDL
Sbjct: 224 LSEAARRALVKLGVEVRLGSRVTSIDAAGAVVDD-ELIRSATIIWAAGVKASPAAQWLDL 282
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GR+ +D L+V V+A+GD + +TG+ V P +A A++QG Y+ +
Sbjct: 283 APDRAGRVIVDASLQVADRAGVYAIGDTAAATSATGQPV-PGIAPAAKQQGVYVAHHIA- 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
K G RA ++ F YRH GS+ATIGR +A+VDL + +G +W++
Sbjct: 341 -AKLGHRRAPTS--------FRYRHFGSLATIGRKRAVVDL------GWVRFSGLAAWIL 385
Query: 318 WRSAYLTRVVSWRNRFYVAVNW 339
W +A++ + +RNRF V NW
Sbjct: 386 WSTAHIYFLAGFRNRFVVGANW 407
>gi|410074555|ref|XP_003954860.1| hypothetical protein KAFR_0A02890 [Kazachstania africana CBS 2517]
gi|372461442|emb|CCF55725.1| hypothetical protein KAFR_0A02890 [Kazachstania africana CBS 2517]
Length = 528
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 191/354 (53%), Gaps = 34/354 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TF I GV E+ FL+E+ + EIR K N+ ++ + E+
Sbjct: 180 EIKYDYLISAVGAEPNTFNIPGVNEHGLFLKEIPDSLEIRNKFASNIEKANSLPEGDPER 239
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+++ + + + L+EA +L+ F+ +L
Sbjct: 240 KRLLSIVVVGGGPTGVETAGELQDYVSQDLQKFLPSIAKEVQIHLVEALPTVLNMFEKKL 299
Query: 140 RHYATTQLSKSGV--RLVRGIVKDVDSQKLI-----LNDGT----EVPYGLLVWSTG--V 186
YA L K+ + RL +VK V+ + L+ DG+ +PYG L+W+TG V
Sbjct: 300 SSYAKKVLEKTTIKLRLSTAVVK-VEEKHLVSKTKNPEDGSTTEETIPYGTLIWATGNKV 358
Query: 187 GP--STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
P S L K + S + +++ +V ++FA+GD + ++ LP AQVA
Sbjct: 359 RPLISDLFKKIPEQNSSTRALVTNQFCQVKGSNNIFAIGD-NAFMG------LPPTAQVA 411
Query: 245 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYKAL 295
+Q +YL L +++ + G + E D PF YRHLG++A +G KA+
Sbjct: 412 NQQAEYLSKLFDKMSQVNGFHDQLSARKEKYDLLFEENKFKPFSYRHLGALAYLGSEKAI 471
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
++ K S + G +++ +WR YL+ ++S R RF V ++W F RD
Sbjct: 472 ANITYGKRSL-YTGGGLMTFYIWRIVYLSMLLSARTRFKVCLDWLKLAFFKRDF 524
>gi|225447633|ref|XP_002274469.1| PREDICTED: external NADH-ubiquinone oxidoreductase 2, mitochondrial
[Vitis vinifera]
gi|296084969|emb|CBI28384.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 141/235 (60%), Gaps = 10/235 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+ C +V D + +F + YD LVIA+GA+ +TF GV E+ FL+E+ AQ+IRR
Sbjct: 140 KIRCRSVIDN-SLVGNEEFLVDYDYLVIAMGAQVNTFNTPGVNEHCHFLKEIEDAQKIRR 198
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P +++EE+ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VKD +
Sbjct: 199 SVIDCFERAVLPDLTDEERRRNLHFVIVGGGPTGVEFAAELHDFILEDLVKLYPMVKDLV 258
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILN-----DGTE 174
+T+I++ + IL+ FD+R+ +A + + G+ + G V V + + + +
Sbjct: 259 KITVIQSGDHILNMFDERISSFAERKFGRDGIEVQTGCRVTGVSDKAMTVKVKSKGEICS 318
Query: 175 VPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 227
VPYG++VWSTG+ +++ + ++ + +EWLRV V+A+GDC+
Sbjct: 319 VPYGMVVWSTGIVTRPVLRDFMDQIGQNKRHVLTTNEWLRVEGCDGVYALGDCAA 373
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL S +R + + + G PF Y+HLG A +G
Sbjct: 463 LPATAQVAAQQGAYLSSCFSRRQQCQETPEGPLRFRDSGRHHFRPFRYKHLGQFAPLGGE 522
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A +L + S G S WL W S Y ++ VSWR RF V +W F+FGRD SRI
Sbjct: 523 QAAAELPGDWVSIGHST----QWL-WYSVYASKQVSWRTRFLVVSDWTRRFIFGRDSSRI 577
>gi|430004522|emb|CCF20321.1| Putative transmembrane respiratory NADH-dehydrogenase (Putative
Ubiquinone reductase); PNDR family protein [Rhizobium
sp.]
Length = 438
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 171/323 (52%), Gaps = 26/323 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A G+E + FG + A L+ +H A+ IR++LLL +++ EEK
Sbjct: 106 VHYDILVLATGSEYNYFGHEDWRAWAPGLKTIHEARLIRQRLLLAFEKAEL-STDSEEKQ 164
Query: 82 RLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFD 136
LL VV+GGGPTGVE +G +++ I RD R+ ++ V L+EA ILS+F
Sbjct: 165 ALLTSVVIGGGPTGVEMAGAIAELGHFMISRDFRRLQP---EHFRVILVEAGPRILSAFP 221
Query: 137 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+ L YA +L K+GV ++ + + S+++++ G + G ++W GV S L
Sbjct: 222 EELADYARKELEKAGVEVLTNLPVESISKEVVVAGGRSIRTGSVIWGAGVKASPAALWLG 281
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ GGRI ++ L V DV++VGD + L GK LPALAQVA++QG+YL
Sbjct: 282 IEGKAGGRIPVNPDLSVTGHPDVYSVGDTALGLAEDGKP-LPALAQVAKQQGEYL----- 335
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
GKA R + E PF + G+ A IGR A+ D + + L G +W
Sbjct: 336 --GKALRLRLTQGRQPE---PFRFNERGNTAVIGRNAAIFDFGKRR------LKGRFAWF 384
Query: 317 VWRSAYLTRVVSWRNRFYVAVNW 339
+W ++ +V++ R V++ W
Sbjct: 385 LWAIVHVYLLVNFEKRLLVSIQW 407
>gi|340345792|ref|ZP_08668924.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520933|gb|EGP94656.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum koreensis MY1]
Length = 452
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 183/350 (52%), Gaps = 42/350 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE-- 79
I YD LV+ALG+E + FG+ V++NA ++ ++ A +R +++ L +D +E +
Sbjct: 105 IYYDYLVVALGSETNFFGMADVEKNAYTMKTLNDAVVLRNRVVDMLEQAD----NETDTI 160
Query: 80 -KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFD 136
+ LL V+VGGG G+E +GEL D ++ D R+ Y + KD I V ++EA IL F+
Sbjct: 161 LRDSLLTFVIVGGGFAGIETAGELLDLLL-DARKHYPTIHKDDIRVIVLEALPMILPGFN 219
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYG-------------LLVW 182
++L +A ++ + G+ + +R V D ++ + E P L+W
Sbjct: 220 EKLADFAKEKMIQRGIEIKLRMAVTSFDGTEVSVKSLDENPKDSIDKSKINGIRTKTLIW 279
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
+ GV P +K + K+ G+I ++++L VP VFA+GDC+ +++ AQ
Sbjct: 280 TAGVTPVNTIKR-SMFKTDKGKIIVNDFLEVPEFPGVFAIGDCALFMDPQTNRPFAPTAQ 338
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
+AE Q K LN + K NS K+ FVY G MA IG+ +
Sbjct: 339 IAEAQAKIAAHNLNALIK------NSEKE-----KFVYHSKGQMAIIGKRTGIATFL--- 384
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G++++GFL+WL+WR+ YL+++ S + + ++W + RDISR+
Sbjct: 385 ---GMNISGFLAWLIWRNVYLSKIPSPDKKVRIFLDWIIDLFYDRDISRL 431
>gi|367009724|ref|XP_003679363.1| hypothetical protein TDEL_0B00230 [Torulaspora delbrueckii]
gi|359747021|emb|CCE90152.1| hypothetical protein TDEL_0B00230 [Torulaspora delbrueckii]
Length = 524
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 194/354 (54%), Gaps = 31/354 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I Y+ L+ A+GAE +TFG+ GV+E+ FL+E+ H+ +IR K NL +++ + E+
Sbjct: 177 EIKYNYLITAVGAEPNTFGVKGVEEHGHFLKEIEHSLQIREKFAKNLEKANLLPKGDPER 236
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+++ + + + + L+EA I L+ FD +L
Sbjct: 237 KRLLSIVVVGGGPTGVEAAGELQDYVHQDLKKFLPSLAEEVQIHLVEALPIVLNMFDKKL 296
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPST 190
YA L+ S ++L +R V V++++L+ DG+ +PYG L+W+TG
Sbjct: 297 SSYAQKVLTDSSLKLHLRTAVGKVEAEQLVAKTKHEDGSVTEETIPYGTLIWATGNKARP 356
Query: 191 LVKSL--DLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V L +P+ S + ++++L V ++FA+GD + LP AQVA +
Sbjct: 357 IVTDLFKKIPEQNSCTRALTVNQFLHVKGSNNIFAIGDNAF-------AGLPPTAQVAHQ 409
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGDP---------FVYRHLGSMATIGRYKALVD 297
Q +YL +++ + G + E D F Y H G++A +G KA+ +
Sbjct: 410 QAEYLAKSFDKMAQLPGFHEKIVQRKEKVDVLFEENGFKGFNYIHYGALAYLGAEKAIAN 469
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ K S + G +++ +WR YL+ ++S R+RF V +W F RD +
Sbjct: 470 ITYGKRSL-YTGGGLITFYIWRVLYLSMILSARSRFKVITDWIKLAFFKRDFFK 522
>gi|419963369|ref|ZP_14479344.1| NADH dehydrogenase [Rhodococcus opacus M213]
gi|414571218|gb|EKT81936.1| NADH dehydrogenase [Rhodococcus opacus M213]
Length = 460
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 169/332 (50%), Gaps = 31/332 (9%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA S FG E+A ++ + A E+R ++L +++ EE++RL
Sbjct: 108 YDSLIVSAGARQSYFGNDHFAEHAPGMKSIDDALELRGRILGAFERAELS-TDAEERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH--VKDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + Y + +D V L A+ +L F DRL
Sbjct: 167 LTFVVVGAGPTGVEMAGQIAELAHRTLVGAYRNFDTRDARIVLLDAASAVLPPFGDRLGS 226
Query: 142 YATTQLSKSGVRLVRG-IVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVKSLD 196
A +L + GV + G V DVD+ + + DG + VWS GV S L + L
Sbjct: 227 TAAERLERIGVEVRLGATVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASPLARQLA 286
Query: 197 LPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
GRI + E L VP ++ F +GD + LP +AQVA + G+Y
Sbjct: 287 EQSGAELDRAGRIAVREDLTVPGHREAFVIGDM------MARDRLPGVAQVAIQGGRYA- 339
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+I G RA S + PF YR GSMATI R+ A+V + G+ LAGF
Sbjct: 340 --ARQIAADAGRRATSPDRV----PFRYRDKGSMATISRFNAVVKV------GGIELAGF 387
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+W++W + ++ VV +R+R ++W TF+
Sbjct: 388 LAWILWLAVHVVYVVGFRSRLSTLMSWTWTFL 419
>gi|359793950|ref|ZP_09296680.1| NADH dehydrogenase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359249814|gb|EHK53382.1| NADH dehydrogenase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 443
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 178/345 (51%), Gaps = 28/345 (8%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
E V RT+ ++ YD L+IA GA + FG + A L+ + A EIR ++L
Sbjct: 105 VEGVDTGSRTVLTANRRLPYDYLIIATGARHAYFGHDDWENTAPGLKTIPDATEIRGRIL 164
Query: 65 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDY 120
++V E + +LL VV+GGGPTGVE +G + + I+RD R S
Sbjct: 165 SAFEKAEVTE-DPELRRKLLTFVVIGGGPTGVELAGAIVELARKAIVRDFRNIDSSTA-- 221
Query: 121 IHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYG 178
V L+EA++ +L++F ++L A QL + GV + G V D + L+DG +
Sbjct: 222 -RVVLVEADKRLLTAFPEKLSDSAKRQLERLGVEVKLGAAVAACDGNGVALSDGQRIASA 280
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
++W+ GV S K LD+P GR+ +D+ L VP + V+ +GD + + G+ + P
Sbjct: 281 CVLWAAGVMASRAAKWLDVPSDRAGRVIVDDHLHVPGREGVYVIGDTACVKGTDGRPI-P 339
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+A A++ G+Y+ L+ R G AG A PF Y G++ATIGR A+ D+
Sbjct: 340 GVAPAAKQMGRYVAGLI-RAGLAGKPVA----------PFRYSDYGNLATIGRKAAVADV 388
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ +GFL+W +W A+L +V +RNR V ++WA +
Sbjct: 389 GR------FQFSGFLAWQLWSFAHLWFLVGFRNRIVVFLDWAWAY 427
>gi|328852468|gb|EGG01614.1| hypothetical protein MELLADRAFT_110853 [Melampsora larici-populina
98AG31]
Length = 654
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 199/400 (49%), Gaps = 77/400 (19%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLVI++G+ ++T G+ G+ N + L+ ++ +EIR K++ NL +++P + EEE
Sbjct: 227 FYVPYDKLVISVGSVSNTHGVPGLN-NCSQLKTINDVREIRSKIINNLETANLPAVEEEE 285
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFDD 137
+ RLL VV GGGPTGVEF+ EL D I D+ + + + + + LI++ + IL+++ +
Sbjct: 286 RKRLLSFVVCGGGPTGVEFASELYDMITEDMLKYFPKLLGSEVSIHLIQSRDHILNTYSE 345
Query: 138 RLRHYATTQLSKSGV-RLVRGIVKDVDSQKLILNDGTE-----VPYGLLVWSTGVGPSTL 191
++ YA + +K+ + ++ VK++ + + T+ +P G ++WSTG+ +
Sbjct: 346 KISQYAEKRFAKAEIDTILNARVKEITPTSVTYTNKTDKKEHTIPAGFVLWSTGIAMNPF 405
Query: 192 VKSLD--LP------------------------------KSPGGRIGIDEW--------- 210
K + LP K+ G+I +E+
Sbjct: 406 TKKVAGYLPNQYHKHALEVDSQLRLIDPRCFPKLVDQCDKNGDGQIDFEEFEMMMKHVRR 465
Query: 211 ------LRVPSVQDVFAVGDCSG------------YLESTGK-TVLPALAQVAERQGKYL 251
+ + V+DVF D + E + + T LPA AQVA ++GKYL
Sbjct: 466 KFPTSQMHIEKVRDVFEKYDADHDNNLGLNELAKMFQEISNRLTSLPATAQVANQEGKYL 525
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
N++ K + ++ E +PF YRHLGS+A IG A+ D N G G
Sbjct: 526 AKKFNKLVKD---KEKKVENEENEEPFSYRHLGSLAYIGN-SAVFDFGGNGSFAG----G 577
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
++ +WRS Y + VS R R + V+W ++GRDIS+
Sbjct: 578 LIASYLWRSIYWSEQVSMRTRVLLMVDWIKRGIWGRDISK 617
>gi|432337215|ref|ZP_19588663.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430775850|gb|ELB91325.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 448
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 169/332 (50%), Gaps = 31/332 (9%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA S FG E+A ++ + A E+R ++L +++ EE++RL
Sbjct: 96 YDSLIVSAGARQSYFGNDHFAEHAPGMKSIDDALELRGRILGAFERAELS-TDAEERARL 154
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH--VKDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + Y + +D V L A+ +L F DRL
Sbjct: 155 LTFVVVGAGPTGVEMAGQIAELAHRTLVGAYRNFDTRDARIVLLDAASAVLPPFGDRLGS 214
Query: 142 YATTQLSKSGVRLVRG-IVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVKSLD 196
A +L + GV + G V DVD+ + + DG + VWS GV S L + L
Sbjct: 215 TAAERLERIGVEVRLGATVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASPLARQLA 274
Query: 197 LPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
GRI + E L VP ++ F +GD + LP +AQVA + G+Y
Sbjct: 275 EQSGAELDRAGRIAVREDLTVPGHREAFVIGDM------MARDRLPGVAQVAIQGGRYA- 327
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+I G RA S + PF YR GSMATI R+ A+V + G+ LAGF
Sbjct: 328 --ARQIAADAGRRATSPDRV----PFRYRDKGSMATISRFNAVVKV------GGIELAGF 375
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+W++W + ++ VV +R+R ++W TF+
Sbjct: 376 LAWILWLAVHVVYVVGFRSRLSTLMSWTWTFL 407
>gi|168013036|ref|XP_001759207.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689520|gb|EDQ75891.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 639
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 154/264 (58%), Gaps = 14/264 (5%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV C ++D ++ F++ YD LV+A+GA ++TFG GV+E FL+E+ A++IR
Sbjct: 202 KVMCRDISD-VKCKGKEDFELEYDYLVVAVGATSNTFGTKGVEEYCHFLKEIEDAEKIRG 260
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+++ + +P +S+E++ +LL V+VGGGPTGVE++ EL D I D+ Y ++ +
Sbjct: 261 RIVDCFETASLPHLSDEDRRKLLSFVIVGGGPTGVEYAAELHDLIYEDLTSLYPELQKIV 320
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDG-TE 174
++TL+++ + IL++FD R+ YA + S+ G+ + V G+ ++ S K E
Sbjct: 321 NITLVQSGDHILNTFDGRISEYAEKKFSREGIDVKIGSRVLGVTEETISFKSKATGKLME 380
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLE 230
+PYG++VWSTG+G ++ D K G + DEWLRV + V+A+GDC+ +
Sbjct: 381 IPYGMIVWSTGIGTRPVIA--DYMKQIGQTDRRVLATDEWLRVKNTDGVYALGDCATVEQ 438
Query: 231 STGKTVLPALAQVAERQGKYLFSL 254
+ L ++A++ G S+
Sbjct: 439 RKIAEDIADLFKLADKDGDGYLSV 462
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 58/125 (46%), Gaps = 22/125 (17%)
Query: 238 PALAQVAERQGKYLFSLLNRIGKA----------GGGRANSAKDMELGDPFVYRHLGSMA 287
PA AQVA +QG+YL N + GGGR PF YRHLG A
Sbjct: 527 PATAQVAAQQGEYLALSFNHMAMGSPDEGPIRVRGGGRHRY-------HPFRYRHLGQFA 579
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
+G +L + S G S WL W S Y ++ VSWR R V +W FVFGR
Sbjct: 580 PLGGETTAAELPGDWVSIGRST----QWL-WYSVYASKQVSWRTRALVIFDWTKRFVFGR 634
Query: 348 DISRI 352
D SR+
Sbjct: 635 DSSRM 639
>gi|319788350|ref|YP_004147825.1| NADH dehydrogenase (ubiquinone) [Pseudoxanthomonas suwonensis 11-1]
gi|317466862|gb|ADV28594.1| NADH dehydrogenase (ubiquinone) [Pseudoxanthomonas suwonensis 11-1]
Length = 430
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 175/334 (52%), Gaps = 23/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ + A E+RRKLLL ++ E++
Sbjct: 101 LHYDYLLLATGATHAYFGNEQWAQHAPGLKSLDDALELRRKLLLAFERAEA-CDDPAERA 159
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDRL 139
L +VGGGPTGVE +G L++ +R ++ ++ V LIEA +L+SF + L
Sbjct: 160 AWLEFAIVGGGPTGVELAGTLAEIARHTLRDQFRNINPATARVRLIEAGPRVLASFPEDL 219
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV + G+ V D+++ L D T V +VW+ GV S L +SL +P
Sbjct: 220 SEKARRQLEKLGVEVSTGVPVTDINAGGYRLGD-TYVHSRTIVWAAGVAASPLARSLGVP 278
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G V P +A A++ G++ +
Sbjct: 279 LDRAGRVPVEPDLSVPGHPEIFVGGDLAAVEQADGSPV-PGVAPAAKQMGRH-------V 330
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+A R A PF YR G++ATIGR A+VD+ G+ L+G L+W W
Sbjct: 331 ARAIQARLQGAP----ARPFRYRDFGNLATIGRMAAVVDI------HGIRLSGVLAWWFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNR V +NWA + + +RI
Sbjct: 381 LAAHVFFLIGFRNRLVVLLNWAWAYWSYQRAARI 414
>gi|312281875|dbj|BAJ33803.1| unnamed protein product [Thellungiella halophila]
Length = 578
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 138/215 (64%), Gaps = 7/215 (3%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LVIA GA+++TF I GV+EN FL+EV AQ IRR ++ + + +P ++EE
Sbjct: 155 EFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRRTVIDSFEKASLPDLNEE 214
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y K+ +H+TL+E A+ IL+ FD
Sbjct: 215 ERKRILHFVVVGGGPTGVEFAAELHDFVTEDLVKLYPKAKNLVHITLLEAADHILTMFDK 274
Query: 138 RLRHYATTQLSKSG--VRLVRGIVKDVDSQKLILNDG--TEVPYGLLVWSTGVGPSTLVK 193
R+ +A + ++ G V+L +VK D + G + +PYG++VWSTG+G ++K
Sbjct: 275 RITEFAEEKFNRDGIDVKLGSMVVKVNDKEISAKTKGELSSIPYGMIVWSTGIGTRPVIK 334
Query: 194 SLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
G R + DEWLRV +++A+GDC+
Sbjct: 335 DFMKQIGQGNRRALATDEWLRVEGCDNIYALGDCA 369
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL +R+ + + G PF YRHLG A +G
Sbjct: 464 LPATAQVAAQQGTYLAKCFDRMEECEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGE 523
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 524 QTAAQLPGDWVSIGQSS----QWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSRI 578
>gi|408371469|ref|ZP_11169234.1| NADH dehydrogenase [Galbibacter sp. ck-I2-15]
gi|407743059|gb|EKF54641.1| NADH dehydrogenase [Galbibacter sp. ck-I2-15]
Length = 435
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 180/329 (54%), Gaps = 26/329 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
KI +D+LV+A GA+ + FG +E+A L+ + A ++R ++L +L ++ ++ +
Sbjct: 97 KIPFDQLVLAPGAQYNYFGNEEWQEHAPGLKTISDALKVRERILQSLEEAEQ---LQDPQ 153
Query: 81 SRLLHC--VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFD 136
R +H V++GGGPTGVE +G +++ R +R + +VK+ I + L+EA IL+ F
Sbjct: 154 QRQMHLTYVIIGGGPTGVEMAGAIAEIAKRTMRNGFKNVKEEEIRIFLVEAAPNILNGFP 213
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L L + GV+++RG V ++ + L G+ + ++W+ G+ S L+ SL
Sbjct: 214 EPLGDKGKDMLEELGVKVLRGTPVVKIERDTVHLKVGS-IHSSNIIWAAGIKASPLLDSL 272
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ + GR+ ++ L +P D+F +GD + + + +GK LPALA VA +QG YL L
Sbjct: 273 QVEQDRLGRVFVNGDLSIPGYPDIFVLGDAAHFKDPSGKP-LPALASVARQQGIYLGKQL 331
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R K L F Y G+MATIG KA+ ++R GL +GF +W
Sbjct: 332 AR----------KEKGNYLPPHFRYIDKGTMATIGTAKAVANIR------GLKFSGFFAW 375
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
++W + ++ ++ +RNR V V W ++
Sbjct: 376 VLWSTIHILLLIGFRNRINVFVEWVWNYI 404
>gi|41581271|emb|CAE47920.1| pyridine nucleotide-disulphide oxidoreductase family protein,
putative [Aspergillus fumigatus]
Length = 743
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 190/360 (52%), Gaps = 64/360 (17%)
Query: 21 KISYDKLVIALGAEASTF------GIHGVKENATFLREVHHAQEIRRKLL---LNLMLSD 71
++ +D LV+ +GAE +TF GI GVKE++ FL+EV AQ+IR++++ M D
Sbjct: 216 EVPFDMLVVGVGAENATFVNGVITGIKGVKEHSCFLKEVGDAQKIRKRIMDCVETAMFKD 275
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 130
P EEE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA
Sbjct: 276 QP---EEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPEIKDNFHVTLVEALPN 332
Query: 131 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLV 181
+L F +L Y + + + + + +VK+V + ++ DGT+ +PYGLLV
Sbjct: 333 VLPMFSKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLV 392
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG +V+ L +P R G ++E+L V ++V+AVGDC+ T
Sbjct: 393 WATGNAVRNVVRDLMNQIPAQKNSRRGLAVNEYLVVNGTENVWAVGDCAV-------TNY 445
Query: 238 PALAQVAERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD-------- 276
AQVA ++G +L L N R+ +A N + ++ D
Sbjct: 446 APTAQVASQEGAFLARLFNTMAKTEAIEKELKRLSEAQAVAKNEEERNKIFDEIRERQKQ 505
Query: 277 --------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 328
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S
Sbjct: 506 LRRTKQIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTVTYLFWRSAYLSMCFS 563
>gi|397734647|ref|ZP_10501351.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
gi|396929435|gb|EJI96640.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
Length = 462
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 169/332 (50%), Gaps = 31/332 (9%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA S FG E+A ++ + A E+R ++L +++ EE++RL
Sbjct: 110 YDSLIVSAGARQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFERAEL-STDPEERARL 168
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + Y ++ +D V L A+ +L F DRL
Sbjct: 169 LTFVVVGAGPTGVEMAGQIAELAHRTLVGAYRNIDTRDARIVLLDAASAVLPPFGDRLGS 228
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVKSLD 196
A +L K GV + G V DVD+ + + DG + VWS GV S L + L
Sbjct: 229 TAAERLEKIGVEVRLGAAVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASPLARQLA 288
Query: 197 LPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
GRI + E L VP +VF +GD + LP +AQVA + G+Y
Sbjct: 289 EQSGAELDRAGRIAVHEDLTVPGHPEVFVIGDM------MARDRLPGVAQVAIQGGRYA- 341
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+I GR +S + PF YR G+MATI R+ A+V + G+ LAG
Sbjct: 342 --AKQIAAGARGRDSSPDRV----PFQYRDKGAMATISRFHAVVKV------GGIELAGL 389
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+W++W + ++ VV +R+R ++W TFV
Sbjct: 390 LAWILWLAVHVVYVVGFRSRLSTLMSWTWTFV 421
>gi|118577016|ref|YP_876759.1| NADH dehydrogenase, FAD-containing subunit [Cenarchaeum symbiosum
A]
gi|118195537|gb|ABK78455.1| NADH dehydrogenase, FAD-containing subunit [Cenarchaeum symbiosum
A]
Length = 417
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 182/352 (51%), Gaps = 38/352 (10%)
Query: 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 73
T E I+YD LV+ALG++ + FG+ V++NA ++ + A +R +++ D+
Sbjct: 70 TREKRGISITYDFLVLALGSQTNFFGLSDVEKNAYTMKTLGDAVVLRNRVV------DML 123
Query: 74 GISEEE-----KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE 127
+E E + LL V+VGGG G+E +GE+ D ++ D R+ Y ++ KD V ++E
Sbjct: 124 EQAENETDPILRGTLLTFVIVGGGFAGIETAGEILDLLL-DARKHYPNIRKDDFSVVVLE 182
Query: 128 A-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI---LNDGTE--VPYGLL 180
A IL FD++L +A +L + G+ + +R V D ++ L+ G E + L
Sbjct: 183 ALGAILPGFDEKLAKFAHEKLLEKGMDIRLRTAVSGFDGTEVSFKGLDGGGEDAIRTNTL 242
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
VW+ GV P +K L K+ G+I +D +L VP VFAVGDC+ ++ P
Sbjct: 243 VWTAGVTPVNTIKR-SLFKTEKGKIVVDGFLAVPEFPGVFAVGDCALSVDPGSGRPFPPT 301
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQ+AE QG+ + L + + GG +A F ++ G MA IG+ +
Sbjct: 302 AQLAEAQGETVAHNLQALIRGGGMKA-----------FTFKQKGQMAVIGKRTGIASFL- 349
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G ++AGF +W +WR+ YL+++ R V ++W F RDI+R+
Sbjct: 350 -----GANIAGFWAWFLWRNVYLSKIPRMEKRIRVLLDWTIDLFFDRDIARM 396
>gi|384490289|gb|EIE81511.1| hypothetical protein RO3G_06216 [Rhizopus delemar RA 99-880]
Length = 391
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 139/240 (57%), Gaps = 17/240 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LV+ +GA STFG+ GV FL+E A++I +L+ + + +PG S EE
Sbjct: 108 VSYDYLVLGVGARNSTFGVQGVDRYGCFLKEAKDARKIHNRLMACVENAALPGQSPEEIK 167
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
RLLH V+VGGG TG+E++ EL DF++ D+R Y + D + ++L+EA +L F +L
Sbjct: 168 RLLHMVIVGGGATGIEYAAELHDFLIDDLRTWYPELADKVKISLVEALPSVLPQFSQKLI 227
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLIL---NDGTE-VPYGLLVWSTGVGPSTLVKSL 195
Y K + + + +VK+V ++L++ +D E +PYGLLVW+TG + LV L
Sbjct: 228 KYTEGNFRKQDITIHTKTMVKEVREKELVVKAPDDSIETIPYGLLVWATGNTTTPLVNDL 287
Query: 196 --DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
P++ + G +D+W+R+ +D++A GD + T QVA +QGKYL
Sbjct: 288 IQKFPETQTHKKGLVVDDWMRLKGCEDIYAFGDATA-------TRYAPTGQVASQQGKYL 340
>gi|161527520|ref|YP_001581346.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrosopumilus maritimus SCM1]
gi|160338821|gb|ABX11908.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nitrosopumilus maritimus SCM1]
Length = 451
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 180/351 (51%), Gaps = 45/351 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE-- 79
+ YD LV+ALG+E + FG++ +++NA ++ ++ A +R +++ D+ +E E
Sbjct: 105 LHYDFLVVALGSETNFFGMNDLEKNAYQMKTLNDAVMVRNRMI------DMLEQAENETN 158
Query: 80 ---KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSS 134
K LL VVVGGG G+E +GE+ D ++ DVR+ Y ++K + I V ++EA IL
Sbjct: 159 PILKHSLLTFVVVGGGFAGIETAGEIMDLLL-DVRKYYPNIKKEDIRVVVLEALPNILPG 217
Query: 135 FDDRLRHYATTQLSKSGVRLV-----------RGIVKDVDSQKLILNDG--TEVPYGLLV 181
F + L +A +L++ G+ + ++K +D K +D + + ++
Sbjct: 218 FSESLAKFAQEKLTEHGIEIKLQTAVTSFDGDEVMIKRLDVDKDASDDSVISSIQTKTVI 277
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
W+ GV P +K L K+ G+I +D+ L V VFA+GDC+ +++ + P A
Sbjct: 278 WTAGVTPVNTIKR-SLFKTDKGKIIVDKNLEVNDFPGVFAIGDCALFMDPNSQRPFPPTA 336
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
Q+AE Q K L+ + + E F Y G MA IG+ +
Sbjct: 337 QIAEAQAKIAAKNLHALIRN-----------EEKTEFTYESKGQMAIIGKRTGIASFL-- 383
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G+++ G +W +WR+ YL+++ +W RF V ++W +F RDISR+
Sbjct: 384 ----GMNIHGIFAWFLWRNIYLSKIPTWDKRFRVFLDWTADAIFDRDISRL 430
>gi|386874786|ref|ZP_10117012.1| pyridine nucleotide-disulfide oxidoreductase [Candidatus
Nitrosopumilus salaria BD31]
gi|386807409|gb|EIJ66802.1| pyridine nucleotide-disulfide oxidoreductase [Candidatus
Nitrosopumilus salaria BD31]
Length = 451
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 179/352 (50%), Gaps = 46/352 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE-- 79
I YD LV+ALG+E + FG+ V++NA ++ ++ A +R +++ D+ +E E
Sbjct: 104 IHYDFLVVALGSETNFFGMSDVEKNAYTMKTLNDAVVLRNRVI------DMLEQAENETD 157
Query: 80 ---KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSS 134
+ L+ VVVGGG G+E +GEL D ++ D R+ Y + K + V ++EA IL
Sbjct: 158 PILRKSFLNFVVVGGGFAGIETAGELMDLLL-DARKHYPTIQKKDLRVIVLEALGMILPG 216
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYG-------------LL 180
F+ +L +A ++ + G+ + ++ V D ++ P L
Sbjct: 217 FNQKLADFAKDKMVERGIDIRLKTAVTSFDGNEVTTKTIDPTPKDPIDDSFVDSIRTKTL 276
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
+W+ GV P +K + K+ G++ I+++L VP VFA+GDC+ +L+ + P
Sbjct: 277 IWTAGVTPVNTIKR-SMFKTDKGKLIINDFLEVPDFPGVFAIGDCALFLDPETQRPFPPT 335
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQ+AE Q K L + K NS K+ FVY G MA IG+ +
Sbjct: 336 AQIAEAQAKVAAKNLTALIK------NSEKE-----KFVYHSKGQMAIIGKRSGIATFL- 383
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G++++GF +WL+WR+ YL+++ ++ R V ++W F RDISR+
Sbjct: 384 -----GMNISGFWAWLIWRNVYLSKIATFDKRTRVFLDWTIDLFFDRDISRL 430
>gi|444319388|ref|XP_004180351.1| hypothetical protein TBLA_0D03320 [Tetrapisispora blattae CBS 6284]
gi|387513393|emb|CCH60832.1| hypothetical protein TBLA_0D03320 [Tetrapisispora blattae CBS 6284]
Length = 532
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 192/356 (53%), Gaps = 35/356 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV A+GAE +TFGI GV++ FL+E+ + ++R + NL ++++ + E+
Sbjct: 181 ELKYDYLVSAVGAEPNTFGIPGVEKYGNFLKEIPDSLKVRERFAANLEMANLLPKGDPER 240
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+++ + + + L+EA +L+ F+ +L
Sbjct: 241 KRLLSIVVVGGGPTGVETAGELQDYVHQDLQKFLPALAQEVQIHLVEALPSVLNMFEKKL 300
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLI----LNDG----TEVPYGLLVWSTGVGPST 190
YA + L S ++L ++ V V++ L+ L DG T +PYG L+W+TG
Sbjct: 301 SSYAQSVLEDSSMKLWLKTAVSKVEADHLVASTKLEDGTTKETTIPYGTLIWATGNKVRP 360
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
++ SL LP+ R G ++E+L+V ++VFA+GD + + LP AQVA +
Sbjct: 361 VISSLFKKLPEQKDARRGLIVNEFLQVNGTRNVFAIGDNAF-------SGLPPTAQVAHQ 413
Query: 247 QGKYLFSLLNRIGKAG--------GGRANSAKDMELGD-----PFVYRHLGSMATIGRYK 293
Q YL +RI G ++ EL PF Y H G++A +G K
Sbjct: 414 QADYLAQSFDRIAHLPEFQTELLEGSADSTTTATELFKKNSFRPFKYHHQGALAYLGAEK 473
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
A+ ++ +S + G ++ +WR YL ++S R+RF V +W F RD
Sbjct: 474 AIANIVLGGKSI-YTGGGAFTFYIWRVTYLAMILSARSRFKVITDWLKLSFFKRDF 528
>gi|254580605|ref|XP_002496288.1| ZYRO0C14960p [Zygosaccharomyces rouxii]
gi|238939179|emb|CAR27355.1| ZYRO0C14960p [Zygosaccharomyces rouxii]
Length = 507
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 190/353 (53%), Gaps = 33/353 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV A+GAE +TFG+ GV++ FL+E+ H+ ++R K NL +++ + E+
Sbjct: 160 EIKYDYLVTAVGAEPNTFGVPGVEKYGHFLKEIDHSLQVRAKFAQNLEKANLLPKGDPER 219
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+++ ++ + + + L+EA +L+ F+ +L
Sbjct: 220 KRLLSIVVVGGGPTGVETAGELQDYVSQDLKKFLPNLAEEVQIHLVEALPVVLNMFEKKL 279
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPST 190
YA L + ++L +R V V+ LI DGT +PYG L+W+TG
Sbjct: 280 SSYARDVLQGTSIKLHLRSAVSQVEPDHLIAKTKHEDGTVTEANIPYGTLIWATGNKARP 339
Query: 191 LVKSLDLPKSPGGR-----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
++ L K P + ++ +L+V +++FA+GD + LP AQVA
Sbjct: 340 IITDL-FKKIPEQNQCTKALSVNPFLQVKGSKNIFAIGD-------NAFSGLPPTAQVAH 391
Query: 246 RQGKYLFSLLNRIGKAGG-----GRANSAKDMELG----DPFVYRHLGSMATIGRYKALV 296
+Q +YL + +++ G+A D+ PF Y H G++A +G KA+
Sbjct: 392 QQAEYLAKVFDKMANLPNFHEELGQATEKFDLLFERSSFKPFSYIHYGALAYLGAEKAIA 451
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
++ K S + G +++ +WR YL+ ++S R+R+ V +W F RD
Sbjct: 452 NITYGKRS-FYTGGGVMTFYIWRLLYLSMIMSARSRYKVIADWIKLAFFKRDF 503
>gi|408377227|ref|ZP_11174830.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Agrobacterium albertimagni AOL15]
gi|407749186|gb|EKF60699.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Agrobacterium albertimagni AOL15]
Length = 427
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 171/324 (52%), Gaps = 28/324 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD+LV+A G++ + FG +++A L+ +H A++IR +LLL ++ E E+
Sbjct: 103 IPYDRLVLATGSKYNYFGNEDWQKHAPGLKSIHEARQIRHRLLLAFEQAER-SQDEAEQR 161
Query: 82 RLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFD 136
RLL VV+GGGPTGVE +G +S+ I RD R + + +HV L+EA IL++F
Sbjct: 162 RLLTSVVIGGGPTGVEMAGAISELGRFMIERDFR---TLRPEQLHVVLVEAGPRILATFP 218
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L +YA L GV + + V+DV ++ + + DG +P +VW GV S L
Sbjct: 219 ENLSNYAADYLRNIGVDIRLNTPVEDVTAEGVQVKDGF-LPASCIVWGAGVKASPAADWL 277
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ PGGR+ + L V ++ V+A+GD + L+ G+ LPALAQVA++QG +L L
Sbjct: 278 GISPGPGGRLPVARDLSVDGLEGVYAIGDTALALDEDGEA-LPALAQVAKQQGTFLGKAL 336
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
G N F + + G+ A IGR A+ D L G +W
Sbjct: 337 KSSLLKGAAVPN----------FRFHNRGNTAVIGRNAAIFDF------GTWQLKGRFAW 380
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNW 339
L+W ++ +V++ R V+V W
Sbjct: 381 LLWAIVHVYLLVNFEKRLLVSVQW 404
>gi|238498176|ref|XP_002380323.1| alternative NADH-dehydrogenase [Aspergillus flavus NRRL3357]
gi|220693597|gb|EED49942.1| alternative NADH-dehydrogenase [Aspergillus flavus NRRL3357]
Length = 556
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 189/352 (53%), Gaps = 54/352 (15%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GAE +TFGI GVKE++ FL+EV AQ+IR +++ + + +E+E
Sbjct: 213 EVPFDMLVVGVGAENATFGIKGVKEHSCFLKEVGDAQKIRTRIMDCVETAIFKDQTEDEI 272
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GE+ DF D+++ +K+ VTL+EA +L F +L
Sbjct: 273 KRLLHMVVVGGGPTGVEFAGEIQDFFEEDLKKWVPEIKENFKVTLVEALPNVLPMFSKQL 332
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGVGPST 190
Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 333 IDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGNAVRP 392
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L LP R G ++E+L V ++V+AVGDC+ T AQVA +
Sbjct: 393 VVRDLMSQLPAQKNSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTAQVASQ 445
Query: 247 QGKYLFSLLNRIGKA------------GGGRANSAKD------------------MELGD 276
+G +L L N + K +A S ++ ++G
Sbjct: 446 EGAFLARLFNTMAKTEAIENDLKQLSEAQAQAKSPEERNQIFDEIRERQKQLRRTKQIG- 504
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 328
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S
Sbjct: 505 PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFS 554
>gi|258545964|ref|ZP_05706198.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Cardiobacterium hominis ATCC 15826]
gi|258518769|gb|EEV87628.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Cardiobacterium hominis ATCC 15826]
Length = 418
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 165/328 (50%), Gaps = 29/328 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD L+IALGA+ + FG V++NA ++ + A IR +L L + E ++
Sbjct: 95 VAYDMLIIALGAQPNYFGNREVEQNAYTMKTLGDALAIRNNILAQLEAACAQ--PREARA 152
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR-YSHVK-DYIHVTLIEANEIL-SSFDDR 138
LH VV GGG +GVE +G L++ + RD+ + Y ++ ++ +TL+ A+ +L +
Sbjct: 153 PYLHLVVAGGGASGVELTGILAE-MRRDIFDKDYPELEGEHGQLTLVTADPVLLPPMREV 211
Query: 139 LRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+ Y L K GV ++ V D Q + L GT + L+W+ GV L D
Sbjct: 212 SQRYTAAALQKLGVDIIYNDPVTAYDGQTITLKSGTTIAAKSLIWTAGVTAVKLAGIADS 271
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL-ESTGKTVLPALAQVAERQGKYLFSLLN 256
G R+ +D LRV + DV+A+GDC+ +S P L QVA+ QGKYL L
Sbjct: 272 SYGRGNRLRVDRQLRVIGLDDVYAIGDCAIVEGDSAYPNGHPQLGQVAKAQGKYLGKALG 331
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R KA FVY+H G MA IGR A+ D+ G SL G ++W
Sbjct: 332 RSDKA----------------FVYKHRGDMAMIGRLSAVADM-----PGGRSLQGMIAWF 370
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+W ++ +V+++NR NW+ F+
Sbjct: 371 IWVVVHILALVTFKNRIAATYNWSIAFL 398
>gi|269925710|ref|YP_003322333.1| NADH dehydrogenase (ubiquinone) [Thermobaculum terrenum ATCC
BAA-798]
gi|269789370|gb|ACZ41511.1| NADH dehydrogenase (ubiquinone) [Thermobaculum terrenum ATCC
BAA-798]
Length = 459
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 175/334 (52%), Gaps = 21/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+ALGA + FG+ +EN+ L+ + E+R ++ ++V E +
Sbjct: 130 IYYDYLVVALGATNNFFGLASAEENSFTLKTISDGIELRNHIIDAFERAEVEQ-DPEVRR 188
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFDDRL 139
RLL V+VG GPTGVE + L D + + Y + + V L+EA + IL + DD+L
Sbjct: 189 RLLTFVIVGAGPTGVELAASLRDLASHVLLKEYPGIDPGEVRVVLVEALDRILLALDDQL 248
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
R A L GV L+ V DV+ + + DG+ +P +VW+ GV + LV L
Sbjct: 249 RQNAMKTLQSKGVEVLLNTPVADVEKGGVRIKDGSFIPSETVVWTAGVKANPLVADLPGE 308
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
K GR+ +++++++P +++ +GDC+ Y + LP A VA GK + +N I
Sbjct: 309 KGRDGRVRVNDFMQLPDHPEIYVIGDCAMYFMPGEQRPLPPNAPVAIAGGKT--AAINII 366
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
++ K+ L +P Y++ G + ++G+ A+ ++ G+ +GF+ WLVW
Sbjct: 367 --------HTLKNEPL-EPLKYKYQGELVSLGKNNAVANI------MGIKFSGFIGWLVW 411
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
R+ YL ++ ++N+ V V+W R+ S++
Sbjct: 412 RAVYLYKLEGFKNKASVLVDWLFGVFDRRETSKL 445
>gi|440800833|gb|ELR21867.1| NADH dehydrogenase, extrinsic, putative [Acanthamoeba castellanii
str. Neff]
Length = 480
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 44/291 (15%)
Query: 91 GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSK 149
GGPTGVE + EL DF+ +V + + ++ ++ +TL+E + ILS++D ++ Y T+
Sbjct: 203 GGPTGVEAAAELRDFVQSNVHKWFPKLEPHVSITLVELMDHILSTYDAKISTYTTSHFKN 262
Query: 150 SGV------RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL--DLPKSP 201
+ + R+V DV Q+ + +PYGL +WSTG+G S L+ + LP+
Sbjct: 263 TNIDIRTKSRVVAVKPGDVIIQRTDTKETQHIPYGLCIWSTGIGTSPLINKIREKLPQDI 322
Query: 202 GGR---IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE------------- 245
+ D++LRV ++A+GDC+ + L L + A+
Sbjct: 323 QTNRRALLTDQFLRVKGADGIYALGDCATIAQEAMLGKLNDLFKEADLNKDNHLQIEEFR 382
Query: 246 -----RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
++G+YL LLNR+ K +EL F Y+HLGS IG A+ +
Sbjct: 383 SLIDNQEGQYLGKLLNRVAN---------KSVELDTGFHYKHLGSFCFIGSEHAVAEF-- 431
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
++GL L GF +W +WRS YL++ S RN+ YV VNW T++FGRDI+R
Sbjct: 432 ---AEGLVLEGFGAWWLWRSVYLSKQYSLRNKLYVGVNWLKTWIFGRDITR 479
>gi|189423289|ref|YP_001950466.1| NADH dehydrogenase (ubiquinone) [Geobacter lovleyi SZ]
gi|189419548|gb|ACD93946.1| NADH dehydrogenase (ubiquinone) [Geobacter lovleyi SZ]
Length = 405
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 169/330 (51%), Gaps = 29/330 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL---MLSDVPGISEE 78
I YD LVI G+ + FG+ V+ N+ L+E+ A+ +R +L +L P
Sbjct: 85 IPYDYLVIGAGSVTNFFGLESVERNSFDLKELADAETLRNHILTAFERAVLEPDPA---- 140
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSFD 136
K L+ V+VGGGPTGVEF+G L + + + + Y + + V L+EA +++L+S
Sbjct: 141 RKRALMTFVIVGGGPTGVEFAGALIELVHFVLAKDYPELSTHAARVVLVEATDKLLASMP 200
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ R Y +L V L+ V D +++ L+DG +P L WS GV + + +
Sbjct: 201 AKQRTYTLKKLRSMSVEVLLNARVVDAGPERVTLHDGAIIPAHTLFWSAGVKAAPIAAVI 260
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
D+P GGRI ++ L +P +VF +GD + YLE G + LP A VA + G Y
Sbjct: 261 DVPHRAGGRIPVESDLTIPGHPEVFVIGDMA-YLEQEG-SALPMTAPVAMQMGIY----- 313
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
+GKA + ++ PF Y GSMATIG+ A+ + G+ G+++W
Sbjct: 314 --VGKAILAKERNSST----PPFRYCDKGSMATIGKNAAVAS------AFGMDFRGYMAW 361
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
LVW +L ++ +RNR V +NW + F
Sbjct: 362 LVWLLLHLYYLIGFRNRIVVMLNWVWYYWF 391
>gi|401840811|gb|EJT43479.1| NDI1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 513
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 194/361 (53%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + K YD L+ A+GAE +TFGI GV ++ FL+E+ ++ EIRR NL ++
Sbjct: 159 LHQAEPAEIK--YDYLISAVGAEPNTFGIPGVTDHGHFLKEIPNSLEIRRTFAANLEKAN 216
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 217 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 276
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 277 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKVTEETIPYGTLI 336
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++ +L+V +VFA+GD + L
Sbjct: 337 WATGNKARPVITDLFKKIPEQNSSKRGLAVNSFLQVKGSNNVFAIGDNAF-------AGL 389
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + N + + D PF Y LG++A
Sbjct: 390 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSARKDKIDLLFEENNFRPFKYNDLGALAY 449
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+RF V +W F RD
Sbjct: 450 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRFKVFFDWIKLAFFKRD 508
Query: 349 I 349
Sbjct: 509 F 509
>gi|111024223|ref|YP_707195.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|110823753|gb|ABG99037.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
Length = 463
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 175/335 (52%), Gaps = 34/335 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA+ S FG E+A ++ + A E+R ++L ++V E++RL
Sbjct: 108 YDSLIVSAGAQQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFEQAEVT-TDPRERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F D L
Sbjct: 167 LTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPFGDNLGS 226
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPSTLVKSL- 195
A L K GV + G V DVD+ L + D GTE + VWS GV S L + L
Sbjct: 227 EAAETLEKLGVEVRLGASVTDVDADGLTVRDADGTEHRIESVCKVWSAGVAASPLGRRLA 286
Query: 196 -----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA + G+Y
Sbjct: 287 EQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVAIQGGRY 338
Query: 251 LF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+ + A GR ++ PF YR G+MATI R++A+ + GL L
Sbjct: 339 AAKQIAAEVCAAAKGRPVPERN-----PFRYRDKGAMATICRFRAVAKI------GGLEL 387
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 388 TGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|397737806|ref|ZP_10504471.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
gi|396926538|gb|EJI93782.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
Length = 463
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 175/335 (52%), Gaps = 34/335 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA+ S FG E+A ++ + A E+R ++L ++V E++RL
Sbjct: 108 YDSLIVSAGAQQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFEQAEVI-TDPRERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F D L
Sbjct: 167 LTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPFGDNLGS 226
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPSTLVKSL- 195
A L K GV + G V DVD+ L + D GTE + VWS GV S L + L
Sbjct: 227 EAAETLEKLGVEVRLGASVTDVDADGLTVRDADGTEHRIESVCKVWSAGVAASPLGRRLA 286
Query: 196 -----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA + G+Y
Sbjct: 287 EQSGADIDRA--GRVSVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVAIQGGRY 338
Query: 251 LF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+ + AG GR ++ PF YR G+MATI R+ A+ + GL L
Sbjct: 339 AAKQIAAEVCAAGKGRPVPDRN-----PFRYRDKGAMATICRFNAVAKI------GGLEL 387
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 388 TGFLAWIMWLAVHVVYVVGFRSRLVTLLSWAWTFL 422
>gi|359688185|ref|ZP_09258186.1| NADH dehydrogenase [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418747801|ref|ZP_13304096.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira licerasiae
str. MMD4847]
gi|418758010|ref|ZP_13314194.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|384114717|gb|EIE00978.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|404276651|gb|EJZ43962.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira licerasiae
str. MMD4847]
Length = 428
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 177/332 (53%), Gaps = 23/332 (6%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A GA++S FG K+ + L+ + A IR K+L + +++ G E K +
Sbjct: 101 YDYLILAAGAKSSYFGNDHWKKYSIGLKSLKDALSIRTKILTSFEQAELAGDPELAK-KH 159
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLRH 141
L+ V++GGGPTGVE +G +++ VR + + + +TLIEA+ +L++F +L
Sbjct: 160 LNYVIIGGGPTGVELAGSIAELSHEIVRNEFHTIDPALAKITLIEASPRLLAAFAPKLSE 219
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 200
+A +L K GV ++ G V ++D Q + +G +P ++W+ GV +++ SL +P
Sbjct: 220 FAKVRLEKRGVEVLTGTKVLEID-QNGVKIEGRTIPSSTVIWAAGVQANSIGASLGVPTD 278
Query: 201 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260
GR+ +DE+ V +VF +GD + Y + K LP ++ VA +QG+Y+ SL+
Sbjct: 279 RAGRVMVDEFCNVEGHPEVFVIGDIANYSKGMEKP-LPGVSPVAMQQGRYVASLIR---- 333
Query: 261 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 320
G S K PF Y GSMATIGR A+ + L GF W+VW
Sbjct: 334 ---GDLKSKKR----KPFRYLDKGSMATIGRQDAVAQV------GNFRLRGFFGWVVWLF 380
Query: 321 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++ V ++N+ + + W +++ R +R+
Sbjct: 381 IHIFYQVGFKNKISIFITWVWSYITFRAEARL 412
>gi|384106164|ref|ZP_10007074.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|383834355|gb|EID73797.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
Length = 463
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 175/335 (52%), Gaps = 34/335 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA+ S FG E+A ++ + A E+R ++L ++V +E++RL
Sbjct: 108 YDSLIVSAGAQQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFEQAEVT-TDPQERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F D L
Sbjct: 167 LTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPFGDNLGS 226
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPSTLVKSL- 195
A L K GV + G V DVD+ L + D GTE + VWS GV S L + L
Sbjct: 227 EAAETLEKLGVEVRLGASVTDVDAGGLTVRDADGTEHRIESVCKVWSAGVAASPLGRRLA 286
Query: 196 -----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA + G+Y
Sbjct: 287 EQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVAIQGGRY 338
Query: 251 LF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+ + A GR + PF YR GSMATI R+ A+ ++ GL +
Sbjct: 339 AAKQIAAEVTAAAKGRPAPERT-----PFRYRDKGSMATICRFNAVAEI------GGLEV 387
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 388 TGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|419962368|ref|ZP_14478361.1| NADH dehydrogenase [Rhodococcus opacus M213]
gi|414572315|gb|EKT83015.1| NADH dehydrogenase [Rhodococcus opacus M213]
Length = 463
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 175/335 (52%), Gaps = 34/335 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA+ S FG E+A ++ + A E+R ++L ++V +E++RL
Sbjct: 108 YDSLIVSAGAQQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFEQAEVT-TDPQERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F D L
Sbjct: 167 LTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPFGDNLGS 226
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPSTLVKSL- 195
A L K GV + G V DVD+ L + D GTE + VWS GV S L + L
Sbjct: 227 EAAETLEKLGVEVRLGASVTDVDAGGLTVRDADGTEHRIESVCKVWSAGVAASPLGRRLA 286
Query: 196 -----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA + G+Y
Sbjct: 287 EQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVAIQGGRY 338
Query: 251 LF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+ + A GR + PF YR GSMATI R+ A+ ++ GL +
Sbjct: 339 AAKQIAAEVTAAAKGRPAPERT-----PFRYRDKGSMATICRFNAVAEI------GGLEV 387
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 388 TGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|365759194|gb|EHN00998.1| Ndi1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 194/361 (53%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + K YD L+ A+GAE +TFGI GV ++ FL+E+ ++ EIRR NL ++
Sbjct: 159 LHQAEPAEIK--YDYLISAVGAEPNTFGIPGVTDHGHFLKEIPNSLEIRRTFAANLEKAN 216
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 217 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 276
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 277 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKVTEETIPYGTLI 336
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++ +L+V +VFA+GD + L
Sbjct: 337 WATGNKARPVITDLFKKIPEQNSSKRGLAVNSFLQVKGSNNVFAIGDNAF-------AGL 389
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + N + + D PF Y LG++A
Sbjct: 390 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSARKDKIDLLFEENNFRPFKYNDLGALAY 449
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+RF V +W F RD
Sbjct: 450 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRFKVFFDWIKLAFFKRD 508
Query: 349 I 349
Sbjct: 509 F 509
>gi|404497889|ref|YP_006721995.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter metallireducens GS-15]
gi|418066970|ref|ZP_12704324.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacter metallireducens RCH3]
gi|78195489|gb|ABB33256.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter metallireducens GS-15]
gi|373559541|gb|EHP85834.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacter metallireducens RCH3]
Length = 413
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 169/335 (50%), Gaps = 37/335 (11%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+I G+ + FG+ V+ +A L+E+ + +R +L + V + +
Sbjct: 92 RIPYDYLIIGAGSVTNYFGLESVERHAFDLKELVDGERLRNHILTAFERAVVEPDPAKRR 151
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NEIL 132
+ L+ V+VGGGPTGVEF+G L + + RY KDY V L+EA + +L
Sbjct: 152 A-LMTFVIVGGGPTGVEFAGALMELV------RYVLAKDYPELSVQAARVVLVEAFDRLL 204
Query: 133 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
++ L+ Y +L GV L V D + +++IL+DG +P L WS GV + L
Sbjct: 205 AAMPQELQVYTLEKLRAMGVEVLFNARVVDAEPERVILHDGAIIPAHTLFWSAGVKAAPL 264
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+L + PGGRI ++ L + +V+ +GD + +LE G LP +A VA + G Y
Sbjct: 265 AATLGVTPKPGGRIPVEPDLTLAGHPEVYVIGDMA-HLEQDGAA-LPMVAPVAMQMGTY- 321
Query: 252 FSLLNRIGKAGGGRANSAKDM-ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
G A A++ E PF YR GSMATIGR A+ + G+
Sbjct: 322 -----------AGEAIVAREKGETPKPFRYRDRGSMATIGRSAAVAC------AFGMKFR 364
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
GF +WLVW +L ++ +RNR V +NW + F
Sbjct: 365 GFSAWLVWLLLHLYYLIGFRNRIVVMLNWIWYYWF 399
>gi|432334382|ref|ZP_19586067.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430778704|gb|ELB93942.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 463
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 175/335 (52%), Gaps = 34/335 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA+ S FG E+A ++ + A E+R ++L ++V +E++RL
Sbjct: 108 YDSLIVSAGAQQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFEQAEVT-TDPQERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F D L
Sbjct: 167 LTFVVVGAGPTGVEMAGQIAELAYRTLVGAYSNFDPRDARIVLLDAASAVLPPFGDNLGS 226
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPSTLVKSL- 195
A L K GV + G V DVD+ L + D GTE + VWS GV S L + L
Sbjct: 227 EAAETLEKLGVEVRLGASVTDVDAGGLTVRDADGTEHRIESVCKVWSAGVAASPLGRRLA 286
Query: 196 -----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA + G+Y
Sbjct: 287 EQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVAIQGGRY 338
Query: 251 LF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+ + A GR + PF YR GSMATI R+ A+ ++ GL +
Sbjct: 339 AAKQIAAEVTAAAKGRPVPERT-----PFRYRDKGSMATICRFNAVAEI------GGLEV 387
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 388 TGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|358383134|gb|EHK20802.1| hypothetical protein TRIVIDRAFT_223500 [Trichoderma virens Gv29-8]
Length = 394
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 175/356 (49%), Gaps = 60/356 (16%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
C+ D+L+ +F ++YDK+++ G ++TFGI GV ENA F++ V +A +R +L
Sbjct: 89 CQPAFDQLKDE---RFTVNYDKVILTPGCRSNTFGIPGVSENAIFVKNVANANMVRSRLN 145
Query: 65 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 124
L ++ +PG S++ + +LLH +VGGGPTG+E + EL+D D
Sbjct: 146 EILEMASLPGTSKDRQRQLLHVAIVGGGPTGIEVAAELTDLFDGD--------------- 190
Query: 125 LIEANEILSSFDDRLRHYATTQLS--KSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVW 182
IL+ FD +L YAT+ L+ K ++ I+K V + + YG+L+W
Sbjct: 191 ------ILAPFDQKLAEYATSALTTGKVNIKTNTHILK-VTPDTIETKEEGATGYGMLIW 243
Query: 183 STGVGPSTLVKSLDLPKSPGG--RIGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKT 235
+TG LV +L++ K+ G RI D+ L + +Q+VFA+GD + + T
Sbjct: 244 ATGNKSIPLVDNLNVRKTEQGLRRILTDDHLNTFAPDGSIMQNVFAMGDAADIEDGT--- 300
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
LP A+VA ++ Y+ +LN+ KA PF Y+ + GR+ +
Sbjct: 301 -LPTTAEVAIQKADYIIKVLNQNYKA---------------PFEYKQRSLVTYTGRWDGV 344
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
V ++ G+ +WL WRS SWR + + W ++ GR+I R
Sbjct: 345 VQGKR-------EYTGYGAWLSWRSGNFFWTRSWRRKILMGYAWFMDWLDGREIIR 393
>gi|424856608|ref|ZP_18280816.1| NADH dehydrogenase [Rhodococcus opacus PD630]
gi|356662743|gb|EHI42922.1| NADH dehydrogenase [Rhodococcus opacus PD630]
Length = 463
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 174/335 (51%), Gaps = 34/335 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA+ S FG E+A ++ + A E+R ++L ++V +E++RL
Sbjct: 108 YDSLIVSAGAQQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFEQAEVT-TDPQERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F D L
Sbjct: 167 LTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPFGDNLGS 226
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPSTLVKSL- 195
A L K GV + G V DVD+ L + D GTE + VWS GV S L + L
Sbjct: 227 EAAETLEKLGVEVRLGASVTDVDAGGLTIRDADGTEHRIESVCKVWSAGVAASPLGRRLA 286
Query: 196 -----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA + G+Y
Sbjct: 287 EQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVAIQGGRY 338
Query: 251 LF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+ + A GR + PF YR GSMATI R+ A+ + GL L
Sbjct: 339 AAKQIAAEVTAAAKGRPVPERI-----PFRYRDKGSMATISRFHAVAKI------GGLEL 387
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 388 TGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|385810344|ref|YP_005846740.1| NADH dehydrogenase [Ignavibacterium album JCM 16511]
gi|383802392|gb|AFH49472.1| NADH dehydrogenase [Ignavibacterium album JCM 16511]
Length = 411
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 178/335 (53%), Gaps = 23/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D L++A+GA S FG + ++ A L+ + A IR K++ L L++ + E
Sbjct: 93 QLEFDYLIVAVGARHSYFGKNEWEQLAPGLKTLTDALVIREKIIEALELAE-KETNHELM 151
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
+ L V+VGGGPTGVE +G +++ + + Y + + + V LIEA + ILSSFD +
Sbjct: 152 KKYLTFVIVGGGPTGVELAGAIAEIAKETMIKDYKNFRPEDTKVFLIEAMDRILSSFDKK 211
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
L A L GV + + SQ + + +P ++W+ G S L+KSL++
Sbjct: 212 LSEQAKEDLMNMGVEVKLNAKVENISQDGVHTNQEFIPSKTIIWAAGNQASPLLKSLNVE 271
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL-NR 257
GR+ + + +P ++F +GD + + E G VLP +AQVA +QGK++ ++ N+
Sbjct: 272 TDRAGRVIVKKDCSIPGNPEIFLIGDAAHFEEENG-NVLPGVAQVAIQQGKFVAEVIKNQ 330
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
I E F Y+ G+MATIG+ KA+ ++ KGL L+G ++WL
Sbjct: 331 IPP------------ERRPSFRYKDKGTMATIGKAKAVAEI------KGLKLSGVIAWLA 372
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ ++ +RNRF V + W ++ R +R+
Sbjct: 373 WSIVHIFFLIGFRNRFRVMIEWIWYYITKRHGTRL 407
>gi|39995601|ref|NP_951552.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter sulfurreducens PCA]
gi|409911058|ref|YP_006889523.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter sulfurreducens KN400]
gi|39982364|gb|AAR33825.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter sulfurreducens PCA]
gi|298504621|gb|ADI83344.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter sulfurreducens KN400]
Length = 419
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 171/333 (51%), Gaps = 35/333 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LVI G+ + FG+ V+++A L+E+ A+ +R +L + V + ++
Sbjct: 93 IPYDYLVIGAGSVTNYFGLKSVEQHAFDLKELVDAERLRNHILTAFERAVVEPDPAKRRA 152
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NEILS 133
L+ V+VGGGPTGVEF+G L + + RY KDY V L+EA + +L+
Sbjct: 153 -LMTFVIVGGGPTGVEFAGALIELV------RYVLTKDYPELSVQAARVVLVEAFDRLLA 205
Query: 134 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
+ L+ Y +L GV L+ V D +++ L+DG +P L WS GV + L
Sbjct: 206 AMPAELQGYTLEKLRGMGVEVLLNARVVDAGPERVTLHDGAVIPAHTLFWSAGVKAAPLA 265
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
+L + ++PGGRI ++ L +P DV+ VGD + +LE G LP +A VA + G +
Sbjct: 266 ATLGVEQNPGGRIAVEPDLTLPGHPDVYVVGDMA-WLEQDGAP-LPMVAPVAMQMGIH-- 321
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
GK+ R A PF Y GSMATIGR A+ + G++L G+
Sbjct: 322 -----AGKSILAREQGAP----APPFRYHDKGSMATIGRSAAVAS------AFGMNLRGY 366
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+W+ W +L ++ +RNR V +NW + F
Sbjct: 367 AAWIAWLLLHLYYLIGFRNRIVVMLNWIWYYWF 399
>gi|408793720|ref|ZP_11205326.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408462224|gb|EKJ85953.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 423
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 175/333 (52%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD LV+A GA S FG + KE L+ + A IRR++LL+ +++ G E+ KS
Sbjct: 99 TYDYLVLATGARTSYFGNNNWKEKTLGLKNLKDALAIRRRILLSFEQAELIGNYEKAKS- 157
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRLR 140
+H V++GGGPTGVE +G +++ +R+ + ++ VTLIEA +L++F+++
Sbjct: 158 FMHYVIIGGGPTGVELAGSIAELSHNIIRKDFRNIDSGMTKVTLIEAGPRLLTAFNEKSS 217
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV L V ++ ++L D T + ++W+ GV S L K+L + K
Sbjct: 218 QFTKEKLESRGVEVLTNSPVLEITDTGVVLKDRT-IESKTVIWAAGVEGSELAKNLPINK 276
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
RI +DE+ R +VF +GD + Y + LP ++ VA +QG+Y+ +++ +
Sbjct: 277 DKANRIIVDEYCRTFEFPEVFVIGDAANYSSGLSRP-LPGVSPVAMQQGRYVAKVIDSVE 335
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
K K + PF Y G+MATIGR A+ + + + L G L WL W
Sbjct: 336 K--------KKSI---TPFHYFDKGNMATIGRTDAVAEFGK------IRLKGILGWLGWL 378
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ ++W +++ R SR+
Sbjct: 379 FVHLVYQVGFKNKVSTLLSWVWSYLTFRAGSRL 411
>gi|255658997|ref|ZP_05404406.1| NADH dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260848957|gb|EEX68964.1| NADH dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 421
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 168/336 (50%), Gaps = 22/336 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I+YD L++A GA + FG+ V+ ++ ++ + A IR +L ++ E +
Sbjct: 98 EIAYDYLILAAGATTNYFGMQEVEAHSYGMKTLQEALHIRNHVL-HMFERANKETDPEVR 156
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEAN-EILSSFDD 137
R+L VVVGGGPTG+E SG L++ ++Q+ H D+ + V LIEA +L
Sbjct: 157 RRMLTFVVVGGGPTGIEESGALTELF--GIQQKEFHNLDFSEVSVKLIEATANVLPMVAP 214
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
LR +A L K GV ++ V D L L DGT +P ++W+ GV +K
Sbjct: 215 NLREHAVKVLRKKGVDVMLNTQVVGYDGNDLKLKDGTTIPTQTVIWAAGVKAVPFIKDCG 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GGRI ++E L+V VFA+GDC+ Y T + LP +A VA +Q + + +
Sbjct: 275 GEVDRGGRIIVNEKLQVEGSDCVFAIGDCAHYQHGTERP-LPTVAPVAMQQAQ---TAHD 330
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
I K G+ + A F Y+ LG+MATIGR +A+VD K + GF++W
Sbjct: 331 NIMKLIQGQQDLAT-------FHYKDLGAMATIGRGEAVVD----KTKINPQMTGFIAWC 379
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W +L R+ F VA+ W G + RI
Sbjct: 380 AWMFVHLLRLAGAHANFTVAIKWTWNLFSGTRLGRI 415
>gi|452845067|gb|EME47000.1| hypothetical protein DOTSEDRAFT_85608 [Dothistroma septosporum
NZE10]
Length = 438
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 38/362 (10%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
C + D E +F + YD+LV+A G ++TF G ++A F++ V+ A+ ++ +L
Sbjct: 101 CRSTCDIDGVTENTQFNVRYDRLVLAPGCVSNTFHTPGADDHAFFVKNVNDAKRVQFRLK 160
Query: 65 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 124
L L+ +P S+E++ LLH +VVGGGPTGVE S E+SD D+ + Y + + +T
Sbjct: 161 QLLELASLPNTSDEKQRELLHIIVVGGGPTGVEISAEMSDLFNDDMSKLYPLLAGKMTIT 220
Query: 125 LIEANE-ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVW 182
+ +A IL +F+ LR +A + SK GV + +K V++ + + G+++W
Sbjct: 221 IHDAAPFILGAFEKALREHAISSFSKRGVNVKPDSKIKKVEADSITTEADGRIGCGMVLW 280
Query: 183 STGVGPSTLVKSLDLPKSPG-GRIGIDEWLRV-----------PSVQDVFAVGDCSGYLE 230
+ G LV LD+ K+ RI D+ L V + DV+A+GD +
Sbjct: 281 TAGNKQCPLVDKLDVCKTDKVPRILTDQHLHVLRASGPYDEDKTPLPDVYALGDAA---- 336
Query: 231 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIG 290
K LP A+VA ++ +YL S+LN K GR F Y+ +A IG
Sbjct: 337 DIKKYFLPTTAEVAVQKAEYLASVLN---KGTDGRK----------VFEYKQKALVAYIG 383
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+ +V R + G +W WRS L SWR + + + W ++ G++I+
Sbjct: 384 GHDGVVAGRPD-------WNGARAWTAWRSKNLLWTRSWRRKIMIMIYWGLDWMGGKEIA 436
Query: 351 RI 352
R+
Sbjct: 437 RL 438
>gi|296815778|ref|XP_002848226.1| alternative NADH-dehydrogenase [Arthroderma otae CBS 113480]
gi|238841251|gb|EEQ30913.1| alternative NADH-dehydrogenase [Arthroderma otae CBS 113480]
Length = 586
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 190/374 (50%), Gaps = 65/374 (17%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ +D LV+ +GA+ +TF EV AQ+IR +++ + + +++E
Sbjct: 234 QVPFDLLVVGVGAQNATF-------------EVGDAQKIRTRIMDCVETAIFKDQTQDEI 280
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRL 139
RLLH VVVGGGPTGVEF+GEL DF D+R+ +KD HVTL+EA +L F +L
Sbjct: 281 KRLLHMVVVGGGPTGVEFAGELQDFFNEDLRKWIPDIKDSFHVTLVEALPNVLPMFSKQL 340
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPST 190
Y + + + + G +VK V + ++ DG+ ++PYGLLVW+TG
Sbjct: 341 IDYTESTFKEEAITIRTGTMVKSVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATGNAVRD 400
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
+V+ L +P R G ++E+L V ++++AVGDC+ T AQVA +
Sbjct: 401 VVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTAQVASQ 453
Query: 247 QGKYLFSLLNRIGKAGG----------GRANSAKDMELGD-------------------P 277
+G +L L N + K ++ + D + P
Sbjct: 454 EGAFLARLFNTMAKTDNIEKELSQLSVAQSEAKDDTDRNKVLDEIRALQQQLRRTRQVGP 513
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 337
F Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR V V
Sbjct: 514 FQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVVV 571
Query: 338 NWATTFVFGRDISR 351
+W +FGRD+SR
Sbjct: 572 DWLKAKLFGRDVSR 585
>gi|297799920|ref|XP_002867844.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297313680|gb|EFH44103.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 549
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 136/216 (62%), Gaps = 8/216 (3%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR ++ + +PG++EE
Sbjct: 125 EFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKVSLPGLNEE 184
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y K+ + +TL+E A+ IL+ FD
Sbjct: 185 ERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPKAKNLVQITLLEAADHILTMFDK 244
Query: 138 RLRHYATTQLSKSG--VRLVRGIVKDVDSQKLILNDGTEV---PYGLLVWSTGVGPSTLV 192
R+ +A + ++ G V+L +VK D + G EV PYG++VWSTG+G ++
Sbjct: 245 RITEFAEEKFTRDGIDVKLGSMVVKVNDKEISAKTKGGEVSTIPYGMIVWSTGIGTRPVI 304
Query: 193 KSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
K G R + DEWLRV +++A+GDC+
Sbjct: 305 KDFMKQIGQGNRRALATDEWLRVEGCDNIYALGDCA 340
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGR 291
+LPA QVA +QG YL +R+ + G PF YRHLG A +G
Sbjct: 434 LLPATGQVAAQQGTYLAKCFDRMEVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGG 493
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD SR
Sbjct: 494 EQTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSR 548
Query: 352 I 352
I
Sbjct: 549 I 549
>gi|433615682|ref|YP_007192477.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium meliloti
GR4]
gi|429553929|gb|AGA08878.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium meliloti
GR4]
Length = 438
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 22/350 (6%)
Query: 6 ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLL 65
E V R + +I YD L++A GA + FG +++A L+ + A IR ++L
Sbjct: 101 EAVDTTARYVVTGSRRIPYDYLIVATGARHTYFGNDTWEDHAPGLKTITDATAIRARILS 160
Query: 66 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVT 124
++V + +LL VVGGGPTGVE +G +++ R + + + V
Sbjct: 161 AFEQAEVTD-DPHFRRKLLTFAVVGGGPTGVELAGAIAELSRRTIVHDFRRIDSSSARVV 219
Query: 125 LIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVW 182
L+EA E IL + L A QL + GV +V G V D + L +GTE+ ++W
Sbjct: 220 LVEAGERILPAMPPCLSRKAQRQLERLGVEIVFGNAVAGCDESGVRLANGTEIGSACILW 279
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
+ GV S K + GR+ +DE L P ++F +GD + +++ G+ V P +A
Sbjct: 280 AAGVMASRAAKWIGAAADRAGRVIVDERLNPPGHDEIFVIGDTASVMDAAGRAV-PGVAP 338
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
A++ G+Y + G G R+ PF YR G++ATIGR A+ D + K
Sbjct: 339 AAKQMGRYAADAIR--GDMAGRRSA---------PFRYRDYGNLATIGRKAAVADFGKAK 387
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L+G+ +WL W A+L +V +RNR V ++WA +V +R+
Sbjct: 388 ------LSGYPAWLAWNFAHLWFLVGFRNRLVVFLDWAVAYVRNDRTARL 431
>gi|365986501|ref|XP_003670082.1| hypothetical protein NDAI_0E00230 [Naumovozyma dairenensis CBS 421]
gi|343768852|emb|CCD24839.1| hypothetical protein NDAI_0E00230 [Naumovozyma dairenensis CBS 421]
Length = 589
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 192/354 (54%), Gaps = 34/354 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TFGI GV+++ FL+E+ ++ +IR+K NL +++ + E+
Sbjct: 241 EIKYDYLISAVGAEPNTFGIPGVEKHGLFLKEIPNSLQIRQKFASNLEKANLLPPGDPER 300
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+++ V + + L+EA I L+ F+ +L
Sbjct: 301 KRLLSIVVVGGGPTGVETAGELQDYVHQDLQKFLPSVAKEVQIHLVEALPIVLNMFEKKL 360
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT-----EVPYGLLVWSTGVGPS 189
YA L K+ ++L ++ V V+ LI +DG ++PYG L+W+TG
Sbjct: 361 SSYAQETLEKTSIKLHLKTAVAKVEKDHLIAKTKSDDGKTVIEEKIPYGTLIWATGNKAR 420
Query: 190 TLVKSLDLPK-----SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
+V +L PK + ++++L+V ++FA+GD + ++ LP AQVA
Sbjct: 421 PIVTNL-FPKITEQNKSTRALSVNKYLQVIGSNNIFAIGD-NAFIG------LPPTAQVA 472
Query: 245 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYKAL 295
+Q +YL +++ + + D PF Y H G++A +G +A+
Sbjct: 473 HQQAEYLAKNFDKMAQLPNFHEKLQSRKQKFDLLFEENKFKPFKYTHFGALAYLGSERAI 532
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
++ K S + G +++ +WR +YL ++S R+RF V +W F RD
Sbjct: 533 ANITYGKRSL-YTGGGLITFYIWRLSYLAMILSARSRFKVITDWLKLAFFKRDF 585
>gi|302843358|ref|XP_002953221.1| hypothetical protein VOLCADRAFT_105834 [Volvox carteri f.
nagariensis]
gi|300261608|gb|EFJ45820.1| hypothetical protein VOLCADRAFT_105834 [Volvox carteri f.
nagariensis]
Length = 644
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 157/282 (55%), Gaps = 42/282 (14%)
Query: 1 MKVHCETVTDELRTL------------EPWKFKISYDKLVIALGAEASTFGIHGVKENAT 48
++ CET+ E + P +F+I YDK V+A+G + +TFG+ GVKE+
Sbjct: 162 LEAQCETLDPEAKVAVCTSSFAYDDGRRP-QFEIQYDKAVVAVGEQPATFGVPGVKEHCF 220
Query: 49 FLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMR 108
F++E+ A +R ++ L+ +PG SE ++ L+ VVVGGGPTGVEF+G LSDF+
Sbjct: 221 FMKEISDAVALRSRIAEKFELASLPGTSEADRRAALNFVVVGGGPTGVEFAGTLSDFLRE 280
Query: 109 DVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQK 166
D+R++Y + Y+ VTL++ A IL+ FD+ L A L+ SGV + G+ V V + K
Sbjct: 281 DLRKKYPALMPYVRVTLLQSAQSILTQFDEGLGQRALEALTSSGVEVRTGVRVVQVTANK 340
Query: 167 LILNDGTEVPYGLLVWSTGVGPSTLVKSL--DLPK----------SPGGRIGIDEWLRVP 214
++L DG E+ G+ VWS G P LV + ++P+ SPG ++ +D +LRV
Sbjct: 341 VVLKDGEEIFCGVCVWSAGNAPRPLVTQIASEVPQQAMAAEASRLSPGSKLCVDSFLRVV 400
Query: 215 SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
D+ A+GDCS VA +QG YL LLN
Sbjct: 401 GASDLLALGDCS---------------LVAGQQGAYLAHLLN 427
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 277 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 336
PF + LG MA +G KAL + + + L L G +++L+W+S Y+T+ VS+RNR +
Sbjct: 570 PFEFLSLGIMAYVGSDKALTQV-EAFDVINLKLYGSVAFLLWKSVYITKQVSFRNRVLIL 628
Query: 337 VNWATTFVFGRDIS 350
+W VFGRDIS
Sbjct: 629 FDWMKARVFGRDIS 642
>gi|399043413|ref|ZP_10737713.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF122]
gi|398058099|gb|EJL50013.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF122]
Length = 445
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 170/335 (50%), Gaps = 23/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K+ +D L+IA G S FG A L++++ A+ IR K+L L++ E+
Sbjct: 122 KVPFDHLIIATGMRPSYFGHEEFARYAPALKDLNDAETIRTKILRAFELAETTD-DASER 180
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDR 138
+R + V+VG GPTGVE + ++ +R+ + + D + L N +L +F +
Sbjct: 181 ARQMTFVLVGAGPTGVELAASMAHMAAVTLRKNFRRIDPADSTIILLEGGNRVLPTFAET 240
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L AT +L + GV+++ G+ V+ VD Q ++ G + ++W+ GV S +VK
Sbjct: 241 LSRKATARLEELGVKVMTGVKVEKVDEQGVVAG-GKRISSATVLWTAGVAASPIVKMFGA 299
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GR+ + L VP V DVF VGD + +++ G+ V P +AQ A +QG+Y+ L+
Sbjct: 300 DTDRAGRVIVGPCLEVPGVPDVFFVGDTASVMQN-GRPV-PGVAQAAIQQGRYVGRLI-- 355
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
N K + PF Y + G+MA +GR A++ E+ ++GFL+WL+
Sbjct: 356 --------CNRLKGRDAKRPFRYSNKGNMAVVGRNFAIL------EAGRFRMSGFLTWLI 401
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ + +NR V W ++ G+ SR+
Sbjct: 402 WAFIHMASLPQLQNRLRVEFQWLWSYFTGQRTSRL 436
>gi|361130969|gb|EHL02699.1| putative NADH dehydrogenase [Glarea lozoyensis 74030]
Length = 395
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 178/338 (52%), Gaps = 39/338 (11%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
R ++ F++SYD LV+A G+E +TFG GV E+ ++ V A+++R ++L L+
Sbjct: 71 FRGVDAHDFEVSYDILVLAPGSETNTFGTPGVLEHCYTMKSVKDARKLRERMLDCFELAS 130
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 130
+P SE++K LLH +VGGGPTGVE + E+ + I + Y +KDY+ +++ + A +
Sbjct: 131 LPICSEKQKRDLLHFAIVGGGPTGVELAAEIDELIHGHLSHLYHSLKDYVSISVYDIAPK 190
Query: 131 ILSSFDDRLRHYATTQLSKSGV--RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188
+L FD+ L YA + ++ V R+ R I I DG EV +G+ +W+TG
Sbjct: 191 LLGPFDEELSAYAMEKFNRRNVNTRMGRHIESFQQGSMKIKEDG-EVGFGICIWATGNKA 249
Query: 189 STLVKSLDLPKSPGG--RIGIDEWLRV---PSVQD------------VFAVGDCSGYLES 231
S LV+ LD+ KS GG RI D+ LRV P+ Q V+A+GD + + S
Sbjct: 250 SQLVEDLDVRKSEGGMKRILTDKHLRVLQTPNKQQKENDEKSDPIPGVYALGDAADIMGS 309
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDM-ELGDPFVYRHLGSMATIG 290
LP A+VA ++ K+L L + + S +D+ E + F Y +A IG
Sbjct: 310 E----LPTTAEVAVQKAKWLAKHLQETSEM----SISTEDVSERSNAFHYEQKPLVAYIG 361
Query: 291 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYL--TRV 326
R+ +V E KG G +WL WRS L TR+
Sbjct: 362 RHDGVV------EGKG-DWTGAGAWLAWRSGNLEWTRI 392
>gi|406867579|gb|EKD20617.1| external NADH-ubiquinone oxidoreductase 2 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 484
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 179/352 (50%), Gaps = 41/352 (11%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + +D+LV+A G+E +TFG GV+E+ F++ V A ++ ++L L+ +PG SE
Sbjct: 153 FDVRFDRLVVAPGSEVNTFGTPGVREHCLFMKSVSDAMALKERVLDCFELASLPGFSEGR 212
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ LLH V+VGGGPTGVE + EL + + + + Y +D + +++ + A+ +L F ++
Sbjct: 213 RRDLLHFVIVGGGPTGVELAAELDELVHGHLLEIYPDCRDLVSISVYDVADRMLGQFGEK 272
Query: 139 LRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
L YA + + V R ++G K V S K DG EV +G+ VW+ G S LV+
Sbjct: 273 LSEYAMEKFRRRDVNVRMSRHIQGFEKGVMSVK---EDG-EVGFGVAVWAAGNKTSGLVE 328
Query: 194 SLD-LPKSPGGRIGIDEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+ + K G + D+ LRV +V+ V+A+GD +G ++ LPA A+VA
Sbjct: 329 GMKGVRKDDKGMLVTDQHLRVLGDGQGDGAVRGVYALGDAAGIDGNS----LPATAEVAV 384
Query: 246 RQGKYLFSLLNRIGKA------GGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
++ K+L L I A G RA K G F Y +A IGR +VD
Sbjct: 385 QKAKWLAQHL--IDSADDELAFGSSRAAQVK----GQGFQYEQKALVAYIGRKDGVVD-- 436
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
G + G +WL WR L SWR + + V W GR+I+R
Sbjct: 437 -----GGGAWTGKSAWLAWRGGSLQWSRSWRRKAMMLVYWVMNKWDGREIAR 483
>gi|224114085|ref|XP_002316663.1| predicted protein [Populus trichocarpa]
gi|222859728|gb|EEE97275.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 146/235 (62%), Gaps = 11/235 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KVHC ++ + + +F + YD L+IA+GA +TF GV EN FL+EV AQ+IR+
Sbjct: 140 KVHCRPNSESSKNGKE-EFVVDYDYLIIAMGARPNTFNTPGVVENCNFLKEVEDAQQIRQ 198
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + + +P S+EE+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y KD++
Sbjct: 199 SVINSFEKASLPTFSDEERKRILHFVVVGGGPTGVEFAAELHDFVNEDLVKLYPAAKDFV 258
Query: 122 HVTLIEANE-ILSSFDDRLRHYATTQLSKSG--VRLVRGIVKDVD---SQKLILNDG--T 173
+TL+EA++ IL+ FD R+ +A + + G V+L +VK D S K+ NDG T
Sbjct: 259 KITLLEASDHILNMFDKRITGFAEEKFQRDGIDVKLGSMVVKVSDKEISTKVRGNDGEIT 318
Query: 174 EVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+PYG++VWSTG G ++K + +S + DEWLRV ++A+GDC+
Sbjct: 319 TIPYGMVVWSTGNGTHPVIKDFMQQIGQSNRRALATDEWLRVEGCSTIYALGDCA 373
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL + NR+ +A + E G PF Y+HLG A +G
Sbjct: 467 LPATAQVAAQQGTYLANCFNRMEEAEKNPEGPIRFREEGRHRFHPFRYKHLGQFAPLGGE 526
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y +++VSWR R V +W FVFGRD S I
Sbjct: 527 QTAAQLPGDWVSIGQSS----QWL-WYSVYASKLVSWRTRVLVISDWTRRFVFGRDSSGI 581
>gi|383762772|ref|YP_005441754.1| putative oxidoreductase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381383040|dbj|BAL99856.1| putative oxidoreductase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 412
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 171/343 (49%), Gaps = 23/343 (6%)
Query: 13 RTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV 72
R LE ISYD L++A G+ FG G + +A L+ + A IR ++LL+ +++
Sbjct: 87 RCLETSAGAISYDYLILAAGSTTHFFGTPGAEAHALPLKSMADAIAIRNRVLLSYEKANL 146
Query: 73 PGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE- 130
E + ++L V+VGGGPTGVEF+ L++ I +R+ + + V L+EA E
Sbjct: 147 ES-DPERRQQILTFVIVGGGPTGVEFASALAELINGPLRRDFPFLSSSPGRVVLVEAMEA 205
Query: 131 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189
+L F L+ YA +L + GV ++ G V +D + L D + +VW+ GV
Sbjct: 206 LLPGFHPHLQDYAAKRLRRIGVEVLLGAPVTRIDESTVTLKDEMRITAETIVWTAGVQGI 265
Query: 190 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
V P GR+ + L+ P +V+ VGD + YLE LP +A VA +QGK
Sbjct: 266 LPVARWGFPVVKSGRVAVLPTLQTPDHPEVYVVGDLA-YLEQKSAP-LPMVAPVAIQQGK 323
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+ + N + + G + PF YR G+M TIGR A L L
Sbjct: 324 W--AAQNILRQVHGQQPL---------PFRYRDRGAMVTIGRNAAAAQL------GSLKF 366
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
GF +W++W + +L +V +RNR V +NWA + F I+R+
Sbjct: 367 TGFPAWVLWLTVHLFNLVGFRNRLVVMLNWAWDYFFFERIARL 409
>gi|240256027|ref|NP_193880.5| NADH dehydrogenase [Arabidopsis thaliana]
gi|408407680|sp|F4JJJ3.1|NDB3_ARATH RecName: Full=NAD(P)H dehydrogenase B3, mitochondrial; Flags:
Precursor
gi|332659059|gb|AEE84459.1| NADH dehydrogenase [Arabidopsis thaliana]
Length = 580
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 138/216 (63%), Gaps = 8/216 (3%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR ++ + + +PG++E+
Sbjct: 156 EFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKASLPGLNEQ 215
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y K+ + +TL+E A+ IL+ FD
Sbjct: 216 ERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPKAKNLVQITLLEAADHILTMFDK 275
Query: 138 RLRHYATTQLSKSG--VRLVRGIVKDVD---SQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
R+ +A + ++ G V+L +VK D S K + + +PYG++VWSTG+G ++
Sbjct: 276 RITEFAEEKFTRDGIDVKLGSMVVKVNDKEISAKTKAGEVSTIPYGMIVWSTGIGTRPVI 335
Query: 193 KSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
K G R + DEWLRV +++A+GDC+
Sbjct: 336 KDFMKQIGQGNRRALATDEWLRVEGCDNIYALGDCA 371
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGR 291
+LPA QVA +QG YL +R+ + G PF YRHLG A +G
Sbjct: 465 LLPATGQVAAQQGTYLAKCFDRMEVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGG 524
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD SR
Sbjct: 525 EQTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSR 579
Query: 352 I 352
I
Sbjct: 580 I 580
>gi|50285295|ref|XP_445076.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524379|emb|CAG57976.1| unnamed protein product [Candida glabrata]
Length = 524
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 190/355 (53%), Gaps = 37/355 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TF I GV++ FL+E+ H+ +IR++ L N+ +++ + E+
Sbjct: 177 EIKYDYLITAVGAEPNTFNIPGVEKYGNFLKEIPHSLQIRKRFLENIQKANLLPKGDPER 236
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRL 139
RL+ VVVGGGPTGVE +GEL DF+ +++ + + + + + L+EA I L+ F+ +L
Sbjct: 237 KRLMSIVVVGGGPTGVETAGELQDFVHQELGKFLPSLAEDVQIHLVEALPIVLNMFEKKL 296
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTG--VGP 188
YA + L + ++L +R V V+ +L+ DG+ +PYG L+W+TG P
Sbjct: 297 SSYAQSVLEDTSIKLHLRTAVSKVEETQLLAKTKHEDGSVTEETIPYGTLIWATGNKCRP 356
Query: 189 --STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD---CSGYLESTGKTVLPALAQV 243
+ L K + + + I+ +L+V ++FA+GD C LP AQV
Sbjct: 357 IITDLFKKIPEQNTSTRALNINSFLQVQGSNNIFAIGDNAFCG----------LPPTAQV 406
Query: 244 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYKA 294
A +Q +YL +++ + + A+ E D PF Y HLG++A +G +A
Sbjct: 407 AHQQAEYLAKTFDKMAQLPNFHKSLAERKEKADLLFEENNFKPFKYTHLGALAYLGSERA 466
Query: 295 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+ ++ K S + G ++ +WR +YL ++S R +F V +W F RD
Sbjct: 467 IANITYGKRSL-YTGGGLFTFYIWRLSYLAMLLSARLKFKVVSDWLKLAFFRRDF 520
>gi|120602932|ref|YP_967332.1| NADH dehydrogenase [Desulfovibrio vulgaris DP4]
gi|120563161|gb|ABM28905.1| NADH dehydrogenase [Desulfovibrio vulgaris DP4]
Length = 439
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 164/329 (49%), Gaps = 25/329 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
I YD LV+A G+ + FG+ G +E++ L+ + A +R +++ + + E
Sbjct: 94 LDIPYDYLVVAAGSRTAYFGVPGAEEHSFSLKTLEEAVCLRNQIISCFEQAALESDPERR 153
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFDD 137
++ +L VVGGGPTGVE++G L++ + +R+ + + + + V L+EA +L F +
Sbjct: 154 RA-MLTFTVVGGGPTGVEYAGALAELVRAPLRKDFPELDMNDVRVVLLEAAPGVLGGFPE 212
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
RLR YA +L GV + + V +V + ++ G +P +VW+ GV + + +
Sbjct: 213 RLRGYAKKRLGAMGVEVRLDASVAEVTAAGVLFASGEHLPTHTVVWTAGVRGEVVAEHMG 272
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
LP GGR+ + L+V + +VF VGD S P Q + + ++L
Sbjct: 273 LPLGRGGRVAVSPTLQVEGLPEVFVVGDMSLPEGQNPPMNAPNATQQGRLAAENILAMLQ 332
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R PF YR G+MATIGR A+V + + +GFL+WL
Sbjct: 333 RRDPV---------------PFRYRDKGAMATIGRQAAVVRM------GNFAFSGFLAWL 371
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+W +L ++ +RNR V +NWA ++F
Sbjct: 372 LWLFVHLAYLIGFRNRLIVLINWAWDYLF 400
>gi|168023071|ref|XP_001764062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684801|gb|EDQ71201.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 579
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 153/264 (57%), Gaps = 14/264 (5%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV C +D ++ + +F++ YD LV+A+GA ++TFG GV+E FL+E+ A++IR
Sbjct: 142 KVVCRDSSD-VKCVGKEEFELEYDYLVVAVGATSNTFGTKGVEEYCHFLKEIEDAEKIRG 200
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
+++ + +P +S+E++ +LL V+VGGGPTGVE++ EL D I D+ Y ++ +
Sbjct: 201 RIVDCFETASLPHLSDEDRRKLLSFVIVGGGPTGVEYAAELHDLIHEDLTGLYPELQKIV 260
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT-----E 174
+T++++ + IL++FD R+ YA + ++ G+ + G V V + + E
Sbjct: 261 KITVVQSGDHILNTFDGRISEYAEKKFAREGIDVKIGSRVLGVSDESITFKSKATGNLVE 320
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLE 230
+PYG++VWSTG+G +V D K G + DEWLRV + + V+A+GDC+ +
Sbjct: 321 MPYGMIVWSTGIGTRPVVA--DYMKQIGQTDRRVLATDEWLRVKNAEGVYALGDCATIEQ 378
Query: 231 STGKTVLPALAQVAERQGKYLFSL 254
+ L ++A++ G S+
Sbjct: 379 RKIAEDIAYLFKLADKNGDGTLSV 402
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 238 PALAQVAERQGKYLFSLLNRIGKA----------GGGRANSAKDMELGDPFVYRHLGSMA 287
PA AQVA +QG+YL N + GGGR PF+YRHLG A
Sbjct: 467 PATAQVAAQQGEYLARSFNHLATEDPDEGPVRIRGGGRHRC-------QPFLYRHLGQFA 519
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
+G +L + S G S WL W S Y ++ VSWR R V +W FVFGR
Sbjct: 520 PLGGETTAAELPGDWVSIGRST----QWL-WYSVYASKQVSWRTRALVIFDWTKRFVFGR 574
Query: 348 DISRI 352
D SR+
Sbjct: 575 DSSRM 579
>gi|392396417|ref|YP_006433018.1| NADH dehydrogenase, FAD-containing subunit [Flexibacter litoralis
DSM 6794]
gi|390527495|gb|AFM03225.1| NADH dehydrogenase, FAD-containing subunit [Flexibacter litoralis
DSM 6794]
Length = 451
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 185/353 (52%), Gaps = 37/353 (10%)
Query: 4 HCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
H E + D L TL YD LVIA G++ + +G ++E + L++V A IR
Sbjct: 106 HDENIIDTNLGTLH-------YDYLVIANGSKTNFYGNKEIEEKSFALKQVPQALAIRNH 158
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-- 120
LL N + + EE+ + L++ V+VGGGPTGVE +G L + + + + Y + D+
Sbjct: 159 LLKNFEKAQLVQTIEEQHA-LMNVVIVGGGPTGVEVAGALGELKLHVLPKDYPEL-DFRR 216
Query: 121 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYG 178
+ + L+EA+ +L+ D A L + V++ +G+ VK D + L++G +
Sbjct: 217 MEIHLVEASPRLLNGMTDNSSRKAEDYLKEFTVQIWKGVSVKSFDGNHVELSNGKNLAST 276
Query: 179 LLVWSTGVGPSTLVKSLDLPKS---PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKT 235
LVW+ GV L+K L P+ G RI +DE+ RV + ++FA+GD + +
Sbjct: 277 TLVWAAGV-TGNLIKGL--PEEVVLQGNRIIVDEFNRVKGIDNIFALGDIAAMVSEDFPR 333
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
P LA VA +QGK L L R+ + K+M+ PF Y + GSMAT+GR +A+
Sbjct: 334 GFPMLAPVAMQQGKTLGDNLKRML--------NKKEMK---PFKYFNKGSMATVGRNRAV 382
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 347
VDL NK +S GF +W VW +L ++ ++NRF + +W F + R
Sbjct: 383 VDL-PNK----MSFQGFFAWFVWLFVHLMFIIGFKNRFIILTSWVWNYFTYDR 430
>gi|449675452|ref|XP_002159552.2| PREDICTED: NAD(P)H dehydrogenase B2, mitochondrial-like [Hydra
magnipapillata]
Length = 568
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 139/238 (58%), Gaps = 13/238 (5%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+ + + VT +++ +F + YD +V+A+GAE +TF I GVKEN FL+ VH A IR
Sbjct: 142 IDIENKKVTCHDKSVTSSEFCLDYDYVVVAIGAETATFNIQGVKENTHFLKSVHDAHAIR 201
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKD 119
+ ++ + + +PG S+EE RLLH VVVG GPTGVEFS +L DF+ D+++ Y H+ +
Sbjct: 202 KHIMDSFESAAIPGQSDEELQRLLHFVVVGAGPTGVEFSAQLHDFVKDDLQKYYPKHLIE 261
Query: 120 YIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDG----- 172
+TLI+ +L +F + + Y K G+ +V V ++ ++ L D
Sbjct: 262 KAQITLIDGLKRVLYTFSEDISSYTEELFKKQGINVVTSTFVTGIEKTQISLQDSQTKKH 321
Query: 173 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPG--GRIGI--DEWLRVPSVQDVFAVGDCS 226
+ +P+GL VW G+ P L K + + + PG ++G+ D L+V + +VFA+GDC+
Sbjct: 322 SVMPFGLCVWCGGITPRELTKKV-INQIPGQNNKMGLLTDGHLKVKNTSNVFALGDCA 378
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 234 KTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 293
K L AQVA ++G YL LLN ++ +PF+Y HLG+ +G +
Sbjct: 460 KNSLAPTAQVAYQEGVYLGKLLNE-----PEMLDNEASFVSAEPFLYNHLGTFVYVGNNQ 514
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
A+++ + + KG S ++ +W+ Y ++ +S R R YV +W +++FGRDISR
Sbjct: 515 AVLESPKIGDFKGYS-----AFWMWKGVYASKCISLRMRCYVIFDWMKSYLFGRDISR 567
>gi|418684471|ref|ZP_13245655.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410740671|gb|EKQ85385.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
Length = 422
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ Q + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINEQGVQL-EGKMIPTQTVIWAAGVQANSIASTLGTTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QGKY+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGKYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|421128816|ref|ZP_15589027.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. 2008720114]
gi|410359928|gb|EKP06968.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. 2008720114]
Length = 422
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L K GV ++ G V D++ Q + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLEKRGVEVLTGTRVIDINEQGVQL-EGKMIPTQTVIWAAGVQANSIASTLGTTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|221633885|ref|YP_002523111.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Thermomicrobium roseum DSM 5159]
gi|221156852|gb|ACM05979.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Thermomicrobium roseum DSM 5159]
Length = 468
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 176/337 (52%), Gaps = 22/337 (6%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
++ YD LV+ALG +T+GI G+ + A ++ + +A +R L+ L +D+ E
Sbjct: 108 PLELPYDHLVLALGGVPATYGIPGLDDYAFDVQRLSNAFALRNHLIDLLEQADIEPDPAE 167
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
++ RLL VV+GGGPTGVE + E+ + + D + L+EA +L+ F D
Sbjct: 168 QR-RLLTVVVIGGGPTGVEVAAEIRSLFTHALPYYRAIQPDTARIVLVEALPRLLTGFPD 226
Query: 138 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+ H A +L + G+ ++ G V V+ ++L+DGT + +V + GV P+ +V+S
Sbjct: 227 AVAHRAARELRQRGIEVLLGRKVIQVEPAAVVLDDGTRLESRTIVSAIGVEPNPIVRSFG 286
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVAERQGKYLFSLL 255
LP GRI +DE+LRV +V+A+GD + ++ +TG+ P AQ A RQ K L L
Sbjct: 287 LPLDQRGRIVVDEYLRVTGHPNVWAIGDNAAVIDPATGRPYAPT-AQHAVRQAKLLARNL 345
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
S + L P YR G M T+G + A+ L + ++L GFL+W
Sbjct: 346 ----------VASLRSEPL-QPMRYRTRGMMVTLGDHDAIAWLGR------VTLTGFLAW 388
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+WR+ L ++ W R +A+ W +F ++ ++
Sbjct: 389 WLWRTYALLQIPRWDRRIRLAMEWTLDLLFPPELVQL 425
>gi|407465783|ref|YP_006776665.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosopumilus sp. AR2]
gi|407048971|gb|AFS83723.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosopumilus sp. AR2]
Length = 452
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 186/356 (52%), Gaps = 54/356 (15%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE-- 79
I YD LVIALG+E + FG+ V++NA ++ ++ A +R +++ D+ +E E
Sbjct: 105 IHYDFLVIALGSETNFFGMADVEKNAYTMKTLNDAVMLRNRVI------DMLEQAENETN 158
Query: 80 ---KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSS 134
+ L+ VVVGGG G+E +GEL D ++ D R+ Y + K+ + V ++EA IL
Sbjct: 159 PILRKSFLNFVVVGGGFAGIETAGELMDLLL-DARKHYPTIHKEDLKVIVLEALGMILPG 217
Query: 135 FDDRLRHYATTQLSKSGV--RLVRGIV----KDVDSQKLILN-----DGTEVP---YGLL 180
F+ +L +A ++ + G+ RL + +V ++ L N D +E+ L
Sbjct: 218 FNQKLADFARDKMIERGIDIRLKTAVTSFDGNEVTTKSLDENLKDSIDTSEIDSIVTKTL 277
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
+W+ GV P +K + K+ G++ ++++L V VFA+GDC+ +L+ + LP
Sbjct: 278 IWTAGVTPVNTIKR-SMFKTEKGKVIVNDYLEVLEFPGVFAIGDCALHLDPKTQRPLPPT 336
Query: 241 AQVAERQGKY----LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 296
AQ+AE Q K L SL+ NS K+ FVY G MA IG+ +
Sbjct: 337 AQIAEAQAKIAAKNLISLIR----------NSKKE-----KFVYHSKGQMAIIGKRSGIA 381
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G++++GF +WL+WR+ YL+++ ++ + V ++W F RDISR+
Sbjct: 382 TFL------GMNISGFWAWLIWRNVYLSKITTFDKKIRVFLDWTIDLFFDRDISRL 431
>gi|409973922|pdb|4G6G|A Chain A, Crystal Structure Of Ndh With Trt
gi|409973923|pdb|4G6G|B Chain B, Crystal Structure Of Ndh With Trt
gi|409973924|pdb|4G6H|A Chain A, Crystal Structure Of Ndh With Nadh
gi|409973925|pdb|4G6H|B Chain B, Crystal Structure Of Ndh With Nadh
gi|409973926|pdb|4G73|A Chain A, Crystal Structure Of Ndh With Nadh And Quinone
gi|409973927|pdb|4G73|B Chain B, Crystal Structure Of Ndh With Nadh And Quinone
gi|409973928|pdb|4G74|A Chain A, Crystal Structure Of Ndh With Quinone
gi|409973929|pdb|4G74|B Chain B, Crystal Structure Of Ndh With Quinone
Length = 502
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 195/361 (54%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + I YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL ++
Sbjct: 148 LHQAEPAE--IKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKAN 205
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 206 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 265
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 266 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 325
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++++L+V ++FA+GD + L
Sbjct: 326 WATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGL 378
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + N S KD E + PF Y LG++A
Sbjct: 379 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAY 438
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 439 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 497
Query: 349 I 349
Sbjct: 498 F 498
>gi|325300007|ref|YP_004259924.1| NADH dehydrogenase (ubiquinone) [Bacteroides salanitronis DSM
18170]
gi|324319560|gb|ADY37451.1| NADH dehydrogenase (ubiquinone) [Bacteroides salanitronis DSM
18170]
Length = 451
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 172/336 (51%), Gaps = 38/336 (11%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
KI YD LV+A G ++ FG ++ A ++ + A +R LL N S V +E+E+
Sbjct: 102 KIEYDYLVLAAGTTSNFFGNQNIEREAIPMKTLQEAMGLRNALLGNFERS-VTCATEQER 160
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEANE-IL 132
LL+ V+VGGG TGVE +G L++ +RY KDY + + LIEA+ +L
Sbjct: 161 RELLNIVIVGGGATGVEIAGALAEM------KRYVLPKDYPDMNENLLQIYLIEASSRLL 214
Query: 133 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
S + L + G+ + + V D + K+IL DGT++P +W +GV +T+
Sbjct: 215 SGMAPVSSQKSAEFLRRMGINVWLDKKVMDYRNHKVILEDGTQIPTRTFIWVSGVRANTI 274
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-C--SGYLESTGKTVLPALAQVAERQG 248
GGRI +D + + ++F +GD C SG E G P LAQVA +QG
Sbjct: 275 GNMPAASLGRGGRIKVDAYNKAEGFDNIFCIGDQCIMSGDKEYPGGH--PQLAQVAIQQG 332
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
L + L R+ K K M+ PF YR+LGSMAT+GR KA+ + L
Sbjct: 333 SLLAANLIRLQK--------GKAMK---PFRYRNLGSMATVGRNKAVAEF------SSLK 375
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
G+++WL+W +L ++ RN+ V +NW +++
Sbjct: 376 TQGWIAWLLWLVVHLRSILGVRNKINVLLNWMWSYL 411
>gi|397639280|gb|EJK73483.1| hypothetical protein THAOC_04891 [Thalassiosira oceanica]
Length = 624
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 178/378 (47%), Gaps = 72/378 (19%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGIS-- 76
+ ++SYDKL++A+G++ +TFGI GV E+ F++E + + +LL NL + +
Sbjct: 220 QLELSYDKLIVAVGSQPNTFGIPGVAEHGMFMKEAEDSTRLHSRLLSNLEKAAALSVEGD 279
Query: 77 --EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEIL 132
+E RLL VVGGGPTGVE S EL+DF DV + Y + + + I + L+E +L
Sbjct: 280 KYAKEIDRLLTVFVVGGGPTGVELSAELADFAHSDVAKIYGADISERIKIVLVEVMPRLL 339
Query: 133 SSFDDRLRHYATTQLSKSGVRLVRGI------VKDVDSQKLI-------------LNDGT 173
FD L A L GV + G +DV Q + N T
Sbjct: 340 GPFDASLAEVARDHLVSKGVEVRTGTAVTHVEARDVTCQPSLPRGATPEQKKEAEANSQT 399
Query: 174 EVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDC--SGYL 229
E G LVW+ G+G LVK L L +S + +DE LRV V+A+GDC SG+
Sbjct: 400 E-EMGCLVWAAGIGARPLVKKLAQKLGQSDMRGLKVDEDLRVLGTDGVYAIGDCALSGF- 457
Query: 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATI 289
P AQVA +QGK+ +G+A ++S FVY H GS+ +
Sbjct: 458 --------PPTAQVAAQQGKH-------VGRAIRDGSDSK--------FVYHHAGSLCCL 494
Query: 290 GRYKALVDL------------------RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 331
G + + K+ + S+ G ++ +WRS Y T+++S +
Sbjct: 495 GSSNGIAQMVVPGGSGANNVWDLLGAPAVGKDGEQRSVTGLPAFALWRSLYFTKLLSTSS 554
Query: 332 RFYVAVNWATTFVFGRDI 349
+ + +W ++GRDI
Sbjct: 555 KMSLGGDWINAHIWGRDI 572
>gi|452986909|gb|EME86665.1| hypothetical protein MYCFIDRAFT_29791 [Pseudocercospora fijiensis
CIRAD86]
Length = 433
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 189/367 (51%), Gaps = 46/367 (12%)
Query: 2 KVHCET-----VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHA 56
+VHC + L+ P F +SYDKL++A G + FG G E+A+FLR A
Sbjct: 94 EVHCRPFVKTIAEEALQDTHP--FTLSYDKLILAPGCDIQAFGTPGALEHASFLRCTDDA 151
Query: 57 QEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 116
++I+++LL L + P ++++++ +L ++VGGGP G+E + EL D +++R Y+H
Sbjct: 152 RKIQQRLLEMLDAASTPNLTDQQQREILRIIIVGGGPIGIEATAELYDLWFKEMRHLYAH 211
Query: 117 VKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE 174
+ + + + + A IL +FD+RL YA +L G+++ ++ V+ + + +
Sbjct: 212 LDGKLSLEIHDVAPTILGNFDERLGEYAVKKLVDRGIKIETESHIEKVEEGAIYTKERGK 271
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPG-GRIGIDEWLRVPSVQD-----VFAVGDCS-- 226
+ YG+L+W+TG P+ L + LD+ K RI D LRV D VFA+GD +
Sbjct: 272 IKYGMLLWATGSAPNKLAEKLDVKKDDKLSRISTDRRLRVRDTNDRVLDGVFALGDSADI 331
Query: 227 -GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGS 285
GY LP LA+VA ++ +YL LN + D LG PF YR +
Sbjct: 332 EGY-------SLPQLAEVAVQKAEYLAQALN------------SGDETLG-PFEYRQKPN 371
Query: 286 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTR-VVSWRNRFYVAVNWATTFV 344
+A +G+ ++ R+ G+ +WL WRS + SWR + ++W V
Sbjct: 372 LAYLGQKDGVIGGREE-------WTGYSAWLAWRSGSIFHWPRSWRRTIMIGISWLFNKV 424
Query: 345 FGRDISR 351
GRDI+R
Sbjct: 425 GGRDIAR 431
>gi|190408127|gb|EDV11392.1| NADH:ubiquinone oxidoreductase [Saccharomyces cerevisiae RM11-1a]
gi|207342620|gb|EDZ70335.1| YML120Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148453|emb|CAY81698.1| Ndi1p [Saccharomyces cerevisiae EC1118]
Length = 513
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 192/352 (54%), Gaps = 31/352 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL +++ + E+
Sbjct: 166 EIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPER 225
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F+ +L
Sbjct: 226 RRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKL 285
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGVGPST 190
YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 286 SSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARP 345
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
++ L +P+ + G ++++L+V ++FA+GD + LP AQVA +
Sbjct: 346 VITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQVAHQ 398
Query: 247 QGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYKALVD 297
+ +YL +++ + + N S KD E + PF Y LG++A +G +A+
Sbjct: 399 EAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLWFEENNFKPFKYNDLGALAYLGSERAIAT 458
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 459 IRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 509
>gi|338213153|ref|YP_004657208.1| NADH dehydrogenase (ubiquinone) [Runella slithyformis DSM 19594]
gi|336306974|gb|AEI50076.1| NADH dehydrogenase (ubiquinone) [Runella slithyformis DSM 19594]
Length = 434
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 164/322 (50%), Gaps = 23/322 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE-EEK 80
+ YD LV+A GA+ + FG+ + ENA ++ V A +R ++L N D + EE+
Sbjct: 103 VEYDFLVLATGADTNFFGMKNMIENAMPMKSVSEALALRNRMLQNF--EDALSVETLEER 160
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDR 138
L++ V+VGGGPTGVE +G L++ + + Y + D + + L E++ E+L D+
Sbjct: 161 HGLMNVVIVGGGPTGVEVAGTLAEMKRHILPKDYPELNFDSMQIYLYESSPEVLEVMSDQ 220
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
A L+ GV L G+ + D D + N G + L+W+ GV + +
Sbjct: 221 ASKKAKEYLTDLGVNLRLGVRIIDFDGKYATTNTGDRLRTNNLIWAAGVKANAIEGIPVA 280
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GGR+ ++ + +V Q++FA+GD + E P LAQ A +QG+ L + R
Sbjct: 281 SIVRGGRVKVNRFSQVEGTQNIFALGDLASMAEEKYPNGHPQLAQPAMQQGELLAKNMVR 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ K ++M+ PF Y+ LGSMAT+GR A+VDL K GF +WL
Sbjct: 341 MMK--------GQEMK---PFTYKDLGSMATVGRNLAVVDLPFWK------FQGFFAWLT 383
Query: 318 WRSAYLTRVVSWRNRFYVAVNW 339
W +L +V +NR + +NW
Sbjct: 384 WMFVHLISIVGVKNRLLIFINW 405
>gi|323352920|gb|EGA85220.1| Ndi1p [Saccharomyces cerevisiae VL3]
Length = 471
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 193/354 (54%), Gaps = 31/354 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL +++ + E+
Sbjct: 124 EIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPER 183
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F+ +L
Sbjct: 184 RRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKL 243
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGVGPST 190
YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 244 SSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARP 303
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
++ L +P+ + G ++++L+V ++FA+GD + LP AQVA +
Sbjct: 304 VITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQVAHQ 356
Query: 247 QGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYKALVD 297
+ +YL +++ + + N S KD E + PF Y LG++A +G +A+
Sbjct: 357 EAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLWFEENNFKPFKYNDLGALAYLGSERAIAT 416
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+R K + + G +++ +WR YL+ ++S R+R V +W F RD +
Sbjct: 417 IRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFK 469
>gi|6323515|ref|NP_013586.1| NADH-ubiquinone reductase (H(+)-translocating) NDI1 [Saccharomyces
cerevisiae S288c]
gi|417349|sp|P32340.1|NDI1_YEAST RecName: Full=Rotenone-insensitive NADH-ubiquinone oxidoreductase,
mitochondrial; AltName: Full=Internal NADH
dehydrogenase; AltName: Full=NADH:ubiquinone reductase
(non-electrogenic); Flags: Precursor
gi|805022|emb|CAA89160.1| Ndi1p [Saccharomyces cerevisiae]
gi|51830478|gb|AAU09768.1| YML120C [Saccharomyces cerevisiae]
gi|256270026|gb|EEU05272.1| Ndi1p [Saccharomyces cerevisiae JAY291]
gi|285813883|tpg|DAA09778.1| TPA: NADH-ubiquinone reductase (H(+)-translocating) NDI1
[Saccharomyces cerevisiae S288c]
gi|392297143|gb|EIW08243.1| Ndi1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 513
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 195/361 (54%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + K YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL ++
Sbjct: 159 LHQAEPAEIK--YDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKAN 216
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 217 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 276
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 277 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 336
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++++L+V ++FA+GD + L
Sbjct: 337 WATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGL 389
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + N S KD E + PF Y LG++A
Sbjct: 390 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAY 449
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 450 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 508
Query: 349 I 349
Sbjct: 509 F 509
>gi|151946043|gb|EDN64274.1| NADH:ubiquinone oxidoreductase [Saccharomyces cerevisiae YJM789]
Length = 513
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 195/361 (54%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + K YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL ++
Sbjct: 159 LHQAEPAEIK--YDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKAN 216
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 217 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 276
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 277 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 336
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++++L+V ++FA+GD + L
Sbjct: 337 WATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGL 389
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + N S KD E + PF Y LG++A
Sbjct: 390 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAY 449
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 450 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 508
Query: 349 I 349
Sbjct: 509 F 509
>gi|323332226|gb|EGA73636.1| Ndi1p [Saccharomyces cerevisiae AWRI796]
Length = 468
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 192/352 (54%), Gaps = 31/352 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL +++ + E+
Sbjct: 124 EIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPER 183
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRL 139
RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F+ +L
Sbjct: 184 RRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKL 243
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGVGPST 190
YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 244 SSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARP 303
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
++ L +P+ + G ++++L+V ++FA+GD + LP AQVA +
Sbjct: 304 VITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQVAHQ 356
Query: 247 QGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYKALVD 297
+ +YL +++ + + N S KD E + PF Y LG++A +G +A+
Sbjct: 357 EAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLWFEENNFKPFKYNDLGALAYLGSERAIAT 416
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 417 IRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 467
>gi|45655611|ref|YP_003420.1| NADH dehydrogenase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|421086668|ref|ZP_15547516.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. HAI1594]
gi|421103876|ref|ZP_15564472.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|45602582|gb|AAS72057.1| NADH dehydrogenase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|410366357|gb|EKP21749.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410430697|gb|EKP75060.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. HAI1594]
Length = 422
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 180/333 (54%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ + + L +G +P ++W+ GV +++ +LD+
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQANSIAATLDVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|323307863|gb|EGA61124.1| Ndi1p [Saccharomyces cerevisiae FostersO]
Length = 468
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 195/361 (54%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + I YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL ++
Sbjct: 117 LHQAEPAE--IKYDXLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKAN 174
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 175 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 234
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 235 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 294
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++++L+V ++FA+GD + L
Sbjct: 295 WATGNKARLVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGL 347
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + N S KD E + PF Y LG++A
Sbjct: 348 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAY 407
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 408 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 466
Query: 349 I 349
Sbjct: 467 F 467
>gi|403072239|pdb|4G9K|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae
gi|403072240|pdb|4G9K|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae
gi|403072241|pdb|4GAP|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Nad+
gi|403072242|pdb|4GAP|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Nad+
gi|403072243|pdb|4GAV|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Quinone
gi|403072244|pdb|4GAV|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Quinone
Length = 471
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 195/361 (54%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + I YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL ++
Sbjct: 117 LHQAEPAE--IKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKAN 174
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 175 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 234
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 235 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 294
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++++L+V ++FA+GD + L
Sbjct: 295 WATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGL 347
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + N S KD E + PF Y LG++A
Sbjct: 348 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAY 407
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 408 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 466
Query: 349 I 349
Sbjct: 467 F 467
>gi|336367228|gb|EGN95573.1| hypothetical protein SERLA73DRAFT_186657 [Serpula lacrymans var.
lacrymans S7.3]
Length = 438
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 194/433 (44%), Gaps = 102/433 (23%)
Query: 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 73
T +P + + YDKL+IA G+ +ST G+ G+ E+ L+ + AQ IRR+++ N + +P
Sbjct: 14 TGDPQRIYLPYDKLIIACGSSSSTHGVPGL-EHCFQLKTISDAQAIRRRVMDNFETASLP 72
Query: 74 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-I 131
+ EE+ RLL VV GGGPTGVE + E+ DF D+ Y + ++ + + +I++ E I
Sbjct: 73 TTTPEERKRLLSFVVCGGGPTGVETAAEIYDFCQEDIMNYYPKICREEVSIHVIQSREHI 132
Query: 132 LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILN----DGT----EVPYGLLVW 182
L+++ + + YA + + V L+ V V ++ + DGT +P ++W
Sbjct: 133 LNTYSEAISKYAEDKFRRDHVDLITSARVSAVYPDHVVYSTRSPDGTITQHTIPTNFVLW 192
Query: 183 STGVG--PSTLVKSLDLP------------------------------------------ 198
STG+ P T S LP
Sbjct: 193 STGIAMNPFTRRVSSLLPNQVHKRAIEVDAHLRVKGAPLGDVYAIGDCATIETSIVSHLL 252
Query: 199 -------KSPGGRIGIDEW--------LRVP-------SVQDVFAVGDCSG--------- 227
K G+I DEW R+P V+ +F + D
Sbjct: 253 ELVDEADKDKNGKIDFDEWEIMVSRIKQRIPMAGAHLSKVRTLFDLYDSDADNSLTLNEL 312
Query: 228 --YLESTGK--TVLPALAQVAERQGKYL---FSLLNRIGKAGGGRANSAKDMELGDPFVY 280
L+ G T LPA AQVA +QGKYL F+ L R G A D + PF Y
Sbjct: 313 AMLLQEIGNKITALPATAQVASQQGKYLGKKFTQLARKGDVLAANDVGALDEVVSPPFRY 372
Query: 281 RHLGSMATIGRYKALVDLRQNKESKGLS-LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
HLGS+A IG A+ DL GLS + G ++ WRS Y + VS R R + ++W
Sbjct: 373 AHLGSLAYIGN-AAVFDL------GGLSFMGGLVAMYAWRSVYWSEQVSARTRALLMIDW 425
Query: 340 ATTFVFGRDISRI 352
V+GRD+S++
Sbjct: 426 IIRGVWGRDLSKL 438
>gi|418403630|ref|ZP_12977114.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti CCNWSX0020]
gi|359502387|gb|EHK74965.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti CCNWSX0020]
Length = 422
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 174/337 (51%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA + FG A L+ + A IRR++L+ ++V EE+ +
Sbjct: 97 VPYDTLVLATGATHAYFGHDEWAAVAPGLKTLEDATTIRRRVLIAFEQAEV----EEDPA 152
Query: 82 R---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFD 136
R LL ++G GPTGVE +G +++ R + + + + V L+EA IL +F
Sbjct: 153 RRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPGEFRRIDTRLARVVLVEAGPRILPAFS 212
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L YA+ +L K GV ++ G V D + + + + + VP LVW+ GV S + L
Sbjct: 213 EELSAYASRELEKLGVEVLTGTPVTDCTDEGVTIGE-SFVPSRTLVWAAGVQASPAARWL 271
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GR+ + L P D+F +GD + ++ GK V P +A A++QG Y+ ++
Sbjct: 272 GADADRAGRVKVGPDLTAPHRPDIFVIGDTASVIQEDGKPV-PGIAPAAKQQGAYVAQVI 330
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
G+ G A PF YRH GS+ATIG+ A++D + K L G L+W
Sbjct: 331 R--GRLTGSPAPG--------PFRYRHQGSLATIGKRAAIIDFGRIK------LRGSLAW 374
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA +W T++ G+ +R+
Sbjct: 375 WIWGIAHIYFLIGTRSRFAVAWSWLWTYLSGQHSARL 411
>gi|224124648|ref|XP_002319384.1| predicted protein [Populus trichocarpa]
gi|222857760|gb|EEE95307.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 146/235 (62%), Gaps = 11/235 (4%)
Query: 2 KVHCETVTDELRTLE-PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
K++C + TD+ +TL +F + YD L++A+GA+++TF GV+E+A FL+E+ AQ IR
Sbjct: 139 KIYCRS-TDQGKTLGGNEEFTMDYDVLIVAMGAKSNTFNTPGVEEHAHFLKEIEDAQNIR 197
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P ISEEE+ R++H VVVGGGP+GVE++ EL DF D+ + Y +KDY
Sbjct: 198 RSIIDCYERASLPSISEEERKRIMHFVVVGGGPSGVEYAAELHDFAHDDLAKLYPSIKDY 257
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGT 173
+ +TL+EA + IL+ FD R+ +AT + + G+ + G + K + ++++
Sbjct: 258 LRITLLEAGDHILNMFDSRITKFATEKFERDGIDVKTGSMVIKVSDKHISTKEIKTGQTV 317
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+PYG+++WSTG+ ++ G R + DEWLRV V+A+GDC+
Sbjct: 318 SIPYGMVLWSTGIATRPVIMDFMKHIGQGNRRVLATDEWLRVEGCDGVYALGDCA 372
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL S NR+ + + G PF Y+H G A +G
Sbjct: 463 LPATAQVAAQQGEYLASCFNRMEQCEKYPEGPMRFRGTGCHRFRPFRYKHFGQFAPLGGE 522
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W + Y +++VSWR R V +W +FGRD SRI
Sbjct: 523 QTAAQLPGDWISVGYST----QWL-WYAVYTSKLVSWRTRVLVVSDWLRRSIFGRDSSRI 577
>gi|423302244|ref|ZP_17280267.1| hypothetical protein HMPREF1057_03408 [Bacteroides finegoldii
CL09T03C10]
gi|408471335|gb|EKJ89867.1| hypothetical protein HMPREF1057_03408 [Bacteroides finegoldii
CL09T03C10]
Length = 439
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 173/329 (52%), Gaps = 34/329 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNFFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEANE-IL 132
LL+ V+VGGG TG+E +G LS+ +R+ DY +H+ LIEA + +L
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEM------KRFVLPNDYPDMPSSLMHIYLIEAGQRLL 213
Query: 133 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
+ + +A L + GV L+ V D K+IL DGTE+ +W +GV T+
Sbjct: 214 AGMSEDSSLHAEKFLREMGVNILLNKRVIDYRDHKVILEDGTEIATRTFIWVSGVTGVTI 273
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 250
GGRI +D++ RV + +VFA+GD C + + P LAQVA +QG+
Sbjct: 274 GNMNPSLIGRGGRIKVDQFNRVEGMDNVFAIGDQCIQSTDESYPNGHPQLAQVAIQQGEL 333
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLIRLEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
G+L+W++W +L ++ RN+ V +NW
Sbjct: 377 GWLAWVMWLVVHLRSILGVRNKVVVLLNW 405
>gi|224014907|ref|XP_002297115.1| hypothetical protein THAPSDRAFT_38312 [Thalassiosira pseudonana
CCMP1335]
gi|220968234|gb|EED86583.1| hypothetical protein THAPSDRAFT_38312 [Thalassiosira pseudonana
CCMP1335]
Length = 469
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 189/379 (49%), Gaps = 51/379 (13%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE-E 78
++SYD LV A+G + + + G KE+ L+ ++ +R + L + P + + E
Sbjct: 96 IELSYDYLVCAVGTASRSSIVPGAKEHCFNLKTSQDSKRLRTAIGEALEYASRPDVQDLE 155
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR---YSHVKDYIHVTLIEA-NEILSS 134
E+ R + VVGGGPTGVE SGEL DF + Y H++D + V LI +++L +
Sbjct: 156 ERKRRVRIAVVGGGPTGVELSGELMDFFAQVCSLNDGAYQHLRDDVSVMLIHGGSDLLPA 215
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDGTE----VPYGLLVWSTGVGP 188
D LR A L GV + + +++V + I G++ +P GL VW+ G P
Sbjct: 216 MDVDLRERALEALYNQGVEVRLNTRLQEVGRDYIKICEKGSDDVEFIPVGLTVWAAGNAP 275
Query: 189 STLVKSL--DLPKSPGG---RIGIDEWLRVPS-VQDVFA----VGDCSGY-LESTGKT-- 235
VK L LP+S G RI +D WLR P+ QD F +GD + Y ES +T
Sbjct: 276 VPFVKELLSQLPESAAGSAGRIHVDRWLRCPTRSQDTFGSIMVLGDVACYETESKYETEP 335
Query: 236 -VLPALAQVAERQGKYLFSLLNR----------IGKAGGGRANS-------AKDMELGDP 277
LP AQVA +QG + +LNR + + A+S + +E
Sbjct: 336 EPLPQTAQVAGQQGAFAARMLNRGYDMRQTPPRLPELTSSEASSLLRVWLVTRGLEEAPG 395
Query: 278 FVYRHLGSMATIGRYKALVDLRQNKESKG----LSLAGFLSWLVWRSAYLTRVVSWRNRF 333
F + LG +A IG+ +AL N+ G + +G +++ +WRS YL + S RN+
Sbjct: 396 FNFLSLGLLAYIGKEEAL-----NQVMVGNVPIFNYSGKIAFALWRSVYLAKQASSRNQA 450
Query: 334 YVAVNWATTFVFGRDISRI 352
+A +WA T FGRDI+R+
Sbjct: 451 LIAFDWARTQSFGRDITRL 469
>gi|357061673|ref|ZP_09122417.1| hypothetical protein HMPREF9332_01975 [Alloprevotella rava F0323]
gi|355373538|gb|EHG20855.1| hypothetical protein HMPREF9332_01975 [Alloprevotella rava F0323]
Length = 450
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 176/348 (50%), Gaps = 34/348 (9%)
Query: 7 TVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN 66
++ E R L+ KISY+ L+ A G + FG V+E A ++ V A +R LL N
Sbjct: 87 SIFPEQRILQTSIGKISYNYLIFAAGTTTNFFGNKDVEEEAIPMKNVSEAMGLRNALLEN 146
Query: 67 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY------ 120
+ + SE+E+ LL+ V+VGGG TGVE +G L++ + Y KDY
Sbjct: 147 FERA-LTCASEQERQELLNVVIVGGGATGVEVAGALAEM------KNYILPKDYPDMDSS 199
Query: 121 -IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPY 177
+ + LIEA N +L++ + + +A L + GV ++ +V ++ ++ L DG+ +
Sbjct: 200 LMQIYLIEAGNRLLAAMNPKNSSHAEQYLREMGVNVMLNKMVTGYENHRVQLKDGSSIAT 259
Query: 178 GLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTV 236
+W +GV + GGRI +DE+ RV + VFA+GD C +
Sbjct: 260 RTFIWVSGVAAQPVGNLGTEFLGRGGRIKVDEYNRVTGLDGVFAIGDQCLMTADEDYPNG 319
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 296
P LAQVA +QG+ L L R+ K+ EL F YR+LG+MAT+GR +A+
Sbjct: 320 HPQLAQVAIQQGRLLAKNLQRL----------EKNKEL-KAFHYRNLGAMATVGRNRAIA 368
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+ + + + GF++WL+W +L ++ RN+ V NW +V
Sbjct: 369 EFSK------IRMHGFVAWLMWLFVHLRSILGVRNKIIVLFNWIWNYV 410
>gi|147812465|emb|CAN59740.1| hypothetical protein VITISV_027064 [Vitis vinifera]
Length = 539
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 143/236 (60%), Gaps = 14/236 (5%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C + D E +F + YD LV A+GA ++TF GV EN FL+EV AQ IRR
Sbjct: 101 KVYCRSGQDTNLGGEE-EFSVDYDYLVXAMGARSNTFNTPGVVENCHFLKEVEDAQRIRR 159
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P +SEEE+ R+LH VVVGGGPTGVEF+ EL DF++ D+ + Y VK+
Sbjct: 160 TVIDCFERASLPNLSEEERKRILHFVVVGGGPTGVEFAAELHDFVLEDLAKLYPXVKNLA 219
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TL+EA + IL+ FD R+ +A + + G+ L G + K + +++ + +E
Sbjct: 220 KITLLEAGDHILNMFDKRITAFAEEKFQRDGIHLKTGSMVIKVDDKHISTKERSTGEVSE 279
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+PYG++VWSTG+G ++ +D K G + DEWLRV +++A+GDC+
Sbjct: 280 IPYGMVVWSTGIGTRPVI--MDFMKQIGQTNRRALATDEWLRVEGCNNIYALGDCA 333
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL + NR+ + + G PF Y+HLG A +G
Sbjct: 425 LPATAQVAAQQGQYLANCFNRMEECERNPEGPLRFRGTGRHRFHPFRYKHLGQFAPLGGE 484
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAY 322
+A L + S G S WL W S Y
Sbjct: 485 QAAAQLPGDWVSIGQS----TQWL-WYSVY 509
>gi|398338347|ref|ZP_10523050.1| NADH dehydrogenase [Leptospira kirschneri serovar Bim str. 1051]
gi|418679636|ref|ZP_13240897.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418740300|ref|ZP_13296678.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|400320078|gb|EJO67951.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410752304|gb|EKR09279.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 422
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ Q + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINEQGVQL-EGKMIPTQTVIWAAGVQANSIASTLGTTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|46579576|ref|YP_010384.1| pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio
vulgaris str. Hildenborough]
gi|387152941|ref|YP_005701877.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Desulfovibrio vulgaris RCH1]
gi|46448991|gb|AAS95643.1| pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233385|gb|ADP86239.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Desulfovibrio vulgaris RCH1]
Length = 439
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 164/329 (49%), Gaps = 25/329 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
I YD LV+A G+ + FG+ G +E++ L+ + A +R +++ + + E
Sbjct: 94 LDIPYDYLVVAAGSRTAYFGVPGAEEHSFSLKTLEEAVCLRNQIISCFEQAALESDPERR 153
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFDD 137
++ +L VVGGGPTGVE++G L++ + +R+ + + + + V L+EA +L F +
Sbjct: 154 RA-MLTFTVVGGGPTGVEYAGALAELVRAPLRKDFPELDMNEVRVVLLEAAPGVLGGFPE 212
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
RLR YA +L GV + + V +V + ++ G +P +VW+ GV + + +
Sbjct: 213 RLRGYAKKRLGAMGVDVRLDASVAEVTAAGVLFASGEHLPTHTVVWTAGVRGEVVAEHMG 272
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
LP GGR+ + L+V + +VF VGD S P Q + + ++L
Sbjct: 273 LPLGRGGRVAVLSTLQVEGLPEVFVVGDMSLPEGQNPPMNAPNATQQGRLAAENILAMLQ 332
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R PF YR G+MATIGR A+V + + +GFL+WL
Sbjct: 333 RRDPV---------------PFRYRDKGAMATIGRQAAVVRM------GNFAFSGFLAWL 371
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+W +L ++ +RNR V +NWA ++F
Sbjct: 372 LWLFVHLAYLIGFRNRLIVLINWAWDYLF 400
>gi|336379947|gb|EGO21101.1| hypothetical protein SERLADRAFT_475816 [Serpula lacrymans var.
lacrymans S7.9]
Length = 533
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 194/433 (44%), Gaps = 102/433 (23%)
Query: 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 73
T +P + + YDKL+IA G+ +ST G+ G+ E+ L+ + AQ IRR+++ N + +P
Sbjct: 109 TGDPQRIYLPYDKLIIACGSSSSTHGVPGL-EHCFQLKTISDAQAIRRRVMDNFETASLP 167
Query: 74 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-I 131
+ EE+ RLL VV GGGPTGVE + E+ DF D+ Y + ++ + + +I++ E I
Sbjct: 168 TTTPEERKRLLSFVVCGGGPTGVETAAEIYDFCQEDIMNYYPKICREEVSIHVIQSREHI 227
Query: 132 LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILN----DGT----EVPYGLLVW 182
L+++ + + YA + + V L+ V V ++ + DGT +P ++W
Sbjct: 228 LNTYSEAISKYAEDKFRRDHVDLITSARVSAVYPDHVVYSTRSPDGTITQHTIPTNFVLW 287
Query: 183 STGVG--PSTLVKSLDLP------------------------------------------ 198
STG+ P T S LP
Sbjct: 288 STGIAMNPFTRRVSSLLPNQVHKRAIEVDAHLRVKGAPLGDVYAIGDCATIETSIVSHLL 347
Query: 199 -------KSPGGRIGIDEW--------LRVP-------SVQDVFAVGDCSG--------- 227
K G+I DEW R+P V+ +F + D
Sbjct: 348 ELVDEADKDKNGKIDFDEWEIMVSRIKQRIPMAGAHLSKVRTLFDLYDSDADNSLTLNEL 407
Query: 228 --YLESTGK--TVLPALAQVAERQGKYL---FSLLNRIGKAGGGRANSAKDMELGDPFVY 280
L+ G T LPA AQVA +QGKYL F+ L R G A D + PF Y
Sbjct: 408 AMLLQEIGNKITALPATAQVASQQGKYLGKKFTQLARKGDVLAANDVGALDEVVSPPFRY 467
Query: 281 RHLGSMATIGRYKALVDLRQNKESKGLS-LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
HLGS+A IG A+ DL GLS + G ++ WRS Y + VS R R + ++W
Sbjct: 468 AHLGSLAYIGN-AAVFDL------GGLSFMGGLVAMYAWRSVYWSEQVSARTRALLMIDW 520
Query: 340 ATTFVFGRDISRI 352
V+GRD+S++
Sbjct: 521 IIRGVWGRDLSKL 533
>gi|421088152|ref|ZP_15548981.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. 200802841]
gi|410003408|gb|EKO53853.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. 200802841]
Length = 422
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ Q + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINEQGVQL-EGKMIPTQTVIWAAGVQANSIASTLGTTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|423341343|ref|ZP_17319058.1| hypothetical protein HMPREF1077_00488 [Parabacteroides johnsonii
CL02T12C29]
gi|409221351|gb|EKN14301.1| hypothetical protein HMPREF1077_00488 [Parabacteroides johnsonii
CL02T12C29]
Length = 431
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 177/336 (52%), Gaps = 22/336 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD L+IA G + FG +++ A ++ + A +R LL N + + + +EK
Sbjct: 101 ELKYDYLIIASGTVTNFFGNEVIEKQALPMKTIEEALILRNTLLSNFEKATI-CTNPKEK 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDR 138
L++ V+VGGG TGVE SG L++ + + Y +K +++ L+E++ +L++ +
Sbjct: 160 QALMNIVIVGGGATGVEISGVLAEMKHFVLPKDYPDLKQSEMNIFLVESSPHLLAAMSEE 219
Query: 139 LRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A + L GV+++ + V D K+IL+DG + +VW +GV + + +
Sbjct: 220 ASVHAKSFLEGMGVKVILQKKVIDYKEGKVILDDGNSIETKTVVWVSGVTATRFEQIENK 279
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GGRI ++E+ ++P Q+VFA+GD E+ P +AQVA +QG L L R
Sbjct: 280 ELGRGGRILVNEYNQLPGFQNVFAIGDVCLQTETNYPNGHPQVAQVAIQQGILLADNLKR 339
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ K E PF Y++LG++AT+GR KA+ DL + + L GF +WLV
Sbjct: 340 LEKG-----------ETLKPFHYKNLGTLATVGRNKAVADLHK------IKLHGFFAWLV 382
Query: 318 WRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
W +L ++ +N+ V + W + F + + I I
Sbjct: 383 WMGVHLRSILGVKNKIMVLIEWVWSYFTYDQSIRLI 418
>gi|296084968|emb|CBI28383.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 143/234 (61%), Gaps = 10/234 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C + D E +F + YD LVIA+GA ++TF GV EN FL+EV AQ IRR
Sbjct: 137 KVYCRSGQDTNLGGEE-EFSVDYDYLVIAMGARSNTFNTPGVVENCHFLKEVEDAQRIRR 195
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P +SEEE+ R+LH VVVGGGPTGVEF+ EL DF++ D+ + Y VK+
Sbjct: 196 TVIDCFERASLPNLSEEERKRILHFVVVGGGPTGVEFAAELHDFVLEDLAKLYPSVKNLA 255
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TL+EA + IL+ FD R+ +A + + G+ L G + K + +++ + +E
Sbjct: 256 KITLLEAGDHILNMFDKRITAFAEEKFQRDGIHLKTGSMVIKVDDKHISTKERSTGEVSE 315
Query: 175 VPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+P+G++VWSTG+G ++ + ++ + DEWLRV +++A+GDC+
Sbjct: 316 IPFGMVVWSTGIGTRPVIMDFMNQIGQTNRRALATDEWLRVEGCNNIYALGDCA 369
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL + NR+ + + G PF Y+HLG A +G
Sbjct: 461 LPATAQVAAQQGQYLANCFNRMEECERNPEGPLRFRGTGRHRFHPFRYKHLGQFAPLGGE 520
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 521 QAAAQLPGDWVSIGQST----QWL-WYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI 575
>gi|349580169|dbj|GAA25329.1| K7_Ndi1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 513
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 194/361 (53%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + K YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL ++
Sbjct: 159 LHQAEPAEIK--YDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKAN 216
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 217 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 276
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 277 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 336
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ G ++++L+V ++FA+GD + L
Sbjct: 337 WATGNKARPVITDLFKKIPEQNSSTRGLAVNDFLQVKGSNNIFAIGDNAF-------AGL 389
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + N S KD E + PF Y LG++A
Sbjct: 390 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAY 449
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 450 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 508
Query: 349 I 349
Sbjct: 509 F 509
>gi|168027288|ref|XP_001766162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682594|gb|EDQ69011.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 128/217 (58%), Gaps = 9/217 (4%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LV+A+GA +TF GV E FL+EV+ A++I++ +L + +P + EE
Sbjct: 125 EFALQYDYLVVAVGATTNTFDTKGVLEYCHFLKEVYDAEKIKKSILTCFESASLPHVKEE 184
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
+ +LL V+VGGGPTGVEF+ EL DFI D+ Y H+ + + +TL+++ + IL+++D+
Sbjct: 185 VRKKLLSFVIVGGGPTGVEFAAELHDFIHDDLLNLYPHLHNDVKITLVQSGDHILNTYDE 244
Query: 138 RLRHYATTQLSKSGVRLVRGI------VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
R+ YA + ++ G+ + G +D + +PYG++VWSTG+G +
Sbjct: 245 RISKYAEQKFTREGIHVNTGCRVLGVQAGAIDFKIKSTGQLVNLPYGMIVWSTGIGTRPV 304
Query: 192 VKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+ + ++ + DEWLR+ + + F +GDC+
Sbjct: 305 IADFMSQIEQNDRRVLATDEWLRIKNCEGTFGIGDCA 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG-------DPFVYRHLGSMATI 289
+PA AQVA +QG+YL N + M + PF Y+HLG A +
Sbjct: 435 MPATAQVAAQQGEYLAHCFNHMTAEVASHMAPEGPMRIRGKGRHRFQPFQYQHLGQFAPL 494
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G KA +L + S G S WL W S Y ++ VSWR R V +W FGRD
Sbjct: 495 GGEKAAYELPGDWVSIGRST----QWL-WYSVYASKQVSWRTRTLVVFDWTKRMFFGRDS 549
Query: 350 SRI 352
SR+
Sbjct: 550 SRV 552
>gi|225447635|ref|XP_002274523.1| PREDICTED: rotenone-insensitive NADH-ubiquinone oxidoreductase,
mitochondrial-like [Vitis vinifera]
Length = 574
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 143/234 (61%), Gaps = 10/234 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C + D E +F + YD LVIA+GA ++TF GV EN FL+EV AQ IRR
Sbjct: 136 KVYCRSGQDTNLGGEE-EFSVDYDYLVIAMGARSNTFNTPGVVENCHFLKEVEDAQRIRR 194
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P +SEEE+ R+LH VVVGGGPTGVEF+ EL DF++ D+ + Y VK+
Sbjct: 195 TVIDCFERASLPNLSEEERKRILHFVVVGGGPTGVEFAAELHDFVLEDLAKLYPSVKNLA 254
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TL+EA + IL+ FD R+ +A + + G+ L G + K + +++ + +E
Sbjct: 255 KITLLEAGDHILNMFDKRITAFAEEKFQRDGIHLKTGSMVIKVDDKHISTKERSTGEVSE 314
Query: 175 VPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+P+G++VWSTG+G ++ + ++ + DEWLRV +++A+GDC+
Sbjct: 315 IPFGMVVWSTGIGTRPVIMDFMNQIGQTNRRALATDEWLRVEGCNNIYALGDCA 368
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL + NR+ + + G PF Y+HLG A +G
Sbjct: 460 LPATAQVAAQQGQYLANCFNRMEECERNPEGPLRFRGTGRHRFHPFRYKHLGQFAPLGGE 519
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 520 QAAAQLPGDWVSIGQST----QWL-WYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI 574
>gi|18412775|ref|NP_567283.1| NAD(P)H dehydrogenase B2 [Arabidopsis thaliana]
gi|75332084|sp|Q94BV7.1|NDB2_ARATH RecName: Full=NAD(P)H dehydrogenase B2, mitochondrial; Flags:
Precursor
gi|14532464|gb|AAK63960.1| AT4g05020/T32N4_4 [Arabidopsis thaliana]
gi|25090208|gb|AAN72252.1| At4g05020/T32N4_4 [Arabidopsis thaliana]
gi|332657060|gb|AEE82460.1| NAD(P)H dehydrogenase B2 [Arabidopsis thaliana]
Length = 582
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 143/234 (61%), Gaps = 11/234 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C + L + +F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR+
Sbjct: 142 KVYCRS-KQGLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRK 200
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + + +P +S+EE+ R+LH VVVGGGPTGVEF+ EL DF+ D+ Y K +
Sbjct: 201 TVIDSFEKASLPELSDEERKRILHFVVVGGGPTGVEFAAELHDFVTEDLVSLYPRAKGSV 260
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TL+E A+ IL+ FD R+ +A + S+ G+ + G + KD+ S K + +
Sbjct: 261 RITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKLGSMVTKVNEKDI-SAKTKGGEVSS 319
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+PYG++VWSTG+G ++K G R + DEWLRV +++A+GDC+
Sbjct: 320 IPYGMIVWSTGIGTRPVIKDFMKQIGQGNRRALATDEWLRVEGTDNIYALGDCA 373
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL +R+ + + G PF YRHLG A +G
Sbjct: 468 LPATAQVAAQQGAYLAKCFDRMEECEKSPEGPIRMRGEGRHRFRPFRYRHLGQFAPLGGE 527
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 528 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSSI 582
>gi|5732076|gb|AAD48975.1|AF162444_7 contains similarity to Pfam family PF00070 - Pyridine
nucleotide-disulphide oxidoreductase class-I;
score=26.1, E=0.0008, N=1 [Arabidopsis thaliana]
gi|7267261|emb|CAB81044.1| AT4g05020 [Arabidopsis thaliana]
Length = 583
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 143/234 (61%), Gaps = 11/234 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C + L + +F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR+
Sbjct: 143 KVYCRS-KQGLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRK 201
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + + +P +S+EE+ R+LH VVVGGGPTGVEF+ EL DF+ D+ Y K +
Sbjct: 202 TVIDSFEKASLPELSDEERKRILHFVVVGGGPTGVEFAAELHDFVTEDLVSLYPRAKGSV 261
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TL+E A+ IL+ FD R+ +A + S+ G+ + G + KD+ S K + +
Sbjct: 262 RITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKLGSMVTKVNEKDI-SAKTKGGEVSS 320
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+PYG++VWSTG+G ++K G R + DEWLRV +++A+GDC+
Sbjct: 321 IPYGMIVWSTGIGTRPVIKDFMKQIGQGNRRALATDEWLRVEGTDNIYALGDCA 374
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL +R+ + + G PF YRHLG A +G
Sbjct: 469 LPATAQVAAQQGAYLAKCFDRMEECEKSPEGPIRMRGEGRHRFRPFRYRHLGQFAPLGGE 528
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 529 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSSI 583
>gi|297809693|ref|XP_002872730.1| hypothetical protein ARALYDRAFT_911770 [Arabidopsis lyrata subsp.
lyrata]
gi|297318567|gb|EFH48989.1| hypothetical protein ARALYDRAFT_911770 [Arabidopsis lyrata subsp.
lyrata]
Length = 583
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 143/234 (61%), Gaps = 11/234 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C + L + +F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR+
Sbjct: 143 KVYCRS-KQGLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRK 201
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + + +P +S+EE+ R+LH VVVGGGPTGVEF+ EL DF+ D+ Y K +
Sbjct: 202 TVIDSFEKASLPELSDEERKRILHFVVVGGGPTGVEFAAELHDFVTEDLVSLYPRAKGSV 261
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TL+E A+ IL+ FD R+ +A + S+ G+ + G + KD+ S K + +
Sbjct: 262 RITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKLGSMVTKVNEKDI-SAKTKGGEVSS 320
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+PYG++VWSTG+G ++K G R + DEWLRV +++A+GDC+
Sbjct: 321 IPYGMIVWSTGIGTRPVIKDFMKQIGQGNRRALATDEWLRVEGTDNIYALGDCA 374
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL +R+ + G PF YRHLG A +G
Sbjct: 469 LPATAQVAAQQGAYLAKCFDRMEDCEKNPEGPIRMRGEGRHRFRPFRYRHLGQFAPLGGE 528
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 529 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSSI 583
>gi|281420864|ref|ZP_06251863.1| putative NADH dehydrogenase, FAD-containing subunit [Prevotella
copri DSM 18205]
gi|281405156|gb|EFB35836.1| putative NADH dehydrogenase, FAD-containing subunit [Prevotella
copri DSM 18205]
Length = 466
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 177/350 (50%), Gaps = 34/350 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
KI YD LV A G + +G +++ A ++ V A +R +L NL + + +EEE+
Sbjct: 101 KIEYDYLVFAAGTTTNFYGNANIEKWAIPMKTVSEAMGLRNAVLSNLERA-LTCATEEER 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NEIL 132
LL+ V+VGGG TGVE +G LS+ +RY DY +H+ L+EA + +L
Sbjct: 160 QELLNVVIVGGGATGVEIAGALSEM------KRYVIPYDYPDMDSSLMHIYLLEAGDRLL 213
Query: 133 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVG--PS 189
+ A L+ GV + G +V D K+++ DG E+P +W +GV P
Sbjct: 214 AGMSQDSSKKAYEFLTSMGVDVQFGKMVTDYKDHKVLMKDGQEIPTRTFLWVSGVKAQPI 273
Query: 190 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQG 248
T + L + G RI +DE+ R+P + +FA+GD C + P LAQVA +Q
Sbjct: 274 TGIDGDHLGR--GFRIVVDEFNRIPGMDGLFAIGDQCIQTTDPAYPGGHPQLAQVAIQQA 331
Query: 249 KYLFSLLNRIGKAG------GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
L + +I KA G + D +L PF Y++LGSMATIGR KA+V+L +
Sbjct: 332 ALLAKNIQKIAKADEENEKHPGSSAQNIDQQL-KPFRYKNLGSMATIGRNKAVVELGK-- 388
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
GF +W++W +L ++ +N+ V +NW +V D R+
Sbjct: 389 ----FHSQGFFAWVLWLVVHLRSILGVKNKVMVMLNWLWKYVSYNDSIRM 434
>gi|15965832|ref|NP_386185.1| NADH dehydrogenase transmembrane protein [Sinorhizobium meliloti
1021]
gi|334316774|ref|YP_004549393.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti AK83]
gi|384529964|ref|YP_005714052.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti BL225C]
gi|384535696|ref|YP_005719781.1| putative NADH dehydrogenase transmembrane protein [Sinorhizobium
meliloti SM11]
gi|407721109|ref|YP_006840771.1| NADH dehydrogenase transmembrane protein [Sinorhizobium meliloti
Rm41]
gi|433613860|ref|YP_007190658.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium meliloti
GR4]
gi|15075101|emb|CAC46658.1| Putative NADH dehydrogenase transmembrane protein [Sinorhizobium
meliloti 1021]
gi|333812140|gb|AEG04809.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti BL225C]
gi|334095768|gb|AEG53779.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti AK83]
gi|336032588|gb|AEH78520.1| putative NADH dehydrogenase transmembrane protein [Sinorhizobium
meliloti SM11]
gi|407319341|emb|CCM67945.1| NADH dehydrogenase transmembrane protein [Sinorhizobium meliloti
Rm41]
gi|429552050|gb|AGA07059.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium meliloti
GR4]
Length = 422
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 174/337 (51%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA + FG A L+ + A IRR++L+ ++V EE+ +
Sbjct: 97 IPYDTLVLATGATHAYFGHDEWAAVAPGLKTLEDATTIRRRVLIAFEQAEV----EEDTA 152
Query: 82 R---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFD 136
R LL ++G GPTGVE +G +++ R + + + + V L+EA IL +F
Sbjct: 153 RRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPGEFRRIDTRLARVVLVEAGPRILPAFS 212
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L YA+ +L K GV ++ G V D + + + + + VP LVW+ GV S + +
Sbjct: 213 EELSAYASRELEKLGVEVLTGTPVTDCTDEGVTIGE-SFVPSRTLVWAAGVQASPAARWV 271
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GR+ + L P D+F +GD + ++ GK V P +A A++QG Y+ ++
Sbjct: 272 GADADRAGRVKVGPDLTAPHHPDIFVIGDTASVIQEDGKPV-PGIAPAAKQQGAYVAQVI 330
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
G+ G A PF YRH GS+ATIG+ A++D + K L G L+W
Sbjct: 331 R--GRLTGSPAPG--------PFRYRHQGSLATIGKRAAIIDFGRIK------LRGSLAW 374
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA +W T++ G+ +R+
Sbjct: 375 WIWGIAHIYFLIGTRSRFAVAWSWLWTYLSGQHSARL 411
>gi|218264304|ref|ZP_03478161.1| hypothetical protein PRABACTJOHN_03852 [Parabacteroides johnsonii
DSM 18315]
gi|218222141|gb|EEC94791.1| hypothetical protein PRABACTJOHN_03852 [Parabacteroides johnsonii
DSM 18315]
Length = 330
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L+IA G + FG +++ A ++ + A +R LL N + + + +EK
Sbjct: 1 MKYDYLIIASGTVTNFFGNEVIEKQALPMKTIEEALILRNTLLSNFEKATI-CTNPKEKQ 59
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L++ V+VGGG TGVE SG L++ + + Y +K +++ L+E + +L++ +
Sbjct: 60 ALMNIVIVGGGATGVEISGVLAEMKHFVLPKDYPDLKQSEMNIFLVEGSPHLLAAMSEEA 119
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+A + L GV+++ + V D K+IL+DG + +VW +GV + + +
Sbjct: 120 SVHAKSFLEGMGVKVILQKKVIDYKEGKVILDDGNSIETKTVVWVSGVTATQFEQIENKE 179
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GGRI ++E+ ++P Q+VFA+GD E+ P +AQVA +QG L L R+
Sbjct: 180 LGRGGRILVNEYNQLPGSQNVFAIGDVCLQTETNYPNGHPQVAQVAIQQGILLADNLKRL 239
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
K E PF Y++LG++AT+GR KA+ DL + + L GF +WLVW
Sbjct: 240 EKG-----------ETLKPFHYKNLGTLATVGRNKAVADLHK------IKLHGFFAWLVW 282
Query: 319 RSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
+L ++ +N+ V + W + F + + I I
Sbjct: 283 MGVHLRSILGVKNKIMVLIEWVWSYFTYDQSIRLI 317
>gi|334186370|ref|NP_001190678.1| NAD(P)H dehydrogenase B2 [Arabidopsis thaliana]
gi|332657061|gb|AEE82461.1| NAD(P)H dehydrogenase B2 [Arabidopsis thaliana]
Length = 619
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 143/234 (61%), Gaps = 11/234 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C + L + +F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR+
Sbjct: 142 KVYCRS-KQGLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRK 200
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + + +P +S+EE+ R+LH VVVGGGPTGVEF+ EL DF+ D+ Y K +
Sbjct: 201 TVIDSFEKASLPELSDEERKRILHFVVVGGGPTGVEFAAELHDFVTEDLVSLYPRAKGSV 260
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TL+E A+ IL+ FD R+ +A + S+ G+ + G + KD+ S K + +
Sbjct: 261 RITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKLGSMVTKVNEKDI-SAKTKGGEVSS 319
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+PYG++VWSTG+G ++K G R + DEWLRV +++A+GDC+
Sbjct: 320 IPYGMIVWSTGIGTRPVIKDFMKQIGQGNRRALATDEWLRVEGTDNIYALGDCA 373
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 65/158 (41%), Gaps = 48/158 (30%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-----------GGGR-------------------- 265
LPA AQVA +QG YL +R+ + G GR
Sbjct: 468 LPATAQVAAQQGAYLAKCFDRMEECEKSPEGPIRMRGEGRHRFRPFRIWKLRGISKTLSQ 527
Query: 266 ---ANSAKD------MELGDPFV--YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
+ A D MEL P++ YRHLG A +G + L + S G S
Sbjct: 528 DTTESCALDHKGVGKMEL-IPYIIRYRHLGQFAPLGGEQTAAQLPGDWVSIGHSS----Q 582
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 583 WL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSSI 619
>gi|258652530|ref|YP_003201686.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nakamurella multipartita DSM 44233]
gi|258555755|gb|ACV78697.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nakamurella multipartita DSM 44233]
Length = 445
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 162/325 (49%), Gaps = 25/325 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L+IA GA + FG G +EN+ + A +R K+ NL + E+
Sbjct: 120 LHYDYLIIATGATTNYFGTKGAQENSLAIYTRAQALRLRDKIFTNLEHAAAANTEED--- 176
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFDDRL 139
L VVVG GPTGVE +G L++ + Y + H+ L+E ++++L+ F L
Sbjct: 177 --LAIVVVGAGPTGVEMAGALAELRNDAMATVYPELDPRRTHIVLVEMSDKVLAPFAPPL 234
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
R +A L + GV L + V +V ++L G + G++VW+TGV VK LP
Sbjct: 235 RDFAARALRERGVELRLNTSVAEVRPDGVVLGGGEFLKAGVVVWATGVTVPAAVKDWGLP 294
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI +D+ LRV +++FAVGD + E + PAL Q + GK + +L+
Sbjct: 295 QGRGGRITVDKDLRVTGFKNIFAVGDIALLPEPLPQLAQPAL-QGGQHAGKQVVALI--- 350
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
GR PF Y G+MAT+GR A+ D+ Q + + + L G L+WL W
Sbjct: 351 ----AGRPTH--------PFHYHDKGTMATVGRRAAIADI-QLIKGRSIRLTGTLAWLAW 397
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTF 343
++ ++ RNR VN T +
Sbjct: 398 LFVHIVMLLGNRNRLATFVNLTTKY 422
>gi|255567411|ref|XP_002524685.1| NADH dehydrogenase, putative [Ricinus communis]
gi|223536046|gb|EEF37704.1| NADH dehydrogenase, putative [Ricinus communis]
Length = 580
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 146/235 (62%), Gaps = 12/235 (5%)
Query: 2 KVHCE-TVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KV+C T + L E +F + YD LVIA+GA +TF GV E+ FL+EV AQ+IR
Sbjct: 140 KVYCRSTQNNNLNGKE--EFAVEYDYLVIAMGARPNTFNTPGVVEHCNFLKEVEDAQKIR 197
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + + +P +S+EE+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y KD+
Sbjct: 198 RNVIDSFEKASLPNLSDEERKRILHFVVVGGGPTGVEFAAELHDFVNEDLVKLYPAAKDF 257
Query: 121 IHVTLIE-ANEILSSFDDRLRHYATTQLSKSG--VRLVRGIVKDVD---SQKLILN-DGT 173
+ +TL+E A+ IL FD R+ +A + + G V+L +VK D S K+ N + +
Sbjct: 258 VKITLLEAADHILGMFDKRITEFAEEKFRRDGIDVKLGSMVVKVSDKEISTKVRGNGETS 317
Query: 174 EVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+PYG++VWSTG+G +++ + ++ + DEWLRV DV+A+GDC+
Sbjct: 318 SIPYGMVVWSTGIGTHPVIRDFMGQVGQTNRRALATDEWLRVEGCNDVYALGDCA 372
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL + NR+ +A + G PF Y+HLG A +G
Sbjct: 466 LPATAQVASQQGTYLATCFNRMEEAEKNPEGPLRFRGEGRHRFRPFRYKHLGQFAPLGGE 525
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 526 QTAAQLPGDWVSIGHST----QWL-WYSVYASKQVSWRTRALVVTDWTRRFIFGRDSSRI 580
>gi|336397736|ref|ZP_08578536.1| NADH dehydrogenase (ubiquinone) [Prevotella multisaccharivorax DSM
17128]
gi|336067472|gb|EGN56106.1| NADH dehydrogenase (ubiquinone) [Prevotella multisaccharivorax DSM
17128]
Length = 451
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 171/336 (50%), Gaps = 37/336 (11%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
KISYD LV A GA + FG V+E A +R + A +R LL NL + + +EEE+
Sbjct: 101 KISYDHLVFAAGATTNFFGNKDVEEWAIPMRTMSEAMGLRNALLSNLERA-MTCATEEER 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NEIL 132
LL+ V+VGGG TGVE +G +S+ +RY DY +H+ L+EA + +L
Sbjct: 160 QELLNIVIVGGGATGVEIAGAISEM------KRYVIPNDYPDMDASHMHIYLLEAGDRLL 213
Query: 133 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGV--GPS 189
+ A T L GV + G +V D ++++ DGT + +W +G+ P
Sbjct: 214 AGMSKESSDKALTFLKSMGVDVQFGKMVTDYRDFRVMIKDGTSIATRTFLWVSGIRAQPI 273
Query: 190 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQG 248
T + L + G RI +DE+ RV + +FA+GD C ++ P LAQVA +Q
Sbjct: 274 TGIDGDRLGR--GFRINVDEYNRVQGLDGIFAIGDQCLMTADAAYPKGHPQLAQVAIQQA 331
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+ L L +I D L PF Y+ LGSMATIGR KA+ D+ + +
Sbjct: 332 RLLAQNLRKIDHG---------DASL-TPFHYKDLGSMATIGRNKAVADIGK------IH 375
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GF++WL+W +L ++ RN+ V + WA ++
Sbjct: 376 TQGFIAWLLWLVVHLRSILGVRNKLVVMLTWAWQYI 411
>gi|86358364|ref|YP_470256.1| NADH dehydrogenase [Rhizobium etli CFN 42]
gi|86282466|gb|ABC91529.1| NADH dehydrogenase protein [Rhizobium etli CFN 42]
Length = 421
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 32/341 (9%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGIS 76
+ YD LV+A GA + FG + A L+ + A IRR++LL +++ P I
Sbjct: 94 MTLGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMEADPAI- 152
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSG---ELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL 132
+ LL +VG GPTGVE +G EL+ F + D + K V L+EA +L
Sbjct: 153 ---RDALLTFTIVGAGPTGVELAGIIAELAHFTLPDEFRNIDTRK--TRVVLVEAGPRVL 207
Query: 133 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
+F + L YA L K GV ++ G V + + + + + T +P +VW+ GV S
Sbjct: 208 PTFAEELSAYAQKALEKLGVEVLLGKPVTECAADGVQIGE-TFIPSRTIVWAAGVTASPA 266
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+ L++P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+
Sbjct: 267 ARWLNVPADRAGRVVVEKDLSAPGLPDVFVIGDTASVMRDNGKPV-PGIAPAAKQQGAYV 325
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
++ + G A + PF YRH GS+ATIG+ A++D Q K L G
Sbjct: 326 AKVIR--ARLSGKPAPA--------PFKYRHQGSLATIGKSAAIIDFGQIK------LKG 369
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+++W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 370 WIAWWIWGIAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|295135234|ref|YP_003585910.1| NADH dehydrogenase [Zunongwangia profunda SM-A87]
gi|294983249|gb|ADF53714.1| putative NADH dehydrogenase [Zunongwangia profunda SM-A87]
Length = 451
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 170/345 (49%), Gaps = 25/345 (7%)
Query: 4 HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
E + + T+ K +SYD LV+A G + FG+ V EN+ ++++ + IR +
Sbjct: 102 EVEEIQPDSNTILTNKGSVSYDYLVLATGTTTNFFGMDSVAENSLRMKDIRDSLNIRHMM 161
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-H 122
L NL + + ++E+ L + V+VGGGP GVE +G L++F + + Y I +
Sbjct: 162 LQNLEQAAIT-CDDKERDALTNFVIVGGGPAGVEMAGALAEFCKYILPKDYPEYPSSIMN 220
Query: 123 VTLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLL 180
+ LIEA +E+L + D+ L V+ L+ V + D ++ G + L
Sbjct: 221 IYLIEAIDELLGTMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGNEVTTKSGKTILAKNL 280
Query: 181 VWSTGVGPSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+W+ GV +D G RI D L+V +++FA+GD + + P
Sbjct: 281 IWTAGV-KGQFPNGIDEKHIVRGNRIKTDANLKVEGYENIFAIGDIAALISKETPKGHPQ 339
Query: 240 LAQVAERQGKYL-FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+AQ A +QGKYL S+LN I S K PF Y+ GS+AT+G+ KA+ DL
Sbjct: 340 VAQTAIQQGKYLGDSILNIINN------KSIK------PFKYKDKGSLATVGKRKAVADL 387
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ K AG+ +WL+W +L + +RNR V NWA ++
Sbjct: 388 GKFK------FAGYFAWLLWSVVHLMSISGFRNRLMVGFNWAVSY 426
>gi|290978850|ref|XP_002672148.1| predicted protein [Naegleria gruberi]
gi|284085722|gb|EFC39404.1| predicted protein [Naegleria gruberi]
Length = 602
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 205/414 (49%), Gaps = 90/414 (21%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YDKLVIA+G++ ++FG+ GV + + +++ HA +IR KLL L + +P +++EE
Sbjct: 196 FELKYDKLVIAVGSQPNSFGVKGVDQYSVPMKQPEHAVKIREKLLDVLESACMPNLTDEE 255
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEANE-ILSSFDD 137
+ + L VVVGGG G+E G L DF+ D+ + + + + + +T+I +++ IL+++D
Sbjct: 256 RQKALSVVVVGGGHAGIETLGYLVDFVKEDISKLFPKDIVEKLKITVIHSSDHILNTYDC 315
Query: 138 RLRHYATTQLS------KSGVRLVRGIVKDV-----DSQKLILNDGTEVPYGLLVWSTGV 186
++ + K+ R+V D+ D QK ++ +P+G+ +W+TGV
Sbjct: 316 KISEMCEKEFIFNNVDLKTNARVVEVRENDLVVVFKDQQK--KSEPVSLPFGVCIWTTGV 373
Query: 187 GPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCS------------GYLES 231
LVK L ++ K + + +D L+V + +V+A+GDCS + E
Sbjct: 374 AQVPLVKKLAENIYKQKNEKSLVVDAHLQVVGLNNVYAIGDCSKIDQPKLVQKYESFFEQ 433
Query: 232 T--------GKTVLPALAQVAERQG----------KYLF-----------------SLLN 256
T + +L + E++ K LF SL+
Sbjct: 434 ADINKDGVISFTEMESLIKAKEKEYPNFATINQKLKKLFTQADVNGDNVLSKDEFKSLIQ 493
Query: 257 RI---------------GKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRYKALVD 297
RI K G N D+E G PF Y++LGS A IG A+ D
Sbjct: 494 RIDNEYYAPLPQTAQVASKQGSYLGNCLNDIEKGITYVPPFTYKNLGSFAYIGNNHAVAD 553
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
L G ++ + ++ ++R+AYL++ VSW+NRF +A +W T +FGRD+SR
Sbjct: 554 LS------GTTVTSWQAFYLYRAAYLSKQVSWKNRFSLASDWVKTAIFGRDVSR 601
>gi|86141966|ref|ZP_01060490.1| putative NADH dehydrogenase [Leeuwenhoekiella blandensis MED217]
gi|85831529|gb|EAQ49985.1| putative NADH dehydrogenase [Leeuwenhoekiella blandensis MED217]
Length = 451
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 170/345 (49%), Gaps = 25/345 (7%)
Query: 4 HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
E + + T+ K +SYD LV+A G + FG+ V EN+ ++++ + IR +
Sbjct: 102 EVEEIQPDSNTILTNKGSVSYDYLVLATGTTTNFFGMDSVAENSLGMKDIRDSLNIRHMM 161
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-H 122
L NL + + ++E+ L + V+VGGGP GVE +G L++F + + Y I +
Sbjct: 162 LQNLEQAAIT-CDDKERDALTNFVIVGGGPAGVEMAGALAEFCKYILPKDYPEYPSSIMN 220
Query: 123 VTLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLL 180
+ LIEA +E+L + D+ L V+ L+ V + D ++ G + L
Sbjct: 221 IYLIEAIDELLGTMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGNEVTTKSGKTILAKNL 280
Query: 181 VWSTGVGPSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+W+ GV +D G RI D L+V +++FA+GD + + P
Sbjct: 281 IWTAGV-KGQFPNGIDEKHIVRGNRIKTDANLKVEGYENIFAIGDIAALISKETPKGHPQ 339
Query: 240 LAQVAERQGKYL-FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+AQ A +QGKYL S+LN I S K PF Y+ GS+AT+G+ KA+ DL
Sbjct: 340 VAQTAIQQGKYLGDSILNIINN------KSIK------PFKYKDKGSLATVGKRKAVADL 387
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ K AG+ +WL+W +L + +RNR V NWA ++
Sbjct: 388 GKFK------FAGYFAWLLWSVVHLMSISGFRNRLMVGFNWAVSY 426
>gi|325106392|ref|YP_004276046.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pedobacter saltans DSM 12145]
gi|324975240|gb|ADY54224.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pedobacter saltans DSM 12145]
Length = 426
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 168/337 (49%), Gaps = 27/337 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K+SYD LV A G E + FG+ VK NA ++ + A +R LL L + + +EEK
Sbjct: 96 KLSYDYLVFATGTETNYFGLENVKNNAIPMKTLDDALLMRNILLERLEKATI-AEDQEEK 154
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIE-ANEILSSFDDR 138
+RL+ V+ GGGPTGVE SG L++ VR+ Y V + L+ E+LS +
Sbjct: 155 TRLMTVVIAGGGPTGVEISGMLAELRKSTVRREYPELVGTRFELYLVNGGGELLSPMSVK 214
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+ Y L K GV L+ V D K+ L +G + L+W++GV + L
Sbjct: 215 SQTYTLESLEKLGVNILLNTRVTDFKDSKVYLGNGDTIEAETLIWASGV---KAISFEGL 271
Query: 198 PKS---PGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFS 253
P + G R+ +D + +V ++D++A+GD C + P LAQVA +QGK L +
Sbjct: 272 PANIYGSGNRMIVDSFNKVRGMEDIYALGDTCVVTEDPEYPGGHPQLAQVAIQQGKNLAA 331
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
RI K E PF Y GSMA IG+ KA+ D+ K + GF+
Sbjct: 332 NFMRILK-----------QEPLLPFKYDDKGSMAIIGKNKAVADI----PFKNIHFQGFI 376
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+WL W +L ++++RNR NW+ + F +D S
Sbjct: 377 AWLAWLFIHLMSLLNYRNRMKTLYNWSIAY-FTKDNS 412
>gi|227818786|ref|YP_002822757.1| NADH dehydrogenase [Sinorhizobium fredii NGR234]
gi|36959043|gb|AAQ87468.1| NADH Dehydrogenase [Sinorhizobium fredii NGR234]
gi|227337785|gb|ACP22004.1| putative NADH dehydrogenase [Sinorhizobium fredii NGR234]
Length = 438
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 167/337 (49%), Gaps = 42/337 (12%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM---LSDVPGISE 77
+I YD L++A GA + FG ++A L+ + A IR ++L ++D P +
Sbjct: 116 RIPYDYLIVATGARHTYFGNDDWADHAPGLKTITDATAIRARILSAFERAEVTDDPCL-- 173
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSF 135
+ +LL +VVGGGPTGVE +G +++ R + + + + V L+EA E IL +
Sbjct: 174 --RHKLLTFIVVGGGPTGVELAGAIAELARRTIVRDFRRIDSSSARVVLVEAGERILPAM 231
Query: 136 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
L A QL GV ++ G V D + L DGTE+ ++W+ GV S K
Sbjct: 232 PCCLSRKAQRQLEGLGVEVLLGNAVASCDDSGVRLADGTEIGSACILWAAGVMASRAGKW 291
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
+ GR+ +DE L P ++F +GD + + G+ V P +A A++ G+Y
Sbjct: 292 IGAAADRAGRVIVDERLNPPGHSEIFVIGDTASVTGADGRPV-PGVAPAAKQMGRY---- 346
Query: 255 LNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
A M LGD PF YR G++ATIGR A+ D R+ +
Sbjct: 347 --------------AARMILGDIAGRPSAPFRYRDYGNLATIGRKAAVADFRRAR----- 387
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+G+ +WLVW A+L +V +RNR V ++WA ++
Sbjct: 388 -LSGYAAWLVWNFAHLWFLVGFRNRLMVFLDWAVAYL 423
>gi|383755134|ref|YP_005434037.1| putative NADH dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367186|dbj|BAL84014.1| putative NADH dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 419
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 167/336 (49%), Gaps = 22/336 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L++A GA + FG+ V++++ ++ + A IR +L ++ EE+
Sbjct: 96 EIEYDYLILAAGATTNFFGMTEVEQHSFGMKSLQEALHIRNHVL-HMFERANKSKDPEER 154
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT--LIEAN-EILSSFDD 137
++L V+VGGGPTG+E +G +S+ I ++++ H D+ VT LIEA +L
Sbjct: 155 RKMLSFVIVGGGPTGIEEAGAISELI--GIQKKEFHNLDFSEVTVKLIEATPNVLPMMPQ 212
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
LR + L GV L+ V D + L +G E+P L+W+ GV +++
Sbjct: 213 NLRDHTVEVLRSKGVEVLLNTQVTGYDGHVIKLKNGEEIPTSTLIWAAGVKAVPFIENCG 272
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ +DE LRV Q+VFA+GDC+ + T + L +A VA ++ +
Sbjct: 273 GEVDRAGRVIVDEKLRVNGSQNVFAIGDCANFCHGTERP-LATVAPVATQEAVVAHENIM 331
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ + EL FVY+ LG+MATIGR +A+V K S + GF++W
Sbjct: 332 RLIRG---------QQEL-KTFVYKDLGAMATIGRGQAVVA----KTSMNPEMTGFIAWC 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W +L R+ VA+ W + G + RI
Sbjct: 378 AWMFIHLIRLAGTHTNITVAIKWTWNLLSGTRLGRI 413
>gi|392380621|ref|YP_005029817.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Azospirillum brasilense Sp245]
gi|356875585|emb|CCC96323.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Azospirillum brasilense Sp245]
Length = 453
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 167/323 (51%), Gaps = 26/323 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD+LV+A G+ S FG E A L+ + +A+ IR +LL+N +++ +K+
Sbjct: 107 VPYDRLVLATGSSYSYFGHDDWAEIAPGLKTIENARRIRARLLMNFEQAEMCEDPARQKA 166
Query: 82 RLLHCVVVGGGPTGVEFSG---ELSDFIM-RDVRQRYSHVKDYIHVTLIEANE-ILSSFD 136
L+ +VVGGGPTGVE +G EL+ F + RD R+ V L+EA ILS+F
Sbjct: 167 -LMTTIVVGGGPTGVEMAGAVAELARFTLARDFRRIDPRTA---RVLLVEAGPRILSTFP 222
Query: 137 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
D L YA +L + GV ++ G + + + G +P G +VW GV S L
Sbjct: 223 DDLGQYARRKLEELGVVVLTGQAVESITPEGATVGGRFIPAGAIVWGAGVKASPAGSWLG 282
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ GRI +D + VP V DV+A+GD + GK LP LAQVA++QG++L
Sbjct: 283 VETDRSGRIPVDADMAVPGVPDVYALGDTAALAGDDGKP-LPGLAQVAKQQGEHL----- 336
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
GGG S + +PF +R+ G+ A +GR A+ D K L G+ +W+
Sbjct: 337 -----GGGLEASLLRGQPLEPFRFRNRGNTAIVGRSAAVFDFGTRK------LKGWFAWV 385
Query: 317 VWRSAYLTRVVSWRNRFYVAVNW 339
+W ++ +V++ R V + W
Sbjct: 386 LWAIVHVYLLVNFHKRMLVTMQW 408
>gi|189912869|ref|YP_001964758.1| NADH dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|189913194|ref|YP_001964423.1| NADH dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|167777545|gb|ABZ95845.1| NADH dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167781262|gb|ABZ99559.1| NADH dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 423
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 168/333 (50%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
SYD LV+A GA+ S FG + L+ + A IRR++LL+ +++ E KS
Sbjct: 99 SYDYLVMATGAKTSYFGNPQWQNKTLGLKNLKDALAIRRQILLSFEQAELIADYETSKS- 157
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRLR 140
L+H V++GGGPTGVE +G +++ +R+ + ++ VTLIEA ++L++F +
Sbjct: 158 LMHYVIIGGGPTGVELAGSIAELSHNIIRKDFRNIDSGMTKVTLIEAGPKLLNAFSESSS 217
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV L V D+ ++L D T + ++W+ GV S L K + K
Sbjct: 218 QFTKKKLESRGVEVLTNSPVLDITDSGVVLKDRT-IESKTIIWAAGVEGSDLAKKTSINK 276
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
RI +DE+ R DVF +GD + + + + LP ++ VA +QG+Y+ L+ I
Sbjct: 277 DKANRILVDEYCRSIDHNDVFVIGDAANFSKGLNRP-LPGVSPVAMQQGRYVAKLIQSID 335
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
K G+ PF Y G+MATIGR A+ E L L G + W W
Sbjct: 336 K---GKKTI--------PFQYFDKGNMATIGRTDAVA------EFGALRLKGIIGWFGWL 378
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ ++W +++ R SR+
Sbjct: 379 FVHLVYQVGFKNKMSTLISWVWSYLTFRAGSRL 411
>gi|380512505|ref|ZP_09855912.1| NADH dehydrogenase (ubiquinone) [Xanthomonas sacchari NCPPB 4393]
Length = 430
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 171/334 (51%), Gaps = 22/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD L++A GA + FG +A L+ + A ++RR LLL ++ ++
Sbjct: 99 LAYDYLLVATGATHAYFGHDDWAAHAPGLKTLDDALQLRRHLLLAFERAEAE-TDPAARA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L +VGGGPTGVE +G L++ ++ + + V LIEA +LSSF + L
Sbjct: 158 AWLSFAIVGGGPTGVELAGTLAEIARHTLKHEFRRIDPAEARVRLIEAGPRVLSSFPEHL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G+ V D+D+ L T VP +VW+ GV S L K+L P
Sbjct: 218 SAKAQKQLEKLGVEVLTGVPVADIDASGYRLGS-TFVPARTVVWAAGVAASPLAKTLQTP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L VP ++F GD + ++ G+ V P +A A++ G+++ L R
Sbjct: 277 LDRSGRVQVQPDLSVPGHPELFVAGDLAAVQQADGRPV-PGVAPAAKQMGRHVADTLRR- 334
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ G A+ PF Y G++ATIGR A+V L + L L+G L+W W
Sbjct: 335 -RLRGDTASV--------PFRYADYGNLATIGRMAAIVHLGR------LQLSGVLAWWFW 379
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNR V +NWA + + +RI
Sbjct: 380 LAAHVFFLIGFRNRVVVLLNWAWAYWSYQRAARI 413
>gi|334128805|ref|ZP_08502684.1| pyridine nucleotide-disulfide oxidoreductase [Centipeda periodontii
DSM 2778]
gi|333386217|gb|EGK57435.1| pyridine nucleotide-disulfide oxidoreductase [Centipeda periodontii
DSM 2778]
Length = 446
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 168/338 (49%), Gaps = 16/338 (4%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL-MLSDVPGISEEE 79
+ISYD LV+A GA + FG V+ N+ ++ + A +R ++ S G + E
Sbjct: 113 EISYDYLVLAAGATTNFFGNKSVERNSYAMKTLQEAISLRGHIIHEFERASRKSGPDQRE 172
Query: 80 -KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSSF 135
+ R L+ V+VGGG TG+E +G L + I D+ ++ H D+ +HVTL+EA +L
Sbjct: 173 ARQRHLNFVIVGGGATGIEMAGALMELI--DIFKKEFHTIDFSEVHVTLLEAMGSVLPMV 230
Query: 136 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
L+ + L K GV + + V + D L LN+G +P ++W+ GV +K
Sbjct: 231 PPDLQQHTIDVLRKKGVDVRLNTAVTEYDGNDLTLNNGEVIPTKTVIWAAGVRAQDFIKD 290
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
GRI ++E L V VFA+GDC+ + + LP +A VA ++ +
Sbjct: 291 CGGEVDRAGRIIVEENLLVKGSDRVFAIGDCANFQHGDMQRPLPTVAPVATQEA---LQV 347
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
I G+ +LG FVY+ LG+MATIG+ +A+++ L ++GF +
Sbjct: 348 KENIMALIAGKTPD----QLGK-FVYKDLGAMATIGKGEAVMNGPMPVLGFNLKMSGFFA 402
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W W +L R+ F V+V W F FG ++RI
Sbjct: 403 WFAWMLVHLIRLAGKYADFTVSVKWIWNFFFGTRLARI 440
>gi|401624426|gb|EJS42483.1| ndi1p [Saccharomyces arboricola H-6]
Length = 513
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 194/361 (53%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + I YD L+ A+GAE +TFGI GV + FL+E+ ++ EIRR NL ++
Sbjct: 159 LHQAEPAE--IKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRSFAANLEKAN 216
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I
Sbjct: 217 LLPKGDPERKRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 276
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 277 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 336
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ +L +P+ + G ++ +L+V ++FA+GD + L
Sbjct: 337 WATGNKARPVITNLFNKIPEQNASKRGLAVNNFLQVKGSNNIFAIGDNAF-------AGL 389
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + S KD E + PF Y LG++A
Sbjct: 390 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKCLFSRKDKIDLLFEENNFKPFKYNDLGALAY 449
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 450 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRVKVFFDWVKLAFFKRD 508
Query: 349 I 349
Sbjct: 509 F 509
>gi|307109311|gb|EFN57549.1| hypothetical protein CHLNCDRAFT_143182 [Chlorella variabilis]
Length = 540
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 198/363 (54%), Gaps = 48/363 (13%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F+I YD LV+++G + +TFG GV+E+ F++E+ + +R ++ L+ +PG E
Sbjct: 193 QFEIPYDVLVVSVGEQPATFGTPGVEEHCFFMKEIPDSVRLRERIQSQFELATLPGSQEG 252
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDD 137
E + LH VVVGGGPTGVEF+G +SDF+ D++++Y + Y+ VTL+ + ILS+FD+
Sbjct: 253 EMATALHFVVVGGGPTGVEFAGTMSDFLREDLKKKYPELMPYVRVTLLNSQGTILSAFDE 312
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL- 195
+++ +A + GV + G+ V +V + + L G E+ YG+ VWS G P LV+ L
Sbjct: 313 KMQKHALDNFKRVGVDVRTGVRVTEVTNDTITLKGGEEIKYGVCVWSAGNAPRPLVQQLA 372
Query: 196 -DLPK----SPGGR---IGIDEWLRVPSVQDVFAVGDCS-----------GYLESTGKTV 236
+P+ PGGR + +D +LRV +DV A+GDCS ++ + G
Sbjct: 373 EQIPEQAQYQPGGRPSKLAVDPFLRVIGARDVLAIGDCSLVVAGQQGAYAAHMINRGFMP 432
Query: 237 LPALAQVAER--QGKYLFSLL-------NRIGKAGGGRANSAKDMELGDPFVYRHLGSMA 287
LP +++A+ G+ LF+ + + G+ G + + + PF + +LG MA
Sbjct: 433 LPPPSKLADYLFPGQQLFATMGSTLAYDDEGGEEGEEGEGAPRLIYYKKPFEFLNLGIMA 492
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
+G +AL ++ Q +K + L+G L++LV V + R VFGR
Sbjct: 493 YLGDDRALTEI-QLPFTK-VKLSGSLAFLV--------CVPDQARLKAQ-------VFGR 535
Query: 348 DIS 350
D+S
Sbjct: 536 DLS 538
>gi|421076594|ref|ZP_15537576.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans JBW45]
gi|392525206|gb|EIW48350.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans JBW45]
Length = 418
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 177/335 (52%), Gaps = 23/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
I+YD L++A+G + FG+ ++ N ++ + + IR +L L+ +++ +
Sbjct: 100 NIAYDYLIVAVGGMTNYFGMKSMETNGFGMKTLDESVTIRNHILRMFELAAHEKDADKRR 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
+ LL V+VGGGPTGVE +G LS+ I + + Y H+ + + L+EA +++L++ +
Sbjct: 160 A-LLTFVIVGGGPTGVESAGALSELIYHVMIREYHHLNFKEVRIMLVEASDKLLATMPEE 218
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR L + V + + V D D +K+ L G +P +VW+ GV S L+ +LD+
Sbjct: 219 LREVTVETLIRKHVEVRMCVQVTDYDGEKMSLKGGEVIPTNTVVWAAGVKASALMDTLDV 278
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
++ R ++++L++P+ +VF +GD + Y++ G+ LP +A VA +Q
Sbjct: 279 EQASMRRAIVNDFLQLPNRPEVFVIGDAAHYVQ--GERPLPMIAPVAIQQADI------- 329
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
N + EL FVY+ +G+MATIGR A+V + K GF++W +
Sbjct: 330 ---TAKNIRNLIRGKEL-KKFVYKDVGNMATIGRNAAVVHMGAFKTH------GFIAWSI 379
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ R++ +RNR V V W ++ + RI
Sbjct: 380 WSLVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 414
>gi|444313072|ref|ZP_21148633.1| NADH dehydrogenase [Ochrobactrum intermedium M86]
gi|443483605|gb|ELT46446.1| NADH dehydrogenase [Ochrobactrum intermedium M86]
Length = 423
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 177/349 (50%), Gaps = 31/349 (8%)
Query: 7 TVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN 66
V D+ R LE YD L+IA GA + FG +++A ++ + A +R K+
Sbjct: 86 VVLDDGRELE-------YDSLLIATGATHAYFGNPQWEKHAPGIKTLEDAMHLRNKIFEA 138
Query: 67 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTL 125
++ E+K+ L+ +VGGGPTGVE +G LSD +R + + + V L
Sbjct: 139 FEYAETEP-DPEKKAAWLNFAIVGGGPTGVELAGALSDIAKHTLRGEFRSIDPGMATVRL 197
Query: 126 IEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWS 183
IEA +IL +F D L A QL + GV +V+ V +++ LN G VP ++W+
Sbjct: 198 IEAGPKILGAFPDELSFAAELQLRRLGVEVVKNCRVTEINQHGYSLN-GAFVPCRTVIWA 256
Query: 184 TGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
GV S L + L++P GR+ +++ L VP ++F GD + +E G+ V P +A
Sbjct: 257 AGVQASPLGRRLNVPLDRAGRVKVEKNLSVPGHGNIFVAGDLAS-IEVNGRPV-PGVAPA 314
Query: 244 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303
A++ G Y+ LL +A A E F Y GS+A IGR A+VD+ +
Sbjct: 315 AKQMGAYVAELL---------KARLAGRQE--PVFDYHDKGSLAIIGRMAAVVDVGK--- 360
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L+G+++WL W + ++ ++ + NRF V +NW + R SRI
Sbjct: 361 ---FRLSGYIAWLFWLTIHIFFLIGFGNRFVVMLNWGINYWTHRRFSRI 406
>gi|222086349|ref|YP_002544883.1| NADH dehydrogenase [Agrobacterium radiobacter K84]
gi|221723797|gb|ACM26953.1| NADH dehydrogenase protein [Agrobacterium radiobacter K84]
Length = 405
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISEE 78
I YD LV+A GA + FG + A L+ + A IRR++LL +++ P I
Sbjct: 81 IGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEQAELEKDPAI--- 137
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFD 136
+ LL +VG GPTGVE +G +++ + + + + ++ + L+EA +L+SF
Sbjct: 138 -RDALLTFTIVGAGPTGVELAGIIAELARKTLPKEFRNIDTSKARIILVEAGPRVLASFV 196
Query: 137 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L YA L K GV + G V ++ + + D T VP +VW+ GV S K L
Sbjct: 197 EELSDYAQKALEKLGVEIHLGKPVTSCTAEGVTIGD-TFVPCRTIVWAAGVQASPAAKWL 255
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
D+P GR+ +D+ L P D+F +GD + G V P +A A++QG Y+ ++
Sbjct: 256 DVPADRAGRVVVDKELHAPGQPDIFVIGDTAAVTREDGSPV-PGIAPAAKQQGAYVAKVI 314
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
RA A G PF YRH GS+ATIG+ A++D + K L G+L+W
Sbjct: 315 ---------RAKLAGQPAPG-PFHYRHQGSLATIGKSAAIIDFGRIK------LKGWLAW 358
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VW A++ ++ R R VA +W ++ + +R+
Sbjct: 359 WVWGLAHIYFLIGTRWRIAVAWSWLWIYISRQHSARL 395
>gi|340348396|ref|ZP_08671480.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella dentalis
DSM 3688]
gi|433653260|ref|YP_007297114.1| NADH dehydrogenase, FAD-containing subunit [Prevotella dentalis DSM
3688]
gi|339606965|gb|EGQ11917.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella dentalis
DSM 3688]
gi|433303793|gb|AGB29608.1| NADH dehydrogenase, FAD-containing subunit [Prevotella dentalis DSM
3688]
Length = 437
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 178/344 (51%), Gaps = 24/344 (6%)
Query: 6 ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLL 65
+ V E ++L+ + YD LV+A GA + FG ++ NA ++ V A +R +L
Sbjct: 86 QAVNPEEQSLQTSFGTLYYDFLVLAAGATTNFFGNADIERNALPMKTVAEAMRLRNTILQ 145
Query: 66 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVT 124
NL ++ +EE + RL++ V+VGGGP+GVE +G L++ V + Y + +H+
Sbjct: 146 NLERAETED-NEEARQRLMNVVIVGGGPSGVEIAGALAEMKRTIVPRDYPDLDASRMHIC 204
Query: 125 LIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVW 182
L+++ + +L D L A L++ G+++++G V D + ++L G + GL VW
Sbjct: 205 LLDSGDRLLKGMDAGLSARAERDLTELGIKVMKGCRVVDCNDCGVVLQGGDTLEAGLTVW 264
Query: 183 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL--PAL 240
+GV S + GRI D + RV V +V+AVGD S +E L P L
Sbjct: 265 VSGVRASAIGGLPTASIGHAGRILTDRYCRVKGVPNVYAVGDQS-LVEGDEAYPLGHPQL 323
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQVA +Q + L+R + GRA PF YR+LG+MATIGR KA+ ++ +
Sbjct: 324 AQVAMQQAATVAHNLSRRLE---GRAE--------QPFSYRNLGAMATIGRKKAVAEIGR 372
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GF +WL+W +L ++ RN+ V +NW ++
Sbjct: 373 ------FRFGGFPAWLLWLVVHLRSILGVRNKTVVFLNWVWNYL 410
>gi|418695893|ref|ZP_13256905.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. H1]
gi|421108486|ref|ZP_15569023.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. H2]
gi|409956347|gb|EKO15276.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. H1]
gi|410006335|gb|EKO60094.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. H2]
Length = 422
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ + + L +G +P ++W+ GV +++ +L +
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQANSIASTLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|219847442|ref|YP_002461875.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chloroflexus aggregans DSM 9485]
gi|219541701|gb|ACL23439.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chloroflexus aggregans DSM 9485]
Length = 442
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 172/341 (50%), Gaps = 32/341 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ISYD L++A G+ + FG + + A ++++ AQ +R +LL + V +
Sbjct: 105 EISYDYLILAAGSTTNFFGNNQIARYALGMKDLDEAQRLRNHVLLCCERAAVES-DPTRR 163
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFDDR 138
+ LL VVGGGPTGVE +G + I +R+ Y + V LIEA N IL+SF +
Sbjct: 164 AALLTFAVVGGGPTGVELAGAFIELIRHVIRRDYPMLDTRQARVVLIEATNHILASFPES 223
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L+H A +L + GV + ++ V D L DG+ +P +VW+TGV + L +L +
Sbjct: 224 LQHAALQRLRQMGVEVRLQTQVADAHHDGLTFRDGSFLPAATVVWATGVRGAPLADALGV 283
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-----TGKTVLPALAQVAERQGKYLF 252
G R+ + L +P+ + VF VGD + YLE V P Q+ E+ + +
Sbjct: 284 TLGRGARVVVTPHLTLPADERVFVVGDMA-YLEGYRPGVAYPMVAPVAIQMGEQAARNII 342
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+ LN + PF Y G MATIGR A++D + G+ L+G+
Sbjct: 343 AQLNH---------------QPMLPFHYIDKGQMATIGRSAAVLD------AFGIRLSGW 381
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
L+W+ W +L +V +RNR V +NWA + F + R + I
Sbjct: 382 LAWVGWLFVHLIALVGFRNRVLVLLNWAYSYFTYDRGVRLI 422
>gi|50841641|ref|YP_054868.1| NADH dehydrogenase [Propionibacterium acnes KPA171202]
gi|289424391|ref|ZP_06426174.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK187]
gi|289427552|ref|ZP_06429265.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes J165]
gi|295129692|ref|YP_003580355.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK137]
gi|335055422|ref|ZP_08548203.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
434-HC2]
gi|354606122|ref|ZP_09024093.1| hypothetical protein HMPREF1003_00660 [Propionibacterium sp.
5_U_42AFAA]
gi|386023098|ref|YP_005941401.1| NADH dehydrogenase-like protein YumB [Propionibacterium acnes 266]
gi|387502516|ref|YP_005943745.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes 6609]
gi|407934533|ref|YP_006850175.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes C1]
gi|417930539|ref|ZP_12573915.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK182]
gi|422384122|ref|ZP_16464263.1| NADH dehydrogenase [Propionibacterium acnes HL096PA3]
gi|422386951|ref|ZP_16467068.1| NADH dehydrogenase [Propionibacterium acnes HL096PA2]
gi|422394129|ref|ZP_16474176.1| NADH dehydrogenase [Propionibacterium acnes HL099PA1]
gi|422424138|ref|ZP_16501089.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL043PA1]
gi|422429276|ref|ZP_16506181.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL072PA2]
gi|422436965|ref|ZP_16513812.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL092PA1]
gi|422447824|ref|ZP_16524556.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA3]
gi|422455327|ref|ZP_16531997.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL030PA1]
gi|422460782|ref|ZP_16537416.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL038PA1]
gi|422475832|ref|ZP_16552277.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL056PA1]
gi|422476410|ref|ZP_16552849.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL007PA1]
gi|422479367|ref|ZP_16555777.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL063PA1]
gi|422481878|ref|ZP_16558277.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA1]
gi|422484846|ref|ZP_16561213.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL043PA2]
gi|422487955|ref|ZP_16564286.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL013PA2]
gi|422489399|ref|ZP_16565726.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL020PA1]
gi|422492407|ref|ZP_16568715.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL086PA1]
gi|422497668|ref|ZP_16573941.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA3]
gi|422503885|ref|ZP_16580122.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL027PA2]
gi|422504596|ref|ZP_16580830.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA2]
gi|422509064|ref|ZP_16585222.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL046PA2]
gi|422514639|ref|ZP_16590757.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA2]
gi|422519572|ref|ZP_16595618.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL074PA1]
gi|422520460|ref|ZP_16596502.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL045PA1]
gi|422523425|ref|ZP_16599437.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL053PA2]
gi|422525537|ref|ZP_16601539.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL083PA1]
gi|422527984|ref|ZP_16603971.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL053PA1]
gi|422531631|ref|ZP_16607579.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA1]
gi|422535009|ref|ZP_16610932.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL072PA1]
gi|422536166|ref|ZP_16612074.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL078PA1]
gi|422543979|ref|ZP_16619819.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL082PA1]
gi|422551585|ref|ZP_16627378.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA3]
gi|422554972|ref|ZP_16630742.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA2]
gi|422559385|ref|ZP_16635113.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA1]
gi|422567414|ref|ZP_16643040.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA2]
gi|50839243|gb|AAT81910.1| putative NADH dehydrogenase [Propionibacterium acnes KPA171202]
gi|289155088|gb|EFD03770.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK187]
gi|289159482|gb|EFD07673.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes J165]
gi|291375104|gb|ADD98958.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK137]
gi|313771303|gb|EFS37269.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL074PA1]
gi|313792734|gb|EFS40815.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA1]
gi|313803398|gb|EFS44580.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA2]
gi|313811668|gb|EFS49382.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL083PA1]
gi|313817809|gb|EFS55523.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL046PA2]
gi|313821366|gb|EFS59080.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA1]
gi|313824694|gb|EFS62408.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA2]
gi|313826358|gb|EFS64072.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL063PA1]
gi|313832135|gb|EFS69849.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL007PA1]
gi|313832936|gb|EFS70650.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL056PA1]
gi|313839796|gb|EFS77510.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL086PA1]
gi|314926400|gb|EFS90231.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA3]
gi|314961500|gb|EFT05601.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA2]
gi|314964108|gb|EFT08208.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL082PA1]
gi|314975372|gb|EFT19467.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL053PA1]
gi|314977423|gb|EFT21518.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL045PA1]
gi|314980086|gb|EFT24180.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL072PA2]
gi|314985236|gb|EFT29328.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA1]
gi|314986940|gb|EFT31032.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA2]
gi|314990566|gb|EFT34657.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA3]
gi|315078786|gb|EFT50808.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL053PA2]
gi|315081739|gb|EFT53715.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL078PA1]
gi|315082945|gb|EFT54921.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL027PA2]
gi|315086463|gb|EFT58439.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA3]
gi|315088179|gb|EFT60155.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL072PA1]
gi|315096990|gb|EFT68966.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL038PA1]
gi|315107555|gb|EFT79531.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL030PA1]
gi|327332670|gb|EGE74405.1| NADH dehydrogenase [Propionibacterium acnes HL096PA2]
gi|327333840|gb|EGE75557.1| NADH dehydrogenase [Propionibacterium acnes HL096PA3]
gi|327444692|gb|EGE91346.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL013PA2]
gi|327446545|gb|EGE93199.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL043PA2]
gi|327449011|gb|EGE95665.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL043PA1]
gi|327457243|gb|EGF03898.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL092PA1]
gi|328757809|gb|EGF71425.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL020PA1]
gi|328759641|gb|EGF73240.1| NADH dehydrogenase [Propionibacterium acnes HL099PA1]
gi|332674554|gb|AEE71370.1| NADH dehydrogenase-like protein YumB [Propionibacterium acnes 266]
gi|333761928|gb|EGL39451.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
434-HC2]
gi|335276561|gb|AEH28466.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes 6609]
gi|340772157|gb|EGR94670.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK182]
gi|353557529|gb|EHC26897.1| hypothetical protein HMPREF1003_00660 [Propionibacterium sp.
5_U_42AFAA]
gi|407903114|gb|AFU39944.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes C1]
gi|456740654|gb|EMF65166.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes FZ1/2/0]
Length = 460
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 163/338 (48%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
ISYD LV++ G A+ FG G EN+ + A +R + + L D+ + ++
Sbjct: 119 ISYDYLVLSQGVGANFFGTPGAAENSYTI--YTRASSLRARDAIFTYLEDL----DTQRD 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L FD L
Sbjct: 173 KTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMPFDPAL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + +V ++L DG +P +++W+ GVG V +
Sbjct: 233 RHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVTNWGFE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 293 QGRGGRIATDGTLLVKGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV------- 341
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y G+MATIGR A+V L S+ L G +W
Sbjct: 342 -------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFTGIGAW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W + ++ ++ RNR +N ++ F R+ I
Sbjct: 390 LTWVTVHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|384426213|ref|YP_005635570.1| NADH dehydrogenase [Xanthomonas campestris pv. raphani 756C]
gi|341935313|gb|AEL05452.1| NADH dehydrogenase [Xanthomonas campestris pv. raphani 756C]
Length = 419
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 175/334 (52%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 93 VNYDMLLLATGATHAYFGNDHWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 151
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF D L
Sbjct: 152 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPDDL 211
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V ++D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 212 TDKARKQLERLGVEVHTGTPVTNIDAFGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 270
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK++ +
Sbjct: 271 LDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKHIAKAIRAR 328
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ G+A A F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 329 QR---GQAAPA--------FHYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 371
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 372 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 405
>gi|431798495|ref|YP_007225399.1| NADH dehydrogenase, FAD-containing subunit [Echinicola vietnamensis
DSM 17526]
gi|430789260|gb|AGA79389.1| NADH dehydrogenase, FAD-containing subunit [Echinicola vietnamensis
DSM 17526]
Length = 451
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 165/330 (50%), Gaps = 25/330 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K +SYD LV+A G + FG+ V EN+ ++++ + IR +L NL + + +
Sbjct: 117 KGSVSYDYLVLATGTTTNFFGMDSVAENSLGMKDIRDSLNIRHMMLQNLEQAAIT-CDNK 175
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSFD 136
E+ L + V+VGGGP GVE +G L++F + + Y I ++ LIEA +E+LS+
Sbjct: 176 ERDALTNFVIVGGGPAGVEMAGALAEFCKYILPKDYPEYPSSIMNIYLIEAIDELLSTMS 235
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
D+ L V+ L+ V + D +++ G + L+W+ GV +
Sbjct: 236 DKASSKTLKYLEDLNVKVLLNEAVSNYDGKEVTTISGKTILAKNLIWTAGV-KGQFPNGI 294
Query: 196 DLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL-FS 253
D G RI D L+V +++FA+GD + + P +AQ A +QGKYL S
Sbjct: 295 DEKHIVRGNRIKTDANLKVEGYENIFAIGDIAALISEERPKGHPQVAQAAIQQGKYLGNS 354
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
+LN I + PF Y+ GS+AT+G+ KA+ DL + K AG+
Sbjct: 355 ILNLINN------------KPTQPFEYKDKGSLATVGKRKAVADLGKFK------FAGYF 396
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+WL+W +L + +RNR V NWA ++
Sbjct: 397 AWLLWSVVHLMSISGFRNRLMVGFNWAVSY 426
>gi|21233197|ref|NP_639114.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770139|ref|YP_244901.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str.
8004]
gi|21115048|gb|AAM43026.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575471|gb|AAY50881.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str.
8004]
Length = 428
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 175/334 (52%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 102 VNYDMLLLATGATHAYFGNDHWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF D L
Sbjct: 161 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPDDL 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V ++D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 221 TDKARKQLERLGVEVHTGTPVTNIDAFGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK++ +
Sbjct: 280 LDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKHIAKAIRAR 337
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ G+A A F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 338 QR---GQAAPA--------FHYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 381 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|418691054|ref|ZP_13252161.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. FPW2026]
gi|421127552|ref|ZP_15587775.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421133864|ref|ZP_15594008.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|400360090|gb|EJP16071.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. FPW2026]
gi|410021984|gb|EKO88765.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410434869|gb|EKP84002.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
Length = 422
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ + + L +G +P ++W+ GV +++ +L +
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQANSIAATLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|418710585|ref|ZP_13271355.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|410769174|gb|EKR44417.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|456972328|gb|EMG12753.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 422
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ + + L +G +P ++W+ GV +++ +L +
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQANSIAATLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|410098106|ref|ZP_11293087.1| hypothetical protein HMPREF1076_02265 [Parabacteroides goldsteinii
CL02T12C30]
gi|409224196|gb|EKN17131.1| hypothetical protein HMPREF1076_02265 [Parabacteroides goldsteinii
CL02T12C30]
Length = 429
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 173/342 (50%), Gaps = 34/342 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LVIA G + FG ++E A ++ + A E+R LL N + + + EE+
Sbjct: 101 ELTYDYLVIASGTITNFFGNKTIEEKALPMKTIQEALELRNTLLSNFEKATI-CTNPEER 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN-EIL 132
L++ V+VGGG TGVE SG L++ +R+ KDY +H+ L+E + +L
Sbjct: 160 QALMNVVIVGGGATGVEISGVLAEM------KRFVMPKDYPDLKQSDMHIYLVEGSPRLL 213
Query: 133 SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
A L GV ++ V D K+IL++ + + LVW +GV +
Sbjct: 214 GVMSPEASANAEKFLKGMGVNIILNKRVTDYQDGKVILDNNSTIATQTLVWVSGVTATHF 273
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
S GGRI ++E+ ++P + +VFA+GD E P +AQVA +QG L
Sbjct: 274 EHIDKEALSRGGRITVNEFNQMPGMANVFAIGDVCFQTEEDYPNGHPQVAQVAIQQGNLL 333
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
L R+ S K+++ F Y +LG++AT+GR KA+ DL++ L L G
Sbjct: 334 ADNLKRL--------ESGKELK---AFHYLNLGTLATVGRNKAVADLKK------LKLQG 376
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
F++W+VW +L ++ +N+ V + W + F + + I I
Sbjct: 377 FIAWMVWMGVHLRSILGVKNKLMVLIEWIWSYFTYDQSIRLI 418
>gi|417772723|ref|ZP_12420611.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418681090|ref|ZP_13242324.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418699098|ref|ZP_13260065.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418704810|ref|ZP_13265677.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|418712849|ref|ZP_13273578.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 08452]
gi|421118511|ref|ZP_15578848.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|400327193|gb|EJO79448.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409945400|gb|EKN95416.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410009870|gb|EKO68024.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410761958|gb|EKR28129.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410765423|gb|EKR36123.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410790618|gb|EKR84310.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 08452]
gi|455668189|gb|EMF33435.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 422
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ + + L +G +P ++W+ GV +++ +L +
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQANSIAATLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|417759660|ref|ZP_12407694.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000624]
gi|417766249|ref|ZP_12414201.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|417774062|ref|ZP_12421936.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000621]
gi|417786837|ref|ZP_12434522.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. C10069]
gi|418671350|ref|ZP_13232702.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000623]
gi|418725664|ref|ZP_13284282.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 12621]
gi|418731802|ref|ZP_13290077.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 12758]
gi|421119466|ref|ZP_15579786.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. Brem 329]
gi|400351076|gb|EJP03316.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|409944408|gb|EKN89991.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000624]
gi|409949689|gb|EKO04222.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. C10069]
gi|409961301|gb|EKO25048.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 12621]
gi|410347617|gb|EKO98490.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. Brem 329]
gi|410576178|gb|EKQ39186.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000621]
gi|410581611|gb|EKQ49420.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000623]
gi|410773796|gb|EKR53822.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 12758]
gi|455793279|gb|EMF44981.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456825800|gb|EMF74178.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Canicola str. LT1962]
Length = 422
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ + + L +G +P ++W+ GV +++ +L +
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQANSIAATLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|398380303|ref|ZP_10538421.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. AP16]
gi|397721619|gb|EJK82167.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. AP16]
Length = 425
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISEE 78
I YD LV+A GA + FG + A L+ + A IRR++LL +++ P I
Sbjct: 101 IGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEQAELEKDPAI--- 157
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFD 136
+ LL +VG GPTGVE +G +++ + + + + ++ + L+EA +L+SF
Sbjct: 158 -RDALLTFTIVGAGPTGVELAGIIAELARKTLPKEFRNIDTSKARIILVEAGPRVLASFV 216
Query: 137 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L YA L K GV + G V ++ + + D T VP +VW+ GV S K L
Sbjct: 217 EELSDYAQKALEKLGVEIHLGKPVTSCTAEGVTIGD-TFVPCRTIVWAAGVQASPAAKWL 275
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
D+P GR+ +D+ L P D+F +GD + G V P +A A++QG Y+ ++
Sbjct: 276 DVPADRAGRVVVDKELHAPGQPDIFVIGDTAAVTREDGSPV-PGIAPAAKQQGAYVAKVI 334
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
RA A G PF YRH GS+ATIG+ A++D + K L G+L+W
Sbjct: 335 ---------RAKLAGQPAPG-PFHYRHQGSLATIGKSAAIIDFGRIK------LKGWLAW 378
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VW A++ ++ R R VA +W ++ + +R+
Sbjct: 379 WVWGLAHIYFLIGTRWRIAVAWSWLWIYISRQHSARL 415
>gi|110635841|ref|YP_676049.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chelativorans sp. BNC1]
gi|110286825|gb|ABG64884.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chelativorans sp. BNC1]
Length = 471
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 169/324 (52%), Gaps = 28/324 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+++D L++A GA S FG A L+ + A+ IR K LL ++ + +E++
Sbjct: 117 LNFDYLILATGASHSYFGHPDWARFAPGLKTIADARRIRAKALLAFERAER-TLDPDEQA 175
Query: 82 RLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFD 136
R + +VGGGPTGVE +G L++ + RD R S + + LIEA IL +F
Sbjct: 176 RQMTIAIVGGGPTGVELAGSLAELSRLTLARDFR---SARPEAARIMLIEAGPRILPAFS 232
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+++ YA +L + GV + V+D+ + G+ VP GL++W+ GV S L L
Sbjct: 233 EKISAYAHERLERLGVEVHTSTPVEDIQKDSITFG-GSTVPVGLVLWAAGVAASPLAAQL 291
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GR+ +D +RV +++VFA+GD + + GK LP LAQVA++QG++L +L
Sbjct: 292 GAETDRAGRVIVDGAMRVRGLRNVFAMGDAALFAGQDGKP-LPGLAQVAKQQGRHLGRML 350
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R +D + D FVY G+ A +GR+ A+ E L G+L+W
Sbjct: 351 AR----------HLRDGKPLDEFVYHGRGNTAIVGRHAAVF------EQGRFKLTGWLAW 394
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNW 339
L W ++ +V +++R V+V W
Sbjct: 395 LSWAIIHVYLLVGFQHRLTVSVQW 418
>gi|24217097|ref|NP_714580.1| NADH dehydrogenase [Leptospira interrogans serovar Lai str. 56601]
gi|386076063|ref|YP_005990252.1| NADH dehydrogenase [Leptospira interrogans serovar Lai str. IPAV]
gi|418666176|ref|ZP_13227607.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|24202125|gb|AAN51595.1|AE011592_7 NADH dehydrogenase [Leptospira interrogans serovar Lai str. 56601]
gi|353459725|gb|AER04269.1| NADH dehydrogenase [Leptospira interrogans serovar Lai str. IPAV]
gi|410758123|gb|EKR19722.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
Length = 422
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L + GV ++ G V D++ + + L +G +P ++W+ GV +++ +L +
Sbjct: 219 EFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQANSIAATLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G WL W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|188993346|ref|YP_001905356.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str.
B100]
gi|167735106|emb|CAP53318.1| Putative NADH dehydrogenase [Xanthomonas campestris pv. campestris]
Length = 461
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 175/334 (52%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 135 VNYDMLLLATGATHAYFGNDHWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 193
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF D L
Sbjct: 194 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPDDL 253
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V ++D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 254 TDKARKQLERLGVEVHTGTPVTNIDAFGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 312
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK++ +
Sbjct: 313 LDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKHIAKAIRAR 370
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ G+A A F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 371 QR---GQAAPA--------FHYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 413
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 414 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 447
>gi|422500098|ref|ZP_16576354.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL063PA2]
gi|313828931|gb|EFS66645.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL063PA2]
Length = 460
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 164/338 (48%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
ISYD LV++ G A+ FG G EN+ + A +R + + L D+ + ++
Sbjct: 119 ISYDYLVLSQGVGANFFGTPGAAENSYTI--YTRASSLRARDAIFTYLEDL----DTQRD 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L FD L
Sbjct: 173 KTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMPFDPAL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + +V ++L DG +P +++W+ GVG V +
Sbjct: 233 RHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVTNWGFE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 293 QGRGGRIATDGTLLVEGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV------- 341
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y G+MATIGR A+V L S+ L + G +W
Sbjct: 342 -------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKITGIGAW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W + ++ ++ RNR +N ++ F R+ I
Sbjct: 390 LTWVTLHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|426402333|ref|YP_007021304.1| NADH dehydrogenase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425859001|gb|AFY00037.1| NADH dehydrogenase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 423
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 169/330 (51%), Gaps = 24/330 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA+ S F +ENA L+ + A EIRR+LL+ ++ E++K
Sbjct: 95 LDYDYLILACGAKHSYFAHPEWEENAPGLKTLEQATEIRRRLLMAFERAEKETDPEKQKQ 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRL 139
+L V+VG GPTGVE +G + + + + + H+ V LIEA IL++F L
Sbjct: 155 QLTF-VIVGAGPTGVELAGTIGEISRHTLTKDFRHIDPSRTRVILIEAGPRILAAFHPDL 213
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A L GV++ V DV S ++L D + ++W+ GV PS++ K+L +P
Sbjct: 214 SRKAAADLEDLGVQIWTNTRVTDVKSDSVVLGDEV-IKAATILWAAGVQPSSINKTLGVP 272
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ I++ L + +VF +GD + YL G+ LP LA VA +QG + N+I
Sbjct: 273 LDRAGRVIIEKDLSLKEHPEVFILGDQACYLTDNGQA-LPGLASVAMQQGTH---AANQI 328
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ G+ F Y G MATIGR KA+ + L +GF +W++W
Sbjct: 329 LREIDGKPRLD--------FKYLDKGQMATIGRRKAIAQI------SNLKFSGFFAWILW 374
Query: 319 RSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 347
++ ++ ++NR +V WA + F F R
Sbjct: 375 LFIHVYYLIGFKNRVFVIWQWAYSYFTFKR 404
>gi|300777989|ref|ZP_07087847.1| NADH dehydrogenase [Chryseobacterium gleum ATCC 35910]
gi|300503499|gb|EFK34639.1| NADH dehydrogenase [Chryseobacterium gleum ATCC 35910]
Length = 423
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 178/342 (52%), Gaps = 24/342 (7%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
V E +T++ + YD LV+ALG E++ FG+ VK+ A ++ + A +R +LL L
Sbjct: 81 VNPENKTIDTDTGTLGYDYLVLALGTESNFFGMENVKKCALPMKNIEEALYLRNHILLTL 140
Query: 68 -MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTL 125
+ I + EK L + V+ GGGPTGVE +G L++ ++ Y +K ++ L
Sbjct: 141 EEAARNKDIKQAEK--LQNIVIAGGGPTGVELAGMLAEMGRYIAQKEYPEIKLGLSNLYL 198
Query: 126 IEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWS 183
I+A +LS + A +L + GV++V + VKD K+IL+DG + L+W+
Sbjct: 199 IDALPTLLSPMSKLAQKTAYEKLKELGVKIVLNVSVKDYTDNKVILSDGNIIETETLIWT 258
Query: 184 TGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL-ESTGKTVLPALAQ 242
+GV + + G RI +D + +V ++A+GD + L E P LAQ
Sbjct: 259 SGVIGKEVPGLPENSIGKGRRILVDAYNKVEGTNTIYALGDIALMLSEEKYPKGHPQLAQ 318
Query: 243 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 302
VA +QGK L + RI +D ++ +PF Y GSMA I +Y A+VDL ++
Sbjct: 319 VAIQQGKNLAANFKRI-----------EDGKVLEPFHYNDKGSMAIISKYNAVVDLPKH- 366
Query: 303 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
S GF++WL W ++ +V ++N+ +AV+W F+
Sbjct: 367 -----SFNGFIAWLTWLFIHIIPLVGFKNKIQLAVDWFRLFI 403
>gi|335052545|ref|ZP_08545426.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
409-HC1]
gi|342213089|ref|ZP_08705814.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
CC003-HC2]
gi|365961880|ref|YP_004943446.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365964124|ref|YP_004945689.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365973068|ref|YP_004954627.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn33]
gi|419420384|ref|ZP_13960613.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes PRP-38]
gi|422394825|ref|ZP_16474866.1| NADH dehydrogenase [Propionibacterium acnes HL097PA1]
gi|422426901|ref|ZP_16503819.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA1]
gi|422432190|ref|ZP_16509060.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL059PA2]
gi|422434785|ref|ZP_16511643.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL083PA2]
gi|422442510|ref|ZP_16519313.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA1]
gi|422446299|ref|ZP_16523044.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL027PA1]
gi|422450363|ref|ZP_16527080.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL030PA2]
gi|422452943|ref|ZP_16529639.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA3]
gi|422494494|ref|ZP_16570789.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL025PA1]
gi|422511231|ref|ZP_16587374.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL059PA1]
gi|422538647|ref|ZP_16614521.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL013PA1]
gi|422541435|ref|ZP_16617293.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA1]
gi|422546210|ref|ZP_16622037.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA3]
gi|422556979|ref|ZP_16632726.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL025PA2]
gi|422562202|ref|ZP_16637880.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL046PA1]
gi|422570813|ref|ZP_16646408.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL067PA1]
gi|422577951|ref|ZP_16653480.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA4]
gi|313764848|gb|EFS36212.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL013PA1]
gi|313814057|gb|EFS51771.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL025PA1]
gi|313815591|gb|EFS53305.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL059PA1]
gi|314916388|gb|EFS80219.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA4]
gi|314921603|gb|EFS85434.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA3]
gi|314930748|gb|EFS94579.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL067PA1]
gi|314955132|gb|EFS99537.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL027PA1]
gi|314959328|gb|EFT03430.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA1]
gi|314969219|gb|EFT13317.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA1]
gi|315099599|gb|EFT71575.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL059PA2]
gi|315102169|gb|EFT74145.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL046PA1]
gi|315109959|gb|EFT81935.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL030PA2]
gi|327334723|gb|EGE76434.1| NADH dehydrogenase [Propionibacterium acnes HL097PA1]
gi|327454421|gb|EGF01076.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA3]
gi|327456487|gb|EGF03142.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL083PA2]
gi|328756180|gb|EGF69796.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA1]
gi|328758561|gb|EGF72177.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL025PA2]
gi|333763380|gb|EGL40834.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
409-HC1]
gi|340768633|gb|EGR91158.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
CC003-HC2]
gi|365738561|gb|AEW82763.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365740805|gb|AEW80499.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365743067|gb|AEW78264.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn33]
gi|379978758|gb|EIA12082.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes PRP-38]
Length = 460
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 163/338 (48%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
ISYD LV++ G A+ FG G EN+ + A +R + + L D+ + ++
Sbjct: 119 ISYDYLVLSQGVGANFFGTPGAAENSYTI--YTRASSLRARDAIFTYLEDL----DTQRD 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L FD L
Sbjct: 173 KTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMPFDPAL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + +V ++L DG +P +++W+ GVG V +
Sbjct: 233 RHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVTNWGFE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 293 QGRGGRIATDGTLLVEGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV------- 341
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y G+MATIGR A+V L S+ L G +W
Sbjct: 342 -------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFTGIGAW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W + ++ ++ RNR +N ++ F R+ I
Sbjct: 390 LTWVTLHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|269839149|ref|YP_003323841.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thermobaculum terrenum ATCC BAA-798]
gi|269790879|gb|ACZ43019.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Thermobaculum terrenum ATCC BAA-798]
Length = 428
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 171/335 (51%), Gaps = 23/335 (6%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+ ++ YD LV+ALG+ + + ++++ ++ + A + +L L++ +S++
Sbjct: 104 QLELPYDHLVVALGSVTNFHHVASAEQHSFGMKTLEDAANLYNHILGAFELANA--LSDD 161
Query: 79 -EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDV-RQRYSHVKDYIHVTLIEANEILSSFD 136
E RLL V VGGG +GVE + ++ F+ R V R H D V + + +L
Sbjct: 162 GEHQRLLTFVTVGGGLSGVETTAAVNAFVRRLVLRYPNLHPADVRVVLVHHGSRLLEELG 221
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+RL Y +L +SGV L+R + +V + L G ++ +VW+ GV P+ +V +
Sbjct: 222 ERLAAYTHQELERSGVEVLLRTELSEVAGDHVTLKGGRQIRTKTVVWTAGVAPNPIVDRI 281
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ PK G + +D +L VP ++AVGDC+ G + P AQ A R+G+ + + +
Sbjct: 282 EAPKGAHGGLKVDPYLSVPGHPGLWAVGDCAEVPRVGGGSYAPT-AQNATREGRTVAANI 340
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
+ + GRA PF Y +G +A +GR A+ DL KG+ L+G +W
Sbjct: 341 ALVSQ---GRAPR--------PFRYSPIGELALVGRRSAIADL------KGIKLSGLPAW 383
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
L+WR YL ++ S R VA +W + GRDI+
Sbjct: 384 LLWRGVYLAKIPSGSQRLRVAADWLLEVLAGRDIN 418
>gi|422514058|ref|ZP_16590179.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA2]
gi|313807024|gb|EFS45522.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA2]
Length = 460
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 163/338 (48%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LV++ G A+ FG G EN+ + A +R + + L D+ + ++
Sbjct: 119 VSYDYLVLSQGVGANFFGTPGAAENSYTI--YTRASSLRARDAIFTYLEDL----DTQRD 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L FD L
Sbjct: 173 KTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMPFDPAL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + +V ++L DG +P +++W+ GVG V +
Sbjct: 233 RHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVTNWGFE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 293 QGRGGRIATDGTLLVKGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV------- 341
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y G+MATIGR A+V L S+ L G +W
Sbjct: 342 -------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFTGIGAW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W + ++ ++ RNR +N ++ F R+ I
Sbjct: 390 LTWVTVHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|224078850|ref|XP_002305652.1| predicted protein [Populus trichocarpa]
gi|222848616|gb|EEE86163.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 144/235 (61%), Gaps = 11/235 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C D + +F + YD LVIA+GA +TF GV E+ FL+EV AQ IRR
Sbjct: 143 KVYCRPNPDSSMNGKE-EFAVDYDYLVIAMGARPNTFNTPGVVEHCNFLKEVEDAQRIRR 201
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + + +P +S+EE+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y KD++
Sbjct: 202 SVIDSFEKASLPTLSDEERKRILHFVVVGGGPTGVEFAAELHDFVNDDLVKLYPAAKDFV 261
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSG--VRLVRGIVKDVD---SQKLILNDG--T 173
+T++E A+ IL+ FD R+ +A + + G V+L +VK D S K+ N G T
Sbjct: 262 QITILEAADHILNMFDKRITDFAEKKFHRDGIDVKLGSMVVKVSDKEISTKVRGNGGEIT 321
Query: 174 EVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+PYG++VWSTG+G +++S + ++ + DEWLRV ++A+GDC+
Sbjct: 322 AIPYGMVVWSTGIGTHPVIRSFMQQIGQTNRRALATDEWLRVEGCNSIYALGDCA 376
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL + NR+ +A + E G PF Y+HLG A +G
Sbjct: 470 LPATAQVAAQQGTYLANCFNRMEEAEKNPEGPIRFREEGRHRFRPFRYKHLGQFAPLGGE 529
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y +++VSWR R V +W FVFGRD SRI
Sbjct: 530 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKLVSWRTRALVITDWTRRFVFGRDSSRI 584
>gi|397618258|gb|EJK64817.1| hypothetical protein THAOC_14406 [Thalassiosira oceanica]
Length = 969
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 185/388 (47%), Gaps = 57/388 (14%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE-- 77
+SYD LV A+G + + G + L+ ++ +R + +L + P + E
Sbjct: 584 IDLSYDHLVCAVGTSSRLSLVKGAADYCFPLKTSQDSKRLRTAIGESLEYASRPDVQEYY 643
Query: 78 -----------EEKSRLLHCVVVGGGPTGVEFSGELSDFIMR---DVRQRYSHVKDYIHV 123
EE+ R +H +VGGGPTGVE +GEL DF + Y H++D + V
Sbjct: 644 YEDDEMQHQASEERRRRVHIAIVGGGPTGVELAGELMDFFQQVCGSPDGAYKHLRDDVSV 703
Query: 124 TLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND---GTE--VP 176
TLI++ E++ + D LR A L + GVR++ +++V +++ + G E +P
Sbjct: 704 TLIQSGTELVPAMDKELRARARQSLEEQGVRVIFNTRLQEVGQDYVVVKEKGSGAEETIP 763
Query: 177 YGLLVWSTGVGPSTLVKSL--DLPKSP---GGRIGIDEWLRVPSVQ-----DVFAVGDCS 226
GL VW+ G P VK L LP GR+ +D+WLR P+ + +GD +
Sbjct: 764 VGLTVWAAGNAPVPFVKELLSQLPPEATGSAGRVNVDDWLRCPTPTPETFGSILVLGDVA 823
Query: 227 GYLESTGK-----TVLPALAQVAERQGKYLFSLLN----------RIGKAGGGRANS--- 268
L K LP AQVA +QG + LLN R+ + G A S
Sbjct: 824 -CLNGRDKYKPEPEPLPQTAQVAGQQGSFAARLLNRGYEMDATPPRLPELSSGEAFSLLR 882
Query: 269 ----AKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLT 324
A+ +E F + LG +A IG+ +AL + + +G +++ +WR+ YL+
Sbjct: 883 TWLVARGLEEAQGFRFLSLGLLAYIGQEEALNQVMLGNVPL-FNYSGKVAFALWRTVYLS 941
Query: 325 RVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ S RN+ +A +W T FGRDI+R+
Sbjct: 942 KQASTRNQALIAFDWLRTEAFGRDITRL 969
>gi|410942335|ref|ZP_11374122.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira noguchii
str. 2006001870]
gi|410782590|gb|EKR71594.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira noguchii
str. 2006001870]
Length = 422
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 178/333 (53%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E KS
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKS- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+ +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D++ + + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLESRGVEVLTGTRVVDINERGIQL-EGKMIPTQTVIWAAGVQANSIASTLGATL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ SL+
Sbjct: 278 DRGGRVIVDEFCNIEGYPEVFVIGDIASYSKGLERP-LPGVSPVAMQQGRYVASLIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
N K+ + PF Y GSMATIGR A+ + L + G + W W
Sbjct: 334 -------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LKMKGLVGWFAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|423219318|ref|ZP_17205814.1| hypothetical protein HMPREF1061_02587 [Bacteroides caccae
CL03T12C61]
gi|392626084|gb|EIY20140.1| hypothetical protein HMPREF1061_02587 [Bacteroides caccae
CL03T12C61]
Length = 456
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 22/323 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNFFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TGVE +G LS+ + Y + +HV L+EA +L+ +
Sbjct: 160 QELLNIVIVGGGATGVEVAGVLSEMKKFVLPNDYPDMPASLMHVYLVEAGPRLLAGMSED 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DG+E+ +W +GV T
Sbjct: 220 SSAHAEKFLREMGVNILLNKRVVDYRDHKVMLEDGSEIATRTFIWVSGVTGVTFGNMDAS 279
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GGRI +DE+ RV +++VFA+GD C + + P LAQVA +QG+ L L
Sbjct: 280 LIGRGGRIKVDEFNRVEGMKNVFAIGDQCVQFSDKDYPNGHPQLAQVAIQQGELLAKNLM 339
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ K E PF YR+LGSMAT+GR +A+ + + K G+ +W+
Sbjct: 340 RLEKG-----------EEMKPFHYRNLGSMATVGRNRAVAEFSKIKTQ------GWFAWV 382
Query: 317 VWRSAYLTRVVSWRNRFYVAVNW 339
+W +L ++ RN+ V +NW
Sbjct: 383 LWLVVHLRSILGVRNKVVVLLNW 405
>gi|423297434|ref|ZP_17275495.1| hypothetical protein HMPREF1070_04160 [Bacteroides ovatus
CL03T12C18]
gi|392667075|gb|EIY60586.1| hypothetical protein HMPREF1070_04160 [Bacteroides ovatus
CL03T12C18]
Length = 458
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 24/328 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNYFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+ +
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLAGMSEE 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T + +LD
Sbjct: 220 SSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-IGNLDA 278
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+ L L
Sbjct: 279 SLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGELLAKNL 338
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K + G+ +W
Sbjct: 339 VRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQGWFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTF 343
++W +L ++ RN+ V +NW +
Sbjct: 382 VMWLVVHLRSILGVRNKVIVLLNWVWNY 409
>gi|383144389|gb|AFG53687.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144391|gb|AFG53688.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144393|gb|AFG53689.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144395|gb|AFG53690.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144397|gb|AFG53691.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144399|gb|AFG53692.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144401|gb|AFG53693.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144403|gb|AFG53694.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144405|gb|AFG53695.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144407|gb|AFG53696.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144409|gb|AFG53697.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144411|gb|AFG53698.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144413|gb|AFG53699.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144415|gb|AFG53700.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
Length = 87
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 79/87 (90%)
Query: 266 ANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTR 325
A S+ D + G FVY+H GSMA++GRYKALVDLRQ+KE+KG+S+AGF+SW++WRSAYLTR
Sbjct: 1 AGSSSDKDFGKQFVYKHFGSMASVGRYKALVDLRQSKEAKGVSMAGFVSWIMWRSAYLTR 60
Query: 326 VVSWRNRFYVAVNWATTFVFGRDISRI 352
V+SWRNR YVAVNWATTFVFGRDI+RI
Sbjct: 61 VLSWRNRVYVAVNWATTFVFGRDITRI 87
>gi|336414481|ref|ZP_08594827.1| hypothetical protein HMPREF1017_01935 [Bacteroides ovatus
3_8_47FAA]
gi|335933593|gb|EGM95595.1| hypothetical protein HMPREF1017_01935 [Bacteroides ovatus
3_8_47FAA]
Length = 458
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 24/328 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNYFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+ +
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLAGMSEE 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T + +LD
Sbjct: 220 SSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-IGNLDA 278
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+ L L
Sbjct: 279 SLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGELLAKNL 338
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K + G+ +W
Sbjct: 339 VRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQGWFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTF 343
++W +L ++ RN+ V +NW +
Sbjct: 382 VMWLVVHLRSILGVRNKVIVLLNWVWNY 409
>gi|333984106|ref|YP_004513316.1| NADH dehydrogenase (ubiquinone) [Methylomonas methanica MC09]
gi|333808147|gb|AEG00817.1| NADH dehydrogenase (ubiquinone) [Methylomonas methanica MC09]
Length = 428
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 163/324 (50%), Gaps = 28/324 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA S F G + A L+ + A I+ +LL +++ + +
Sbjct: 101 IQYDFLVLATGARPSYFNHDGWENFAPGLKSIDDAHRIKNLILLAFERAEIE-TDPQRRR 159
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRL 139
LL V+VGGGPTGVE +G +++ + + + H+ + + L++A IL FD++L
Sbjct: 160 ALLTFVIVGGGPTGVELAGAVAEISRKALVHEFRHIAPESSRIILVDAGPNILKGFDEKL 219
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A L GV ++ GI VK + + L DG ++ ++W+ GV S + L +
Sbjct: 220 SKRALKDLKSLGVEVMNGIRVKSIGPDSVDL-DGNQISTTSVIWAAGVTASPAAEWLGIQ 278
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
RI +D + V + ++A+GD S Y+ + T LP +A VA++QGK+L
Sbjct: 279 ADHSQRIPVDANMAVRGFEQIYAIGDTSNYVPAGSDTPLPGVAAVAKQQGKFL------- 331
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
GR A + G P F YR GSMATIGR KA+V L G L G +W
Sbjct: 332 -----GRYILA--LVSGKPLPTFKYRDFGSMATIGRNKAVVRLL------GWRLTGAFAW 378
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNW 339
L+W ++ ++ + RF VA NW
Sbjct: 379 LLWGVVHIYFLIGFPRRFRVAFNW 402
>gi|422550630|ref|ZP_16626427.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA1]
gi|314917226|gb|EFS81057.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA1]
Length = 460
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 163/338 (48%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
ISYD LV++ G A+ FG G EN+ + A +R + + L D+ + ++
Sbjct: 119 ISYDYLVLSQGVGANFFGTPGAAENSYTI--YTRASSLRARDAIFTYLEDL----DTQRD 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L FD L
Sbjct: 173 KTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMPFDPAL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + +V ++L DG +P +++W+ GVG V +
Sbjct: 233 RHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVTNWGFE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 293 QGRGGRIATDGTLLVEGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV------- 341
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y G+MATIGR A+V L S+ L G +W
Sbjct: 342 -------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFTGIGAW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W + ++ ++ RNR +N ++ F R+ I
Sbjct: 390 LTWVTLHIFPLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|398345855|ref|ZP_10530558.1| NADH dehydrogenase [Leptospira broomii str. 5399]
Length = 434
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 177/334 (52%), Gaps = 25/334 (7%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L++A GA S FG K+ T L+ + A EIR KLLL+ +++ E KS
Sbjct: 102 NYDFLILAAGARTSYFGNDHWKKYTTGLKNLKDALEIRTKLLLSFERAELEENKEIAKS- 160
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ VR + + + +TLIEA+ +L +F L
Sbjct: 161 LLNYVIIGGGPTGVELAGSIAELSHEIVRNEFHTIDPALSKITLIEASPRLLMAFHPNLS 220
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+A T+L K GV ++ G V ++D + + L DG + ++W+ GV + + ++L +P
Sbjct: 221 EFAKTRLEKRGVEVLVGTKVINIDEEGVHL-DGCTIRSSNIIWAAGVQANAISQALGVPL 279
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ +DE+ + +VF +GD + + ++ + LP ++ VA +QG+Y SL+ G
Sbjct: 280 DRTGRVMVDEYCNIEGHPEVFVIGDIANFTKNLERP-LPGVSPVAMQQGRYAASLI--FG 336
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL-SLAGFLSWLVW 318
G + + F Y GSMATIGR A+ + GL L GF W W
Sbjct: 337 DLKGKKRSI---------FKYVDKGSMATIGRQDAVAQV-------GLWRLKGFFGWAAW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 381 LFVHLFYQVGFKNKVSILITWFWSYLTFRAEARL 414
>gi|147827159|emb|CAN66469.1| hypothetical protein VITISV_016566 [Vitis vinifera]
Length = 618
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 143/236 (60%), Gaps = 14/236 (5%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C++ D E +F + YD LVIA+GA ++TF GV EN FL+EV AQ IRR
Sbjct: 178 KVYCKSSQDTNLNGEE-EFVVDYDYLVIAMGARSNTFNTPGVVENCHFLKEVEDAQRIRR 236
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P +++EE+ R+LH VVVGGGPTGVEFS EL DF+ D+ + Y VKD +
Sbjct: 237 SVIDCFERASLPNLTDEERKRILHFVVVGGGPTGVEFSAELHDFVNEDLVKLYPTVKDLV 296
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TL+EA + IL+ FD R+ +A + + G+ + G + K++ +++ + T
Sbjct: 297 KITLLEAGDHILNMFDKRITAFAEDKFHRDGIDVKTGSMVVKVSDKEISTKERGNGNITS 356
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+PYG+ VWSTG+G ++ +D K G + DEWLRV ++A+GDC+
Sbjct: 357 IPYGMAVWSTGIGTRPVI--MDFMKQIGQTNRRALATDEWLRVEGRDSIYALGDCA 410
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL S NR+ + + G PF Y+H G A +G
Sbjct: 504 LPATAQVAAQQGAYLASCFNRMEECEQNPEGPLRFRGSGRHRFHPFRYKHFGQFAPLGGE 563
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y +++VSWR R V +W FVFGRD SRI
Sbjct: 564 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKLVSWRTRALVISDWTRRFVFGRDSSRI 618
>gi|374585676|ref|ZP_09658768.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Leptonema illini DSM 21528]
gi|373874537|gb|EHQ06531.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Leptonema illini DSM 21528]
Length = 465
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 170/335 (50%), Gaps = 22/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ISYD L++A GA S FG ++NA L+ + A EIRR++ L+ L++ + +K
Sbjct: 99 EISYDYLILACGATHSYFGRDDWEDNAPGLKSIEEATEIRRRVFLSYELAEREENVDRQK 158
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDR 138
L +VVGGGPTGVE +G L + + + ++ + LIEA IL +FD
Sbjct: 159 E-YLTFIVVGGGPTGVELAGALGEISRYTLESNFRNINPKRTRIILIEAGPRILPAFDAD 217
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L +A +L + GV + V +V S +I G + ++W+ GV + + ++L +
Sbjct: 218 LSEHAARELERLGVTIWTNTSVTEVRSDGVIAG-GENIRARTILWAAGVLGNGMNRTLGV 276
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
R+ ++ + +P DVF VGD + + + LP LA VA +QGK++ N
Sbjct: 277 ELDRQSRVIVEADMSIPGSPDVFVVGDQASFSHTADGKALPGLAPVAIQQGKHVAK--NI 334
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
I + G PFVY G MATIGR A+V +S + L GFL+WL+
Sbjct: 335 IAEVKGKERK---------PFVYFDKGIMATIGRTDAVV------QSGSMRLTGFLAWLM 379
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ ++S+RNR V W ++ R +R+
Sbjct: 380 WIVVHIAYLISFRNRVMVLFQWGWSYFNFRRGARL 414
>gi|399925835|ref|ZP_10783193.1| NADH dehydrogenase [Myroides injenensis M09-0166]
Length = 434
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 169/337 (50%), Gaps = 43/337 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN----LMLSDVPGISE 77
I YD +VIA G++ + FG +KEN+ ++ + + IR +L N L+ +D+
Sbjct: 100 IFYDYVVIATGSKTNFFGNEHIKENSMAMKTIPQSLNIRSLVLENFESALLTNDI----- 154
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIE-AN 129
E+ L++ VVVG GPTGVE +G L++ +++ KDY + + +I+ A+
Sbjct: 155 SEQKALMNFVVVGAGPTGVELAGALAEM------RKHVLPKDYPDLDFRKMEINVIQGAD 208
Query: 130 EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188
++L + + A L K GV + G IV D D ++I G E ++W+ GV
Sbjct: 209 KVLDAMSSKSSKAAEKFLRKLGVNVWLGEIVVDYDGNRVITKSGKEFKADTVIWTAGVMG 268
Query: 189 STLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
+ V+ D G RI ++E+ +V DVFA+GD + + P +AQ A +Q
Sbjct: 269 AP-VEGFDATVIQRGNRIKVNEYNQVEGFTDVFAIGDVATMMTEKTPMGHPMMAQPAIQQ 327
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
G L L R+ + K M+ PFVYR GSMATIGR KA+VDL +
Sbjct: 328 GDLLAKNLVRLAEG--------KPMK---PFVYRDKGSMATIGRNKAVVDLPK------F 370
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GF +W VW +L ++ +RN+ V NW +V
Sbjct: 371 HFNGFFAWFVWMFVHLMSLIGFRNKLVVFWNWLYNYV 407
>gi|262409075|ref|ZP_06085620.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293372650|ref|ZP_06619032.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus SD
CMC 3f]
gi|294645012|ref|ZP_06722743.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus SD
CC 2a]
gi|294806975|ref|ZP_06765797.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides
xylanisolvens SD CC 1b]
gi|298483477|ref|ZP_07001654.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Bacteroides sp. D22]
gi|345508268|ref|ZP_08787900.1| hypothetical protein BSAG_02310 [Bacteroides sp. D1]
gi|229444808|gb|EEO50599.1| hypothetical protein BSAG_02310 [Bacteroides sp. D1]
gi|262353286|gb|EEZ02381.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292632459|gb|EFF51055.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus SD
CMC 3f]
gi|292639661|gb|EFF57948.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus SD
CC 2a]
gi|294445810|gb|EFG14455.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides
xylanisolvens SD CC 1b]
gi|295087899|emb|CBK69422.1| NADH dehydrogenase, FAD-containing subunit [Bacteroides
xylanisolvens XB1A]
gi|298270425|gb|EFI12009.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Bacteroides sp. D22]
Length = 465
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 24/328 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNYFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+ +
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMSSSLMHIYLIEAGPRLLAGMSEE 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T + +LD
Sbjct: 220 SSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-IGNLDA 278
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+ L L
Sbjct: 279 SLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGELLAKNL 338
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K + G+ +W
Sbjct: 339 IRMEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQGWFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTF 343
++W +L ++ RN+ V +NW +
Sbjct: 382 VMWLVVHLRSILGVRNKVIVLLNWVWNY 409
>gi|423216046|ref|ZP_17202572.1| hypothetical protein HMPREF1074_04104 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691232|gb|EIY84480.1| hypothetical protein HMPREF1074_04104 [Bacteroides xylanisolvens
CL03T12C04]
Length = 465
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 24/324 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNYFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+ +
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLAGMSEE 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T + +LD
Sbjct: 220 SSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-IGNLDA 278
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+ L L
Sbjct: 279 SLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGELLAKNL 338
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K + G+ +W
Sbjct: 339 IRMEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQGWFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNW 339
++W +L ++ RN+ V +NW
Sbjct: 382 VMWLVVHLRSILGVRNKVIVLLNW 405
>gi|336406025|ref|ZP_08586687.1| hypothetical protein HMPREF0127_04000 [Bacteroides sp. 1_1_30]
gi|335935571|gb|EGM97520.1| hypothetical protein HMPREF0127_04000 [Bacteroides sp. 1_1_30]
Length = 465
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 24/328 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNYFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+ +
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMSSSLMHIYLIEAGPRLLAGMSEE 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T + +LD
Sbjct: 220 SSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-IGNLDA 278
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+ L L
Sbjct: 279 SLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGELLAKNL 338
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K + G+ +W
Sbjct: 339 IRMEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQGWFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTF 343
++W +L ++ RN+ V +NW +
Sbjct: 382 VMWLVVHLRSILGVRNKVIVLLNWVWNY 409
>gi|299146767|ref|ZP_07039835.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Bacteroides sp. 3_1_23]
gi|298517258|gb|EFI41139.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Bacteroides sp. 3_1_23]
Length = 458
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 24/328 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNYFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+ +
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLAGMSEE 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T + +LD
Sbjct: 220 SSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-IGNLDA 278
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+ L L
Sbjct: 279 SLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQVADEDYPNGHPQLAQVAIQQGELLAKNL 338
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K + G+ +W
Sbjct: 339 VRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQGWFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTF 343
++W +L ++ RN+ V +NW +
Sbjct: 382 VMWLVVHLRSILGVRNKVIVLLNWVWNY 409
>gi|421592976|ref|ZP_16037608.1| NADH dehydrogenase [Rhizobium sp. Pop5]
gi|403701206|gb|EJZ18118.1| NADH dehydrogenase [Rhizobium sp. Pop5]
Length = 421
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 169/335 (50%), Gaps = 20/335 (5%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ YD LV+A GA + FG + A L+ + A IRR++LL +++
Sbjct: 94 MTLGYDTLVLATGATHAYFGRDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMEA-DPAV 152
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 137
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 138 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA L K GV ++ G S + T VP +VW+ GV S + L+
Sbjct: 213 ELSAYAQKALEKLGVEVLLGKPVTACSADGVQIGETIVPSRTIVWAAGVTASPAARWLEA 272
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P GR+ +++ L P + D+F +GD + L GK V P +A A++QG Y+ ++
Sbjct: 273 PADRAGRVVVEKDLSAPGLPDIFVIGDTASVLRENGKPV-PGIAPAAKQQGGYVAKVIR- 330
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ G A + PF YRH GS+ATIG+ A++D + K L G+++W +
Sbjct: 331 -ARLSGKPAPA--------PFKYRHQGSLATIGKSAAIIDFGRIK------LKGWIAWWI 375
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 376 WGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|153808632|ref|ZP_01961300.1| hypothetical protein BACCAC_02930 [Bacteroides caccae ATCC 43185]
gi|149128954|gb|EDM20171.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides caccae
ATCC 43185]
Length = 471
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 22/323 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 116 KAEYDYLVLAAGTTTNFFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 174
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TGVE +G LS+ + Y + +HV L+EA +L+ +
Sbjct: 175 QELLNIVIVGGGATGVEVAGVLSEMKKFVLPNDYPDMPASLMHVYLVEAGPRLLAGMSED 234
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DG+E+ +W +GV T
Sbjct: 235 SSAHAEKFLREMGVNILLNKRVVDYRDHKVMLEDGSEIATRTFIWVSGVTGVTFGNMDAS 294
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GGRI +DE+ RV +++VFA+GD C + + P LAQVA +QG+ L L
Sbjct: 295 LIGRGGRIKVDEFNRVEGMKNVFAIGDQCVQFSDKDYPNGHPQLAQVAIQQGELLAKNLM 354
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ K E PF YR+LGSMAT+GR +A+ + + K G+ +W+
Sbjct: 355 RLEKG-----------EEMKPFHYRNLGSMATVGRNRAVAEFSKIKTQ------GWFAWV 397
Query: 317 VWRSAYLTRVVSWRNRFYVAVNW 339
+W +L ++ RN+ V +NW
Sbjct: 398 LWLVVHLRSILGVRNKVVVLLNW 420
>gi|160886268|ref|ZP_02067271.1| hypothetical protein BACOVA_04275 [Bacteroides ovatus ATCC 8483]
gi|423289443|ref|ZP_17268293.1| hypothetical protein HMPREF1069_03336 [Bacteroides ovatus
CL02T12C04]
gi|156108153|gb|EDO09898.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus
ATCC 8483]
gi|392667154|gb|EIY60664.1| hypothetical protein HMPREF1069_03336 [Bacteroides ovatus
CL02T12C04]
Length = 458
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 24/328 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNYFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+ +
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLAGMSEE 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T + +LD
Sbjct: 220 SSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-IGNLDA 278
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+ L L
Sbjct: 279 SLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQVADEDYPNGHPQLAQVAIQQGELLAKNL 338
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K + G+ +W
Sbjct: 339 VRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQGWFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTF 343
++W +L ++ RN+ V +NW +
Sbjct: 382 VMWLVVHLRSILGVRNKVIVLLNWVWNY 409
>gi|146279372|ref|YP_001169530.1| hypothetical protein Rsph17025_3344 [Rhodobacter sphaeroides ATCC
17025]
gi|145557613|gb|ABP72225.1| hypothetical protein Rsph17025_3344 [Rhodobacter sphaeroides ATCC
17025]
Length = 455
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 173/321 (53%), Gaps = 23/321 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD L++A GA FG A L+ + A+ IR ++L++ ++ EE++
Sbjct: 109 VAYDWLILATGAVTGYFGHDDWSRVAPGLKTIEDARRIRTRVLMSFEHAER-CTDPEERA 167
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDRL 139
RL+ V+GGGPTGVE SG L++ + + + H++ D V L+EA +L F +
Sbjct: 168 RLMTIAVIGGGPTGVELSGALAELARFTLVRDFRHIRPDAARVLLVEAGPRLLGPFQEAS 227
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
YA +L + GVR++ G V+ + ++ L L +G +P GL++W+ GV S L + L
Sbjct: 228 ADYARQRLERLGVRVMTGRGVEAITAESLTL-EGETLPVGLVIWAAGVTASPLARQLG-E 285
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GGRI ++E L V V A+GD + G+ LP LAQVA++QG++L
Sbjct: 286 VDRGGRIAVNERLEVVGQSRVLAMGDVALCPGEDGRP-LPGLAQVAKQQGQHL------- 337
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
G++ G S +E PF YR G+ + +GR+ A+ + +++ L+G+ +W +W
Sbjct: 338 GRSLGAHLASGAPLE---PFTYRSCGNTSIVGRHAAVYETDRHR------LSGWPAWALW 388
Query: 319 RSAYLTRVVSWRNRFYVAVNW 339
++ +V ++NR V+ W
Sbjct: 389 AVVHVYLLVGFQNRIVVSFQW 409
>gi|289671392|ref|ZP_06492467.1| NADH dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB
4381]
Length = 417
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 172/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 89 LGYDMLLLATGATHAYFGNDHWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 147
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 148 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPEDL 207
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 208 TDKARKQLERLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 266
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 267 LDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 317
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA G R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 318 AKAIGARHRG----QTTPTFRYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 367
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 368 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|42521954|ref|NP_967334.1| NADH dehydrogenase [Bdellovibrio bacteriovorus HD100]
gi|39574484|emb|CAE77988.1| NADH dehydrogenase [Bdellovibrio bacteriovorus HD100]
Length = 429
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 170/330 (51%), Gaps = 24/330 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA+ S F +ENA L+ + A EIRR+LL+ ++ E++K
Sbjct: 101 LEYDYLILACGAKHSYFAHPEWEENAPGLKTLEQATEIRRRLLMAFERAEKETDPEKQKQ 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRL 139
+L V+VG GPTGVE +G + + + + + H+ V LIEA IL++F L
Sbjct: 161 QLTF-VIVGAGPTGVELAGTIGEISRHTLTKDFRHIDPSRTRVILIEAGPRILAAFHPDL 219
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A L GV++ V DV S ++L D + ++W+ GV PS++ K+L +P
Sbjct: 220 SRKAAADLEDLGVQIWTNTRVTDVKSDSVVLGDEV-IKAATILWAAGVQPSSINKTLGVP 278
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ I++ L + +VF +GD + YL G+ LP LA VA +QG + N+I
Sbjct: 279 LDRAGRVIIEKDLSLKEHPEVFVLGDQACYLTDKGQA-LPGLASVAMQQGTH---AANQI 334
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ G+ +E F Y G MATIGR KA+ + L +GF +W++W
Sbjct: 335 LREIEGKPR----LE----FKYLDKGQMATIGRRKAIAQI------SNLKFSGFFAWILW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 347
++ ++ ++N+ +V WA F F R
Sbjct: 381 LFIHVYYLIGFKNKVFVIWQWAYAYFTFKR 410
>gi|383113593|ref|ZP_09934365.1| hypothetical protein BSGG_3288 [Bacteroides sp. D2]
gi|313695753|gb|EFS32588.1| hypothetical protein BSGG_3288 [Bacteroides sp. D2]
Length = 458
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 171/333 (51%), Gaps = 34/333 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNFFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN-EIL 132
L++ V+VGGG TG+E +G LS+ +++ KDY +H+ LIEA +L
Sbjct: 160 QELMNIVIVGGGATGIEVAGILSEM------KKFVLPKDYPDMPSSLMHIYLIEAGPRLL 213
Query: 133 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
+ + +A L + GV L+ V D K++L DGTE+ +W +GV T+
Sbjct: 214 AGMSEDSSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVTI 273
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 250
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+
Sbjct: 274 GNMDPSLIGRGGRIKVDSFNRVEGMSNVFAIGDQCIQVADEDYPNGHPQLAQVAIQQGEL 333
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLIRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G+ +W++W +L ++ RN+ V +NW +
Sbjct: 377 GWFAWVMWLVVHLRSILGVRNKVIVLLNWVWNY 409
>gi|387762377|dbj|BAM15620.1| NADH dehydrogenase [Plasmodium gallinaceum]
Length = 529
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 193/397 (48%), Gaps = 75/397 (18%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
KI+YD L+IA+GA+ ++F I GV + A +++++ +IRRK NL S +P + EEK
Sbjct: 134 KINYDYLIIAVGAKTNSFNIKGVDKFAFYVKDIDDVLKIRRKFFENLEKSTLPNTTNEEK 193
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRL 139
LLH V+VGGGPTGVE +GE +DF+ R+V+Q Y + ++I +++IE +L +F +
Sbjct: 194 KNLLHIVIVGGGPTGVEVAGEFADFVNREVKQNYEDIFNFISISIIEGGKNLLPTFTQNI 253
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLIL------NDGTEVPYGLLVWSTGVGPSTLV 192
+ + L V +V+ + +D + PYG+L+W++G+ +TLV
Sbjct: 254 SDFTKYNFRNLNINVLTNYYVTEVNENYFYIQSSIDKSDKKKFPYGVLIWASGLAQTTLV 313
Query: 193 KSL--DLPKSPGGRI-GIDEWLRVPSVQ--DVFAVGD---------------------CS 226
+L +P+ +I +D L+V V+ +V+A+GD CS
Sbjct: 314 NNLLKKIPQQVNNKILNVDSQLKVIGVESNNVYAIGDCKKIFPLQLQKYTSELIDSLHCS 373
Query: 227 GYLESTGKTVLPALAQVAERQGKYLFSL-LNRIG------------------KAGGGRAN 267
T K+ L++V + KY + N+ G K+ A
Sbjct: 374 KLTSDTLKSKSEELSEVFPQASKYKWDYDKNKKGEMNEQEFHEYLCKMDENYKSPAPTAQ 433
Query: 268 SAK----------------DMELGDP-FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+AK D +L P F+ + GS+A IG ++ + L E KG
Sbjct: 434 NAKQEAYYLSNVFNNFLTRDKKLTVPSFIEKWKGSLAYIGNHQVVAHLPF-YEIKG---- 488
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
GFLS+ W++ Y+ +++W++R + T ++GR
Sbjct: 489 GFLSFTFWKAVYIQLLMTWKSRATFFFDCIRTKLYGR 525
>gi|429725051|ref|ZP_19259910.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella sp. oral
taxon 473 str. F0040]
gi|429151183|gb|EKX94059.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella sp. oral
taxon 473 str. F0040]
Length = 466
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 171/340 (50%), Gaps = 45/340 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
KISYD LV A G + FG V+E+A ++ V A +R LL N + + SE E+
Sbjct: 101 KISYDYLVFAAGTTTNFFGNKNVEEHAIPMKNVSEAMGLRNALLENFERA-LTCSSETER 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN-EIL 132
LL+ V+VGGG TGVE +G LS+ + Y KDY +++ LIEA +L
Sbjct: 160 QELLNVVIVGGGATGVEVAGALSEM------KNYVLPKDYPDMPSSLMNIYLIEAGPRLL 213
Query: 133 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
+ + L GV L+ +V D + ++IL DGT++ +W +GV T
Sbjct: 214 PAMSPPTSAHVEGFLRTMGVNVLLNKMVTDYQNHRVILKDGTQIATRTFIWVSGVAGET- 272
Query: 192 VKSLDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG--KTVLPALAQVAERQ 247
V +LD PK G RI +D + +V + VFA+GD E K P LAQVA +Q
Sbjct: 273 VGNLD-PKYLGRGRRIVVDAYNQVEGLDGVFAIGDQCIMPEGDPRWKGGHPQLAQVAIQQ 331
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELG---DPFVYRHLGSMATIGRYKALVDLRQNKES 304
GK L A + K +E G PF Y++LG+MAT+GR +A+ + + K
Sbjct: 332 GKLL--------------ARNLKALEKGKTLKPFRYKNLGAMATVGRNRAVAEFSEVK-- 375
Query: 305 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+AGF +W +W +L ++ RN+ V +NW +V
Sbjct: 376 ----MAGFFAWFMWLIVHLRSILGIRNKSIVFLNWVWNYV 411
>gi|282853202|ref|ZP_06262539.1| pyridine nucleotide-disulphide oxidoreductase [Propionibacterium
acnes J139]
gi|386070693|ref|YP_005985589.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes ATCC 11828]
gi|422389583|ref|ZP_16469680.1| NADH dehydrogenase [Propionibacterium acnes HL103PA1]
gi|422457940|ref|ZP_16534598.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA2]
gi|422463608|ref|ZP_16540221.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL060PA1]
gi|422466751|ref|ZP_16543313.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA4]
gi|422468484|ref|ZP_16545015.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA3]
gi|422565925|ref|ZP_16641564.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL082PA2]
gi|422576706|ref|ZP_16652243.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL001PA1]
gi|282582655|gb|EFB88035.1| pyridine nucleotide-disulphide oxidoreductase [Propionibacterium
acnes J139]
gi|314922488|gb|EFS86319.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL001PA1]
gi|314965567|gb|EFT09666.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL082PA2]
gi|314982727|gb|EFT26819.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA3]
gi|315091383|gb|EFT63359.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA4]
gi|315094318|gb|EFT66294.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL060PA1]
gi|315105040|gb|EFT77016.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA2]
gi|327329110|gb|EGE70870.1| NADH dehydrogenase [Propionibacterium acnes HL103PA1]
gi|353455059|gb|AER05578.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes ATCC 11828]
Length = 460
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 163/338 (48%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
ISYD LV++ G A+ FG G EN+ + A +R + + L D+ + ++
Sbjct: 119 ISYDYLVLSQGVGANFFGTPGAAENSYTIYT--RASSLRARDAIFTYLEDL----DTQRD 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L FD L
Sbjct: 173 KTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPGVSTDRVHVTLVEMANHLLMPFDPAL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + +V ++L DG +P +++W+ GVG V +
Sbjct: 233 RHYTRRQLQKRGVDVRTNTAIAEVRENSVLLKDGQTLPADMVIWAAGVGAHKSVTNWGFE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI + L V +FAVGD + E P LAQ A + G+ +
Sbjct: 293 QGRGGRIATNGTLLVKGQDRIFAVGDGAINTEDP----KPQLAQPAIQGGECV------- 341
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y G+MATIGR A+V L S+ L G +W
Sbjct: 342 -------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFTGIGAW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W + ++ ++ RNR +N ++ F R+ I
Sbjct: 390 LTWVTVHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|219129528|ref|XP_002184939.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403724|gb|EEC43675.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 475
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 190/398 (47%), Gaps = 49/398 (12%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+ + E + D +R + + YDKL++A+G + + G E L+ A+ +R
Sbjct: 81 LTIQLEDLLDSVRVGKASTIHLDYDKLIVAVGCRVNDQMVPGAAEYCLRLKTCEDARRLR 140
Query: 61 RKLLLNLM------LSDVPGISEEEKSRLLHC-------VVVGGGPTGVEFSGELSDFIM 107
+ +L ++D P ++ +K +VGGGPTGVE +GEL+DF+
Sbjct: 141 VAIGESLEYASRPDVADAPNLAAPDKEARQQERRRRATFCIVGGGPTGVELAGELADFVK 200
Query: 108 RDVRQR---YSHVKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDV 162
+ R Y +KD I + LI+ A+ ++ FD LR +A L K + + + V +V
Sbjct: 201 DCTKPRKGSYQRLKDDIRIILIQGADSLVPQFDRDLRDHALKTLQKQNIEVRLNTRVNEV 260
Query: 163 DSQKLILND---GTE--VPYGLLVWSTGVGPSTLVKSL--DLP---KSPGGRIGIDEWLR 212
+ L + G E + G+ VW+ G P + +L LP ++ GGR+ +D+WLR
Sbjct: 261 GDGYIKLAEKGGGVEETINNGVTVWAAGTSPVPFIDTLLSKLPEEARAVGGRVKVDKWLR 320
Query: 213 VPS-VQDVFA----VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRAN 267
P+ D F +GD + + LP AQVA +QG Y+ L NR
Sbjct: 321 CPTPTADTFGSILVLGDAAA--AERDDSFLPQTAQVAGQQGAYVARLFNRDYDLTQTPPV 378
Query: 268 SAKDMELGDP-------------FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
D E D F + +LG +A +G +AL + Q + S AG +S
Sbjct: 379 YYDDKEAIDKAWLNVRGLKEAPGFDFLNLGLLAYVGDKQALSQV-QLGDFPIASYAGSIS 437
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+++WRS YL + V+ RNR V+ +W + +FGRDI+R+
Sbjct: 438 FVLWRSVYLVKQVATRNRVLVSFDWLKSNLFGRDITRL 475
>gi|350568703|ref|ZP_08937101.1| NADH dehydrogenase [Propionibacterium avidum ATCC 25577]
gi|348660946|gb|EGY77642.1| NADH dehydrogenase [Propionibacterium avidum ATCC 25577]
Length = 469
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 164/338 (48%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
ISYD L+++ G A+ FG G E++ + A +R + + L D+ + ++
Sbjct: 128 ISYDYLILSQGVGANFFGTPGAAEHSYTIYT--RASSLRARDAIFTYLEDL----DTQRD 181
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ ++VGGGPTGVE +G L++ + + V D +HVTL+E A+ +L FD L
Sbjct: 182 KTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMADHLLMPFDPAL 241
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + + +V ++L DG +P +++W+ GVG V
Sbjct: 242 RHYTRRQLQKRGVDVRTKTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVSDWGFE 301
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI D LRV +FAVGD + E P LAQ A + G+ +
Sbjct: 302 QGRGGRIATDGTLRVNGHDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV------- 350
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y+ G+MATIGR A+V L S+ L G +W
Sbjct: 351 -------ARQIVHLELGEPLEKFEYQDKGTMATIGRNSAVVQL-----SEKLKFTGISAW 398
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W ++ ++ RNR +N ++ F R+ I
Sbjct: 399 LTWVMVHIYTLLGGRNRLQAMINLGARYIAFHREAGAI 436
>gi|407770523|ref|ZP_11117892.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407286546|gb|EKF12033.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 443
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 163/334 (48%), Gaps = 23/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LVIA GA S FG A L+ + A +IR+ LLL ++ EE+
Sbjct: 100 LSYDYLVIATGAVTSYFGNDHWAMVAPGLKNITEATDIRKSLLLAFERAE-NSEDAEERR 158
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
RLL+ +VVGGGPTGVE +G +++ + + + + + L E +L +F + L
Sbjct: 159 RLLNFIVVGGGPTGVEMAGAIAELAKQALSHDFRRIDPRDARIILAEGGPRLLGAFPEDL 218
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
Y L K GV + V D+ + + D +P ++W GV L
Sbjct: 219 SEYTRKSLEKIGVEVRTNQQVSDITAMGAQIGD-EFIPSANVIWGAGVRVDHLADWTGRE 277
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GGR+ ++ L VP +DVF +GD + G TV P +A A++QGKY+
Sbjct: 278 CDRGGRVMVNTDLSVPGYEDVFVIGDAAHVPWRDGMTV-PGIAPAAKQQGKYV------- 329
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
GGR PF YRH G++ATIGR++A++DL GL L G+L+W W
Sbjct: 330 ----GGRILDHMRSRETPPFAYRHAGNLATIGRHRAVIDL------NGLKLRGWLAWWFW 379
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R V V W +++F + +R+
Sbjct: 380 GLAHIYFLIGLRAPALVMVQWVWSYLFRKKGARL 413
>gi|150397170|ref|YP_001327637.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Sinorhizobium medicae WSM419]
gi|150028685|gb|ABR60802.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Sinorhizobium medicae WSM419]
Length = 422
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 170/333 (51%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA + FG A L+ + A IRR++L+ +++ + E+
Sbjct: 97 VPYDTLVLATGATHAYFGHDEWAPVAPGLKTLEDATTIRRRVLIAFEQAELEE-NPAERD 155
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDRL 139
LL ++G GPTGVE +G +++ R + + + + V L+EA IL +F ++L
Sbjct: 156 ALLTFTIIGAGPTGVELAGIIAEMAHRTLPGEFRRIDTRLARVVLVEAGPRILPAFSEKL 215
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA+ +L K GV + G +++ + + VP LVW+ GV S K + +
Sbjct: 216 SAYASRELEKLGVEVRTGTPVTNCTEEGVTIGESFVPSRTLVWAAGVQASPAAKWVGVEA 275
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR + L P ++F VGD + ++ GK V P +A A++QG Y+ ++
Sbjct: 276 DRAGRAKVGPDLSAPDHPNIFIVGDTASVIQGDGKPV-PGIAPAAKQQGAYVAQVIR--C 332
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+ GG A PF YRH GS+ATIG+ A++D + K L G L+W +W
Sbjct: 333 RLGGSPAPG--------PFRYRHQGSLATIGKRAAIIDFGRIK------LKGSLAWWIWG 378
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R+RF VA +W T++ G+ +R+
Sbjct: 379 IAHIYFLIGTRSRFAVAWSWLWTYLSGQHSARL 411
>gi|386822424|ref|ZP_10109639.1| NADH dehydrogenase, FAD-containing subunit [Joostella marina DSM
19592]
gi|386423670|gb|EIJ37501.1| NADH dehydrogenase, FAD-containing subunit [Joostella marina DSM
19592]
Length = 451
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 167/333 (50%), Gaps = 37/333 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LV+A GA + FG+ V EN+ ++++ + IR +L NL + + +E+
Sbjct: 120 VSYDYLVLATGATTNFFGMDSVAENSLGMKDIRDSLNIRHMMLQNLEQAAIT-CDNKERD 178
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NEILS 133
L + V+VGGGP GVE +G L++F +Y KDY +++ LIEA +E+LS
Sbjct: 179 ALTNFVIVGGGPAGVEMAGALAEFC------KYILPKDYPEYPASIMNIYLIEAIDELLS 232
Query: 134 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
+ D+ L V+ L+ V + D +++ + L+W+ GV
Sbjct: 233 TMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGKEVTTKSDKTILAKNLIWTAGV-KGQFP 291
Query: 193 KSLDLPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+D G RI + L+V +++FA+GD + + P +AQ A +QGKYL
Sbjct: 292 NGIDGKHVVRGNRIKTNANLKVEGYENIFAIGDIAALISKETPKGHPQVAQTAIQQGKYL 351
Query: 252 -FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
S+LN I S K PF Y+ GS+AT+G+ KA+ DL + K A
Sbjct: 352 GDSILNIINN------KSIK------PFKYKDKGSLATVGKRKAVADLGKFK------FA 393
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G+ +WL+W +L + +RNR V NWA ++
Sbjct: 394 GYFAWLLWSVVHLMSISGFRNRLMVGFNWAVSY 426
>gi|408370711|ref|ZP_11168486.1| NADH dehydrogenase [Galbibacter sp. ck-I2-15]
gi|407743948|gb|EKF55520.1| NADH dehydrogenase [Galbibacter sp. ck-I2-15]
Length = 451
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 23/344 (6%)
Query: 4 HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
E + + T+ K +SYD LV+A G + FG+ V EN+ ++++ + IR +
Sbjct: 102 EVEEIQPDSNTILTNKGSVSYDYLVLATGTTTNFFGMDSVAENSLGMKDIRDSLNIRHMM 161
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-H 122
L NL + + ++E+ L + V+VGGGP GVE +G L++F + + Y I +
Sbjct: 162 LQNLEQAAIT-CDDKERDALTNFVIVGGGPAGVEMAGALAEFCKYILPKDYPEYPSSIMN 220
Query: 123 VTLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLL 180
+ LIEA +E+L + D+ L V+ L+ V + D ++ + L
Sbjct: 221 IYLIEAIDELLGTMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGNEVTTKSDKTILAKNL 280
Query: 181 VWSTGVGPSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+W+ GV +D G RI D L+V +++FA+GD + + P
Sbjct: 281 IWTAGV-KGQFPNGIDEKHIVRGNRIKTDANLKVEGYENIFAIGDIAALISEERPKGHPQ 339
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
+AQ A +QGK+L L +I K E PF Y+ GS+AT+G+ KA+ DL
Sbjct: 340 VAQAAIQQGKWLGDSLLKIIKN-----------EAPKPFEYKDKGSLATVGKRKAVADLG 388
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ + AG+ +WL+W +L + +RNR V NWA ++
Sbjct: 389 K------MKFAGYFAWLLWSIVHLMSISGFRNRLMVGFNWAVSY 426
>gi|325928674|ref|ZP_08189849.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas perforans
91-118]
gi|346726596|ref|YP_004853265.1| NADH dehydrogenase [Xanthomonas axonopodis pv. citrumelo F1]
gi|325540952|gb|EGD12519.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas perforans
91-118]
gi|346651343|gb|AEO43967.1| NADH dehydrogenase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 430
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 102 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 161 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDL 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 221 TAKARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 280 LDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 330
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 331 AKAIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 381 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|409438829|ref|ZP_11265892.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium mesoamericanum STM3625]
gi|408749489|emb|CCM77068.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium mesoamericanum STM3625]
Length = 423
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 172/336 (51%), Gaps = 22/336 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ YD LV+A GA + FG + A L+ + A IRR+LLL ++
Sbjct: 94 MTLRYDTLVLATGATHAYFGRDEWEPVAPGLKTLEDATTIRRRLLLAFERAETE-TDAAI 152
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
+ LL +VG GPTGVE +G +++ + + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELARKTLPREFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA+ L + GV L G V + ++ + + G +P +VW+ GV S K LD
Sbjct: 213 ELSAYASQALQELGVELHIGERVVECTTEGVETSQGF-IPSHTIVWAAGVQASPAAKWLD 271
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ GR+ +++ L P DVF VGD + +++ G V P +A A++QG Y ++
Sbjct: 272 VAADRAGRVVVEKDLTAPGYPDVFVVGDTAAVMQTGGAPV-PGIAPAAKQQGAYAAKVI- 329
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
RA A D PF YRH GS+ATIG+ A++D + K L G+++W
Sbjct: 330 --------RARLAGD-PAPPPFCYRHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 410
>gi|319778063|ref|YP_004134493.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317171782|gb|ADV15319.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 464
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 173/321 (53%), Gaps = 22/321 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A G++ F L+ + A+ IR +LLL+ ++ E+S
Sbjct: 111 VPYDLLVLATGSQPFYFSQESWARVCPGLKSIEDARTIRSRLLLSFEHAER-TTDPVEQS 169
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDRL 139
RL+ ++GGGPTGVE +G +++ + + + +++ + + L+EA N +L+ F L
Sbjct: 170 RLMTIAIIGGGPTGVELAGSIAELSRHTLARDFRNIRPEKTKIILVEAGNRLLAGFAPEL 229
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
YA +L GV + + V+ +++QK+ + G +P L +W+ GV S L L +
Sbjct: 230 SEYARLRLESLGVDVALDSRVEAIEAQKITVG-GKVIPVALTLWAAGVAASPLAAQLGVG 288
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GGR+ + L+V D+FA+GD + +L+ G+ LP LAQVA++QG++L
Sbjct: 289 LDRGGRVKVGSDLQVMGRSDIFALGDVALFLDENGQP-LPGLAQVAKQQGEHL------- 340
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
GKA R ++ +D+ FV+R+ G+ A +GR+ A+ ES L L G+ +W W
Sbjct: 341 GKALARRTDTGEDLPA---FVFRNRGNTAIVGRHAAVF------ESGRLKLKGWFAWSAW 391
Query: 319 RSAYLTRVVSWRNRFYVAVNW 339
++ +V +++R V++ W
Sbjct: 392 AIIHVYLLVGFQHRVQVSIQW 412
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 80 KSRLLHCVVVGGGPTGVEFSGELS------DFIMRDVRQRYSHVKDYIHVTLIEANEILS 133
+S + VVVGGG G+E + L I R + + + + A +I
Sbjct: 15 RSMIPRIVVVGGGFAGLEVAKALGGAEIGVTIIDRHNHHLFQPLLYQVATAALSAPDIAE 74
Query: 134 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188
L Y + Q+ V + D +++ L+L DGT VPY LLV +TG P
Sbjct: 75 PIRKILGRYPSVQVLFGNVAKI-----DTEARILVLADGTTVPYDLLVLATGSQP 124
>gi|218886009|ref|YP_002435330.1| NADH dehydrogenase (ubiquinone) [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756963|gb|ACL07862.1| NADH dehydrogenase (ubiquinone) [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 452
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 170/330 (51%), Gaps = 30/330 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L++A G+ S FG+ G ENA L+ + A +R +L + ++E+
Sbjct: 109 IPYDHLILAPGSLTSFFGVPGATENAYTLKSLEDAVRLRNHILACFERAS---LTEDPAR 165
Query: 82 R--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANE-ILSSFD 136
R LL VVGGGPTGVEF+G L++ + + + + + K + L+EA + +L+ F
Sbjct: 166 RAALLTFTVVGGGPTGVEFAGALAELVRTPLARDFPELAGKTPPRIVLLEAADGLLTGFP 225
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
++LR YA +L+ GV + R V +V + L DG + + W+ GV + ++
Sbjct: 226 EQLRTYARDRLALMGVEVRTRAGVAEVGPTDVRLGDGLRIATCTVAWTAGVRGHDVAAAM 285
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
LP GGR+ + L+V ++ VGD + G+ P +A A +QG++ + +
Sbjct: 286 GLPVGRGGRVPVLPTLQVDGHPEIQVVGDLA---LPDGQNP-PMIAPNATQQGRHAAANV 341
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K G + PF YR G+MATIGR A+V L + + +G +W
Sbjct: 342 LRLLKGGTAK-----------PFRYRDKGAMATIGRQAAVVRLGR------FAFSGLWAW 384
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
++W +L ++ +RNR +V VNWA ++F
Sbjct: 385 VLWLFVHLAYLIGFRNRLFVLVNWAWDYLF 414
>gi|281426140|ref|ZP_06257053.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oris
F0302]
gi|281399716|gb|EFB30547.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oris
F0302]
Length = 424
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 167/326 (51%), Gaps = 22/326 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA + FG ++ +A ++ V A +R +L NL ++ +E +
Sbjct: 102 IHYDDLVLAAGATTNFFGNKNIEASALPMKSVSEAMRLRNTILQNLERAETED-NEARRQ 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDRL 139
L++ +VGGGP+GVE +G L++ + + Y + + + LI A +L + ++
Sbjct: 161 ALMNIAIVGGGPSGVEIAGALAEMKRTILPRDYPDLDTSCMRIYLINAAPRLLGAMAEKS 220
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
H A L + GV ++ G +V D +LIL DG+ +P ++W +G+ + +
Sbjct: 221 SHEAEKALKELGVEIMAGCMVTDYVDHELILKDGSHLPVETVIWVSGIRANHIDGIPAES 280
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GGRI D + RV +++V+A+GD C + P LAQVA +Q + L L R
Sbjct: 281 IGRGGRIITDRFNRVKGMENVYAIGDQCLIEGDEAYPQGHPQLAQVAMQQAENLAMNLKR 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
K E PF YR+LG+MATIGR KA+V++ + L GF +WL+
Sbjct: 341 QDKN-----------EQEHPFSYRNLGTMATIGRKKAVVEIGR------LKFGGFFAWLL 383
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTF 343
W +L ++ RN+ V +NW ++
Sbjct: 384 WLVVHLRSILGVRNKTIVFLNWMWSY 409
>gi|381170735|ref|ZP_09879889.1| FAD dependent oxidoreductase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688787|emb|CCG36376.1| FAD dependent oxidoreductase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 417
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 89 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 147
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 148 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDL 207
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 208 TAKARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 266
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 267 LDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 317
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 318 AKAIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFW 367
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 368 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|359725878|ref|ZP_09264574.1| NADH dehydrogenase [Leptospira weilii str. 2006001855]
gi|417781937|ref|ZP_12429672.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira weilii
str. 2006001853]
gi|410777922|gb|EKR62565.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira weilii
str. 2006001853]
Length = 423
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 177/334 (52%), Gaps = 23/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E K+
Sbjct: 99 INYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKA 158
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRL 139
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L +FD L
Sbjct: 159 -LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLMTFDPSL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+ +L GV ++ G V D++ + + L +G +P G ++W+ GV + + +L +
Sbjct: 218 GEFTKKRLESRGVEVLTGTRVIDINERGVQL-EGKMIPTGTVIWAAGVQANGIASTLGVT 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GGR+ +DE+ V +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 277 LDRGGRVIVDEFCNVEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQGRYVAALIQ-- 333
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
G R K F Y GSMATIGR A+ + L + G WL W
Sbjct: 334 ---GDLRNKKRKS------FRYVDKGSMATIGRTDAVAQVGV------LKMKGLFGWLAW 378
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 379 LFVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|429736929|ref|ZP_19270804.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. oral
taxon 138 str. F0429]
gi|429153711|gb|EKX96484.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. oral
taxon 138 str. F0429]
Length = 428
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 168/355 (47%), Gaps = 24/355 (6%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
+ E R L +ISYD LV+A GA + FG V N+ ++ + A +R ++
Sbjct: 82 IDQERRVLITKHGEISYDYLVLAAGATTNFFGNESVARNSYAMKTLQEAIALRGHIIHEF 141
Query: 68 MLSDVPGISE--EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHV 123
+ + E + R L+ V+VGGG TG+E +G L + I D+ ++ H D+ +HV
Sbjct: 142 ERAARKCGPDQWEARQRHLNFVIVGGGATGIEMAGALMELI--DIFKKEFHTIDFKEVHV 199
Query: 124 TLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLV 181
TL+EA +L L+ + L K GV + + V + D L LN+G +P ++
Sbjct: 200 TLLEAMGSVLPMVPPDLQQHTIDVLRKKGVDVRLNTAVTEYDGNDLKLNNGEVIPTKTVI 259
Query: 182 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY----LESTGKTVL 237
W+ GV +K GR+ ++E L V +FA+GDC+ + LE TV
Sbjct: 260 WAAGVRAQDFIKDCGAEVDRAGRVIVEENLLVKGSDRIFAIGDCANFQHGGLERPLPTVA 319
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 297
P Q A + K + +L+ + K + + FVY LG+MATIGR +A+++
Sbjct: 320 PVATQEAMQVKKNIMALI------------AGKTPDQLEKFVYHDLGAMATIGRGEAVMN 367
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L GF +W W +L R+ F V++ W F FG ++RI
Sbjct: 368 GPMPGLGFMLKAKGFFAWFAWMLVHLVRLAGRYADFTVSIKWIWNFFFGTRLARI 422
>gi|424919003|ref|ZP_18342367.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|392855179|gb|EJB07700.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM597]
Length = 421
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 176/340 (51%), Gaps = 30/340 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL----MLSDVPGI 75
+ YD LV+A GA + FG + A L+ + A IRR++LL M SD P +
Sbjct: 94 MTLGYDTLVLATGATHAYFGRDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMESD-PAV 152
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 133
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L
Sbjct: 153 ----RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLP 208
Query: 134 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
+F + L YA T L K GV + G V D ++ + + + T V +VW+ GV S
Sbjct: 209 TFAEELSAYAQTALEKLGVEIHLGRPVTDCNADGVKIGE-TFVASRTIVWAAGVTASPAA 267
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
+ L++P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+
Sbjct: 268 RWLNVPADRAGRVVVEKDLSAPGLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVA 326
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
++ + G A + PF YRH GS+ATIG+ A++D + K L G+
Sbjct: 327 KVIR--ARLSGKSAPA--------PFRYRHQGSLATIGQSAAIIDFGRIK------LKGW 370
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 371 IAWWIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|373460111|ref|ZP_09551868.1| hypothetical protein HMPREF9944_00132 [Prevotella maculosa OT 289]
gi|371956597|gb|EHO74381.1| hypothetical protein HMPREF9944_00132 [Prevotella maculosa OT 289]
Length = 424
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 167/326 (51%), Gaps = 30/326 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA + FG ++ +A ++ V A +R +L NL ++ E ++
Sbjct: 102 IHYDDLVLAAGATTNFFGNKNIEASALSMKTVGEAMRLRNTILQNLERAETED-DEVKRQ 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDRL 139
RLL +VGGGP+GVE +G L++ + + Y + +H+ LI A +L + D++
Sbjct: 161 RLLTIAIVGGGPSGVEIAGALAEMRRTIIPRDYPDLNASEMHIYLINAGPRLLGAMDEKS 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL----VKS 194
H A L + GV ++ V D + LIL DG + ++W +G+ + + V+S
Sbjct: 221 SHKAEKALKELGVEIIADCRVTDYQNHSLILEDGDFIHAETVIWVSGIKANRIEGIPVES 280
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFS 253
+ GGRI D + RV + +V+A+GD C + P LAQVA +Q +
Sbjct: 281 I----GHGGRILTDSFNRVKGMTNVYAIGDQCLVEGDEAYPQGHPQLAQVALQQAANVAR 336
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
L GR SA+ PFVYR+ G+MATIGR KA+V++ + L GF
Sbjct: 337 NL-----IAAGRGRSAR------PFVYRNPGTMATIGRKKAVVEIGK------LKFGGFF 379
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNW 339
+WL+W +L ++ RN+ V +NW
Sbjct: 380 AWLLWLVVHLRSILGVRNKTVVFLNW 405
>gi|418515545|ref|ZP_13081725.1| NADH dehydrogenase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|418523025|ref|ZP_13089052.1| NADH dehydrogenase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410700500|gb|EKQ59053.1| NADH dehydrogenase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410707843|gb|EKQ66293.1| NADH dehydrogenase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 430
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 102 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 161 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDL 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 221 TAKARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 280 LDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 330
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 331 AKAIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 381 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|294626533|ref|ZP_06705132.1| NADH dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292599223|gb|EFF43361.1| NADH dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 430
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 102 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 161 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDL 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 221 TAKARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 280 LDRAGRVLVEANLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 330
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 331 AKAIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 381 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|386772391|ref|ZP_10094769.1| NADH dehydrogenase, FAD-containing subunit [Brachybacterium
paraconglomeratum LC44]
Length = 479
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 171/328 (52%), Gaps = 31/328 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG G +E+A + + IR ++ L S G++ ++
Sbjct: 116 ELSYDYLVLANGATTTYFGTPGAEEHAMPMYTRAQSLAIRDRVFSELERSSREAGVTHDK 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIE-ANEILSSFDD 137
LH +VGGGPTGVE +G L+DF M+++ Y + + +T+++ +E+L F D
Sbjct: 176 ----LHVCIVGGGPTGVEIAGALADFRMQELDILYPEMDPGTLQLTVLQRGDELLKEFSD 231
Query: 138 RLRHYATTQLSKSGV--RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ R YA +L GV RL G VK+V +IL+DG+ + + +W+ GV V
Sbjct: 232 KYRQYAADELRDRGVVLRLGHG-VKEVGYDHVILDDGSILESDITIWAAGVAIPEAVSRW 290
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
LP+ GRI +D+ L+V + V+A GD + E+ LP LAQ A + G ++
Sbjct: 291 GLPQDSRGRIAVDDHLQVKGMPGVYAAGDVAAQDEA-----LPQLAQPAIQTGS---AVA 342
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
I G+ F Y +LG+MATIGR+ A+ ++ GLS G L W
Sbjct: 343 KSIAADVKGKQRPT--------FTYTNLGTMATIGRHAAIAEI---PVLGGLS--GSLGW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTF 343
W ++T+++ RN+ VA+N + +
Sbjct: 390 AAWLGVHITKMLGHRNQRAVAMNLVSLY 417
>gi|389749160|gb|EIM90337.1| mitochondrial NADH dehydrogenase [Stereum hirsutum FP-91666 SS1]
Length = 666
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 191/443 (43%), Gaps = 108/443 (24%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
V E+ + F + YDKLVIA+G+ +ST G+ G+ EN L+ V AQ IRR++L N
Sbjct: 234 VESEMPDGQKRNFYVPYDKLVIAVGSVSSTHGVPGL-ENCFQLKTVGDAQAIRRRVLDNF 292
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLI 126
+ +P + EE+ RLL V+ GGGPTGVE + E+ D D+ Y V++ + + +I
Sbjct: 293 ETASLPTTTPEERKRLLSFVICGGGPTGVETAAEIYDLCQEDIMNYYPKLVREEVSIHVI 352
Query: 127 EANE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-------------VKDVDSQKLILNDG 172
++ E IL+++ + + YA + + V L+ KD ++ ++ +
Sbjct: 353 QSREHILNTYSEAISKYAEDKFQRDEVNLITSARVASVHPDHVEYSAKDPETGAVVKH-- 410
Query: 173 TEVPYGLLVWSTGVG--PSTLVKSLDLP-------------------------------- 198
+P ++WSTG+ P T S LP
Sbjct: 411 -SIPTNFVLWSTGIAMNPFTARVSSLLPNQVHKKAIEVDAQLRVKGAPQGDVYAIGDCAT 469
Query: 199 -----------------KSPGGRIGIDEW--------LRVP-------SVQDVFAVGDCS 226
K+ G+I DEW ++P V+++F + D
Sbjct: 470 IETSIVSHLLDLVDEADKNKDGKIDFDEWEVMVKRIKQKIPMAESQLSEVRELFNLYDSD 529
Query: 227 G-----------YLESTGK--TVLPALAQVAERQGKYLFSLLNRIGKAG----GGRANSA 269
LE+ G T LPA AQVA +QGKYL L+ +
Sbjct: 530 ADNSLNLNELAVLLENLGNKITALPATAQVAAQQGKYLGKKLHELATHHSTLLANELPDQ 589
Query: 270 KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSW 329
D + PFVY+HLG +A IG A+ DL + G ++ WRS Y VS
Sbjct: 590 PDEAVARPFVYKHLGMLAYIGN-AAVFDLGNMS-----FMGGLVAMYAWRSVYWNEQVSL 643
Query: 330 RNRFYVAVNWATTFVFGRDISRI 352
R R + ++W V+GRD+SR+
Sbjct: 644 RTRALLMIDWIVRGVWGRDLSRL 666
>gi|377575419|ref|ZP_09804413.1| putative NADH dehydrogenase [Mobilicoccus pelagius NBRC 104925]
gi|377535996|dbj|GAB49578.1| putative NADH dehydrogenase [Mobilicoccus pelagius NBRC 104925]
Length = 431
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 162/336 (48%), Gaps = 29/336 (8%)
Query: 9 TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 68
T+ R L I YD LV+A GA + FGI G KENA + A +R L L
Sbjct: 83 TENKRVLTNRGEPIPYDTLVLAQGAGPNFFGIPGAKENARTIYSRAEALAVRDLLFSGLE 142
Query: 69 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE 127
++ ++ R +VVGGG TGVE +G L++ + Y + +D V L E
Sbjct: 143 QM----TTQPDRERRFTVLVVGGGATGVEMAGTLAEMKSEAIPVVYPELSQDSFRVVLAE 198
Query: 128 -ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTG 185
A+ +++ FD RL+ Y QL K GV + G VK+V + DG+ + L++W++G
Sbjct: 199 MADTLVAPFDPRLQRYTLHQLRKRGVDIRLGTAVKEVRPDSVDFADGSTMDVDLVIWASG 258
Query: 186 VGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
G V +P+ GGRI ++ L+V D++A+GD + +E + LP LAQ A
Sbjct: 259 FGAHPEVSEWGMPQGRGGRIEVEPNLQVKGHPDIYAIGDAA--IEP--GSPLPQLAQPAM 314
Query: 246 RQGKYLFSLLNRIGKAGGGRANSAKDMELGD-PFVYRHLGSMATIGRYKALVDLRQNKES 304
+ G ++ GR A D L PF Y G+MATIGR A+
Sbjct: 315 QMGSHV------------GREIVAADKGLPPTPFGYDDKGTMATIGRNAAVAQF-----P 357
Query: 305 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 340
G ++ GF +W +W +L ++ RNR VN A
Sbjct: 358 SGRTVTGFPAWALWVGVHLATLLGGRNRLQAMVNTA 393
>gi|390990453|ref|ZP_10260738.1| FAD dependent oxidoreductase family protein [Xanthomonas axonopodis
pv. punicae str. LMG 859]
gi|372554776|emb|CCF67713.1| FAD dependent oxidoreductase family protein [Xanthomonas axonopodis
pv. punicae str. LMG 859]
Length = 417
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 89 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 147
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 148 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDL 207
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L GT VP +VW+ GV S L ++L +P
Sbjct: 208 TAKARKQLERLGVEVHTGTPVTQIDALGYQLG-GTFVPARTVVWAAGVAASPLARTLGVP 266
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 267 LDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 317
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 318 AKAIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFW 367
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 368 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|323336133|gb|EGA77404.1| Ndi1p [Saccharomyces cerevisiae Vin13]
Length = 471
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 194/361 (53%), Gaps = 33/361 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + I YD L+ A+GAE +TF I GV + FL+E+ ++ EIRR NL ++
Sbjct: 117 LHQAEPAE--IKYDYLISAVGAEPNTFXIPGVTDYGHFLKEIPNSLEIRRTFAANLEKAN 174
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + L+EA I
Sbjct: 175 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAXEVQIHLVEALPI 234
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 235 VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 294
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++++L+V ++FA+GD + L
Sbjct: 295 WATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGL 347
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRA--NSAKD-MELG------DPFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + +S KD ++L PF Y LG++A
Sbjct: 348 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKXJSSRKDKIDLXFEENNFKPFKYNDLGALAY 407
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 408 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 466
Query: 349 I 349
Sbjct: 467 F 467
>gi|390954895|ref|YP_006418653.1| NADH dehydrogenase, FAD-containing subunit [Aequorivita
sublithincola DSM 14238]
gi|390420881|gb|AFL81638.1| NADH dehydrogenase, FAD-containing subunit [Aequorivita
sublithincola DSM 14238]
Length = 423
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 168/346 (48%), Gaps = 24/346 (6%)
Query: 4 HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
E + E ++ + YD LV+A G + FG + +N+ ++ V A IR +
Sbjct: 82 EVENINTENNSIATSIGNLRYDYLVLATGTRTNFFGNESIAKNSMPMKTVPQALNIRSLM 141
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIH 122
L N+ ++D+ E E+ RLL+ V+ G GPTGVE +G L++F + Y + +D ++
Sbjct: 142 LQNIEMADIT-TDEVERKRLLNFVIAGAGPTGVELAGALAEFRKGILENDYPELDEDEMN 200
Query: 123 VTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL 180
V LIE N +L + + A L K GV+L + ++ D D + + DG +
Sbjct: 201 VHLIEGQNRVLPPMSEAVSKKAQKYLEKLGVQLHLETLISDFDGKTVTTKDGKKFETATF 260
Query: 181 VWSTGVGPSTLVKSLDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+W+ GV LVK +D R +DE+ ++ S +++A+GD + P
Sbjct: 261 IWAAGV-TGALVKGIDGEALVEKANRYKVDEFNKIVSFNNIYALGDIALMETKEYPKGHP 319
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+AQ A +QGK L ++ K E +PF Y G+MAT+GR KA+VD+
Sbjct: 320 QVAQPAIQQGKNLGKNFKKMLKG-----------EKLEPFKYFDKGTMATVGRNKAVVDI 368
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+ + G ++W +W +L +V +RNR NW +++
Sbjct: 369 GK------MHFGGAIAWFLWMFVHLWFLVGFRNRVVTFFNWTYSYI 408
>gi|403216912|emb|CCK71408.1| hypothetical protein KNAG_0G03500 [Kazachstania naganishii CBS
8797]
Length = 566
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 187/353 (52%), Gaps = 31/353 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+I YD L+ A+GAE +TFG+ GV+E FL+E+ + IR+ N+ ++ + E
Sbjct: 218 LEIKYDYLISAVGAEPNTFGVPGVEEYGHFLKEIPDSLAIRKVFAKNMERANFLPEGDPE 277
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDR 138
+ RLL VVVGGGPTGVE +GEL D++ +++++ + + + L+EA I L+ F+ +
Sbjct: 278 RKRLLSIVVVGGGPTGVETAGELQDYVTQELQKFLPSLAKEVQIHLVEALPIVLNMFEKK 337
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPS 189
L YA L K+ ++L +R V V+ + L DGT ++PYG L+W+TG
Sbjct: 338 LSSYAQEVLEKTSIKLHLRTAVSKVEEKHLTAKTKHADGTVTEQQIPYGTLIWATGNKMR 397
Query: 190 TLVKSL--DLP--KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+ K L +P K+ + ++ +L V ++FAVGD + ++ LP AQVA
Sbjct: 398 AIAKDLTTKIPEQKNSTRALTVNPFLLVKGSNNIFAVGD-NAFIG------LPPTAQVAH 450
Query: 246 RQGKYL---FSLLNRIGKAGGGRANSAKDMEL------GDPFVYRHLGSMATIGRYKALV 296
++ +YL F + RI N ++L PF Y H G++A +G KA+
Sbjct: 451 QEAEYLCKVFDKMARIPDFHQTLKNRTDKVDLLFEENKFKPFKYIHYGALAYLGAEKAIA 510
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
++ K + + G ++ VWR YL+ ++S R RF V ++W F RD
Sbjct: 511 NITYGKRNL-YTGGGIFTFYVWRLVYLSMLLSARTRFKVIIDWMKITFFKRDF 562
>gi|224126789|ref|XP_002319927.1| predicted protein [Populus trichocarpa]
gi|222858303|gb|EEE95850.1| predicted protein [Populus trichocarpa]
Length = 579
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 146/235 (62%), Gaps = 12/235 (5%)
Query: 2 KVHCETVTDELRTLEPWK-FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
KV+C + ++ TL+ + F + YD L++A+GA +TF GV+E+A FL+EV AQ +R
Sbjct: 142 KVYCRS--NQSSTLDGIEEFTVDYDVLILAMGARVNTFNTPGVEEHAHFLKEVGDAQRLR 199
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
+ ++ + +P +SEEEK R++H VVVGGGPTGVE++ EL D D+ + Y KDY
Sbjct: 200 KSIIDCYERASLPSVSEEEKKRVMHFVVVGGGPTGVEYAAELHDLAFDDMAKLYPSAKDY 259
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGT 173
+ +TL+EA + IL+ FD R+ +AT + + G+ + G + KD+ +++ +
Sbjct: 260 LKITLLEAGDHILNMFDKRITTFATEKFQRDGIDVKTGSMVVKVSDKDISTKERKTGEIV 319
Query: 174 EVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
VPYG+++WSTG+ +V+ + ++ + DEWLRV +DV+A+GDC+
Sbjct: 320 SVPYGVVLWSTGIATRPVVRDFMNHIDQAKRRVLATDEWLRVEGCEDVYALGDCA 374
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 237 LPALAQVAERQGKYLFSLLNRI-----GKAGGGRANSAKDMELGDPFVYRHLGSMATIGR 291
LP AQVA +QG+YL NR G R ++ + PF YRH G A +G
Sbjct: 465 LPPTAQVAAQQGEYLAKCFNRKELCEKNPEGPLRFRASGRHQF-HPFRYRHFGQFAPLGG 523
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ L + S G S WL W S Y +++VSWR R V +W+ F+FGRD S+
Sbjct: 524 EQTAAQLPGDWVSIGHSA----QWL-WYSVYASKLVSWRTRMLVISDWSRKFIFGRDSSK 578
Query: 352 I 352
I
Sbjct: 579 I 579
>gi|294665100|ref|ZP_06730404.1| NADH dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292605142|gb|EFF48489.1| NADH dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 430
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 102 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 161 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDL 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 221 TAKARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 280 LDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 330
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 331 AKAIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 381 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|395206353|ref|ZP_10396919.1| putative NADH dehydrogenase [Propionibacterium humerusii P08]
gi|422441873|ref|ZP_16518682.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA3]
gi|422473198|ref|ZP_16549679.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA2]
gi|422573484|ref|ZP_16649046.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL044PA1]
gi|313835296|gb|EFS73010.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA2]
gi|314928246|gb|EFS92077.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL044PA1]
gi|314970077|gb|EFT14175.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA3]
gi|328905945|gb|EGG25721.1| putative NADH dehydrogenase [Propionibacterium humerusii P08]
Length = 460
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 167/338 (49%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV++ G A+ FG G EN+ + A +R + + L D+ + ++
Sbjct: 119 LPYDYLVLSQGVGANFFGTPGAAENSYTI--YTRASSLRARDAIFTYLEDL----DTQRD 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ + ++VGGGPTGVE +G L++ + + +V D +HVTL+E A+ +L FD L
Sbjct: 173 KTVDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPNVSTDRVHVTLVEMADHLLMPFDPAL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + + +V ++L DG +P +++W+ GVG V +
Sbjct: 233 RHYTRRQLQKRGVDVRTKTAIAEVRDDSVLLKDGQTLPADMVIWAAGVGAHESVANWGFE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI + L V VFAVGD G + + T P LAQ A + G+ +
Sbjct: 293 QGHGGRIATNGTLLVNGQDRVFAVGD--GAINTEDPT--PQLAQPAIQGGECV------- 341
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y G+MATIGR A+V L S+ L G +W
Sbjct: 342 -------ARQIIHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFTGIGAW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W + ++ ++ RNR +N ++ F R+ I
Sbjct: 390 LTWVTVHIYTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|257069847|ref|YP_003156102.1| NADH dehydrogenase, FAD-containing subunit [Brachybacterium faecium
DSM 4810]
gi|256560665|gb|ACU86512.1| NADH dehydrogenase, FAD-containing subunit [Brachybacterium faecium
DSM 4810]
Length = 483
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 162/323 (50%), Gaps = 27/323 (8%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+ +I YD L++A GA + FG G +E+A + A IR ++ L S
Sbjct: 116 RHEIGYDYLIVANGATTTYFGTPGAEEHAMPMYTRSQALAIRDRIFSELERSSREAGQSH 175
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIE-ANEILSSFD 136
+K LH +VGGGPTGVE +G L+DF M+++ Y + + VT+++ +E+L F
Sbjct: 176 DK---LHVCIVGGGPTGVEIAGALADFRMQELDILYPEMDPGTLQVTVLQRGDELLKEFS 232
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ R YA +L GV L G VK+V ++L+DG+ + + +W+ GV V
Sbjct: 233 TKYRQYAADELRDRGVTLQLGRGVKEVGYDHVVLDDGSILESDITIWAAGVAIPKSVSEW 292
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
P+ GR+ +D++L+V V+A GD +G E LP LAQ A + G+ +
Sbjct: 293 GFPQDKRGRLAVDDYLQVKGFPGVYAAGDIAGQDEP-----LPQLAQPAIQTGE---AAA 344
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
I G+ F Y +LG+MATIGR+ A+ ++ GLS G + W
Sbjct: 345 RNIAAEVAGKPRKT--------FAYTNLGTMATIGRHAAIAEI---PVLGGLS--GSVGW 391
Query: 316 LVWRSAYLTRVVSWRNRFYVAVN 338
W ++ +++ RN+ VA+N
Sbjct: 392 AAWLGVHIMKMIGHRNQRAVAMN 414
>gi|440227018|ref|YP_007334109.1| NADH dehydrogenase protein [Rhizobium tropici CIAT 899]
gi|440038529|gb|AGB71563.1| NADH dehydrogenase protein [Rhizobium tropici CIAT 899]
Length = 420
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 170/338 (50%), Gaps = 28/338 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISE 77
KI YD LV+A GA + FG + A L+ + A IRR+LLL +++ P + E
Sbjct: 95 KIHYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRLLLAFEQAEMETDPTVRE 154
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSF 135
LL V+VG GPTGVE +G +S+ + + + ++ + L+EA +L +F
Sbjct: 155 A----LLTFVIVGAGPTGVELAGIISELARTTLPKEFRNIDTRKAKIILVEAGPRVLPAF 210
Query: 136 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
L YA +L GV + G V ++ + + D T VP +VW+ GV S K
Sbjct: 211 AQELSDYAHKELELLGVDVRFGRPVTSCTAEGVTIGD-TFVPCRTIVWAAGVEASPAAKW 269
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
L +P GR +D+ LR P ++D+F +GD + + G V P +A A++QG Y+ +
Sbjct: 270 LGIPADRAGRAIVDKDLRAPGMEDIFIIGDTAAVMRDDGSPV-PGIAPAAKQQGAYVAKV 328
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
I GR + PF YRH GS+ATIG+ A++D K L G+L+
Sbjct: 329 ---IKAKLAGRPSPG-------PFHYRHQGSLATIGKSAAIIDFGWIK------LKGWLA 372
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W VW A++ ++ R R VA +W ++ + +R+
Sbjct: 373 WWVWGLAHIYFLIGVRWRIAVAWSWLWIYISRQHSARL 410
>gi|393795833|ref|ZP_10379197.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum limnia BG20]
Length = 452
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 176/352 (50%), Gaps = 46/352 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE-- 79
I YD LV+ALG+E + FG+ V++NA ++ ++ A +R + + D+ +E E
Sbjct: 105 IHYDYLVVALGSETNFFGMADVEKNAYTMKTLNDAVVLRNRAI------DMLEQAENETD 158
Query: 80 ---KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSS 134
+ L VVVGGG G+E +GEL D ++ D R+ Y + K+ I V ++EA IL
Sbjct: 159 VILRDSFLTFVVVGGGFAGIETAGELLDLLL-DARKHYHTIHKEDIRVIVLEALPMILPG 217
Query: 135 FDDRLRHYATTQLSKSGVRL--------VRGIVKDVDSQKLILNDGTE------VPYGLL 180
F+++L ++ ++ + G+ + GI +V S L D + + L
Sbjct: 218 FNEKLAKFSKEKMIERGIDIRLKTAVTSFDGIEVNVKSLDENLKDSVDKNGIDSIRTKTL 277
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
+W+ GV P +K + K+ G++ ++++L V VFA+GDC+ +++
Sbjct: 278 IWTAGVTPVNTIKR-SMLKTDKGKVIVNDFLEVTEFPGVFAIGDCALFMDPQTNRPYAPT 336
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQ+AE Q K A K+ E FVY G MA IG+ +
Sbjct: 337 AQLAEAQAKI----------AAYNLKALIKNFE-KKKFVYHSKGQMAIIGKRTGIATFL- 384
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G++++GFL+WL+WR+ YL++V +F + ++W +F RDISR+
Sbjct: 385 -----GMNISGFLAWLIWRNVYLSKVALPNKKFRIFLDWVIDILFDRDISRL 431
>gi|421066649|ref|ZP_15528225.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein, partial [Pelosinus fermentans
A12]
gi|392454100|gb|EIW30946.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein, partial [Pelosinus fermentans
A12]
Length = 362
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 177/335 (52%), Gaps = 23/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
I+YD L+IA+G + FG+ ++ N ++ + + IR +L L+ +++ +
Sbjct: 44 NIAYDYLIIAVGGMTNYFGMKSMEANGFGMKTLDESVTIRNHVLRMFELAAHEKDADKRR 103
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
+ LL V+VGGGPTGVE +G LS+ I + + Y H+ + + L+EA +++L++ +
Sbjct: 104 A-LLTFVIVGGGPTGVESAGALSELIYHVMVREYHHLNFKEVRIMLVEASDKLLATMPEE 162
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR L + V + + V D D +K+ L G +P ++W+ GV + L+ +L++
Sbjct: 163 LREVTVETLIRKHVEVRMCVQVTDYDGEKMSLKGGEVIPTHTVIWAAGVKANGLMDTLEV 222
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
++ R ++++L++P+ +VF +GD + Y++ G+ LP +A VA +Q
Sbjct: 223 EQASMRRAVVNDFLQLPNRPEVFVIGDAAHYVQ--GERPLPMIAPVAIQQADI------- 273
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
N + EL FVY+ +G+MATIGR A+V + K GF++W +
Sbjct: 274 ---TAKNIRNLIRGREL-KKFVYKDVGNMATIGRNAAVVHMGAFKTH------GFIAWSI 323
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ R++ +RNR V V W ++ + RI
Sbjct: 324 WSLVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 358
>gi|392962759|ref|ZP_10328188.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans DSM
17108]
gi|421053177|ref|ZP_15516159.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B4]
gi|421062984|ref|ZP_15525020.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B3]
gi|421073837|ref|ZP_15534886.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pelosinus fermentans A11]
gi|392437532|gb|EIW15399.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B3]
gi|392442218|gb|EIW19808.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B4]
gi|392443826|gb|EIW21335.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pelosinus fermentans A11]
gi|392452000|gb|EIW28969.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans DSM
17108]
Length = 418
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 177/335 (52%), Gaps = 23/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
I+YD L+IA+G + FG+ ++ N ++ + + IR +L L+ +++ +
Sbjct: 100 NIAYDYLIIAVGGMTNYFGMKSMEANGFGMKTLDESVTIRNHVLRMFELAAHEKDADKRR 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
+ LL V+VGGGPTGVE +G LS+ I + + Y H+ + + L+EA +++L++ +
Sbjct: 160 A-LLTFVIVGGGPTGVESAGALSELIYHVMVREYHHLNFKEVRIMLVEASDKLLATMPEE 218
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR L + V + + V D D +K+ L G +P ++W+ GV + L+ +L++
Sbjct: 219 LREVTVETLIRKHVEVRMCVQVTDYDGEKMSLKGGEVIPTHTVIWAAGVKANGLMDTLEV 278
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
++ R ++++L++P+ +VF +GD + Y++ G+ LP +A VA +Q
Sbjct: 279 EQASMRRAVVNDFLQLPNRPEVFVIGDAAHYVQ--GERPLPMIAPVAIQQADI------- 329
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
N + EL FVY+ +G+MATIGR A+V + K GF++W +
Sbjct: 330 ---TAKNIRNLIRGREL-KKFVYKDVGNMATIGRNAAVVHMGAFKTH------GFIAWSI 379
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ R++ +RNR V V W ++ + RI
Sbjct: 380 WSLVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 414
>gi|329766193|ref|ZP_08257751.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137252|gb|EGG41530.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum limnia SFB1]
Length = 415
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 177/352 (50%), Gaps = 46/352 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE-- 79
I YD LV+ALG+E + FG+ V++NA ++ ++ A +R + + D+ +E E
Sbjct: 68 IHYDYLVVALGSETNFFGMADVEKNAYTMKTLNDAVVLRNRAI------DMLEQAENETD 121
Query: 80 ---KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSS 134
+ L VVVGGG G+E +GEL D ++ D R+ Y + K+ I V ++EA IL
Sbjct: 122 VILRDSFLTFVVVGGGFAGIETAGELLDLLL-DARKHYHTIRKEDIRVIVLEALPMILPG 180
Query: 135 FDDRLRHYATTQLSKSGV--RLVRGI---------VKDVDSQ---KLILNDGTEVPYGLL 180
F+++L ++ +L + G+ RL + VK +D + N+ + L
Sbjct: 181 FNEKLAKFSKEKLIERGIDIRLKTAVTSFDGIEVNVKSLDENVKDSIDKNEIDSIRTKTL 240
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
+W+ GV P +K + K+ G++ ++++L V VFA+GDC+ +++
Sbjct: 241 IWTAGVTPVNTIKR-SMLKTDKGKVIVNDFLEVTEFPGVFAIGDCALFMDPQTNRPYAPT 299
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQ+AE Q K A K+ E FVY G MA IG+ +
Sbjct: 300 AQLAEAQAKI----------AAYNLKALIKNFE-KKKFVYHSKGQMAIIGKRTGIATFL- 347
Query: 301 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G++++GFL+WL+WR+ YL++V +F + ++W +F RDISR+
Sbjct: 348 -----GMNISGFLAWLIWRNVYLSKVALPNKKFRIFLDWIIDILFDRDISRL 394
>gi|452751029|ref|ZP_21950775.1| NADH dehydrogenase [alpha proteobacterium JLT2015]
gi|451961179|gb|EMD83589.1| NADH dehydrogenase [alpha proteobacterium JLT2015]
Length = 434
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 167/331 (50%), Gaps = 23/331 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+A GA S FG +E+A L+ + A IR +LL ++ E +
Sbjct: 97 RLPYDYLVLATGAAYSFFGHDEWREHAMVLKSLEDALAIRARLLDAFERAEQSSDPAETR 156
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDDR 138
RLL +VGGGPTGVE +G +++ + + ++ + V L EA E +LS+FD
Sbjct: 157 -RLLTFAIVGGGPTGVELAGTIAELARTTLARDFTCIDPQGTRVVLCEAGERLLSAFDPA 215
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA L+ GV + G V+ +DS L+L + + G ++W G + L
Sbjct: 216 LSAYAADALASLGVEVRTGTAVEAIDSTGLMLGE-ERIDAGAVLWCAGTEARPAARWLGA 274
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
+ G + ++ VP ++FA+GD + + G+ LP LA VA++QG ++ LL
Sbjct: 275 EAARNGAVQVETDCSVPGHPEIFAIGDVASFDGGEGRP-LPGLAPVAKQQGAHVGRLLA- 332
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
A A E G F YR G+MA IGR +A+ L G+ L GF++WL
Sbjct: 333 --------ARVAGRSEPG-AFRYRDHGTMAVIGRARAVARL------GGMQLKGFVAWLA 377
Query: 318 WRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 347
W +L +V +R+R V VNW+ F +GR
Sbjct: 378 WSLVHLLLLVDFRSRLLVYVNWSWAWFTYGR 408
>gi|255553901|ref|XP_002517991.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
gi|223542973|gb|EEF44509.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
Length = 579
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 140/235 (59%), Gaps = 12/235 (5%)
Query: 2 KVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
K+HC + L E +F + YD LV+A+GA ++TF GV E A FL+EV AQ+IR
Sbjct: 142 KIHCRSRHAKNLGGTE--EFTMDYDLLVVAMGASSNTFNTPGVLEYAHFLKEVEDAQKIR 199
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
+ ++ + +P ISEEEK R++H VVVGGGPTGVE++ EL DF D+ + Y V+D+
Sbjct: 200 KSIIDCYERASLPNISEEEKKRIMHFVVVGGGPTGVEYAAELHDFAFEDLARLYPSVRDH 259
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGT 173
+ +TL+EA + IL+ FD R+ +A + S+ G+ + G + +D+ ++
Sbjct: 260 LRITLLEAGDHILNMFDVRITKFAMEKFSRDGIDVKTGSMVIKVNERDISTKDRRTGQTV 319
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
+PYG+++WSTGV ++K G R + DEWLRV ++A+GDC+
Sbjct: 320 SIPYGMVLWSTGVATRPVIKEFMHQIGQGNRRVLATDEWLRVEGCDTIYALGDCA 374
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL NR+ + + G PF Y+H G A +G
Sbjct: 465 LPATAQVAAQQGEYLAKCFNRMEQCEKYPEGPIRFRGTGRHRFHPFRYKHFGQFAPLGGE 524
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y +++VSWR R V +W FVFGRD S+I
Sbjct: 525 QTAAQLPGDWVSIGHST----QWL-WYSVYASKLVSWRTRTLVISDWFRRFVFGRDSSKI 579
>gi|378776612|ref|YP_005185049.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|364507426|gb|AEW50950.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 752
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 167/341 (48%), Gaps = 33/341 (9%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
+ E R + F I YD LVIA GA S FG A L+ ++ +R +++ +
Sbjct: 406 INKEERLVIADNFTIPYDYLVIATGATHSYFGKDSWAPYAPGLKTINDGTSVRSRIIKSF 465
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 127
L+++ SEEE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H
Sbjct: 466 ELAEIAE-SEEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPAS 518
Query: 128 AN--------EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYG 178
AN IL +F +++ A L GV+ LV +V+ +DS +I+N +
Sbjct: 519 ANIILVQAAPRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSK 577
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+ W+ GV S K L L P GR+ +++ L V ++FA+GD + GK V P
Sbjct: 578 SVFWAAGVAASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-P 636
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+A A++ G Y+ ++++ R PF Y H GS+AT+GR A+ +
Sbjct: 637 GIAPAAKQGGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEF 687
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ K ++G L+W W ++ +V RNR V +NW
Sbjct: 688 DRFK------ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 722
>gi|188574759|ref|YP_001911688.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188519211|gb|ACD57156.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 417
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 89 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 147
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 148 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPEDL 207
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 208 TDKARKQLQRLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 266
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 267 LDRAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 317
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 318 AKAIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 367
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 368 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|237723110|ref|ZP_04553591.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229447632|gb|EEO53423.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 465
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 170/324 (52%), Gaps = 24/324 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G + FG ++E A ++ V A +R LL NL + + +++E+
Sbjct: 101 KAEYDYLVLAAGTTTNYFGNKHIEEEAMPMKNVSEAMGLRNALLANLERA-LTCSTKQEQ 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL+ V+VGGG TG+E +G LS+ + Y + +++ LIEA +L+ +
Sbjct: 160 QELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMNIYLIEAGPRLLAGMSEE 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T + +LD
Sbjct: 220 SSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-IGNLDA 278
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGRI +D + RV + +VFA+GD C + P LAQVA +QG+ L L
Sbjct: 279 SLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGELLAKNL 338
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K + G+ +W
Sbjct: 339 IRMEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQGWFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNW 339
++W +L ++ RN+ V +NW
Sbjct: 382 VMWLVVHLRSILGVRNKVIVLLNW 405
>gi|325913821|ref|ZP_08176180.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas vesicatoria
ATCC 35937]
gi|325539896|gb|EGD11533.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas vesicatoria
ATCC 35937]
Length = 421
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 170/334 (50%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 93 LGYDMLLLATGATHAYFGNDHWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 151
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ + + H+ V L+EA +L SF D L
Sbjct: 152 AWLSFAVVGGGPTGVELAGTLAEIARHTLNNEFRHIDPRQARVRLVEAGPRVLPSFPDDL 211
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 212 TDKARRQLERLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 270
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L VP ++F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 271 LDRAGRVLVQPDLSVPGHPEIFVGGDLAS-VQQGGRPV-PGVAPAAKQMGKH-------I 321
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 322 AKAIRARQHG----QAAAAFRYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 371
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 372 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 405
>gi|78049503|ref|YP_365678.1| NADH dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78037933|emb|CAJ25678.1| putative NADH dehydrogenase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 441
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 170/334 (50%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 113 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 171
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 172 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDL 231
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D L D T VP +VW+ GV S L ++L +P
Sbjct: 232 TAKARKQLERLGVEVHTGTPVTQIDVLGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 290
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 291 LDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 341
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 342 AKAIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 391
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 392 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 425
>gi|289664832|ref|ZP_06486413.1| NADH dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB
702]
Length = 417
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 172/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG ++A L+ ++ A +RRKLLL ++ ++
Sbjct: 89 LGYDMLLLATGATHAYFGNDHWAKHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 147
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 148 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPEDL 207
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 208 TDKARKQLERLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 266
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 267 LDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 317
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA G R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 318 AKAIGARHRG----QTTPIFRYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 367
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 368 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|328873344|gb|EGG21711.1| calcium-binding EF-hand domain-containing protein [Dictyostelium
fasciculatum]
Length = 636
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 128/222 (57%), Gaps = 12/222 (5%)
Query: 17 PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGIS 76
P KISYDKLVIA+G+ T G GVKE+ FL+E + A IR K++ + P
Sbjct: 221 PKDIKISYDKLVIAVGSVPHTMGTKGVKEHCLFLKEANDALRIRTKVMDCFERASFPNQP 280
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSF 135
E RLLH VVGGGPTGVE +GEL DFI D+ + + + +TL++ A+ +L+++
Sbjct: 281 INEIKRLLHFTVVGGGPTGVESAGELYDFIHDDLVSTFPELVPHCQITLVQSADHLLNTY 340
Query: 136 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLIL---NDGT--EVPYGLLVWSTGVGPS 189
D ++ + Q +S ++ + G V +V+ L + ND E+P+G+ +W+TGVGP
Sbjct: 341 DAKIIEFTEKQFGRSNIQALYGSRVVEVNETTLKVMSKNDKKEYEIPFGMCIWATGVGPR 400
Query: 190 TLVKSL--DLPKSPGGR-IGIDEWLRVPSV--QDVFAVGDCS 226
TL + +P R I D +LRV V +V+A+GDCS
Sbjct: 401 TLTRKFCASVPDQKNQRAITTDAFLRVVGVPNPNVYAIGDCS 442
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMEL---GDPFVYRHLGSMATIGR 291
T LPA AQVA + G YL LN + K+ E+ PF Y+HLGS A IG
Sbjct: 526 TTLPATAQVANQMGAYLAKSLNV------DVIKNEKNDEIHLPASPFNYKHLGSFAYIGS 579
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ ++ ++ S G W +RS Y + S +N+ ++ +W + +FGRDISR
Sbjct: 580 HTSVAEI----PGVNFSGGGLGVWYAYRSIYWEKQFSLKNKVLLSFDWMKSIIFGRDISR 635
Query: 352 I 352
I
Sbjct: 636 I 636
>gi|325924313|ref|ZP_08185857.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas gardneri
ATCC 19865]
gi|325545178|gb|EGD16488.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas gardneri
ATCC 19865]
Length = 417
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 172/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 89 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 147
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 148 AWLSFAVVGGGPTGVELAGTLAEIARHTLKDEFRHIDPQQARVRLVEAGPRVLPSFPEDL 207
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 208 TDKARKQLERLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 266
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L VP ++F GD + ++ G+ V P +A A++ GK++ +
Sbjct: 267 LDRAGRVLVQPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKHIAKAIRAR 324
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ G+A A F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 325 HR---GQATPA--------FRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 367
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 368 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|402302518|ref|ZP_10821629.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp.
FOBRC9]
gi|400380336|gb|EJP33155.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp.
FOBRC9]
Length = 426
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 174/356 (48%), Gaps = 22/356 (6%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
E V E + L +I+YD LV+A GA + FG V +N+ ++ + A +R L+
Sbjct: 79 AEGVDQERKVLLTNHGEIAYDYLVLAAGATTNFFGNESVAQNSYPMKSLQEAIALRSHLV 138
Query: 65 LNL-MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--I 121
+ V ++E+ R L+ V+VGGG TG+E +G + + I DV ++ H D+ +
Sbjct: 139 HEFERAARVNETDDDERQRHLNFVIVGGGATGIELAGAIIELI--DVFKKEYHSLDFSRV 196
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
HV L+EA +L L+ L K GV + + V D D L L G +P
Sbjct: 197 HVILLEAMGSVLPMVPPDLQQKTIDVLRKKGVDVRLNTAVTDYDGSTLSLKGGDVIPTKT 256
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TV 236
++W+ GV +K GRI ++E L V VFA+GDC+ + T + TV
Sbjct: 257 VIWAAGVRAQDFIKDCGGEVDRAGRIIVEENLLVRGSDCVFAIGDCANFQHGTERPLPTV 316
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 296
P Q A + G+ + +L++ GK K ELG FVY+ LG+MATI R +A++
Sbjct: 317 APVATQEALQVGRNIMALIH--GK---------KPEELGR-FVYQDLGAMATIARGEAVM 364
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ + +GF++W W +L R+ F V + W ++ G+ ++RI
Sbjct: 365 NGPIPVIGINMKASGFIAWTAWMFVHLMRLAGKYANFTVMMKWIWNYILGKRLARI 420
>gi|262340970|ref|YP_003283825.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272307|gb|ACY40215.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 431
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 164/331 (49%), Gaps = 34/331 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD L++A G+ + FG ++ A ++ + A ++R L+L S + +EK
Sbjct: 101 LSYDYLIMATGSVTNYFGNKNIESFAFPMKSIPEALDLR-SLILQDFESALLTKDSKEKD 159
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN-EILS 133
RL+ V+VGGGPTGVE +G L++ +RY DY +++ L++A+ +L
Sbjct: 160 RLMTFVIVGGGPTGVELAGALAEM------KRYVLPNDYPDLDIESMNIHLLQASPRLLD 213
Query: 134 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
++ A L + GV + + +V+D D + + + ++ ++W+ GV ++
Sbjct: 214 GMSEKSAKQAYKNLKELGVIIWLNCLVQDYDGKIVFIEKNKKIESANVIWAAGV-KGAII 272
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
K G RI +D +L+ +++FA+GD + + P AQ A +QG YL
Sbjct: 273 KGFLKEDIKGHRILVDNYLKTIKYKNIFAIGDVAVVCMKSYPNGHPMTAQPAIQQGNYLA 332
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
NR+ D E PF+Y++LGSMATIGR KA+ D L GF
Sbjct: 333 KNFNRLS-----------DQENIKPFMYKNLGSMATIGRNKAVCDF------PFFKLKGF 375
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
L+W+VW +L +V +RNR NW +
Sbjct: 376 LAWIVWMFVHLVSLVGFRNRAIALTNWIIQY 406
>gi|326801915|ref|YP_004319734.1| NADH dehydrogenase (ubiquinone) [Sphingobacterium sp. 21]
gi|326552679|gb|ADZ81064.1| NADH dehydrogenase (ubiquinone) [Sphingobacterium sp. 21]
Length = 425
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 169/333 (50%), Gaps = 34/333 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LV+ALG E + FG+ VK ++ ++ + A +R +LLN M V +
Sbjct: 93 LSYDYLVLALGTETNYFGMESVKNDSLPMKTIDEALHLRNHILLN-MEKVVRMQDTARRD 151
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANEI-LSSFDDRL 139
LL+ VV GGGPTGVEF+G L++ + Y +KD+ H+ L+ + + L
Sbjct: 152 GLLNIVVAGGGPTGVEFAGMLAELGGYIAAKEYPEIKDFRSHIYLVNSGPVLLGPMSKTA 211
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+ A L+K GV ++ VKD + ++IL++G + L+W+TG V + ++P
Sbjct: 212 QQEAEKVLTKLGVNVILNAAVKDYLNGRVILSNGRTIETEALIWATG------VIAREVP 265
Query: 199 KSP------GGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 251
P G RI +D + +V ++FA+GD C + P LAQVA +QGK L
Sbjct: 266 GLPSQVITRGRRIIVDAFNKVVDTANIFAIGDICYQTTDPHFPEGHPQLAQVAIQQGKLL 325
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
L+R A G+ + F Y GSMA I +YKA+ DL + S G
Sbjct: 326 AKNLSR---AVSGQEQKS--------FHYNDKGSMAIISKYKAVADLPK------FSFKG 368
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
F +W++W ++ ++ +RN+ + +W +F+
Sbjct: 369 FFAWVLWLFIHIIPLIGFRNKMKLIFSWMWSFI 401
>gi|359683573|ref|ZP_09253574.1| NADH dehydrogenase [Leptospira santarosai str. 2000030832]
gi|421113002|ref|ZP_15573457.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. JET]
gi|422003522|ref|ZP_16350751.1| NADH dehydrogenase [Leptospira santarosai serovar Shermani str. LT
821]
gi|410801573|gb|EKS07736.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. JET]
gi|417257741|gb|EKT87137.1| NADH dehydrogenase [Leptospira santarosai serovar Shermani str. LT
821]
Length = 422
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 174/333 (52%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L++FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLTTFDVSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D+D + + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLESRGVEVLTGARVIDIDERGVQL-EGKMIPTQTVIWAAGVQANSIASTLGATL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRSGRVSVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + PF Y GSMATIGR A+ + L + G W W
Sbjct: 334 ---GDLKNKKR-----KPFRYVDKGSMATIGRTDAVAQMGV------LRMKGLFGWFAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|313895815|ref|ZP_07829369.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312975240|gb|EFR40701.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 426
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 174/356 (48%), Gaps = 22/356 (6%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
E V E + L +I+YD LV+A GA + FG V +N+ ++ + A +R L+
Sbjct: 79 AEGVDQERKVLLTNHGEIAYDYLVLAAGATTNFFGNESVAQNSYPMKSLQEAIALRSHLV 138
Query: 65 LNL-MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--I 121
+ V ++E+ R L+ V+VGGG TG+E +G + + I DV ++ H D+ +
Sbjct: 139 HEFERAARVNETDDDERQRHLNFVIVGGGATGIELAGAIIELI--DVFKKEYHSLDFSRV 196
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
HV L+EA +L L+ L K GV + + V D D L L G +P
Sbjct: 197 HVILLEAMGSVLPMVPPDLQQKTIDVLRKKGVDVRLNTAVTDYDGSTLSLKGGDVIPTKT 256
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TV 236
++W+ GV +K GRI ++E L V VFA+GDC+ + T + TV
Sbjct: 257 VIWAAGVRAQDFIKDCGGEVDRAGRIIVEENLLVRGSDCVFAIGDCANFQHGTERPLPTV 316
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 296
P Q A + G+ + +L++ GK K ELG FVY+ LG+MATI R +A++
Sbjct: 317 APVATQEALQVGRNIMALIH--GK---------KPEELGR-FVYQDLGAMATIARGEAVM 364
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ + +GF++W W +L R+ F V + W ++ G+ ++RI
Sbjct: 365 NGPIPVIGINMKASGFIAWTAWMFVHLMRLAGKYANFTVMMKWIWNYILGKRLARI 420
>gi|418751816|ref|ZP_13308088.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. MOR084]
gi|409967545|gb|EKO35370.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. MOR084]
Length = 422
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 174/333 (52%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L++FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLTTFDVSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D+D + + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLESRGVEVLTGARVIDIDERGVQL-EGKMIPTQTVIWAAGVQANSIASTLGATL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRSGRVSVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + PF Y GSMATIGR A+ + L + G W W
Sbjct: 334 ---GDLKNKKR-----KPFRYVDKGSMATIGRTDAVAQMGV------LRMKGLFGWFAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|418746409|ref|ZP_13302735.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. CBC379]
gi|410792684|gb|EKR90613.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. CBC379]
Length = 422
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 174/333 (52%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L++FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLTTFDVSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D+D + + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLESRGVEVLTGARVIDIDERGVQL-EGKMIPTQTVIWAAGVQANSIASTLGATL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRSGRVSVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + PF Y GSMATIGR A+ + L + G W W
Sbjct: 334 ---GDLKNKKR-----KPFRYVDKGSMATIGRTDAVAQMGV------LRMKGLFGWFAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|269837682|ref|YP_003319910.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Sphaerobacter thermophilus DSM 20745]
gi|269786945|gb|ACZ39088.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Sphaerobacter thermophilus DSM 20745]
Length = 451
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 171/333 (51%), Gaps = 21/333 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ALG++ + FG+H V+ A L+ + A IR +++ ++ + V EE+
Sbjct: 133 RIRYDYLVLALGSQTNYFGMHEVEREALGLKTIPAASSIRARIIDSVERAAVAS-DPEER 191
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
LL VVG G TGVE L D + ++ Y ++ + + LIEA + IL R
Sbjct: 192 RWLLTFAVVGAGATGVELVASLDDLLRNNLLPYYPSLRGEEPRIVLIEAMDTILPGTTPR 251
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+R A +L G+ + ++ V V + L+ G E+ L+W+ G+ P+ + SL +
Sbjct: 252 MRAIAERRLKDLGIDIRLKTAVAGVRNGALVTRAGDEIAAATLIWTAGIRPNPVAASLPV 311
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
KS GRI +DE+LR+PS +VFA+GD + + LPA A VA R+G + L R
Sbjct: 312 EKSRDGRIVVDEYLRIPSAPNVFALGDNAFVPDQNSGAPLPANASVAVREGAAVGRNLVR 371
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ + +E PFV+R G M +GR A + ++ G +WLV
Sbjct: 372 L--------LTGHPLE---PFVFRSPGEMIALGRGHAAATIGP------VAFGGLPAWLV 414
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
WR +L++++ R+R V ++W + R I+
Sbjct: 415 WRVFHLSQIMGVRSRVGVTLDWTAALLSRRYIA 447
>gi|326498653|dbj|BAK02312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 576
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 137/235 (58%), Gaps = 13/235 (5%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
K+HC + E +F + YD LV+A+GA ++TF GV EN FL+EV AQ+IRR
Sbjct: 137 KIHCRSNV-ETNLDGNGEFLVDYDYLVVAVGARSNTFNTPGVTENCHFLKEVEDAQKIRR 195
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P ++EEE+ + LH VVVGGGPTGVEF+ EL DF+ D+ + Y ++ +
Sbjct: 196 SVMDCFEKASLPYLNEEERKKNLHFVVVGGGPTGVEFAAELHDFVTEDLSKLYPSIQHLV 255
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEV 175
++LIE A+ IL+ FD R+ ++A + + G+ + G + KD + + V
Sbjct: 256 KISLIEAADHILTMFDKRITNFAEDKFGRDGIDVKTGYKVVKVSKDAITMQNPATGDIAV 315
Query: 176 PYGLLVWSTGVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
PYG+ VWSTG+G V +D K G + DEWLRV DV+AVGDC+
Sbjct: 316 PYGMAVWSTGIGTRPFV--VDFMKQIGQANRRVLATDEWLRVRECDDVYAVGDCA 368
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL + N++ A + G +PF YRHLG A +G
Sbjct: 462 LPATAQVAAQQGQYLATCFNKMQAAEENPEGPIRIRGEGRHRFNPFRYRHLGQFAPLGGE 521
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y T+ +SWR R V +W F+FGRD S I
Sbjct: 522 QTAAQLPGDWVSIGHSS----QWL-WYSVYATKQISWRTRALVISDWGRRFIFGRDSSGI 576
>gi|163787956|ref|ZP_02182402.1| putative NADH dehydrogenase [Flavobacteriales bacterium ALC-1]
gi|159876276|gb|EDP70334.1| putative NADH dehydrogenase [Flavobacteriales bacterium ALC-1]
Length = 423
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 160/327 (48%), Gaps = 22/327 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LVIA G + + FG +K N+ ++ V A IR +L N + + S++E+
Sbjct: 100 IPYDYLVIATGTKTNYFGNKSIKTNSMPMKTVPQALNIRSLILQNFEKAAIAD-SKKERE 158
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFDDRL 139
L+ V+VG GPTGVE +G +++ + + Y + +H+ L+E A+ +L
Sbjct: 159 AFLNFVIVGAGPTGVELAGAIAELKNNILPRDYRDLNPSDMHIHLLEGADRVLPPMSLHA 218
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDL 197
+ L GV++ VKD D + N + L+W+ GV G + D+
Sbjct: 219 SKKSAKFLKALGVKVHCNTFVKDYDGLTVTTNSDLVMQSETLIWAAGVTGAPVGGLTADI 278
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
+ R ++ + ++ D+FA+GD + + +T P +AQ A +QGK L L R
Sbjct: 279 LQGNANRYHVNAYNQIEGYDDIFAIGDIALMISNTYPKGHPQVAQPAIQQGKLLGKNLLR 338
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ D + PFVYR GSMATIGR KA+VDL++ K GF +W +
Sbjct: 339 L-----------IDNKPLKPFVYRDKGSMATIGRNKAVVDLKRYK------FGGFFAWFI 381
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFV 344
W +L +V +RNR V NW ++
Sbjct: 382 WMFVHLMSLVGFRNRIIVLFNWTYNYI 408
>gi|410448284|ref|ZP_11302367.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira sp.
Fiocruz LV3954]
gi|410017878|gb|EKO79927.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira sp.
Fiocruz LV3954]
gi|456875729|gb|EMF90924.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. ST188]
Length = 422
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 174/333 (52%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA +S FG ++ L+ + A +IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGARSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L++FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLTTFDVSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D+D + + L +G +P ++W+ GV +++ +L
Sbjct: 219 EFTKKRLESRGVEVLTGARVIDIDERGVQL-EGKMIPTQTVIWAAGVQANSIASTLGATL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRSGRVSVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + PF Y GSMATIGR A+ + L + G W W
Sbjct: 334 ---GDLKNKKR-----KPFRYVDKGSMATIGRTDAVAQMGV------LRMKGLFGWFAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|338975728|ref|ZP_08631077.1| NADH dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
gi|338231037|gb|EGP06178.1| NADH dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
Length = 426
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 174/333 (52%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ +D L++A GA + FG + A L+ + A +IRR++L ++ SE E++
Sbjct: 99 VLFDTLILATGARHAYFGHDEWEPYAPGLKTLEDATKIRRRILSAFEQAEW-ATSEAERA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
RLL V++G GPTGVE +G +++ +R + + V LIEA ILS F + L
Sbjct: 158 RLLTFVIIGAGPTGVELAGTIAELAHDTLRGEFRNFDTRKARVILIEAGPRILSGFTEDL 217
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L++ GV + G S++ + G +P ++W+ GV S + L P
Sbjct: 218 SDYAQRALTRLGVEIRLGHAVSRCSEEGVELGGEFLPASTIIWAAGVAASPAAEWLHAPA 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ + L VP D+F +GD + ++EST ++P +A A+++G+Y +
Sbjct: 278 DRAGRVMVMPDLTVPGHPDIFVIGDAA-HVESTDGKLVPGVAPAAKQEGQY-------VA 329
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+A R K G+ FVY++ G++ATIG+ A+VD K L G L+W +W
Sbjct: 330 RAIQARLRGEK---FGNNFVYKNAGNLATIGKRAAIVDFGWIK------LKGRLAWWIWG 380
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ RNR VA+NW +V G+ +R+
Sbjct: 381 IAHIFFLIGLRNRLAVAMNWLWIYVRGQRSARL 413
>gi|375149381|ref|YP_005011822.1| NADH dehydrogenase (ubiquinone) [Niastella koreensis GR20-10]
gi|361063427|gb|AEW02419.1| NADH dehydrogenase (ubiquinone) [Niastella koreensis GR20-10]
Length = 424
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 175/349 (50%), Gaps = 38/349 (10%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
V E T+E + YD LV+A+G E++ FG+ VK ++ ++ + A +R LLL
Sbjct: 84 VNPEQNTIETDTGMVDYDYLVLAMGTESNYFGMERVKAHSLPMKSIDDALNLRNHLLL-N 142
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLI 126
M V +EK + L+ V+ GGGPTGVE +G L++ + Y +KD H+ LI
Sbjct: 143 MEEAVHTDDFKEKEKHLNIVICGGGPTGVELAGMLAELGRNIALKEYPEIKDLRSHLYLI 202
Query: 127 EANE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWST 184
+A + +L ++ + AT L K GV ++ VKD + L+DG +P +L+W++
Sbjct: 203 DAGKALLGPMSEKSQQEATRVLKKLGVHVINNTAVKDYQDDIVYLSDGRTIPTKVLIWAS 262
Query: 185 GVGPSTLVKSLDLPKSPGGRIG------IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL- 237
G V ++P P IG +DE+ +V Q++F VGD L++T K
Sbjct: 263 G------VIGREVPGLPAAVIGRGRRVLVDEFNKVQGSQNIFVVGDLC--LQTTDKNFPN 314
Query: 238 --PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
P LAQVA +QG L L R+ D PF Y GSMA I ++KA+
Sbjct: 315 GHPQLAQVAIQQGTLLGKNLTRL-----------LDNNPMKPFAYNDKGSMAIISKFKAV 363
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
DL + GF +WLVW ++ ++ +RN+ +A +W +F+
Sbjct: 364 CDLPK------FFFKGFGAWLVWLFIHIIPLIGFRNKVKLAFSWGWSFI 406
>gi|365763642|gb|EHN05168.1| Ndi1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 471
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 193/363 (53%), Gaps = 33/363 (9%)
Query: 12 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 71
L EP + I YD L+ A+GAE +TF I G + FL+E+ ++ EIRR NL ++
Sbjct: 117 LHQAEPAE--IKYDYLISAVGAEPNTFXIPGXTDYGHFLKEIPNSLEIRRTFAANLEKAN 174
Query: 72 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 131
+ + E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + L+EA I
Sbjct: 175 LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAXEVQIHLVEALPI 234
Query: 132 -LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLV 181
L+ F+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+
Sbjct: 235 VLNMFEKKLSAYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLI 294
Query: 182 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
W+TG ++ L +P+ + G ++++L+V ++FA+GD + L
Sbjct: 295 WATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGL 347
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGG--GRANSAKD-----MELGD--PFVYRHLGSMAT 288
P AQVA ++ +YL +++ + + +S KD E + PF Y LG++A
Sbjct: 348 PPTAQVAHQEAEYLAKNFDKMAQIPNFQKKISSRKDKIDLLFEENNFKPFKYNDLGALAY 407
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
+G +A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 408 LGSERAIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 466
Query: 349 ISR 351
+
Sbjct: 467 FFK 469
>gi|378826504|ref|YP_005189236.1| putative NADH dehydrogenase [Sinorhizobium fredii HH103]
gi|365179556|emb|CCE96411.1| putative NADH dehydrogenase [Sinorhizobium fredii HH103]
Length = 422
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 166/337 (49%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA + FG A L+ + A IRR++LL ++ SEE+ +
Sbjct: 97 VPYDTLVLATGATHAYFGHDEWAHVAPGLKTLEDATTIRRRVLLAFEQAE----SEEDPA 152
Query: 82 R---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 136
R LL ++G GPTGVE +G +++ R + + + V L+EA IL +F
Sbjct: 153 RRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPDEFRRIDTRQARVILVEAGARILPTFA 212
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L YA +L+K GV + G V D + + + D + VP LVW+ GV S K L
Sbjct: 213 EELSAYAMAELAKLGVEVRTGTPVTDCTADGVRIGD-SFVPSCTLVWAAGVQASPAAKWL 271
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GR +D+ L P F +GD + + G V P +A A++QG Y+ ++
Sbjct: 272 GIEADRAGRAMVDQDLTAPGNPSAFVIGDTALVKQENGAPV-PGIAPAAKQQGAYVARVI 330
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
K PF YRH GS+ATIG+ A++D + K L G L+W
Sbjct: 331 R----------ARLKGQPAPGPFRYRHQGSLATIGKRAAIIDFGRIK------LKGGLAW 374
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 WIWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 411
>gi|357058792|ref|ZP_09119638.1| hypothetical protein HMPREF9334_01355 [Selenomonas infelix ATCC
43532]
gi|355373138|gb|EHG20459.1| hypothetical protein HMPREF9334_01355 [Selenomonas infelix ATCC
43532]
Length = 428
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 166/342 (48%), Gaps = 24/342 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ISYD LV+A GA + FG V+ N+ ++ + A +R ++ + EE +
Sbjct: 95 EISYDYLVLAAGATTNFFGNKSVERNSYAMKTLQEAIALRGHIIHEFERAARKSAPEERE 154
Query: 81 SRLLHC--VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSSF 135
+R H V+VGGG TG+E +G L + I ++ ++ H D+ + VTL+EA +L
Sbjct: 155 ARRRHLNFVIVGGGATGIEMAGALMELI--EIFKKEFHTIDFSEVSVTLLEAMGSVLPMV 212
Query: 136 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
L+ + L K GV + + V + D L LN+G +P ++W+ GV +K
Sbjct: 213 PPDLQQHTIDVLRKKGVDVRLNTAVTEYDGNDLTLNNGEVIPTKTVIWAAGVRAQDFIKD 272
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG----KY 250
GR+ ++E L V VFA+GDC+ + + LP +A VA ++ K
Sbjct: 273 CGGEVDRAGRVIVEENLLVKGSDRVFAIGDCANFQHGDLQRPLPTVAPVATQEAMQVKKN 332
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ +L+ + K + + FVY LG+MATIG+ +A+++ L +
Sbjct: 333 IMALI------------AGKTPDQLEKFVYHDLGAMATIGKGEAVMNGPMPVLGFNLKAS 380
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
GF +W W +L R+ F V+V W F FG ++RI
Sbjct: 381 GFFAWFAWMLVHLVRLAGKYADFTVSVKWIWNFFFGTRLARI 422
>gi|21244546|ref|NP_644128.1| NADH dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
gi|21110220|gb|AAM38664.1| NADH dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
Length = 430
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 102 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 161 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDL 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 221 TAKARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 280 LDRAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 330
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 331 AKAIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 381 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|256424048|ref|YP_003124701.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chitinophaga pinensis DSM 2588]
gi|256038956|gb|ACU62500.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chitinophaga pinensis DSM 2588]
Length = 448
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 33/338 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE-- 78
++ YD LV A G E + FG +K+ A ++ V+ A E+R +LL L ++ I+++
Sbjct: 102 ELQYDYLVFATGTETNYFGNDNIKKRAIPMKTVNDALEMRNRLLKRL---EIASITKDPI 158
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFD 136
E+ +L V+ GGGPTGVE SG L++ +R+ Y ++ + L+ E +L
Sbjct: 159 ERKKLTTIVIAGGGPTGVEVSGMLAELRKYVIRKDYPELEGQGGEIYLVNGGESLLEPMS 218
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ + + L + GV++ ++ VKD ++ILN+G + L+W+ GV + L + +
Sbjct: 219 PKSQKHTYNALRRLGVKIKLKTRVKDFVDDQVILNNGDTIHTSTLIWAAGVT-AYLHEGI 277
Query: 196 DLPKS-PGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL-- 251
+ + PG R+ D + RV V D++A+GD C +S P LAQVA +QG+ L
Sbjct: 278 PIASTGPGRRMMTDAFNRVIGVDDIYAIGDTCLTKTDSNFPEGHPQLAQVALQQGRNLAK 337
Query: 252 -FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
FSL+ D + PF Y G+MA IGR A+ D+ S L
Sbjct: 338 NFSLM--------------VDNKQLKPFSYVDKGTMAIIGRNNAVADI----PSPKLHFN 379
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
GF++W +W ++ ++++RNR NW + F RD
Sbjct: 380 GFIAWAMWLFVHVMALINYRNRLKTMYNWTVAY-FTRD 416
>gi|320450839|ref|YP_004202935.1| NADH dehydrogenase [Thermus scotoductus SA-01]
gi|320151008|gb|ADW22386.1| NADH dehydrogenase [Thermus scotoductus SA-01]
Length = 395
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 169/338 (50%), Gaps = 47/338 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ Y LV+A G+ S G+ GV+E+A FL+ + A +R +LL L +
Sbjct: 95 LPYRFLVVATGSLPSDLGVPGVREHALFLKTLGQALRVRYRLLEALE-------KAARRG 147
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-----VTLIEAN-EILSSF 135
R L +VVGGGPTGVE +G LS+F+ RY+ +D+ VTL+EA +L +F
Sbjct: 148 RPLDLLVVGGGPTGVELAGALSEFL------RYALPRDFPEVPAGAVTLLEAGPRLLPAF 201
Query: 136 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
L YA L++ GVR+ G V +V + L+ G + L++W+ GV + L
Sbjct: 202 RPALGRYAEGALAQLGVRVRLGAQVAEVGEGWVRLSGGERLKGDLVLWAVGVRGNPLP-- 259
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
LP GR+ D LR+ +V+ VGD +G P LA VA +QG++
Sbjct: 260 -GLPADARGRVPTDPCLRLVGYPEVYVVGDLNG-------LGFPQLAPVALQQGRWAARN 311
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
L RA +D PF YR G +A IGR +A+ +L GL +AG +
Sbjct: 312 LL--------RALREQDPL---PFRYRDRGQLAVIGRNRAVAEL------WGLGVAGLPA 354
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
WL+W +L +V +RNR V ++WA T++F RI
Sbjct: 355 WLLWAFVHLRELVGFRNRLLVFLDWAYTYLFREPGVRI 392
>gi|386810965|ref|ZP_10098191.1| pyridine nucleotide-disulphide oxidoreductase [planctomycete KSU-1]
gi|386405689|dbj|GAB61072.1| pyridine nucleotide-disulphide oxidoreductase [planctomycete KSU-1]
Length = 416
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 185/337 (54%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL-MLSDVPGISEEEK 80
I+YD L++A G+ + FG+ +K L+ ++ A +R ++L + + P SE +
Sbjct: 93 IAYDYLILATGSVTNFFGMDTMKRYGYDLKYLNDAVVLRNQILSSFEYAAQKPNASE--R 150
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS--HVKDYIHVTLIEA-NEILSSFDD 137
LL VVVGGGPTGVEF+G L++ + + + Y VKD I + LIEA + +LS+F
Sbjct: 151 LALLTFVVVGGGPTGVEFTGALAELVHHVLSKDYPELQVKD-IRIILIEAGDSLLSNFPK 209
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+L+ YA +L + G+ + ++ V +S +++L DGT +P L W+ GV S+L +L
Sbjct: 210 KLQDYALFKLHRMGIEVRLKTAVSGAESHQVLLKDGTSIPSRTLFWAAGVRASSLADALP 269
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ K GGRI + + L + +VF +GD + YLE + LP +A VA +QG+Y
Sbjct: 270 VMKVRGGRIIVKQDLTIEGYPNVFVIGDMA-YLEQD-RQPLPMIAPVAMQQGEY------ 321
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
AG + +G PF YR GSMATIGR A+ + G S +GF +W+
Sbjct: 322 ----AGRAILQGERGRPIG-PFYYRDRGSMATIGRGAAVA------HTMGFSFSGFSAWV 370
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
+W + +L ++ +RNR V +NW F+ R I I
Sbjct: 371 IWLALHLFFLIGFRNRIVVLLNWGYEYFLLKRQIRII 407
>gi|52840908|ref|YP_094707.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52628019|gb|AAU26760.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 738
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 163/330 (49%), Gaps = 33/330 (10%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
F I YD LVIA GA S FG A L+ ++ +R +++ + L+++ S+E
Sbjct: 403 NFTIPYDYLVIATGATHSYFGKDSWAPYAPGLKTINDGTSVRSRIIKSFELAEIAE-SDE 461
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN--------E 130
E+ + L+ V+VG GPTGVE +G +++ R+ VK++ H AN
Sbjct: 462 ERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPASANIILVQAAPR 515
Query: 131 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189
IL +F +++ A L GV+ LV +V+ +DS +I+N + + W+ GV S
Sbjct: 516 ILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSKSVFWAAGVAAS 574
Query: 190 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
K L L P GR+ +++ L V ++FA+GD + GK V P +A A++ G
Sbjct: 575 PASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-PGIAPAAKQGGA 633
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
Y+ ++++ R PF Y H GS+AT+GR A+ + + K +
Sbjct: 634 YVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEFDRFK------I 678
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+G L+W W ++ +V RNR V +NW
Sbjct: 679 SGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|209550085|ref|YP_002282002.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535841|gb|ACI55776.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 421
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 174/340 (51%), Gaps = 30/340 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL----MLSDVPGI 75
+ YD LV+A GA + FG + A L+ + A IRR++LL M SD P +
Sbjct: 94 MTLGYDTLVLATGATHAYFGRDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMESD-PAV 152
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 133
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L
Sbjct: 153 ----RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLP 208
Query: 134 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
+F + L YA T L K GV + G V D + + + + T V +VW+ GV S
Sbjct: 209 TFAEELSAYAQTALEKLGVEIHLGRPVTDCSADGVKIGE-TFVASRTIVWAAGVTASPAA 267
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
L++P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+
Sbjct: 268 HWLNVPADRAGRVVVEKDLSAPGLPDVFVIGDTALVMREDGKPV-PGIAPAAKQQGGYVA 326
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
++ + G A + PF YRH GS+ATIG+ A++D + K L G+
Sbjct: 327 KVIR--ARLSGKSAPA--------PFRYRHQGSLATIGQSAAIIDFGRIK------LKGW 370
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L+W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 371 LAWWIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|223935272|ref|ZP_03627190.1| cyclic nucleotide-regulated FAD-dependent pyridine
nucleotide-disulphide oxidoreductase [bacterium
Ellin514]
gi|223896156|gb|EEF62599.1| cyclic nucleotide-regulated FAD-dependent pyridine
nucleotide-disulphide oxidoreductase [bacterium
Ellin514]
Length = 535
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 181/365 (49%), Gaps = 35/365 (9%)
Query: 2 KVHCETVTDELRTLEPWKFKISY------------DKLVIALGAEASTFGIHGVKENATF 49
+V C T +E++ ++P + +I Y D LV+A G+ A+ + G+ ++A
Sbjct: 71 RVFCRT--EEVQNIDPPRNEIEYLAEDCQPGRMRYDHLVVACGSMANLHVVPGMADHAFP 128
Query: 50 LREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD 109
L+ V A +R ++ + ++V E + L +VVGGG +GVE +GE++D +
Sbjct: 129 LKNVGDAITLRSHIMEEMEKAEVCADPERRRWHLTF-IVVGGGYSGVEVAGEINDLVRSS 187
Query: 110 VRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKL 167
R + + V LI + ++IL RLR + ++ + GV+ ++ VK + +
Sbjct: 188 TRYFQNVRAQDVKVILIHSRHQILPEIGSRLREFTRRKMEQRGVKVMLDTCVKLASPEGV 247
Query: 168 ILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 227
+L DG + G +V + G P+++V++L K GR+ +R+ +V+AVGDC+
Sbjct: 248 VLKDGEFLKGGTIVCTIGNSPTSIVEALTTAKE-NGRLATRPDMRLRDWSNVWAVGDCAQ 306
Query: 228 YLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMA 287
+ P Q AERQG + R+ N+ + PF ++ LG +
Sbjct: 307 IINGHDGRPSPPTGQFAERQGTQCAHNIIRV-------LNNRET----KPFSFKPLGELC 355
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
+IG + A+ ++ G LAGF +W VWR YL ++ +W RF V ++W +F R
Sbjct: 356 SIGGHSAVAEI------FGHDLAGFAAWFVWRGVYLFKLPTWARRFQVGLDWFLLLLFPR 409
Query: 348 DISRI 352
D+S +
Sbjct: 410 DLSHL 414
>gi|456862519|gb|EMF81062.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira weilii
serovar Topaz str. LT2116]
Length = 423
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 175/333 (52%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D++ Q + L +G +P ++W+ GV + + +L +
Sbjct: 219 EFTKKRLESRGVEVLTGTRVIDINEQGVQL-EGKMIPTETVIWAAGVQANGIASTLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ V +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRGGRVIVDEFCNVEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + F Y GSMATIGR A+ + L + G WL W
Sbjct: 334 ---GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQVGV------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|54296696|ref|YP_123065.1| hypothetical protein lpp0727 [Legionella pneumophila str. Paris]
gi|397663239|ref|YP_006504777.1| putative NADH dehydrogenase [Legionella pneumophila subsp.
pneumophila]
gi|53750481|emb|CAH11875.1| hypothetical protein lpp0727 [Legionella pneumophila str. Paris]
gi|395126650|emb|CCD04833.1| putative NADH dehydrogenase [Legionella pneumophila subsp.
pneumophila]
Length = 738
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 167/341 (48%), Gaps = 33/341 (9%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
+ E R + F I YD LVIA GA S FG A L+ ++ +R +++ +
Sbjct: 392 INKEERLVIADNFTIPYDYLVIATGATHSYFGKDSWAPYAPGLKTINDGTSVRSRIIKSF 451
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 127
L+++ S+EE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H
Sbjct: 452 ELAEIAE-SDEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPAS 504
Query: 128 AN--------EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYG 178
AN IL +F +++ A L GV+ LV +V+ +DS +I+N +
Sbjct: 505 ANIILVQAAPRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSK 563
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+ W+ GV S K L L P GR+ +++ L V ++FA+GD + GK V P
Sbjct: 564 SVFWAAGVAASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-P 622
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+A A++ G Y+ ++++ R PF Y H GS+AT+GR A+ +
Sbjct: 623 GIAPAAKQGGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEF 673
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ K ++G L+W W ++ +V RNR V +NW
Sbjct: 674 DRFK------ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|148360676|ref|YP_001251883.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
str. Corby]
gi|296106259|ref|YP_003617959.1| NADH dehydrogenase, FAD-containing subunit [Legionella pneumophila
2300/99 Alcoy]
gi|148282449|gb|ABQ56537.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
str. Corby]
gi|295648160|gb|ADG24007.1| NADH dehydrogenase, FAD-containing subunit [Legionella pneumophila
2300/99 Alcoy]
Length = 738
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 167/341 (48%), Gaps = 33/341 (9%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
+ E R + F I YD LVIA GA S FG A L+ ++ +R +++ +
Sbjct: 392 INKEERLVIADNFTIPYDYLVIATGATHSYFGKDSWAPYAPGLKTINDGTSVRSRIIKSF 451
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 127
L+++ S+EE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H
Sbjct: 452 ELAEIAE-SDEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPAS 504
Query: 128 AN--------EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYG 178
AN IL +F +++ A L GV+ LV +V+ +DS +I+N +
Sbjct: 505 ANIILVQAAPRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSK 563
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+ W+ GV S K L L P GR+ +++ L V ++FA+GD + GK V P
Sbjct: 564 SVFWAAGVAASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-P 622
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+A A++ G Y+ ++++ R PF Y H GS+AT+GR A+ +
Sbjct: 623 GIAPAAKQGGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEF 673
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ K ++G L+W W ++ +V RNR V +NW
Sbjct: 674 DRFK------ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|309792243|ref|ZP_07686715.1| AD-dependent pyridine nucleotide-disulfide oxidoreductase
[Oscillochloris trichoides DG-6]
gi|308225784|gb|EFO79540.1| AD-dependent pyridine nucleotide-disulfide oxidoreductase
[Oscillochloris trichoides DG6]
Length = 452
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 182/345 (52%), Gaps = 42/345 (12%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE-- 79
+ YD L+IA G+ + FG + E+ L+++ A+ +R +L N + +SE++
Sbjct: 123 LPYDYLIIAAGSANNYFGNDSLAEHTYGLKDLDDAERLRNHVLSNFEYA----VSEQDPA 178
Query: 80 -KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEANE- 130
+ RL+ V+VGGGPTGVE +G + + R+ V+DY V L+EA+E
Sbjct: 179 IRQRLMTLVIVGGGPTGVELAGAFIELV------RHVLVRDYPMLDISEARVVLVEASEH 232
Query: 131 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189
IL+ F + LR +L K GV + ++ +V +VD+Q + DG+ + G ++W+ GV +
Sbjct: 233 ILAVFPEGLRRSGLRRLEKMGVEVRLKTMVANVDAQGVTFGDGSRLETGSVIWAAGVRGA 292
Query: 190 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-LPALAQVAERQG 248
L SL + + GGR+ + L + + DVF +GD + YL++ V P +A VA +
Sbjct: 293 HLGDSLGMKLARGGRVPVQPTLNLATNPDVFVIGDMA-YLDTYKPGVPYPMIAPVAVQMA 351
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+ + N + K R + F Y G+MATIGR A++D + G+
Sbjct: 352 E--LAAHNILAKT---RRRPLRS------FHYFDKGNMATIGRRGAVMD------AFGVR 394
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
L+GFL+W+ W +L +V +RNR V +NWA + F + R + I
Sbjct: 395 LSGFLAWMGWLLVHLMFLVGFRNRVIVLLNWAYSYFTYDRGVRLI 439
>gi|397666349|ref|YP_006507886.1| putative NADH dehydrogenase [Legionella pneumophila subsp.
pneumophila]
gi|395129760|emb|CCD07993.1| putative NADH dehydrogenase [Legionella pneumophila subsp.
pneumophila]
Length = 738
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 167/341 (48%), Gaps = 33/341 (9%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
+ E R + F I YD LVIA GA S FG A L+ ++ +R +++ +
Sbjct: 392 INKEERLVIADNFTIPYDYLVIATGATHSYFGKDSWAPYAPGLKTINDGTSVRSRIIKSF 451
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 127
L+++ S+EE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H
Sbjct: 452 ELAEIAE-SDEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPAS 504
Query: 128 AN--------EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYG 178
AN IL +F +++ A L GV+ LV +V+ +DS +I+N +
Sbjct: 505 ANIILVQAAPRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSK 563
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+ W+ GV S K L L P GR+ +++ L V ++FA+GD + GK V P
Sbjct: 564 SVFWAAGVAASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-P 622
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+A A++ G Y+ ++++ R PF Y H GS+AT+GR A+ +
Sbjct: 623 GIAPAAKQGGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEF 673
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ K ++G L+W W ++ +V RNR V +NW
Sbjct: 674 DRFK------ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|86141293|ref|ZP_01059839.1| putative NADH dehydrogenase [Leeuwenhoekiella blandensis MED217]
gi|85831852|gb|EAQ50307.1| putative NADH dehydrogenase [Leeuwenhoekiella blandensis MED217]
Length = 422
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 169/332 (50%), Gaps = 28/332 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGIS--EE 78
+++YD LV+A G + + FG+ ++++A ++ + A ++R NL+L + + ++
Sbjct: 94 ELTYDYLVLATGTQTNYFGLDQIEKHAIPMKTLEDALDMR-----NLLLQRLEQATRIDD 148
Query: 79 EKSRL--LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEAN-EILSS 134
RL L+ V+ GGGPTGVE SG ++ +R+ + + + LI E+LS
Sbjct: 149 TSQRLPYLNMVIAGGGPTGVEISGVFAELRNHTIRKEFPELIGSGSRIYLINGGGELLSP 208
Query: 135 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
++ + Y QL GV L+ V D D +K+++ DG+ + L+W+TGV
Sbjct: 209 MSEKSQKYTLEQLQSMGVEVLLNTRVVDFDGEKVLMKDGSHIYSKNLIWATGVTGFRFKG 268
Query: 194 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS-GYLESTGKTVLPALAQVAERQGKYLF 252
D G R+ +DE R+ +++V+A+GD S + T P LAQVA +QG+ L
Sbjct: 269 IPDTSYVRGNRLKVDEVNRIEGLKNVYAIGDSSLSVSDPKFPTGHPQLAQVAMQQGRVLA 328
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
R+ K+ L PF Y GSMA IG KA+ D+ + K + GF
Sbjct: 329 KNFKRM----------VKNKPL-KPFTYLDKGSMAIIGSNKAVADMPKPK----MHFKGF 373
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
++W +W +L ++ +RNR NW+T ++
Sbjct: 374 MAWFIWLFVHLFALIDYRNRVRTFYNWSTEYL 405
>gi|347731654|ref|ZP_08864746.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Desulfovibrio sp. A2]
gi|347519604|gb|EGY26757.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Desulfovibrio sp. A2]
Length = 464
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 171/330 (51%), Gaps = 30/330 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L++A G+ S FG+ G ENA L+ + A +R +L + ++E+
Sbjct: 109 IPYDHLILAPGSLTSFFGVPGAAENAYTLKSLEDAVRLRNHILACFERAS---LTEDPAR 165
Query: 82 R--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANE-ILSSFD 136
R LL VVGGGPTGVEF+G L++ + + + + + K + L+EA + +L+ F
Sbjct: 166 RAALLTFTVVGGGPTGVEFAGALAELVRTPLARDFPELAGKTPARIVLLEAADGLLTGFP 225
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
++LR YA +L+ GV + + V +V + L DG + + W+ GV + ++
Sbjct: 226 EQLRTYARDRLALMGVEVRTKAGVAEVGPTDVRLGDGMRIATCTVAWTAGVRGHDVAAAM 285
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
LP GGR+ + L+V ++ VGD S G+ P +A A +QG++ S +
Sbjct: 286 GLPVGRGGRVPVLPTLQVDGHPEIHVVGDLS---LPEGQNP-PMIAPNATQQGRHAASNV 341
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R+ + GG+A F YR G+MATIGR A+V L + + +G +W
Sbjct: 342 LRLLQ--GGKAKV---------FRYRDKGAMATIGRQAAVVRLGR------FAFSGLWAW 384
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
++W +L ++ +RNR +V VNWA ++F
Sbjct: 385 VLWLFVHLAYLIGFRNRLFVLVNWAWDYLF 414
>gi|398341752|ref|ZP_10526455.1| NADH dehydrogenase [Leptospira inadai serovar Lyme str. 10]
Length = 434
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 178/332 (53%), Gaps = 23/332 (6%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A GA S FG K+ T L+ + A EIR KLLL+ +++ E KS L
Sbjct: 103 YDFLILAAGARTSYFGNDHWKKYTTGLKSLKDALEIRTKLLLSFERAELEEDKEIAKS-L 161
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLRH 141
L+ V++GGGPTGVE +G +++ VR + + + +TLIEA+ +L +F L
Sbjct: 162 LNYVIIGGGPTGVELAGSIAELSHEIVRNEFHTIDPALSKITLIEASPRLLMAFHPNLSG 221
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 200
+A +L K GV ++ G V ++D + + L +G + ++W+ GV + + ++L +P
Sbjct: 222 FAKNRLEKRGVEVLVGTKVINIDEEGVHL-EGRTIRCSNIIWAAGVQANAISQALGVPLD 280
Query: 201 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260
GR+ +DE+ + +VF +GD + + +++ + LP ++ VA +QG+Y+ SL+ +G
Sbjct: 281 RTGRVIVDEFCNIEGHPEVFVIGDIANFTKNSERP-LPGVSPVAMQQGRYVASLI--LGD 337
Query: 261 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 320
G + ++ F Y GSMATIGR A+ + + + GF W W
Sbjct: 338 LKGKKRSA---------FKYVDKGSMATIGRQDAVAQVGPWR------MKGFFGWAAWLF 382
Query: 321 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 383 VHLFYQVGFKNKVSILITWFWSYLTFRAEARL 414
>gi|399022254|ref|ZP_10724332.1| NADH dehydrogenase, FAD-containing subunit [Chryseobacterium sp.
CF314]
gi|398085197|gb|EJL75859.1| NADH dehydrogenase, FAD-containing subunit [Chryseobacterium sp.
CF314]
Length = 422
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 178/349 (51%), Gaps = 38/349 (10%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
V E +T+E + YD LV+ALG E++ FG+ V+ A ++ + A +R +LLNL
Sbjct: 81 VIPESKTIETDTGNLGYDDLVLALGTESNFFGMENVQRYALPMKNIEEALYLRNHILLNL 140
Query: 68 MLSDVPGISEEEKS--RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVT 124
+ +++ K+ +L + V+ GGGPTGVE +G L++ + Y +K + ++
Sbjct: 141 ---EEAARNKDIKTAQKLQNVVIAGGGPTGVELAGMLAEMGRYIAEKEYPEIKLALSNLY 197
Query: 125 LIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVW 182
LI+A +LS + + A L K GV+++ + VKD K+IL+DG + L+W
Sbjct: 198 LIDALPTLLSPMSKKAQETACQTLKKLGVKIILNVSVKDYVDGKVILSDGKRIETETLIW 257
Query: 183 STGVGPSTLVKSLDLPKSPGGRIG------IDEWLRVPSVQDVFAVGD-CSGYLESTGKT 235
++G V ++P P R+G ++ + +V + +++ +GD C E
Sbjct: 258 TSG------VIGREVPGIPEDRVGHGRRILVNAYNQVEGINNIYVLGDLCLQLTEDPYPK 311
Query: 236 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
P LAQVA +QGK L RI +D ++ PF Y GSMA I ++ A+
Sbjct: 312 GHPQLAQVAIQQGKNLGRNFKRI-----------EDEKVLVPFEYNDKGSMAIISKFNAV 360
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
VDL + S GF++WL W ++ +V + N+ +A++W F+
Sbjct: 361 VDLPK------FSFEGFIAWLTWLFIHIIPLVGFGNKIRLAMDWFRLFI 403
>gi|84625705|ref|YP_453077.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84369645|dbj|BAE70803.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 430
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 170/334 (50%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 102 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 161 AWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPEDL 220
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL + GV + V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 221 TDKARKQLQRLGVEVHTSAPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 280 LDRAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 330
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 331 AKAIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 381 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|410865081|ref|YP_006979692.1| Pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acidipropionici ATCC 4875]
gi|410821722|gb|AFV88337.1| Pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acidipropionici ATCC 4875]
Length = 449
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 162/335 (48%), Gaps = 30/335 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD +V+A G A+ FGI G E + + + R + +L D +K+
Sbjct: 112 IPYDYVVLAQGVGANFFGIPGAAERSDTIYTRASSLRARDVIFSHLEALDT------DKT 165
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
R ++VGGGPTGVE +G L++ + + V D +HVTL+E +L+ FD L
Sbjct: 166 RSFDVIIVGGGPTGVETAGTLAEMKSVGIPAIFPDVSIDRVHVTLVEMGPHLLAPFDAGL 225
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL + GV + +K++ ++L DG +P +++W+ GVG
Sbjct: 226 RHYTRKQLQRRGVDVRTETAIKEIREDSVLLGDGQTLPADMVIWAAGVGAHKKAVGWGFE 285
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GGRI D+ LRV +FAVGD + E+ LP LAQ A ++G+ + S + +
Sbjct: 286 TGRGGRIVTDKNLRVHGQDRIFAVGDGAIIDENP----LPQLAQPAIQEGELVASQVVHL 341
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ E F Y G+MATIGR A+V+L + G GF +WLVW
Sbjct: 342 ERG-----------EALQEFSYVDKGTMATIGRNAAVVEL-----ANGPKFTGFPAWLVW 385
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
++ ++ RNR VN + ++ F R+ I
Sbjct: 386 VMIHIYSLLGGRNRIQAMVNLGSRYLTFNREAGAI 420
>gi|373110316|ref|ZP_09524585.1| hypothetical protein HMPREF9712_02178 [Myroides odoratimimus CCUG
10230]
gi|423130640|ref|ZP_17118315.1| hypothetical protein HMPREF9714_01715 [Myroides odoratimimus CCUG
12901]
gi|423134331|ref|ZP_17121978.1| hypothetical protein HMPREF9715_01753 [Myroides odoratimimus CIP
101113]
gi|423327040|ref|ZP_17304848.1| hypothetical protein HMPREF9711_00422 [Myroides odoratimimus CCUG
3837]
gi|371642958|gb|EHO08516.1| hypothetical protein HMPREF9712_02178 [Myroides odoratimimus CCUG
10230]
gi|371644499|gb|EHO10030.1| hypothetical protein HMPREF9714_01715 [Myroides odoratimimus CCUG
12901]
gi|371647088|gb|EHO12598.1| hypothetical protein HMPREF9715_01753 [Myroides odoratimimus CIP
101113]
gi|404607610|gb|EKB07112.1| hypothetical protein HMPREF9711_00422 [Myroides odoratimimus CCUG
3837]
Length = 429
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 166/326 (50%), Gaps = 21/326 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD +VIA G++ + FG + +N+ ++ + + +IR +L N + + ++E+
Sbjct: 101 IFYDYVVIATGSKTNFFGNENITKNSMAMKTIPESLDIRSLVLENFEEA-LQTTDDQEQK 159
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
L++ V+VG GPTGVE +G L++ + + Y + + + + +I+ AN++L + ++
Sbjct: 160 ALMNFVIVGAGPTGVELAGALAEMKKHVLPKDYPDLDFNKMEINVIQGANKVLDAMSEKS 219
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A L GV++ G IV D +K+ G E ++W+ GV +T+
Sbjct: 220 SRKAQEFLENLGVKVYLGEIVTDYKGKKVYTKSGKEFTAETVIWTAGVMGATVDGFDATV 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
G RI ++E+ +V D+FA+GD + + P +AQ A +QG+ L + L R+
Sbjct: 280 IQRGNRIKVNEYNQVEGFTDIFAIGDVATMMTDKTPMGHPMMAQPAIQQGELLANNLIRL 339
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+D + FVY GSMATIGR KA+VDL + +GF +W VW
Sbjct: 340 -----------RDGQPLKSFVYNDKGSMATIGRNKAVVDLPK------FQFSGFFAWFVW 382
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFV 344
+L ++ +RN+ V NW ++
Sbjct: 383 MFVHLMSLIGFRNKLVVFWNWMYNYM 408
>gi|414168093|ref|ZP_11424297.1| hypothetical protein HMPREF9696_02152 [Afipia clevelandensis ATCC
49720]
gi|410888136|gb|EKS35940.1| hypothetical protein HMPREF9696_02152 [Afipia clevelandensis ATCC
49720]
Length = 425
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 174/333 (52%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ +D L++A GA + FG + A L+ + A +IRR++L ++ +E E++
Sbjct: 99 VPFDTLILATGARHAYFGHDEWEPYAPGLKTLEDATKIRRRILSAFEQAEW-ATNEAERA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
RLL V++G GPTGVE +G +++ +R + + V LIEA ILS F + L
Sbjct: 158 RLLTFVIIGAGPTGVELAGTIAELAHDTLRGDFRNFDTRKARVILIEAGPRILSGFTEDL 217
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L++ GV + G S++ + G +P ++W+ GV S + L P
Sbjct: 218 SDYAQRALTRLGVEIRLGHAVSRCSEEGVELGGEFLPASTIIWAAGVAASPAAEWLHAPA 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ + L VP D+F +GD + ++EST ++P +A A+++G+Y +
Sbjct: 278 DRAGRVMVMPDLTVPGHPDIFVIGDAA-HVESTDGKLVPGVAPAAKQEGQY-------VA 329
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+A R K G+ FVY++ G++ATIG+ A+VD + L G L+W +W
Sbjct: 330 RAIQARLRGEK---FGENFVYKNAGNLATIGKRAAIVDF------GWIQLKGRLAWWIWG 380
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ RNR VA+NW +V G+ +R+
Sbjct: 381 IAHIFFLIGLRNRLAVAMNWLWIYVRGQRSARL 413
>gi|292669723|ref|ZP_06603149.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas noxia
ATCC 43541]
gi|422343212|ref|ZP_16424140.1| hypothetical protein HMPREF9432_00200 [Selenomonas noxia F0398]
gi|292648520|gb|EFF66492.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas noxia
ATCC 43541]
gi|355378519|gb|EHG25699.1| hypothetical protein HMPREF9432_00200 [Selenomonas noxia F0398]
Length = 427
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 172/342 (50%), Gaps = 25/342 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISE 77
+I YD LV+A GA + FG V N+ ++ + A +R ++ + P +++
Sbjct: 95 EIPYDYLVLAAGATTNFFGNESVARNSFAMKTLEEAITLRSHIIHEFERASKKTDPSMTD 154
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSS 134
E + R L+ V+VGGG TG+E +G L++ I D+ ++ H D+ +HV+L+EA +L
Sbjct: 155 ERR-RHLNFVIVGGGATGIEMAGALAELI--DIFKKEFHSIDFDEVHVSLLEAMGSVLPM 211
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
L+ + L K GV + + V + D +L L+ G + ++W+ GV +K
Sbjct: 212 VPPDLQQHTIDVLRKKGVDVRLNTAVTEYDGNELKLSSGETIATKTVIWAAGVRAQDFIK 271
Query: 194 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TVLPALAQVAERQGKY 250
GR+ ++E L V + VFA+GDC+ + T + TV P Q A + K
Sbjct: 272 DCGGEVDRAGRVVVEENLLVKGSERVFAIGDCANFHHGTERPLPTVAPVATQEAAQVKKN 331
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ +L++ GR+ +LG FVYR LG+MATIG+ +A+++ + +
Sbjct: 332 IMALIS-------GRSPD----QLGK-FVYRDLGAMATIGKGEAVMNGPFPVLGFMMKAS 379
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
GF +W W +L R+ F V+V W F FG +SRI
Sbjct: 380 GFFAWFAWMFVHLIRLAGRYADFTVSVKWIWNFFFGTRVSRI 421
>gi|159185014|ref|NP_354992.2| NADH dehydrogenase [Agrobacterium fabrum str. C58]
gi|159140288|gb|AAK87777.2| NADH dehydrogenase [Agrobacterium fabrum str. C58]
Length = 421
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 165/333 (49%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I +D LV+A GA + FG + +A L+ + A IRR+LLL +++ SEEE+
Sbjct: 96 IGFDTLVLATGARHAYFGHDEWERSAPGLKTLEDATTIRRRLLLAFERAEL-ATSEEERQ 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
LL V++G GPTGVE +G +++ R + + +V V L+EA +L F + L
Sbjct: 155 ALLTFVIIGAGPTGVEMAGMIAELAHRALPAEFRNVDTRKTRVLLVEAGPRVLPVFTEDL 214
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L K GV ++ G + + + T P +VW+ GV S K L+
Sbjct: 215 STYAKEALEKLGVEVLLGTPVTACTDEGVTVGETYYPCRTVVWAAGVQASPAAKWLNAAG 274
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ + L + D+F +GD + + GK V P +A A++QG Y+ ++
Sbjct: 275 DRAGRVIVGPQLHLEDDADIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAYVAKVIK--- 330
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+ + PF Y H G++ATIG+ A++D + K L G L+W +W
Sbjct: 331 -------ARLEGKPIPAPFRYSHQGNLATIGKRAAVIDFGRFK------LKGVLAWWIWG 377
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 378 LAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|326493954|dbj|BAJ85439.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 576
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 12/218 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LV+A+GA ++TF GV EN FL+EV AQ+IRR ++ + +P ++EE
Sbjct: 153 EFLVDYDYLVVAVGARSNTFNTPGVTENCHFLKEVEDAQKIRRSVMDCFEKASLPYLNEE 212
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ + LH VVVGGGPTGVEF+ EL DF+ D+ + Y ++ + ++LIE A+ IL+ FD
Sbjct: 213 ERKKNLHFVVVGGGPTGVEFAAELHDFVTEDLSKLYPSIQHLVKISLIEAADHILTMFDK 272
Query: 138 RLRHYATTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
R+ ++A + + G+ + G + KD + + VPYG+ VWSTG+G V
Sbjct: 273 RITNFAEDKFGRDGIDVKTGYKVVKVSKDAITMQNPATGDIAVPYGMAVWSTGIGTRPFV 332
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+D K G + DEWLRV DV+AVGDC+
Sbjct: 333 --VDFMKQIGQANRRVLATDEWLRVRECDDVYAVGDCA 368
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL + N++ A + G +PF YRHLG A +G
Sbjct: 462 LPATAQVAAQQGQYLATCFNKMQAAEENPEGPIRIRGEGRHRFNPFRYRHLGQFAPLGGE 521
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y T+ +SWR R V +W F+FGRD S I
Sbjct: 522 QTAAQLPGDWVSIGHSS----QWL-WYSVYATKQISWRTRALVISDWGRRFIFGRDSSGI 576
>gi|149280183|ref|ZP_01886306.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Pedobacter sp. BAL39]
gi|149229020|gb|EDM34416.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Pedobacter sp. BAL39]
Length = 435
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 181/355 (50%), Gaps = 42/355 (11%)
Query: 4 HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
+ + + +E + YD LV+A+G E + FG+ VKE + ++ + A ++R +
Sbjct: 80 ELQQINHQRNYIETENGTLHYDYLVLAMGTETNYFGMDNVKEKSMPMKTIDDALKLRNHV 139
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-H 122
LL L + +EK +L + V+ GGGPTGVE +G L++ V + Y + +
Sbjct: 140 LLQLE-EAARSQNIKEKEKLGNVVIAGGGPTGVEIAGMLAEMGGNIVSKDYPTARKGVGK 198
Query: 123 VTLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLL 180
+ L++A +L+ + + A LSK GV+ ++ VKD K+I DG + L
Sbjct: 199 IYLVDALGTLLAPMSKKSQDEAYQVLSKLGVQIMLNTTVKDYTGDKVIFGDGQSITAATL 258
Query: 181 VWSTGV--GPSTLVKSLDLPK---SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKT 235
+W++GV P+ LP+ + G RI +DE+ +V +++VFA+GD S L+ + +
Sbjct: 259 IWASGVIGRPAP-----GLPEEVIARGRRIMVDEYNKVNGLENVFALGDIS--LQQSDEQ 311
Query: 236 VL---PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---PFVYRHLGSMATI 289
P LAQVA +Q L A++ +M G PF Y GSMA I
Sbjct: 312 FPKGHPQLAQVALQQSALL--------------AHNFLNMAEGKSLRPFKYNDKGSMAII 357
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
++KA+VDL KG GF +WLVW ++ + +RN++ +A+NW +FV
Sbjct: 358 AKFKAVVDL-----PKGF-FKGFFAWLVWLFIHIIPIAGFRNKWMLAMNWFWSFV 406
>gi|326505236|dbj|BAK03005.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 576
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 12/218 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LV+A+GA ++TF GV EN FL+EV AQ+IRR ++ + +P ++EE
Sbjct: 153 EFLVDYDYLVVAVGARSNTFNTPGVTENCHFLKEVEDAQKIRRSVMDCFEKASLPYLNEE 212
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ + LH VVVGGGPTGVEF+ EL DF+ D+ + Y ++ + ++LIE A+ IL+ FD
Sbjct: 213 ERKKNLHFVVVGGGPTGVEFAAELHDFVTEDLSKLYPSIQHLVKISLIEAADHILTMFDK 272
Query: 138 RLRHYATTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
R+ ++A + + G+ + G + KD + + VPYG+ VWSTG+G V
Sbjct: 273 RITNFAEDKFGRDGIDVKTGYKVVKVSKDAITMQNPATGDIAVPYGMAVWSTGIGTRPFV 332
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+D K G + DEWLRV DV+AVGDC+
Sbjct: 333 --VDFMKQIGQANRRVLATDEWLRVRECDDVYAVGDCA 368
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA QVA +QG+YL + N++ A + G +PF YRHLG A +G
Sbjct: 462 LPATTQVAAQQGQYLATCFNKMQAAEENPEGPIRIRGEGRHRFNPFRYRHLGQFAPLGGE 521
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y T+ +SWR R V +W F+FGRD S I
Sbjct: 522 QTAAQLPGDWVSIGHSS----QWL-WYSVYATKQISWRTRALVISDWGRRFIFGRDSSGI 576
>gi|108804058|ref|YP_643995.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rubrobacter xylanophilus DSM 9941]
gi|108765301|gb|ABG04183.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rubrobacter xylanophilus DSM 9941]
Length = 450
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 175/338 (51%), Gaps = 23/338 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ YD+LVIA+G + + FGI GV+E+A +R + A++IR +++ +V I E
Sbjct: 120 IEFPYDQLVIAVGGQPNFFGIPGVEEHALSMRGLEDAEQIRNRVIERF--EEVSLIRGEI 177
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDD 137
L VV+GGG TGVE + ++ + + Y ++ + + + L+EA EIL D
Sbjct: 178 PESKLTFVVIGGGATGVEVASQIHTLVHEHLASDYPNIDPNRVRIYLVEALPEILPELDP 237
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
LR A +L + + L + ++V + + L G E+ ++W+ G P+ +++ L
Sbjct: 238 ALRKAARNRLYRQRIEVLTNTLAEEVTADCVRLKGGGEISSENVIWTAGNRPNAVIQRLG 297
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY--LESTGKTVLPALAQVAERQGKYLFSL 254
LP I +DE+LRV +D++A+GDC+ + GK ++P AQ A ++GK ++
Sbjct: 298 LPYDEKNGIRVDEYLRVEGHRDIWAIGDCAAIPDVRQEGK-IVPPNAQAAVQEGK---TV 353
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
+ GR + + E Y+ LG + +G A+ E G+ +GFL+
Sbjct: 354 ARNVLAVLDGREDELERFE------YKPLGQLVELGSDFAV------NEVMGVRFSGFLA 401
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L WR AYL R+ S +++ VA +W +F ++++
Sbjct: 402 ALFWRLAYLVRLTSPQSKARVAADWIVSFFLRPAVTQV 439
>gi|319953480|ref|YP_004164747.1| NADH dehydrogenase (ubiquinone) [Cellulophaga algicola DSM 14237]
gi|319422140|gb|ADV49249.1| NADH dehydrogenase (ubiquinone) [Cellulophaga algicola DSM 14237]
Length = 425
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 37/349 (10%)
Query: 11 ELRTLEPWKFKI-------SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
E++ ++P K +I S+D LVIA G + + F + +NA ++ V A IR +
Sbjct: 82 EVQHIDPVKKEITTAIGILSFDYLVIATGTKTNYFNNENIAKNAMPMKTVPQALNIRSLI 141
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIH 122
L N +D + E+ LL+ +VG GPTGVE +G L++ + Y H+ +
Sbjct: 142 LQNFEKAD-DTLEVSERKALLNFCIVGAGPTGVELAGALAELKQNVFPKDYKHLDIQEMQ 200
Query: 123 VTLIEAN-EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL 180
+ L E +L + AT L K GV++ + IV D D + + L DG +
Sbjct: 201 IHLFEGGPRVLPPMSETASKKATEFLDKLGVQIHLNTIVSDFDGKTVTLKDGKTLETKNF 260
Query: 181 VWSTGV-GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLP 238
+WS GV G S + D + R ++ + +V +D+FA+GD + Y+E+ P
Sbjct: 261 IWSAGVTGASIKGLTEDSLVARLNRYKVNTFNQVAGFEDIFAIGDIA-YMETVDFPKGHP 319
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKAL 295
+AQ A +QG+ L A + K++ P F+Y G+MAT+GR KA+
Sbjct: 320 QVAQPAIQQGENL--------------AKNLKNLLANKPLKAFIYSDKGTMATVGRNKAV 365
Query: 296 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
VDL++ L GFL+W +W +L +V +RNR V NWA ++
Sbjct: 366 VDLKK------LKFGGFLAWFIWMFVHLMALVGFRNRVIVFFNWAYNYI 408
>gi|326488549|dbj|BAJ93943.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 576
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 12/218 (5%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LV+A+GA ++TF GV EN FL+EV AQ+IRR ++ + +P ++EE
Sbjct: 153 EFLVDYDYLVVAVGARSNTFNTPGVTENCHFLKEVEDAQKIRRSVMDCFEKASLPYLNEE 212
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ + LH VVVGGGPTGVEF+ EL DF+ D+ + Y ++ + ++LIE A+ IL+ FD
Sbjct: 213 ERKKNLHFVVVGGGPTGVEFAAELHDFVTEDLSKLYPSIQHLVKISLIEAADHILTMFDK 272
Query: 138 RLRHYATTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
R+ ++A + + G+ + G + KD + + VPYG+ VWSTG+G V
Sbjct: 273 RITNFAEDKFGRDGIDVKTGYKVVKVSKDAITMQNPATGDIAVPYGMAVWSTGIGTRPFV 332
Query: 193 KSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 226
+D K G + DEWLRV DV+AVGDC+
Sbjct: 333 --VDFMKQIGQANRRVLATDEWLRVRECDDVYAVGDCA 368
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL + N++ A + G +PF YRHLG A +G
Sbjct: 462 LPATAQVAAQQGQYLATCFNKMQAAEENPEGPIRIRGEGRHRFNPFRYRHLGQFAPLGGE 521
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L + S G S WL W S Y+T+ +SWR R V +W F+FGRD S I
Sbjct: 522 QTAAQLPGDWVSIGHSS----QWL-WYSVYVTKQISWRTRALVISDWGRRFIFGRDSSGI 576
>gi|403053035|ref|ZP_10907519.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Acinetobacter bereziniae LMG 1003]
Length = 430
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 36/342 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K+ YD LVIA GA + FG + A L+ + A IR ++L E E+
Sbjct: 99 KLHYDTLVIATGATHAYFGHDEWERFAPGLKTLGDATNIRERIL--------AAFEEAER 150
Query: 81 SR-------LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YIHVTLIEAN-E 130
++ L V++GGGPTGVE SG +++ + +D R + D V LIEA
Sbjct: 151 TKDPILRKALQTFVIIGGGPTGVELSGTIAE-LAKDTLSRDFRLIDPRESRVVLIEAGPR 209
Query: 131 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 190
+LS F ++L Y L + GV +V G S+ ++ DG ++P ++W+ GV S
Sbjct: 210 LLSVFPEKLSSYTRQALEQLGVEVVLGTPVTSCSEDGVVYDGKQLPAKTIIWAAGVQASP 269
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ L++ GR+ +D L V ++F +GD + GK V P +A A++QGKY
Sbjct: 270 AARWLNVESDRAGRVLVDSNLTVTGHPEIFVIGDTAAVTMEDGKLV-PGIAPAAKQQGKY 328
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ ++ N K ++ +PF Y H G++ATIGR +A+VD+ + L
Sbjct: 329 VAKTID----------NRLKGKDIKEPFKYHHQGNLATIGRSRAVVDMGK------FQLQ 372
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L+W W+ ++ ++ ++R VA++W G SR+
Sbjct: 373 GVLAWWFWKLIHIYFLIGVQSRLNVALSWLWNHSVGYRGSRL 414
>gi|58583917|ref|YP_202933.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|58428511|gb|AAW77548.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 470
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 169/334 (50%), Gaps = 24/334 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG E+A L+ ++ A +RRKLLL ++ ++
Sbjct: 142 LGYDMLLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARA 200
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
L VVGGGPTGVE +G LS+ ++ + H+ V L+EA +L SF + L
Sbjct: 201 AWLSFAVVGGGPTGVELAGTLSEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPEDL 260
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL GV + V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 261 TDKARKQLQHLGVEVHTSAPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVP 319
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I
Sbjct: 320 LDRAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------I 370
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA R + F Y+ G++ATIGR A+V + + L L+G ++W W
Sbjct: 371 AKAIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFW 420
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A++ ++ +RNRF V VNWA + + +RI
Sbjct: 421 LAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 454
>gi|307609469|emb|CBW98963.1| hypothetical protein LPW_07481 [Legionella pneumophila 130b]
Length = 738
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 166/341 (48%), Gaps = 33/341 (9%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
+ E R + F I YD LVIA GA S FG A L+ ++ +R +++ +
Sbjct: 392 INKEERLVIADNFTIPYDYLVIATGATHSYFGKDSWAPYAPGLKTINDGTSVRSRIIKSF 451
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 127
L+++ SEEE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H
Sbjct: 452 ELAEIAE-SEEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPAS 504
Query: 128 AN--------EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYG 178
AN IL +F +++ A L GV+ LV +V+ +DS +I+N +
Sbjct: 505 ANIILVQAAPRILPTFSEQISQKAQHYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSK 563
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+ W+ GV S K L L P GR+ +++ L V ++F +GD + GK V P
Sbjct: 564 SVFWAAGVAASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFVIGDTAASNAWNGKPV-P 622
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+A A++ G Y+ ++++ R PF Y H GS+AT+GR A+ +
Sbjct: 623 GIAPAAKQGGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEF 673
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ K ++G L+W W ++ +V RNR V +NW
Sbjct: 674 DRFK------ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|294944847|ref|XP_002784460.1| NADH dehydrogenase, putative [Perkinsus marinus ATCC 50983]
gi|239897494|gb|EER16256.1| NADH dehydrogenase, putative [Perkinsus marinus ATCC 50983]
Length = 475
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 187/366 (51%), Gaps = 39/366 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YDKLV+A+GA+ +T G+ GV E FL+E+ HA+ IR+ +L + + S+E K
Sbjct: 114 VPYDKLVVAVGAQPNTMGVPGVLEYTHFLKEMDHARLIRKNVL-DSFETACTAQSDERKR 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLR 140
LLH VVVGGGPTGVEF+ ELSDFI ++ Y V V++I++ E IL++FD +
Sbjct: 173 ELLHFVVVGGGPTGVEFAAELSDFIREEISHAYWEVAHLAKVSVIQSAENILNTFDAAIS 232
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT-----EVPYGLLVWSTGVGPSTLVKS 194
YAT + + +V+ VK V++ +++ D +P+G+ VW+ G+ P K
Sbjct: 233 RYATDHFKRIDIDVVKNSRVKAVEATAVVVQDMATKEERRIPFGVCVWAAGIAPRPFTKD 292
Query: 195 L-----DLPKSPGGRIGIDEWLRV-PSVQDVFAVGDCSGYLESTGKTVLPALAQVAE--- 245
L G + +L V S D+FA+GDC+G E + +L A+
Sbjct: 293 LISQLKGYQPENGRLLKTTPYLEVLGSKGDLFAIGDCAGVAEPELLPLAESLFDEADINK 352
Query: 246 -------------RQGKYLFSLLNRIG-----KAGGGRANSAKDME-LGDPFVYRHLGSM 286
R+ + F LL +G K + N K +E L + L +M
Sbjct: 353 DGEISFQEYEVIYRKIRERFPLLQGVGAKQRWKDHADKYNGGKPLEFLTRDLWEKVLANM 412
Query: 287 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 346
+ YKA+ Q +G ++ G ++ +WR Y +++VSWR R V +W +++G
Sbjct: 413 QS--SYKAMPATAQVASQQG-NITGVSTFALWRGVYASKMVSWRCRHLVIWDWIKAYLYG 469
Query: 347 RDISRI 352
RD+S++
Sbjct: 470 RDLSKM 475
>gi|340618247|ref|YP_004736700.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Zobellia galactanivorans]
gi|339733044|emb|CAZ96419.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase,
membrane [Zobellia galactanivorans]
Length = 425
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 38/336 (11%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ YD LV+A G + + FG + A ++ V A +IR +L N +D + E+
Sbjct: 99 NLGYDYLVLATGTKTNFFGNQNIARYAMPMKTVPQALDIRSLMLQNFEKAD-DCLDPVER 157
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDR 138
LL+ +VG GPTGVE +G ++ + Y H+ D + + L E +L +
Sbjct: 158 KALLNFCIVGAGPTGVELAGAFAELKNNVFPKDYRHLNIDEMEINLFEGGPRVLPPMSEN 217
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV--------GPS 189
AT L GVR+ + I D D ++L L DGT + +W+ GV
Sbjct: 218 ASKKATEFLKALGVRVHLNVIASDYDGERLTLKDGTTLNTKNFIWTAGVTGAAIEGFATH 277
Query: 190 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQG 248
LV+ L+ R ++ + +V VFA+GD + Y+E+ G P +AQ A +QG
Sbjct: 278 VLVERLN-------RYKVNRFNQVEGYDTVFAIGDIA-YMETDGFPKGHPQVAQPAIQQG 329
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+ L L R+ + K+++ PF YR G+MATIGR KA+ D+++ L
Sbjct: 330 ELLADNLERMLEG--------KELK---PFTYRDKGTMATIGRNKAVADIKK------LK 372
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
AGF +W +W +L +V +RN+ V NWA ++
Sbjct: 373 FAGFFAWFIWMFVHLMALVGFRNKVVVFFNWAYNYI 408
>gi|54293654|ref|YP_126069.1| hypothetical protein lpl0707 [Legionella pneumophila str. Lens]
gi|53753486|emb|CAH14941.1| hypothetical protein lpl0707 [Legionella pneumophila str. Lens]
Length = 738
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 33/341 (9%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
+ E R + F I YD LVIA GA S FG A L+ ++ +R +++ +
Sbjct: 392 INKEERLVIADNFTIPYDYLVIATGATHSYFGKDSWTPYAPGLKTINDGTSVRSRIIKSF 451
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 127
L+++ SEEE+ + L+ V+VG GPTGVE +G L + R+ VK++ H
Sbjct: 452 ELAEIAE-SEEERKQFLNFVIVGAGPTGVELAGALVEL------ARFGIVKEFRHFDPAS 504
Query: 128 AN--------EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYG 178
AN IL +F +++ A L GV+ LV +V+ +DS +I+N +
Sbjct: 505 ANIILVQAAPRILPTFSEQISQKAQHYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSK 563
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+ W+ GV S K L L P GR+ +++ L V ++F +GD + GK V P
Sbjct: 564 SVFWAAGVAASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFVIGDTAASNAWNGKPV-P 622
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+A A++ G Y+ ++++ R PF Y H GS+AT+GR A+ +
Sbjct: 623 GIAPAAKQGGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEF 673
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ K ++G L+W W ++ +V RNR V +NW
Sbjct: 674 DRFK------ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|408785758|ref|ZP_11197500.1| NADH dehydrogenase [Rhizobium lupini HPC(L)]
gi|408488477|gb|EKJ96789.1| NADH dehydrogenase [Rhizobium lupini HPC(L)]
Length = 421
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I +D LV+A GA + FG + +A L+ + A IRR+LLL +++ SEEE+
Sbjct: 96 IRFDTLVLATGARHAYFGHDEWERSAPGLKTLEDATTIRRRLLLAFERAEL-ATSEEERQ 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
LL V++G GPTGVE +G +++ + + + +V V L+EA +L F + L
Sbjct: 155 ALLTFVIIGAGPTGVEMAGMIAELAHKALPAEFRNVDTRKTRVLLVEAGPRVLPVFTEDL 214
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L K GV ++ G S + + T P +VW+ GV S K L+
Sbjct: 215 SAYAKEALEKLGVEVLLGTPVTACSDEGVTVGETHYPCRTVVWAAGVQASPAAKWLNAAA 274
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR + L + D+F +GD + + GK V P +A A++QG Y +
Sbjct: 275 DRAGRAIVGPQLNLEDDPDIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAY-------VA 326
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
K R + PF Y H G++ATIG+ A++D + L L G L+W +W
Sbjct: 327 KVIKARLDGKP---FPSPFRYSHQGNLATIGKRAAVIDFGR------LKLKGVLAWWIWG 377
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 378 LAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|92117133|ref|YP_576862.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrobacter hamburgensis X14]
gi|91800027|gb|ABE62402.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrobacter hamburgensis X14]
Length = 488
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 162/328 (49%), Gaps = 34/328 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ YD LV+A GA S FG A L+ V A EIRR+LL+ ++V I E+
Sbjct: 122 PLPYDFLVLATGAMHSYFGHDEWAPFAPGLKRVEDATEIRRRLLIAFEKAEV-AIDARER 180
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN-EIL 132
LL V+VGGGPTG+E +G ++ RY+ V+D+ + L+EA IL
Sbjct: 181 QDLLSFVIVGGGPTGIELAGAAAEI------ARYALVRDFRCIDPRASRIVLVEAGPRIL 234
Query: 133 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
+ + L YA + L + GV + +V D + +++ G +P ++W+ GV S
Sbjct: 235 PALPEALSAYAQSSLERMGVTVRTSTMVTACDEKGVVVATGERIPALTVIWAAGVKASPA 294
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+ G I ++ L +P +VFA+GD + + + +P +A A++ G+Y+
Sbjct: 295 AAWIKADCDRAGHIKVNPDLSIPDQPNVFAIGDTATVFWN--ERTVPGIAPAAKQMGRYV 352
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
L + + GRA F YRH G +ATIGR A+V + + L L G
Sbjct: 353 GQL---VARRIAGRAEPRA-------FNYRHYGDLATIGRKSAVVSIGR------LRLKG 396
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+++W+ W A++ ++ RNR VA +W
Sbjct: 397 WIAWVFWSVAHIYFLIGARNRLSVAFDW 424
>gi|340030497|ref|ZP_08666560.1| NADH dehydrogenase protein [Paracoccus sp. TRP]
Length = 426
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 174/336 (51%), Gaps = 25/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LVIA GA + FG + +A L+ + A IRR+LLL +++ +EE++
Sbjct: 94 RVPYDTLVIATGARHAYFGKDQWEADAPGLKTLEDATTIRRRLLLAFERAEL-AENEEQR 152
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDR 138
LL V+G GPTGVE G +++ R + + + + + L+EA +L +F D+
Sbjct: 153 QALLTFAVIGAGPTGVELVGIIAELAHRILPREFRRIDTRQSRILLLEAGPRVLPAFSDK 212
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
L YA L + GV ++ G S I+ DG + ++W+ GV S L
Sbjct: 213 LSDYAKRALERHGVEVMTGAPVTECSDGGIVLDGRFISARTVIWAAGVQASRAKDWLGAE 272
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR- 257
GR+ + L +P +F +GD + ++ES G++V P +A A++QGK+ +
Sbjct: 273 ADRAGRVVVTPELTLPGDPAIFVLGDTA-HVESGGQSV-PGVAPAAKQQGKHAARTIRAR 330
Query: 258 -IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
G+ G G PF YR +G++ATIGR A+++ + + + G+ +W
Sbjct: 331 LAGRQGPG------------PFRYRDMGNLATIGRNAAVIEFGRFR------MTGWFAWW 372
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+R +VA++W F+ G++ +R+
Sbjct: 373 IWGIAHIYFLIGTRSRLFVALSWLWVFLSGQNSARL 408
>gi|373952091|ref|ZP_09612051.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mucilaginibacter paludis DSM 18603]
gi|373888691|gb|EHQ24588.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mucilaginibacter paludis DSM 18603]
Length = 437
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 166/328 (50%), Gaps = 27/328 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A G+ + FG ++ + ++ + A +R +L NL + + + E +
Sbjct: 101 IKYDYLVLATGSTTNFFGNKQIEHFSMPMKSIPEALNLRSMILQNLEEA-ILLTTREARE 159
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDRL 139
L+ VVVG GPTGVE SG +++ + + Y + KD + V L+E ++L ++
Sbjct: 160 PYLNFVVVGAGPTGVELSGSIAELRNHILHKDYPELNKDEMKVYLVEGLPKVLQVMSEQA 219
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+ L + GV ++ + VKD D +++ DG + ++WS GV + LP
Sbjct: 220 SAKSAEFLKEMGVEVMTSVMVKDYDGKQITFADGKSIKTHNVIWSAGVMGQVIE---GLP 276
Query: 199 K---SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
K S G RI D+ RV ++FA+GD + + + P +A VA +QGK+L L
Sbjct: 277 KEAISRGNRIQTDDINRVNGYANIFAIGDVAAVITTDTPKGHPGVAPVAIQQGKHLAKNL 336
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
++ + E +PF Y GSMATIGR KA+VD+ + + GF +W
Sbjct: 337 VKM-----------LNNEPTEPFKYFDKGSMATIGRNKAVVDIGK------IHFQGFFAW 379
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTF 343
L W +L +VS+RN+ V +NW ++
Sbjct: 380 LTWMFVHLISLVSFRNKVVVFINWIGSY 407
>gi|424885046|ref|ZP_18308657.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|424886426|ref|ZP_18310034.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393175777|gb|EJC75819.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393176808|gb|EJC76849.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2012]
Length = 421
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 172/340 (50%), Gaps = 30/340 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL----MLSDVPGI 75
+ YD LV+A GA + FG + A L+ + A IRR++LL M SD P +
Sbjct: 94 MTLGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMESD-PAV 152
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 133
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA L
Sbjct: 153 ----RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRALP 208
Query: 134 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
SF + L YA L K GV + G V + + + + + T V +VW+ GV S
Sbjct: 209 SFAEELSAYAEKALEKLGVEIHLGRAVTECSADGVKIGE-TFVASRTIVWAAGVTASPAA 267
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
+ L+ P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+
Sbjct: 268 RWLNAPADRAGRVAVEKGLSAPGLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVA 326
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
++ RA + G PF YRH GS+ATIG+ A++D + K L G+
Sbjct: 327 KVI---------RARLSGKPAPG-PFRYRHQGSLATIGQSAAIIDFGRIK------LKGW 370
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 371 IAWWIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|110636675|ref|YP_676882.1| NADH dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
gi|110279356|gb|ABG57542.1| NADH dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
Length = 423
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 165/327 (50%), Gaps = 26/327 (7%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD +VIA G + + FG ++EN+ L+ + +R +L+N + +EE+
Sbjct: 99 NYDYVVIAAGCKTNFFGNKVIEENSYTLKSTSDSIALRNHVLINF--EKIISAPKEEQEA 156
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEANE-ILSSFDDRL 139
L + V+VGGGPTGVE +G ++ I R++ + D+ + + LIE ++ L+S +
Sbjct: 157 LFNIVIVGGGPTGVELAGAFAE-IKRNILPKDYPGIDFTKLRIMLIEGSKNTLNSMSELA 215
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+ L K GV + VK+ D + L++G +P L+W+ GV +T D
Sbjct: 216 HKASRMYLEKMGVEIQTELFVKNYDGKIAELSNGERIPTASLIWAAGVTTNTFDGLEDSV 275
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-LPALAQVAERQGKYLFSLLNR 257
P RI +D V +V+AVGD + Y+E+ P LA VA Q K L S L
Sbjct: 276 YGPAKRIKVDRTSLVSGYANVYAVGDIA-YMETPKYPKGHPQLANVAINQAKNLASNLKA 334
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
I K+ L + F Y+ LGSMATIG+ KA+VDL + GF +WL
Sbjct: 335 I----------QKNKTLTE-FEYKDLGSMATIGKNKAVVDL------PFIKFKGFFAWLT 377
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFV 344
W +L ++S +N+ + +NWA ++
Sbjct: 378 WMFVHLMLILSVKNKLIIFINWAWAYI 404
>gi|409196735|ref|ZP_11225398.1| NADH dehydrogenase [Marinilabilia salmonicolor JCM 21150]
Length = 428
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 167/333 (50%), Gaps = 38/333 (11%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
SYD L++A G + FG +++NA L+ + + IR +L V + ++ R
Sbjct: 103 SYDYLILATGCRTNYFGNANIQKNAFSLKTTYQSITIRNHILTTF--EKVIAAPKADRER 160
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT--LIE-ANEILSSFDDRL 139
+L+ +VG GPTGVE +G S+ I +++ + H D T L+E +N +L++
Sbjct: 161 MLNLTIVGAGPTGVELAGAFSE-IKKEILPKDYHDIDLSKFTIRLVEGSNHVLNNMSKAS 219
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A L K GV L++ VKD D + L L+ G + ++W+ GV T K+ +P
Sbjct: 220 GEAAEKYLKKMGVVLLKNTFVKDYDGENLTLSSGETIKSATVIWAAGV---TGRKTEGVP 276
Query: 199 KSP---GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQGKYLFSL 254
G RI ++ +V ++FAVGD + Y+E+ P +A VA Q + L
Sbjct: 277 ADAITRGNRIIVNRQNKVQGFDNIFAVGDIA-YMETPDYPNGHPQVANVAINQARLL--- 332
Query: 255 LNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
A + K ++ G P + Y+ LGSMATIGR KA+VDL + G
Sbjct: 333 -----------AKNLKQLQQGKPVADYKYKDLGSMATIGRNKAVVDL------PFIRFKG 375
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+++WLVW +L ++S RNR + +NWA +V
Sbjct: 376 YIAWLVWMFLHLMLILSVRNRLIIFINWAWLYV 408
>gi|356542881|ref|XP_003539893.1| PREDICTED: external NADH-ubiquinone oxidoreductase 1,
mitochondrial-like [Glycine max]
Length = 573
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 150/256 (58%), Gaps = 11/256 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV C + D L + +F + YD LV+A+GA+ +TF GVKEN FL++V AQ+IR
Sbjct: 137 KVFCRSNIDNL--VGSNEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRL 194
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P +S++E+ LH VVVGGGPTGVEF+ EL D++ D+ + Y VKD +
Sbjct: 195 SVIDCFEKAVLPSLSDDERRSNLHFVVVGGGPTGVEFAAELHDYVQEDLIKLYPTVKDKV 254
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTE 174
+TLI++ + IL+ FD+R+ +A + ++ GV + G KD+ + D
Sbjct: 255 KITLIQSGDHILNMFDERISSFAEQKFTRDGVEVQTGCRVVAVNDKDITVKVKSTGDVCS 314
Query: 175 VPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 232
VP+GL+VWSTG+ +++ ++ ++ + +EWLRV +DV+A+GDCS +
Sbjct: 315 VPHGLIVWSTGISTLPVIRDFMEEIGQTKRHVLATNEWLRVNGCEDVYAIGDCSSITQRK 374
Query: 233 GKTVLPALAQVAERQG 248
+ A+ + A++
Sbjct: 375 IMDDITAIFEAADKNN 390
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIG----KAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 292
LPA AQVA +QG YL NR G R S PF YRHLG A +G
Sbjct: 459 LPATAQVAAQQGAYLARCFNRRDHTEENPEGPRRFSGSGRHRFLPFRYRHLGQFAPLGGE 518
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+A +L + S G S WL W S Y ++ VSWR R V +W F+FGRD SR+
Sbjct: 519 QAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVMSDWTRRFIFGRDSSRV 573
>gi|330798742|ref|XP_003287409.1| hypothetical protein DICPUDRAFT_78261 [Dictyostelium purpureum]
gi|325082556|gb|EGC36034.1| hypothetical protein DICPUDRAFT_78261 [Dictyostelium purpureum]
Length = 643
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 140/264 (53%), Gaps = 36/264 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL----MLSDVPGIS 76
K+ YD+LVI +G+E S+FG GV+EN FL+ A +IR+K++ + VPG +
Sbjct: 214 KLPYDQLVIGVGSEPSSFGTKGVEENTIFLKHAMDAHKIRQKIMDCFENASIQKMVPGTT 273
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSF 135
EE+ LLH V+VGGGPT VE SG L D+I D+ + + H+ Y +TLI+ A+ +L+++
Sbjct: 274 EEDLKNLLHFVLVGGGPTAVEASGSLHDYIKEDLSKMFPHIAQYSKITLIQSADHLLNTY 333
Query: 136 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT--------------------- 173
D ++ Y Q +SG+ ++ +V ++++
Sbjct: 334 DLKISEYTEGQFQRSGIEVLTNTRAVEVKKDRIVIMKKAHQRPPGEPLKETENPKKGPEV 393
Query: 174 ----EVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSV--QDVFAVGD 224
E+P+G+ VWSTGVGP+ LV+S + R I D L+V + ++V+AVGD
Sbjct: 394 SVPVEIPFGMCVWSTGVGPNDLVRSFCNSIETQKNSRAITTDHQLQVIGIKNKNVYAVGD 453
Query: 225 CSGYLESTGKTVLPALAQVAERQG 248
CS +S + L + A+ G
Sbjct: 454 CSTISQSLLMAKINDLFKEADTNG 477
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKA 294
T LP+ AQ A + GKYL N K G G+ ++ +PF Y+HLG+ A IG+ A
Sbjct: 539 TTLPSTAQCANQMGKYLADSFNE--KHGKGKDHTV------EPFHYKHLGNFAYIGKSNA 590
Query: 295 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ D+ + G+ + +++W+ YL + S+RN+F V +W T +FGRDISRI
Sbjct: 591 IADIPDLIKGGGIGV-----YIMWKFVYLEKQFSFRNKFLVFTDWIKTGLFGRDISRI 643
>gi|335034407|ref|ZP_08527756.1| NADH dehydrogenase [Agrobacterium sp. ATCC 31749]
gi|333794204|gb|EGL65552.1| NADH dehydrogenase [Agrobacterium sp. ATCC 31749]
Length = 421
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I +D LV+A GA + FG + +A L+ + A IRR+LLL +++ SEEE+
Sbjct: 96 IGFDTLVLATGARHAYFGHDEWERSAPGLKTLEDATTIRRRLLLAFERAEL-ATSEEERQ 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
LL V++G GPTGVE +G +++ R + + +V V L+EA +L F + L
Sbjct: 155 ALLTFVIIGAGPTGVEMAGMIAELAHRALPAEFRNVDTTKTRVLLVEAGPRVLPVFTEDL 214
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L K GV ++ G + + + T P +VW+ GV S K L
Sbjct: 215 STYARQALEKLGVEVLLGTPVTACTDEGVTVGETYYPCRTVVWAAGVQASPAAKWLGAAA 274
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ + L + D+F +GD + + GK V P +A A++QG Y+ ++
Sbjct: 275 DRAGRVIVGPQLHLEDDADIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAYVAKVIE--- 330
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+ + PF Y H G++ATIG+ A++D + K L G L+W +W
Sbjct: 331 -------ARLEGKPVPAPFRYSHQGNLATIGKRAAVIDFGRFK------LKGVLAWWIWG 377
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 378 LAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|398354228|ref|YP_006399692.1| NADH dehydrogenase-like protein [Sinorhizobium fredii USDA 257]
gi|390129554|gb|AFL52935.1| NADH dehydrogenase-like protein [Sinorhizobium fredii USDA 257]
Length = 439
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 169/339 (49%), Gaps = 32/339 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA + FG A L+ + A IRR++LL +++ EE+ +
Sbjct: 114 VPYDTLVLATGATHAYFGHDEWTSVAPGLKTLEDATTIRRRVLLAFEQAEI----EEDPA 169
Query: 82 R---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 136
R LL ++G GPTGVE +G +++ R + + + V L+EA IL +F
Sbjct: 170 RRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPDEFRRIDTRQARVVLVEAGPRILPAFA 229
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L YA T L K GV + G V D + + + D + VP LVW+ GV S K L
Sbjct: 230 EELSAYAMTALGKLGVEVRTGTPVTDCTAAGVKIGD-SFVPSRTLVWAAGVQASPAAKWL 288
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GR +D+ L P +VF +GD + + G V P +A A++QG Y+ ++
Sbjct: 289 GIEADRAGRAMVDQDLTAPGNPNVFVIGDTASVKQENGAPV-PGIAPAAKQQGAYVARVI 347
Query: 256 N-RI-GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
R+ GK G F YRH GS+ATIG+ A++D + K L G +
Sbjct: 348 RARLEGKPAPGH------------FRYRHQGSLATIGKRAAIIDFGRIK------LKGGI 389
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 390 AWWFWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 428
>gi|238927409|ref|ZP_04659169.1| NADH dehydrogenase [Selenomonas flueggei ATCC 43531]
gi|238884691|gb|EEQ48329.1| NADH dehydrogenase [Selenomonas flueggei ATCC 43531]
Length = 427
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 165/338 (48%), Gaps = 17/338 (5%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD--VPGISEE 78
+ISYD LV+A G + FG V N+ ++ + A +R ++ + E
Sbjct: 95 EISYDYLVLAAGGTTNFFGNESVARNSYGMKTLQEAIALRGHIVHEFERASKKTDPSHTE 154
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSSF 135
E+ R L+ V+VGGG TG+E +G + + I DV ++ H D+ +HVTL+EA +L
Sbjct: 155 ERLRHLNFVIVGGGATGIEMAGAIVELI--DVFKKEFHTIDFSEVHVTLLEAMGSVLPMV 212
Query: 136 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
L+ + L K GV + + V D L+L DG +P ++W+ GV +K
Sbjct: 213 PPDLQQHTIDVLRKKGVDVRLNTAVTAYDGNDLVLKDGEIIPTKTVIWAAGVRAQDFIKD 272
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
GR+ ++E L V VFA+GDC+ + T + LP +A VA ++ + +
Sbjct: 273 CGGEVDRAGRVIVEENLLVKGSDCVFAIGDCANFQHGTERP-LPTVAPVATQEAMQVKT- 330
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
N + G + +LG FVY LG+MATIGR +A+++ + +GF +
Sbjct: 331 -NIMALIAGKTPD-----QLGK-FVYHDLGAMATIGRGEAVMNGPMPVLGFNIKASGFFA 383
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W W +L R+ F V+V W F FG ++RI
Sbjct: 384 WFAWMLVHLIRLAGRYADFTVSVKWIWNFFFGTRLARI 421
>gi|424910766|ref|ZP_18334143.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392846797|gb|EJA99319.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae USDA 2370]
Length = 421
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I +D LV+A GA + FG + +A L+ + A IRR+LLL +++ SEEE+
Sbjct: 96 IRFDTLVLATGARHAYFGHDEWERSAPGLKTLEDATTIRRRLLLAFERAEL-ATSEEERQ 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
LL V++G GPTGVE +G +++ + + + +V V L+EA +L F + L
Sbjct: 155 ALLTFVIIGAGPTGVEMAGMIAELAHKALPAEFRNVDTRKTRVLLVEAGPRVLPVFTEDL 214
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L K GV ++ G S + + T P +VW+ GV S K L+
Sbjct: 215 SAYAKEALEKLGVEVLLGTPVTACSDEGVTVGETHYPCRTVVWAAGVQASPAAKWLNAAA 274
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR + L + D+F +GD + + GK V P +A A++QG Y +
Sbjct: 275 DRAGRAIVGPQLNLEDDPDIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAY-------VA 326
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
K R + PF Y H G++ATIG+ A++D + K L G L+W +W
Sbjct: 327 KVIKARLDGKP---FPSPFRYSHQGNLATIGKRAAVIDFGRFK------LKGVLAWWIWG 377
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 378 LAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|374849468|dbj|BAL52483.1| pyridine nucleotide-disulphide oxidoreductase family protein
[uncultured candidate division OP1 bacterium]
gi|374849615|dbj|BAL52626.1| pyridine nucleotide-disulphide oxidoreductase family protein
[uncultured candidate division OP1 bacterium]
gi|374856762|dbj|BAL59615.1| pyridine nucleotide-disulphide oxidoreductase family protein
[uncultured candidate division OP1 bacterium]
Length = 425
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 175/331 (52%), Gaps = 31/331 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE-- 79
I Y+ +V+A G+ + FG+ V A L+++ A E+R N +L + E
Sbjct: 95 IPYEYVVLATGSVTNYFGMQSVAHIAHELKDIPEALELR-----NHILRCFEAAARESDP 149
Query: 80 --KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 135
+ R L V+VG GP GVE++G LS+ I + + +S + + + L+EA ++L +F
Sbjct: 150 IARQRWLTFVIVGAGPNGVEYAGALSELIRLVLVRDFSELDMKSVRIVLVEALGQVLPAF 209
Query: 136 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
+L YA QL + G+ + + V DV + L+ G + L+W+ GV S LV
Sbjct: 210 APKLGQYAQWQLERRGIEVRLNTRVLDVSGDTVRLSSGETLETKTLIWTAGVKASDLVTV 269
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
LP++ GRI +D++LR ++VF +GD + +++ + LP LA+ A ++G ++
Sbjct: 270 PPLPRTRAGRIEVDQFLRAKGYENVFVIGDLAAFVQDGRE--LPMLARPAMQEGTHVAEN 327
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
+ R+G+ + PF YR G MATIGR A+ L++ +SL GF+
Sbjct: 328 ILRLGRG-----------QSLIPFRYRDPGIMATIGRNSAVAQLKR------VSLTGFIG 370
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
WL W +L ++ +RNRF V +NWA ++F
Sbjct: 371 WLAWLLLHLILLIGFRNRFAVLLNWAWEYIF 401
>gi|373948532|ref|ZP_09608493.1| NADH dehydrogenase [Shewanella baltica OS183]
gi|386325623|ref|YP_006021740.1| NADH dehydrogenase [Shewanella baltica BA175]
gi|333819768|gb|AEG12434.1| NADH dehydrogenase [Shewanella baltica BA175]
gi|373885132|gb|EHQ14024.1| NADH dehydrogenase [Shewanella baltica OS183]
Length = 429
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 25/306 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LV+ALG+ ++TF G +EN FL + +A+ KLL L+ E
Sbjct: 111 LSYDYLVLALGSVSNTFNTKGAEENCIFLDSLENAERFHHKLLDALL-------QLNESQ 163
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRL 139
L +VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +++
Sbjct: 164 GKLSIGIVGAGATGVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPEKV 223
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDL 197
A + L K G++L G+ VK+V +Q + DG + L VW+ GV GP+ K L
Sbjct: 224 SARAQSVLDKIGIKLHLGVQVKEVTAQGFVTPDGDVIEASLKVWAAGVKGPAVCAKFTSL 283
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLN 256
P +P +I +D +RV +D++A+GDC+ + GK V P AQ A++ L+ +++N
Sbjct: 284 PITPRNQIDVDACMRVKGQEDIYAIGDCAALILENGKAV-PPRAQSADQMADRLYKNIVN 342
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ EL PFVY+ GS+ ++ R+ A+ +L N S + G ++ L
Sbjct: 343 RL----------QDKAEL--PFVYKDYGSLVSLSRFSAVGNLMGNLRSGDFFIEGHVARL 390
Query: 317 VWRSAY 322
++ S Y
Sbjct: 391 MYVSLY 396
>gi|401401734|ref|XP_003881082.1| nadh dehydrogenase, related [Neospora caninum Liverpool]
gi|325115494|emb|CBZ51049.1| nadh dehydrogenase, related [Neospora caninum Liverpool]
Length = 646
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 144/263 (54%), Gaps = 35/263 (13%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
FK+ YD LVIA+G+E +TFGI V NA FL+EV HA IR+K++ N L+ +P E+E
Sbjct: 237 FKLKYDYLVIAVGSETNTFGIKDVAANAFFLKEVEHAMAIRKKVMNNFELAALPQTPEKE 296
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ RLLH V+VGGGPTGVE + E +DFI D+ + + + ++ ++LIE + +L ++
Sbjct: 297 RDRLLHFVIVGGGPTGVESAAEFADFIKEDMSKYFPQLIPHVSISLIEGGSRLLGTYPPD 356
Query: 139 LRHYATTQLSKS-GVR-LVRGIVKDVDSQKL--------ILNDGTEVPYGLLVWSTGVGP 188
+ +A L V+ L+R V VD+ + + E+ +G L+W++GVG
Sbjct: 357 ISAFAEKTLRDELHVKLLLRSTVVGVDANSVRYVSTEAGASKEPKEMLHGFLLWASGVGE 416
Query: 189 STLVKSL---DLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
LVK + + P++ G + +D R+ + +V+A+GDC+ P LA
Sbjct: 417 VPLVKKIVAQNYPQTDGKSRLRGLPVDPQFRLLNQPNVYALGDCAA-------IAPPRLA 469
Query: 242 QVAERQGKYLFSLLNRIGKAGGG 264
A+ LFS KAG G
Sbjct: 470 DAAQE----LFS------KAGAG 482
>gi|399044509|ref|ZP_10738112.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF122]
gi|398056929|gb|EJL48909.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF122]
Length = 423
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 171/339 (50%), Gaps = 28/339 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGIS 76
+ YD LV+A GA + FG + A L+ + A IRR++LL ++ P I
Sbjct: 94 MTLRYDSLVLATGATHAYFGRDDWEPVAPGLKTLEDATTIRRRVLLAFERAETETDPAI- 152
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSS 134
+ LL +VG GPTGVE +G + + + + + ++ V L+EA +L +
Sbjct: 153 ---RDALLTFTIVGAGPTGVELAGIIVELARNALPREFRNIDTRKTRVVLVEAGPRVLPT 209
Query: 135 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
F + L YA L + GV L G V + + + ++G +P +VW+ G+ S K
Sbjct: 210 FAEELSAYAGKALEELGVELHIGERVLECTAAGVETSEGI-IPSRTIVWAAGIQASPAAK 268
Query: 194 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
LD+P GR+ +++ L P DVF VGD + ++ +G V P +A A++QG Y
Sbjct: 269 WLDVPADRAGRVIVEKDLTAPGFPDVFVVGDTASVIQESGAPV-PGIAPAAKQQGAYAAK 327
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
++ RA A PF YRH GS+ATIG+ A++D + K L G++
Sbjct: 328 VI---------RARLAAKPAPA-PFRYRHQGSLATIGQSAAIIDFGRIK------LKGWI 371
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 372 AWWIWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 410
>gi|390564740|ref|ZP_10245504.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nitrolancetus hollandicus Lb]
gi|390172013|emb|CCF84830.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nitrolancetus hollandicus Lb]
Length = 456
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 159/326 (48%), Gaps = 20/326 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++ALG T GI G+ E A ++ + HA +R L+ L +D+ + K
Sbjct: 116 LYYDHLILALGGVPRTAGIPGLAEYAFDVQRLSHAFALRNHLIDTLEQADI-ETDPDRKR 174
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLR 140
+LL V+ GGG GVE + + D + +R + +HV LI + N ++ RL
Sbjct: 175 QLLTFVIAGGGANGVEVAAHIRDLVYGAIRYYQNIEPADLHVILIHSGNRLIPDLPSRLG 234
Query: 141 HYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+YA L + G+ L V V+ + L DG + +V S GV P+ +V +L +P
Sbjct: 235 YYAERLLRRRGIEILFDRRVSRVEPDAVYLTDGEVIRADTIVGSVGVMPNPMVANLPVPH 294
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
P G I ++ L VP +V+A+GD + ++ P AQ A R+ K L+ R
Sbjct: 295 DPRGAIAVNNDLSVPGYPNVWALGDNAFVVDPYTGKPYPLTAQTAVREAK----LVAR-N 349
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
A R K PF YR +G+M ++G A+ +R GL+ +GF++W ++R
Sbjct: 350 IAASLRGEPLK------PFTYRTIGAMVSLGHRSAVAYIR------GLTFSGFIAWWLYR 397
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVF 345
+ YL ++ W R V +W +F
Sbjct: 398 TYYLLQLPRWDKRLRVVFDWTLDLLF 423
>gi|417933455|ref|ZP_12576780.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK182B-JCVI]
gi|340772018|gb|EGR94532.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK182B-JCVI]
Length = 460
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 163/338 (48%), Gaps = 36/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
ISYD L+++ G A+ FG G EN+ + A +R + + L D+ + +++
Sbjct: 119 ISYDYLILSQGVGANFFGTPGAAENSHTIYT--RASSLRARDAIFTHLEDL----DTQRN 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
+ ++VGGGPTGVE +G L++ + + V D +HVTL+E A+ +L FD L
Sbjct: 173 KTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMADHLLMPFDPAL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
RHY QL K GV + + + +V ++L DG +P +++W+ GVG V +
Sbjct: 233 RHYTRRQLHKRGVDVRTKTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVANWGFE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ GGRI L V +FA+GD + E P LAQ A + G+ +
Sbjct: 293 QGRGGRIATAGTLLVNGQDRIFAIGDGAINTEDP----QPQLAQPAIQGGECV------- 341
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
A +ELG+P F Y G+MATIGR A+V L S+ G +W
Sbjct: 342 -------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKFKFTGIGAW 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 352
L W + ++ ++ RNR +N ++ F R+ I
Sbjct: 390 LTWVTVHVYTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|187922128|ref|YP_001893770.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia phytofirmans PsJN]
gi|187713322|gb|ACD14546.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia phytofirmans PsJN]
Length = 439
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 165/335 (49%), Gaps = 26/335 (7%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
SYD LV+A GA + FG + A L+ + A IR ++L ++ ++++
Sbjct: 102 SYDTLVLATGATHAYFGHDEWEPFAPGLKTLEDATTIRGRILAAFEEAERTS-DPQQRAA 160
Query: 83 LLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDD 137
L V++GGGPTGVE +G ++ D + RD R S V LIEA + +LS F +
Sbjct: 161 LQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGQRLLSVFPE 217
Query: 138 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L Y L K GV +V G S + ++ GT + +VW+ GV S + L
Sbjct: 218 DLSAYTRQALEKLGVEVVLGTPVTGCSAEGVVYGGTPLSARTIVWAAGVQASPAARWLSA 277
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GR+ + L V ++FA+GD + GK V P +A A++QGKY+ SL+ R
Sbjct: 278 TSDRAGRVVVGPDLTVAGHPEIFAIGDTASCTMPDGKPV-PGIAPAAKQQGKYVASLIGR 336
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
K + PF YRH G++ATIGR A++D+ + K L G +W +
Sbjct: 337 ----------RLKGKPVDGPFKYRHQGNLATIGRSLAVIDMGRVK------LRGAFAWWI 380
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W+ A++ ++ +NR VA++W G SRI
Sbjct: 381 WKLAHIYFLIGTQNRLSVALSWVWNHSIGYRGSRI 415
>gi|320529376|ref|ZP_08030464.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas artemidis
F0399]
gi|320138342|gb|EFW30236.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas artemidis
F0399]
Length = 426
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 173/356 (48%), Gaps = 22/356 (6%)
Query: 5 CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL 64
E V E + L +I+YD LV+A GA + FG +N+ ++ + A +R L+
Sbjct: 79 AEGVDQERKVLLTNHGEIAYDYLVLAAGATTNFFGNESGAQNSYPMKSLQEAIALRSHLV 138
Query: 65 LNL-MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--I 121
+ V ++E+ R L+ V+VGGG TG+E +G + + I DV ++ H D+ +
Sbjct: 139 HEFERAARVNETDDDERQRHLNFVIVGGGATGIELAGAIIELI--DVFKKEYHSLDFSRV 196
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
HV L+EA +L L+ L K GV + + V D D L L G +P
Sbjct: 197 HVILLEAMGSVLPMVPPDLQQKTIDVLRKKGVDVRLNTAVTDYDGSTLSLKGGDVIPTKT 256
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TV 236
++W+ GV +K GRI ++E L V VFA+GDC+ + T + TV
Sbjct: 257 VIWAAGVRAQDFIKDCGGEVDRAGRIIVEENLLVRGSDCVFAIGDCANFQHGTERPLPTV 316
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 296
P Q A + G+ + +L++ GK K ELG FVY+ LG+MATI R +A++
Sbjct: 317 APVATQEALQVGRNIMALIH--GK---------KPEELGR-FVYQDLGAMATIARGEAVM 364
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ + +GF++W W +L R+ F V + W ++ G+ ++RI
Sbjct: 365 NGPIPVIGINMKASGFIAWTAWMFVHLMRLAGKYANFTVMMKWIWNYILGKRLARI 420
>gi|221215312|ref|ZP_03588277.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Burkholderia multivorans CGD1]
gi|221164744|gb|EED97225.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Burkholderia multivorans CGD1]
Length = 435
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 166/337 (49%), Gaps = 30/337 (8%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD LV+A GA + FG A L+ + A IR ++L +++ ++++
Sbjct: 102 TYDTLVLATGATHAYFGHDEWGAFAPGLKTLEDATAIRGRILAAFEEAELTS-DPQQRAA 160
Query: 83 LLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDD 137
L V++GGGPTGVE +G ++ D + RD R S V LIEA +LS F +
Sbjct: 161 LQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGPRLLSVFPE 217
Query: 138 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L Y L K GV +V G S ++ G + +VW+ GV S + L
Sbjct: 218 DLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGKPLSAKTIVWAAGVKASPAARWLGA 277
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GR+ + L V +VFA+GD + + GK V P +A A++QGKY+ +L+ R
Sbjct: 278 ASDRAGRVVVGPDLTVAGRPEVFAIGDTASCTMADGKPV-PGIAPAAKQQGKYVANLIGR 336
Query: 258 --IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
GK+ G PF+YRH G++ATIGR A++D+ + K L G +W
Sbjct: 337 RLKGKSADG------------PFIYRHQGNLATIGRSLAVIDMGRVK------LRGAFAW 378
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W+ A++ ++ RNR VA++W G SRI
Sbjct: 379 WIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|336322448|ref|YP_004602415.1| NADH dehydrogenase (ubiquinone) [Flexistipes sinusarabici DSM 4947]
gi|336106029|gb|AEI13847.1| NADH dehydrogenase (ubiquinone) [Flexistipes sinusarabici DSM 4947]
Length = 410
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 171/333 (51%), Gaps = 24/333 (7%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
YD L+IA GA + F A L+++ HAQ +R K+L +++ EEE+ +
Sbjct: 95 QYDYLIIACGAVENYFKNTNWVNFAPPLQKLSHAQHLRNKILNAFEMAE-KSKDEEERKK 153
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDRLR 140
L V+VGGGPTGVE +G + + + + + ++ + + LIEAN IL SFD +L
Sbjct: 154 HLTFVIVGGGPTGVELAGAIGEITRITLTKEFRNIDPSLSRIILIEANNTILRSFDKKLI 213
Query: 141 HYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
A L GV++ V D+ + + + T + ++W+ G ++L + ++ K
Sbjct: 214 KKALRDLESLGVQVWTNSRVTDISGDYINIANET-IKTSTIMWAAGTMANSLAEKINCDK 272
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
G+I ++ L + DV+AVGD + E G+ VLP LA VA +QGKY + I
Sbjct: 273 DQMGKILVENDLSLNQFPDVYAVGDIV-HFEQNGR-VLPGLAPVAMQQGKYAAKV---IL 327
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
K G+ PF YR G +ATIGR KA+ ++++ K ++G L+W+ W
Sbjct: 328 KREAGKPYK--------PFKYRDKGQLATIGRSKAIAEIKRFK------VSGTLAWITWL 373
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++ + ++NR V + WA ++ + +RI
Sbjct: 374 FVHILYLTGFKNRMLVMLQWAWSYFTFKKGARI 406
>gi|256420722|ref|YP_003121375.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chitinophaga pinensis DSM 2588]
gi|256035630|gb|ACU59174.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chitinophaga pinensis DSM 2588]
Length = 438
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 175/345 (50%), Gaps = 47/345 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR----RKLLLNLMLSDVPGIS 76
++ YD L+ A G+ + FG ++E+A ++ + A +IR ++ +L+L D
Sbjct: 102 ELKYDYLIFATGSNTNFFGNKVIEEHAIGMKSLIEAVQIRNYVIKQFEESLLLKD----- 156
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIE-A 128
E + L V+VGGGPTGVE +G ++ ++Y KDY +++ LIE +
Sbjct: 157 EAQIKAKLSFVMVGGGPTGVELAGAFAEL------RKYIMPKDYPELPVSLMNIYLIEGS 210
Query: 129 NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 187
N IL+ + + L K GV L +VK+ D + L+L++G + L+W+ GV
Sbjct: 211 NRILNGMSEHSSQKSLESLQKLGVNVLCNAVVKEYDGKTLVLSNGETLSTQSLLWAAGVK 270
Query: 188 PSTLVKSLDLPKS---PGGRIGIDEWLRVPSVQDVFAVGDCSGYL-ESTGKTVLPALAQV 243
V +P P GRI ++E+ V Q+++A+GD + + + P +AQV
Sbjct: 271 G---VPVAGIPAEVILPNGRIQVNEFNLVNGTQNIYAIGDIAQMVNDPKFPRGYPMVAQV 327
Query: 244 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303
A +QG L L + K+ G S K PF Y+ LGSMATIGR A+ E
Sbjct: 328 AIQQGANLAENLLKTIKSSG---RSPK------PFKYKDLGSMATIGRNHAVA------E 372
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW-ATTFVFGR 347
G+ L+GF++W+VW + +L ++ +RN+ V NW F F R
Sbjct: 373 FAGMKLSGFMAWMVWMAVHLMSLLGFRNKLVVFSNWFYRYFTFDR 417
>gi|242213282|ref|XP_002472470.1| predicted protein [Postia placenta Mad-698-R]
gi|220728452|gb|EED82346.1| predicted protein [Postia placenta Mad-698-R]
Length = 503
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 119/179 (66%), Gaps = 2/179 (1%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
++++ YDKLVIA+GA TF I GVKE+A FL+++ A+ IR ++L ++ P I+++
Sbjct: 155 QYELKYDKLVIAVGAYNRTFFIPGVKEHAHFLKDIRDARAIRARILECFEQANQPTITDD 214
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
++ +LLH +VGGGPTGVEF+ EL D + +++Q Y + ++L + A IL SFD
Sbjct: 215 DRRKLLHFCIVGGGPTGVEFAAELHDLLHAEIKQSYPSLARMAKISLYDVAPRILGSFDV 274
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
L+ +AT + ++ G+ L + V V+S K+ + + EV +GLLVWSTG+ P+ LV+++
Sbjct: 275 GLQDWATKKFTREGINILTQHHVDRVESGKMYVKEQGEVHFGLLVWSTGLAPNPLVQNI 333
>gi|125560105|gb|EAZ05553.1| hypothetical protein OsI_27768 [Oryza sativa Indica Group]
gi|125602154|gb|EAZ41479.1| hypothetical protein OsJ_26003 [Oryza sativa Japonica Group]
Length = 580
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 127/216 (58%), Gaps = 8/216 (3%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YD LVIA+GA ++TF GV+EN FL+EV AQ+IRR ++ + +P + EE
Sbjct: 157 EFLVDYDYLVIAVGARSNTFNTPGVEENCFFLKEVEDAQKIRRNVMDCFERASLPYLDEE 216
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
E+ + LH VVVGGGPTGVEF+ EL DF+ D+ + Y ++ + ++LIE A+ IL+ FD
Sbjct: 217 ERKKNLHFVVVGGGPTGVEFAAELHDFVTEDLSKLYPSIQHLVKISLIEAADHILTMFDK 276
Query: 138 RLRHYATTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
R+ +A + + G+ + G + KD + + VPYG+ VWSTG+G +
Sbjct: 277 RITEFAEDKFGRDGIDVKTGYKVVKVAKDAITMQNPATGDIAVPYGMAVWSTGIGTRPFI 336
Query: 193 KSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
G R + DEWLRV V+AVGDC+
Sbjct: 337 SEFMKQIGQGKRRVLATDEWLRVRECDGVYAVGDCA 372
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL N++ A + G PF YRHLG A +G
Sbjct: 466 LPATAQVASQQGQYLARCFNKMKDAEENPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGE 525
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L +S+ WL W S Y T+ +SWR R V +W+ F+FGRD S I
Sbjct: 526 QTAAQL----PGDWISIGHSTQWL-WYSVYATKQISWRTRALVISDWSRRFIFGRDSSCI 580
>gi|227822527|ref|YP_002826499.1| NADH dehydrogenase [Sinorhizobium fredii NGR234]
gi|227341528|gb|ACP25746.1| NADH dehydrogenase [Sinorhizobium fredii NGR234]
Length = 422
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA + FG A L+ + A IRR++LL ++ SEE+ +
Sbjct: 97 IPYDTLVLATGATHAYFGHDEWAHVAPGLKTLEDATTIRRRVLLAFEQAE----SEEDPA 152
Query: 82 R---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 136
R LL ++G GPTGVE +G +++ R + + + V L+EA IL +F
Sbjct: 153 RRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPDEFRRIDTRQARVILVEAGPRILPAFA 212
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+ L YA +L K GV + G V D + + + D + V LVW+ GV S K L
Sbjct: 213 EELSAYAMAELGKLGVEVRTGTPVTDCTAGGVRIGD-SFVASCTLVWAAGVQASPAAKWL 271
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GR +D+ L P D F +GD + + G V P +A A++QG Y+ ++
Sbjct: 272 GIDADRAGRAMVDQDLTAPDNPDAFVIGDTALIKQENGAPV-PGIAPAAKQQGAYVARVI 330
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
RA G PF YRH GS+ATIG+ A++D + K L G L+W
Sbjct: 331 ---------RARLDGQPAPG-PFRYRHQGSLATIGKRAAIIDFGRIK------LKGGLAW 374
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 WIWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 411
>gi|367472824|ref|ZP_09472399.1| putative NADH dehydrogenase protein [Bradyrhizobium sp. ORS 285]
gi|365274903|emb|CCD84867.1| putative NADH dehydrogenase protein [Bradyrhizobium sp. ORS 285]
Length = 416
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 159/323 (49%), Gaps = 25/323 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ +D LV+A G S F A L+ + A IR ++L ++ E +
Sbjct: 99 LPFDYLVLATGVTTSYFNHPEWARFAPGLKTIEDATRIRAQILTCFERAERTD-DEALRQ 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
+L+ V+VGGGPTGVE +G ++D + + ++ V LIEA + +LS+F + L
Sbjct: 158 KLMTFVIVGGGPTGVEMAGSIADIARNVLAGDFRNIDPQSATVVLIEAGQRLLSNFAEEL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
Y L + V ++ G V D S + L++G + L+W+ GV + +
Sbjct: 218 SDYTRKALQQMNVDVITGAAVTDCTSDSVTLSNGRHIACCCLLWAAGVRATPAASWIGAK 277
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL--N 256
GRI +D+ LRV ++FAVGD + S+G +P LA A++ G+Y+ L+ +
Sbjct: 278 SDRAGRIMVDDHLRVSPHTNIFAVGDIAA--ASSGGKPVPGLAPAAKQMGRYVGELIAGD 335
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
IG+ GRA PFVY H G +ATIGR A+V L+ L L G L W
Sbjct: 336 VIGR---GRAPR--------PFVYHHQGDLATIGRKSAVVSLKH------LKLTGVLGWA 378
Query: 317 VWRSAYLTRVVSWRNRFYVAVNW 339
W ++ ++ RNR VA+NW
Sbjct: 379 FWGVVHIYFLIGLRNRITVALNW 401
>gi|410635465|ref|ZP_11346078.1| NADH dehydrogenase [Glaciecola lipolytica E3]
gi|410144968|dbj|GAC13283.1| NADH dehydrogenase [Glaciecola lipolytica E3]
Length = 432
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 28/338 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG + A L+ + A +IR ++L + ++ + ++E
Sbjct: 100 RLSYDTLVLATGATHAYFGRDEWEPFAPGLKTLEDATKIRERILTSFEEAERTCDLVQQE 159
Query: 80 KSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 134
+ V++GGGPTGVE +G ++ D + RD R V LIEA +LS
Sbjct: 160 ALKTF--VIIGGGPTGVELAGTIAELARDTLARDFRNMEPSKS---RVVLIEAAPRLLSV 214
Query: 135 FDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
F ++L Y L K GV ++ G+ S + ++ DG ++ +VW+ GV S +
Sbjct: 215 FPEKLSEYTRKALEKLGVEVITGMPVTECSGEGVVYDGKQIKANTIVWAAGVKASPAAQW 274
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
L + GR+ +D+ L + D+F +GD + GK V P +A A+++GKY+ L
Sbjct: 275 LGVEADRAGRVIVDQHLNITDHLDIFVIGDTAAATMEDGKLV-PGIAPAAKQEGKYVAKL 333
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
+ + K E PF Y H G++ATIG A+VD + L G +
Sbjct: 334 IMK----------RLKGKEDNPPFKYSHQGNLATIGHSLAVVDF------GWIRLKGLFA 377
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W +W+ ++ ++ RNR VA++W G SRI
Sbjct: 378 WWIWKLVHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|85001033|ref|XP_955235.1| NADH dehydrogenase [Theileria annulata strain Ankara]
gi|65303381|emb|CAI75759.1| NADH dehydrogenase, putative [Theileria annulata]
Length = 549
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 135/228 (59%), Gaps = 13/228 (5%)
Query: 9 TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 68
D L + EP F + YD LVI +GA+ +TFG GV+E A FL+E+ HA+ +K++ N
Sbjct: 132 CDPLDSGEP-SFSVPYDFLVIGVGAQTNTFGTKGVEEYAYFLKEIEHAEVAFQKIVDNFR 190
Query: 69 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128
+ +P +S+ E+ RLLH +VVGGGPTGVE +GELS + R + + Y + ++ V+++EA
Sbjct: 191 AASMPSLSDSERRRLLHFLVVGGGPTGVECTGELSVLMSRHLGKCYPELMPFVKVSIVEA 250
Query: 129 NE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN-----DGTEVPYGLLV 181
+ +L S + +KS V + G +V +V + +L + E+ GL++
Sbjct: 251 GQRLLPSLSQSTSKFVLNVFNKSNVNMYFGKVVSEVKQKSCVLKEIKTGNTEEIECGLVL 310
Query: 182 WSTGVGPSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDC 225
W++G+ + LV L ++P+S + +D++LR+ + ++F +GDC
Sbjct: 311 WASGLKETDLVTKLKRKWNIPESSRALL-VDQYLRLQGLDNIFCLGDC 357
>gi|402488487|ref|ZP_10835298.1| transmembrane NADH dehydrogenase [Rhizobium sp. CCGE 510]
gi|401812549|gb|EJT04900.1| transmembrane NADH dehydrogenase [Rhizobium sp. CCGE 510]
Length = 421
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 172/336 (51%), Gaps = 22/336 (6%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ YD LV+A GA + FG + A L+ + A IRR++LL +++
Sbjct: 94 LTLGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMEA-DPAV 152
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L SF +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPSFAE 212
Query: 138 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + G V D ++ + + + T V +VW+ GV S K L
Sbjct: 213 ELSAYAQKALEKLGVEVHLGKPVTDCNADGVKIGE-TFVASRTIVWAAGVTASPAAKWLG 271
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VPADRAGRVVVEKDLTAPGLADVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ G A ++ F YRH GS+ATIG+ A++D + K L G+++W
Sbjct: 331 --ARLSGKPAPAS--------FRYRHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|126173313|ref|YP_001049462.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS155]
gi|386340074|ref|YP_006036440.1| NADH dehydrogenase [Shewanella baltica OS117]
gi|125996518|gb|ABN60593.1| NADH dehydrogenase [Shewanella baltica OS155]
gi|334862475|gb|AEH12946.1| NADH dehydrogenase [Shewanella baltica OS117]
Length = 429
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 25/306 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LV+ALG+ ++TF G +EN FL + +A+ KLL L+ E
Sbjct: 111 LSYDYLVLALGSVSNTFNTKGAEENCIFLDSLENAERFHHKLLDALL-------QLNESQ 163
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRL 139
L +VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +++
Sbjct: 164 GKLSIGIVGAGATGVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPEKV 223
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDL 197
A + L K G++L G+ VK+V Q + DG + L VW+ GV GP+ K L
Sbjct: 224 SARAQSVLDKIGIKLHLGVQVKEVTVQGFVTPDGDVIEASLKVWAAGVKGPAVCAKFTSL 283
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLN 256
P +P +I +D +RV +D++A+GDC+ + GK V P AQ A++ L+ +++N
Sbjct: 284 PITPRNQIDVDACMRVKGQEDIYAIGDCAALILENGKAV-PPRAQSADQMADRLYKNIVN 342
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ EL PFVY+ GS+ ++ R+ A+ +L N S + G ++ L
Sbjct: 343 RL----------QDKAEL--PFVYKDYGSLVSLSRFSAVGNLMGNLRSGDFFIEGHVARL 390
Query: 317 VWRSAY 322
++ S Y
Sbjct: 391 MYVSLY 396
>gi|338732457|ref|YP_004670930.1| pyridine nucleotide-disulfide oxidoreductase [Simkania negevensis
Z]
gi|336481840|emb|CCB88439.1| pyridine nucleotide-disulfide oxidoreductase [Simkania negevensis
Z]
Length = 428
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 175/329 (53%), Gaps = 25/329 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEEK 80
+SYD LV+A GA S FG + A L+ + A +IR K+L++ ++ + ISE EK
Sbjct: 96 VSYDYLVLAPGARHSYFGNDQWEPLAPGLKTITDALKIREKILVSFEKAERMDSISEAEK 155
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
L+ V++G GPTGVE +G +++ + + + + + + + L+EA +L F ++
Sbjct: 156 --FLNFVIIGAGPTGVEMAGAIAEIAHKTLFKNFRRINPEKSKIYLVEAAPRVLPPFPEK 213
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L A L GVR+V G +V DV + + + D +P ++W+ G + +K+LD+
Sbjct: 214 LSIKARKNLEDMGVRVVTGELVTDVTEEGVQVGDDF-IPARNIIWAAGNQAAPFLKTLDV 272
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P GR+ ++ L VP ++F +GD + + K LPA+A A +QG+Y+ ++ +
Sbjct: 273 PLDRQGRVIVESDLTVPGYPELFVIGDAACAMGKDNKP-LPAIAPTAIQQGRYVSKIIKK 331
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
R PF Y GS+ATIG KA+ + + + ++GFL+WL
Sbjct: 332 QIPKKKRR-----------PFRYFDKGSIATIGTNKAVGYVGK------ILMSGFLAWLT 374
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFG 346
W ++ +VS+R+RF V +NW ++ G
Sbjct: 375 WGFIHVFYLVSYRSRFTVMLNWVFHYMTG 403
>gi|432336862|ref|ZP_19588330.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430776194|gb|ELB91649.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 434
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 164/336 (48%), Gaps = 40/336 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L+ A GA + FG E L+ V A +RR+++ + S+ E+
Sbjct: 99 IGYDSLIAATGARQAYFGHDEFAEVTYALKTVADADRLRRQIVR--CFEEAHTTSDPERR 156
Query: 82 R-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDDR 138
R LLH +V+G GPTGVE +G++ + R + + + + VTL+E ANE L F +
Sbjct: 157 RDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGANETLPVFGGK 216
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGVGP---- 188
L Y L K+GV +V G +V D+D L+ + + ++WS G+
Sbjct: 217 LSKYTQDSLEKAGVEVVLGTMVTDIDEHGATLSSPSAGFEKRLTADTIIWSAGIQANDFA 276
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ L GGR+ +DE L V DVFA+GD + LPA + A + G
Sbjct: 277 AVLADRTGCETGRGGRLLVDEDLTVGRYDDVFAIGDMASL------NNLPAQSPFAMQGG 330
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+++ +++ G RA LG PF YR GSMA I R++A+ + + +
Sbjct: 331 RHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK------VE 371
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 372 LTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|424854604|ref|ZP_18278962.1| NADH dehydrogenase [Rhodococcus opacus PD630]
gi|356664651|gb|EHI44744.1| NADH dehydrogenase [Rhodococcus opacus PD630]
Length = 434
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 164/336 (48%), Gaps = 40/336 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L+ A GA + FG E L+ V A +RR+++ + S+ E+
Sbjct: 99 IGYDSLIAATGARQAYFGHDEFAEVTYALKTVADADRLRRQIVR--CFEEAHTTSDPERR 156
Query: 82 R-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDDR 138
R LLH +V+G GPTGVE +G++ + R + + + + VTL+E ANE L F +
Sbjct: 157 RDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGANETLPVFGGK 216
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGVGP---- 188
L Y L K+GV +V G +V D+D L+ + + ++WS G+
Sbjct: 217 LSKYTQDSLEKAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGIQANDFA 276
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ L GGR+ +DE L V DVFA+GD + LPA + A + G
Sbjct: 277 AVLADRTGCETGRGGRLLVDEDLTVGRYDDVFAIGDMASL------NNLPAQSPFAMQGG 330
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+++ +++ G RA LG PF YR GSMA I R++A+ + + +
Sbjct: 331 RHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK------VE 371
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 372 LTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|182414397|ref|YP_001819463.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Opitutus terrae PB90-1]
gi|177841611|gb|ACB75863.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Opitutus terrae PB90-1]
Length = 436
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 175/336 (52%), Gaps = 17/336 (5%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ SYD LV+A+G S FG + A L+ + A EIRR++L++ ++ S+ +K
Sbjct: 101 ETSYDYLVLAMGGRTSYFGHDDWERFAPGLKSLDDALEIRRRVLMSFECAETE--SDPQK 158
Query: 81 SR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDD 137
R L+ +VVGGGPTGVE +G ++ + + + + V LIE A +L+ F
Sbjct: 159 RRELMTLIVVGGGPTGVELAGTFAELARTVLVRDFDRIDPSKARVLLIEGAPRVLAHFPP 218
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L A QL + GV + G VK + ++ + DG E+ G+++W+ GV S L + L
Sbjct: 219 DLSASAQRQLERLGVEVRVGKHVKAIRHHEVEMPDG-EIIRGIVIWAAGVSASPLTQQLG 277
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ GRI + L +P +VF +GD + G+ V+P ++ A + G++ LL
Sbjct: 278 VETDRAGRIKVLPDLSLPGHPEVFVLGDLVTLTDPKGQ-VVPGVSPAAMQMGEHAVKLLA 336
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ GR ++ PFVY GSMATIGR KA+ ++ + L +G+ +W+
Sbjct: 337 EEIR---GRTSTTNAAAGRAPFVYWDKGSMATIGRSKAVAEIGR------LHFSGYPAWM 387
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W +L +V +R++F V V W +++ + +RI
Sbjct: 388 AWLFVHLIFLVGFRSKFSVFVQWVYSYLTYKRGARI 423
>gi|299141906|ref|ZP_07035041.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oris C735]
gi|298576757|gb|EFI48628.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oris C735]
Length = 424
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 165/326 (50%), Gaps = 22/326 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA + FG ++ +A ++ V A +R +L NL ++ +E +
Sbjct: 102 IHYDDLVLAAGATTNFFGNKNIEASALPMKSVSEAMRLRNTILQNLERAETED-NEACRQ 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDRL 139
L++ +VGGGP+GVE +G L++ + + Y + + + LI A +L + ++
Sbjct: 161 ALMNIAIVGGGPSGVEIAGALAEMKRTILPRDYPDLDTSCMRIYLINAAPRLLGAMAEKS 220
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A L + GV ++ G +V D +LIL DG +P ++W +G+ + +
Sbjct: 221 SREAEKALKELGVEIMAGCMVTDYVDHELILKDGNHLPVETVIWVSGIRANHIDGIPADS 280
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GGRI D + RV +++V+A+GD C + P LAQVA +Q + L L R
Sbjct: 281 IGRGGRIITDRFNRVKGMENVYAIGDQCLIEGDKAYPQGHPQLAQVAMQQAENLAMNLKR 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
K E PF YR+LG+MATIGR KA+V++ + L GF +WL+
Sbjct: 341 QDKN-----------EQEHPFSYRNLGTMATIGRKKAVVEIGR------LKFGGFFAWLL 383
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTF 343
W +L ++ RN+ V +NW ++
Sbjct: 384 WLVVHLRSILGVRNKTIVFLNWMWSY 409
>gi|326335260|ref|ZP_08201455.1| NADH dehydrogenase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692531|gb|EGD34475.1| NADH dehydrogenase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 444
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 167/326 (51%), Gaps = 23/326 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++SYD LVIA G++ + +G +++ A ++ V A ++R ++ NL + + + EE+
Sbjct: 105 ELSYDYLVIATGSQTNFYGNANIQKYAMPMKTVPEAVDMRSLVIQNLEAAILTN-NLEER 163
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFDDR 138
+ L++ V+VGGGPTGVE +G ++ + Y + ++V LI+A+ +L ++
Sbjct: 164 NSLMNFVIVGGGPTGVELAGAFAELKKHILPTDYPDLDIRKMNVNLIQADSRLLIGMGEK 223
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
A L K GV + VKD D + ++ N Y L+W+ GV L++ L
Sbjct: 224 SSEKAKEYLEKMGVSIWFNTFVKDYDGENVVTNTHNFQAY-TLIWTAGV-KGNLIEGLSQ 281
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GGR ++E+ +V ++FA+GD + P +AQ A +QGK L L R
Sbjct: 282 ESIIGGRYAVNEFNQVKGYDNIFAIGDIACMANEKQPKGHPMVAQPAIQQGKLLAKNLKR 341
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
I N A PF Y GSMAT+GR KA+V+LR G+ +G+ +W++
Sbjct: 342 I------FCNKAM-----IPFNYFDKGSMATVGRNKAVVELR------GMRFSGWFAWIL 384
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTF 343
W + +L +V +RN+ NW +
Sbjct: 385 WITVHLAFLVGFRNKMVTLSNWIVQY 410
>gi|298244179|ref|ZP_06967985.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ktedonobacter racemifer DSM 44963]
gi|297551660|gb|EFH85525.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ktedonobacter racemifer DSM 44963]
Length = 441
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 170/327 (51%), Gaps = 22/327 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L++A GA S FG + A L+ + A IRR++LL +++ + +
Sbjct: 107 EIPYDYLILATGAAHSYFGHDEWSDFAPGLKTITDATHIRRQVLLAFEAAEMEP-DPDRQ 165
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFDDR 138
L+ V+VG GPTGVE SG +++ + + + + H+ V L+EA IL +F ++
Sbjct: 166 QELMTFVLVGAGPTGVEMSGAIAELAHKALARDFRHIDPRSARVILVEAMPRILPAFPEK 225
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L A L+ GV + V+++D + +++ G +P ++W+ GV S K L
Sbjct: 226 LAQKARKALNHLGVEVRTNSPVENIDREGVVVA-GQRIPARNVIWTAGVAASPAGKWLQA 284
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GR+ + L VP + +VF +GD S +++ GK LP +A VA +QG Y+ SL+
Sbjct: 285 EVDRAGRVKVQPDLSVPGLPNVFVIGDTSSLMQN-GKP-LPGVAPVAMQQGNYIGSLI-- 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ K G +A+ F Y + G++AT+GR + D + + + GFL WL+
Sbjct: 341 VQKVKGSQASEPA-------FQYTNKGNLATVGRSFGIADFGR------VRIWGFLGWLL 387
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFV 344
W + ++ ++ +RNR V WA ++
Sbjct: 388 WLAVHIFFLIGFRNRVLVIFQWAWAYL 414
>gi|384250764|gb|EIE24243.1| FAD/NAD(P)-binding domain-containing protein [Coccomyxa
subellipsoidea C-169]
Length = 525
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 193/405 (47%), Gaps = 74/405 (18%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F++ YD L++A+GA +TFG+ GV EN +++ A+ +R ++ L+++P ++EE
Sbjct: 123 FQMKYDVLIVAIGAVTNTFGVPGVDENCFYMKSAEDAKALRERINACFELANLPDTTDEE 182
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHV-KDYIHVTLIEANE-ILSSF 135
+ RLL V+VGGGPTG E + E++D I+ D+ + + + + + + I++++ ILS+F
Sbjct: 183 RKRLLSFVIVGGGPTGTELAAEMNDLVIILEDMLRYFPRITRSQVTIKQIDSHDHILSAF 242
Query: 136 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE---VPYGLLVWSTGVGPSTL 191
D + YAT +SG+ LV VK V+ +++ G E +P+G +W+TG+ L
Sbjct: 243 DRTIAEYATEHFRRSGIDLVLACRVKAVEPGAVVVQKGKETDRIPFGTCIWTTGIRMHPL 302
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS-----------------------GY 228
+ L + + +D LRV +FA+GD + G
Sbjct: 303 AERLADGQEHWRSLMVDNNLRVKGSDSIFALGDAATIEQERVLRHAEELFEQGDANHDGM 362
Query: 229 LESTGKTVL--------PALAQVAERQGK-------YLFSLLNRIGKA-----GGGRANS 268
L S L P LA++A R K L + K+ +A
Sbjct: 363 LSSDELQQLLLLNVKKYPQLAEIAARVPKNTVLSKEAFLKHLEELDKSLRSVPATAQAAH 422
Query: 269 AKDMELG--------DP------------FVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+ LG DP F Y+ LG++A IG KA++D + L
Sbjct: 423 QEGHYLGKLFRKYKIDPATKEVVPEDAPEFEYKPLGTIAYIGHDKAVLD--PGPSAPFLR 480
Query: 309 -LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ G+L L W+SA + +S++N + V+ ++ +FGRDIS +
Sbjct: 481 YIRGWLMGLGWKSAEVFMQISYKNMWLVSRDFLKAKIFGRDISDV 525
>gi|325001307|ref|ZP_08122419.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Pseudonocardia sp. P1]
Length = 479
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 35/338 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA + FG E+A ++ + A+ +R ++L L++V +EEE+
Sbjct: 109 LPYDTLVVAAGATHAYFGHPEWAEHAPGMKSIEDARLLRSRILGAYELAEV-APTEEEQR 167
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRL 139
VVVG GPTGVE +G+LS+ + + Y + +D + L A +L F +L
Sbjct: 168 AWTTFVVVGAGPTGVELAGQLSELARHVLPREYRAIDTRDARIILLDAAPAVLPPFAKKL 227
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGTE-VPYGLLVWSTGVGPSTLVKSL 195
++Y L K GV + + + D+D+ + + GT+ + VW+ GV S L +
Sbjct: 228 QNYTRKTLEKKGVEVRLNTMATDIDADSITVKGPQGTDRIVARTKVWAAGVQASPLAEL- 286
Query: 196 DLPKSPG------GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
L K+ G GR+ +D +P +DVFA+GD ++ LP +AQVA +QG
Sbjct: 287 -LAKASGGEVDRAGRLSVDPDCSLPGRRDVFAIGDMVSTIDR-----LPGVAQVAMQQGT 340
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
Y+ L+ +A S D PF Y GSMATIG +A+ D+R G+
Sbjct: 341 YVGKLI---------KARSKGDDTTPAPFTYFDKGSMATIGAREAVADVR------GVKF 385
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G+L +L+W ++ ++ W NR NW + + R
Sbjct: 386 TGWLGYLMWCYVHVMFLIGWGNRLGTLYNWVRSLRYAR 423
>gi|224124644|ref|XP_002319383.1| predicted protein [Populus trichocarpa]
gi|222857759|gb|EEE95306.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 131/216 (60%), Gaps = 9/216 (4%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LV+A+GA+ +TF GV EN FL+E+ AQ++RR ++ + +PG++EEE
Sbjct: 160 FSLEYDYLVVAIGAQVNTFNTPGVTENCHFLKELEDAQKLRRSVIDCFEKASIPGLTEEE 219
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDR 138
+ LH VVVGGGPTGVEF+ EL DFI D+ Y VKD + +TLI++ + IL+ FD+R
Sbjct: 220 RRTNLHFVVVGGGPTGVEFAAELHDFIQEDLVNVYPMVKDLVKITLIQSGDHILNMFDER 279
Query: 139 LRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDG--TEVPYGLLVWSTGVGPSTLV 192
+ +A + + + + G V D + + + G T +P+GL+VWSTG+ +V
Sbjct: 280 ISTFAEKKFQRDCIEVQTGCRVLSVSDKEITMKVKSKGEITSIPHGLVVWSTGISTRPVV 339
Query: 193 KSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
K R + +EWLRV ++V+A+GDC+
Sbjct: 340 KDFMEQIGQANRRVLATNEWLRVKECENVYALGDCA 375
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 207 IDEWLRVPSVQDVFAVGDCSGY------LESTGKTVLPALAQVAERQGKYLFSLLNR--- 257
+ + ++ P +D+ V D G+ ++S K+ LPA AQVA +QG YL NR
Sbjct: 432 VKDLMKDPEGKDIKEV-DIEGFKLALAQVDSQAKS-LPATAQVAAQQGAYLSRCFNRREH 489
Query: 258 -IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
G R PF Y+HLG A +G +A +L + S G S WL
Sbjct: 490 CKDNPEGPRRFVGSGRHAFVPFRYKHLGQFAPLGGEQAAAELPGDWVSIGRST----QWL 545
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W S Y ++ VSWR R + +W F+FGRD SRI
Sbjct: 546 -WYSVYASKQVSWRTRVLLVSDWTRRFIFGRDSSRI 580
>gi|418299313|ref|ZP_12911147.1| NADH dehydrogenase [Agrobacterium tumefaciens CCNWGS0286]
gi|355535114|gb|EHH04404.1| NADH dehydrogenase [Agrobacterium tumefaciens CCNWGS0286]
Length = 421
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 165/333 (49%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I +D LV+A GA + FG + +A L+ + A IRR+LLL +++ SE+E+
Sbjct: 96 IGFDTLVLATGARHAYFGRDEWERSAPGLKTLEDATTIRRRLLLAFERAEL-ATSEDERQ 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
LL V++G GPTGVE +G +++ + + + +V V L+EA +L F + L
Sbjct: 155 ALLTFVIIGAGPTGVEMAGMIAELAHKALPPEFRNVDTRKTRVLLVEAGPRVLPVFTEDL 214
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L K GV ++ G S + + T P +VW+ GV S K L+
Sbjct: 215 SAYAKEALEKLGVEVLLGTPVTACSDEGVTVGETYYPCRTVVWAAGVQASPAAKWLNAAA 274
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR + L + D+F +GD + + GK V P +A A++QG Y+ ++
Sbjct: 275 DRAGRAIVGPHLNLEDDADIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAYVAKVIK--- 330
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
R + L PF Y H G++ATIG+ A++D + K L G L+W +W
Sbjct: 331 ----ARLDGKP---LPAPFRYSHQGNLATIGKRAAVIDFGRFK------LKGVLAWWIWG 377
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 378 LAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|317505341|ref|ZP_07963269.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella salivae
DSM 15606]
gi|315663555|gb|EFV03294.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella salivae
DSM 15606]
Length = 424
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 166/327 (50%), Gaps = 22/327 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA + FG ++ +A ++ V + +R +L NL ++ +E K
Sbjct: 102 IHYDDLVLAAGATTNFFGNKNIEASALPMKSVSESMRLRNTILQNLERAETED-NEARKQ 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDRL 139
L++ +VGGGP+GVE +G L++ + + Y + +H+ LI A +L + +R
Sbjct: 161 ALMNIAIVGGGPSGVEIAGVLAEMKQTILPRDYPDLDTSCMHIYLINATPRLLGAMSERS 220
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A L + GV ++ +V D ++L+L DG + ++W +G+ + +
Sbjct: 221 SREAEKALKELGVEVMTNCMVTDYVDKELVLKDGQRISAETVIWVSGIKANNIDGIPTES 280
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GRI +D + RV ++DV+A+GD C + P LAQVA +Q K L L R
Sbjct: 281 IGHAGRILVDRFNRVKGLKDVYAIGDQCIVEGDEAYPYGHPQLAQVAIQQAKTLAKNLIR 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
K D E PF Y +LG+MATIGR KA+V++ + L GF +WL+
Sbjct: 341 QEKG---------DTE--QPFSYHNLGTMATIGRKKAVVEIGK------LKFGGFFAWLL 383
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFV 344
W +L ++ +N+ V +NW +++
Sbjct: 384 WLIVHLRSILGVKNKTIVFLNWMWSYM 410
>gi|320162268|ref|YP_004175493.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319996122|dbj|BAJ64893.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 427
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 169/339 (49%), Gaps = 29/339 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD L++A+G + + FG + +A L+ + A+ IR +L + S EK
Sbjct: 97 EVRYDVLILAMGGQTNFFGNATLARHALTLKTLQDAERIRDHVLR--LFEHASRESNVEK 154
Query: 81 SR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSFDD 137
R +L V GGGP+GVE +G LS+ I +++ + I V L+EA + +L +
Sbjct: 155 RRAMLTFAVAGGGPSGVEMAGALSELIHGVLKRDFPGFDLSIARVILLEAADRLLPAMPP 214
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L+ L GV + + V+ D + L DG ++P L+W TG+ + L + +
Sbjct: 215 ALQQATLQALHAKGVEVWLNAPVESYDGTLIRLKDGRQIPSRTLIWVTGIRAAGLAERIP 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
P++ GRI + L+VP +VF +GD + YLE LP +A VA +Q +
Sbjct: 275 APRASNGRIRVQPTLQVPGYPEVFVIGDAA-YLEDEHGNPLPMVAPVALQQADWAV---- 329
Query: 257 RIGKAGGGRANSAKDMELGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
AN +E PF YR G MATIGR +A+ L + + L GFL+
Sbjct: 330 ---------ANVQCLLEGKPLLPFRYRDPGMMATIGRNQAVARLGRFR------LRGFLA 374
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
WL+W ++ +++ +RNR V +NWA F++ R + I
Sbjct: 375 WLMWVVVHIFQLIGFRNRLAVMLNWAWDYFLYDRALRLI 413
>gi|332666957|ref|YP_004449745.1| NADH dehydrogenase (ubiquinone) [Haliscomenobacter hydrossis DSM
1100]
gi|332335771|gb|AEE52872.1| NADH dehydrogenase (ubiquinone) [Haliscomenobacter hydrossis DSM
1100]
Length = 432
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 171/341 (50%), Gaps = 50/341 (14%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN----LMLSDVPGISE 77
++YD LVIA GA+ + FG + A ++ V A +R ++L + L ++D
Sbjct: 102 VNYDHLVIATGADTNFFGNATLAAKALPMKSVSEALYLRNRILDDYEKTLSITD-----P 156
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-N 129
EE+ + V+VGGGPTGVE +G L++ MR +Y KDY I + LI++ +
Sbjct: 157 EERQGYIDIVIVGGGPTGVEIAGSLAE--MR----KYILPKDYPEMDCSEIEIFLIQSGD 210
Query: 130 EILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188
++L D A L K V+++ V D + + + DGT + ++W+ G+
Sbjct: 211 QLLKGMSDEAAKKALQFLQKLDVKVILNNRVTSFDGELVTMKDGTTIRSRKVIWAAGILG 270
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL--PALAQVAER 246
+ PG R+ +++ +V +++V+A+GD + +E K P +AQVA +
Sbjct: 271 AIFEGFPAAAIGPGNRLVVNKHCQVLGMENVYALGDVA-LMEGDAKFPEGHPQVAQVAMQ 329
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKE 303
G+YL A S K + G P FVYR LGSMATIGR KA+VD
Sbjct: 330 MGEYL--------------AGSFKRKQQGKPIVPFVYRDLGSMATIGRNKAVVDF----- 370
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
G + GF +WLVW +L +++ RN+ V +NW +V
Sbjct: 371 -PGFKIQGFFAWLVWLFVHLYQLLGVRNKVMVFINWVWNYV 410
>gi|417102976|ref|ZP_11960901.1| NADH dehydrogenase protein [Rhizobium etli CNPAF512]
gi|327191444|gb|EGE58466.1| NADH dehydrogenase protein [Rhizobium etli CNPAF512]
Length = 421
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 168/336 (50%), Gaps = 26/336 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISEE 78
+ YD LV+A GA + FG + A L+ + A IRR++LL +++ P +
Sbjct: 96 LGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMETDPAV--- 152
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 136
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F
Sbjct: 153 -RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPAFA 211
Query: 137 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+ L YA L K GV + G S + T +P +VW+ GV S + L
Sbjct: 212 EELSAYAEKALEKLGVEIHLGKPVTECSADGVRIGETFIPSRTIVWAAGVTASPAARWLG 271
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+P GR+ ++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VPADRAGRVVVERDLSAPGLPDVFVIGDTAFVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ G A + PF Y H GS+ATIG+ A++D + K L G+++W
Sbjct: 331 --ARLSGKPAPA--------PFKYWHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA NW ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFTVAWNWLWIYLSGQHSARL 410
>gi|421099887|ref|ZP_15560530.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200901122]
gi|410797044|gb|EKR99160.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200901122]
Length = 422
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 175/333 (52%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLMTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D++ + + L +G + ++W+ GV +T+ +L +
Sbjct: 219 EFTKKRLESRGVEVLTGTRVIDINERGVQL-EGKMITTQTVIWAAGVQANTIASTLGVVL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRGGRVIVDEFCNIEGHSEVFVIGDIANYSKGIERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + F Y GSMATIGR A+ + L + G WL W
Sbjct: 334 ---GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQVGV------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|384417623|ref|YP_005626983.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353460538|gb|AEQ94817.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 324
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 164/317 (51%), Gaps = 24/317 (7%)
Query: 27 LVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHC 86
+++A GA + FG E+A L+ ++ A +RRKLLL ++ ++ L
Sbjct: 1 MLLATGATHAYFGNDQWAEHAPGLKTLYDALVLRRKLLLAFERAEAES-DPAARAAWLSF 59
Query: 87 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRLRHYAT 144
VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L A
Sbjct: 60 AVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPEDLTDNAR 119
Query: 145 TQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGG 203
TQL + GV + G V +D+ L D T VP +VW+ GV S L ++LD+P G
Sbjct: 120 TQLQRLGVEVHTGTPVTHIDAVGDQLGD-TFVPARTVVWAAGVAASPLARTLDVPLDRAG 178
Query: 204 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGG 263
R+ ++ L VP ++F GD + ++ G+ V P +A A++ GK++ + +
Sbjct: 179 RVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKHIAEAIRARHRG-- 234
Query: 264 GRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYL 323
+ F Y+ G++ATIGR A+V + + L L+G ++W W +A++
Sbjct: 235 ---------QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFWLAAHV 279
Query: 324 TRVVSWRNRFYVAVNWA 340
++ +RNRF V VNWA
Sbjct: 280 YFLIGFRNRFVVLVNWA 296
>gi|189211237|ref|XP_001941949.1| external NADH-ubiquinone oxidoreductase 2, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978042|gb|EDU44668.1| external NADH-ubiquinone oxidoreductase 2, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 534
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 163/352 (46%), Gaps = 80/352 (22%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F ++YDKL++ +G + TFG GVKE+A FL++V A++IR ++L + +P S E
Sbjct: 176 FDVNYDKLIVTVGCYSQTFGTPGVKEHAFFLKDVGDARKIRNRILACFEGAALPTTSVEM 235
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
K +LL+ VVGGGPTG+EFS EL D I D+R+ Y + Y ++T+ + A ++L FD +
Sbjct: 236 KKQLLNFAVVGGGPTGIEFSAELHDLINEDMRRLYPELIQYHNITVYDVAEKVLPMFDKK 295
Query: 139 LRHYATTQLSKSGVRLV---------------RGIVKDVDSQ---KLILNDGTEVPYGLL 180
L YA + + G+++ R DV + L + + E+ G+
Sbjct: 296 LADYAMQKFKREGIQIKTSHHVEELRPGAPAERSQPYDVGQEYLYTLKVKEEGEIGVGMC 355
Query: 181 VWSTGVGPSTLVKS-----------LDLPK--------SP------------GGRIGIDE 209
VWSTG+ + V S L +P SP G I D+
Sbjct: 356 VWSTGLMQNPFVASALSDVREAPTNLHIPSPTSDPATVSPSSVKWVVKKDAKSGSIITDD 415
Query: 210 WLRVPSV--------------------QDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
LRV V DVFA+GDC G +EST PA AQVA ++
Sbjct: 416 HLRVKLVPESSFSDSKDSKNASIEAIHPDVFALGDC-GIIESTS---YPATAQVASQKAF 471
Query: 250 YLFSLLNR------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
+L N+ I ++S F YR LG++A IG + AL
Sbjct: 472 WLAKRFNKADINSDIDPQPSPASSSLNPTTTTKGFTYRDLGTLAYIGNWNAL 523
>gi|338814456|ref|ZP_08626471.1| putative oxidoreductase [Acetonema longum DSM 6540]
gi|337273555|gb|EGO62177.1| putative oxidoreductase [Acetonema longum DSM 6540]
Length = 424
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 177/337 (52%), Gaps = 29/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD L++A G E + FG+ V +N+ L+++ + +R LL + ++ G ++ +
Sbjct: 95 LAYDYLILAAGGETNHFGMESVAKNSFGLKDIEDSIVVRNHLL---RMFELAGREQDPEV 151
Query: 82 R--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI---EANEILSSFD 136
R LL VV GGGPTGVE +G +S+ + + Y H+ D+ V +I A +L+
Sbjct: 152 RRALLTFVVAGGGPTGVESAGAISELVGLVLPPDYPHL-DFSQVRIILLEAAGRLLAGIP 210
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
DRL Y L V + + V + + +K+IL G E+ L+W+ GV + L ++
Sbjct: 211 DRLGDYTFRALQDKQVEVRLNTAVSEFNGEKIILKSGGEIATRTLIWAAGVRAAALANAV 270
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
D PK+ R+ + L +P+ +VFA+GD + Y E G+ LP +A VA +Q + +
Sbjct: 271 DSPKASLNRLVVTPALELPNHPEVFAIGDLA-YFEQQGRP-LPMVAPVAVQQASHAAQNI 328
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
R AG R PFVY+ G +ATIGR KA+ + + +GF +W
Sbjct: 329 MR-HLAGQDRL----------PFVYKTPGILATIGRNKAVAVMGR------WQFSGFFAW 371
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++W + ++ R++ + NR V+ +WA ++F + R+
Sbjct: 372 VLWLNVHILRLIGFHNRLSVSFSWAWEYLFYDRVVRL 408
>gi|425748572|ref|ZP_18866558.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii WC-348]
gi|425491032|gb|EKU57321.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii WC-348]
Length = 430
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 168/342 (49%), Gaps = 36/342 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K+ YD LVIA GA + FG + A L+ + A IR ++L E E+
Sbjct: 99 KLHYDTLVIATGATHAYFGHDEWERFAPGLKTLGDATNIRERIL--------AAFEEAER 150
Query: 81 SR-------LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YIHVTLIEAN-E 130
++ L V++GGGPTGVE SG +++ + +D R + D V LIEA
Sbjct: 151 TKDPILRKALQTFVIIGGGPTGVELSGTIAE-LAKDTLSRDFRLIDPRESRVVLIEAGPR 209
Query: 131 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 190
+LS F ++L Y L + GV +V G S+ ++ DG ++P ++W+ GV S
Sbjct: 210 LLSVFPEKLSSYTRQALEQLGVEVVLGTPVTSCSEDGVVYDGKQLPAKTIIWAAGVQASP 269
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ L++ GR+ +D L V ++F +GD + GK V P +A A++QGKY
Sbjct: 270 AARWLNVESDRAGRVVVDSNLTVTGHPEIFVIGDTAAVTMGDGKLV-PGIAPAAKQQGKY 328
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ ++ N K +L + F Y H G++ATIGR +A+VD+ + L
Sbjct: 329 VAKTID----------NRLKGKDLKESFKYYHQGNLATIGRSRAVVDMGK------FQLQ 372
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L+W W+ ++ ++ ++R VA++W G SR+
Sbjct: 373 GVLAWWFWKLIHIYFLIGVQSRLNVALSWLWNHSVGYRGSRL 414
>gi|78355689|ref|YP_387138.1| NADH dehydrogenase (ubiquinone) [Desulfovibrio alaskensis G20]
gi|78218094|gb|ABB37443.1| NADH dehydrogenase (ubiquinone) [Desulfovibrio alaskensis G20]
Length = 428
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 166/334 (49%), Gaps = 23/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I +DKLV+A+G+ + +G+ G ++ L+ + A +R ++ + + + K
Sbjct: 102 IPFDKLVVAMGSFTAFYGVPGADKHCFRLKNLEQAITLRNHIV-SCFEQATHERNPDRKD 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
R+L VVGGGPTGVE++G L++ I + + + + + V L+EA + +L+ F D L
Sbjct: 161 RILTYTVVGGGPTGVEYAGALAELIRQPLTKDFPTLNTGQARVVLLEAGDGLLAGFPDHL 220
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
R YA +L+ GV + + V V + L + + +VW+ GV L + LP
Sbjct: 221 RRYAFERLTHMGVDVRLNAKVTAVTPDSVELEGSSPLRTETVVWTAGVQGHALAGQMGLP 280
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GGR+ + L+V DVF GD + G + P +A A +QG + I
Sbjct: 281 TGRGGRVPVLPTLQVEGHPDVFVAGDMA---LPQGDSPAPLIAPNAIQQGALA---ADNI 334
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
A GR A F YR GSMATIGR A+V R KE + GF++W++W
Sbjct: 335 RAALAGRPLRA--------FRYRDKGSMATIGRAAAVV--RMGKEH---TATGFVAWVMW 381
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L +V +RNR +V WA ++F +RI
Sbjct: 382 LFIHLLYLVGFRNRLFVLFTWAWDYIFFERAARI 415
>gi|405378829|ref|ZP_11032740.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF142]
gi|397324639|gb|EJJ28993.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF142]
Length = 421
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 167/336 (49%), Gaps = 26/336 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISEE 78
++YD LV+A GA + FG + A L+ + A IRR++LL ++V P +
Sbjct: 96 LNYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFERAEVESDPAV--- 152
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFD 136
+ L +VG GPTG E +G +++ + + + ++ V LIEA +L +F
Sbjct: 153 -RDAFLTFSIVGAGPTGCELAGIIAELAHFTLPKEFRNIDTRKTRVVLIEAGPRVLPAFA 211
Query: 137 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+ L YA L K GV ++ G + + +P +VW+ GV S + L
Sbjct: 212 EDLSAYAQKALEKLGVEVLTGTPVTQCTADGVTVGENFIPSRTIVWAAGVQASHAARWLG 271
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+P GR +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VPADRAGRTIVEKDLTAPGLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVI- 329
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
RA + G PF Y H GS+ATIG+ A++D + K L G+L+W
Sbjct: 330 --------RARLSGKPAPG-PFKYWHQGSLATIGKSAAIIDFGRFK------LKGWLAWW 374
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA NW ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFTVAWNWFWIYMTGQHSARL 410
>gi|340521863|gb|EGR52097.1| predicted protein [Trichoderma reesei QM6a]
Length = 693
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 146/247 (59%), Gaps = 18/247 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL++++ A+ IR K++ NL ++ +P ++E
Sbjct: 265 RFYVPYDKLVIAVGSATNPHGVKGL-ENAFFLKDINDARMIRNKVIQNLEIACLPTTTDE 323
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + + +++ I V +I++ + IL+++D
Sbjct: 324 ERKRLLSFVVSGGGPTGVEFAAELFDLLNEDLTRHFPRLLRNEISVHIIQSRSHILNTYD 383
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTGVG 187
+ + YA + ++ V L VK+V K+I +DGT E+P G +WSTGV
Sbjct: 384 ETVSKYAEERFARDQVEVLTNSRVKEVQQDKIIFSQKQDDGTVVTKELPIGFCLWSTGVS 443
Query: 188 PST----LVKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
P+ L K L ++ + D LR+ + DV+A+GDC+ + +++ L
Sbjct: 444 PTALSQRLAKKLGASQTNRHALETDTHLRLNGAPLGDVYAIGDCATVQNNVADSIVSFLR 503
Query: 242 QVAERQG 248
++A +G
Sbjct: 504 KLAWSRG 510
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGR-ANSAKDMELG----DPFVYRHLGSMATI 289
T LPA AQ A +QG+YL N++ K AN +D +L F YRHLGS+A I
Sbjct: 576 TSLPATAQRAHQQGQYLAHKFNKLAKISDAMLANDIRDGDLDAAVYKAFEYRHLGSLAYI 635
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ DL +G S+AG L W V WRS Y + VS+R R +A++W +FGR
Sbjct: 636 GN-SAVFDL-----GEGWSMAGGL-WAVYAWRSVYFAQSVSFRTRSLMAMDWMKRGLFGR 688
Query: 348 DI 349
D+
Sbjct: 689 DL 690
>gi|398330939|ref|ZP_10515644.1| NADH dehydrogenase [Leptospira alexanderi serovar Manhao 3 str. L
60]
Length = 422
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 175/333 (52%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A +IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALKIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L +FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLMAFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D++ + + L +G +P ++W+ GV + + +L +
Sbjct: 219 EFTKKRLESRGVEVLTGTRVIDINERGVQL-EGKMIPTETVIWAAGVQANGIASTLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRGGRVIVDEFCNIEGHPEVFVIGDIANYSKDLERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + F Y GSMATIGR A+ + L + G WL W
Sbjct: 334 ---GDLKNKKR-----KSFRYIDKGSMATIGRTDAVAQVGV------LKMKGLFGWLAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKVTILLTWVWSYIAFRAEARV 412
>gi|190892486|ref|YP_001979028.1| NADH dehydrogenase [Rhizobium etli CIAT 652]
gi|190697765|gb|ACE91850.1| NADH dehydrogenase protein [Rhizobium etli CIAT 652]
Length = 421
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 169/338 (50%), Gaps = 26/338 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGIS 76
+ YD LV+A GA + FG + A L+ + A IRR++LL +++ P +
Sbjct: 94 MTLGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMETDPAV- 152
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSS 134
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +
Sbjct: 153 ---RDALLTFTIVGAGPTGVELAGIIAELAHITLPREFRNIDTRKTRVVLVEAGPRVLPT 209
Query: 135 FDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
F + L YA L K GV ++ G S + T V +VW+ GV S +
Sbjct: 210 FAEELSAYAQRALEKLGVEVLLGKPVTECSADGVRIGETFVASRTIVWAAGVTASPAARW 269
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
L +P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ +
Sbjct: 270 LGVPADRAGRVVVEKDLSAPDLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKV 328
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
+ + G A + PF Y H GS+ATIG+ A++D + K L G+++
Sbjct: 329 IR--ARLSGKSAPA--------PFKYWHQGSLATIGQSAAIIDFGRIK------LKGWIA 372
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W +W A++ ++ R+RF VA NW ++ G+ +R+
Sbjct: 373 WWIWGLAHIYFLIGTRSRFTVAWNWLWIYLSGQHSARL 410
>gi|424895869|ref|ZP_18319443.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393180096|gb|EJC80135.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 421
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 173/340 (50%), Gaps = 30/340 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL----MLSDVPGI 75
+ YD LV+A GA + FG + A L+ + A IRR++LL M SD P +
Sbjct: 94 MTLGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMESD-PAV 152
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 133
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L
Sbjct: 153 ----RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLP 208
Query: 134 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
+F + L YA L K GV + G V + + + + + T V +VW+ GV S
Sbjct: 209 TFAEELSAYAQKALEKLGVEIHLGRPVTECSADGVKIGE-TFVASRTIVWAAGVTASPAA 267
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
L +P GR+ +++ L P + DVF +GD + L GK V P +A A++QG Y+
Sbjct: 268 LWLGVPADRAGRVVVEKDLSAPGLPDVFVIGDTASVLREDGKPV-PGIAPAAKQQGGYVA 326
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+++ + G A + PF YRH GS+ATIG+ A++D + K L G+
Sbjct: 327 KVIH--ARLSGKPAPA--------PFRYRHQGSLATIGQSAAIIDFGRIK------LKGW 370
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 371 IAWWIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|421649690|ref|ZP_16090078.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii OIFC0162]
gi|445456005|ref|ZP_21445621.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii OIFC047]
gi|408513279|gb|EKK14908.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii OIFC0162]
gi|444778792|gb|ELX02798.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii OIFC047]
Length = 430
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 168/342 (49%), Gaps = 36/342 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K+ YD LVIA GA + FG + A L+ + A IR ++L E E+
Sbjct: 99 KLHYDTLVIATGATHAYFGHDEWERFAPGLKTLGDATNIRERIL--------AAFEEAER 150
Query: 81 SR-------LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YIHVTLIEAN-E 130
++ L V++GGGPTGVE SG +++ + +D R + D V LIEA
Sbjct: 151 TKDPILRKALQTFVIIGGGPTGVELSGTIAE-LAKDTLSRDFRLIDPRESRVVLIEAGPR 209
Query: 131 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 190
+LS F ++L Y L + GV +V S+ ++ DG ++P ++W+ GV S
Sbjct: 210 LLSVFPEKLSSYTRQALEQLGVEVVLRTPVTSCSEDGVVYDGKQLPAKTIIWAAGVQASP 269
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ L++ GR+ +D L V ++F +GD + GK V P +A A++QGKY
Sbjct: 270 AARWLNVESDRAGRVLVDSNLTVTGHPEIFVIGDTAAVTMEDGKLV-PGIAPAAKQQGKY 328
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ ++ N K ++ +PF Y H G++ATIGR +A+VD+ + L
Sbjct: 329 VAKTID----------NRLKGKDIKEPFKYHHQGNLATIGRSRAVVDMGK------FQLQ 372
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G L+W W+ ++ ++ ++R VA++W G SR+
Sbjct: 373 GVLAWWFWKLIHIYFLIGVQSRLNVALSWLWNHSVGYRGSRL 414
>gi|375336814|ref|ZP_09778158.1| NADH dehydrogenase, FAD-containing subunit [Succinivibrionaceae
bacterium WG-1]
Length = 458
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 169/343 (49%), Gaps = 44/343 (12%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
KI YD LVIA G + + +G ++E A ++ V A +R LL + S V S EK
Sbjct: 101 KIDYDYLVIASGTKTNFYGNKNIEEFAMPMKTVSEAMGLRNSLLTHFERS-VTCASGVEK 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NEIL 132
L+ V+VGGGP+GVE +G +++ +RY KDY +++TL++ N +L
Sbjct: 160 QESLNVVIVGGGPSGVEIAGAIAEM------RRYVLPKDYPDMNTSIMNITLVQGDNRLL 213
Query: 133 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
+ A L K V++ + +V D K+ +NDGT + L+W GV +
Sbjct: 214 PGMSQQSSAKALEFLKKMNVQIRLNTLVTDYKDNKVYMNDGTSIETRNLIWVGGVDCEPI 273
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL---PALAQVAERQG 248
V D G RI +D V ++++A+GD + +E+ + P +AQ A +QG
Sbjct: 274 VGIHDTQMGRGKRILVDGTNLVKDSKNIYAIGDIA-LMENVDEAFPKGHPQMAQPAIQQG 332
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESK 305
L A + K +E G P F Y+ LG MATIG+ KA+ ++
Sbjct: 333 ALL--------------AKNLKAIEQGKPTKEFKYKDLGCMATIGKNKAVAEIF------ 372
Query: 306 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 347
G+ GF +W++W +L ++ RN+F+V ++W + F + R
Sbjct: 373 GIKFGGFFAWILWMGVHLMSILGVRNKFFVFMDWVWSYFTYDR 415
>gi|82703122|ref|YP_412688.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrosospira multiformis ATCC 25196]
gi|82411187|gb|ABB75296.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrosospira multiformis ATCC 25196]
Length = 462
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 168/340 (49%), Gaps = 33/340 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LV+A G E + FGI ++ A ++ A EIR +L + + + E +
Sbjct: 129 ELAYDCLVLATGTEPNYFGIENIRRAALPMKTADDAIEIRNYMLQKMEEVTIE-VDEMRR 187
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE--------ANEIL 132
+L V+ GGGPTGVE +G L++ +R+R H +DY +T ++ A+ +L
Sbjct: 188 KKLFSVVIAGGGPTGVEIAGMLAE-----MRKRILH-RDYPELTGLQPRIHLVDSASALL 241
Query: 133 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
+ + Y L K GV + + VKD + +I +DG + +L+W+ GV
Sbjct: 242 GAMSVHSQKYTYEVLLKMGVEIHLNTQVKDYINDTVIFSDGKTLETQILLWTAGVTGKIF 301
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 250
G R+ ++E+ +V +D++A+GD C + P LAQVA +QG+
Sbjct: 302 EGLPHECYGRGNRLLVNEYNKVSGTRDIYAIGDTCLLTSDRNFPQGHPQLAQVALQQGRN 361
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
L + L + ++ L PF Y GS+A IGR KA+ D + L L
Sbjct: 362 LAANLVAV----------IRNQPL-TPFAYNDKGSLAIIGRNKAVADFPK----PALHLE 406
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
GF++W +W +L +V++RNRF NWA F F +D S
Sbjct: 407 GFMAWGIWLFVHLFSLVTYRNRFMTLANWAVAF-FTKDQS 445
>gi|149197833|ref|ZP_01874882.1| NADH dehydrogenase [Lentisphaera araneosa HTCC2155]
gi|149139054|gb|EDM27458.1| NADH dehydrogenase [Lentisphaera araneosa HTCC2155]
Length = 420
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 175/353 (49%), Gaps = 34/353 (9%)
Query: 4 HCETVTDELRTLEPWKFKI-------SYDKLVIALGAEASTFGIHGVKENATFLREVHHA 56
+ + V D + ++P K+ +D L++A GA S FG + ++ A L+ ++ A
Sbjct: 69 NIKVVMDYAKKIDPEDKKVICKAGEYDFDLLIMACGARHSYFGHNEWEKYAPGLKTINQA 128
Query: 57 QEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 116
EIRR++ + ++ ++ E S+ L V+VG GPTGVE +G + + + +S
Sbjct: 129 TEIRRRVFMAFEKAEKTE-NDLEMSKHLTFVIVGAGPTGVELAGAIGEMNRYTLGDEFSQ 187
Query: 117 VK-DYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT 173
+ V LIEA IL++FD+ A + L K GV + G V +D Q + L D T
Sbjct: 188 LDVSKTRVLLIEAGPRILAAFDEDQSQRAQSDLVKLGVDVRLGQAVTHIDDQCVKLGDET 247
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG 233
+ ++W+ GV S L KSL + GR+ I+E L + +F GD + + G
Sbjct: 248 -IQTSTVLWAAGVEASRLGKSLPVELDRAGRVPIEEDLSMKQFPYIFVAGDQANFTGKDG 306
Query: 234 KTVLPALAQVAERQGKYLFSLL--NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGR 291
+ LP +A VA +QG+YL LL GK GG F Y G MATIGR
Sbjct: 307 RP-LPGMAPVAMQQGRYLAKLLVAREKGKDIGG-------------FKYVDKGKMATIGR 352
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
A+ ++ + L GF++WL W ++ + ++NRF+V V W +++
Sbjct: 353 SSAIA------QAGKIKLEGFIAWLAWLFIHILYLSGFKNRFFVFVQWTWSYL 399
>gi|14231|emb|CAA43787.1| NADH dehydrogenase (ubiquinone) [Saccharomyces cerevisiae]
Length = 513
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 180/352 (51%), Gaps = 31/352 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD L+ A+GAE +TFGI GV + F +E+ ++ E+RR N +++ + E+
Sbjct: 166 EIKYDYLISAVGAEPNTFGIPGVTDYGHFTKEIPNSLEMRRTFAANTEKANLLPKGDPER 225
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRL 139
R VVVGGGPTGVE +GE D++ +D R+ + + + + L+EA I L+ F+ +
Sbjct: 226 RRTTSIVVVGGGPTGVEAAGETQDYVHQDTRKFTPALAEEVQIHLVEATPIVLNMFEKKT 285
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGVGPST 190
YA + L + +++ R V V+ ++L+ E +PYG L+W+TG
Sbjct: 286 SSYAQSHLENTSIKVHTRTAVAKVEEKQLLAKTKHEDGKMTEETIPYGTLIWATGNKARP 345
Query: 191 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
++ +P+ + G ++++L+V ++FA+GD + LP AQVA +
Sbjct: 346 VITDTFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQVAHQ 398
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYKALVD 297
+ +YL +++ + + N++ + D PF Y LG++A G +A+
Sbjct: 399 EAEYLAKNFDKMAQMPNFQKNTSSRKDKIDTLFEENNFKPFKYNDLGALAYTGSERAIAT 458
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+R K + + G +++ +WR YL+ + S R+R V +W F RD
Sbjct: 459 MRSGKRT-FYTGGGLMTFYLWRILYLSMITSARSRLKVFFDWIKLAFFKRDF 509
>gi|361131028|gb|EHL02758.1| putative NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial
[Glarea lozoyensis 74030]
Length = 511
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 150/259 (57%), Gaps = 25/259 (9%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K ++SYD LV+++GAE +TFGI GVKE++ FL+E+ AQ+IR+K++ + + S E
Sbjct: 218 KTEVSYDMLVVSVGAENATFGIPGVKEHSCFLKEIGDAQQIRKKIMDCVETATFKDQSPE 277
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 137
E RLLH VVVGGGPTGVEF+GEL DF +D+++ + D VTLIEA +L F
Sbjct: 278 EVERLLHMVVVGGGPTGVEFAGELQDFFDQDIKKWVPEISDKFKVTLIEALPNVLPMFSK 337
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DG---TEV-PYGLLVWSTGVGP 188
+L Y + + + + + VK V + + DG TEV PYGLLVW+TG
Sbjct: 338 QLIDYTESTFKEEKITIKTKTAVKKVTDKTVEAEATGPDGKKTTEVMPYGLLVWATGNAV 397
Query: 189 STLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPALAQ 242
+VK L +P R G ++E+L V +D++A GDC +GY + AQ
Sbjct: 398 RPVVKDLMSQIPAQKDSRRGLAVNEYLVVQGTKDIWATGDCAVAGYAPT---------AQ 448
Query: 243 VAERQGKYLFSLLNRIGKA 261
VA ++G +L L N + K+
Sbjct: 449 VASQEGAFLARLFNTMAKS 467
>gi|217978753|ref|YP_002362900.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Methylocella silvestris BL2]
gi|217504129|gb|ACK51538.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Methylocella silvestris BL2]
Length = 427
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 167/336 (49%), Gaps = 26/336 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+A GA + FG + A L+ + A IRR++LL ++ E +
Sbjct: 100 VAYDTLVLATGARHAYFGHDEWEPYAPGLKTLEDATTIRRRMLLAFERAE----RETDPD 155
Query: 82 RL---LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 136
RL L V++G GPTGVE +G +++ ++ + + H+ + LIEA IL F
Sbjct: 156 RLAALLTFVIIGAGPTGVELAGTIAELAHENIVEDFRHIDTRKARIVLIEAGPRILPGFT 215
Query: 137 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+ L YAT L K GV + G S ++ G ++P ++W+ GV S + L
Sbjct: 216 EDLSAYATRALEKLGVEVKVGAPVSECSADGVVFGGVKLPARTILWAAGVQASRAAQWLG 275
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ ++ L VP +FA+GD G+ V P +A A+++G Y+ S++
Sbjct: 276 AAADRVGRLLVEPDLSVPGHPQIFAIGDTVSITGPDGQPV-PGIAPAAKQEGTYVASVIK 334
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ G A + PF Y+H+GS+ATIG+ A+ D L + G L+W
Sbjct: 335 --ARLAGKPAPA--------PFHYKHVGSLATIGKRAAIADF------GWLKVRGALAWW 378
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W ++ ++ +RNR VA++W ++ G +R+
Sbjct: 379 LWGFIHIYFLIGFRNRLGVALSWLWAYLLGHRSARL 414
>gi|433679660|ref|ZP_20511368.1| NADH dehydrogenase [Xanthomonas translucens pv. translucens DSM
18974]
gi|430815229|emb|CCP41967.1| NADH dehydrogenase [Xanthomonas translucens pv. translucens DSM
18974]
Length = 435
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 173/337 (51%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG +A L+ + A +RR LLL ++ ++
Sbjct: 99 LDYDYLLVATGATHAYFGHDEWARHAPGLKTLDDALHLRRHLLLAFERAEAES-DPAARA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
L +VGGGPTGVE +G L++ ++ + + V LIEA +L+SF +RL
Sbjct: 158 AWLSFAIVGGGPTGVELAGTLAEIARHTLKHEFRRIDPAQAKVRLIEAGPRVLASFPERL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G+ V D+D+ L T VP +VW+ GV S L ++LD+P
Sbjct: 218 SAKAQKQLEKLGVDVLTGVPVADIDASGYRLGS-TFVPARTVVWAAGVAASPLGRTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L +P +VF GD + ++ GK V P +A A++ G+++
Sbjct: 277 LDRSGRVQVQPDLSIPGHPEVFVAGDLAALQQADGKPV-PGVAPAAKQMGRHVAE----- 330
Query: 259 GKAGGGRANSAKDM--ELGD-PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N AK + E GD PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 331 --------NLAKRLRGEPGDAPFRYADYGNLATIGRMAAIVHLGR------LQLSGLLAW 376
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W +A++ ++ +RNR V +NWA + + +RI
Sbjct: 377 WFWLAAHVFFLIGFRNRLVVLLNWAWAYWSYQRAARI 413
>gi|374998861|ref|YP_004974360.1| NADH dehydrogenase FAD-containing subunit [Azospirillum lipoferum
4B]
gi|357426286|emb|CBS89186.1| NADH dehydrogenase FAD-containing subunit [Azospirillum lipoferum
4B]
Length = 473
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 167/327 (51%), Gaps = 34/327 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD+LVIA G+ S FG A ++ + AQ IR +LL +++ EE++
Sbjct: 113 IRYDRLVIATGSSYSYFGHDEWAAVAPGIKTIEDAQHIRARLLGCFERAEL-STDPEEQA 171
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEANE-ILS 133
L+ V+VGGGPTGVE +G +++ RY+ +D+ + L+EA +L
Sbjct: 172 MLMTVVIVGGGPTGVELAGAVAELT------RYALARDFRRIDPRSARILLVEAGPRLLG 225
Query: 134 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
+F + L YA L GV ++ G V+++++ + + G +P G +VW GV S
Sbjct: 226 TFPEHLSRYAQHALGWLGVTVMTGQAVENIEAGGVTIG-GRFIPAGTMVWGAGVAASPAG 284
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
+ L + GRI +D L VP + VFA+GD + GK LP LAQVA++QG++L
Sbjct: 285 RWLGVETDRAGRIRVDADLSVPGLDGVFALGDTALGAADDGKP-LPGLAQVAKQQGQHLG 343
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+ L AN + + PF +++ G+ A +GR A+ D + L G+
Sbjct: 344 TALA---------ANILRGKPM-PPFRFKNRGNTAIVGRSAAVFDFGTRQ------LKGW 387
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNW 339
L+W++W ++ +V + R V++ W
Sbjct: 388 LAWILWAVVHVYLLVGFEKRLLVSMQW 414
>gi|444916942|ref|ZP_21237050.1| NADH dehydrogenase [Cystobacter fuscus DSM 2262]
gi|444711588|gb|ELW52527.1| NADH dehydrogenase [Cystobacter fuscus DSM 2262]
Length = 458
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 173/342 (50%), Gaps = 36/342 (10%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+A GA S F A L+ ++ A IR ++LL+L ++ E +
Sbjct: 103 EVPYDTLVLATGATHSYFNHPEWAHVAPGLKTLNDAVAIRERVLLSLEAAERE-TDPERQ 161
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDDR 138
+ L V++GGGPTGVE +G +S + + + + + V L+E +L+ + +
Sbjct: 162 AEWLTFVIIGGGPTGVELAGAISYMLRHSLPRDFRRIDTAKARVLLLEGLPRVLTQYPEE 221
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L A L K GV + G +V VD + + + + +P ++W GV S LV+SLD+
Sbjct: 222 LSATARKDLEKLGVEVHTGSMVTGVDERGVSVGE-QRIPARTVLWGAGVAASKLVRSLDV 280
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P GR+ +D L VP +D+F +GD + ++ GK V P +A A + G+++
Sbjct: 281 PLDKAGRVKVDPTLTVPGHEDIFVLGDVASLVQD-GKPV-PGIAPAAMQMGRHV------ 332
Query: 258 IGKAGGGRANSAKDMELG------DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
AK++ L PF Y GS A IGR A V L NK L ++G
Sbjct: 333 -----------AKNIRLRLEGKPLRPFHYVDKGSFAVIGRGYA-VGLVFNK----LKMSG 376
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF-GRDISRI 352
L+WL+W ++ +V +RNR V +NWA TF+ GRD+ I
Sbjct: 377 PLAWLMWAGIHIAYLVGFRNRLAVMLNWAFTFLTRGRDVRLI 418
>gi|406576155|ref|ZP_11051822.1| NADH dehydrogenase [Janibacter hoylei PVAS-1]
gi|404554434|gb|EKA59969.1| NADH dehydrogenase [Janibacter hoylei PVAS-1]
Length = 456
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 42/336 (12%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A GA S FG A ++++ +A E+R ++ L++ E++ RL
Sbjct: 105 YDSLIVAAGAGQSYFGNDHFARYAPGMKDIDNALELRGRIFGAFELAET-STDPEDRERL 163
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ + + + H+ +D + L A ++L SF DRL
Sbjct: 164 LTFVVVGAGPTGVEMAGQIAELSHKTLAHEFRHINPRDARVILLDGAPQVLPSFGDRLGG 223
Query: 142 YATTQLSKSGVRLVRG-IVKDVDSQKLILND--GT--EVPYGLLVWSTGVGPSTLVKSLD 196
L K GV + G +V +VD + + D GT + VW+ GV S L K +
Sbjct: 224 KTRASLEKRGVEVQLGAMVTEVDGTGIEVKDKDGTVRRIEAMTKVWAAGVAASPLGKMIA 283
Query: 197 LPKSP----GGRIGIDEWLRVPSVQDVFAVGDC---SGYLESTGKTVLPALAQVAERQGK 249
GR+ ++E L V ++F VGD GY P +AQ+A + G+
Sbjct: 284 DQAGAEVDRAGRVHVEEDLTVKGHPEIFLVGDMINLKGY---------PGVAQLAIQGGR 334
Query: 250 YLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
Y +L R+ + E PFVY+ GSMATI +Y A+ + + +
Sbjct: 335 YAAKEILGRL-----------EGKEPQAPFVYKDKGSMATISKYSAVASIGK------IK 377
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L GF++WL W + +L +V ++NR +NW TFV
Sbjct: 378 LTGFIAWLAWLAVHLMAMVGFKNRISTLLNWIITFV 413
>gi|354604988|ref|ZP_09022977.1| hypothetical protein HMPREF9450_01892 [Alistipes indistinctus YIT
12060]
gi|353347567|gb|EHB91843.1| hypothetical protein HMPREF9450_01892 [Alistipes indistinctus YIT
12060]
Length = 430
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 22/345 (6%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
V E LE ++YD LVIA G + FG+ +++ + + ++ A IR +L NL
Sbjct: 89 VKPEENLLETSTGSVTYDYLVIATGCVPNFFGMDHIEQRSWPMSDIGDALRIRNSVLRNL 148
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLI 126
+ V SEEE++ LL+ V+VGGG +GVE +G L++ V + Y V +H+ L+
Sbjct: 149 EKA-VIATSEEERNALLNIVIVGGGASGVEIAGALAEMRSYIVPRDYPGVNISSMHIYLV 207
Query: 127 EA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWST 184
E +++L++ L K GV ++ VKD ++I DGT + G L+W++
Sbjct: 208 EGRDKLLATMSPETSSDCLKVLEKKGVNVMLNTAVKDYQDNRVIFGDGTSILSGNLIWTS 267
Query: 185 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
GV + + K GRI D + RV ++FA+GD + + P LA+VA
Sbjct: 268 GVKSEAVEGIGNSEKERRGRILTDRYNRVQGFDNIFAIGDIAITDDPQYPAGYPQLARVA 327
Query: 245 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 304
QG+ + + L + K K ME P+ YR +G +AT+GR +A E
Sbjct: 328 ISQGERIAANLIAVSK--------GKPME---PYEYRSIGVLATVGRNRAFA------EW 370
Query: 305 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+ GF++WL W ++ ++ +N+ V W + FG+D+
Sbjct: 371 GKFRIKGFMAWLAWCFVHILFLLGVQNKIKVFSGWVWNY-FGKDL 414
>gi|453080215|gb|EMF08266.1| FAD/NAD(P)-binding domain-containing protein [Mycosphaerella
populorum SO2202]
Length = 429
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 177/343 (51%), Gaps = 36/343 (10%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F ++YDKLVIA G TFG G E+A FLR + A+ I++++L L + VPG+++ +
Sbjct: 110 FTVNYDKLVIAPGCINQTFGTPGALEHANFLRTTNDARLIQQRILEMLDAASVPGLTDAQ 169
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ +L ++VGGGP G+E + EL D D++ Y+H++ + + + A ++L SF+ +
Sbjct: 170 QRDILRIIIVGGGPIGIEAAAELFDLWNDDMKYLYAHLQGKFSIEIHDVAEKLLGSFEGK 229
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA +L K G+ + ++ V++ + + ++ YGLL+W+TG G + LV+ L+
Sbjct: 230 LGEYAEDKLKKRGIEIQTESHIEKVEADAIYTKELGQIRYGLLLWATGNGANPLVEKLES 289
Query: 198 PKSPGG--RIGIDEWLRV------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
K RI D+ LRV +++VFA+GD + LP LA+VA ++ +
Sbjct: 290 VKKTDKLPRILTDKRLRVLQKENDQVMENVFALGDSA----DIDGNFLPMLAEVAVQKAE 345
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+L LN G E PF Y+ S+A +G + D +S
Sbjct: 346 WLTKALNDDGG------------ESPKPFEYKQKASLAYLGGQDGVADGEWTGQS----- 388
Query: 310 AGFLSWLVWRSAYLTR-VVSWRNRFYVAVNWATTFVFGRDISR 351
+WL WRS + SWR + ++W V GRDI+R
Sbjct: 389 ----AWLAWRSGSIWHWPRSWRRTLMIGISWIFNVVGGRDIAR 427
>gi|310814963|ref|YP_003962927.1| NADH dehydrogenase protein [Ketogulonicigenium vulgare Y25]
gi|385232518|ref|YP_005793860.1| NADH dehydrogenase transmembrane protein [Ketogulonicigenium
vulgare WSH-001]
gi|308753698|gb|ADO41627.1| NADH dehydrogenase protein [Ketogulonicigenium vulgare Y25]
gi|343461429|gb|AEM39864.1| putative NADH dehydrogenase transmembrane protein
[Ketogulonicigenium vulgare WSH-001]
Length = 420
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 171/336 (50%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+A GA + FG + +A L+ + A IRR+LLL +++ E+
Sbjct: 94 RVPYDTLVLATGARHAYFGRDEWEADAPGLKTLEDATTIRRRLLLAFERAEL-TTDPAER 152
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
LL ++G GPTGVE +G +++ R + + + + D + LIEA IL +F
Sbjct: 153 EALLTFAIIGAGPTGVELAGIIAELAHRILPREFRRIDTDRARIMLIEAGPRILPAFSPN 212
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-D 196
L YA L K GV ++ G V + + ++L D + ++W+ GV S L
Sbjct: 213 LSDYAAQSLQKVGVEVLTGKPVTQISDKGIVLGD-EPIAARTVIWAAGVQASRAKDWLGG 271
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ GR+ + L + D+F +GD + ++ES GK V P +A A++QG+Y L+
Sbjct: 272 VEADRAGRVMVQPDLTLAGAPDIFVLGDTA-HVESDGKPV-PGVAPAAKQQGEYAAKLIR 329
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ + PF Y+H+G++ATIGR A+++ + + G+L+W
Sbjct: 330 ----------TRLEGKDAPAPFKYKHMGNLATIGRNSAVIEFGK------FQMRGWLAWW 373
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+R V ++W F+ G++ +R+
Sbjct: 374 IWGFAHIYFLIGTRSRIVVLLSWLWIFISGQNSARL 409
>gi|21673208|ref|NP_661273.1| NADH dehydrogenase [Chlorobium tepidum TLS]
gi|21646290|gb|AAM71615.1| NADH dehydrogenase [Chlorobium tepidum TLS]
Length = 430
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 172/330 (52%), Gaps = 26/330 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA+ FG + +E+A L+ + A EIRR+++ ++ +E K
Sbjct: 95 IEYDYLVLACGAQHHYFGKNDWEEHAPGLKNLAQASEIRRRVMEAYEAAERTNDMKERKK 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDRL 139
+L V+VGGGPTGVE +G + + + + Y H+ + + ++EA E IL +F L
Sbjct: 155 QLTF-VIVGGGPTGVELAGSIGEMSRYTLSKFYRHIDPKLTRIFIVEAAERILGTFSPEL 213
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVKSLDL 197
AT +L K GV++ +V DVD+ + + G E + ++W+ GV S + +++ +
Sbjct: 214 SSKATRELEKLGVQVWTSSMVSDVDADGVQI--GRERIEAATVLWAAGVKASEIGQNMGV 271
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GRI ++ L +P +VF GD + Y G T LP +A VA ++GK + ++
Sbjct: 272 QTDRSGRIMVEADLSLPGHPEVFVGGDQACYTLENGST-LPGMAPVAMQEGKAIGRMILD 330
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
K G+ PF YR G MATIGR +A+V++ L G ++W
Sbjct: 331 DLK---GKPRK--------PFKYRDKGQMATIGRNRAIVEI------GNLKFDGAIAWFT 373
Query: 318 WRSAYLTRVVSWRNRFYVAVNWA-TTFVFG 346
W ++ + ++++R +V + WA + F FG
Sbjct: 374 WLLVHIYYLSTFKHRVFVLMQWAWSYFTFG 403
>gi|124002561|ref|ZP_01687414.1| NADH dehydrogenase [Microscilla marina ATCC 23134]
gi|123992390|gb|EAY31758.1| NADH dehydrogenase [Microscilla marina ATCC 23134]
Length = 453
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 175/347 (50%), Gaps = 50/347 (14%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN----LMLSDVPGISE 77
+ YD LVIA GA + +G+ + ++A L+E+ + +R K++ N L+ +D
Sbjct: 108 VKYDHLVIATGATTNYYGMQDIAQHAVPLKEIQDSILLRNKIIKNFENALLTAD-----H 162
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-------- 129
E+++ + V+VGGGPTGVE +G L++ +++ KDY + L+E +
Sbjct: 163 EKRNSYMDYVIVGGGPTGVEVAGALAEL------KKHVFPKDYRELNLMEMDIHLVEAGP 216
Query: 130 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188
+L + ++ A L K GV++ + VK D ++ L E+ LVW+ GV
Sbjct: 217 RLLGAMSEKSGAKAQQFLEKMGVKVHLNTSVKSYDGYRVTLGSDEELITKTLVWAAGVKG 276
Query: 189 STL----VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
+ + V+S+ G R+ ++ + +V +++AVGD + ++ P +A A
Sbjct: 277 APIDGIRVESM----VGGNRLKVNHFNQVEGYDNIYAVGDIAAMIDDDNPKGHPMMAPPA 332
Query: 245 ERQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303
+QG++L +LLN+ KD + PF Y GSMATIGR KA+V++
Sbjct: 333 MQQGRHLAKNLLNKY----------EKDRPM-KPFKYFDKGSMATIGRNKAVVEM----- 376
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
G GF +WL+W +L +V +RNR V +NW ++ F D S
Sbjct: 377 PNGSKTQGFFAWLIWMFIHLMYLVGFRNRLLVLINWVMSY-FSYDKS 422
>gi|222526844|ref|YP_002571315.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chloroflexus sp. Y-400-fl]
gi|222450723|gb|ACM54989.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chloroflexus sp. Y-400-fl]
Length = 446
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 170/337 (50%), Gaps = 24/337 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ YD L++A G+ + FG + + +++++ AQ +R +LL + +++
Sbjct: 107 SVQYDYLILAAGSTTNFFGNERIARHTLGMKDLNEAQRLRNHVLLCCERAAAES-DPDKR 165
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFDDR 138
LL VVGGGPTGVE +G + I +R Y + V LIEA + IL+SF D
Sbjct: 166 MALLTFAVVGGGPTGVELAGAFVELIRHVIRHDYPMLDVRQARVVLIEATDRILASFPDS 225
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L+ A +L + GV + + V D D+ L DG+ + +VW+ GV + L +L +
Sbjct: 226 LQQAALHRLQRMGVEVRLNTPVADADTNGLRFRDGSSLAAKTVVWAAGVRGAPLADALGV 285
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-LPALAQVAERQGKYLFSLLN 256
G R+ + L +P VF +GD + YLE V P +A VA + G+ + N
Sbjct: 286 TLGRGARVVVTPQLTLPDDDRVFVIGDMA-YLEGYRPGVAYPMVAPVAIQMGEQ--AARN 342
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ + G + M+ PF Y G MATIGR A++D + G+ L+G+L+W+
Sbjct: 343 ILAQIDG------RPMQ---PFQYHDKGQMATIGRSAAVLD------AFGVRLSGWLAWV 387
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
W +L +V +RNR V +NWA + F + R + I
Sbjct: 388 GWLFVHLMALVGFRNRALVLLNWAYSYFTYDRGVRLI 424
>gi|297836846|ref|XP_002886305.1| NDB4 H dehydrogenase B4 [Arabidopsis lyrata subsp. lyrata]
gi|297332145|gb|EFH62564.1| NDB4 H dehydrogenase B4 [Arabidopsis lyrata subsp. lyrata]
Length = 581
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 143/235 (60%), Gaps = 12/235 (5%)
Query: 2 KVHCETVTDELRTLE-PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
K+HC + E +L+ +F + YD LVIA+GA+ +TF GV+E+A FL+E A IR
Sbjct: 145 KLHCRS--KEGSSLKGTTEFDMDYDILVIAVGAKPNTFNTPGVEEHAYFLKEAEDALNIR 202
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
++ + +P ++EEE+ ++LH VVVGGGPTGVEFS EL DF+++DV + Y V+++
Sbjct: 203 HSVIDCFERASLPNLTEEERKKILHFVVVGGGPTGVEFSAELHDFLVQDVAKIYPKVQEF 262
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKD-VDSQKLILNDGT 173
+TL+EA + IL+ FD R+ +A + + G+ L V G+ D + +++
Sbjct: 263 TRITLLEAGDHILNMFDKRITAFAEEKFQRDGIDLKTGSMVVGVTADEISTKERETGKIV 322
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
PYG++VWSTG+G +++ G R + DEWLRV +DV+A+GD +
Sbjct: 323 SEPYGMVVWSTGIGSRPVIRDFMQQIGQGQRRVLATDEWLRVEGCEDVYALGDTA 377
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAG----GGRANSAKDMELGDPFVYRHLGSMATIGRY 292
LPA AQVA +QGKYL N++ K G + PF YRH GS A +G
Sbjct: 467 LPATAQVASQQGKYLAKCFNKMEKCERKPEGPLRFRGEGRHRFQPFRYRHFGSFAPLGGE 526
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ +L + S G S WL W S Y +++VSWR R V +W FVFGRD S I
Sbjct: 527 QTAAELPGDWVSIGHSS----QWL-WYSVYASKLVSWRTRMLVISDWTRRFVFGRDSSSI 581
>gi|226366452|ref|YP_002784235.1| NADH dehydrogenase [Rhodococcus opacus B4]
gi|226244942|dbj|BAH55290.1| NADH dehydrogenase [Rhodococcus opacus B4]
Length = 464
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 169/334 (50%), Gaps = 36/334 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A GA S FG E A ++ + A E+R ++L +++ E++RL
Sbjct: 108 YDSLIVAAGAGQSYFGNDHFSEFAPGMKTIDDALELRGRILGAFEQAELSS-DPAERARL 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G++++ R + + ++ ++ + L A+++L + +L
Sbjct: 167 LTFVVVGAGPTGVELAGQIAELSRRTLSGAFRNIDPREARVILLDGADDVLPVYGGKLSR 226
Query: 142 YATTQLSKSGVRLVRG-IVKDVDSQKLIL--NDGTE--VPYGLLVWSTGVGPSTLVKSL- 195
A QL K GV + G +V DVD L++ DGT + VWS GV S L K +
Sbjct: 227 KARQQLEKLGVEIQLGAMVTDVDVDGLVVKDKDGTHRRIESQCKVWSAGVQASPLGKQIA 286
Query: 196 ---DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
D GR+ ++ L VP DVF +GD + S K LP LAQVA + GKY
Sbjct: 287 DQSDAEIDRAGRVMVNPDLSVPGHPDVFVIGD----MMSLDK--LPGLAQVAMQGGKYAA 340
Query: 253 SLLNRIGKAG--GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ KAG GG+ PF Y GSMATI R+ A+ + + L ++
Sbjct: 341 KQI----KAGLNGGKPEDRP------PFKYFDKGSMATISRFSAVAKVGK------LEIS 384
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GF+ W+ W + +L +V +R+R ++W TF+
Sbjct: 385 GFIGWVAWLAIHLMYLVGFRSRLSTLLSWTVTFL 418
>gi|163848888|ref|YP_001636932.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chloroflexus aurantiacus J-10-fl]
gi|163670177|gb|ABY36543.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chloroflexus aurantiacus J-10-fl]
Length = 455
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 170/337 (50%), Gaps = 24/337 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ YD L++A G+ + FG + + +++++ AQ +R +LL + +++
Sbjct: 116 SVQYDYLILAAGSTTNFFGNERIARHTLGMKDLNEAQRLRNHVLLCCERAAAES-DPDKR 174
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFDDR 138
LL VVGGGPTGVE +G + I +R Y + V LIEA + IL+SF D
Sbjct: 175 MALLTFAVVGGGPTGVELAGAFVELIRHVIRHDYPMLDVRQARVVLIEATDRILASFPDS 234
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L+ A +L + GV + + V D D+ L DG+ + +VW+ GV + L +L +
Sbjct: 235 LQQAALHRLQRMGVEVRLNTPVADADTNGLRFRDGSSLAAKTVVWAAGVRGAPLADALGV 294
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-LPALAQVAERQGKYLFSLLN 256
G R+ + L +P VF +GD + YLE V P +A VA + G+ + N
Sbjct: 295 TLGRGARVVVTPQLTLPDDDRVFVIGDMA-YLEGYRPGVAYPMVAPVAIQMGEQ--AARN 351
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ + G + M+ PF Y G MATIGR A++D + G+ L+G+L+W+
Sbjct: 352 ILAQIDG------RPMQ---PFQYHDKGQMATIGRSAAVLD------AFGVRLSGWLAWV 396
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 352
W +L +V +RNR V +NWA + F + R + I
Sbjct: 397 GWLFVHLMALVGFRNRALVLLNWAYSYFTYDRGVRLI 433
>gi|404448591|ref|ZP_11013584.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Indibacter alkaliphilus LW1]
gi|403766212|gb|EJZ27087.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Indibacter alkaliphilus LW1]
Length = 448
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 174/340 (51%), Gaps = 21/340 (6%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
V E + LE ++SYD L+++ GA + FG ++ +A ++ A IR K++ N
Sbjct: 96 VDREKKILETNLGQLSYDILILSQGANTNFFGNKNIQRHAAPMKTTSEALYIRNKIISNY 155
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLI 126
+ G + EE+ +++ V+VGGG TGVE +G +++ + + Y + + + V LI
Sbjct: 156 ERAVNLG-NIEERRPIMNVVIVGGGATGVELAGAIAELRNQVFPKDYPQLSFENMRVILI 214
Query: 127 EAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWST 184
EA +L+ + + A + L K GV ++ G +V+D D + L D + L+W+
Sbjct: 215 EAGPSLLAGLSENSQQKAQSYLKKLGVEVMLGTMVEDFDGYTVTLKDKEPIKTITLLWAA 274
Query: 185 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
GV ++L+ D+ + GR+ +D++ ++ + ++ +GD E P +AQVA
Sbjct: 275 GVKANSLLGIADVQMAKNGRLLVDQFNKLLNDDSIYVLGDQCLQEEEEFPNGHPQVAQVA 334
Query: 245 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 304
+Q K L L R K+ E PF YR LGSMAT+G+ A+VDL
Sbjct: 335 IQQAKNLAVNLKR----------DLKNQEW-KPFRYRDLGSMATVGKKMAVVDL------ 377
Query: 305 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+S G +WLVW +L ++ +N+ + +NWA ++
Sbjct: 378 PFISFQGIFAWLVWLFVHLMAILGVKNKLIIFINWAWKYL 417
>gi|284044300|ref|YP_003394640.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Conexibacter woesei DSM 14684]
gi|283948521|gb|ADB51265.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Conexibacter woesei DSM 14684]
Length = 451
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 170/344 (49%), Gaps = 24/344 (6%)
Query: 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 73
+L+ + ++ YD+LV+ALG+ + T I G+ E+A + + A +R +++ L +++
Sbjct: 92 SLDGRRHELHYDQLVVALGSISRTLPIPGLAEHAVGFKTLSEAIALRNRVITMLEIAETV 151
Query: 74 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEI 131
E+++ L V VG G G+E EL DF+ DV Y + + L+EA + +
Sbjct: 152 H-DAEQRAEFLTFVFVGAGYAGLEGIAELQDFVT-DVIDLYPRCRVQGVRFMLVEARDRV 209
Query: 132 LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 190
+ RL +A +L G+ + V+ +D + + L G VP + W+ GV P
Sbjct: 210 MPEVAPRLADFAQRELRGRGIEIRTNTTVEALDERSVTLKGGEVVPARTVAWTAGVKPHP 269
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL-PALAQVAERQGK 249
+V L LP GGRI +D+ +RV DV+A+GD + + K L P AQ A RQG+
Sbjct: 270 VVARLGLPLERGGRIEVDQTMRVRGHDDVWAIGDAAAIPDPARKGELSPPTAQHAIRQGR 329
Query: 250 YLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+ ++ +G GGR PF Y+ G +GR++A+ + G+
Sbjct: 330 RVARNVAAELG--AGGRVR---------PFTYKTKGVFVDMGRHQAVAS------TMGIR 372
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
GF +W + R+ +L + W + + V+W + +F RD S +
Sbjct: 373 WRGFPAWFLARTYHLANMPGWHRKSRLVVDWTVSLLFPRDTSEL 416
>gi|432341955|ref|ZP_19591272.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430773037|gb|ELB88748.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 461
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 160/332 (48%), Gaps = 29/332 (8%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD LV++ GA S FG E+A ++ + A E+R ++L ++V E++RL
Sbjct: 107 YDSLVVSAGARQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFESAEV-STDPAERARL 165
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +GE++ R + Y + +D + L A +L FDD+LR
Sbjct: 166 LTFVVVGAGPTGVEMAGEIAQLAHRTLAGAYRTIDPRDARIILLDAAPTVLPPFDDKLRR 225
Query: 142 YATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLVKSL-- 195
A L GV + G +V DVD L + D + +WS GV S L + L
Sbjct: 226 AAADTLEDLGVEIQLGAMVTDVDDDGLTVRDQDGERRIEAACKIWSAGVAASPLGRQLAE 285
Query: 196 --DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
GR+ ++ L +P +VF VGD + LP +AQVA + G+Y
Sbjct: 286 QTGADTDRAGRVLVEPDLTLPGHSNVFVVGDM------MNRDGLPGVAQVAIQGGRYAAQ 339
Query: 254 LLNRIGKAGGGRAN-SAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
L+ A RA+ +D PF Y GSMA I R+ A+ + + L L G
Sbjct: 340 LI-----AAEVRAHRKGRDKPERAPFRYTDKGSMAMISRFHAVAKVGR------LQLTGL 388
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+WL W +L +V +++R A++W +F+
Sbjct: 389 LAWLRWLLIHLVYIVGFKSRLATAISWTWSFL 420
>gi|95007395|emb|CAJ20615.1| NADH dehydrogenase, putative [Toxoplasma gondii RH]
Length = 559
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 91/431 (21%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV C++ + + W+ SYD LV+A GA+ +TFG+ GVKENA F++E+ A+ +R
Sbjct: 125 KVRCQSTHGKAQDAREWE--ESYDYLVVAAGADVNTFGVPGVKENAFFVKELEDARRLRS 182
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
L + + VPG+SEEEK +LLH VVVG GPTGVE + E+ DF + + ++ +
Sbjct: 183 ALFDVIETASVPGVSEEEKKKLLHFVVVGAGPTGVEVAAEIDDFFQAEGATHFPQLRPLV 242
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSG-VRL-----VRGIVKDVDSQKLILNDGT- 173
+T++E +L+++++ ++ +A L ++ V L V G+ D + DG
Sbjct: 243 RITVVEMLPTVLAAYNNDVQAFAKRLLEENPRVDLCLQSQVVGVGPDSVKVRTKRADGQV 302
Query: 174 ---EVPYGLLVWSTGVGPSTLVKSLDLPK-----------SPGGRIGIDEWLRVPSVQDV 219
E+P GLLVW++G+ + LDL + SP I +D+ ++V + V
Sbjct: 303 EEKEMPCGLLVWASGIKSPKVC--LDLARKTAELREAQQQSP--VILVDQQMKVRGCEGV 358
Query: 220 FAVGDCSG-------------YLESTGK----------------TVLPALA--------- 241
+A+GDC Y +T K TV P LA
Sbjct: 359 YALGDCCRLSPPPLVQHADTLYEAATAKGAASTDWLEREAPKLSTVFPQLASSKYDFSQK 418
Query: 242 ----QVAERQGKYLFSLLNRIGKAGGGRANSAK-----------------DMELGDPFVY 280
Q+ + Q L + ++ +A A +AK + FV
Sbjct: 419 PRQTQMTKEQFVKLLADIDAAYRAPAPTAQNAKQAGRYLAQTFNAFPSVEEKRRAPAFVN 478
Query: 281 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 340
+ G++ +G +A D+ E L G + L+W++AYL ++ N W
Sbjct: 479 QTRGALVYLGHGQAAADI----EGWRTFLGGAATLLLWKAAYLQMQLTLHNAVACLGGWL 534
Query: 341 TTFVFGRDISR 351
T + GR + R
Sbjct: 535 RTSLVGRAVCR 545
>gi|374290259|ref|YP_005037312.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377051|gb|AEU09239.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 424
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 167/324 (51%), Gaps = 21/324 (6%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+IA G+ + FG ++ + ++ + A IR +L N + + + +E+ +L
Sbjct: 103 YDYLIIATGSITNYFGNKNIEFFSLPMKSIPEALNIRSLILQNFEYALLTK-NSKEREKL 161
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFDDRLRH 141
+ V+VGGGPTGVE +G L++ ++ Y + ++++ L++A+ +L ++
Sbjct: 162 ITFVIVGGGPTGVELAGSLAEMKKYILQNDYPDLNIQHMNIHLLQASSRLLDGMSEKSSK 221
Query: 142 YATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 200
A L + GV + + +VKD DS+ + ++ ++ ++W+ GV + + +
Sbjct: 222 QAFKNLKELGVNIWLNCLVKDYDSEIIFMDKNRKIESANVIWAAGVKGAIIKGFIKEDIM 281
Query: 201 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQGKYLFSLLNRIG 259
G RI +D +L+ ++FA+GD + +++ P AQ A +QGK+L N
Sbjct: 282 SGQRILVDNYLKTLKYPNIFAIGDVAYIIKNKYYPNGHPMTAQPAIQQGKWLAKNFNYF- 340
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+ ++G PF Y++LG+MATIGR KA+ D K L GFL+W++W
Sbjct: 341 ---------LLNNKIGPPFKYKNLGNMATIGRNKAVCDFTYFK------LKGFLAWIIWM 385
Query: 320 SAYLTRVVSWRNRFYVAVNWATTF 343
+L +V +RN+ V NW +
Sbjct: 386 FVHLISLVGFRNKIIVLTNWIIQY 409
>gi|328950100|ref|YP_004367435.1| NADH dehydrogenase (ubiquinone) [Marinithermus hydrothermalis DSM
14884]
gi|328450424|gb|AEB11325.1| NADH dehydrogenase (ubiquinone) [Marinithermus hydrothermalis DSM
14884]
Length = 430
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 155/326 (47%), Gaps = 24/326 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
I YD LV+A G++++ FGI GV E+A L+ + A+EIR + +L+ V E K
Sbjct: 94 PIPYDYLVVAAGSKSNDFGIPGVAEHAFGLKTLKEAKEIRDR-ILSACEEAVHTPDPERK 152
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDDR 138
LL V+VGGGPTGVE +G L + +R+ Y + I + LIEA +L+
Sbjct: 153 RALLTWVIVGGGPTGVELAGALGELRNHVIRRDYPELDPREIRILLIEAGPRVLAHLSPA 212
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
YA L + G+ + R +V +V + L +G +P VWS GV + L L
Sbjct: 213 SSAYAQRFLERLGIEVMTRAMVAEVTPSGVKLKNGAFIPSFTTVWSAGVAGAALP---GL 269
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P GR+ L + V+ VGD + + P +AQVA +QG
Sbjct: 270 PAERNGRVPTTPELHLEGDPHVYVVGDVNLLINPKTGRPYPQVAQVAIQQGTL------- 322
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
AG + L PF Y+ G+M T+GR A++ E+ + L GF +W+
Sbjct: 323 ---AGRNIRRHLRGQPL-RPFQYKDKGNMVTLGRNHAVL------ETGRVRLTGFPAWVA 372
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTF 343
W +L + RNRF V NWA ++
Sbjct: 373 WLGVHLMYLTGGRNRFMVMTNWAYSY 398
>gi|213965965|ref|ZP_03394155.1| NADH dehydrogenase [Corynebacterium amycolatum SK46]
gi|213951379|gb|EEB62771.1| NADH dehydrogenase [Corynebacterium amycolatum SK46]
Length = 473
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 175/355 (49%), Gaps = 44/355 (12%)
Query: 1 MKVHCETVTDEL-RTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 59
+ V + VT EL W+ YD L++A GA S FG E A ++ + A EI
Sbjct: 90 IDVEKQVVTSELGHQTSKWE----YDHLLVAAGAGQSYFGNDHFAEFAPGMKNIDDALEI 145
Query: 60 RRKLLLNLM---LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-S 115
R +++ L+D P E+ RLL VVVG GPTGVE +G+L++ R + Y S
Sbjct: 146 RARIIGAFERAELTDDPA----ERERLLTFVVVGAGPTGVELAGQLAELANRTLASSYRS 201
Query: 116 HVKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLI---LN 170
+ V L++ A ++L F RL A L K GV + G +V DV+ + + +
Sbjct: 202 YNPHAARVVLLDGAPQVLPPFGKRLGRKAQKSLEKMGVIVKLGAMVTDVNEEGVTYKNMK 261
Query: 171 DGTE--VPYGLLVWSTGVGPSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGD 224
DGTE +P +WS GV S L K + GR+ ++E + ++V+ VGD
Sbjct: 262 DGTEEFIPSFCKIWSAGVSASPLGKMIAEQTGAETDRAGRVVVNEDMTAGDYKNVYVVGD 321
Query: 225 CSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG 284
S + LP +AQVA + G+Y+ N +A G +D+ PF Y G
Sbjct: 322 MS------NRENLPGVAQVAIQGGEYVAE--NIAAEADG------RDVAERQPFEYFDKG 367
Query: 285 SMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
SMAT+ R+ A+ + + + + GF+ W++W + +L +V +RNRF V+W
Sbjct: 368 SMATVSRFSAVAKMGK------VEVTGFIGWVLWLAVHLMFLVGFRNRFVSCVSW 416
>gi|193213153|ref|YP_001999106.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chlorobaculum parvum NCIB 8327]
gi|193086630|gb|ACF11906.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chlorobaculum parvum NCIB 8327]
Length = 430
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 170/330 (51%), Gaps = 26/330 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA+ FG + +E+A L+ + A EIRR+++ ++ +E K
Sbjct: 95 LEYDYLVLACGAQHHYFGKNDWEEHAPGLKNLAQASEIRRRVMEAYEAAERTKDPKERKK 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDRL 139
+L V+VGGGPTGVE +G + + + + Y ++ + + ++EA E IL +F L
Sbjct: 155 QLTF-VIVGGGPTGVELAGSIGEMSRYTLSKFYRNIDPKLTRIFIVEAAERILGTFSHEL 213
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVKSLDL 197
AT +L K GV++ +V DVD+ + + G E + ++W+ GV S + ++ +
Sbjct: 214 SSKATRELEKLGVQVWTSSMVSDVDADGVQI--GRERIEAATVLWAAGVKASEIGPNMGV 271
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GRI I+ L +P +VF GD + + G T LP +A VA +QG + ++ R
Sbjct: 272 ETDRSGRIKIENDLSLPGHPEVFVGGDQACFTLEDGST-LPGMAPVAMQQGNAIGRMI-R 329
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
G R PF YR G MATIGR KA+V++ L G L+W
Sbjct: 330 DDLKGKPR----------KPFKYRDKGQMATIGRNKAIVEI------GNLKFDGALAWFT 373
Query: 318 WRSAYLTRVVSWRNRFYVAVNWA-TTFVFG 346
W ++ + ++R+R +V + WA + F FG
Sbjct: 374 WLLVHIYYLSTFRHRVFVLMQWAWSYFTFG 403
>gi|392963239|ref|ZP_10328665.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans DSM
17108]
gi|421056797|ref|ZP_15519714.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B4]
gi|421060884|ref|ZP_15523300.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B3]
gi|421065621|ref|ZP_15527343.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans A12]
gi|421069382|ref|ZP_15530554.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pelosinus fermentans A11]
gi|392437977|gb|EIW15839.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B4]
gi|392450402|gb|EIW27455.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pelosinus fermentans A11]
gi|392451063|gb|EIW28057.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans DSM
17108]
gi|392453647|gb|EIW30516.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B3]
gi|392458482|gb|EIW35012.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans A12]
Length = 420
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 179/336 (53%), Gaps = 25/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVIA G + FG+ +++N ++ + + IR +L L+ +++ +
Sbjct: 100 EIGYDYLVIAAGGSTNYFGMESMEKNGFGMKTLDESVMIRNHVLRMFELAAHEKDADKRR 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSSFDD 137
+ LL V+VGGGPTGVE +G LS+ I + + Y H ++ + + L+EA +++ ++
Sbjct: 160 A-LLTFVIVGGGPTGVESAGALSELIYHVMVKEY-HTLNFKEVRIMLVEASDKLFATMPK 217
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
LR L + V + + V D + +K+ L G +P +VW+ GV ++L+ +L
Sbjct: 218 ELRDATVETLIRKHVEVRLCVQVTDYNGEKMSLKGGEVIPTYTVVWAAGVKANSLIDTLK 277
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ ++ R ++E+L++P+ +VF +GD + +++ G+ LP +A VA +Q + +
Sbjct: 278 VEQASMRRAIVNEFLQLPNRPEVFVIGDSAQFMQ--GERPLPMVAPVAIQQAEVTAKNIR 335
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ + K+++ F YR +G+MATIGR A+V + K GF++W
Sbjct: 336 SLIR--------GKELK---KFTYRDVGNMATIGRNAAVVHMGNFKTH------GFIAWA 378
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W ++ R++ +RNR V V W ++ + RI
Sbjct: 379 IWSFVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 414
>gi|365879909|ref|ZP_09419305.1| NADH dehydrogenase protein [Bradyrhizobium sp. ORS 375]
gi|365292047|emb|CCD91836.1| NADH dehydrogenase protein [Bradyrhizobium sp. ORS 375]
Length = 416
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 156/321 (48%), Gaps = 21/321 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ +D LV+A G S F A L+ + A IR ++L ++ +
Sbjct: 99 LPFDYLVLATGVTTSYFNHPEWARFAPGLKTIEDATRIRAQILTCFERAERTD-DVALRQ 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRL 139
+L+ V+VGGGPTGVE +G ++D + + H+ V LIEA + +LS+F D L
Sbjct: 158 KLMTFVIVGGGPTGVEMAGSIADIAQNVLAGDFRHIDPQSAKVVLIEAGQRLLSNFADEL 217
Query: 140 RHYATTQLSKSGVRLVR-GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
Y L + V ++ V + + L++ + L+W+ GV + +
Sbjct: 218 SDYTRKALRRMNVDVITDAAVTECTRDSVTLSNRRHIACCSLLWAAGVRATPAADWIGAK 277
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GRI +D+ LRVP ++FAVGD + S+G +P LA A++ G+Y+ L+
Sbjct: 278 SDRAGRIVVDDHLRVPPHTNIFAVGDIAA--ASSGGKPVPGLAPAAKQMGRYVGELI--C 333
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
G GG + K + PFVYRH G +ATIGR A+V L K L L G L W W
Sbjct: 334 GDIVGG---ARKPL----PFVYRHQGDLATIGRKSAVVSL------KHLKLTGLLGWTFW 380
Query: 319 RSAYLTRVVSWRNRFYVAVNW 339
++ ++ RNR VA+NW
Sbjct: 381 GVVHIYFLIGLRNRITVALNW 401
>gi|310795172|gb|EFQ30633.1| hypothetical protein GLRG_05777 [Glomerella graminicola M1.001]
Length = 711
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 141/248 (56%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL+++ A+++R +++ NL + VP S+E
Sbjct: 265 RFYVPYDKLVIAVGSTTNPHGVKGL-ENAHFLKDISDARKVRNQVMHNLEQACVPTTSDE 323
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ Q + +++ I V LI++ + IL+++D
Sbjct: 324 ERKRLLSFVVSGGGPTGVEFAAELFDMLNEDLTQHFPKLLRNEISVHLIQSRSHILNTYD 383
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 187
+ + YA ++ V L VK+V K++ DG+ E+P G +WSTGV
Sbjct: 384 EAVSKYAEEHFARDQVDILTNSRVKEVLPDKIVFTQKQPDGSLVTKELPMGFCLWSTGVA 443
Query: 188 PSTLVKSLDLPKSPGGR----IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ L K L P + D LR+ + DV+A+GDCS + ++ L
Sbjct: 444 QADLCKRLSAKLGPSQTNRHALETDTHLRLNGTPLGDVYAIGDCSTVQNNVADHIITFLR 503
Query: 242 QVAERQGK 249
VA ++GK
Sbjct: 504 GVAFKRGK 511
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGG-RANSAKDMELGD----PFVYRHLGSMATI 289
T LPA AQ A +QG+YL N++ + G +AN D ++ F Y HLGS+A I
Sbjct: 576 TSLPATAQRAHQQGQYLAHKFNKLARTSDGLKANMVFDGDIDSVVYKAFEYHHLGSLAYI 635
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ D +G + AG L W V WRS Y + VS R R +A++WA +FGR
Sbjct: 636 GN-SAVFDW-----GEGWNFAGGL-WAVYMWRSVYFAQSVSLRTRILLAMDWAKRGLFGR 688
>gi|221482891|gb|EEE21222.1| pyridine nucleotide-disulphide oxidoreductase, putative [Toxoplasma
gondii GT1]
Length = 618
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 91/431 (21%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV C++ + + W+ SYD LV+A GA+ +TFG+ GVKENA F++E+ A+ +R
Sbjct: 184 KVRCQSTHGKAQDAREWE--ESYDYLVVAAGADVNTFGVPGVKENAFFVKELEDARRLRS 241
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
L + + VPG+SEEEK +LLH VVVG GPTGVE + E+ DF + + ++ +
Sbjct: 242 ALFDVIETASVPGVSEEEKKKLLHFVVVGAGPTGVEVAAEIDDFFQAEGATHFPQLRPLV 301
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSG-VRL-----VRGIVKDVDSQKLILNDGT- 173
+T++E +L+++++ ++ +A L ++ V L V G+ D + DG
Sbjct: 302 RITVVEMLPTVLAAYNNDVQAFAKRLLEENPRVDLCLQSQVVGVGPDSVKVRTKRADGQV 361
Query: 174 ---EVPYGLLVWSTGVGPSTLVKSLDLPK-----------SPGGRIGIDEWLRVPSVQDV 219
E+P GLLVW++G+ + LDL + SP I +D+ ++V + V
Sbjct: 362 EEKEMPCGLLVWASGIKSPKVC--LDLARKTAELREAQQQSP--VILVDQQMKVRGCEGV 417
Query: 220 FAVGDCSG-------------YLESTGK----------------TVLPALA--------- 241
+A+GDC Y +T K TV P LA
Sbjct: 418 YALGDCCRLSPPPLVQHADTLYEAATAKGAASTDWLEREAPKLSTVFPQLASSKYDFSQK 477
Query: 242 ----QVAERQGKYLFSLLNRIGKAGGGRANSAK-----------------DMELGDPFVY 280
Q+ + Q L + ++ +A A +AK + FV
Sbjct: 478 PRQTQMTKEQFVKLLADIDAAYRAPAPTAQNAKQAGRYLAQTFNAFPSVEEKRRAPAFVN 537
Query: 281 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 340
+ G++ +G +A D+ E L G + L+W++AYL ++ N W
Sbjct: 538 QTRGALVYLGHGQAAADI----EGWRTFLGGAATLLLWKAAYLQMQLTLHNAVACLGGWL 593
Query: 341 TTFVFGRDISR 351
T + GR + R
Sbjct: 594 RTSLVGRAVCR 604
>gi|107102095|ref|ZP_01366013.1| hypothetical protein PaerPA_01003144 [Pseudomonas aeruginosa PACS2]
Length = 356
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 164/340 (48%), Gaps = 30/340 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ +YD LV+A GA + FG A L+ + A IR ++L ++ ++
Sbjct: 20 MRQTYDTLVLATGATHAYFGHDEWGAFAPGLKTLEDATTIRGRILAAFEEAERTS-DPQQ 78
Query: 80 KSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 134
++ L V++GGGPTGVE +G ++ D + RD R S V LIEA +LS
Sbjct: 79 RAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGPRLLSV 135
Query: 135 FDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
F + L Y L K GV +V G S ++ G + +VW+ GV S +
Sbjct: 136 FPEDLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGKPLSAKTIVWAAGVQASPAARW 195
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
L GR+ + L V +VFA+GD + + GK V P +A A++QGKY+ +L
Sbjct: 196 LGAASDRAGRVVVGPDLTVAGRPEVFAIGDTASCTMADGKPV-PGIAPAAKQQGKYVANL 254
Query: 255 LNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+ R GK G PF YRH G++ATIGR A++D+ + K L G
Sbjct: 255 IGRRLKGKPADG------------PFKYRHQGNLATIGRSLAVIDMGRVK------LRGA 296
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W +W+ A++ ++ RNR VA++W G SRI
Sbjct: 297 FAWWIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 336
>gi|424795163|ref|ZP_18221049.1| Putative NADH dehydrogenase [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795593|gb|EKU24256.1| Putative NADH dehydrogenase [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 435
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 171/337 (50%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG +A L+ + A +RR LLL ++ ++
Sbjct: 99 LDYDYLLVATGATHAYFGHDEWARHAPGLKTLDDALHLRRHLLLAFERAEAES-DPAARA 157
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRL 139
L +VGGGPTGVE +G L++ ++ + + V LIEA +L+SF +RL
Sbjct: 158 AWLSFAIVGGGPTGVELAGTLAEIARHTLKHEFRRIDPAEARVRLIEAGPRVLASFPERL 217
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G+ V D+D+ L T VP +VW+ GV S L ++LD+P
Sbjct: 218 SAKAQRQLEKLGVEVLTGVPVADIDASGYRLGS-TFVPARTVVWAAGVAASPLARTLDVP 276
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L +P +V GD + + GK V P +A A++ G+++
Sbjct: 277 LDRSGRVQVQPDLSIPGHPEVCVAGDLAALQQPDGKPV-PGVAPAAKQMGRHVAE----- 330
Query: 259 GKAGGGRANSAKDM--ELGD-PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
N AK + E GD PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 331 --------NLAKRLRGEAGDAPFSYADYGNLATIGRMAAIVHLGR------LQLSGLLAW 376
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W +A++ ++ +RNR V +NWA + + +RI
Sbjct: 377 WFWLAAHVFFLIGFRNRLVVLLNWAWAYWSYQHAARI 413
>gi|421077121|ref|ZP_15538092.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans JBW45]
gi|392524509|gb|EIW47664.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans JBW45]
Length = 420
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 176/335 (52%), Gaps = 23/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LVIA G + FG+ +++N ++ + + IR +L L+ +++ +
Sbjct: 100 EIGYDYLVIAAGGSTNYFGMESMEKNGFGMKTLDESVMIRNHVLRMFELAAHEKDADKRR 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
+ LL V+VGGGPTGVE +G LS+ I + + Y ++ + + L+EA +++ ++
Sbjct: 160 A-LLTFVIVGGGPTGVESAGALSELIYHVMVKEYHNMNFKEVRIMLVEASDKLFATMPKE 218
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR L + V + + V D + +K+ L G +P +VW+ GV ++L+ +L +
Sbjct: 219 LRDATVETLIRKHVEVRLCVQVTDYNGEKMSLKGGEVIPTYTVVWAAGVKANSLLDTLKV 278
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
++ R ++E+L++P+ +VF +GD + +++ G+ LP +A VA +Q +
Sbjct: 279 EQASMRRAIVNEFLQLPNRPEVFVIGDSAQFIQ--GERPLPMVAPVAIQQAEV------- 329
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
A + + EL F YR +G+MATIGR A+V + K GF++W +
Sbjct: 330 ---AAKNIRSLIRGKEL-KKFTYRDVGNMATIGRNAAVVHMGNFKTH------GFIAWAI 379
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ R++ +RNR V V W ++ + RI
Sbjct: 380 WSFVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 414
>gi|384245810|gb|EIE19302.1| nucleotide-binding domain-containing protein [Coccomyxa
subellipsoidea C-169]
Length = 557
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 25/297 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
FK+ YD LV+A+G+ +TFGI GV E+ TF + + A +RRK+ + +P +S+EE
Sbjct: 113 FKVPYDILVLAVGSVNNTFGIKGVAEHTTFFKSIDDAHNLRRKVSECFERASLPAVSQEE 172
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ RLL V+VGGGPTGVE + EL D ++ D+R+ Y + + + +IE + +LS++D
Sbjct: 173 RERLLSFVIVGGGPTGVEVAAELHDMVVDDLRRIYPSLVSLVRIRVIELQDHVLSTYDRE 232
Query: 139 LRHYATTQLSKSGVRLVRGI-------VKDVDSQKLIL-----NDGTEVPYGLLVWSTGV 186
+ Y ++ S+ G R + GI V V K+I+ N E+P+G VW+TGV
Sbjct: 233 ISTYTASEFSRRG-RCLEGIDLVLNSRVASVAPNKVIVVNSQTNSTNEIPFGACVWATGV 291
Query: 187 GPSTLVKSLD--LPKSPGGR---IGIDEWLRV-PSVQDVFAVGDCSGYLESTGKTVLPAL 240
L+K L LP+ I D++LRV S ++A+GD + ++ LP L
Sbjct: 292 AMHPLIKQLQERLPEGSQTHFRSIVTDQYLRVLGSGGSIYAIGD-AATIQQACTHCLP-L 349
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATI--GRYKAL 295
A + LF + + K G + + +D+ Y H A G+Y L
Sbjct: 350 ESKALSHSEELFDQAD-VSKDGKLQLSEVRDILRKSSEDYSHFAEHARFLDGKYGGL 405
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 233 GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 292
G LPA AQVA++QG+Y+ LL++ G+ K + F Y H GS+A +GR
Sbjct: 449 GLRALPATAQVAKQQGEYVAKLLSK------GKGTPGKPITGFKGFRYGHKGSLAYVGRD 502
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
KA++D+ + G+ + ++W+ +S RN V+ +W T +FGRDISR+
Sbjct: 503 KAVMDVPAIG-----PVFGYTAGVMWKGFETYSQISLRNILLVSSDWVRTKLFGRDISRV 557
>gi|298249569|ref|ZP_06973373.1| NADH dehydrogenase (ubiquinone) [Ktedonobacter racemifer DSM 44963]
gi|297547573|gb|EFH81440.1| NADH dehydrogenase (ubiquinone) [Ktedonobacter racemifer DSM 44963]
Length = 436
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 166/329 (50%), Gaps = 24/329 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA F K A L+ + A+ IR KLL ++ E +K
Sbjct: 115 VPYDYLVVATGAREKYFEHDEWKPLAPGLKSIEDARAIRHKLLHAFETAEQERDVERQKE 174
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDRL 139
LL V+VG GPTGVE +G +++ + + + H+ + + LIEA+E +LS+F ++L
Sbjct: 175 -LLTFVIVGAGPTGVEMAGAIAEVARKVLTSEFRHIDPSLARIVLIEAHEWVLSAFPEKL 233
Query: 140 RHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
H A +L + GV + + V +D + ++ N G + + W+ GV S LD+
Sbjct: 234 SHRAERELRRLGVEICTKTFVTQIDERGVVAN-GERIQACTVFWTAGVQASPAANWLDVE 292
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + E L VP +++VF +GD + + +LP +A VA +QG Y+ L I
Sbjct: 293 ADGAGRVPVAEDLSVPGLENVFVIGDTAAC--TWRGRLLPGVAPVAMQQGVYVARL---I 347
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
GRA PF Y G++ATIGR A++ + + L L GF +W++W
Sbjct: 348 AARVAGRAM--------QPFHYVDKGNLATIGRGFAVLQMGR------LKLWGFPAWVLW 393
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
++ ++ + NR V + WA ++ R
Sbjct: 394 LLIHIYYLIGFENRILVLMQWAWAYITFR 422
>gi|429730477|ref|ZP_19265124.1| pyridine nucleotide-disulfide oxidoreductase [Corynebacterium durum
F0235]
gi|429147633|gb|EKX90657.1| pyridine nucleotide-disulfide oxidoreductase [Corynebacterium durum
F0235]
Length = 467
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 170/351 (48%), Gaps = 36/351 (10%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+ V + VT EL + + YD L++A GA S FG E A ++ + A EIR
Sbjct: 90 INVEQQIVTTELGAIVR---RYEYDYLIVAAGAGQSYFGNDHFAEFAPGMKTIDDALEIR 146
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-D 119
+++ +++ +E++ RLL V+VG GPTGVE +G++++ R +R YS+ +
Sbjct: 147 ARIIGAFERAEL-ATDKEQRERLLTFVIVGAGPTGVELAGQVAEMAHRTLRDEYSNFDTN 205
Query: 120 YIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVR-----LVRGIVKDVDSQKLILNDGT 173
V L++ A ++L F RL A QL K GV +V I KD + K +D
Sbjct: 206 SAKVVLLDGAPQVLPPFGKRLGRNAQRQLEKLGVTVKLNAIVTDITKDSVTYKSTQDDTI 265
Query: 174 E-VPYGLLVWSTGVGPSTLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 228
E +P +WS GV S L K + GR+ ++ L V +VF +GD Y
Sbjct: 266 ETIPCFCKIWSAGVAASPLGKLIADQTGVEIDRAGRVMVNPDLSVGDHNNVFVIGDMMNY 325
Query: 229 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMAT 288
LP +AQVA + G+Y + N + + G +D +PF Y GSMAT
Sbjct: 326 ------NNLPGVAQVAIQGGEY--AAENIVAEVDG------RDPNAREPFEYFDKGSMAT 371
Query: 289 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ RY A+V + + + GF+ W+ W ++ +V +RNR A +W
Sbjct: 372 VSRYSAVVKIGK------VEFTGFIGWVAWLLVHMMFLVGFRNRATAAASW 416
>gi|393788102|ref|ZP_10376233.1| hypothetical protein HMPREF1068_02513 [Bacteroides nordii
CL02T12C05]
gi|392656315|gb|EIY49954.1| hypothetical protein HMPREF1068_02513 [Bacteroides nordii
CL02T12C05]
Length = 432
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 163/345 (47%), Gaps = 25/345 (7%)
Query: 5 CET--VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
CE V E LE I YD LVIA G + FG + + L+ A R +
Sbjct: 86 CEAQRVIPEQNILETSIGAIEYDYLVIATGCYTNYFGNDKMALHTMSLKTTAEALYNRNQ 145
Query: 63 LLLNL-MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DY 120
+L + + + E EK L+ ++VGGG TG+E SG L++ + Q Y + +
Sbjct: 146 VLESFEKAQNTSNLKEREK--LMTFIIVGGGATGIELSGALAEMRKFILPQDYPDLDIEQ 203
Query: 121 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYG 178
+ + LI+A +LS+F ++ L+K GV + V V D ++ L L DGT +P
Sbjct: 204 MRIVLIDAGPRLLSAFSEKSSTEVQDYLAKKGVEIKVDSKVVDYENDLLTLGDGTAIPST 263
Query: 179 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238
+ W GV +++ PG R+ +D + +V +VFA+GD + + P
Sbjct: 264 NIYWVAGVKANSIEGLPQDAYGPGNRLNVDVFNKVTGTNNVFAIGDTALMISEDYPRGHP 323
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
+ Q A +Q K L LN I K + PFVY + GSMATIGR A+V+L
Sbjct: 324 QVVQPAIQQAKLLVQNLNNIEKGLPLK-----------PFVYHNKGSMATIGRNNAIVEL 372
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
K + GF +W VW +L +V +NR ++ ++W ++
Sbjct: 373 ------KNIRFGGFPAWAVWLFIHLMSIVGVKNRLFIFIDWMWSY 411
>gi|255076749|ref|XP_002502044.1| fad-dependent pyridine nucleotide-disulphide oxidoreductase
[Micromonas sp. RCC299]
gi|226517309|gb|ACO63302.1| fad-dependent pyridine nucleotide-disulphide oxidoreductase
[Micromonas sp. RCC299]
Length = 576
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 194/450 (43%), Gaps = 111/450 (24%)
Query: 2 KVHC-----ETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHA 56
K+ C E D+ R E F + YD LV A+GA +TFG+ GV+EN F +E+ HA
Sbjct: 137 KITCRAADPECFDDKGRDCEWHTFDVDYDYLVTAVGAVPNTFGVPGVEENCMFFKEIVHA 196
Query: 57 QEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-S 115
RR++ + +P + E LL VV+G GPTGVE + EL D + +DV + Y S
Sbjct: 197 SRFRREVNERFERATLPDVPESRMRELLTFVVIGAGPTGVELAAELYDMVYQDVAKMYPS 256
Query: 116 HVKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSK------------------------- 149
+ ++ + +I+ E ILS++D R+ YAT +
Sbjct: 257 RLIPFVSIKIIDLQEKILSAYDRRIAEYATDFFQRANIECLLNKQVGEVKPDAVVITDKI 316
Query: 150 ---------------SGVRLVRGIVKDVDS---------------QKLILNDGTEVPYGL 179
SG+RL K +DS + L +N + +
Sbjct: 317 TGEKSEVPFGLAVWCSGIRLNPLCEKIMDSLPEGTQENRRSLACDKNLRVNGSNGSIFAV 376
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGG--------------------RIGIDEWLR----VPS 215
+T V P ++ K+++L KS G++E+ V +
Sbjct: 377 GDCATIVRPRSMSKAMELYKSAAKCDDAGECEIDLDKDQIKAALNKGVEEFPHLEEVVNN 436
Query: 216 VQDVFAV-----GDCS--GYLE-----STGKTVLPALAQVAERQGKYLFSLLNRIGKAGG 263
+ D FAV G C+ G+ + G LPA AQVA+++G+YL + +
Sbjct: 437 IDDKFAVFAQANGRCTFDGFSKMLTEVDNGLRALPATAQVAKQEGEYLAAFFAQCD---- 492
Query: 264 GRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA-GFLSWLVWRSAY 322
++ K M F Y H GS+A IG+ A+ D+ G ++ G + ++W+S
Sbjct: 493 --GDATKLMGDETKFEYNHKGSLAYIGKDAAVADI------PGFTIVKGIAAGIIWKSFE 544
Query: 323 LTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
VS RN F VA + T +FGRDISR
Sbjct: 545 TISQVSVRNIFLVASDMIRTKLFGRDISRF 574
>gi|66804033|ref|XP_635825.1| calcium-binding EF-hand domain-containing protein [Dictyostelium
discoideum AX4]
gi|60464160|gb|EAL62320.1| calcium-binding EF-hand domain-containing protein [Dictyostelium
discoideum AX4]
Length = 654
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 131/241 (54%), Gaps = 34/241 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K KI YD+LV+A+G+ FG GV+E+ +L+E A +IR+K++ ++ PG SEE
Sbjct: 226 KAKIQYDRLVVAVGSVPQCFGTKGVEEHCIYLKEAMDAHKIRQKIMDCFERANFPGTSEE 285
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
EK RLL +VVGGGPT +E S L D+I D+ + + H+ Y +TL++ A+ +L++FD
Sbjct: 286 EKKRLLSFLVVGGGPTSIEGSSALYDYIKEDLSKMFPHLSKYPKITLVQSADHLLNTFDL 345
Query: 138 RLRHYATTQLSKSGVRLVRGIVKDVDSQK---LILNDG---------------------- 172
++ +Y Q + G+ ++ + V+ +K ++L
Sbjct: 346 KISNYTEKQFERIGIEVLTN-TRAVEVKKDHLVVLKKAHARPPGEPINATEKPSKGPEVS 404
Query: 173 --TEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQ--DVFAVGDC 225
TE+P+G+ +WSTGVGP + + L + R I D L+V + +V+A GDC
Sbjct: 405 IPTEIPFGMCIWSTGVGPRKITQKLCDSIESQKNNRAITTDSTLKVLGIPNGNVYAAGDC 464
Query: 226 S 226
S
Sbjct: 465 S 465
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 16/120 (13%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP--FVYRHLGSMATIGRY 292
T LP+ AQ A +Q KYL LN KD P F Y+HLGS A IG +
Sbjct: 549 TALPSTAQCASQQAKYLAETLND---------QYGKDPSTFQPHNFSYKHLGSFAYIGSH 599
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A+ D+ Q + GF W +W++ YL + S +N+F V+++W T +FGRDISRI
Sbjct: 600 TAIADIPQT-----FTGGGFGVWWMWKAVYLKKQFSLKNKFLVSIDWVKTTLFGRDISRI 654
>gi|424871453|ref|ZP_18295115.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|393167154|gb|EJC67201.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 421
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 173/339 (51%), Gaps = 28/339 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGIS 76
+ YD LV+A GA + FG + A L+ + A IRR+LLL +++ P +
Sbjct: 94 MTLGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRLLLAFEKAEMEPDPAV- 152
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSS 134
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +
Sbjct: 153 ---RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPT 209
Query: 135 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 193
F + L YA L K GV + G V + ++ + + + T V +VW+ GV S +
Sbjct: 210 FAEELSAYAQKALEKLGVEIHLGKPVTECNADGVKIGE-TFVASRTIVWAAGVTASPAAR 268
Query: 194 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
LD+ GR+ +++ L P + +VF VGD + + GK V P +A A++QG Y+
Sbjct: 269 WLDVASDRAGRVVVEKDLSAPGLPNVFVVGDTASVMREDGKPV-PGIAPAAKQQGGYVAK 327
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
++ + G A + PF Y H GS+ATIG+ A++D + K L G+L
Sbjct: 328 VIR--ARISGKPAPA--------PFRYWHQGSLATIGKSAAIIDFGRIK------LKGWL 371
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|265985530|ref|ZP_06098265.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella sp. 83/13]
gi|306838133|ref|ZP_07470990.1| NADH dehydrogenase [Brucella sp. NF 2653]
gi|264664122|gb|EEZ34383.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella sp. 83/13]
gi|306406870|gb|EFM63092.1| NADH dehydrogenase [Brucella sp. NF 2653]
Length = 424
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 177/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSTYARKALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ +++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGHPVPGIAPAAKQQGAYVATVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF YRH G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYRHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|189499609|ref|YP_001959079.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chlorobium phaeobacteroides BS1]
gi|189495050|gb|ACE03598.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chlorobium phaeobacteroides BS1]
Length = 428
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 168/330 (50%), Gaps = 24/330 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++SYD L++A G + FG +ENA L+ + A EIRR+++ ++ E+
Sbjct: 93 EMSYDYLILACGVKHHYFGHEEWEENAPGLKTIAQATEIRRRVMEAYEAAERTS-DPVER 151
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDR 138
+LL V+VGGGPTGVE +G + + + + Y H+ + + ++EA IL SF
Sbjct: 152 KKLLTFVIVGGGPTGVELAGSIGEMSRFTLSKFYKHIDPKLTRIFIVEAAPRILGSFSPE 211
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L AT L + GV++ +V +VD + + + + ++W+ GV L + +++
Sbjct: 212 LSSKATRALEQLGVQVWTNSMVTNVDENGVQIGN-ERIEASTVLWAAGVRAIGLGRKMEV 270
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GRI ++E L +P ++F GD + + TG LP +A VA +QG+ +
Sbjct: 271 DIDRSGRIIVEEDLSIPGYPEIFVGGDQAHFAHHTGNP-LPGMAPVALQQGQSI------ 323
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
G N K + PF+YR G MATIGR KA+V++ K L G ++W
Sbjct: 324 ----GKNILNEVKGKQR-KPFLYRDKGQMATIGRNKAIVEMGNMK------LFGSVAWFT 372
Query: 318 WRSAYLTRVVSWRNRFYVAVNWA-TTFVFG 346
W ++ + ++++R +V + W + F FG
Sbjct: 373 WLLVHIYYLATFKHRVFVLMQWGWSYFTFG 402
>gi|429852862|gb|ELA27977.1| alternative nadh dehydrogenase [Colletotrichum gloeosporioides Nara
gc5]
Length = 692
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 142/248 (57%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL+++ A+++R +++LNL + +P S++
Sbjct: 264 RFYVPYDKLVIAVGSTTNPHGVKGL-ENAHFLKDISDARKVRNQVMLNLEKACLPTTSDD 322
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ Q + +++ I V LI++ + IL+++D
Sbjct: 323 ERKRLLSFVVSGGGPTGVEFAAELFDMLNEDLTQHFPKLLRNEISVHLIQSRSHILNTYD 382
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 187
+ + YA ++ V L VK+V K+I DG+ E+P G +WSTGV
Sbjct: 383 ETVSKYAEEHFARDQVDVLTNSRVKEVLPDKIIFTQKQPDGSLVTKELPMGFCLWSTGVA 442
Query: 188 PSTLVKSLDLPKSPGGR----IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ L K L P + D LR+ + DV+A+GDCS + ++ L
Sbjct: 443 QTDLCKRLSAKLGPSQTNRHALETDTHLRLNGTPLGDVYAIGDCSTVQNNVADHIMTFLR 502
Query: 242 QVAERQGK 249
+A ++GK
Sbjct: 503 GLAFKRGK 510
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGG-RANSAKDMELGD----PFVYRHLGSMATI 289
T LPA AQ A +QG+YL N++ + G RAN D ++ F YRHLGS+A I
Sbjct: 575 TSLPATAQRAHQQGQYLAHKFNKMARTSEGLRANQVFDGDIDAVVYRAFEYRHLGSLAYI 634
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ D Q G S AG L W V WRS Y + VS R R +A++WA +FGR
Sbjct: 635 GN-SAVFDWGQ-----GWSFAGGL-WAVYMWRSVYFAQSVSLRTRILLAMDWAKRGLFGR 687
Query: 348 DI 349
D+
Sbjct: 688 DL 689
>gi|226363834|ref|YP_002781616.1| NADH dehydrogenase [Rhodococcus opacus B4]
gi|226242323|dbj|BAH52671.1| putative NADH dehydrogenase [Rhodococcus opacus B4]
Length = 434
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 40/339 (11%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+ I YD LV A GA + FG E L+ V A +RR+++ + S+
Sbjct: 96 RHTIGYDSLVAATGARQAYFGRDEFAEVTYALKTVADADRLRRQIVR--CFEEAHTTSDA 153
Query: 79 EKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSF 135
E+ R LLH +V+G GPTGVE +G++ + R + + + + VTL+E A E L F
Sbjct: 154 ERRRDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITAEEVTVTLVEGAGETLPVF 213
Query: 136 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGVGP- 188
+L Y L K+GV +V G +V D+D L+ + + ++WS G+
Sbjct: 214 GGKLSKYTQDSLEKAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGIQAN 273
Query: 189 ---STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
+ L GGR+ +DE L V DVFA+GD + LPA + A
Sbjct: 274 DFAAVLADRTGCETGRGGRLLVDEDLTVGRYDDVFAIGDMASL------NNLPAQSPFAM 327
Query: 246 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 305
+ G+++ +++ G RA LG PF YR GSMA I R++A+ + +
Sbjct: 328 QGGRHVAAIIT------GKRA-------LGTPFKYRDKGSMAIINRFRAITRVGK----- 369
Query: 306 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+ L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 370 -IELTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWFGSFL 407
>gi|386850499|ref|YP_006268512.1| NADH dehydrogenase [Actinoplanes sp. SE50/110]
gi|359838003|gb|AEV86444.1| NADH dehydrogenase [Actinoplanes sp. SE50/110]
Length = 463
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 36/339 (10%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ + YD L++A GA S FG ++A ++ + A E+R ++ ++D+ EE
Sbjct: 101 YTVEYDTLIVAAGASQSYFGNDEFADHAPGMKSIDDALELRARIFGAFEVADL-HTDPEE 159
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFDD 137
R L VVVG GPTG E +G++++ R + +Y H+ + L++A +L++F D
Sbjct: 160 IQRWLTFVVVGAGPTGTELAGQIAELAHRTLPGQYKHIDPRQARIILVDAIGAVLNTFGD 219
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLVK 193
L A QL+K GV + + V VDS + + D +P VW+ GV L +
Sbjct: 220 HLSAGAQRQLAKLGVEVKLNTKVVGVDSTGIDVEDPQGRHRIPSITKVWAAGVAAPPLAR 279
Query: 194 SLDLPKSPG------GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L +S G GR+ + VP ++F +GD + GK LP +AQVA +
Sbjct: 280 Q--LAESTGAKTDRAGRMFVAPDTSVPGHPEIFVLGDMMNLAGADGKP-LPGVAQVAIQS 336
Query: 248 GKYLFSLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 305
G++ + R GK E G PF Y GS+ATI R+ A+ + +
Sbjct: 337 GRHAADQIKRRLAGK------------ETGQPFKYFDKGSLATISRFSAVASIGK----- 379
Query: 306 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+ L+GF +W+VW + +L +V ++NR ++WA +F+
Sbjct: 380 -VRLSGFPAWVVWVAVHLFYLVGFKNRVTAVLHWAVSFI 417
>gi|134095227|ref|YP_001100302.1| NADH dehydrogenase transmembrane protein [Herminiimonas
arsenicoxydans]
gi|133739130|emb|CAL62179.1| NADH dehydrogenase [Herminiimonas arsenicoxydans]
Length = 435
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 164/340 (48%), Gaps = 30/340 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ +YD LV+A GA + FG A L+ + A IR ++L ++ ++
Sbjct: 99 MRQTYDTLVLATGATHAYFGHDEWGAFAPGLKTLEDATTIRGRILAAFEEAERTS-DPQQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 134
++ L V++GGGPTGVE +G ++ D + RD R S V LIEA +LS
Sbjct: 158 RAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGPRLLSV 214
Query: 135 FDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
F + L Y L K GV +V G S ++ G + +VW+ GV S +
Sbjct: 215 FPEDLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGKPLSAKTIVWAAGVQASPAARW 274
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
L GR+ + L V +VFA+GD + + GK V P +A A++QGKY+ +L
Sbjct: 275 LGAASDRAGRVVVGPDLTVAGRPEVFAIGDTASCTMADGKPV-PGIAPAAKQQGKYVANL 333
Query: 255 LNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+ R GK G PF YRH G++ATIGR A++D+ + K L G
Sbjct: 334 IGRRLKGKPADG------------PFKYRHQGNLATIGRSLAVIDMGRVK------LRGA 375
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W +W+ A++ ++ RNR VA++W G SRI
Sbjct: 376 FAWWIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|323343718|ref|ZP_08083945.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oralis
ATCC 33269]
gi|323095537|gb|EFZ38111.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oralis
ATCC 33269]
Length = 426
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 24/329 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+A GA + FG ++ A ++ V A IR +L N+ + + +E+
Sbjct: 101 EVEYDYLVMAAGAATNFFGNEHIQHEAYPMKTVSEAMSIRNIILSNIEKA-ISTTDNDER 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YIHVTLIEANEI-LSSFDD 137
+LL+ V+VGGGP+GVE +G LS+ + R V R H D +++ L+ A+++ L S
Sbjct: 160 QQLLNIVIVGGGPSGVEIAGALSE-MKRMVLPREYHDLDAGLMNIYLVNADDVLLKSMSP 218
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
A L V+L+ G V D ++L DG +P ++W +GV + +
Sbjct: 219 ESSASAERYLRNMEVKLILGKRVVDYKDNLVVLEDGNSIPAETVIWVSGVRATQIGGIDK 278
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
GGR+ +D + RV + DVF++GD C + P LAQVA +Q + L +
Sbjct: 279 ACIGRGGRLKVDAFNRVEGLNDVFSIGDQCIMTADPNYPDGHPQLAQVAIQQARNLAAN- 337
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
+A D PF YR+LG+MAT+GR KA+ ++ G G +W
Sbjct: 338 ----------LKAAADGHSMAPFRYRNLGTMATVGRNKAVAEI------AGCKFKGLFAW 381
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+W +L ++ RN+ V +NW ++
Sbjct: 382 LLWLVVHLRSILGVRNKVVVLLNWIWNYI 410
>gi|375143577|ref|YP_005006018.1| NADH dehydrogenase (ubiquinone) [Niastella koreensis GR20-10]
gi|361057623|gb|AEV96614.1| NADH dehydrogenase (ubiquinone) [Niastella koreensis GR20-10]
Length = 450
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 176/349 (50%), Gaps = 37/349 (10%)
Query: 4 HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
E+V R +E + YD LVIA GA + +G ++++A ++ V A +R +
Sbjct: 93 EVESVYPVERIIETSIGLVHYDYLVIATGATTNFYGNKQIEQHAIAMKSVEDALMLRNTI 152
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHV 123
+ N + G EE+ + L+ V+VGGGPTGVE +G LS+ +++ KDY +
Sbjct: 153 ICNFEKALQIG-DEEQLNSLMDFVIVGGGPTGVEIAGALSEL------RKHVFPKDYKEL 205
Query: 124 TLIEAN-EILSSFDDRLR---HYATTQ----LSKSGVRL-VRGIVKDVDSQKLILNDGTE 174
I+ + ++ S D L+ H A+T L K+GV++ + VK D ++L++G +
Sbjct: 206 DFIKMDIHLIQSGDHILKGMSHEASTHALKFLEKAGVQVWLNRRVKSFDGYTVVLDNGEK 265
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK 234
+ L+W+ GV + + + G R+ +DE+ RV +++FA+GD + +
Sbjct: 266 LITRTLIWAAGVTGAPIKGLSAECITSGNRLKVDEYNRVAGYENIFALGDIAEMATAELP 325
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGR 291
P LAQ A +QG+ L ++ + G P FVY GS+ATIGR
Sbjct: 326 EGYPMLAQPAIQQGRLL--------------GDNLPKLVAGKPLKKFVYTDKGSLATIGR 371
Query: 292 YKALVDLR-QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
KA+ D++ NKE K G +W +W +L ++ ++NR V +NW
Sbjct: 372 NKAVADVKFFNKEFK---TQGLFAWFIWLFVHLFSIIGFKNRLLVFINW 417
>gi|390956728|ref|YP_006420485.1| NADH dehydrogenase, FAD-containing subunit [Terriglobus roseus DSM
18391]
gi|390411646|gb|AFL87150.1| NADH dehydrogenase, FAD-containing subunit [Terriglobus roseus DSM
18391]
Length = 450
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 170/334 (50%), Gaps = 19/334 (5%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A G+ S FG + A L+ + A EIRR++LL L++ + E +
Sbjct: 102 LEYDYLILATGSTHSYFGKDEWEHLAPGLKTIEDAVEIRRRVLLAFELAE-GQMQETGRH 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDRL 139
L+ VV+GGGPTGVE +G +SD +R+ + H+ V ++E + IL ++ + L
Sbjct: 161 PALNFVVIGGGPTGVELAGAISDIAKLYIRRDFKHIDPATARVLIVEGSPTILGAYPEDL 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+ A QL++ V++ V DV ++++ + + +W+ GV S L K L +
Sbjct: 221 QQSALKQLAELDVQVRTNTRVTDVQPGYVVVDGHERIDSVVTLWAAGVQASPLGKLLGVE 280
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
G + +DE L ++F GD + + S GK V P +AQ A + G Y
Sbjct: 281 VDKRGAVLVDEQLHPVGHPEIFVCGDLA-HAMSEGKPV-PGVAQPAMQMGDY-------- 330
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
AG A K ++ PF Y G MATIGR A+ +++ + L+GF +W+ W
Sbjct: 331 --AGKTIALEVKGEKMKKPFHYHDKGDMATIGRSAAVANVKWPFKGH---LSGFPAWISW 385
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++ ++ +RNR V NWA T++F D SR+
Sbjct: 386 LVVHIFFLIGFRNRLSVFRNWAWTYLFFTDGSRL 419
>gi|156083326|ref|XP_001609147.1| NADH dehydrogenase [Babesia bovis T2Bo]
gi|154796397|gb|EDO05579.1| NADH dehydrogenase, putative [Babesia bovis]
Length = 560
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 135/240 (56%), Gaps = 20/240 (8%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V+C + +D + + YD+LVIA+GAE++TFGI GV E+A F++EV HA I +K
Sbjct: 142 VYCVSASDP-----NTRVNLPYDRLVIAVGAESNTFGIPGVAEHAYFMKEVEHANIIYQK 196
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 122
++ N + +PGISEEEK RLLH V+VGGGPTGVE +GE++ ++ + Q + V Y+
Sbjct: 197 IISNFEQASLPGISEEEKRRLLHLVIVGGGPTGVETTGEIA-ILLNKMAQSFPAVASYVK 255
Query: 123 VTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EV 175
VT++E + +L +F YA LS V ++ G V V + D T +
Sbjct: 256 VTIVEGGQRLLGTFSLGNSQYADRVLSAKDVNILLGKQVCAVGENDCTVKDATTGETVTM 315
Query: 176 PYGLLVWSTGVGPSTLVKS----LDLPKSPGGRIGIDEWLRVPSVQD--VFAVGDCSGYL 229
P G+++W++G+ LV + +P + +D+ L + D +FAVGDC L
Sbjct: 316 PCGIVLWASGLKQLELVDKVRAHFKVQNNPRALL-VDQHLALRGTGDHSIFAVGDCCKIL 374
>gi|424882372|ref|ZP_18306004.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WU95]
gi|392518735|gb|EIW43467.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WU95]
Length = 421
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 175/339 (51%), Gaps = 32/339 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL----MLSDVPGISE 77
+SY+ LV+A GA + FG + A L+ + A IRR++LL M SD P +
Sbjct: 96 LSYETLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMESD-PAV-- 152
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSF 135
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA + +L +F
Sbjct: 153 --RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGQRVLPTF 210
Query: 136 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
+ L YA L K GV + G V + ++ + + + T V +VW+ GV S +
Sbjct: 211 AEELSAYAQKALEKLGVEIHLGKPVTECNADGVKIGE-TFVASRTIVWAAGVTASPAARW 269
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
L + GR+ +++ L P + DVF VGD + + GK V P +A A++QG Y+ +
Sbjct: 270 LGVAADRAGRVVVEKDLSAPGLPDVFVVGDTASVMREDGKPV-PGIAPAAKQQGGYVAKV 328
Query: 255 LN-RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
+ RI G+ A PF Y H GS+ATIG+ A++D + K L G+L
Sbjct: 329 IRARI----SGKPTPA-------PFRYWHQGSLATIGKSAAIIDFGRIK------LKGWL 371
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|306845837|ref|ZP_07478405.1| NADH dehydrogenase [Brucella inopinata BO1]
gi|306273729|gb|EFM55567.1| NADH dehydrogenase [Brucella inopinata BO1]
Length = 424
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARKALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGHPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIGR A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGRGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|294853713|ref|ZP_06794385.1| NADH dehydrogenase [Brucella sp. NVSL 07-0026]
gi|294819368|gb|EFG36368.1| NADH dehydrogenase [Brucella sp. NVSL 07-0026]
Length = 424
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 177/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ + V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTWQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|302892457|ref|XP_003045110.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726035|gb|EEU39397.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 693
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 140/247 (56%), Gaps = 18/247 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YDKLVIA+G+ + G+ G+ ENA FL++++ A++IR +++ N L+ +P +EE
Sbjct: 266 FYVPYDKLVIAVGSVTNPHGVKGL-ENAFFLKDINDARKIRNQIIQNFELASLPTCPDEE 324
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEAN-EILSSFDD 137
+ RLL VV GGGPTGVEF+ EL D + D+ Q + +++ I V LI++ IL+++D+
Sbjct: 325 RKRLLSFVVSGGGPTGVEFAAELFDLLNEDLSQHFPRLLRNEISVHLIQSRGHILNTYDE 384
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGP 188
+ YA + ++ V L VK+V K+I DG+ E+P G +WSTGV
Sbjct: 385 TVSKYAEERFARDQVEVLTNSRVKEVQPDKIIFTQKQEDGSLITKELPIGFCLWSTGVSQ 444
Query: 189 ST----LVKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQ 242
+ L K L ++ + D LR+ + DV+A+GDCS + ++ L
Sbjct: 445 TQFCQKLAKKLSNAQTNQRALETDTHLRLNGSPLGDVYAIGDCSTVQNNVADHIITFLRS 504
Query: 243 VAERQGK 249
+A + GK
Sbjct: 505 LAWKHGK 511
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGG-RANSAK----DMELGDPFVYRHLGSMATI 289
T LPA AQ A +QG+YL NR+ + RAN + D + F Y HLGS+A I
Sbjct: 576 TSLPATAQRAHQQGQYLARKFNRMTRMNDALRANEIREGDVDAAVFKAFEYHHLGSLAYI 635
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ DL G +LAG L W V WRS Y + VS R R +A++W +FGR
Sbjct: 636 GN-SAIFDL-----GDGRNLAGGL-WAVYAWRSVYFAQSVSLRTRLLMAMDWTKRGLFGR 688
Query: 348 DI 349
D+
Sbjct: 689 DL 690
>gi|254444543|ref|ZP_05058019.1| cyclic nucleotide-binding domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198258851|gb|EDY83159.1| cyclic nucleotide-binding domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 673
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 26/337 (7%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
++ + +L + LGA+ I G++E+A ++ V A +R + +++ E
Sbjct: 107 IELRFRQLALCLGAKIDLSRIPGMQEHALIMQNVGDAMRLRAHFISRFEEANL-AYDPEI 165
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFDD 137
+ RLL V+VGGG +GVE +G+L D + R + + Y +V + I + L+ + + +L +
Sbjct: 166 RRRLLTFVIVGGGYSGVETAGQLID-LGRAINKHYKNVDWEDIRLVLVHSKDHLLPTLHR 224
Query: 138 RLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L Y +LSK GV ++ K V + K+ L+DGTE+ ++ + G P L+ LD
Sbjct: 225 NLGDYTAEKLSKRGVEMILTRRAKAVTANKIYLDDGTEIDTNTVICTVGNAPHPLILGLD 284
Query: 197 LPKS---PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253
+ GR+ + + L P + ++A GDC+ + G T P AQ A R+G L
Sbjct: 285 GIQGVELDRGRLKVGQDLAAPGIDWLWAAGDCASIPQDDGNTC-PPTAQFAMREGLLL-- 341
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
GK R ++ PF ++ +G +A+IG A+ ++ KG+ +GF
Sbjct: 342 -----GKNLAARIQNSST----KPFRFKAIGELASIGHLSAVAEI------KGMRFSGFF 386
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
+W +WRS YL ++ S + V V+W F RDI+
Sbjct: 387 AWWMWRSIYLMKLPSLERKIRVMVDWTLELFFPRDIN 423
>gi|72160836|ref|YP_288493.1| NADH dehydrogenase [Thermobifida fusca YX]
gi|71914568|gb|AAZ54470.1| NADH dehydrogenase [Thermobifida fusca YX]
Length = 458
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 169/355 (47%), Gaps = 31/355 (8%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+V C T E R L +YD LV+A GA + T I G+ E+ ++ V A +R
Sbjct: 104 RVECVTNEGERREL-------TYDYLVMAAGAVSRTLPIPGLAEHGIGIKTVQEAAYLRN 156
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DY 120
+L L ++D + + L+ V VGGG G E EL D + RD + Y + D
Sbjct: 157 HVLEQLNIADSTD-DPRVRRKALNFVFVGGGFAGAEAIAELED-LARDATRIYPSISIDD 214
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSG--VRLVRGIVKDVDSQKLILNDGTEVPY 177
+H LIEA + IL + A QL G VRL + VD Q++ L+DGTE
Sbjct: 215 LHFYLIEAADRILPEVGPEVGAKALQQLRNRGIDVRLSTFLESAVD-QRIKLSDGTEFEA 273
Query: 178 GLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
G LVW+ GV PS +V++ DLP P G + E+L V V++ FA GD + + G
Sbjct: 274 GTLVWTAGVKPSPVVQASDLPLGPKGHVDTTEYLTVRGVENAFAGGDNAQVPDGNGG-YY 332
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 297
P AQ A RQ L N I G K+++ P+ +++LG++A +G YK
Sbjct: 333 PPNAQNAVRQAPVLAD--NIIATLRG------KELK---PYRHKNLGAVAGLGMYKGAAQ 381
Query: 298 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ + L G +WL RS +L V ++ + V +W F RD + I
Sbjct: 382 V-----FGAVKLTGLPAWLAHRSYHLLAVPTFNRKMRVLADWTLGFFLRRDFASI 431
>gi|378764042|ref|YP_005192658.1| putative NADH dehydrogenase [Sinorhizobium fredii HH103]
gi|365183670|emb|CCF00519.1| putative NADH dehydrogenase [Sinorhizobium fredii HH103]
Length = 435
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 168/327 (51%), Gaps = 22/327 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LVIA GA + FG ++A L+ + A IR ++L ++V + K
Sbjct: 113 RVAYDYLVIATGARHTYFGNDAWADHAPGLKTIADATAIRARILSAFERAEVTDDPQSRK 172
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDR 138
RLL VVVGGGPTGVE +G + + + + + + + V LIEA E IL +
Sbjct: 173 -RLLTFVVVGGGPTGVELAGAIVELARKAIVRDFRRIDASSARVVLIEAGERILPTMPPA 231
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L A QL G +V G V + D + L DGTE+ ++W+ GV S K +
Sbjct: 232 LSARACEQLEGLGAEIVLGKAVAECDGSGVRLADGTEIGSACVLWAAGVMASRAAKWIGA 291
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P GR+ +DE L P +VF +GD + +++ G+ V P +A A++ G+Y +
Sbjct: 292 PADRAGRVKVDECLNPPGHDEVFVIGDTALAIDAAGRPV-PGVAPAAKQMGRYAARAI-- 348
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ G RA PF YR G++ATIGR A+ DL + L+G+ +WLV
Sbjct: 349 LDHMAGRRAA---------PFRYRDFGNLATIGRKAAVADLGKA------WLSGYAAWLV 393
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFV 344
W A+L +V +RNR V ++WA +V
Sbjct: 394 WNFAHLWFLVGFRNRLVVFLDWALAYV 420
>gi|358396898|gb|EHK46273.1| hypothetical protein TRIATDRAFT_80673 [Trichoderma atroviride IMI
206040]
Length = 693
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 147/247 (59%), Gaps = 18/247 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLV+A+G+ + G+ G+ ENA FL++++ A+ IR K++ NL L+ +P +++
Sbjct: 265 RFYVPYDKLVVAVGSSTNPHGVKGL-ENAFFLKDINDARMIRNKVIQNLELACLPTTTDD 323
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEAN-EILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + + +++ I V +I++ IL+++D
Sbjct: 324 ERKRLLSFVVSGGGPTGVEFAAELFDLLNEDLTRHFPRLLRNEISVHIIQSRGHILNTYD 383
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 187
+ + YA + ++ + L VK+V K+I + DG+ E+P G +WSTGV
Sbjct: 384 ETVSKYAEERFNRDQIEVLTNSRVKEVQPDKIIFSQKQEDGSVLTKELPIGFCLWSTGVS 443
Query: 188 PST----LVKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
P++ L K L ++ + D LR+ + DV+A+GDCS + ++++ L
Sbjct: 444 PTSLSQKLAKKLGDVQTNRHALETDTHLRLNGAPLGDVYAIGDCSTVQNNVAESIVTFLR 503
Query: 242 QVAERQG 248
+A ++G
Sbjct: 504 NLAWKRG 510
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGR-ANSAKDMELG----DPFVYRHLGSMATI 289
T LPA AQ A +QG YL N++ + AN +D +L F YRHLGS+A I
Sbjct: 576 TSLPATAQRAHQQGSYLAHKFNKMARISDAMLANDIRDGDLDAAIYKAFEYRHLGSLAYI 635
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ DL G S+AG L W V WRS Y + VS+R R +A++W +FGR
Sbjct: 636 GN-SAVFDL-----GDGWSMAGGL-WAVYAWRSVYFAQSVSFRTRSLMAMDWMKRGLFGR 688
Query: 348 DI 349
D+
Sbjct: 689 DL 690
>gi|222147650|ref|YP_002548607.1| NADH dehydrogenase [Agrobacterium vitis S4]
gi|221734638|gb|ACM35601.1| NADH dehydrogenase [Agrobacterium vitis S4]
Length = 425
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 167/341 (48%), Gaps = 36/341 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISEE 78
ISYD LV+A GA + FG + A L+ + A IRR+LLL ++ P + E
Sbjct: 96 ISYDTLVLATGATHAYFGRDEWEPVAPGLKTLEDATTIRRRLLLAFEQAETTSDPAMREA 155
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFD 136
LL +VG GPTGVE +G +++ + + + + + V L+EA + +L SF
Sbjct: 156 ----LLTFTIVGAGPTGVELAGIIAELAHKTLPKEFRAIDTRRTKVILVEAGQRVLPSFA 211
Query: 137 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEV-----PYGLLVWSTGVGPSTL 191
L YA L GV + G +DG ++ P +VW+ GV S
Sbjct: 212 PELSVYAQGVLENLGVEVRLG-----QPVTQCSSDGVQIGEQFTPSRTIVWAAGVQASAA 266
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+ L +P GR+ + + L P + DVF +GD + ++ T +P +A A++QG Y+
Sbjct: 267 SRWLSVPADRAGRVVVGKDLTAPEMPDVFVIGDTASVMQGN-NTPVPGIAPAAKQQGAYV 325
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
++ K G+ A PF YRH GS+ATIG+ A+VD + K L G
Sbjct: 326 AKVIKARLK---GKPAPA-------PFHYRHQGSLATIGQSAAIVDFGKVK------LTG 369
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 370 SLAWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|358378153|gb|EHK15835.1| hypothetical protein TRIVIDRAFT_214604 [Trichoderma virens Gv29-8]
Length = 640
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 146/247 (59%), Gaps = 18/247 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL++++ A+ IR K++ NL L+ +P S++
Sbjct: 212 RFYVPYDKLVIAVGSATNPHGVKGL-ENAFFLKDINDARMIRNKVIQNLELACLPTTSDD 270
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEAN-EILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + + +++ I V +I++ IL+++D
Sbjct: 271 ERKRLLSFVVSGGGPTGVEFAAELYDLLNEDLTRHFPRLLRNEISVHIIQSRGHILNTYD 330
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 187
+ + YA + ++ V L VK+V K+I + DG+ E+P G +WSTGV
Sbjct: 331 ETVSKYAEERFARDQVEVLTNSRVKEVLPDKIIFSQKQEDGSVITKELPIGFCLWSTGVS 390
Query: 188 PSTLVKSL--DLPKSPGGR--IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
P+ L + L L S R + D LR+ + DV+A+GDCS + +++ L
Sbjct: 391 PTALSQKLAKKLGDSQTNRHALETDTHLRLNGAPLGDVYAIGDCSTVQNNVADSIVSFLR 450
Query: 242 QVAERQG 248
++A +G
Sbjct: 451 KLAWSRG 457
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGR-ANSAKDMELG----DPFVYRHLGSMATI 289
T LPA AQ A +QG+YL N++ K AN +D +L F YRHLGS+A I
Sbjct: 523 TSLPATAQRAHQQGQYLAHKFNKMAKISDAMLANDIRDGDLDAAVYKAFEYRHLGSLAYI 582
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ DL +G S+AG L W V WRS Y + VS+R R +A++W +FGR
Sbjct: 583 GN-SAVFDL-----GEGWSMAGGL-WAVYAWRSVYFAQSVSFRTRSLMAMDWMKRGLFGR 635
Query: 348 DI 349
D+
Sbjct: 636 DL 637
>gi|306840603|ref|ZP_07473357.1| NADH dehydrogenase [Brucella sp. BO2]
gi|306289403|gb|EFM60635.1| NADH dehydrogenase [Brucella sp. BO2]
Length = 441
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 115 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARPQ 174
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 175 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 232
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSTYARKALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF YRH G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYRHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
>gi|343084400|ref|YP_004773695.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Cyclobacterium marinum DSM 745]
gi|342352934|gb|AEL25464.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Cyclobacterium marinum DSM 745]
Length = 440
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 173/331 (52%), Gaps = 31/331 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN----LMLSDVPGISE 77
I YD L++A+GA+ + FG+ + EN+ ++ V A IR K++ N + ++D+
Sbjct: 105 IDYDYLILAMGADTNYFGMKNIMENSIPMKSVSEALFIRNKIISNYERAINIADL----- 159
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 135
E++ L++ V+VGGGPTGVE +G +++ + + Y + D + V LIE +L+
Sbjct: 160 EKRKSLMNVVIVGGGPTGVELAGAMAELRNKVFPKDYPQLNFDNMKVVLIEMGPSLLAGM 219
Query: 136 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
A L V L+ V++ D +I+N ++ L+W+ G+ P+ +
Sbjct: 220 SASSGQKAKEYLESLKVDVLLNTAVENYDGLNVIINGEEKLKTNTLLWAAGIAPNGIEGI 279
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFS 253
+D K GR+ ++E+ V + ++++A+GD C L K P +AQVA +Q L +
Sbjct: 280 VDTQKFKNGRLLVNEYNLVHNSKNIYALGDLCLQQLPDYPKG-HPQVAQVAIQQADNLAN 338
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
N +G+ GRA A F Y+ LGSMAT+GR A+VDL + G L
Sbjct: 339 --NFLGQL-KGRAPKA--------FRYKDLGSMATVGRKLAVVDL------PFIKFQGVL 381
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+WL W +L ++ +NR ++ ++W+ ++
Sbjct: 382 AWLTWLFVHLMAILGVKNRIFIFLDWSWNYL 412
>gi|384564809|ref|ZP_10011913.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
glauca K62]
gi|384520663|gb|EIE97858.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
glauca K62]
Length = 431
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 167/346 (48%), Gaps = 26/346 (7%)
Query: 9 TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 68
T +R + + ++ YD+LV+A+GA + + G+ E+ + A +R +L L
Sbjct: 87 TATVRPMAGPELELDYDELVLAVGATSKLLPVPGLAEHGIGFNSLAEAAHLRDHVLRQLE 146
Query: 69 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE 127
++ + +S L V VGGG TGVE EL D + DV + Y + + + L+E
Sbjct: 147 IASATPDPKLRRSALTF-VFVGGGYTGVEAIAELQDMAV-DVLEGYPEIDRSEMRWVLVE 204
Query: 128 A-NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTG 185
A + IL + L ATT+L+ G+ + G +++ +++ + L+DGT++P LVW G
Sbjct: 205 AMDRILGTVSADLAELATTELTARGIDIRTGTLLESAENRVMQLSDGTKLPADTLVWVAG 264
Query: 186 VGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245
P ++ L LP GR+ +D+ +RV ++++ GDC+ + P AQ A
Sbjct: 265 TRPQPILGELGLPVDERGRLVVDDTMRVDGHANIWSAGDCAAVPDPEKGGTCPPTAQHAV 324
Query: 246 RQGKYLFS--LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303
RQ + L LL G+A G PF Y G T+G+ KA+ E
Sbjct: 325 RQAQQLGENLLLTLRGRA-------------GKPFRYNSRGEFVTLGKNKAV------GE 365
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G + G L+W + R+ Y T++ +W V +WA FG D+
Sbjct: 366 VLGHKVDGVLAWTLRRAYYATQIPTWNRTVRVLGDWAVGMPFGHDV 411
>gi|237840755|ref|XP_002369675.1| mitochondrial alternative NADH dehydrogenase 1 [Toxoplasma gondii
ME49]
gi|76561724|gb|ABA44355.1| mitochondrial alternative NADH dehydrogenase 1 [Toxoplasma gondii]
gi|211967339|gb|EEB02535.1| mitochondrial alternative NADH dehydrogenase 1 [Toxoplasma gondii
ME49]
gi|221503317|gb|EEE29015.1| pyridine nucleotide-disulphide oxidoreductase, putative [Toxoplasma
gondii VEG]
Length = 618
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 91/431 (21%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV C++ + + W+ SYD LV+A GA+ +TFG+ GVKENA F++E+ A+ +R
Sbjct: 184 KVRCQSTHGKAQDAREWE--ESYDYLVVAAGADVNTFGVPGVKENAFFVKELEDARRLRS 241
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
L + + VPG+SEEEK +LLH VVVG GPTGVE + E+ DF + + ++ +
Sbjct: 242 ALFDVIETASVPGVSEEEKKKLLHFVVVGAGPTGVEVAAEIDDFFQAEGATHFPQLRPLV 301
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSG-VRL-----VRGIVKDVDSQKLILNDGT- 173
+T++E +L+++++ ++ +A L ++ V L V G+ D + DG
Sbjct: 302 RITVVEMLPTVLAAYNNDVQAFAKRLLEENPRVDLCLQSQVVGVGPDSVKVRTKRADGQV 361
Query: 174 ---EVPYGLLVWSTGVGPSTLVKSLDLPK-----------SPGGRIGIDEWLRVPSVQDV 219
E+P GLLVW++G+ + LDL + SP I +D+ ++V + V
Sbjct: 362 EEKEMPCGLLVWASGIKSPKVC--LDLARKTAELREAQQQSP--VILVDQQMKVRGCEGV 417
Query: 220 FAVGDC--------------------------SGYLESTGK---TVLPALA--------- 241
+A+GDC + +LE TV P LA
Sbjct: 418 YALGDCCRLSPPPLVQHADTLYEAATANGAASTDWLEREAPKLSTVFPQLASSKYDFSQK 477
Query: 242 ----QVAERQGKYLFSLLNRIGKAGGGRANSAK-----------------DMELGDPFVY 280
Q+ + Q L + ++ +A A +AK + FV
Sbjct: 478 PRQTQMTKEQFVKLLADIDAAYRAPAPTAQNAKQAGRYLAQTFNAFPSVEEKRRAPAFVN 537
Query: 281 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 340
+ G++ +G +A D+ E L G + L+W++AYL ++ N W
Sbjct: 538 QTRGALVYLGHGQAAADI----EGWRTFLGGAATLLLWKAAYLQMQLTLHNAVACLGGWL 593
Query: 341 TTFVFGRDISR 351
T + GR + R
Sbjct: 594 RTSLVGRAVCR 604
>gi|241205463|ref|YP_002976559.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859353|gb|ACS57020.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 421
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 174/341 (51%), Gaps = 32/341 (9%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL----MLSDVPGI 75
+SYD LV+A GA + FG + A L+ + A IRR+LLL M SD P +
Sbjct: 94 MTLSYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRLLLAFEKAEMESD-PAV 152
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 133
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L
Sbjct: 153 ----RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLP 208
Query: 134 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 192
+F + L YA L K GV + G V + ++ + + + T V +VW+ GV S
Sbjct: 209 TFAEELSAYAQKALEKLGVEIHLGKPVTECNADGVKIGE-TFVASRTIVWAAGVTASPAA 267
Query: 193 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
+ L + GR+ +++ L P + +VF VGD + + GK V P +A A++QG Y+
Sbjct: 268 RWLGVAADRAGRVVVEKDLSAPGLPEVFVVGDTASVMREDGKPV-PGIAPAAKQQGGYVA 326
Query: 253 SLLN-RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
++ RI G+ A PF Y H GS+ATIG+ A++D + K L G
Sbjct: 327 KVIRARI----SGKPTPA-------PFRYWHQGSLATIGKSAAIIDFGRIK------LKG 369
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+++W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 370 WIAWWIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|344203700|ref|YP_004788843.1| NADH dehydrogenase (ubiquinone) [Muricauda ruestringensis DSM
13258]
gi|343955622|gb|AEM71421.1| NADH dehydrogenase (ubiquinone) [Muricauda ruestringensis DSM
13258]
Length = 438
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 167/337 (49%), Gaps = 31/337 (9%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL---MLSDVPGISE 77
+I YD LV+A G+E + FG +K ++ + + +R +L N +L+D
Sbjct: 102 EIFYDYLVVATGSETNFFGNKNIKAKGMAMKTIPQSLNLRSLILENFEQALLTD----DL 157
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSF 135
E+ L++ V+VGGGPTGVE +G L++ + + Y + + L++ + IL +
Sbjct: 158 HERDALMNFVIVGGGPTGVELAGALAEIKKGILPKDYPDLDTRRAQINLVQGGDRILPAM 217
Query: 136 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
++ A L + GV + + I V D D +K+ N T LVW+ GV L K
Sbjct: 218 SEKASEKAEKFLEELGVNVWKNIRVTDYDGKKVTTNTKTIFEAETLVWAAGVKAVGL-KG 276
Query: 195 LDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
LD+ + S R+ ++E+ ++ ++DVFA+GD + + P +AQ A +QG+ L
Sbjct: 277 LDVRELLSRDNRLKVNEFHQIVGLEDVFAIGDVAQMVTEEFPHGHPMMAQPAIQQGRNL- 335
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
G D + PFVY+ GSMAT+GR KA+VDL + G
Sbjct: 336 ----------GDNLVLLMDGKPMKPFVYKDKGSMATVGRNKAVVDLPK------FRFQGV 379
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRD 348
+W VW +L ++ +RNR V +NW ++ F R+
Sbjct: 380 FAWFVWMFVHLYFLIGFRNRVVVFINWVYNYIRFDRE 416
>gi|269793685|ref|YP_003313140.1| NADH dehydrogenase, FAD-containing subunit [Sanguibacter keddieii
DSM 10542]
gi|269095870|gb|ACZ20306.1| NADH dehydrogenase, FAD-containing subunit [Sanguibacter keddieii
DSM 10542]
Length = 432
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 154/328 (46%), Gaps = 30/328 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM-LSDVPGISEEEK 80
I +D L++A G + FG G KENA + A +IR L + L + PG E
Sbjct: 100 IDFDYLIVATGVTTNFFGTPGAKENAFPMYSRSQAVKIRDALFVRLEEAASTPGTDEG-- 157
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDR 138
L +VVGGG TGVE +G L++ +R Y + D V +++ E+L +F R
Sbjct: 158 ---LRIIVVGGGATGVEVAGALAELRTAGLRPAYPEIHGDAFEVKIVQRGTELLKAFPQR 214
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
LR Y +L + GV L G V +V + ++L DGT++ L +WSTGV P V + DL
Sbjct: 215 LRDYTADELRRRGVALHLGAGVAEVHTDGVLLTDGTKLRSDLTIWSTGVRPHEEVDAWDL 274
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P+ G R+ + L+VP VF VGD + + + PA+ Q ++ K + +L+
Sbjct: 275 PRGEGDRVAVGRDLQVPGRPGVFVVGDLAITPDGLPQLAQPAI-QSGKQAAKNVLALVE- 332
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
GR + P Y G+MA IGR A+ D+ + L +WL
Sbjct: 333 ------GRQTT--------PLRYFDKGTMAVIGRRAAIADIVGK-----VQLTRGSAWLA 373
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
W ++ ++ RNR T + F
Sbjct: 374 WLFVHIMGLIGPRNRLTTLAGLVTRYGF 401
>gi|116329586|ref|YP_799305.1| NADH dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116332475|ref|YP_802192.1| NADH dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116122479|gb|ABJ80372.1| NADH dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116127342|gb|ABJ77434.1| NADH dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 422
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 173/333 (51%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALRIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L++FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLTTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D++ + + L + + ++W+ GV +T+ +L +
Sbjct: 219 EFTKKRLESRGVEVLTGTRVIDINERGVQLEEKM-ITTQTVIWAAGVQANTIASTLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRGGRVIVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + F Y GSMATIGR A+ + L + G W W
Sbjct: 334 ---GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQMGV------LRMRGLFGWFAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|393783999|ref|ZP_10372168.1| hypothetical protein HMPREF1071_03036 [Bacteroides salyersiae
CL02T12C01]
gi|392667658|gb|EIY61165.1| hypothetical protein HMPREF1071_03036 [Bacteroides salyersiae
CL02T12C01]
Length = 434
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 163/344 (47%), Gaps = 23/344 (6%)
Query: 5 CET--VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
CE V E + LE I YD LVIA G + FG + + E L+ A R +
Sbjct: 86 CEARRVIPEQKLLETSIGAIDYDYLVIATGCYTNYFGNNKMAEKTMSLKTTAEALYNRNQ 145
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYI 121
+L + + +E+ +L+ ++VGGG TG+E SG L++ + Q Y + +
Sbjct: 146 VLESFEKAQ-NTTDPKEREKLMTFIIVGGGATGIELSGALAEMRKFILPQDYPDLDMKKM 204
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
+ LI+A + +LS+F ++ L K GV + V V D ++ L L DGT +P
Sbjct: 205 RIVLIDAGSRLLSAFSEKSSEEVRDYLQKKGVEVKVNSKVVDYENDLLTLGDGTVLPSAN 264
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+ W GV ++L PG R+ +D + +V +FA+GD + + P
Sbjct: 265 IYWVAGVKANSLEGLPADAYGPGNRLKVDTFNKVSGNDHIFAIGDTALMISEDYPRGHPQ 324
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
+ Q A +Q + L LN I K + PFVY + GSMAT+GR A+V+L
Sbjct: 325 VVQPAIQQARLLVRNLNNIEKGLPLK-----------PFVYHNKGSMATVGRNNAIVEL- 372
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
K + GFL+W VW +L +V +N+ ++ +W ++
Sbjct: 373 -----KNIRFGGFLAWAVWLFIHLMSIVGVKNKLFIFTDWMWSY 411
>gi|153010802|ref|YP_001372016.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum anthropi ATCC 49188]
gi|404317738|ref|ZP_10965671.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum anthropi CTS-325]
gi|151562690|gb|ABS16187.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ochrobactrum anthropi ATCC 49188]
Length = 422
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 175/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ISYD LV+A GA + FG + A L+ + A IRR+LLL ++ E ++
Sbjct: 98 EISYDMLVLATGARHAYFGNDQWEALAPGLKALEDATTIRRRLLLAFERAERES-DEAKR 156
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDR 138
LL +VGGGPTGVE +G +++ + + + ++ V L+EA IL++F +
Sbjct: 157 QALLTFAIVGGGPTGVELAGIIAELAKQTIWPEFRNIDTRQTRVMLLEAGPRILAAFPED 216
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA L K GV + GI VKD+ ++ + + + +P +W+ GV S L+
Sbjct: 217 LSSYALKALEKLGVEVRLGIPVKDITAEGVTVGE-EFIPCRTAIWAAGVAASPAATWLNA 275
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL-N 256
GR+ + L VP +D+F +GD + GK V P +A A++QG Y+ ++ +
Sbjct: 276 ESDRAGRVKVLSNLNVPGHEDIFVIGDTAWVEGPDGKPV-PGIAPAAKQQGAYVAKVIKS 334
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
RI K + PF Y+H G++ATIGR A+VD+ + K L G ++W
Sbjct: 335 RI---------EGKTPPM--PFRYKHQGNLATIGRGAAVVDMGRFK------LKGLIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYISGQHSARL 413
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRD--VRQRYSHVKD----YIHVTLIEANEILS 133
+ R H VVVG G G++ +L + +R + QR H+ + T++ +EI
Sbjct: 3 EKRAPHLVVVGAGFGGLQLIHDLRNVDVRITLIDQRNHHLFQPLLYQVATTILATSEIAW 62
Query: 134 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTG 185
+RH + V + G V DVD++ +++L +GTE+ Y +LV +TG
Sbjct: 63 P----IRHLFK---DRKEVTTLLGTVTDVDTEHRQVLLENGTEISYDMLVLATG 109
>gi|305665363|ref|YP_003861650.1| putative NADH dehydrogenase [Maribacter sp. HTCC2170]
gi|88710118|gb|EAR02350.1| putative NADH dehydrogenase [Maribacter sp. HTCC2170]
Length = 425
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 165/328 (50%), Gaps = 24/328 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD LV+A G + + FG + +++ A ++ V A IR +L N +D E E+
Sbjct: 100 LSYDYLVMATGTKTNFFGNNNIEKYAMSMKNVPQALNIRSLMLQNFEKAD-DCEDENERR 158
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRL 139
LL+ ++G GPTGVE +G ++ + Y H+ + + L E A +L +
Sbjct: 159 SLLNFCIIGAGPTGVELAGAFAELKNNVFPKDYKHLNISEMQIHLFEGAARVLPPMSETA 218
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDL 197
A L + GV + + IV+D D + ++L + + +W+ GV G + + ++
Sbjct: 219 SRKAIKFLDRLGVNVHLNTIVQDYDGETMVLKNKETIRTKNFIWTAGVTGAAIDGFNGEV 278
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLN 256
++ R ++ + +V ++VFA+GD + Y+E+ T P +AQ A +QG++L L
Sbjct: 279 LENRLNRFKVNAFSQVEGYKNVFAIGDIA-YMETETYPKGHPQVAQPAIQQGEHLAKNL- 336
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
N KD + PF Y G+MAT+GR KA+VDL+ K GF +W
Sbjct: 337 ---------KNLVKDKNMV-PFKYYDKGTMATVGRNKAVVDLKNAK------FGGFFAWF 380
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+W +L +V +RNR V NWA ++
Sbjct: 381 IWMFVHLMALVGFRNRVIVFFNWAYNYI 408
>gi|408370120|ref|ZP_11167899.1| NADH dehydrogenase (ubiquinone) [Galbibacter sp. ck-I2-15]
gi|407744595|gb|EKF56163.1| NADH dehydrogenase (ubiquinone) [Galbibacter sp. ck-I2-15]
Length = 436
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 172/345 (49%), Gaps = 29/345 (8%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
+ E + LE + YD LV+A G++ + FG ++ N+ ++ V A +R +L N
Sbjct: 86 IDPEAKKLETNIGPLKYDYLVLATGSKTNFFGNKEIELNSMIMKTVPEALNLRSLILQNF 145
Query: 68 ---MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHV 123
+L+D S +E+ L++ V+VGGGPTGVE +G L++ + + Y + +
Sbjct: 146 EKALLTD----SLDEQDALMNFVIVGGGPTGVELAGALAEIKKGILPKDYPDLDTRRAQI 201
Query: 124 TLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLV 181
++++++ +L + A L K GV + + +V D + N ++
Sbjct: 202 NIVQSSDRVLDGMSEVASRKAEEFLEKMGVNIWKDTLVTGYDGDIVSTNSELTFRTATMI 261
Query: 182 WSTGVGPSTLVKSLDLPKS--PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
W+ GV L+ L + PG R+ ++E+L+V +++FA+GD + P
Sbjct: 262 WAAGV-EGALIDGLKTSECLLPGNRLKVNEFLQVSHYKNIFAIGDIACMTSEDYPRGHPM 320
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
+AQVA +QG+ L L +I + D++ PFVY+ G+MATIGR KA+VDL
Sbjct: 321 VAQVAMQQGRNLGDNLLKI-------LENKTDLK---PFVYKDKGTMATIGRNKAVVDLP 370
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
K GF +W VW +L ++ +RNR V VNW ++
Sbjct: 371 SWK------FQGFFAWFVWMFVHLLSLIGFRNRAIVFVNWVYNYI 409
>gi|333031504|ref|ZP_08459565.1| NADH dehydrogenase (ubiquinone) [Bacteroides coprosuis DSM 18011]
gi|332742101|gb|EGJ72583.1| NADH dehydrogenase (ubiquinone) [Bacteroides coprosuis DSM 18011]
Length = 455
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 176/351 (50%), Gaps = 42/351 (11%)
Query: 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL 67
V E + L+ K+ YD L++A G+ ++ FG ++E A ++ + A +R LL N
Sbjct: 88 VNAERKILQTSIGKLHYDYLILAAGSVSNFFGNKSIEEKAIPMKTMQEALGLRSTLLSNF 147
Query: 68 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY------- 120
+ + ++EE+ LL+ V+VGGG TGVE +G LS+ +R+ KDY
Sbjct: 148 ERA-LTCATQEERDELLNIVIVGGGATGVEIAGALSEM------KRFVFPKDYPDMSPDL 200
Query: 121 IHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYG 178
+++ L+EA+ +L ++ A L K GV ++ +++ ++ L+DG+ +
Sbjct: 201 LNIHLVEASSRLLGGMSEKSSANAAKYLQKMGVHIMLNTRLEEYENNTAKLSDGSSISTR 260
Query: 179 LLVWSTGVGPSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTV 236
L+W +GV S +K +D G RI ++E+ V +QDVF +GD C +S
Sbjct: 261 SLIWVSGVSASP-IKYIDGDHLGRGKRIIVNEYNAVKGLQDVFCIGDQCIQMTDSKYPNG 319
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---PFVYRHLGSMATIGRYK 293
P LAQVA +Q + L A + K E PF Y+ GSMAT+GR K
Sbjct: 320 HPQLAQVAIQQARNL--------------AENIKHKESNKGLTPFKYKDYGSMATVGRKK 365
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
A+ DL + ++ G+ +W +W +L ++ RN+ V +NW ++
Sbjct: 366 AVADLGK------CNVGGWTAWAMWLVVHLKSILGVRNKIIVLLNWMWNYI 410
>gi|385210243|ref|ZP_10037111.1| NADH dehydrogenase, FAD-containing subunit [Burkholderia sp. Ch1-1]
gi|385182581|gb|EIF31857.1| NADH dehydrogenase, FAD-containing subunit [Burkholderia sp. Ch1-1]
Length = 435
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 163/340 (47%), Gaps = 30/340 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ +YD LV+A GA + FG A L+ + A IR ++L ++ ++
Sbjct: 99 MRQTYDTLVLATGATHAYFGHDEWGAFAPGLKTLEDATTIRGRILAAFEEAERTS-DPQQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 134
++ L V++GGGPTGVE +G ++ D + RD R S V LIEA +LS
Sbjct: 158 RAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGPRLLSV 214
Query: 135 FDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
F L Y L K GV +V G S ++ G + +VW+ GV S +
Sbjct: 215 FPKDLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGKPLSAKTIVWAAGVQASPAARW 274
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
L GR+ + L V +VFA+GD + + GK V P +A A++QGKY+ +L
Sbjct: 275 LGAASDRAGRVVVGPDLTVAGRPEVFAIGDTASCTMADGKPV-PGIAPAAKQQGKYVANL 333
Query: 255 LNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+ R GK G PF YRH G++ATIGR A++D+ + K L G
Sbjct: 334 IGRRLKGKPADG------------PFKYRHQGNLATIGRSLAVIDMGRVK------LRGA 375
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W +W+ A++ ++ RNR VA++W G SRI
Sbjct: 376 FAWWIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|390942738|ref|YP_006406499.1| NADH dehydrogenase, FAD-containing subunit [Belliella baltica DSM
15883]
gi|390416166|gb|AFL83744.1| NADH dehydrogenase, FAD-containing subunit [Belliella baltica DSM
15883]
Length = 442
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 168/329 (51%), Gaps = 27/329 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A+GA+ + FG+ +++++ ++ V A IR K++ N + G E E+
Sbjct: 109 VDYDYLVLAMGADTNYFGLENIEKHSIPMKTVSEALFIRNKIISNYETAINIG-KENERK 167
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDRL 139
+++ V+VGGGPTGVE +G +++ + Y + + V LIEA +L S ++
Sbjct: 168 PIMNVVIVGGGPTGVELAGAVAELRNNVFPKDYPELNFKNMKVVLIEAGTHLLLSMSEQA 227
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+ A T L K GV ++ V D D K+ L + L+W+ G+ + + ++
Sbjct: 228 KTKARTYLEKLGVIVMTDTQVLDYDGNKVDLKGKESIETKTLLWAAGIKANHIEGVIEGQ 287
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
P GR+ ++E+ R+ +++FA+GD + + + P +AQVA +Q L
Sbjct: 288 TLPNGRMIVNEFNRLKESENIFALGDIAISITEKFERGHPQVAQVALQQADNL------- 340
Query: 259 GKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
AN+ + P F Y+ LGSMATIGR A+VDL + G L+W
Sbjct: 341 -------ANNLLAEKRNKPWKRFKYKDLGSMATIGRKLAVVDL------PFIKFQGLLAW 387
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+ W +L ++ +N+ ++ +NW+ ++
Sbjct: 388 MTWLFVHLMAILGVKNKLFIFLNWSWNYL 416
>gi|85105087|ref|XP_961885.1| hypothetical protein NCU05225 [Neurospora crassa OR74A]
gi|28923468|gb|EAA32649.1| hypothetical protein NCU05225 [Neurospora crassa OR74A]
Length = 673
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 19/249 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ EN FL++++ A++IR K++ NL LS +P S+E
Sbjct: 244 RFYVPYDKLVIAVGSTTNPHGVKGL-ENCHFLKDINDARQIRNKIIQNLELSCLPTTSDE 302
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + +++ I V LI++ + IL+++D
Sbjct: 303 ERKRLLSFVVCGGGPTGVEFAAELFDLLNEDLTLHFPRLLRNEISVHLIQSRDHILNTYD 362
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DG-----TEVPYGLLVWSTGV 186
+ + YA + S+ V LV V +V + ++ DG E+P G +WSTGV
Sbjct: 363 EAVSKYAEDRFSRDQVDVLVNSRVAEVRPESILFTQRGPDGKTTVTKELPMGFCLWSTGV 422
Query: 187 GPSTLVKSLDLPKSPGGR----IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPAL 240
+ K + P + D LR+ + DV+A+GDCS + ++ L
Sbjct: 423 SQAEFCKRISRQLGPAQTNRHALETDTHLRLNGTPLGDVYAIGDCSTIQNNVADHIITFL 482
Query: 241 AQVAERQGK 249
+A + GK
Sbjct: 483 RNLAWKHGK 491
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 18/124 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMA 287
T LPA AQ A +QG+YL N++ +A G SA ++ GD F YRHLGS+A
Sbjct: 556 TSLPATAQRAHQQGQYLAHKFNKLARAAPGL--SANEIHEGDLDAAVYKAFEYRHLGSLA 613
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG A+ D G + +G L W V WRS Y T+ VS R R +A++W +F
Sbjct: 614 YIGN-SAVFDW-----GDGWNFSGGL-WAVYAWRSIYFTQSVSLRTRVLMAMDWGKRALF 666
Query: 346 GRDI 349
GRD+
Sbjct: 667 GRDL 670
>gi|104781715|ref|YP_608213.1| PNDR family NADH dehydrogenase [Pseudomonas entomophila L48]
gi|95110702|emb|CAK15415.1| putative NADH dehydrogenase, PNDR family [Pseudomonas entomophila
L48]
Length = 430
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 170/334 (50%), Gaps = 22/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA + FG +++A L+ + A +R ++L ++ + E++
Sbjct: 102 VGYDTLVLATGATHAYFGHDEWEQHAPGLKTLEDAATLRGRILSAFEEAERSS-NPAERA 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFDDRL 139
L V++GGGPTGVE +G +++ + + + + V LIEA +L F ++L
Sbjct: 161 ALQTFVIIGGGPTGVELAGTIAELAKGTLARDFRAIDPRATRVVLIEAGTRLLPVFPEKL 220
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
Y L K GV + G V D ++ +++ G + ++W+ GV S + L
Sbjct: 221 SDYTRRALEKLGVEVALGAPVTDCSAEGVVVA-GKPLQARTIIWAAGVQASPAARWLGAE 279
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L VP ++F +GD + + GK V P +A A++QGKY+ +L+ R
Sbjct: 280 SDRAGRVLVRPDLSVPGRPEIFVIGDTAASAMADGKYV-PGIAPAAKQQGKYVANLVKR- 337
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
K + +PF Y+H G++ATIGR A++D+ + ++L G ++W +W
Sbjct: 338 ---------HLKGKPVDEPFKYKHQGNLATIGRSLAVIDMGR------ITLRGAIAWWIW 382
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ A++ ++ RNR VA++W G SR+
Sbjct: 383 KLAHIYFLIGVRNRLSVALSWVWNHSVGYRGSRL 416
>gi|111022305|ref|YP_705277.1| dehydrogenase [Rhodococcus jostii RHA1]
gi|110821835|gb|ABG97119.1| dehydrogenase [Rhodococcus jostii RHA1]
Length = 717
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 42/339 (12%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL----MLSDVPGISEEE 79
YD L+++ GA+ S FG E+A ++ + A E+R ++L + SD P E
Sbjct: 110 YDSLIVSAGAQQSYFGNDHFAEHAPGMKTIDDALELRGRILGAFERAEICSDPP-----E 164
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH--VKDYIHVTLIEANEILSSFDD 137
+++LL VVVG GPTGVE +G++++ R + Y + +D + L A +L F
Sbjct: 165 RAKLLTFVVVGAGPTGVEMAGQIAELAHRTLVDVYRNFDTRDARIILLDAAPTVLPPFGL 224
Query: 138 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLV 192
L + A L + GV + G +V DVD+ L + D + VWS GV + L
Sbjct: 225 NLGNKAAAALEELGVEIQLGTMVTDVDADGLTVRDSDGEHHRIDAACKVWSAGVAANPLG 284
Query: 193 KSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
L DL ++ GR+ +++ L +P +VF VGD K LP +AQVA +
Sbjct: 285 AQLAAQSGADLDRA--GRVTVEDDLTLPGHPNVFVVGDM------MAKDRLPGVAQVAIQ 336
Query: 247 QGKYLFSLL-NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 305
G+Y + + A R S + PF YR GSMATI R+KA+ + N E
Sbjct: 337 GGRYAAQQIKTELTAATKDRTTSER-----APFRYRDKGSMATIARFKAVTKV-GNPE-- 388
Query: 306 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L G L+W++W + ++ VV +R+R ++W TF+
Sbjct: 389 ---LTGVLAWILWLAVHVVYVVGFRSRLATLISWTCTFL 424
>gi|242080517|ref|XP_002445027.1| hypothetical protein SORBIDRAFT_07g003070 [Sorghum bicolor]
gi|241941377|gb|EES14522.1| hypothetical protein SORBIDRAFT_07g003070 [Sorghum bicolor]
Length = 581
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 2 KVHCETVTDELRTLE-PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
K+HC + LE +F + YD LV+A+GA +TF GV EN FL+EV AQ+IR
Sbjct: 142 KIHCRSNVGT--NLEGNGEFSVDYDYLVVAVGARTNTFNTPGVVENCHFLKEVEDAQKIR 199
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P ++EEE+ + LH VVVGGGPTGVEF+ L DF+ D+ + Y V+
Sbjct: 200 RSVMDCFERASLPFLNEEERKKNLHFVVVGGGPTGVEFAASLHDFVTEDLSKLYPSVQHL 259
Query: 121 IHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---E 174
+ ++LIE A+ IL+ FD R+ ++A + + G+ + G +VK + N T
Sbjct: 260 VKISLIEAADHILTMFDKRITNFAEDKFGRDGIDVKTGYKVVKVSKDDITMQNPATGDIS 319
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
VPYG+ VWSTG+G V R + DEWLRV V+A+GDC+
Sbjct: 320 VPYGMAVWSTGIGTRPFVVEFMKQIGQANRRVLATDEWLRVRECDGVYAIGDCA 373
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL N++ A + G PF YRHLG A +G
Sbjct: 467 LPATAQVASQQGQYLARCFNKMKDAEENPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGE 526
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L +S+ WL W S Y T+ +SWR R V +W F+FGRD S I
Sbjct: 527 QTAAQL----PGDWISIGHSTQWL-WYSVYATKQISWRTRMLVVSDWTRRFIFGRDSSCI 581
>gi|336471803|gb|EGO59964.1| hypothetical protein NEUTE1DRAFT_121654 [Neurospora tetrasperma
FGSC 2508]
gi|350292919|gb|EGZ74114.1| FAD/NAD(P)-binding domain-containing protein [Neurospora
tetrasperma FGSC 2509]
Length = 673
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 19/249 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ EN FL++++ A++IR K++ NL LS +P S+E
Sbjct: 244 RFYVPYDKLVIAVGSTTNPHGVKGL-ENCHFLKDINDARQIRNKIIQNLELSCLPTTSDE 302
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + +++ I V LI++ + IL+++D
Sbjct: 303 ERKRLLSFVVCGGGPTGVEFAAELFDLLNEDLTLHFPRLLRNEISVHLIQSRDHILNTYD 362
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DG-----TEVPYGLLVWSTGV 186
+ + YA + S+ V LV V +V + ++ DG E+P G +WSTGV
Sbjct: 363 EAVSKYAEDRFSRDQVDVLVNSRVAEVRPESILFTQLGPDGKTTVTKELPMGFCLWSTGV 422
Query: 187 GPSTLVKSLDLPKSPGGR----IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPAL 240
+ K + P + D LR+ + DV+A+GDCS + ++ L
Sbjct: 423 SQAEFCKRISRQLGPAQTNRHALETDTHLRLNGTPLGDVYAIGDCSTIQNNVADHIITFL 482
Query: 241 AQVAERQGK 249
+A + GK
Sbjct: 483 RNLAWKHGK 491
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 18/124 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMA 287
T LPA AQ A +QG+YL N++ +A G SA ++ GD F YRHLGS+A
Sbjct: 556 TSLPATAQRAHQQGQYLAHKFNKLARAAPGL--SANEIHEGDLDAAVYKAFEYRHLGSLA 613
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG A+ D G + +G L W V WRS Y T+ VS R R +A++W +F
Sbjct: 614 YIGN-SAVFDW-----GDGWNFSGGL-WAVYAWRSIYFTQSVSLRTRVLMAMDWGKRALF 666
Query: 346 GRDI 349
GRD+
Sbjct: 667 GRDL 670
>gi|162451296|ref|YP_001613663.1| NADH dehydrogenase [Sorangium cellulosum So ce56]
gi|161161878|emb|CAN93183.1| NADH dehydrogenase [Sorangium cellulosum So ce56]
Length = 445
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 174/359 (48%), Gaps = 30/359 (8%)
Query: 4 HCETVTDELRTLEPWKFKI-------SYDKLVIALGAEASTFGIHGVKENATFLREVHHA 56
+ + E++ ++P + ++ YDKL++A GA S FG A L+ V A
Sbjct: 68 NTSVILAEVKAIDPVQKRVIFEDGELGYDKLIVAAGASHSYFGNDAWAAVAPGLKTVEDA 127
Query: 57 QEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 116
EIRR++LL ++ +S + VVVG GPTGVE +G LS+ + + +
Sbjct: 128 LEIRRRVLLAFEAAEREP-DPARRSAWMTFVVVGAGPTGVELAGALSELARHTLVREFRR 186
Query: 117 V-KDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT 173
+ + L+E A ++L S+ L A QL+ V + V D+D + + + D
Sbjct: 187 IDPSKARILLLEGAGQVLPSYVPELGEKARQQLAALNVEVRTNCRVTDIDEEGVSIGD-K 245
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG 233
+ ++W GV S L ++L +P GR+ + L VP +D++ +GD + + G
Sbjct: 246 RIEARTVLWGAGVAASALARTLGVPLDRAGRVLVAPDLTVPGHEDIYVIGDLASVKQEDG 305
Query: 234 KTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 293
T +P +A A + G++ + R + G R PF Y GS++TIGR
Sbjct: 306 -TPVPGVAPAAIQGGRHAARCIARTLR-GLPRL----------PFRYNDRGSLSTIGRAA 353
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A+ D + L L+GFL+WL W ++ ++ +RNRF V +WA ++V SR+
Sbjct: 354 AVADFGR------LKLSGFLAWLAWLFVHILFLIGFRNRFLVLFSWALSYVTYERASRL 406
>gi|116252956|ref|YP_768794.1| transmembrane NADH dehydrogenase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115257604|emb|CAK08701.1| putative transmembrane NADH dehydrogenase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 421
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 170/336 (50%), Gaps = 26/336 (7%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA + FG + A L+ + A IRR++LL +++ +
Sbjct: 96 LGYDTLVLATGATHAYFGHDEWEPVAPGLKTLEDATTIRRRVLLAFEKAEMEA-DPAVRD 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F + L
Sbjct: 155 ALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAEEL 214
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
YA L K GV + G V + ++ + + + T V +VW+ GV S + L +P
Sbjct: 215 SAYARKALEKLGVEIHLGKPVTECNADGVKIGE-TFVASRTIVWAAGVTASPAAQWLGVP 273
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR- 257
GR+ +++ L P + +VF VGD + + GK V P +A A++QG Y+ ++
Sbjct: 274 ADRAGRVVVEKDLSAPGLPEVFVVGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIRAR 332
Query: 258 -IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+GK PF Y H GS+ATIG+ A++D + K L G+L+W
Sbjct: 333 ILGKPAPA------------PFRYWHQGSLATIGKSAAIIDFGRIK------LKGWLAWW 374
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|407647619|ref|YP_006811378.1| NADH dehydrogenase [Nocardia brasiliensis ATCC 700358]
gi|407310503|gb|AFU04404.1| NADH dehydrogenase [Nocardia brasiliensis ATCC 700358]
Length = 430
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 163/339 (48%), Gaps = 49/339 (14%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+ +I Y L+ A GA S FG E L+ + A+ +R ++ + ++ G EE
Sbjct: 103 QHRIRYGSLIAATGASQSYFGRDDFAEKTFSLKTIDDAKLLRAQI--QRVFAEAAGADEE 160
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDD 137
+ RLL VVVG G TGVE +G+L +++ +RY H + + VTL+E A E+L F
Sbjct: 161 TRRRLLSFVVVGAGATGVEVAGQL-----KELAKRYYHQE--VSVTLVEGAGEVLPPFGG 213
Query: 138 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGL----LVWSTGVGPSTLV 192
L YA L++SGV ++ G V D++ K+ + D + V +G+ +VWS GV
Sbjct: 214 GLSEYAKKSLTRSGVEVLLGTFVTDIEHGKVTVKDKSGVEHGIAAETVVWSAGVQAGGFA 273
Query: 193 KSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS---GYLESTGKTVLPALAQVAE 245
K L + GR+ I+ L V D++A+GD + GY P + VA
Sbjct: 274 KILAEATGVATDRAGRLLINPDLTVGGYADIYAIGDMTSLNGY---------PGQSPVAM 324
Query: 246 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 305
++G++ ++ R A G F Y GSMA I R+ A+ L
Sbjct: 325 QEGRHAADIIRRKKPA-------------GTAFKYWDKGSMAVISRFSAVTKLTDK---- 367
Query: 306 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
++ G L+W VW + +L +V +RNRF +W F+
Sbjct: 368 -ITFRGVLAWFVWLAVHLFYLVGFRNRFAAVASWLVAFI 405
>gi|384099786|ref|ZP_10000860.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|383842707|gb|EID81967.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
Length = 434
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 40/336 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L+ A GA + FG E L+ V A +RR+++ + S+ E+
Sbjct: 99 IGYDSLIAATGARQAYFGHDEFAEVTYALKTVADADRLRRQIVR--CFEEAHTTSDPERR 156
Query: 82 R-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDDR 138
R LLH +V+G GPTGVE +G++ + R + + + + VTL+E A E L F +
Sbjct: 157 RDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGAGETLPVFGGK 216
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGVGP---- 188
L Y L ++GV +V G +V D+D L+ + + ++WS G+
Sbjct: 217 LSKYTQDSLERAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGIQANDFA 276
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ L + GGR+ +DE L V DV+A+GD + LPA + A + G
Sbjct: 277 AVLAERTGCETGRGGRLLVDEDLTVGRYDDVYAIGDMASL------NNLPAQSPFAMQGG 330
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+++ +++ G RA LG PF YR GSMA I R++A+ + + +
Sbjct: 331 RHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK------VE 371
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 372 LTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|111021475|ref|YP_704447.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|397734595|ref|ZP_10501300.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
gi|110821005|gb|ABG96289.1| probable NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|396929522|gb|EJI96726.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
Length = 434
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 164/336 (48%), Gaps = 40/336 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L+ A GA + FG E L+ V A +RR+++ + S+ E+
Sbjct: 99 IGYDSLIAATGARQAYFGHDEFAEVTYALKTVADADRLRRQIVR--CFEEAHTTSDPERR 156
Query: 82 R-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDDR 138
R LLH +V+G GPTGVE +G++ + R + + + + VTL+E A E L F +
Sbjct: 157 RDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGAGETLPVFGGK 216
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGVGP---- 188
L Y L ++GV +V G +V D+D L+ + + ++WS G+
Sbjct: 217 LSKYTQDSLERAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGIQANDFA 276
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ L + GGR+ +DE L V D++A+GD + LPA + A + G
Sbjct: 277 AVLAERTGCETGRGGRLLVDEDLTVGRYDDIYAIGDMASL------NNLPAQSPFAMQGG 330
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+++ +++ G RA LG PF YR GSMA I R++A+ + + +
Sbjct: 331 RHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK------IE 371
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 372 LTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|419968950|ref|ZP_14484738.1| NADH dehydrogenase [Rhodococcus opacus M213]
gi|414565686|gb|EKT76591.1| NADH dehydrogenase [Rhodococcus opacus M213]
Length = 434
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 40/336 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD L+ A GA + FG E L+ V A +RR+++ + S+ E+
Sbjct: 99 IGYDSLIAATGARQAYFGHDEFAEVTYALKTVADADRLRRQIVR--CFEEAHTTSDPERR 156
Query: 82 R-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDDR 138
R LLH +V+G GPTGVE +G++ + R + + + + VTL+E A E L F +
Sbjct: 157 RDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGAGETLPVFGGK 216
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGVGP---- 188
L Y L ++GV +V G +V D+D L+ + + ++WS G+
Sbjct: 217 LSKYTQDSLERAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGIQANDFA 276
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ L + GGR+ +DE L V DV+A+GD + LPA + A + G
Sbjct: 277 AVLAERTGCETGRGGRLLVDEDLTVGRYDDVYAIGDMASL------NNLPAQSPFAMQGG 330
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+++ +++ G RA LG PF YR GSMA I R++A+ + + +
Sbjct: 331 RHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK------VE 371
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 372 LTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|4753821|emb|CAB41986.1| 64 kDa mitochondrial NADH dehydrogenase [Neurospora crassa]
Length = 673
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 138/249 (55%), Gaps = 19/249 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ EN FL++++ A++IR K++ NL LS +P S+E
Sbjct: 244 RFYVPYDKLVIAVGSTTNPHGVKGL-ENCHFLKDINDARQIRNKIIQNLELSCLPTTSDE 302
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + +++ I V LI++ + IL+++D
Sbjct: 303 ERKRLLSFVVCGGGPTGVEFAAELFDLLNEDLTLHFPRLLRNEISVHLIQSRDHILNTYD 362
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DG-----TEVPYGLLVWSTGV 186
+ + YA + S+ V LV V +V + ++ DG E P G +WSTGV
Sbjct: 363 EAVSKYAEDRFSRDQVDVLVNSRVAEVRPESILFTQRGPDGKTTVTKECPMGFCLWSTGV 422
Query: 187 GPSTLVKSLDLPKSPGGR----IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPAL 240
+ K + P + D LR+ + DV+A+GDCS + ++ L
Sbjct: 423 SQAEFCKRISRQLGPAQTNRHALETDTHLRLNGTPLGDVYAIGDCSTIQNNVADHIITFL 482
Query: 241 AQVAERQGK 249
+A + GK
Sbjct: 483 RNLAWKHGK 491
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 18/126 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMA 287
T LPA AQ A +QG+YL N++ +A G SA ++ GD F YRHLGS+A
Sbjct: 556 TSLPATAQRAHQQGQYLAHKFNKLARAAPGL--SANEIHEGDLDAAVYKAFEYRHLGSLA 613
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG A+ D G + +G L W V WRS Y T+ VS R R +A++W +F
Sbjct: 614 YIGN-SAVFDW-----GDGWNFSGGL-WAVYAWRSIYFTQCVSLRTRVLMAIDWGKRALF 666
Query: 346 GRDISR 351
GRD+ R
Sbjct: 667 GRDLMR 672
>gi|325106638|ref|YP_004267706.1| NADH dehydrogenase (ubiquinone) [Planctomyces brasiliensis DSM
5305]
gi|324966906|gb|ADY57684.1| NADH dehydrogenase (ubiquinone) [Planctomyces brasiliensis DSM
5305]
Length = 442
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 173/358 (48%), Gaps = 33/358 (9%)
Query: 4 HCETVTDELRTLEPWKFKI-------SYDKLVIALGAEASTFGIHGVKENATFLREVHHA 56
+C + E+ +P + KI YD LV+A GA+ S FG + A L+ + A
Sbjct: 71 NCMVLLGEVTGFDPAQRKIHLADGQVPYDTLVVAAGAKHSYFGNDQWEPFAPGLKTIEQA 130
Query: 57 QEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 116
+IRR++L ++ S + +S L V+VGGGPTGVE SG LS+ ++ +
Sbjct: 131 TDIRRRVLYAFEAAESEEYS-DRRSAWLTFVIVGGGPTGVELSGALSEISHHMMKHDFRR 189
Query: 117 VK-DYIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT 173
+K + + L+E + +LS + + L A L K V + G +V + ++ + G
Sbjct: 190 IKPEDTRIILVEGGQHVLSMYPESLCERARRDLEKLSVEVRTGCMVTSITPTQVTMKCGD 249
Query: 174 E---VPYGLLVWSTGVGPSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+ + ++W GV STL + L + GR+ + L + ++F +GD +
Sbjct: 250 QEETIDTRTVIWGAGVAASTLGRKLAEATEAETDRVGRVVVQPDLSLTGYPEIFVIGDLA 309
Query: 227 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM 286
+ G+ LP LA VA +QG+Y+ L++R + K E +PF YR GSM
Sbjct: 310 HCKDEEGRP-LPGLAPVAMQQGEYVAKLVSRRIR--------KKQTETPEPFRYRDRGSM 360
Query: 287 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
A IGRY A+ + K L+G +W +W +L + +RNR V + W T++
Sbjct: 361 AVIGRYSAIAKVGNWK------LSGLTAWFLWLFLHLMEITQFRNRLLVLMQWGWTYM 412
>gi|390167435|ref|ZP_10219425.1| NADH dehydrogenase FAD-containing subunit [Sphingobium indicum
B90A]
gi|390168565|ref|ZP_10220523.1| NADH dehydrogenase FAD-containing subunit [Sphingobium indicum
B90A]
gi|389588807|gb|EIM66844.1| NADH dehydrogenase FAD-containing subunit [Sphingobium indicum
B90A]
gi|389589985|gb|EIM67991.1| NADH dehydrogenase FAD-containing subunit [Sphingobium indicum
B90A]
Length = 442
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 173/347 (49%), Gaps = 30/347 (8%)
Query: 4 HCETVTDELRTLEPWKFKIS--------YDKLVIALGAEASTFGIHGVKENATFLREVHH 55
+ E V E ++P ++S +D+LVIA G+ + F + A LR +
Sbjct: 73 NIEVVLGEAVGVDPQSRRLSLADGSSLHFDRLVIATGSRYNYFAHPEWEPLAPGLRSIED 132
Query: 56 AQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS 115
A+ +R ++L + L++ ++ L+ V+VG GPTGVE +G +++ + + +
Sbjct: 133 ARLLRSRILRSFELAERQP-DPHRRAELMTIVIVGAGPTGVEMAGAIAELAHYTLARDFR 191
Query: 116 HVKD-YIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDG 172
H+ + + L+EA +IL+SF DRL YA +L GV ++ G ++D+D L++ G
Sbjct: 192 HIDPGAVRILLVEAGKQILASFPDRLSTYARRRLEAMGVEIMLGKSLEDIDGDTLVIG-G 250
Query: 173 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 232
+ G ++W+ G+ S L GR+ + VPS + +GD + +
Sbjct: 251 QRLRAGTIIWAAGIKASPAAFWLQAECDRSGRVRVAADFSVPSHPHIHVLGDSAAMNDEA 310
Query: 233 GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 292
G+ LPALAQVA++QG+YL L+R GRA PF +R G+ A IGR
Sbjct: 311 GQP-LPALAQVAQQQGRYLGQSLSR---EFTGRAPLP-------PFRFRDRGNTAIIGRN 359
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
A+ D + + L G L+WL+W ++ +V + R V++ W
Sbjct: 360 AAIFDFGKRR------LKGRLAWLLWAIVHVYLLVGFEKRLLVSIQW 400
>gi|32490847|ref|NP_871101.1| hypothetical protein WGLp098 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166053|dbj|BAC24244.1| ndh [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 435
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 167/315 (53%), Gaps = 23/315 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
K +I+YD LVI++G++++ F I GVKEN F+ ++ A++ +K+ NL L E
Sbjct: 112 KREINYDILVISVGSKSNYFNIPGVKENCNFIDNIYQAKKFHKKMF-NLFLKISIKPDEN 170
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFD 136
+KS + +VGGG TGVE S EL + I + + + K+ I +TLIE E ILSS
Sbjct: 171 KKSNI---SIVGGGATGVELSAELINSIEELYKYGFQGLNKNLIEITLIEMGERILSSLP 227
Query: 137 DRLRHYATTQLSKSGVRLVR--GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
R+ + ++L K G++++ I+K D+ L N+G+ + ++VW+ G+ S
Sbjct: 228 KRISNIVDSELKKIGIKIITNTAIIK-CDANGLFTNNGSYIESDIMVWAAGIKSQKFNSS 286
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-S 253
+DL + + + + L+ + +FA+GDCS +L TG+ V P AQ A + + ++ +
Sbjct: 287 IDLETNNINQFIVKKTLQTTLDEKIFAIGDCSCFLLKTGEYV-PPRAQAAHQMARCVYLN 345
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
+L I K+ +L D +VY+ GS+ ++ ++K + N + + G +
Sbjct: 346 ILFLI-----------KNKKLND-YVYKDYGSLISLSKFKTVGSFMGNMTKNSIFIEGII 393
Query: 314 SWLVWRSAYLTRVVS 328
+ L + Y +S
Sbjct: 394 AKLAYVMLYRMHQIS 408
>gi|383780865|ref|YP_005465431.1| putative pyridine nucleotide-disulfide oxidoreductase [Actinoplanes
missouriensis 431]
gi|381374097|dbj|BAL90915.1| putative pyridine nucleotide-disulfide oxidoreductase [Actinoplanes
missouriensis 431]
Length = 447
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 167/335 (49%), Gaps = 28/335 (8%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
+ + YD L++A GA S FG E A ++ + A E+R ++ ++D+ +
Sbjct: 96 YTVEYDTLIVAAGASQSYFGNDEFAEYAPGMKSIDDALELRARIFGAFEVADLQ-TDPAD 154
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFDD 137
K R L VVVG GPTG E +G++++ R + +Y H+ + L++A +L++F D
Sbjct: 155 KERWLTFVVVGAGPTGTEMAGQIAELAHRTLPSQYRHIDTRKSRILLVDAVGAVLNTFGD 214
Query: 138 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLVK 193
RL A QL K GV ++ V VD+ + + + +P VW+ GV TL
Sbjct: 215 RLSGRARDQLEKLGVEVMLNTKVVGVDTTGIEVETSSGRQRIPTMTKVWAAGVAAPTLAT 274
Query: 194 SL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
L GR+ +++ VP ++F +GD G+ LP +AQVA + G+
Sbjct: 275 KLADAAGAKTDRAGRVLVEKDTTVPGHPEIFVLGDMMNLAGEDGRP-LPGVAQVAIQSGR 333
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
+ ++I + GG+ + PF Y GS+ATI R+ A+ + + L L
Sbjct: 334 H---AADQIKRRLGGKPDK-------QPFKYFDKGSLATISRFSAVASIGK------LHL 377
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+GF +W+VW + +L +V ++NR ++WA +F+
Sbjct: 378 SGFPAWVVWVAVHLFYLVGFKNRVTAVLHWAVSFL 412
>gi|405355405|ref|ZP_11024631.1| NADH dehydrogenase [Chondromyces apiculatus DSM 436]
gi|397091747|gb|EJJ22549.1| NADH dehydrogenase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 449
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 173/333 (51%), Gaps = 27/333 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+A GA S FG A L+ + A +IRR++L+ L++ E +
Sbjct: 88 ELKYDYLVVATGATHSYFGNDKWAAFAPGLKSIEDAVQIRRRILVAFELAEREPDPEIRR 147
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDR 138
S LL+ V++G GPTGVE +G L++ + + ++ + LIE + +L ++ D
Sbjct: 148 S-LLNFVIIGAGPTGVELAGSLAEISRHSLPGDFRNIDPKQARIILIEGVDRVLPAYPDD 206
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVKSLD 196
L A L K GV + G V +++ + + + GTE +P ++W+ GV S + +SL
Sbjct: 207 LSSKALRTLEKLGVEVRTGARVTNINEEGVFI--GTEFIPARTVLWAAGVAASPVARSLG 264
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ GR+ + L VP +DVF VGD + ++ GK V P LA A ++GK+ +
Sbjct: 265 VELDRAGRVLVTPELTVPGHEDVFVVGDLASINDADGKPV-PGLAPAAMQEGKHAAHNIR 323
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL-VDLRQNKESKGLSLAGFLSW 315
R K ME PF Y GS A IGR A+ + R+ K+S GF +W
Sbjct: 324 --------RRLQGKPME---PFSYWDRGSYAVIGRGHAVGIAFRRFKQS------GFTAW 366
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGR 347
+ W ++T ++ +R+R V ++WA +++ FG+
Sbjct: 367 MAWLLIHITFLIGFRSRLAVLLDWAYSYLTFGK 399
>gi|189022903|ref|YP_001932644.1| NADH dehydrogenase [Brucella abortus S19]
gi|237817201|ref|ZP_04596193.1| NADH dehydrogenase [Brucella abortus str. 2308 A]
gi|297249697|ref|ZP_06933398.1| NADH dehydrogenase [Brucella abortus bv. 5 str. B3196]
gi|376271297|ref|YP_005114342.1| NADH dehydrogenase [Brucella abortus A13334]
gi|189021477|gb|ACD74198.1| NADH dehydrogenase [Brucella abortus S19]
gi|237788014|gb|EEP62230.1| NADH dehydrogenase [Brucella abortus str. 2308 A]
gi|297173566|gb|EFH32930.1| NADH dehydrogenase [Brucella abortus bv. 5 str. B3196]
gi|363402469|gb|AEW19438.1| NADH dehydrogenase [Brucella abortus A13334]
Length = 441
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 115 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 174
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 175 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 232
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGD-TAWVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
>gi|418736047|ref|ZP_13292450.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421096509|ref|ZP_15557212.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200801926]
gi|410360660|gb|EKP11710.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200801926]
gi|410748054|gb|EKR00955.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|456886608|gb|EMF97748.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200701203]
Length = 422
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 173/333 (51%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALRIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L++FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLTTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D++ + + L + + ++W+ GV +T+ +L +
Sbjct: 219 EFTKKRLESRGVEVLTGTRVIDINERGVQLEEKM-ITTQTVIWAAGVQANTIASTLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRGGRVIVDEFCNIEGHPEVFVIGDIAHYSKGLERP-LPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + F Y GSMATIGR A+ + L + G W W
Sbjct: 334 ---GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQMGV------LRMRGLFGWFAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|336173817|ref|YP_004580955.1| NADH dehydrogenase (ubiquinone) [Lacinutrix sp. 5H-3-7-4]
gi|334728389|gb|AEH02527.1| NADH dehydrogenase (ubiquinone) [Lacinutrix sp. 5H-3-7-4]
Length = 427
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 170/337 (50%), Gaps = 33/337 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN----LMLSDVPGISE 77
+ +D LV+A G++ + FG +KEN+ ++ V A +R +L N L+ SD+
Sbjct: 100 LKFDYLVVASGSKTNYFGNKSIKENSMEMKTVPQALNLRSLILENFEDALLTSDL----- 154
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSF 135
E++ L++ V+VG GPTGVE +G L++ + + Y + + + LI++ ++IL +
Sbjct: 155 NERNALMNFVIVGAGPTGVELAGALAEIKKGILPKDYPDLDTRLAQINLIQSGDKILKTM 214
Query: 136 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
+ A L GV + + I V D + + N +VW+ GV +T +K
Sbjct: 215 SAKASKKAEDFLENLGVHVWKNIRVTGYDGKTVTTNSDLTFDAATVVWAAGVKGAT-IKG 273
Query: 195 LDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
LD + + G RI ++E+ +V +VFA+GD + T P +AQ A +QGK L
Sbjct: 274 LDAEQFVTRGNRIIVNEFNQVKGCDNVFAIGDVAQMETETVPFGHPMMAQPAIQQGKLL- 332
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
+ ++K M PFVY GSMATIGR KA+VDL + K G
Sbjct: 333 -------GENLLKLLASKPMT---PFVYNDKGSMATIGRNKAVVDLPKFK------FQGV 376
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRD 348
+W VW +L ++ +RNR V +NW ++ F R+
Sbjct: 377 FAWFVWMFVHLFFLIGFRNRMVVFINWVYNYIRFDRE 413
>gi|418720839|ref|ZP_13280033.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. UI 09149]
gi|410742743|gb|EKQ91490.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. UI 09149]
Length = 422
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 173/333 (51%), Gaps = 23/333 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L+++ GA++S FG ++ L+ + A IR KLL++ +++ G E K+
Sbjct: 100 NYDYLILSAGAKSSYFGNDHWEKYTIGLKNLKDALRIRHKLLISFEKAELSGDPEVVKA- 158
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRLR 140
LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA +L++FD L
Sbjct: 159 LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAPRLLTTFDPSLG 218
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
+ +L GV ++ G V D++ + + L + + ++W+ GV +T+ +L +
Sbjct: 219 EFTKKRLESRGVEVLTGTRVIDINERGVQLEEKM-ITTQTVIWAAGVQANTIASTLGVTL 277
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG+Y+ +L+
Sbjct: 278 DRGGRVIVDEFCNIEGHPEVFVIGDIANYSKGL-EHPLPGVSPVAMQQGRYVAALIQ--- 333
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
G N + F Y GSMATIGR A+ + L + G W W
Sbjct: 334 ---GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQMGV------LRMRGLFGWFAWL 379
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+L V ++N+ + + W +++ R +R+
Sbjct: 380 FVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|62317654|ref|YP_223507.1| pyridine nucleotide-disulfide oxidoreductase [Brucella abortus bv.
1 str. 9-941]
gi|83269637|ref|YP_418928.1| flavin-containing monooxygenase FMO [Brucella melitensis biovar
Abortus 2308]
gi|260544885|ref|ZP_05820706.1| NADH dehydrogenase [Brucella abortus NCTC 8038]
gi|260756750|ref|ZP_05869098.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 6 str. 870]
gi|260760180|ref|ZP_05872528.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 4 str. 292]
gi|260763418|ref|ZP_05875750.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 2 str. 86/8/59]
gi|260882565|ref|ZP_05894179.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 9 str. C68]
gi|423168450|ref|ZP_17155152.1| hypothetical protein M17_02139 [Brucella abortus bv. 1 str. NI435a]
gi|423172115|ref|ZP_17158789.1| hypothetical protein M19_02647 [Brucella abortus bv. 1 str. NI474]
gi|423174154|ref|ZP_17160824.1| hypothetical protein M1A_01551 [Brucella abortus bv. 1 str. NI486]
gi|423176030|ref|ZP_17162696.1| hypothetical protein M1E_00292 [Brucella abortus bv. 1 str. NI488]
gi|423181544|ref|ZP_17168184.1| hypothetical protein M1G_02643 [Brucella abortus bv. 1 str. NI010]
gi|423184677|ref|ZP_17171313.1| hypothetical protein M1I_02645 [Brucella abortus bv. 1 str. NI016]
gi|423187829|ref|ZP_17174442.1| hypothetical protein M1K_02646 [Brucella abortus bv. 1 str. NI021]
gi|423190248|ref|ZP_17176857.1| hypothetical protein M1M_01929 [Brucella abortus bv. 1 str. NI259]
gi|62197847|gb|AAX76146.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Brucella abortus bv. 1 str. 9-941]
gi|82939911|emb|CAJ12924.1| Flavin-containing monooxygenase FMO:Pyridine nucleotide-disulphide
oxidoreductase, class I:FAD-dependent pyridine
nucleotide- [Brucella melitensis biovar Abortus 2308]
gi|260098156|gb|EEW82030.1| NADH dehydrogenase [Brucella abortus NCTC 8038]
gi|260670498|gb|EEX57438.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 4 str. 292]
gi|260673839|gb|EEX60660.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 2 str. 86/8/59]
gi|260676858|gb|EEX63679.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 6 str. 870]
gi|260872093|gb|EEX79162.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 9 str. C68]
gi|374536537|gb|EHR08057.1| hypothetical protein M19_02647 [Brucella abortus bv. 1 str. NI474]
gi|374538943|gb|EHR10450.1| hypothetical protein M17_02139 [Brucella abortus bv. 1 str. NI435a]
gi|374540155|gb|EHR11657.1| hypothetical protein M1A_01551 [Brucella abortus bv. 1 str. NI486]
gi|374546134|gb|EHR17594.1| hypothetical protein M1G_02643 [Brucella abortus bv. 1 str. NI010]
gi|374546977|gb|EHR18436.1| hypothetical protein M1I_02645 [Brucella abortus bv. 1 str. NI016]
gi|374554009|gb|EHR25422.1| hypothetical protein M1K_02646 [Brucella abortus bv. 1 str. NI021]
gi|374555688|gb|EHR27095.1| hypothetical protein M1E_00292 [Brucella abortus bv. 1 str. NI488]
gi|374556288|gb|EHR27693.1| hypothetical protein M1M_01929 [Brucella abortus bv. 1 str. NI259]
Length = 424
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGD-TAWVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|261217103|ref|ZP_05931384.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M13/05/1]
gi|261319974|ref|ZP_05959171.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M644/93/1]
gi|260922192|gb|EEX88760.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M13/05/1]
gi|261292664|gb|EEX96160.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M644/93/1]
Length = 424
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|226225801|ref|YP_002759907.1| NADH dehydrogenase [Gemmatimonas aurantiaca T-27]
gi|226088992|dbj|BAH37437.1| NADH dehydrogenase [Gemmatimonas aurantiaca T-27]
Length = 476
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 159/330 (48%), Gaps = 29/330 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLML---SDVPGISE 77
+I YD L++A GA + FG A L+ + A ++R++LLL +D P + +
Sbjct: 111 EIPYDFLIVATGARHAYFGHDEWSAFAPGLKSIEDATDMRQRLLLAFERAERTDDPAVRD 170
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSF 135
L +VGGGPTGVE +G + D R +RQ + + V LIEA ILS+F
Sbjct: 171 AN----LTFAIVGGGPTGVELAGSIPDITKRALRQEFRRIDTRQTRVLLIEAGPRILSTF 226
Query: 136 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
+ L A L GV + G+ V +D+ + + + +P + W+ G S L +
Sbjct: 227 PEALSRAAQQDLEGLGVEVRLGVPVTHIDNDSVTIGE-ERIPTRTVFWAAGNVASPLGRM 285
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
LD GR+ + VP+ +VF VGD S + G+ PA+A A + G++ +
Sbjct: 286 LDADTDRAGRVKVATDCSVPAHPNVFVVGDLSIVMRENGQPA-PAVAPTANQTGQHAARM 344
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
I + GR + PF Y H G +ATIGR+KA+ + L L+G+ +
Sbjct: 345 ---IVASMNGRPRT--------PFQYWHKGDLATIGRHKAVAAFGR------LHLSGYFT 387
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
W +W +L +V +RNR V + W +V
Sbjct: 388 WFLWLFVHLMYLVGFRNRASVLLQWGWAYV 417
>gi|282859049|ref|ZP_06268185.1| pyridine nucleotide-disulphide oxidoreductase [Prevotella bivia
JCVIHMP010]
gi|424900121|ref|ZP_18323663.1| NADH dehydrogenase, FAD-containing subunit [Prevotella bivia DSM
20514]
gi|282588217|gb|EFB93386.1| pyridine nucleotide-disulphide oxidoreductase [Prevotella bivia
JCVIHMP010]
gi|388592321|gb|EIM32560.1| NADH dehydrogenase, FAD-containing subunit [Prevotella bivia DSM
20514]
Length = 435
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 172/331 (51%), Gaps = 39/331 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A GA + FG +++N ++ V A +R +L NL +++ E+K
Sbjct: 102 IQYDYLVLAAGATTNYFGNKEIEKNCLPMKTVSEAMYLRNTILHNLEKAEIE-TDPEKKQ 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIE-ANEILSSFDDR 138
L++ V+VGGGP GVE +G +++ + + Y H+ + +H+ L+ A+ +LS+ D+
Sbjct: 161 ALMNVVIVGGGPAGVEIAGAVAEMKRNVIARDYPHLAANNRMHIYLVNAADRLLSTMDEY 220
Query: 139 LRHYATTQLSKSGVRLVRGIVK-DVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
A L + V + + + ++ L + G ++P ++W +G V++ +
Sbjct: 221 SSKKALEGLKELFVHVRQPYMALSYENGVLKTDKGLDIPAETVIWVSG------VRATSM 274
Query: 198 PKSP------GGRIGIDEWLRVPSVQDVFAVGDCS---GYLESTGKTVLPALAQVAERQG 248
P P GRI D + +V V D++A+GD + G E G P LAQVA +Q
Sbjct: 275 PGLPQDCYGRAGRIKTDRFCKVKGVDDIYAIGDINIIEGDAEYPGGH--PQLAQVAIQQA 332
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
K + + N + +A G E F Y++LG+MATIGR +A+ ++ ++K
Sbjct: 333 KCVAN--NLVAEAKG---------EAPKMFKYKNLGTMATIGRNRAVAEIGKSK------ 375
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+GFL+W +W +L ++ +N+ ++ +NW
Sbjct: 376 FSGFLAWFLWLVVHLRSILGVKNKTFILLNW 406
>gi|256015261|ref|YP_003105270.1| NADH dehydrogenase [Brucella microti CCM 4915]
gi|376276813|ref|YP_005152874.1| NADH dehydrogenase [Brucella canis HSK A52141]
gi|255997921|gb|ACU49608.1| NADH dehydrogenase [Brucella microti CCM 4915]
gi|363405187|gb|AEW15481.1| NADH dehydrogenase [Brucella canis HSK A52141]
Length = 441
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 115 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 174
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 175 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 232
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
>gi|289064121|gb|ADC80458.1| putative FAD-dependent pyridine nucleotide-disulphide
oxidoreductase [Comamonas testosteroni]
Length = 439
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 163/334 (48%), Gaps = 26/334 (7%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD LV+A GA + FG + A L+ + A IR ++L ++ + ++ L
Sbjct: 103 YDTLVLATGATHAYFGHDEWEPFAPGLKTLEDATTIRGRILAAFEEAERTS-DPQRRAAL 161
Query: 84 LHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDR 138
V++GGGPTGVE +G ++ D + RD R S V LIEA + +LS F +
Sbjct: 162 QTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGQRLLSVFPED 218
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
L Y L K GV +V G S ++ G + +VW+ GV S + L
Sbjct: 219 LSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGNPLSAKTIVWAAGVQASPAARWLGAA 278
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L V ++FA+GD + GK V P +A A++QGKY+ SL+ R
Sbjct: 279 SDRAGRVVVGADLTVAGYPEIFAIGDTASCTMPDGKPV-PGIAPAAKQQGKYVASLIGR- 336
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ G ++ A F YRH G++ATIGR A++D+ + K L G +W +W
Sbjct: 337 -RLKGKPSDGA--------FKYRHQGNLATIGRSLAVIDMGRVK------LRGAFAWWIW 381
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ A++ ++ RNR VA++W G SRI
Sbjct: 382 KLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|148558547|ref|YP_001257453.1| NADH dehydrogenase [Brucella ovis ATCC 25840]
gi|161620545|ref|YP_001594431.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Brucella canis ATCC 23365]
gi|163844642|ref|YP_001622297.1| hypothetical protein BSUIS_B0479 [Brucella suis ATCC 23445]
gi|260568219|ref|ZP_05838688.1| NADH dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261323269|ref|ZP_05962466.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella neotomae 5K33]
gi|261753470|ref|ZP_05997179.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 3 str. 686]
gi|376278449|ref|YP_005108482.1| NADH dehydrogenase [Brucella suis VBI22]
gi|148369832|gb|ABQ62704.1| NADH dehydrogenase [Brucella ovis ATCC 25840]
gi|161337356|gb|ABX63660.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella canis ATCC 23365]
gi|163675365|gb|ABY39475.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|260154884|gb|EEW89965.1| NADH dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261299249|gb|EEY02746.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella neotomae 5K33]
gi|261743223|gb|EEY31149.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 3 str. 686]
gi|358259887|gb|AEU07620.1| NADH dehydrogenase [Brucella suis VBI22]
Length = 424
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|343087190|ref|YP_004776485.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Cyclobacterium marinum DSM 745]
gi|342355724|gb|AEL28254.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Cyclobacterium marinum DSM 745]
Length = 442
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 168/330 (50%), Gaps = 38/330 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LVIA G + + FG+ +++ + ++ + + IR ++ NL + + E EK
Sbjct: 110 IDYDFLVIATGTKTNFFGLTDIEKWSLGMKSIQDSLNIRHTMIQNLEQAAIT-CDEHEKD 168
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEILSSFDDRL 139
L + ++VGGGP GVE +G L++F + Y + + + + L+EA +++L+S D+
Sbjct: 169 ILTNFIIVGGGPAGVEMAGALAEFKKYILPGDYPEYSSEIMDIYLLEAGDQLLASMSDKA 228
Query: 140 RHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV--------GPST 190
A L++ GV+ ++ V+ D + N G ++ L+W+ GV G +
Sbjct: 229 SEKALKYLTRLGVQVMLEEAVEHYDGSAVSTNSGKKLYARNLIWTAGVTGDFPEGIGEES 288
Query: 191 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+V+ G R+ ++ L V ++FA+GD + + P +AQVA +QGKY
Sbjct: 289 IVR--------GNRLQVNNTLLVKGYTNIFAIGDIAAVVSQRTPKGHPQVAQVAIQQGKY 340
Query: 251 LFSLLN-RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
L ++ RI GR E PF Y GS+AT+G+ +A+ DL +
Sbjct: 341 LGEVIKYRI----AGR-------EYSKPFRYLDKGSLATVGKRRAVADLGK------FRF 383
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
G+++WL+W +L + +RN+ VA+NW
Sbjct: 384 GGYIAWLLWSVVHLFSISGFRNKLMVALNW 413
>gi|304438482|ref|ZP_07398422.1| NADH dehydrogenase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368565|gb|EFM22250.1| NADH dehydrogenase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 427
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 160/338 (47%), Gaps = 17/338 (5%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD--VPGISEE 78
+ISYD LV+A G + FG V N+ ++ + A +R ++ + E
Sbjct: 95 EISYDYLVLAAGGTTNFFGNESVARNSYGMKTLQEAIALRGHIVHEFERASKKTDPSHTE 154
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSSF 135
E+ R L+ V+VGGG TG+E +G + + I V ++ H D+ +HVTL+EA +L
Sbjct: 155 ERLRHLNFVIVGGGATGIEMAGAIMELI--GVFKKEFHNIDFSEVHVTLLEAMGSVLPMV 212
Query: 136 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
L+ + L K GV + + V D L+L DG + ++W+ GV +K
Sbjct: 213 PPDLQQHTIDVLRKKGVDVRLNTAVTAYDGNDLVLKDGEIISTKTVIWAAGVRAQDFIKD 272
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
GRI ++E L V VFA+GDC+ + T + LP +A VA ++ +
Sbjct: 273 CGGEVDRAGRIIVEENLLVKGSDCVFAIGDCANFQHGTERP-LPTVAPVATQEAMQV--- 328
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
KA S K + FVY LG+MATIGR +A+++ L +GF +
Sbjct: 329 -----KANIMALISGKMPDQLGKFVYHDLGAMATIGRGEAVMNGPMPVLGFNLKASGFFA 383
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W W +L R+ F V++ W F FG ++RI
Sbjct: 384 WFAWMLVHLIRLAGKYADFTVSIKWIWNFFFGTRLARI 421
>gi|291279463|ref|YP_003496298.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Deferribacter desulfuricans SSM1]
gi|290754165|dbj|BAI80542.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Deferribacter desulfuricans SSM1]
Length = 413
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 175/335 (52%), Gaps = 24/335 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD L+IA GAE + FG K+ A L+ + AQ +R K+L +++ S++E
Sbjct: 94 RLYYDYLIIAAGAEENYFGNTEWKKFAPTLKTLKDAQILRNKILNAFEMAE-KATSDQEM 152
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDR 138
+ L +V+GGGPTGVE +G + + + + + ++ + + LIEA + IL SFD+
Sbjct: 153 KKYLTFIVIGGGPTGVELAGAIGEMTRITLAKDFRNIDPRLSRILLIEAGKRILPSFDEN 212
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L A L GV++ +V ++ + + + ++ ++W+ G+ ++L +
Sbjct: 213 LTSKAVKDLESLGVQVWTNSLVTEITDDSIKIGN-EQIEAATVIWAAGIKANSLSSIIPS 271
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
K GR+ L + + +VF GD + ++++ LP +A VA +QGK++ +
Sbjct: 272 EKDKMGRVFTANDLSLKNFPEVFVCGDLAHFIQNGEP--LPGIAPVAMQQGKHVAKQI-- 327
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
N K+ + + FVY G +ATIG+ KA+ ++R L L+GFL+W+
Sbjct: 328 --------INDLKNKK-REEFVYFDKGQLATIGKSKAIAEIR------NLKLSGFLAWIT 372
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ + ++NR +V + WA +++ + +R+
Sbjct: 373 WIFVHILYLTGFKNRIFVTLQWAWSYITFKKGARL 407
>gi|108803940|ref|YP_643877.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rubrobacter xylanophilus DSM 9941]
gi|108765183|gb|ABG04065.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rubrobacter xylanophilus DSM 9941]
Length = 430
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 172/346 (49%), Gaps = 33/346 (9%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
+ E V E + +I YD LV+ALG E + FGI GV+E+ LR + A++IR
Sbjct: 95 RAQLEGVDPERGVVRADGVEIPYDHLVLALGGEPAYFGIPGVEEHCISLRGIADAEKIRN 154
Query: 62 KLL-----LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 116
+++ L +VP SRL VV+GGG TGVE L + + + + Y +
Sbjct: 155 RVIERYEEATLARGEVP------DSRL-SFVVIGGGATGVETVAALHELVHGALAEDYPN 207
Query: 117 VKDY-IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT 173
+ + +TL++ N EIL D LR A +L + +R++ G ++V +++L DG
Sbjct: 208 LHPRRVRLTLVDRNPEILKELDPALRRVARRRLERLNIRILNGATAREVLKDRVVLEDGR 267
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG 233
E+P ++W+ G S ++ L P + +D +RV +V+ VGDC+ +++ G
Sbjct: 268 EIPSENVIWTAGARASRKLEELPFPHHDRRGLEVDAGMRVRGFANVWGVGDCAANVDAEG 327
Query: 234 KTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 293
V P AQ A ++G+ + N + GGR +PF YR LG + +G
Sbjct: 328 NPV-PPNAQAAVQEGRAVAR--NVLAAIDGGRP---------EPFRYRPLGQLVELGSRF 375
Query: 294 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
A+ E G+ +G L+ L WR YL ++ S +NR VA +W
Sbjct: 376 AV------NEVLGVRFSGLLASLFWRLTYLYKLESPQNRARVAADW 415
>gi|261750197|ref|ZP_05993906.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 5 str. 513]
gi|261739950|gb|EEY27876.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 5 str. 513]
Length = 424
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGAIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|145342040|ref|XP_001416104.1| NADH dehydrogenase, extrinsic [Ostreococcus lucimarinus CCE9901]
gi|144576328|gb|ABO94396.1| NADH dehydrogenase, extrinsic [Ostreococcus lucimarinus CCE9901]
Length = 589
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 134/230 (58%), Gaps = 13/230 (5%)
Query: 10 DELRTLEPWK-FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 68
++L + WK F + YD LV A+GA +TFG+ GV+EN F +E++ A RR++
Sbjct: 165 EDLAKSQAWKEFDLEYDYLVTAVGAVPNTFGVPGVQENCMFFKEINDAARFRREVNERFE 224
Query: 69 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS-HVKDYIHVTLIE 127
+ +PG+ +E +LL VV+G GPTGVE + EL D++ +DV + + + + + + +I+
Sbjct: 225 CATLPGVPKERIQQLLRFVVIGAGPTGVELAAELYDYVYQDVAKTFPRRLLEDVSIEIID 284
Query: 128 ANE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLL 180
E ILS++D R+ YAT ++ ++ + G VK+V ++++D EVP+GL
Sbjct: 285 LQEKILSAYDRRIAEYATDFFQRANIKCLLGAAVKEVKDGAVVISDRDGSNVREVPFGLA 344
Query: 181 VWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVP-SVQDVFAVGDCS 226
VW TG+ + + L LP+ R + D+ LRV S +FA+GDC+
Sbjct: 345 VWCTGIKLNPFCEKLIESLPQQENKRSLLTDKNLRVKGSDGTIFALGDCA 394
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 233 GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP-FVYRHLGSMATIGR 291
G LPA AQVA+++G+YL N A ++ GD F Y H GS+A IG+
Sbjct: 480 GLRALPATAQVAKQEGQYLAQYFNTC-------AGDEDKIKQGDARFDYVHKGSLAYIGK 532
Query: 292 YKALVDLRQNKESKGLSLA-GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
A+ D+ G ++ GF + L+W+S VS RN VA + T +FGRDIS
Sbjct: 533 DAAVADI------PGFAIVKGFAAGLIWKSFETVSQVSPRNVLLVAADMIRTKIFGRDIS 586
Query: 351 RI 352
RI
Sbjct: 587 RI 588
>gi|392374757|ref|YP_003206590.1| NADH dehydrogenase FAD-containing subunit transmembrane protein
[Candidatus Methylomirabilis oxyfera]
gi|258592450|emb|CBE68759.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Candidatus Methylomirabilis oxyfera]
Length = 442
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 157/330 (47%), Gaps = 20/330 (6%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
YD L+++LG S FG ++ +A L V A IR ++ L V + +
Sbjct: 102 PYDYLIVSLGGVPSFFGNPQIEAHALTLNSVDDALGIRNHVI-RLFEQAVVEPDPIRRRQ 160
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRH 141
LL VV G GP GVE + EL I + + Y I + L+ E IL F +L
Sbjct: 161 LLTFVVAGAGPCGVELAAELHHLIRTALLKFYPVDPSEIRIVLVSKGERILPDFAGKLAD 220
Query: 142 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 200
L K G+ + V ++ + LND +P +W+ GV P+ ++ L KS
Sbjct: 221 TGQQALIKRGIDVKSNTRVTGASAEYVELNDREIIPTRTTIWAAGVTPNPVLALLPATKS 280
Query: 201 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260
P G I +DE+L++P +V+ +GD + ++ PALA VA RQG +
Sbjct: 281 PQGGIVVDEFLKIPEFPEVYVIGDGASVMDRRQGRPYPALAPVAIRQGI----------R 330
Query: 261 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 320
A G N+ + +PF + G++ +G ALV+L G+ G L W ++R
Sbjct: 331 AAGNIMNTLQG-RAREPFRFDFTGNIVGLGCGMALVNL------LGIKFHGRLGWWLYRM 383
Query: 321 AYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350
A+L R+VS+RN+ +A+ A +F RDIS
Sbjct: 384 AHLQRLVSFRNKASLALTLALNTIFDRDIS 413
>gi|311745191|ref|ZP_07718976.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Algoriphagus sp. PR1]
gi|126577713|gb|EAZ81933.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Algoriphagus sp. PR1]
Length = 443
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 168/326 (51%), Gaps = 21/326 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A+GA+ + FG ++ + ++ V A +R K++ N + + E KS
Sbjct: 109 IDYDFLVLAMGADTNYFGNKSIEYYSVPMKTVSEALFVRNKIISNYERAINIELQENRKS 168
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDRL 139
L++ V+VGGGPTGVE +G +++ + + Y + D + V LIEA ++L +
Sbjct: 169 -LMNVVIVGGGPTGVELAGAMAELRNNVLPKDYPELNFDNMKVVLIEAGPKLLGAMSKES 227
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+ ++ L + GV ++ V+D D +++ + + L+W+ G+ P+ +
Sbjct: 228 QDHSLQYLEELGVEVMLDTKVQDYDGEEVHIEGKESISTQTLLWAAGIKPNYIEGLSKEH 287
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+P GRI ++E+ V ++ ++ +GD + E P +AQVA +Q + L
Sbjct: 288 YAPNGRIFVNEFNEVSGLEGIYVLGDVALQTEENFPKGHPQVAQVALQQAENL------- 340
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
G N +K E+ F Y+ LGSMAT+GR +A+VDL + G ++WL W
Sbjct: 341 ---GKNLINISKGQEM-KAFHYKDLGSMATVGRKRAVVDL------PFMKFQGMMAWLTW 390
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFV 344
+L ++ +N+ ++ ++WA ++
Sbjct: 391 LFVHLMAILGVKNKLFIFIDWAWNYL 416
>gi|408398705|gb|EKJ77833.1| hypothetical protein FPSE_01926 [Fusarium pseudograminearum CS3096]
Length = 693
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 145/248 (58%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL++++ A++IR +++ N L+++P S+E
Sbjct: 265 RFYVPYDKLVIAVGSTTNPHGVKGL-ENAFFLKDINDARKIRNQVIQNFELANLPTCSDE 323
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL V GGGPTGVEF+ EL D + D+ + + +++ I V LI++ + IL+++D
Sbjct: 324 ERKRLLSFCVSGGGPTGVEFAAELFDLLNEDLTRHFPRLLRNEISVHLIQSRSHILNTYD 383
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILND-----GT---EVPYGLLVWSTGVG 187
+ + YA + ++ V + VK+V K+I GT E+P G +WSTGV
Sbjct: 384 ETVSRYAEDRFARDQVDVQTNSRVKEVLPDKIIFTQKQEGGGTITKELPIGFCLWSTGVS 443
Query: 188 PSTLVKSL--DLPKSPGGR--IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ ++L L KS R + D LR+ + DV+A+GDCS + V+ L
Sbjct: 444 QTQFCQTLAAKLRKSQTNRHALETDTHLRLNGSPMGDVYAIGDCSTVQNNVADHVVTFLR 503
Query: 242 QVAERQGK 249
+A ++GK
Sbjct: 504 SLAWKRGK 511
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 18/124 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMA 287
T LPA AQ A +QG+YL NR+ + G A D+ GD F Y+HLGS+A
Sbjct: 576 TSLPATAQRAHQQGQYLARKFNRMTRLHEGL--DANDIRDGDVDAAVYKAFEYKHLGSLA 633
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+G A+ D +G S+AG L W V WRS Y + VS R R +A++W +F
Sbjct: 634 YVGN-SAIFDW-----GEGRSIAGGL-WAVYAWRSVYFAQSVSLRTRLLMAMDWTKRGLF 686
Query: 346 GRDI 349
GRD+
Sbjct: 687 GRDL 690
>gi|298293540|ref|YP_003695479.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Starkeya novella DSM 506]
gi|296930051|gb|ADH90860.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Starkeya novella DSM 506]
Length = 436
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 159/335 (47%), Gaps = 22/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
I YD LV+A GA S FG A L+++ A +RR++L+ ++ E +
Sbjct: 100 PIPYDFLVLATGATHSYFGHEEWAPFAPGLKDIQDATHLRRRILVAFERAEA-SDDEAAR 158
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDR 138
RLL V++GGGPTGVE +G +++ + + V + LIEA +L +
Sbjct: 159 RRLLTFVIIGGGPTGVEMAGSIAEIARHALAPDFKRVDPRTARILLIEAGPRLLPVLTEP 218
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA +L GV ++ G V D+ + + L G +P +W+ GV S + L +
Sbjct: 219 LSAYARRRLEAMGVEVLTGRPVVDIGADHVELAGGEIIPASTKIWAAGVRASPAAQWLGV 278
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GR + L VP ++F +GD + + GK V P +A A++ G ++ +
Sbjct: 279 ETDRAGRCLVGPDLSVPDAPEIFVIGDTAAVSDPAGKPV-PGIAPAAKQMGDHVAKAIE- 336
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ G A + F YRH G +ATIGR A+V L + L L GFL W+
Sbjct: 337 -ARLAGSTAPA---------FRYRHDGDLATIGRNSAVVKLGR------LELTGFLGWMF 380
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W ++ ++ RNR VA+ W +V + +R+
Sbjct: 381 WGFIHVYFLIGTRNRIAVALAWLWNYVTHQRAARL 415
>gi|281202134|gb|EFA76339.1| calcium-binding EF-hand domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1098
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 128/219 (58%), Gaps = 13/219 (5%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YDKLVIA+G+ +T G GV EN FL+E A++IR K++ ++ PGISE E+
Sbjct: 688 EIPYDKLVIAVGSMPNTMGTKGVTENCLFLKEAGDARKIRTKIMDCFERANYPGISEIEQ 747
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEANE-ILSSFDDR 138
LH ++VG GPTGVE +GE+ D+I D+ + + + ++LI++ E +L+++D +
Sbjct: 748 RNALHFLIVGAGPTGVEAAGEIYDYIYDDLAKIFPKEIIAKCQISLIQSAEHLLNTYDKK 807
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLIL-----NDGTEVPYGLLVWSTGVGPSTLV 192
+ Y + +S + L V +V +K+++ E+P+G+ +W TGVGP L
Sbjct: 808 IIDYTEKEFQRSNINALFSSRVTEVQPRKIVVVSKIDKRSYEIPFGMALWCTGVGPRPLT 867
Query: 193 KSL--DLPKSPGGR-IGIDEWLRVPSV--QDVFAVGDCS 226
+ +P+ R I D +LR V ++V+A+GDCS
Sbjct: 868 QKFCDSIPEQSNNRAISTDVYLRAIGVPKKNVYAIGDCS 906
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKA 294
T LPA AQVA + G YL +N + K + D ++ PF Y+HLGS A IG + A
Sbjct: 990 TTLPATAQVANQMGIYLAKTMNNMTK---DPSQDYLDQKI-QPFRYKHLGSFAYIGHHNA 1045
Query: 295 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ D+ S GF W WR+ YL + S +N+F V+++W+ T +FGRDISR+
Sbjct: 1046 VADI-----PGKFSGGGFGVWWAWRAIYLEKQFSLKNKFLVSLDWSKTILFGRDISRL 1098
>gi|255553899|ref|XP_002517990.1| NADH dehydrogenase, putative [Ricinus communis]
gi|223542972|gb|EEF44508.1| NADH dehydrogenase, putative [Ricinus communis]
Length = 536
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 131/215 (60%), Gaps = 9/215 (4%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD LVIA+GA+ +TF GVKEN FL+ + AQ IRR ++ + +PG++EEE
Sbjct: 116 FSVEYDYLVIAVGAQVNTFNTPGVKENCHFLKNLEDAQRIRRSVIDCFEKAVLPGLTEEE 175
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDR 138
+ LH VVVGGGPTGVEF+ EL DF+ D+ Y VKD + +T+I++ + IL+ FD+R
Sbjct: 176 RRTNLHFVVVGGGPTGVEFAAELHDFLQEDLVHIYPTVKDLVKITVIQSGDHILNMFDER 235
Query: 139 LRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDG--TEVPYGLLVWSTGVGPSTLV 192
+ +A + + G+ + G V D + + + G VP+GL+VWSTGV +V
Sbjct: 236 ISSFAEQKFQRDGIEVRTGCRVISVSDKEITMKVKSKGEVCSVPHGLIVWSTGVSTLPVV 295
Query: 193 KSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDC 225
+ + ++ + +EWL+V ++V+A+GDC
Sbjct: 296 RDFMEQIGQAKRRVLATNEWLKVKGCENVYALGDC 330
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGR 291
LPA AQVA +QG YL NR+ + G R S+ + PF Y+H G A +G
Sbjct: 422 LPATAQVASQQGTYLSKCFNRMEECKNNPEGPPRFRSSGRHQF-RPFEYKHFGQFAPLGG 480
Query: 292 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+A +L + S G S WL W S Y ++ VSWR R V +W F+FGRD SR
Sbjct: 481 EQAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRMLVVSDWTRRFIFGRDSSR 535
Query: 352 I 352
I
Sbjct: 536 I 536
>gi|345570666|gb|EGX53487.1| hypothetical protein AOL_s00006g353 [Arthrobotrys oligospora ATCC
24927]
Length = 703
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 144/250 (57%), Gaps = 17/250 (6%)
Query: 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGI 75
E F + YDKL+I +G++ +T G+ G+ E+ FL+ + A++IR+K + N + +P
Sbjct: 274 EKRHFYLPYDKLIIGVGSKTNTHGVEGL-EHCQFLKTIDDARKIRKKAIGNFEKAVLPTT 332
Query: 76 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILS 133
S+EE+ RLL V+ GGGPTG+EF+ E+ D + D+ + Y + ++ + V +I++ + IL+
Sbjct: 333 SDEERKRLLSFVICGGGPTGIEFAAEIYDMLNEDLIRHYPRILRNEVSVHVIQSRSHILN 392
Query: 134 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT--------EVPYGLLVWST 184
++D+ L YA + ++ V + V++V K++ ++ T E+PYGL +WST
Sbjct: 393 TYDEALSMYAEERFARDHVEVYTNARVQEVKQDKIVFSEKTQDGKVVTKEIPYGLCLWST 452
Query: 185 GVGPSTLVKSL--DLPKSPGGR-IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPA 239
GV + K+L L K + D LR+ + DV+A+GDCS + + ++
Sbjct: 453 GVSQTDFAKNLATKLDKQTNKHALETDTHLRLIGAPIGDVYAIGDCSTVQYNLAQNIITF 512
Query: 240 LAQVAERQGK 249
L ++A +GK
Sbjct: 513 LREIAWEKGK 522
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 13/121 (10%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGK-AGGGRANSAKDMELGD----PFVYRHLGSMATI 289
T LPA AQ A +QG+YL LN++ + A G RAN D +L + F Y+HLGS+A +
Sbjct: 587 TSLPATAQRAHQQGQYLARKLNKLAQVAPGMRANELLDGDLDETYYKAFEYKHLGSLAYV 646
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWL-VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
G A+ D+ +G + AG ++ + +WRSAY + VS R RF + ++WA +FGRD
Sbjct: 647 GN-AAVFDV------QGFNFAGGIAAVYLWRSAYFAQSVSLRTRFLLFMDWAKRALFGRD 699
Query: 349 I 349
+
Sbjct: 700 M 700
>gi|383828659|ref|ZP_09983748.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
xinjiangensis XJ-54]
gi|383461312|gb|EID53402.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
xinjiangensis XJ-54]
Length = 431
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 166/345 (48%), Gaps = 31/345 (8%)
Query: 14 TLEPWK---FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLS 70
T++P + YD+LV+ALGA + I G+ +N + A +R +L L ++
Sbjct: 89 TVQPMAGPALSLPYDELVLALGATSKLLPIPGLADNGIGFNSLAEAAHLRDHVLRQLEIA 148
Query: 71 DVPGISEEEKSRL-LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA 128
++EE R L V VGGG TGVE EL D + DV + Y V + + L+EA
Sbjct: 149 --AATTDEELRRCALTFVFVGGGYTGVEAIAELQDMAI-DVLEGYPEVDRSEMRWILVEA 205
Query: 129 -NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGV 186
+ IL + D L ATT+L+ G+ + G +++ +++ L L+DGT++ LVW G
Sbjct: 206 MDRILGTVDADLAELATTELTARGIDIRTGTLLESAENRVLRLSDGTKLSSDTLVWVAGT 265
Query: 187 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
P T+V L LP GR+ +D+ +RV ++++ GDC+ + P AQ A R
Sbjct: 266 RPQTIVGELGLPVDERGRLVVDDTMRVNGHANIWSAGDCAAVPDPEKGGTCPPTAQHAVR 325
Query: 247 QGKYLFS--LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 304
Q + L LL G+A PF Y G T+G+ KA+ +
Sbjct: 326 QAQQLGENLLLTLRGQA-------------VKPFRYNSRGEFVTLGKNKAV------GQV 366
Query: 305 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
G + G L+W + R+ Y T++ +W V +W FG D+
Sbjct: 367 LGHKVNGSLAWTLRRAYYATQIPTWNRTVRVLGDWVVGMPFGHDV 411
>gi|226359938|ref|YP_002777716.1| NADH dehydrogenase [Rhodococcus opacus B4]
gi|226238423|dbj|BAH48771.1| NADH dehydrogenase [Rhodococcus opacus B4]
Length = 478
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 33/333 (9%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE-EKSR 82
YD L+++ GA+ S FG E+A L+ + A E R ++L +++ I + E++R
Sbjct: 109 YDSLIVSAGAQQSYFGNDHFAEHAPGLKTIDDALEARGRILHAFEKAEL--IDDPVERAR 166
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH--VTLIEANEILSSFDDRLR 140
L VVVG GPTGVE +G++++ R + + + V L A ++L F +L
Sbjct: 167 QLTFVVVGAGPTGVELAGQIAELAHRTLDGTFRSISPTAARVVLLDAAPQVLPPFGAKLG 226
Query: 141 HYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKSL 195
AT L GV + G IV DVD L + D + VWS GV S L K L
Sbjct: 227 TAATRTLQSKGVEVELGAIVTDVDEHGLTVKDADGHTRRIEAACKVWSAGVSASPLAKQL 286
Query: 196 ----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
P GRI + L +P +VF +GD + LP +AQ A + G+Y
Sbjct: 287 AEQTGAPLDRAGRISVGADLTLPGQPNVFVIGDM------MSRDQLPGVAQTAIQGGRYA 340
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
+ R A+ + PF YR GSMAT+ R+ A+ + + +G
Sbjct: 341 ARHIAR-------EADGTSLPQDRAPFRYRDKGSMATVCRFSAVAQVGR------FEFSG 387
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
F++WL+W + +L +V +R+R ++W ++F+
Sbjct: 388 FIAWLLWLAVHLVYIVGFRSRIATLLSWTSSFL 420
>gi|217974378|ref|YP_002359129.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS223]
gi|217499513|gb|ACK47706.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Shewanella baltica OS223]
Length = 429
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 25/322 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ALG +++F G E+ FL + +A KLL L+ E
Sbjct: 110 QIDYDFLVLALGGVSNSFNTLGADEHCIFLDSLENANLFHHKLLDALL-------QLNET 162
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
+ +VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +R
Sbjct: 163 QERVSIGIVGAGATGVELAAELHHVIESVKEYGYLNIAKHHLDVHLIEASPKILPQLPER 222
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLD 196
+ A L K G+RL G+ VK+V I DG + GL VW+ GV GP
Sbjct: 223 VSARAQAVLDKIGIRLHIGVQVKEVTRDGFITQDGDVIKAGLKVWAAGVKGPKAFQNFTK 282
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLL 255
LP +P ++ +D+ +RV QD++AVGDC+ ++S+G+ V P AQ A + LF +++
Sbjct: 283 LPITPRNQVEVDDCMRVKGHQDIYAVGDCALLIQSSGQPV-PPRAQAAAQMADTLFDNIV 341
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
NR+ G+ A F+Y+ GS+ ++ R+ A+ +L N S + G ++
Sbjct: 342 NRL----QGKPEKA--------FIYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIAR 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAV 337
L++ S Y + S F V
Sbjct: 390 LMYISLYQRHLASLYGWFSAIV 411
>gi|300781215|ref|ZP_07091069.1| NADH dehydrogenase [Corynebacterium genitalium ATCC 33030]
gi|300532922|gb|EFK53983.1| NADH dehydrogenase [Corynebacterium genitalium ATCC 33030]
Length = 466
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 162/335 (48%), Gaps = 32/335 (9%)
Query: 17 PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGIS 76
P+ + YD L++A GA S FG E A L+ + HA EIR +L+ ++V
Sbjct: 103 PYTYTYEYDSLIVAAGAGQSYFGNDHFAEFAPGLKTLDHALEIRSRLVTAFERAEVTE-D 161
Query: 77 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 134
E+ RLL V+VG GPTGVE +G++++ R R YSH + + L++ A ++L
Sbjct: 162 PAERERLLTFVIVGAGPTGVELAGQIAEMAHRSFRNEYSHFRPSSAKIILLDGAPQVLPP 221
Query: 135 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL-----VWSTGVGP 188
F RL A +L + GV + + +V ++D + D + +WS GV
Sbjct: 222 FGKRLGRKAQRELERIGVTVHLNSMVTNIDETSVTYKDMETEEETTIESYTKIWSAGVAA 281
Query: 189 STLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244
S L K L G++ +++ L V ++VF VGD + LP LAQVA
Sbjct: 282 SPLGKLVADQAGLEVDRAGKVPVNKDLSVGDHRNVFVVGDMMNLDK------LPGLAQVA 335
Query: 245 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 304
+ G+Y KA + ++ + +PF Y GSMA + R+ A+V + +
Sbjct: 336 IQTGEY-------AAKAIKDGVENDQEPDQREPFEYFDKGSMAIVSRFHAVVKMGK---- 384
Query: 305 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ +AGFL W++W +++ +VS RNR W
Sbjct: 385 --VEIAGFLGWIMWLLVHVSFLVSKRNRIVSMFTW 417
>gi|46111191|ref|XP_382653.1| hypothetical protein FG02477.1 [Gibberella zeae PH-1]
Length = 693
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 145/248 (58%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL++++ A++IR +++ N L+++P S+E
Sbjct: 265 RFYVPYDKLVIAVGSTTNPHGVKGL-ENAFFLKDINDARKIRNQVIQNFELANLPTCSDE 323
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL V GGGPTGVEF+ EL D + D+ + + +++ I V LI++ + IL+++D
Sbjct: 324 ERKRLLSFCVSGGGPTGVEFAAELFDLLNEDLTRHFPRLLRNEISVHLIQSRSHILNTYD 383
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILND-----GT---EVPYGLLVWSTGVG 187
+ + YA + ++ V + VK+V K+I GT E+P G +WSTGV
Sbjct: 384 ETVSRYAEDRFARDQVDVQTNSRVKEVLPDKIIFTQKQEGGGTITKELPIGFCLWSTGVS 443
Query: 188 PSTLVKSL--DLPKSPGGR--IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ ++L L KS R + D LR+ + DV+A+GDCS + V+ L
Sbjct: 444 QTQFCQTLAAKLRKSQTNRHALETDTHLRLNGSPMGDVYAIGDCSTVQNNVADHVVTFLR 503
Query: 242 QVAERQGK 249
+A ++GK
Sbjct: 504 SLAWKRGK 511
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 18/124 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMA 287
T LPA AQ A +QG+YL NR+ + G A D+ GD F Y+HLGS+A
Sbjct: 576 TSLPATAQRAHQQGQYLARKFNRMTRLHEGL--DANDIRDGDVDAAVYKAFEYKHLGSLA 633
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+G A+ D +G S+AG L W V WRS Y + VS R R +A++W +F
Sbjct: 634 YVGN-SAIFDW-----GEGRSIAGGL-WAVYAWRSVYFAQSVSLRTRLLMAMDWTKRGLF 686
Query: 346 GRDI 349
GRD+
Sbjct: 687 GRDL 690
>gi|407929805|gb|EKG22615.1| hypothetical protein MPH_00083, partial [Macrophomina phaseolina
MS6]
Length = 275
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 153/292 (52%), Gaps = 33/292 (11%)
Query: 70 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-A 128
+ +P ++ + LLH +VGGG G+E + EL D D+R Y H+ + +T+ + A
Sbjct: 6 ASLPTVAPPRQRDLLHIRIVGGGAIGIEAAAELWDCWHEDLRHVYPHLDGKLAITIHDVA 65
Query: 129 NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 187
+IL +FD L YAT L V L ++ V+ ++ + +P+G+L+W+TG
Sbjct: 66 PQILGTFDASLSEYATKSLEGKQVELKTSNHIERVERDHIVTKEDGRLPFGMLIWATGNK 125
Query: 188 PSTLVKSLDLPKSPGG---RIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPA 239
S L++ + + P R+ D++LRV ++ V+A+GD +G +E LP
Sbjct: 126 ASPLIEEMQGVRKPAKGLPRLLTDKYLRVLREDGEPIEGVYALGD-AGDIEGES---LPT 181
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
LA+VA ++G+YL LN+ G G+ + PF Y+ +A +GR+ ++ R
Sbjct: 182 LAEVALQKGEYLVDQLNK----GDGQPDR--------PFEYKQRALLAYLGRHDGVIGGR 229
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
+ E GLS +WL WRS L SWR + ++++W ++ GRDI+R
Sbjct: 230 E--EWTGLS-----AWLAWRSGSLAWTRSWRRKIMISISWLFVWLGGRDIAR 274
>gi|387907200|ref|YP_006337536.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Blaberus
giganteus)]
gi|387582093|gb|AFJ90871.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Blaberus
giganteus)]
Length = 432
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 164/327 (50%), Gaps = 19/327 (5%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++SYD L++A G+ + FG ++ A ++ + A +R +L + + + +++EK
Sbjct: 100 RLSYDYLIVATGSVTNYFGNKNIESFALPMKSIPEALNLRSVILQDFETALLTK-NDKEK 158
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
RL+ V+VGGGPTGVE +G L++ + Y + ++++ L++A + +L ++
Sbjct: 159 KRLMTFVIVGGGPTGVELAGALAEMKKYVLPHDYPDLDIQHMNIHLLQATSRLLDGMSEQ 218
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
A L + GV + + +VKD + + + + ++ ++W+ GV + L K
Sbjct: 219 SAKQAYKNLKELGVIIWLNSLVKDYNGEVVFMEKNKKIESSNVIWAAGVKGAIL-KGFIK 277
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQGKYLFSLLN 256
G RI +D +L+ ++FA+GD + E+ P AQ A +QG +L LN
Sbjct: 278 EDVKGNRILVDNYLKTIKYNNIFAIGDVAYMNENKHYPNGHPMTAQPAIQQGNHLAKNLN 337
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ PFVY++LGSMATIGR KA+ D L L GFL+W+
Sbjct: 338 CFLFDNDNKTKM-------KPFVYKNLGSMATIGRNKAVCDFPY------LKLKGFLAWI 384
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTF 343
VW +L +V +RN+ NW +
Sbjct: 385 VWMFVHLISLVGFRNKAIALTNWIIQY 411
>gi|418407009|ref|ZP_12980327.1| NADH dehydrogenase [Agrobacterium tumefaciens 5A]
gi|358006153|gb|EHJ98477.1| NADH dehydrogenase [Agrobacterium tumefaciens 5A]
Length = 421
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 165/333 (49%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I +D LV+A GA + FG + A L+ + A IRR+LLL +++ SEEE+
Sbjct: 96 IGFDTLVLATGARHAYFGRDEWERAAPGLKTLEDATTIRRRLLLAFERAEL-ATSEEERQ 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
L V++G GPTGVE +G +++ + + + +V V L+EA +L F D L
Sbjct: 155 AQLTFVIIGAGPTGVEMAGMIAELAHKALPPEFRNVDTRKSRVLLVEAGPRVLPVFTDDL 214
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L K GV ++ G + + + T P +VW+ GV S K L+
Sbjct: 215 SAYAKQALEKLGVEVLLGTPVTACTDEGVTVGETFYPCRTVVWAAGVQASPAAKWLNAAA 274
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR + L + ++F +GD + + GK V P +A A++QG ++ ++
Sbjct: 275 DRAGRAIVGPHLNLEDDPNIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAHVAKVI---- 329
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+A + + E PF Y H G++ATIG+ A++D + K L G L+W +W
Sbjct: 330 -----KARLSGEPEPA-PFRYSHQGNLATIGKRAAVIDFGRFK------LKGVLAWWIWG 377
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 378 LAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|15225428|ref|NP_179673.1| NAD(P)H dehydrogenase B4 [Arabidopsis thaliana]
gi|75206552|sp|Q9SKT7.1|NDB4_ARATH RecName: Full=NAD(P)H dehydrogenase B4, mitochondrial; Flags:
Precursor
gi|4454468|gb|AAD20915.1| putative NADH-ubiquinone oxireductase [Arabidopsis thaliana]
gi|91806220|gb|ABE65838.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Arabidopsis thaliana]
gi|330251980|gb|AEC07074.1| NAD(P)H dehydrogenase B4 [Arabidopsis thaliana]
Length = 582
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 141/235 (60%), Gaps = 12/235 (5%)
Query: 2 KVHCETVTDELRTLE-PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
K+HC + E +L+ +F + YD L++A+GA+ +TF GV+E+A FL+E A IR
Sbjct: 146 KIHCRS--KEGSSLKGTTEFDMDYDILILAVGAKPNTFNTPGVEEHAYFLKEAEDALNIR 203
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
++ + +P ++EEE+ ++LH VVVGGGPTGVEFS EL DF+++DV + Y V+++
Sbjct: 204 HSVIDCFERASLPNLTEEERKKILHFVVVGGGPTGVEFSAELHDFLVQDVAKIYPKVQEF 263
Query: 121 IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKD-VDSQKLILNDGT 173
+TL+EA + IL+ FD R+ +A + + G+ L V G+ D + +++
Sbjct: 264 TKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDLKTGSMVVGVTADEISTKERETGKIV 323
Query: 174 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
PYG++VWSTG+G ++K G R + DEWLRV V+A+GD +
Sbjct: 324 SEPYGMVVWSTGIGSRPVIKDFMQQIGQGQRRVLATDEWLRVEGCDGVYALGDTA 378
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 292
LPA AQVA +QGKYL N++ K + G PF YRH GS A +G
Sbjct: 468 LPATAQVASQQGKYLAKCFNKMEKCEKKPEGPLRFRGEGRHRFQPFRYRHFGSFAPLGGE 527
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ +L + S G S WL W S Y +++VSWR R V +W FVFGRD S I
Sbjct: 528 QTAAELPGDWVSIGHSS----QWL-WYSVYASKLVSWRTRMLVISDWTRRFVFGRDSSSI 582
>gi|433775444|ref|YP_007305911.1| NADH dehydrogenase, FAD-containing subunit [Mesorhizobium
australicum WSM2073]
gi|433667459|gb|AGB46535.1| NADH dehydrogenase, FAD-containing subunit [Mesorhizobium
australicum WSM2073]
Length = 421
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 176/337 (52%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+A GA + FG + A L+ + A IRR++LL ++ E + +
Sbjct: 98 VAYDTLVLATGARHAYFGHDEWEPFAPGLKTLEDATTIRRRILLAFEQAE----RESDPA 153
Query: 82 R---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFD 136
R LL V+VGGGPTGVE +G +++ +R + ++ V LIEA + IL++F
Sbjct: 154 RRQALLTIVIVGGGPTGVELAGTIAELAHDTLRGEFRNIDTRQTRVVLIEAGDRILANFA 213
Query: 137 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
+L YA L + GV + G V D+ ++ D T +P ++W+ GV S + L
Sbjct: 214 PKLSDYARKALERLGVSVELGRAVTRCDADGVVFGD-TILPARTILWAAGVAASPAAEWL 272
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GR+ ++ L VP ++F +GD + L G+ V P +A A+++G+++ + +
Sbjct: 273 EAKADRAGRVLVEPDLSVPGSPEIFVIGDAAHVLRPDGRPV-PGVAPSAKQEGRHVAATV 331
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
+A A D PF Y+H G +ATIG+ A +D + L G+L+W
Sbjct: 332 ---------KARLAGDTS-PRPFHYKHAGDLATIGKRAAAIDF------GWIKLTGWLAW 375
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W A++ ++ +RNR V+++W +V G+ +R+
Sbjct: 376 WLWGIAHIYFLIGFRNRLAVSLSWLWIYVTGQRSARL 412
>gi|413921325|gb|AFW61257.1| hypothetical protein ZEAMMB73_607293 [Zea mays]
Length = 577
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 134/234 (57%), Gaps = 11/234 (4%)
Query: 2 KVHCETVTDELRTLE-PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
K+HC + +LE +F + YD LV+A+GA +TF GV EN FL+EV AQ+IR
Sbjct: 138 KIHCRSNVGT--SLEGNGEFLVDYDYLVVAVGARTNTFNTPGVVENCHFLKEVEDAQKIR 195
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P ++EEE+ + LH VVVGGGPTGVEF+ L DF+ D+ + Y ++
Sbjct: 196 RSVMDCFERASLPFLNEEERKKNLHFVVVGGGPTGVEFAASLHDFVTEDLSKLYPSIQHL 255
Query: 121 IHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---E 174
+ ++LIE A+ IL+ FD R+ ++A + + G+ + G +VK + N T
Sbjct: 256 VKISLIEAADHILTMFDKRITNFAEDKFGRDGIDVKTGYKVVKVSKDDITMQNPATGDIS 315
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
VPYG+ VWSTG+G V R + DEWLRV V+A+GDC+
Sbjct: 316 VPYGMAVWSTGIGTRPFVVEFMKQIGQANRRVLATDEWLRVRECDGVYAIGDCA 369
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL N++ A + G PF YRHLG A +G
Sbjct: 463 LPATAQVASQQGQYLARCFNKMKDAEENPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGE 522
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L +S+ WL W S Y T+ +SWR R V +W F+FGRD S I
Sbjct: 523 QTAAQL----PGDWISIGHSSQWL-WYSVYATKQISWRTRMLVVSDWTRRFIFGRDSSCI 577
>gi|308800844|ref|XP_003075203.1| external rotenone-insensitive NADPH dehydrogenase (ISS)
[Ostreococcus tauri]
gi|116061757|emb|CAL52475.1| external rotenone-insensitive NADPH dehydrogenase (ISS), partial
[Ostreococcus tauri]
Length = 589
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 131/232 (56%), Gaps = 15/232 (6%)
Query: 10 DELRTLEPWK-FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 68
D+L + WK F + YD LV A+GA +TFG+ GV+E+ F +E+ HA RR++
Sbjct: 163 DDLAKSQAWKEFDLEYDYLVTAVGAVPNTFGVPGVQEHCMFFKEIEHAARFRREVNERFE 222
Query: 69 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIE 127
+ +PG+ E +LL VV+G GPTGVE + EL D++ +DV + + S + + + +I+
Sbjct: 223 CATLPGVPRERIQQLLKFVVIGAGPTGVELAAELYDYVYQDVAKTFPSRLLKDVSIEIID 282
Query: 128 ANE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLL 180
E ILS++D R+ YAT ++ ++ + G VK+V +++ D EVP+G+
Sbjct: 283 LQEKILSTYDRRIAEYATEFFQRANIKCILGAAVKEVKDGAVVIADKDGSNQREVPFGIA 342
Query: 181 VWSTGVGPSTLVKSL--DLPKSPGGR---IGIDEWLRVP-SVQDVFAVGDCS 226
VW TG+ + + L LP+ + D+ LRV S +FA+GDC+
Sbjct: 343 VWCTGIKLNPFCEKLMDSLPEGAQENKRSLATDKNLRVKGSNGTIFALGDCA 394
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 233 GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG---DPFVYRHLGSMATI 289
G LPA AQVA++QG+YL S N ++A D L F Y H GS+A +
Sbjct: 480 GLRALPATAQVAKQQGQYLASFFNE---------SAADDERLQRGVARFDYVHKGSLAYV 530
Query: 290 GRYKALVDLRQNKESKGLS-LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
G+ A+ D+ G L G + L+W+S VS RN VA + T +FGRD
Sbjct: 531 GKDAAVADI------PGFGILKGIAAGLIWKSFETISQVSPRNVLLVAADMLRTKIFGRD 584
Query: 349 ISRI 352
ISR+
Sbjct: 585 ISRL 588
>gi|169769372|ref|XP_001819156.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus oryzae RIB40]
gi|83767014|dbj|BAE57154.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863936|gb|EIT73235.1| NADH-dehydrogenase [Aspergillus oryzae 3.042]
Length = 685
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 137/246 (55%), Gaps = 16/246 (6%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
F + YDKLVI +G + G+ G+ EN FL+ + A++I+ ++L N+ L+ +P S+E
Sbjct: 260 NFYVPYDKLVIGVGCTTNPHGVKGL-ENCHFLKTIDDARQIKNQVLENMELACLPTTSDE 318
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + + ++ I V +I++ IL+++D
Sbjct: 319 ERKRLLSFVVCGGGPTGVEFAAELFDLLNEDLLYSFPKILRNEISVHIIQSRTHILNTYD 378
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLI---LNDG----TEVPYGLLVWSTGVGP 188
+ L YA + ++ V L VK+V K++ + DG E+P G +WSTGV P
Sbjct: 379 EALSKYAEARFARDHVDVLTNSRVKEVRDDKVVFTQMEDGKPVLKEIPMGFCLWSTGVAP 438
Query: 189 STLVKSLDL---PKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+ + K L ++ + D LR+ + DV+A+GDCS + ++ L +
Sbjct: 439 AEICKKLSAKLDAQNNKHALETDSHLRLIGAPLGDVYAIGDCSTVQNNVADHIVSFLRTI 498
Query: 244 AERQGK 249
A +GK
Sbjct: 499 AWEKGK 504
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKA-GGGRANSAKDMELGDP----FVYRHLGSMATI 289
T LPA AQ A +QG+YL L +I A G RAN +L + F Y+HLGS+A I
Sbjct: 569 TSLPATAQRANQQGEYLGRKLTKIAAALPGMRANEIDHGDLDEAVYKAFKYKHLGSLAYI 628
Query: 290 GRYKALVDLRQNKESKGLSLAG-FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
A+ D G++ +G L+ +WRS Y VS R R +A++WA +FGRD
Sbjct: 629 SN-AAVFDF------GGMNFSGGVLAMYLWRSVYFAESVSLRTRCMLAMDWAKRALFGRD 681
Query: 349 I 349
+
Sbjct: 682 L 682
>gi|238501840|ref|XP_002382154.1| NADH-ubiquinone oxidoreductase 64 kDa subunit, putative
[Aspergillus flavus NRRL3357]
gi|220692391|gb|EED48738.1| NADH-ubiquinone oxidoreductase 64 kDa subunit, putative
[Aspergillus flavus NRRL3357]
Length = 685
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 137/246 (55%), Gaps = 16/246 (6%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
F + YDKLVI +G + G+ G+ EN FL+ + A++I+ ++L N+ L+ +P S+E
Sbjct: 260 NFYVPYDKLVIGVGCTTNPHGVKGL-ENCHFLKTIDDARQIKNQVLENMELACLPTTSDE 318
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + + ++ I V +I++ IL+++D
Sbjct: 319 ERKRLLSFVVCGGGPTGVEFAAELFDLLNEDLLYSFPKILRNEISVHIIQSRTHILNTYD 378
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLI---LNDG----TEVPYGLLVWSTGVGP 188
+ L YA + ++ V L VK+V K++ + DG E+P G +WSTGV P
Sbjct: 379 EALSKYAEARFARDHVDVLTNSRVKEVRDDKVVFTQMEDGKPVLKEIPMGFCLWSTGVAP 438
Query: 189 STLVKSLDL---PKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+ + K L ++ + D LR+ + DV+A+GDCS + ++ L +
Sbjct: 439 AEICKKLSAKLDAQNNKHALETDSHLRLIGAPLGDVYAIGDCSTVQNNVADHIVSFLRTI 498
Query: 244 AERQGK 249
A +GK
Sbjct: 499 AWEKGK 504
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKA-GGGRANSAKDMELGDP----FVYRHLGSMATI 289
T LPA AQ A +QG+YL L +I A G RAN +L + F Y+HLGS+A I
Sbjct: 569 TSLPATAQRANQQGEYLGRKLTKIAAALPGMRANEIDHGDLDEAVYKAFKYKHLGSLAYI 628
Query: 290 GRYKALVDLRQNKESKGLSLAG-FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
A+ D G++ +G L+ +WRS Y VS R R +A++WA +FGRD
Sbjct: 629 SN-AAVFDF------GGMNFSGGVLAMYLWRSVYFAESVSLRTRCMLAMDWAKRALFGRD 681
Query: 349 I 349
+
Sbjct: 682 L 682
>gi|311744479|ref|ZP_07718280.1| pyridine nucleotide-disulfide oxidoreductase [Aeromicrobium marinum
DSM 15272]
gi|311312284|gb|EFQ82200.1| pyridine nucleotide-disulfide oxidoreductase [Aeromicrobium marinum
DSM 15272]
Length = 452
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 173/333 (51%), Gaps = 34/333 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD L++A G + FG G +E L + A ++R + NL + G +
Sbjct: 104 VSYDYLILANGVTTNYFGTPGAEEFGIPLYKRSDALKVRDTMFANLEEFAINGQDSD--- 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDDRL 139
L VVVGGG TGVE +G L++F D+ Y + + IH+TL+E A +L F ++L
Sbjct: 161 --LRLVVVGGGATGVETAGALAEFRNDDMPTTYPELDRSRIHITLLEMAPHVLGPFHEKL 218
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILN-DGTE--VPYGLLVWSTGVGPSTLVKSL 195
R YA L K V L G VK+V + +++ DG E +P G++VW+TGV V
Sbjct: 219 RDYAKKSLEKRHVDLRLGTAVKEVRADGVVVERDGVEEFLPAGIVVWATGVTAHPTVLDW 278
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
++P+ GGR+ +DE RV + + FA+GD S G LP LAQ A + GK++ +
Sbjct: 279 NVPQGRGGRVEVDEHQRVKGLPNTFAIGDI-----SIGPDPLPQLAQPAIQGGKHVAKFI 333
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS-LAGFLS 314
K GR PF Y G+MATIG+ A+ ++ KGL L GF +
Sbjct: 334 RAEIK---GRTVK--------PFKYSDKGTMATIGKSSAIAEI------KGLPRLKGFPA 376
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
W++W ++ ++ RNRF +N ++ ++F R
Sbjct: 377 WIIWVGLHVATLLGNRNRFATMINLSSKYLFRR 409
>gi|358459000|ref|ZP_09169203.1| NADH dehydrogenase (ubiquinone) [Frankia sp. CN3]
gi|357077656|gb|EHI87112.1| NADH dehydrogenase (ubiquinone) [Frankia sp. CN3]
Length = 504
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 169/333 (50%), Gaps = 36/333 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A GA S FG E+A ++ + A E+R ++L L++ E + RL
Sbjct: 120 YDSLIVAAGAGQSYFGNDQFAEHAPGMKSIDDALELRGRILGMFELAEA-STDEADIERL 178
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANEI-LSSFDDRLRH 141
L VVVG GPTGVE +G++++ R +R+ + + + L++A + L +F D+L
Sbjct: 179 LTFVVVGAGPTGVEMAGQIAELAHRTLRRDFRSIDPRKARIVLLDAAPVVLPAFGDKLGA 238
Query: 142 YATTQLSKSGVRLVRG-IVKDVDSQKLILN--DGTE--VPYGLLVWSTGVGPSTLVKSLD 196
YA +L K GV + G +V DVD+ + + DGT + VW+ GV S L + L
Sbjct: 239 YAVQRLEKLGVEVQLGAMVTDVDATGIEVKNADGTRRRIESVCKVWAAGVQASPLGRQLA 298
Query: 197 LPKSPG----GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 252
G GR+ ++ L +P +V+ VGD + LP +AQVA + G++
Sbjct: 299 QQSGAGLDRAGRVQVEPDLTLPGHPEVYVVGDMISLNQ------LPGVAQVAIQGGRHAA 352
Query: 253 -SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
+ RI + E G F Y GSMATI R+ A+ + + L L G
Sbjct: 353 RDIRARI-----------EGRESGRLFKYHDKGSMATISRFSAVASIGR------LKLTG 395
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
F++WL+W + +L ++ +++R ++WA +FV
Sbjct: 396 FVAWLMWLAVHLVYIIGFKHRVTTLLHWAVSFV 428
>gi|111025624|ref|YP_708044.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|110824603|gb|ABG99886.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
Length = 507
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 166/336 (49%), Gaps = 36/336 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L+++ GA+ S FG E+A ++ + A E+R ++L +++ +E+++L
Sbjct: 152 YDSLIVSAGAQQSYFGNDHFAEHAPGMKTIDDALELRGRILAAFDHAEL-ATDPDERAKL 210
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH--VKDYIHVTLIEANEILSSFDDRLRH 141
L VVVG GPTGVE +G+L++ R + Y + +D + + A +L F L
Sbjct: 211 LTFVVVGAGPTGVEMAGQLTELAHRTLVGAYRNFDTRDARIILVDAAATVLPPFGTNLGT 270
Query: 142 YATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKSL- 195
A L K GV + G V DVD+ L + D + VWS GV S L L
Sbjct: 271 KAAAVLEKLGVEIRLGSTVTDVDADGLTVRDTAGENHRIDAVCKVWSAGVAASPLGAQLA 330
Query: 196 -----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+L ++ GRI ++E L VP +VF VGD + LP +AQVA + G Y
Sbjct: 331 EQAGAELDRA--GRIAVEEDLTVPGHPNVFVVGDM------MSRDRLPGVAQVAIQGGCY 382
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+ KA A+D + D PF YR GSMA I R+KA+ + + L
Sbjct: 383 AAKQITYQVKA------LAEDRPVPDRTPFRYRDKGSMAIIARFKAVTKIGR------LE 430
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L GFL+W++W + ++ VV +R+R ++W T +
Sbjct: 431 LTGFLAWVLWLAVHVVYVVGFRSRLATLLSWTWTLL 466
>gi|342873490|gb|EGU75657.1| hypothetical protein FOXB_13845 [Fusarium oxysporum Fo5176]
Length = 691
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 143/248 (57%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLV+A+G+ + G+ G+ ENA FL++++ A+ IR +++ N L+++P +E
Sbjct: 265 RFYVPYDKLVVAVGSTTNPHGVKGL-ENAYFLKDINDARMIRNQVIQNFELANLPTCPDE 323
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEAN-EILSSFD 136
E+ RLL V GGGPTGVEF+ EL D + D+ + + +++ I V LI++ IL+++D
Sbjct: 324 ERKRLLSFCVSGGGPTGVEFAAELFDLLNEDLTRHFPRLLRNEISVHLIQSRGHILNTYD 383
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 187
+ + YA + ++ V L VK+V K+I DGT E+P G +WSTGV
Sbjct: 384 ETVSRYAEERFARDQVDVLTNSRVKEVLPDKIIFTQKQEDGTMITKELPIGFCLWSTGVS 443
Query: 188 PSTLVKSL--DLPKSPGGR--IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ ++L L KS R + D LR+ + DV+A+GDCS + ++ L
Sbjct: 444 QTQFCQTLAAKLGKSQTNRHALETDTHLRLNGSPLGDVYAIGDCSTVQNNVADHIVTFLR 503
Query: 242 QVAERQGK 249
+A ++GK
Sbjct: 504 SLAWKRGK 511
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 18/124 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMA 287
T LPA AQ A +QG+YL N++ + G +A D+ GD F Y+HLGS+A
Sbjct: 576 TSLPATAQRAHQQGQYLARKFNKMARMHEGL--NANDIREGDVDAAVYKAFEYKHLGSLA 633
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
+G A+ DL +G SLAG L W V WRS Y + VS R R +A++W +F
Sbjct: 634 YVGN-SAIFDL-----GEGRSLAGGL-WAVYAWRSVYFAQSVSLRTRLLMAMDWTKRGLF 686
Query: 346 GRDI 349
GRD+
Sbjct: 687 GRDL 690
>gi|322436833|ref|YP_004219045.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Granulicella tundricola MP5ACTX9]
gi|321164560|gb|ADW70265.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Granulicella tundricola MP5ACTX9]
Length = 463
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 171/335 (51%), Gaps = 20/335 (5%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD L++A G+ S FG A L+ V A EIRR++LL L++ + E
Sbjct: 104 ELEYDYLIVASGSTHSYFGNDKWAATAPGLKTVEDAIEIRRRVLLAFELAERQTL-EVGS 162
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
L+ VV+GGGPTGVE +G +SD + + + H+ V ++E + IL+++ D
Sbjct: 163 HPALNFVVIGGGPTGVELAGAISDIAKLYMARDFRHIDPSSAQVMILEGSPHILAAYPDD 222
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L+ A QL + GV++ G V DV +++ D + +W+ GV S L K L +
Sbjct: 223 LQEKALEQLRELGVKVRTGARVTDVQPGYVMVED-ERIDSVCTLWAAGVQASPLGKLLGV 281
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
G + +D++L + +VF GD + ++ GK V P +AQ A + G Y R
Sbjct: 282 ETDNKGLVMVDQFLNPKGMPEVFVCGDLAHVMQD-GKQV-PGVAQPAMQMGTYA---AKR 336
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
IG A G A+ F Y G MATIGR A+ +++ KG +GF +W+
Sbjct: 337 IGHAIEGAADKKG-------FRYFDKGDMATIGRSAAVANIKW--PFKG-HWSGFPAWMT 386
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W S ++ ++ +RNRF V WA T+V D +R+
Sbjct: 387 WLSVHIFFLIGFRNRFSVFRQWAWTYVALSDGARL 421
>gi|261313448|ref|ZP_05952645.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M163/99/10]
gi|261302474|gb|EEY05971.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M163/99/10]
Length = 424
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R +A +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAMAWSWLWTYITGQHSARL 413
>gi|340792211|ref|YP_004757675.1| NADH dehydrogenase [Brucella pinnipedialis B2/94]
gi|340560670|gb|AEK55907.1| NADH dehydrogenase [Brucella pinnipedialis B2/94]
Length = 441
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 115 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 174
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 175 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 232
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R +A +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAMAWSWLWTYITGQHSARL 430
>gi|440731632|ref|ZP_20911628.1| NADH dehydrogenase [Xanthomonas translucens DAR61454]
gi|440371512|gb|ELQ08353.1| NADH dehydrogenase [Xanthomonas translucens DAR61454]
Length = 430
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 28/337 (8%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L++A GA + FG +A L+ + A +RR LLL ++ ++
Sbjct: 94 LDYDYLLVATGATHAYFGHDEWARHAPGLKTLDDALHLRRHLLLAFERAEAES-DPAARA 152
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
L +VGGG TGVE +G L++ ++ + + V LIEA +L+SF +RL
Sbjct: 153 AWLSFAIVGGGLTGVELAGTLAEIARHTLKHEFRRIDPAQAKVRLIEAGPRVLASFPERL 212
Query: 140 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A QL K GV ++ G+ V D+D+ L T VP +VW+ GV S L ++LD+P
Sbjct: 213 SAKAQKQLEKLGVDVLTGVPVADIDASGYRLGS-TFVPARTVVWAAGVAASPLGRTLDVP 271
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ + L +P +VF GD + ++ GK V P +A A++ G+++
Sbjct: 272 LDRSGRVQVQPDLSIPGHPEVFVAGDLAALQQADGKPV-PGVAPAAKQMGRHV------- 323
Query: 259 GKAGGGRANSAKDM--ELGD-PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
AG N AK + E GD PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 324 --AG----NLAKRLRGEPGDAPFRYADYGNLATIGRMAAIVHLGR------LQLSGLLAW 371
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W +A++ ++ +RNR V +NWA + + +RI
Sbjct: 372 WFWLAAHVFFLIGFRNRLVVLLNWAWAYWSYQRAARI 408
>gi|322709931|gb|EFZ01506.1| putative alternative NADH dehydrogenase [Metarhizium anisopliae
ARSEF 23]
Length = 688
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 146/248 (58%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ +NA FL++++ A++IR +++ N+ ++ +P S+E
Sbjct: 263 RFYVPYDKLVIAVGSVTNPHGVKGL-DNAFFLKDINDARKIRNQVIRNIEVACLPTTSDE 321
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ E+ D + D+ + + +++ I V LI++ + IL+++D
Sbjct: 322 ERKRLLSFVVSGGGPTGVEFAAEMYDLLNEDLTRHFPRLLRNEISVHLIQSRSHILNTYD 381
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 187
+ + YA + ++ V L VK+V K++ DG+ E+P G ++WSTGV
Sbjct: 382 ETVSKYAEDRFARDQVDVLTNSRVKEVCPDKIVFTQKQEDGSLVTKELPAGFVLWSTGVS 441
Query: 188 PSTLVKSL--DLPKSPGGRIGI--DEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
P+ L K L L R + D LR+ + DV+A+GDCS + ++ L
Sbjct: 442 PTALCKKLAHKLGNVQTNRHALETDTHLRLNGTPLGDVYAIGDCSTVQNNIADHIITFLR 501
Query: 242 QVAERQGK 249
+A + GK
Sbjct: 502 TLAWKHGK 509
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMA 287
T LPA AQ A +QG YL N++ G SA D+ GD F Y HLGS+A
Sbjct: 574 TSLPATAQRAHQQGYYLAQKFNKLAHLSEGL--SANDIRDGDLDAAAYKAFEYHHLGSLA 631
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG A+ DL +G ++AG L W V WRS Y + VS+R R +A++WA +F
Sbjct: 632 YIGN-SAVFDL-----GEGWNVAGGL-WAVYAWRSVYFAQSVSFRTRCLLAMDWAKRGLF 684
Query: 346 GR 347
GR
Sbjct: 685 GR 686
>gi|261319314|ref|ZP_05958511.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis B2/94]
gi|265986686|ref|ZP_06099243.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M292/94/1]
gi|261298537|gb|EEY02034.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis B2/94]
gi|264658883|gb|EEZ29144.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M292/94/1]
Length = 424
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 176/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R +A +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAMAWSWLWTYITGQHSARL 413
>gi|218131053|ref|ZP_03459857.1| hypothetical protein BACEGG_02656 [Bacteroides eggerthii DSM 20697]
gi|317477061|ref|ZP_07936303.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides eggerthii
1_2_48FAA]
gi|217986757|gb|EEC53090.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides eggerthii
DSM 20697]
gi|316906854|gb|EFV28566.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides eggerthii
1_2_48FAA]
Length = 428
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 167/347 (48%), Gaps = 29/347 (8%)
Query: 5 CET--VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
CE V E LE ++YD LVIA G + + FG + + + L+ A R +
Sbjct: 86 CEAQRVMPENNLLETSIGTLAYDYLVIATGCDTNYFGNNDMAKQTMALKNTSEALFNRNQ 145
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYI 121
+L + + G +EEE+ RL+ +VGGG TG+E +G L++ + Q Y + + +
Sbjct: 146 ILDSFEQAQNTG-NEEERKRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEM 204
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
+ LI+ A +LS+F ++ L K V + + V + + +L+L++G +
Sbjct: 205 RIILIDGAPRLLSAFSEKSSREVMEYLGKRNVEVKLNARVINYEGNELVLSEGPVIDTKN 264
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+ W GV ++L PG R+ +D + R+ ++FA+GD + P
Sbjct: 265 VFWVAGVKANSLQGLPSEAYGPGNRLKVDSYNRLCEYSNIFAIGDTALMSSDAYPKGHPQ 324
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG---DPFVYRHLGSMATIGRYKALV 296
+ Q A +Q + L L R ME G PF+YR+ GSMATIGR A+V
Sbjct: 325 VVQPAIQQARNLIVNLQR--------------MEQGLPLQPFIYRNKGSMATIGRNHAVV 370
Query: 297 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+L++ L GF +W VW +L +V +NR ++ V+W ++
Sbjct: 371 ELKK------LRFGGFPAWAVWLFVHLMSIVGVKNRLFIFVDWMWSY 411
>gi|381399716|ref|ZP_09924735.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Microbacterium laevaniformans OR221]
gi|380772894|gb|EIC06579.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Microbacterium laevaniformans OR221]
Length = 441
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 166/359 (46%), Gaps = 39/359 (10%)
Query: 4 HCETVTDELRTLEPWKFK-ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
H + E RT+ + +SYD L++A G + G KEN+ + A IR
Sbjct: 72 HLMEIDPEARTVRLLDGQEMSYDYLLVANGVTTAYHRTPGAKENSFAVYSRSQAIAIRDT 131
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYI 121
L L + V + +++ L VV+GGGPTG+E +G L++ + + Y V D
Sbjct: 132 LFTRLERAAV----RDGRTKGLSVVVIGGGPTGIEMAGALAELRDQGLEPAYPELVGDAF 187
Query: 122 HVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLL 180
+TL++ +EIL F +LR YA QL + V L G V +V ++L+DG+ +P L
Sbjct: 188 RITLVQRSEILKPFLPKLRDYAAAQLRRRDVELRLGAGVDEVRPDAVVLSDGSVLPSDLT 247
Query: 181 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240
VW+TGV P V+ LP G RI + E L+V + VFA GD + P L
Sbjct: 248 VWATGVAPHEEVRDWSLPLDKGDRIRVGEDLQVEGLPGVFAAGDV-----AVSPQDYPQL 302
Query: 241 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 300
AQ A + G+++ + R+ AG + +PF Y G +A IGR A+ +L
Sbjct: 303 AQPAIQGGEHVARQIVRL-IAG----------QPTEPFSYYDKGQLAIIGRRAAIGELPG 351
Query: 301 NKESKGL----------------SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
GL +L G+ W+ W ++T ++ RN+ V + +
Sbjct: 352 IANLPGLHRLRFLSKIPLLRKTVALTGWFGWMTWLFVHITSLLGPRNKLMVLIGLVARY 410
>gi|19552680|ref|NP_600682.1| NADH dehydrogenase, FAD-containing subunit [Corynebacterium
glutamicum ATCC 13032]
gi|62390348|ref|YP_225750.1| NADH dehydrogenase [Corynebacterium glutamicum ATCC 13032]
gi|418246862|ref|ZP_12873251.1| NADH dehydrogenase [Corynebacterium glutamicum ATCC 14067]
gi|4688668|emb|CAB41413.1| NADH dehydrogenase [Corynebacterium glutamicum]
gi|21324233|dbj|BAB98858.1| NADH dehydrogenase, FAD-containing subunit [Corynebacterium
glutamicum ATCC 13032]
gi|41325685|emb|CAF21474.1| NADH DEHYDROGENASE [Corynebacterium glutamicum ATCC 13032]
gi|354509058|gb|EHE81998.1| NADH dehydrogenase [Corynebacterium glutamicum ATCC 14067]
gi|385143590|emb|CCH24629.1| NADH dehydrogenase, FAD-containing subunit [Corynebacterium
glutamicum K051]
Length = 467
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 175/352 (49%), Gaps = 39/352 (11%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+ V +TVT +L + YD LV+ GA S FG E A ++ + A EIR
Sbjct: 90 INVESQTVT---ASLGEFTRVFEYDSLVVGAGAGQSYFGNDHFAEFAPGMKSIDDALEIR 146
Query: 61 RKLLLNLMLSDVPGISEE--EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 118
+++ ++ I E+ E+ RLL VVVG GPTGVE +G+L++ R + Y +
Sbjct: 147 ARIIGAFERAE---ICEDPAERERLLTFVVVGAGPTGVELAGQLAEMAHRTLAGEYKNFN 203
Query: 119 -DYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI--LNDGT 173
+ + L++ A ++L F RL A L K GV + + +V +VD+ + DG
Sbjct: 204 TNSAKIILLDGAPQVLPPFGKRLGRNAQRTLEKMGVNVRLNAMVTNVDATSVTYKTKDGE 263
Query: 174 E--VPYGLLVWSTGVGPSTLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 227
E + +WS GV S L K + GR+ +++ L V ++VF VGD
Sbjct: 264 EHTIESFCKIWSAGVAASPLGKLVAEQTGVETDRAGRVMVNDDLSVGDQKNVFVVGDMMN 323
Query: 228 YLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMA 287
Y LP +AQVA + G+Y + +I GR+N+ + + F Y GSMA
Sbjct: 324 Y------NNLPGVAQVAIQSGEY---VAEQIEAEVEGRSNTER-----EAFDYFDKGSMA 369
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
TI R+ A+V + + + + GF+ W++W + ++ +V +RNRF A++W
Sbjct: 370 TISRFSAVVKMGK------VEVTGFIGWVLWLAVHIMFLVGFRNRFVSAISW 415
>gi|326520569|dbj|BAK07543.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
Query: 2 KVHCETVT-DELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+V+C DE P++F+++YDKLVIA GAE TF I GV+ENA FLREV+ AQ+IR
Sbjct: 206 EVYCTVAAGDEQLPANPYRFRVAYDKLVIASGAEPLTFNIKGVQENAIFLREVNEAQQIR 265
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD 109
RKLL NLMLS+ PG+SE EK RLLHCVVVGGGPTGVEFSGELSDFIMRD
Sbjct: 266 RKLLTNLMLSENPGLSEAEKKRLLHCVVVGGGPTGVEFSGELSDFIMRD 314
>gi|226491458|ref|NP_001143083.1| uncharacterized protein LOC100275557 [Zea mays]
gi|195613998|gb|ACG28829.1| hypothetical protein [Zea mays]
Length = 577
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 2 KVHCETVTDELRTLE-PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
K+HC + LE +F + YD LV+A+GA +TF GV EN FL+EV AQ+IR
Sbjct: 138 KIHCRSNVGT--NLEGNGEFLVDYDYLVVAVGARTNTFNTPGVVENCHFLKEVEDAQKIR 195
Query: 61 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 120
R ++ + +P ++EEE+ + LH VVVGGGPTGVEF+ L DF+ D+ + Y ++
Sbjct: 196 RSVMDCFERASLPFLNEEERKKNLHFVVVGGGPTGVEFAASLHDFVTEDLSKLYPSIQHL 255
Query: 121 IHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---E 174
+ ++LIE A+ IL+ FD R+ ++A + + G+ + G +VK + N T
Sbjct: 256 VKISLIEAADHILTMFDKRITNFAEDKFGRDGIDVKTGYKVVKVSKDDITMQNPATGDIS 315
Query: 175 VPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 226
VPYG+ VWSTG+G V R + DEWLRV V+A+GDC+
Sbjct: 316 VPYGMAVWSTGIGTRPFVVEFMKQIGQANRRVLATDEWLRVRECDGVYAIGDCA 369
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG+YL N++ A + G PF YRHLG A +G
Sbjct: 463 LPATAQVASQQGQYLARCFNKMKDAEENPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGE 522
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L +S+ WL W S Y T+ +SWR R V +W F+FGRD S I
Sbjct: 523 QTAAQL----PGDWISIGHSSQWL-WYSVYATKQISWRTRMLVVSDWTRRFIFGRDSSCI 577
>gi|239833783|ref|ZP_04682111.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ochrobactrum intermedium LMG 3301]
gi|444310641|ref|ZP_21146261.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum intermedium M86]
gi|239821846|gb|EEQ93415.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ochrobactrum intermedium LMG 3301]
gi|443486002|gb|ELT48784.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum intermedium M86]
Length = 422
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 171/335 (51%), Gaps = 22/335 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+ISYD LV+A GA + FG + A L+ + A IRR+LLL ++ E ++
Sbjct: 98 EISYDMLVLATGARHAYFGNDQWEALAPGLKALEDATTIRRRLLLAFERAERE-TDEAKR 156
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDR 138
LL +VGGGPTGVE +G +++ + + + ++ V L+EA IL++F +
Sbjct: 157 KALLTFAIVGGGPTGVELAGIIAELAKQTIWPEFRNIDTRQTRVMLLEAGPRILAAFPED 216
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA L K GV + GI VKD+ ++ + + + +P +W+ GV S L
Sbjct: 217 LSDYALRALEKLGVEVRLGIPVKDITAEGVTVGE-EFIPCRTAIWAAGVAASPAATWLGA 275
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GR+ + L VP D+F +GD + GK V P +A A++QG Y+ +++
Sbjct: 276 ESDRAGRVKVLSNLNVPGHDDIFVIGDTAWVEGPDGKPV-PGIAPAAKQQGAYVATVIK- 333
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ + PF Y+H G++ATIGR A+VD+ + K L G ++W
Sbjct: 334 ---------SRIEGQTPPMPFRYKHQGNLATIGRGAAVVDMGRFK------LKGIIAWWF 378
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 379 WGIAHIFFLIGTRSRAAVAWSWLWTYISGQHSARL 413
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 75 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD--VRQRYSHVKD----YIHVTLIEA 128
+SEE R+ H VVVG G G++ +L + +R + QR H+ + T++
Sbjct: 1 MSEE---RVPHLVVVGAGFGGLQLIHDLKNVNVRITLIDQRNHHLFQPLLYQVATTILAT 57
Query: 129 NEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTEVPYGLLVWSTG 185
+EI R ++ V + G V DVD+++ + L +GTE+ Y +LV +TG
Sbjct: 58 SEIAWPIRHLFR-------DRTEVTTLLGTVTDVDTERRQVQLENGTEISYDMLVLATG 109
>gi|119356447|ref|YP_911091.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chlorobium phaeobacteroides DSM 266]
gi|119353796|gb|ABL64667.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chlorobium phaeobacteroides DSM 266]
Length = 435
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 170/333 (51%), Gaps = 30/333 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+A G + FG + ++ A L+ + A+EIRR+++ ++ E+
Sbjct: 95 IPYDYLVLACGVQHHYFGNNQWEKFAPGLKTLAQAKEIRRRVMEAYECAERTK-DPVERK 153
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFDDRL 139
+LL V+VGGGPTGVE +G + + + + Y ++ + + ++EA IL SF L
Sbjct: 154 KLLTFVIVGGGPTGVELAGSIGEMSRYTLSKFYRNIDPKLTRIFIVEAAPRILGSFSPEL 213
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
AT L K GV++ +V DVD+ + + + + ++W+ GV + K++ L
Sbjct: 214 TSKATRSLEKLGVQVWTSSMVTDVDANGVQIGN-ERIEAATVLWAAGVTAIAIGKNMGLE 272
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GRI ++E L +P ++FA GD + + GKT LP LA VA +QG+ +
Sbjct: 273 TDHLGRILVNEDLSIPGHPELFAGGDLAHFELENGKT-LPGLAPVALQQGRAI------- 324
Query: 259 GKAGGGRANSAKDM--ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
GR N D+ + PF YR G MATIG+ KA+V++ L G L+W
Sbjct: 325 -----GR-NILLDLKKKARKPFRYRDKGQMATIGKNKAIVEI------GSLKFDGILAWF 372
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWA---TTFVFG 346
W ++ + S+R+R +V + W TF +G
Sbjct: 373 TWLLVHIYFLTSFRHRVFVLLQWGWSYFTFSYG 405
>gi|46447443|ref|YP_008808.1| NADH2 dehydrogenase [Candidatus Protochlamydia amoebophila UWE25]
gi|46401084|emb|CAF24533.1| putative NADH2 dehydrogenase [Candidatus Protochlamydia amoebophila
UWE25]
Length = 414
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 164/332 (49%), Gaps = 23/332 (6%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A GA + FG + A L+ V A IR K+L+ ++ E +S L
Sbjct: 96 YDDLILAPGARHTYFGHDNWEHFAPGLKTVADAFRIREKMLMAFEKAERCENREAVQSSL 155
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFDDRLRH 141
V++G GPTGVE +G +++F R + + + + + LIE +IL SF L +
Sbjct: 156 -SFVIIGAGPTGVEMAGSMAEFAHRTLFKNFRSINPANSKIYLIEEGQQILPSFPGELAN 214
Query: 142 YATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 200
A L + GV L+ V V Q + +N+ +P +VW+ G S LVKSL +
Sbjct: 215 RALEDLKQLGVEVLLNTFVTQVTDQGVYMNEKF-LPAFTVVWAAGNEASPLVKSLGVSLD 273
Query: 201 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260
R+ + L +P +VF +GD + + S + LP +A VA +QG Y+ +L+ +
Sbjct: 274 KQSRVKVQPDLTIPGFTNVFVIGDAAAVVSSKNE-FLPGIAPVAIQQGHYVANLIKKNIL 332
Query: 261 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 320
+ PF+Y G +ATIGR +A+ L K +GFL+WL+W
Sbjct: 333 PSNRK-----------PFLYWDKGMIATIGRGRAVAILGNFK------FSGFLAWLIWCF 375
Query: 321 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++ +VS+ +R V + W ++F R +R+
Sbjct: 376 IHILYLVSFGHRLLVMIQWIFLYLFNRRQARV 407
>gi|152999668|ref|YP_001365349.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS185]
gi|151364286|gb|ABS07286.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Shewanella baltica OS185]
Length = 429
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 160/322 (49%), Gaps = 25/322 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ALG +++F G E+ FL + +A KLL L+ E
Sbjct: 110 QIDYDFLVLALGGVSNSFNTLGADEHCIFLDSLENANLFHHKLLDALL-------QLNET 162
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDR 138
+ +VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +R
Sbjct: 163 QERVSIGIVGAGATGVELAAELHHVIESVKEYGYLNIAKHHLDVHLIEASPKILPQLPER 222
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLD 196
+ A L K G+RL G+ VK+V I DG + GL VW+ GV GP
Sbjct: 223 VSARAQAVLDKIGIRLHIGVQVKEVTRDGFITQDGDVIKAGLKVWAAGVKGPKAFQNFTK 282
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLL 255
LP +P ++ +D+ +RV QD++A+GDC+ ++S+G+ V P AQ A + LF +++
Sbjct: 283 LPITPRNQVEVDDCMRVKGHQDIYALGDCALLIQSSGQPV-PPRAQAAAQMADTLFDNIV 341
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
NR+ G+ A F+Y+ GS+ ++ R+ A+ +L N S + G ++
Sbjct: 342 NRL----QGKPEKA--------FIYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIAR 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAV 337
L++ S Y + S F V
Sbjct: 390 LMYISLYQRHLASLYGWFSAIV 411
>gi|374375800|ref|ZP_09633458.1| NADH dehydrogenase (ubiquinone) [Niabella soli DSM 19437]
gi|373232640|gb|EHP52435.1| NADH dehydrogenase (ubiquinone) [Niabella soli DSM 19437]
Length = 431
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 168/336 (50%), Gaps = 39/336 (11%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LV+A GA ++ FG+ V+++A ++ + A +R LL L + I + ++
Sbjct: 97 ELAYDYLVLATGAASNFFGLENVEQHAIPMKTLSDALYMRNTLLDRL--EEATRIQDLDR 154
Query: 81 SRLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANE-ILSSFD 136
+ L +VV G GPTGVE SG ++ ++ V++ Y + + + L++ + +L
Sbjct: 155 IKKLATIVVAGAGPTGVELSGMFAEMRIKIVQKDYPELAGRQVGKIYLVDGGKAVLGPMS 214
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
++ +HY+ L K GV + G VKD + L+DGT + L+W+ GV T
Sbjct: 215 EQSQHYSKESLEKLGVIIKLGTTVKDFKDDTVFLSDGTTIATTTLIWAAGVTAQTFE--- 271
Query: 196 DLPKSPGGR---IGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 251
+P GR + +D + ++ +++A+GD C + P LAQVA +Q K
Sbjct: 272 GIPTEAYGRARRMLVDAFNKINGFSNIYALGDTCIQTTDPAFPNGHPQLAQVAIQQAK-- 329
Query: 252 FSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
N K++ L + PF+Y GSMA IGR KA+ DL + K L
Sbjct: 330 ---------------NLGKNLLLPEGSRKPFIYNDKGSMAIIGRNKAVADLEKPK----L 370
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
GF++WL+W ++ ++++RNR NW +
Sbjct: 371 HFNGFIAWLIWLFIHVMSLLNFRNRLRTLYNWVGAY 406
>gi|444308702|ref|ZP_21144345.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum intermedium M86]
gi|443487901|gb|ELT50660.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum intermedium M86]
Length = 459
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD L++A GA S FG + A L+ + A IRR++L ++ E +
Sbjct: 121 RLAYDILILATGARHSYFGHDEWEPFAPGLKSLEDATTIRRRVLAAFERAE----REPDP 176
Query: 81 SR---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSF 135
+R L V++GGGPTGVE +G +++ +++ + + V L+EA + +L F
Sbjct: 177 ARRAALQTFVIIGGGPTGVELAGTIAELAHLTLKRDFRSIDPSATRVVLMEAGQRLLPVF 236
Query: 136 DDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 195
++L Y L K GV + G S ++ +G ++ ++W+ GV S + L
Sbjct: 237 PEKLSEYTRKSLEKLGVEVKLGKPVTACSADGVIVNGEDIAATTILWAAGVQASPAARWL 296
Query: 196 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 255
+ GR+ + + VP D+F +GD + GK V P LA A++QG+Y+ L+
Sbjct: 297 NAEADRAGRVIVGPDMTVPGHSDIFVIGDTAASTGGDGKPV-PGLAPAAKQQGQYVARLI 355
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
G R D + PF YRH G++ATIG A+VD+ + K L G +W
Sbjct: 356 -------GQRMKGLNDEK---PFHYRHQGNLATIGSRLAVVDMGRFK------LRGAPAW 399
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+W+ ++ ++ +NR VA++W T G SR+
Sbjct: 400 WMWKLIHIYFLIGAQNRLSVALSWMWTHSIGYRGSRL 436
>gi|229493549|ref|ZP_04387334.1| NADH dehydrogenase [Rhodococcus erythropolis SK121]
gi|453070525|ref|ZP_21973766.1| NADH dehydrogenase [Rhodococcus qingshengii BKS 20-40]
gi|229319510|gb|EEN85346.1| NADH dehydrogenase [Rhodococcus erythropolis SK121]
gi|452761039|gb|EME19356.1| NADH dehydrogenase [Rhodococcus qingshengii BKS 20-40]
Length = 471
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 173/339 (51%), Gaps = 41/339 (12%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISEEEK 80
+D L++A GA S FG E A ++ + A E+R ++L LSD P E+
Sbjct: 108 FDSLIVAAGAGQSYFGNDQFAEFAPGMKTIDDALELRGRILGAFEQAELSDDPA----ER 163
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDR 138
+RLL VVVG GPTGVE +G++++ R + + + ++ V L A +L + +
Sbjct: 164 ARLLTFVVVGAGPTGVELAGQIAELSRRTLDGAFRKIDPREARVVLLDGAPAVLPVYGGK 223
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVK 193
L A L K GV + + +V DVD+ LI+ DGT + VWS GV S L K
Sbjct: 224 LSRKAAETLEKLGVEIQLDAMVTDVDNDGLIIKEKDGTLRRIESQCKVWSAGVQASPLGK 283
Query: 194 SLDLPKSPG-----GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
L +S G GR+ ++ L +P +VF +GD + S K LP LAQVA + G
Sbjct: 284 QL-AEQSGGETDRAGRVMVNPDLSLPGHPNVFVIGD----MMSLDK--LPGLAQVAMQGG 336
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
KY +I + G++ S + PF Y GSMATI R+ A+ + + L
Sbjct: 337 KYA---AKQIKASLDGKSPSERV-----PFKYFDKGSMATISRFSAVAKVGK------LE 382
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
++GF+ W+ W + +L +V +R+R ++WA TF FGR
Sbjct: 383 ISGFIGWVAWLAIHLLYLVGFRSRASTLLSWAVTF-FGR 420
>gi|89053357|ref|YP_508808.1| cyclic nucleotide-regulated FAD-dependent pyridine
nucleotide-disulfide oxidoreductase [Jannaschia sp.
CCS1]
gi|88862906|gb|ABD53783.1| cyclic nucleotide-regulated FAD-dependent pyridine
nucleotide-disulfide oxidoreductase [Jannaschia sp.
CCS1]
Length = 546
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 171/336 (50%), Gaps = 27/336 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+ALG G++ +A ++ + A+ +R ++ L +D+ + E ++
Sbjct: 100 EVPYDHLVVALGQTVDLSRTPGLEAHALTMKTLEDARRLRAHVIERLEHADITNLPEVKR 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRL 139
L V+GGG +G+E GE+++ I R ++ + +D + + ++E A+++L+ ++L
Sbjct: 160 GALTFT-VIGGGFSGIETVGEMAELIDRSLKYYPNVSRDEVRIIVLEFADKVLAEMPEKL 218
Query: 140 RHYATTQLSKSGVR--LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
R YA QL K GV L GI +Q + DG + +V + G P+ +VK +DL
Sbjct: 219 RAYAQAQLEKRGVEVCLNTGIASATGTQ-ITTTDGDVIDTRTVVATIGNAPAPVVKRMDL 277
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCS--GYLESTG--KTVLPALAQVAERQGKYLFS 253
P + GRI ++ L VP V+++GDC+ +E + P AQ A R+ K L +
Sbjct: 278 PLT-QGRIAVERDLSVPGRDGVWSLGDCALIPMVEDANAREDYAPPTAQFAVREAKQLAA 336
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
+ R A D PF Y GSMA++G + + D+ G+ L GFL
Sbjct: 337 NIKR-----------AVDGTALKPFEYTSKGSMASLGARRGIADV------MGIRLTGFL 379
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 349
+W++WR+ Y+ + + + +V +W +V R +
Sbjct: 380 AWVLWRAYYVAFLPGFPAKVWVLSHWVLDWVTPRSL 415
>gi|119774073|ref|YP_926813.1| NADH dehydrogenase [Shewanella amazonensis SB2B]
gi|119766573|gb|ABL99143.1| NADH dehydrogenase [Shewanella amazonensis SB2B]
Length = 429
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 30/317 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LV+ALG +++F G + + FL + +A++ R+LL LML D E +S
Sbjct: 111 IEYDYLVLALGGVSNSFNTPGAESHCIFLDNLQNAEQFHRQLLDGLMLLD------ETQS 164
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQ-RYSHV-KDYIHVTLIEAN-EILSSFDDR 138
RL +VG G TGVE + EL ++ VR+ Y ++ K ++ + LIEA +IL DR
Sbjct: 165 RL-SIGIVGAGATGVELAAELH-HVVESVREFGYQNISKQHLDIHLIEAAPKILPQLPDR 222
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLD 196
+ A L K G+ L G+ VK+V + DG + + VW+ GV GP+
Sbjct: 223 VSGRAQAVLDKIGIHLHLGVQVKEVTKEGFTTQDGNLIRADIRVWAAGVKGPNVFSDLSK 282
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLL 255
LP +P ++ +D +RV D++A+GDC+ + + GK V P AQ A + + L+ ++L
Sbjct: 283 LPITPRNQVEVDACMRVKGHTDIYALGDCAQLILADGKPV-PPRAQAASQMAETLYHNIL 341
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
NR+ G+A + PF YR GS+ ++ R+ A+ +L N + G ++
Sbjct: 342 NRL----AGQAEA--------PFEYRDYGSLVSLSRFSAVGNLMGNLRRGDFFIEGHVAR 389
Query: 316 LVWRSAY---LTRVVSW 329
++ S Y L+ + W
Sbjct: 390 FMYLSLYHRHLSSLFGW 406
>gi|226185715|dbj|BAH33819.1| probable NADH dehydrogenase [Rhodococcus erythropolis PR4]
Length = 471
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 173/339 (51%), Gaps = 41/339 (12%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISEEEK 80
+D L++A GA S FG E A ++ + A E+R ++L LSD P E+
Sbjct: 108 FDSLIVAAGAGQSYFGNDQFAEFAPGMKTIDDALELRGRILGAFEQAELSDDPA----ER 163
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDR 138
+RLL VVVG GPTGVE +G++++ R + + + ++ V L A +L + +
Sbjct: 164 ARLLTFVVVGAGPTGVELAGQIAELSRRTLDGAFRKIDPREARVVLLDGAPAVLPVYGGK 223
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL--NDGT--EVPYGLLVWSTGVGPSTLVK 193
L A L K GV + + +V DVD+ LI+ DGT + VWS GV S L K
Sbjct: 224 LSRKAAETLEKLGVEIQLDAMVTDVDNDGLIIREKDGTLRRIESQCKVWSAGVQASPLGK 283
Query: 194 SLDLPKSPG-----GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
L +S G GR+ ++ L +P +VF +GD + S K LP LAQVA + G
Sbjct: 284 QL-AEQSGGETDRAGRVMVNPDLSLPGHPNVFVIGD----MMSLDK--LPGLAQVAMQGG 336
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
KY +I + G++ S + PF Y GSMATI R+ A+ + + L
Sbjct: 337 KYA---AKQIKASLDGKSPSERV-----PFKYFDKGSMATISRFSAVAKVGK------LE 382
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
++GF+ W+ W + +L +V +R+R ++WA TF FGR
Sbjct: 383 ISGFIGWVAWLAIHLLYLVGFRSRASTLLSWAVTF-FGR 420
>gi|319949031|ref|ZP_08023128.1| NADH dehydrogenase [Dietzia cinnamea P4]
gi|319437319|gb|EFV92342.1| NADH dehydrogenase [Dietzia cinnamea P4]
Length = 474
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 166/331 (50%), Gaps = 31/331 (9%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F + YD L++A GA S FG + A ++ V A E+R ++L ++V EEE
Sbjct: 112 FDLEYDSLIVAAGANQSYFGNDHFERWAPGMKTVDDALELRSRILGCFEQAEVID-DEEE 170
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDD 137
+ RLL V+VG GPTGVE +G++++ +R + + V L++A +L F +
Sbjct: 171 RRRLLTFVIVGAGPTGVEMAGQVAELAQHTLRNSFRRIDPASARVILLDAAPAVLPPFGN 230
Query: 138 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLV 192
L + A +L K GV + + +V +VD Q + + D + +WS GV S L
Sbjct: 231 NLGNAARARLEKMGVEIQLNAMVTNVDYQGIEVKDPDGSVRRIDASCKIWSAGVKASPLG 290
Query: 193 KSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
K L D GR+ +++ L +P ++F VGD L++ LP +AQVA + G
Sbjct: 291 KQLADQTDAEIDRAGRVLVNKDLSLPGHPEIFVVGDMMS-LDN-----LPGVAQVAIQGG 344
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
KY + I + GR + + PF Y GSMAT+ RY A+V + +
Sbjct: 345 KYAAKQI--IAEVEKGRTPAER-----KPFKYFDKGSMATVSRYSAVVKM------GPIE 391
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
++GF++W++W +L ++ ++NR +W
Sbjct: 392 ISGFIAWVMWLVVHLAYLIGFKNRITTMFSW 422
>gi|338529980|ref|YP_004663314.1| putative NADH dehydrogenase [Myxococcus fulvus HW-1]
gi|337256076|gb|AEI62236.1| putative NADH dehydrogenase [Myxococcus fulvus HW-1]
Length = 424
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 170/333 (51%), Gaps = 27/333 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LVIA GA S FG ++A L+ + A EIRR++L+ L++ E +
Sbjct: 63 ELKYDFLVIATGATHSYFGNDAWAQHAPGLKSIEDAVEIRRRILVAFELAEREPDPEVRR 122
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDDR 138
+ LL+ +++G GPTGVE +G L++ + + ++ + LIE + +L + D
Sbjct: 123 A-LLNFIIIGAGPTGVELAGSLAEISRHSLPGDFRNIDPREARIILIEGIDRVLPVYPDD 181
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVKSLD 196
L A L K GV + G V ++ Q + + GTE +P ++W+ GV S + +SL
Sbjct: 182 LSQKACRTLEKLGVEVRTGARVTHINEQGIFI--GTEFIPARTVLWAAGVAASPVARSLG 239
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP DVF VGD + ++ GK V P LA A ++GK+ +
Sbjct: 240 AQLDRAGRVLVTPELTVPGHDDVFVVGDLASLNDADGKPV-PGLAPAAMQEGKHAAHNIR 298
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL-VDLRQNKESKGLSLAGFLSW 315
R K ME F Y GS A IGR A+ + R+ K+S GF +W
Sbjct: 299 --------RQLQGKPMEA---FSYWDRGSYAVIGRGHAVGIAFRRFKQS------GFSAW 341
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGR 347
+ W ++T ++ +R+R V ++WA +++ FG+
Sbjct: 342 MAWLLIHITFLIGFRSRLAVLLDWAYSYLTFGK 374
>gi|225686280|ref|YP_002734252.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Brucella melitensis ATCC 23457]
gi|256262582|ref|ZP_05465114.1| NADH dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|260564584|ref|ZP_05835069.1| NADH dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|265989799|ref|ZP_06102356.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 1 str. Rev.1]
gi|265993092|ref|ZP_06105649.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 3 str. Ether]
gi|384446619|ref|YP_005660837.1| NADH dehydrogenase [Brucella melitensis NI]
gi|225642385|gb|ACO02298.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis ATCC 23457]
gi|260152227|gb|EEW87320.1| NADH dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|262763962|gb|EEZ09994.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 3 str. Ether]
gi|263000468|gb|EEZ13158.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 1 str. Rev.1]
gi|263092367|gb|EEZ16620.1| NADH dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|349744616|gb|AEQ10158.1| NADH dehydrogenase [Brucella melitensis NI]
Length = 424
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 175/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 98 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 157
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+E ILS+F +
Sbjct: 158 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEVGPRILSAFPE 215
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|198283640|ref|YP_002219961.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666378|ref|YP_002426269.1| pyridine nucleotide-disulfide oxidoreductase [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248161|gb|ACH83754.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518591|gb|ACK79177.1| pyridine nucleotide-disulfide oxidoreductase [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 418
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 21/326 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+SYD L IALG + FG + +A ++ + A+ +R + L + ++
Sbjct: 93 LSYDYLFIALGTVTNFFGNAAIANHALQIKGMEAAEAVRSHIFSALEAASH-CTDPAQQQ 151
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFDDRL 139
R L V+ GGGPTGVEF L + + + + Y ++ + + VTL++ + +L F L
Sbjct: 152 RWLSFVIAGGGPTGVEFCAALLELLRVVLPRDYPELRLEDLQVTLVQGSAALLPGFSAPL 211
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
+ A +L K G +L V+ D Q + +P LVW+ GV + L ++
Sbjct: 212 QGQAARKLQKLGAQLRFHTHVQGFDGQMVQCQPDPAIPARTLVWTAGVTANPLAATMPGA 271
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
+ PGGRI +D LR+P +VF +GD + S+ P +A A + +++ +L
Sbjct: 272 RGPGGRIIVDPHLRLPEYPEVFILGDLAC---SSNGEFWPQVAPFALQSARHVALVLQ-- 326
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
+ + L PF YR GSMA IGR+ A+ ++ E L G+ +WL+W
Sbjct: 327 --------SQRQGRPLPPPFAYRDPGSMAVIGRFDAVCEI----ERWHLHWHGWSAWLLW 374
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFV 344
+L ++ RNR ++W T ++
Sbjct: 375 LGLHLYHIIGTRNRLLTLLDWGTDYL 400
>gi|158316665|ref|YP_001509173.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Frankia
sp. EAN1pec]
gi|158112070|gb|ABW14267.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Frankia sp. EAN1pec]
Length = 504
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 167/333 (50%), Gaps = 36/333 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A GA S FG E+A ++ + A E+R ++ +++ + +R
Sbjct: 108 YDSLIVAAGAGQSYFGNDHFAEHAPGMKSIDDALELRGRIFGAFEVAETT-PDPADAARY 166
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI---EANEILSSFDDRLR 140
+ VVVG GPTGVE +G++++ R +RQ + + D +I A +L +F ++L
Sbjct: 167 MTFVVVGAGPTGVEMAGQIAELSHRTLRQDFRRI-DTTKARIILLDAAPSVLGTFGEKLA 225
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLIL--NDGTE--VPYGLLVWSTGVGPSTLVKSL 195
AT++L K GV + G V +VDS+ + + +DGT + +W+ GV S L K L
Sbjct: 226 AKATSKLEKLGVEIQLGARVVNVDSRGIDVEDSDGTRRRIESVCKIWAAGVAASPLGKQL 285
Query: 196 DLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
GRI + L +P +VF VGD + LP +AQVA + GKY
Sbjct: 286 AEQSGAVLDRAGRIQVQPDLTLPGHPEVFVVGDMATLDR------LPGVAQVAIQGGKYA 339
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311
++ + G N F Y+ GSMATI R+ A+ + KG+ L+G
Sbjct: 340 AKTISTRLRGGPPMRN----------FEYKDKGSMATISRFSAVASI------KGVQLSG 383
Query: 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
F++WL+W + +L ++ +++R ++W +F+
Sbjct: 384 FVAWLMWLAVHLVYIIGFKHRVTTLLHWTVSFI 416
>gi|288923057|ref|ZP_06417210.1| NADH dehydrogenase (ubiquinone) [Frankia sp. EUN1f]
gi|288345607|gb|EFC79983.1| NADH dehydrogenase (ubiquinone) [Frankia sp. EUN1f]
Length = 503
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 164/336 (48%), Gaps = 42/336 (12%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A GA S FG E+A ++ + A E+R ++ +++ + E+ +R
Sbjct: 113 YDSLIVAAGAGQSYFGNDHFAEHAPGMKSIDDALELRGRIFGAFEVAET-APNPEDVARY 171
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI---EANEILSSFDDRLR 140
+ VVVG GPTGVE +G++++ R +R + + D +I A +L +F ++L
Sbjct: 172 MTFVVVGAGPTGVEMAGQIAEMAHRTLRHDFRRI-DTTKARIILLDAAPTVLGTFGEKLA 230
Query: 141 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTLVKSL 195
AT +L K GV + G V +VDS+ + + D + +W+ GV S L K L
Sbjct: 231 AKATAKLEKIGVEIQLGARVINVDSRGIDVEDSDGNRRRIESVCKIWAAGVAASPLGKQL 290
Query: 196 DLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
GRI + L +P +VF VGD + LP +AQVA + G+Y
Sbjct: 291 AEQSGAVLDRAGRIQVQPDLTLPGHPEVFVVGDMAALDR------LPGVAQVAIQGGQYA 344
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLS 308
+ A + G P F Y+ GSMATI R+ A+ + KG+
Sbjct: 345 AKTI-------------ATRLRSGPPMRNFEYKDKGSMATISRFSAVASI------KGVQ 385
Query: 309 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
L+GFL+WL+W + +L ++ +++R ++W +F+
Sbjct: 386 LSGFLAWLMWLAVHLVYIIGFKHRVTTLLHWTVSFI 421
>gi|221484413|gb|EEE22709.1| pyridine nucleotide-disulphide oxidoreductase, putative [Toxoplasma
gondii GT1]
gi|221505613|gb|EEE31258.1| mitochondrial alternative NADH dehydrogenase 2 [Toxoplasma gondii
VEG]
Length = 657
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 196/408 (48%), Gaps = 81/408 (19%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
FK+ YD LVIA+G+E++TFGI V NA FL+EV HA IR+K++ N L+ +P SE+E
Sbjct: 248 FKVKYDYLVIAVGSESNTFGIKDVAANAFFLKEVEHAMAIRKKVMNNFELAALPQTSEKE 307
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ RLLH VVVGGGPTGVE + E +DFI D+ + + + ++ ++LIE + +L ++
Sbjct: 308 RDRLLHFVVVGGGPTGVESAAEFADFIKEDMSKYFPQLIPHVSISLIEGGSRLLGTYPPD 367
Query: 139 LRHYATTQLSKS-GVR-LVRGIVKDVD--SQKLILN------DGTEVPYGLLVWSTGVGP 188
+ +A L++ V+ L+R V VD S + + N + E+ +G ++W++GVG
Sbjct: 368 ISAFAEKTLTEELHVKLLLRSTVVGVDATSVRYVSNEPGASKEPKELLHGFVLWASGVGE 427
Query: 189 STLVKSL---DLPKSPGGR----IGIDEWLRVPSVQDVFAVGDC---------------- 225
LVK + + P G + +D LR+ + +V+A+GDC
Sbjct: 428 VPLVKKIIAENFPNVEGKPRLRGLPVDAQLRLLNQPNVYALGDCAAIAPPRLADAAQELF 487
Query: 226 --SGYLESTGKTV---LPALAQVAERQGKYLF-----------------SLLNRIGKAGG 263
+G E T + + P LAQ + F S L I A
Sbjct: 488 SKAGAAEPTPQWLGRHAPTLAQQFPQLSPLKFNFAKLQSNEHLPADQFKSFLAEIDAAYR 547
Query: 264 GRANSAKDM------------------ELGDPFVYRHL--GSMATIGRYKALVDLRQNKE 303
A +A++ E D ++ GS+A +G +A+ L
Sbjct: 548 PPAPTAQNARQEGIYLAKVFNECPHPEEKADAPAFQETWNGSLAYVGSGQAVAHLPYFN- 606
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KG GFLS W++ Y ++WR+R +W TF GRD+ R
Sbjct: 607 IKG----GFLSLPFWKAVYTQMQITWRSRTICLFDWLKTFFAGRDVGR 650
>gi|78057337|gb|ABB17192.1| mitochondrial alternative NADH dehydrogenase 2 precursor
[Toxoplasma gondii]
Length = 657
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 196/408 (48%), Gaps = 81/408 (19%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
FK+ YD LVIA+G+E++TFGI V NA FL+EV HA IR+K++ N L+ +P SE+E
Sbjct: 248 FKVKYDYLVIAVGSESNTFGIKDVAANAFFLKEVEHAMAIRKKVMNNFELAALPQTSEKE 307
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ RLLH VVVGGGPTGVE + E +DFI D+ + + + ++ ++LIE + +L ++
Sbjct: 308 RDRLLHFVVVGGGPTGVESAAEFADFIKEDMSKYFPQLIPHVSISLIEGGSRLLGTYPPD 367
Query: 139 LRHYATTQLSKS-GVR-LVRGIVKDVD--SQKLILN------DGTEVPYGLLVWSTGVGP 188
+ +A L++ V+ L+R V VD S + + N + E+ +G ++W++GVG
Sbjct: 368 ISAFAEKTLTEELHVKLLLRSTVVGVDATSVRYVSNEPGASKEPKELLHGFVLWASGVGE 427
Query: 189 STLVKSL---DLPKSPGGR----IGIDEWLRVPSVQDVFAVGDC---------------- 225
LVK + + P G + +D LR+ + +V+A+GDC
Sbjct: 428 VPLVKKIIAENFPNVEGKPRLRGLPVDAQLRLLNQPNVYALGDCAAIAPPRLADAAQELF 487
Query: 226 --SGYLESTGKTV---LPALAQVAERQGKYLF-----------------SLLNRIGKAGG 263
+G E T + + P LAQ + F S L I A
Sbjct: 488 SKAGAAEPTPQWLGRHAPTLAQQFPQLSPLKFNFAKLQSNEHLPADQFESFLAEIDAAYR 547
Query: 264 GRANSAKDM------------------ELGDPFVYRHL--GSMATIGRYKALVDLRQNKE 303
A +A++ E D ++ GS+A +G +A+ L
Sbjct: 548 PPAPTAQNARQEGIYLAKVFNECPHPEEKADAPAFQETWNGSLAYVGSGQAVAHLPYFN- 606
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KG GFLS W++ Y ++WR+R +W TF GRD+ R
Sbjct: 607 IKG----GFLSLPFWKAVYTQMQITWRSRTICLFDWLKTFFAGRDVGR 650
>gi|237838043|ref|XP_002368319.1| pyridine nucleotide-disulphide oxidoreductase, putative [Toxoplasma
gondii ME49]
gi|211965983|gb|EEB01179.1| pyridine nucleotide-disulphide oxidoreductase, putative [Toxoplasma
gondii ME49]
Length = 657
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 196/408 (48%), Gaps = 81/408 (19%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
FK+ YD LVIA+G+E++TFGI V NA FL+EV HA IR+K++ N L+ +P SE+E
Sbjct: 248 FKVKYDYLVIAVGSESNTFGIKDVAANAFFLKEVEHAMAIRKKVMNNFELAALPQTSEKE 307
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 138
+ RLLH VVVGGGPTGVE + E +DFI D+ + + + ++ ++LIE + +L ++
Sbjct: 308 RDRLLHFVVVGGGPTGVESAAEFADFIKEDMSKYFPQLIPHVSISLIEGGSRLLGTYPPD 367
Query: 139 LRHYATTQLSKS-GVR-LVRGIVKDVD--SQKLILN------DGTEVPYGLLVWSTGVGP 188
+ +A L++ V+ L+R V VD S + + N + E+ +G ++W++GVG
Sbjct: 368 ISAFAEKTLTEELHVKLLLRSTVVGVDATSVRYVSNEPGASKEPKELLHGFVLWASGVGE 427
Query: 189 STLVKSL---DLPKSPGGR----IGIDEWLRVPSVQDVFAVGDC---------------- 225
LVK + + P G + +D LR+ + +V+A+GDC
Sbjct: 428 VPLVKKIIAENFPNVEGKPRLRGLPVDAQLRLLNQPNVYALGDCAAIAPPRLADAAQELF 487
Query: 226 --SGYLESTGKTV---LPALAQVAERQGKYLF-----------------SLLNRIGKAGG 263
+G E T + + P LAQ + F S L I A
Sbjct: 488 SKAGAAEPTPQWLGRHAPTLAQQFPQLSPLKFNFAKLQSNEHLPADQFKSFLAEIDAAYR 547
Query: 264 GRANSAKDM------------------ELGDPFVYRHL--GSMATIGRYKALVDLRQNKE 303
A +A++ E D ++ GS+A +G +A+ L
Sbjct: 548 PPAPTAQNARQEGIYLAKVFNECPHPEEKADAPAFQETWNGSLAYVGSGQAVAHLPYFN- 606
Query: 304 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351
KG GFLS W++ Y ++WR+R +W TF GRD+ R
Sbjct: 607 IKG----GFLSLPFWKAVYTQMQITWRSRTICLFDWLKTFFAGRDVGR 650
>gi|313676638|ref|YP_004054634.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase
[Marivirga tractuosa DSM 4126]
gi|312943336|gb|ADR22526.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Marivirga tractuosa DSM 4126]
Length = 437
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 21/322 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++S+D L+IA G++ + FG + E A L+++ A + R +L N + V EE+
Sbjct: 105 ELSFDYLIIAAGSKTNFFGQNEKFEKAFPLKQIPQALDFRSHILQNFEEA-VLSSDEEKI 163
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDR 138
RL++ V+VGGGPTGVE +G L + + Y + + +++ L+E + +L +
Sbjct: 164 ERLMNIVIVGGGPTGVELAGALGELKKHVLPNDYPDLDFNRLNIYLVEGMDRLLGGMSEF 223
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
A L K V + + +V D +K++ N+ +P L+W GV +++ L
Sbjct: 224 ADKKAQKYLKKFEVNVKLNTMVDSYDGEKVVFNNNETIPAATLLWGAGVM-GNVIEGLSE 282
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
R +D + V +++AVGD + P LA VA +QG+ L N
Sbjct: 283 QSVKNSRYKVDRYNLVEGTDNIYAVGDIALMETEDFPKGHPMLAPVAMQQGERLSK--NI 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ G PF Y GSMAT+GR KA+VDL +N L GF +W +
Sbjct: 341 LASLKGKEQK---------PFKYLDKGSMATVGRNKAVVDLPKN-----LHFGGFFAWFI 386
Query: 318 WRSAYLTRVVSWRNRFYVAVNW 339
W +L +V +RN+ + NW
Sbjct: 387 WMFVHLISIVGFRNKIVILSNW 408
>gi|380483102|emb|CCF40825.1| hypothetical protein CH063_11291 [Colletotrichum higginsianum]
Length = 693
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 141/248 (56%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL+++ A+++R +++ NL + +P +++
Sbjct: 265 RFYVPYDKLVIAVGSTTNPHGVKGL-ENAHFLKDISDARKVRNQVMHNLEQACLPTTADD 323
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ Q + +++ I V LI++ + IL+++D
Sbjct: 324 ERKRLLSFVVSGGGPTGVEFAAELFDMLNEDLTQHFPKLLRNEISVHLIQSRSHILNTYD 383
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 187
+ + YA ++ V L VK+V K++ DG+ E+P G +WSTGV
Sbjct: 384 EAVSKYAEEHFARDQVDILTNSRVKEVLPDKIVFTQKQPDGSLVTKELPMGFCLWSTGVA 443
Query: 188 PSTLVKSLDLPKSPGGR----IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ L K L P + D LR+ + DV+A+GDCS + ++ L
Sbjct: 444 QADLCKRLSAKLGPSQTNRHALETDTHLRLNGTPLGDVYAIGDCSTVQNNVADHIITFLR 503
Query: 242 QVAERQGK 249
+A ++GK
Sbjct: 504 GIAFKRGK 511
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGG-RANSAKDMELGD----PFVYRHLGSMATI 289
T LPA AQ A +QG+YL N++ + G +AN D ++ FVYRHLGS+A I
Sbjct: 576 TSLPATAQRAHQQGQYLAHKFNKLARTSDGLKANMVLDGDIDSVVYKAFVYRHLGSLAYI 635
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ D +G + AG L W V WRS Y + VS R R +A++WA +FGR
Sbjct: 636 GN-SAVFDW-----GEGWNFAGGL-WAVYMWRSVYFAQSVSLRTRILLAMDWAKRGLFGR 688
Query: 348 DI 349
D+
Sbjct: 689 DL 690
>gi|17989131|ref|NP_541764.1| NADH dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|17984981|gb|AAL54028.1| NADH dehydrogenase [Brucella melitensis bv. 1 str. 16M]
Length = 441
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 175/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 115 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 174
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+E ILS+F +
Sbjct: 175 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEVGPRILSAFPE 232
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
>gi|145295599|ref|YP_001138420.1| hypothetical protein cgR_1526 [Corynebacterium glutamicum R]
gi|417970784|ref|ZP_12611715.1| NADH dehydrogenase [Corynebacterium glutamicum S9114]
gi|140845519|dbj|BAF54518.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045080|gb|EGV40754.1| NADH dehydrogenase [Corynebacterium glutamicum S9114]
Length = 467
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 175/352 (49%), Gaps = 39/352 (11%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+ V +TVT +L + YD LV+ GA S FG E A ++ + A EIR
Sbjct: 90 INVESQTVT---ASLGEFTRVFEYDSLVVGAGAGQSYFGNDHFAEFAPGMKSIDDALEIR 146
Query: 61 RKLLLNLMLSDVPGISEE--EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 118
+++ ++ I E+ E+ RLL VVVG GPTGVE +G+L++ R + Y +
Sbjct: 147 ARIIGAFERAE---ICEDPAERERLLTFVVVGAGPTGVELAGQLAEMAHRTLAGEYKNFN 203
Query: 119 -DYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI--LNDGT 173
+ + L++ A ++L F RL A L K GV + + +V +VD+ + DG
Sbjct: 204 TNSAKIILLDGAPQVLPPFGKRLGRNAQRTLEKIGVTVRLNAMVTNVDATSVTYKTKDGE 263
Query: 174 E--VPYGLLVWSTGVGPSTLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 227
E + +WS GV S L K + GR+ +++ L V ++VF VGD
Sbjct: 264 EHTIESFCKIWSAGVAASPLGKLVAEQTGVETDRAGRVMVNDDLSVGDQKNVFVVGDMMN 323
Query: 228 YLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMA 287
Y LP +AQVA + G+Y + +I GR+N+ + + F Y GSMA
Sbjct: 324 Y------NNLPGVAQVAIQSGEY---VAEQIEAEVEGRSNTER-----EAFDYFDKGSMA 369
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
TI R+ A+V + + + + GF+ W++W + ++ +V +RNRF A++W
Sbjct: 370 TISRFSAVVKMGK------VEVTGFIGWVLWLAVHIMFLVGFRNRFVSAISW 415
>gi|108760597|ref|YP_629699.1| NADH dehydrogenase [Myxococcus xanthus DK 1622]
gi|108464477|gb|ABF89662.1| putative NADH dehydrogenase [Myxococcus xanthus DK 1622]
Length = 461
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 170/333 (51%), Gaps = 27/333 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LVIA GA S FG + A L+ + A IRR++L+ L++ E +
Sbjct: 100 ELNYDYLVIATGATHSYFGNDAWAQFAPGLKSIEDALAIRRRILVAFELAERETDPEIRR 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDDR 138
S LL+ V++G GPTGVE +G L++ + + + + LIE +++L + D
Sbjct: 160 S-LLNFVIIGAGPTGVELAGSLAEISRHSLHGDFRNFDPRDARIILIEGMDKVLPVYPDD 218
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVKSLD 196
L A L K GV + G V ++ Q + + G E +P ++W+ GV S + KSL
Sbjct: 219 LSQKACRTLEKLGVEVRTGARVTNITEQGVFI--GQEFIPARTVLWAAGVAASPVAKSLG 276
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
+ GR+ + L +P DVF VGD S ++ GK V P LA VA ++GK+ +
Sbjct: 277 VELDRSGRVLVTPELTIPGHDDVFVVGDLSLLKDAEGKPV-PGLAPVAMQEGKHAAHNIR 335
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL-VDLRQNKESKGLSLAGFLSW 315
R K M PF Y GS A IGR A+ + R+ K+ AGF +W
Sbjct: 336 --------RQLQGKPMV---PFSYWDRGSYAVIGRGHAVGIAFRRFKQ------AGFGAW 378
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGR 347
+ W ++T ++ +R+R V +NWA +++ FG+
Sbjct: 379 MAWLLIHITFLIGFRSRLAVLLNWAFSYLTFGK 411
>gi|384212993|ref|YP_005602076.1| NADH dehydrogenase [Brucella melitensis M5-90]
gi|384410094|ref|YP_005598714.1| NADH dehydrogenase [Brucella melitensis M28]
gi|326410641|gb|ADZ67705.1| NADH dehydrogenase [Brucella melitensis M28]
gi|326553933|gb|ADZ88572.1| NADH dehydrogenase [Brucella melitensis M5-90]
Length = 441
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 175/336 (52%), Gaps = 24/336 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD-VPGISEEE 79
++SYD LV+A GA + FG ++ A L+ + A IRR+LLL ++ P ++ +
Sbjct: 115 EVSYDMLVLATGARHAYFGNDQWEKLAPGLKALEDATTIRRRLLLAFERAEREPDMARRQ 174
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 137
LL +VGGGPTGVE +G +++ R + + ++ V L+E ILS+F +
Sbjct: 175 A--LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEVGPRILSAFPE 232
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
>gi|329954915|ref|ZP_08295932.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides clarus
YIT 12056]
gi|328527019|gb|EGF54030.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides clarus
YIT 12056]
Length = 428
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 167/344 (48%), Gaps = 23/344 (6%)
Query: 5 CET--VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
CE V E LE ++YD LVIA G + + FG + + + L+ A R +
Sbjct: 86 CEAQRVIPENDLLETSIGTLAYDYLVIATGCDTNYFGNNDMAKQTMALKNTSEALFNRNQ 145
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYI 121
+L + + G ++EE+ RL+ +VGGG TG+E +G L++ + Q Y + + +
Sbjct: 146 ILDSFEQAQNTG-NQEERKRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEM 204
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
+ LI+ A+ +LS+F ++ T L V + + V + + KL+L++G +
Sbjct: 205 RIILIDGASRLLSAFSEKSSQEVTDYLRSRDVEIKLNARVMNYEDNKLVLSEGPVIDTKN 264
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+ W GV ++L PG R+ +D + R+ D+FA+GD + P
Sbjct: 265 VFWVAGVKANSLQGLPAEAYGPGNRLKVDNYNRLYEYPDIFAIGDTALMTSDVFPKGHPQ 324
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
+ Q A +Q + L L RI + + L PFVY GSMATIGR A+V+L+
Sbjct: 325 VVQPAIQQARNLIINLQRIEQG----------LPL-QPFVYHSKGSMATIGRNHAVVELK 373
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ L GF +W VW +L +V +NR ++ V+W ++
Sbjct: 374 K------LRFGGFPAWAVWLFIHLMSIVGVKNRLFIFVDWMWSY 411
>gi|320162809|gb|EFW39708.1| mitochondrial NADH dehydrogenase [Capsaspora owczarzaki ATCC 30864]
Length = 672
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 138/239 (57%), Gaps = 22/239 (9%)
Query: 3 VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
V C+ D+L F++ YD+LV+A+GA +TF GV++N FL++V A++IR K
Sbjct: 175 VVCKDEHDQL-------FELPYDRLVVAVGAHNNTFNTPGVEKNCHFLKQVQDARDIRAK 227
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYI 121
++ N + +P +EK RLLH ++VGGGPTGVE + E++D + D+ + + + Y+
Sbjct: 228 IMDNFEQAALPTTPVDEKRRLLHFLIVGGGPTGVEVAAEIADLVRDDLVHLFPELCQKYV 287
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN---DGTEVP 176
V+L++ A+ IL+++D+ + YA + + ++ R V V+ + DG +VP
Sbjct: 288 SVSLVQSADHILNTYDESISLYAEKKFKMQNINVITRARVLQVNPTSVEYTERIDGKDVP 347
Query: 177 ----YGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGI--DEWLRVPSV-QDVFAVGDCS 226
YG+ VWSTG+ LV+++ L KS R + D LRV D+FA+GDC+
Sbjct: 348 KTLNYGMCVWSTGIKQVPLVETIATHLDKSQNHRRALVTDSRLRVIGAGGDMFAIGDCA 406
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 270 KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSW 329
KD E PF Y H+GS+A IG A +D G++ +G ++ +WR AYL+ V+
Sbjct: 598 KDFE---PFHYHHMGSLAYIGHEDAAIDF-----GGGITGSGTAAFFLWRGAYLSNSVTV 649
Query: 330 RNRFYVAVNWATTFVFGRDISRI 352
R R +A++W +FGRD SR
Sbjct: 650 RVRVAIALDWLKLALFGRDFSRF 672
>gi|260429585|ref|ZP_05783562.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Citreicella sp. SE45]
gi|260420208|gb|EEX13461.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Citreicella sp. SE45]
Length = 428
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 34/340 (10%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLML---SDVPGISEE 78
+ YD LV+A GA S FG + A L+ + A IRR++L SD P
Sbjct: 97 VEYDTLVLATGARHSYFGNDDWETAAPGLKTLEDATAIRRRVLSAFEAAERSDDP----R 152
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 136
E+ LL VVG GPTGVE G +++ + + + ++ V L+EA +L +F
Sbjct: 153 EREALLTFAVVGAGPTGVELVGIIAELAQTSLVREFRNIDTRQARVLLVEAGPRVLPAFP 212
Query: 137 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVKS 194
+ L YA L + GV + G V D + + L GTE +P +W+ GV S +
Sbjct: 213 ESLSDYAAGALKRLGVEVRTGTPVTHCDPEGITL--GTEHIPARTAIWAAGVKASRAAQW 270
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254
L + GR+ + E L + ++F +GD + + GK V P +A A++QG+++
Sbjct: 271 LGVAGDRAGRVPVTEDLTLEGHPEIFVIGDTAAATNADGKPV-PGIAPAAKQQGEFVARK 329
Query: 255 LN-RIG-KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
L R G + GR FVYRH GS+ATIGR A+ D + + L G
Sbjct: 330 LKARFGLRRDPGR------------FVYRHQGSLATIGRKAAVADFGR------IRLKGA 371
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L+W VW A++ ++ RNR VA++W + G+ +R+
Sbjct: 372 LAWWVWGIAHIYFLIGTRNRMAVALSWLWSHASGQKSARL 411
>gi|372266312|ref|ZP_09502360.1| respiratory NADH dehydrogenase 2; cupric reductase [Alteromonas sp.
S89]
Length = 444
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 168/335 (50%), Gaps = 18/335 (5%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K+ YD LVIALG++++ F GV+++ FL AQ+ +LL +L D ++
Sbjct: 116 KLDYDYLVIALGSQSNDFHTPGVRKHCQFLDSAAQAQKFHSRLLDQFLLLDSQVVAS--- 172
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDR 138
+ +VGGG TGVE + EL D + YS +K+ + VTLIEA +L + R
Sbjct: 173 ---VQIAIVGGGATGVELAAELVDSVQE--MGHYSRIKNGDLKVTLIEAGPHLLPALPPR 227
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL-D 196
L + + +L+K GVR++ V + S + DG E+P + VW+ GV ++ L D
Sbjct: 228 LGNSSEKELTKIGVRVLTSTQVAEATSSGFVTKDGEEIPAAMRVWAAGVKAPDFLQHLDD 287
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
L + +I + LR + +FA+GDC+G ++ G V P AQ A++ K L L
Sbjct: 288 LQLNRQNQIEVAATLRSVTDPAIFALGDCAGCVDGHGVKV-PPRAQSAQQMSKTLSENLI 346
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ +A ++ L PF+Y+ GS+ ++ ++ A+ +L L++ G L+ +
Sbjct: 347 RLVEADSSSDADGEEATL-QPFIYKDRGSLVSLSKFDAVGNLMGGLVKGSLTIEGRLAGV 405
Query: 317 VWRSAY---LTRVVSW-RNRFYVAVNWATTFVFGR 347
+RS Y L + W + + A FV R
Sbjct: 406 AYRSLYRMHLAAIHGWPKAMLLYVIGQANRFVSPR 440
>gi|444432800|ref|ZP_21227950.1| NADH dehydrogenase [Gordonia soli NBRC 108243]
gi|443886426|dbj|GAC69671.1| NADH dehydrogenase [Gordonia soli NBRC 108243]
Length = 491
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 165/336 (49%), Gaps = 36/336 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISEEEK 80
YD L+IA GA+ S FG E A ++ + HA E+R ++L LSD P EE+
Sbjct: 109 YDDLIIAAGADQSYFGNDHFAEYAPGMKTIDHALELRGRILGAFEQAELSDDP----EER 164
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDDR 138
+RLL VVVG GPTGVE +G++S+ + ++ + ++ V L++A +L F ++
Sbjct: 165 ARLLTFVVVGAGPTGVELAGQISEMSDKTLKGTFRNIDPTEARVILLDAAPAVLPPFGEK 224
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVK 193
L A +L GV + + +V DVD L++ DGT + VWS GV S L K
Sbjct: 225 LGTKAARRLESMGVEIQLNAMVVDVDYDGLVVKEKDGTTRRIESQCKVWSAGVQASPLGK 284
Query: 194 SL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L +L ++ GR+ + L +P +VF VGD + +P +AQ A +
Sbjct: 285 QLAEQSGVELDRA--GRVKVLPDLSIPGHPNVFVVGDMMAVDD------VPGVAQGAIQG 336
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
G+Y + + G + K PF Y GSMAT+ R+ A++ + K
Sbjct: 337 GRYAADAIK--AEIKGQTPDQRK------PFSYYDKGSMATVSRFSAVMQVPIPGTKKKF 388
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G+ +WL W + +L +V +RNR +NW F
Sbjct: 389 ETEGYFAWLGWLALHLVYLVGFRNRLNTLINWFFAF 424
>gi|424913112|ref|ZP_18336486.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392844269|gb|EJA96792.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae USDA 2370]
Length = 421
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 168/334 (50%), Gaps = 22/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I+YD LV+A GA + FG G + A L+ + A IRR+LLL +++ E ++
Sbjct: 96 IAYDTLVLATGARHAYFGQDGWERFAPGLKALEDATTIRRRLLLAFERAELE-TDPEARN 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
LL ++G GPTGVE +G +++ R + + + + + L+EA +L F D L
Sbjct: 155 ALLTFSIIGAGPTGVELAGIIAELAHRTLVEEFRSIDTAAARILLVEAGPRVLPVFPDSL 214
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
YA L+K GV + G V D + + D VP ++W+ GV S +
Sbjct: 215 SRYAEHSLAKMGVEVRTGRPVTACDENGITIGD-EFVPSRTIIWAAGVQASKAAVWVGTD 273
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
K GR + L V ++F +GD + ++++ +P +A A++QGKY+ ++
Sbjct: 274 KDRAGRAIVQSDLTVAQRPEIFIIGDTA-FVKTGEGNPVPGVAPAAKQQGKYVAKVI--- 329
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
RA ++ + F Y+HLG++ATIG A++D + L + G L+W +W
Sbjct: 330 ------RARLSRKPAPPN-FRYKHLGNLATIGPSSAVIDFGK------LQVKGALAWWIW 376
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
++ ++ R+R VA++W TFV G +R+
Sbjct: 377 GLVHIYFLIGTRSRMAVALSWLWTFVSGHRSARL 410
>gi|345879972|ref|ZP_08831531.1| hypothetical protein HMPREF9431_00195 [Prevotella oulorum F0390]
gi|343923910|gb|EGV34592.1| hypothetical protein HMPREF9431_00195 [Prevotella oulorum F0390]
Length = 432
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 164/327 (50%), Gaps = 22/327 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ Y+ LV+A GA + FG + N ++ V A +R +L L ++ + E +
Sbjct: 102 VHYNDLVLAAGATTNFFGNAHFEHNTLPMKTVDDAIHLRNTILERLEAAETED-NPERRQ 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDRL 139
L++ V+VGGGP+GVE +G L++ + + Y+ + +H+ LI A + +LS+ D
Sbjct: 161 ALMNIVIVGGGPSGVEIAGALAEMKRTILPRDYADLDASKMHIYLINAGDRLLSAMDKTS 220
Query: 140 RHYATTQLSKSGVRLVRGIVK-DVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
A L + GV ++ G + D + +L+L D + ++W +G+ +T+
Sbjct: 221 SAKAEKGLEELGVEIMSGCMALDYANGQLLLKDHASIASETVIWVSGIKANTIEGIPATS 280
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GGRI +D + RV + DV+A+GD C ++ P LAQVA +Q + L R
Sbjct: 281 IGRGGRIVVDRFNRVKGMTDVYAIGDQCLIEGDAAYPHGHPQLAQVAIQQAANVAHNLER 340
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
K M PF Y +LG MATIGR KA+V++ + L GF +WL+
Sbjct: 341 --------QQEGKPMR---PFNYNNLGVMATIGRKKAVVEIGK------LKFGGFFAWLL 383
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFV 344
W +L ++ RN+ V +NW +++
Sbjct: 384 WLVVHLRSILGVRNKTIVLLNWMWSYL 410
>gi|262202653|ref|YP_003273861.1| NADH dehydrogenase (ubiquinone) [Gordonia bronchialis DSM 43247]
gi|262086000|gb|ACY21968.1| NADH dehydrogenase (ubiquinone) [Gordonia bronchialis DSM 43247]
Length = 483
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 167/336 (49%), Gaps = 36/336 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISEEEK 80
YD L+IA GA+ S FG E A ++ + HA E+R ++L LSD P E+
Sbjct: 107 YDSLIIAAGADQSYFGNDHFAEYAPGMKTIDHALELRGRILGAFEQAELSDDPA----ER 162
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDDR 138
++LL VVVG GPTGVE +G++++ + ++ + ++ V L++A +L F ++
Sbjct: 163 AKLLTFVVVGAGPTGVELAGQIAEMSDKTLKGAFRNIDPTEARVILLDAAPAVLPPFGEK 222
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVK 193
L A +L K GV + + +V D+D L++ DGT + VWS GV S L K
Sbjct: 223 LGGKAARRLEKMGVEVQLNAMVVDLDYDGLVVKEKDGTTRRIESQCKVWSAGVQASPLGK 282
Query: 194 SL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L +L ++ GR+ + L +P DVF VGD + G +P +AQ A +
Sbjct: 283 QLAEQSGVELDRA--GRVKVQPDLSIPGHPDVFVVGDM---MAVDG---VPGVAQGAIQG 334
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
G+Y + K +S D + PF Y GSMATI R+ A++ + K
Sbjct: 335 GRYAADAIKAELKG-----HSPADRK---PFSYYDKGSMATISRFSAVMQVPIPGTKKKF 386
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G+ +WL W + +L +V +RNR VNW F
Sbjct: 387 ETEGYFAWLGWLALHLVYLVGFRNRLNTLVNWFFAF 422
>gi|322693942|gb|EFY85786.1| putative alternative NADH dehydrogenase [Metarhizium acridum CQMa
102]
Length = 688
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 145/248 (58%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ +NA FL+++ A++IR +++ NL ++ +P S+E
Sbjct: 263 RFYVPYDKLVIAVGSVTNPHGVKGL-DNAFFLKDIDDARKIRNQVIRNLEVACLPTTSDE 321
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ E+ D + D+ + + +++ I V LI++ + IL+++D
Sbjct: 322 ERKRLLSFVVSGGGPTGVEFAAEMYDLLNEDLTRHFPRLLRNEISVHLIQSRSHILNTYD 381
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 187
+ + YA + ++ V L VK+V K++ DG+ E+P G ++WSTGV
Sbjct: 382 ETVSKYAEDRFARDQVDVLTNSRVKEVCPDKIVFTQKQEDGSLVTKELPAGFVLWSTGVS 441
Query: 188 PSTLVKSL--DLPKSPGGRIGI--DEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
P+ L + L L R + D LR+ + DV+A+GDCS + ++ L
Sbjct: 442 PTALCQKLAHKLGSVQTNRHALETDTHLRLNGTPLGDVYAIGDCSTVQNNIADHIITFLR 501
Query: 242 QVAERQGK 249
+A + GK
Sbjct: 502 TLAWKHGK 509
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMA 287
T LPA AQ A +QG YL N++ G SA D+ GD F Y HLGS+A
Sbjct: 574 TSLPATAQRAHQQGYYLAQKFNKLAHLSEGL--SANDIRDGDLDAAAYKAFEYHHLGSLA 631
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVF 345
IG A+ DL +G +LAG L W V WRS Y + VS+R R +A++WA +F
Sbjct: 632 YIGN-SAVFDL-----GEGWNLAGGL-WAVYAWRSVYFAQSVSFRTRCLLAMDWAKRGLF 684
Query: 346 GR 347
GR
Sbjct: 685 GR 686
>gi|56751412|ref|YP_172113.1| type 2 NADH dehydrogenase [Synechococcus elongatus PCC 6301]
gi|56686371|dbj|BAD79593.1| type 2 NADH dehydrogenase [Synechococcus elongatus PCC 6301]
Length = 444
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 165/334 (49%), Gaps = 33/334 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA FG + A L+ V A E+RR++ L ++ E +++
Sbjct: 99 VEYDYLVVATGASHHYFGNDQWQPFAPGLKTVEDALEMRRRIYFALEQAEQESDPERQQA 158
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDDRL 139
L +VG GPTGVE +G +++ ++R+ + +V V LIE + +L F L
Sbjct: 159 -WLTFTIVGAGPTGVELAGAIAELTRGEMRKEFRNVDTTKAKVILIEGMDRVLPPFPPEL 217
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLVKSL 195
A QL GV + + +V D+ +++ G E+P +W+ GV S L K L
Sbjct: 218 SAQAQVQLEGLGVTVQTKAMVTDIQEDRVVFKTGDDLHEIPSRTTLWAAGVKASPLGKLL 277
Query: 196 ------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
+L + GR+ + L++P+ +V+ +GD + + G LP +A VA +QG
Sbjct: 278 AQRTGAELDRI--GRVIVQPDLQLPTDPNVYVLGDLAHCPDQAGNP-LPGVAAVAMQQGA 334
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
YL GKA R S + DPF Y+ GSMA IGR A+ L G+ L
Sbjct: 335 YL-------GKALKRRLKS----QPVDPFRYQDFGSMAVIGRNAAVARL------AGIRL 377
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+GF +WLVW ++ ++ + ++ V V WA T+
Sbjct: 378 SGFPAWLVWAFIHVWYLIEFDSKLLVMVQWAWTY 411
>gi|359422940|ref|ZP_09214086.1| NADH dehydrogenase [Gordonia amarae NBRC 15530]
gi|358241927|dbj|GAB03668.1| NADH dehydrogenase [Gordonia amarae NBRC 15530]
Length = 472
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 29/333 (8%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YDKL+IA GA+ S FG E A ++ + A E+R ++L +++ E+ RL
Sbjct: 101 YDKLIIAAGADQSYFGNDHFAEYAPGMKTIDDALELRGRILGAFEQAEL-STDPAERERL 159
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH--VTLIEANEILSSFDDRLRH 141
L VV+G GPTGVE +G++++ + ++ + ++ + + L A +L F ++L
Sbjct: 160 LTFVVIGAGPTGVELAGQIAEMSDKTLKDAFRNIDATLARVILLDAAPAVLPPFGEKLGK 219
Query: 142 YATTQLSKSGVRLVRG-IVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVKSL- 195
A +L K GV + G +V D+D L + DGT + VWS GV S L K L
Sbjct: 220 KAAARLEKMGVEIQLGAMVVDLDYDSLTVKEKDGTTRRIESQCKVWSAGVQASPLGKQLA 279
Query: 196 -----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+L ++ GR+ + L +P DVF VGD +P +AQ A + G+Y
Sbjct: 280 EQSGVELDRA--GRVKVGPDLSIPGHPDVFVVGDMMAV------DGVPGVAQGAIQGGRY 331
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ + + E PF Y GSMATI R+ A++ + K
Sbjct: 332 AADAIK-------AELSKGQTPEQRKPFSYYDKGSMATISRFSAVMQVPIPGTKKKFETE 384
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G+ +WL W + +L +V +RNR +NW F
Sbjct: 385 GYFAWLGWLALHLVYLVGFRNRLNTLINWFFAF 417
>gi|81298912|ref|YP_399120.1| type 2 NADH dehydrogenase [Synechococcus elongatus PCC 7942]
gi|81167793|gb|ABB56133.1| type 2 NADH dehydrogenase [Synechococcus elongatus PCC 7942]
Length = 444
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 165/334 (49%), Gaps = 33/334 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD LV+A GA FG + A L+ V A E+RR++ L ++ E +++
Sbjct: 99 VEYDYLVVATGASHHYFGNDQWQPFAPGLKTVEDALEMRRRIYFALEQAEQESDPERQQA 158
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDDRL 139
L +VG GPTGVE +G +++ ++R+ + +V V LIE + +L F L
Sbjct: 159 -WLTFTIVGAGPTGVELAGAIAELTRGEMRKEFRNVDTTKAKVILIEGMDRVLPPFPPEL 217
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLVKSL 195
A QL GV + + +V D+ +++ G E+P +W+ GV S L K L
Sbjct: 218 SAQAQVQLEGLGVTVQTKAMVTDIQEDRVVFKTGDDLHEIPSRTTLWAAGVKASPLGKLL 277
Query: 196 ------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
+L + GR+ + L++P+ +V+ +GD + + G LP +A VA +QG
Sbjct: 278 AQRTGAELDRI--GRVIVQPDLQLPTDPNVYVLGDLAHCPDQAGNP-LPGVAAVAMQQGA 334
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
YL GKA R S + DPF Y+ GSMA IGR A+ L G+ L
Sbjct: 335 YL-------GKALKRRLKS----QPVDPFRYQDFGSMAVIGRNAAVARL------AGIRL 377
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+GF +WLVW ++ ++ + ++ V V WA T+
Sbjct: 378 SGFPAWLVWAFIHVWYLIEFDSKLLVMVQWAWTY 411
>gi|423306876|ref|ZP_17284875.1| hypothetical protein HMPREF1072_03815 [Bacteroides uniformis
CL03T00C23]
gi|423308540|ref|ZP_17286530.1| hypothetical protein HMPREF1073_01280 [Bacteroides uniformis
CL03T12C37]
gi|392677961|gb|EIY71373.1| hypothetical protein HMPREF1072_03815 [Bacteroides uniformis
CL03T00C23]
gi|392686981|gb|EIY80279.1| hypothetical protein HMPREF1073_01280 [Bacteroides uniformis
CL03T12C37]
Length = 424
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 169/344 (49%), Gaps = 23/344 (6%)
Query: 5 CET--VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
CE V E LE ++YD LVIA G + FG G+++ L+ A R +
Sbjct: 82 CEAQQVFPEHNLLETSIGTLAYDYLVIATGCNTNYFGNDGLEKQTMALKNTSEALFNRNQ 141
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYI 121
+L + + G ++EE+ RL+ +VGGG TG+E +G L++ + Q Y + + +
Sbjct: 142 ILDSFEQAQNTG-NKEERRRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEM 200
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
+ L++ ++ +LS+F + L K V + + V ++ +L LNDGT +
Sbjct: 201 RIILLDGSSRLLSAFSEESSKEVADYLKKRDVEIKLNQRVMGYENYQLALNDGTAIDTKN 260
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+ W GV ++L PG R+ +D + R+ ++FA+GD + + P
Sbjct: 261 VFWVAGVKANSLQGLPADAYGPGNRLKVDTYNRLSQYPNIFAIGDTALMISEEYPKGHPQ 320
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
+ Q A +Q + L L R A + ++ PF+Y++ GSMATIGR A+V+L+
Sbjct: 321 VVQPAIQQARNLIRNLQR--------AETGLPLQ---PFIYQNKGSMATIGRNHAVVELK 369
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ L GF +W VW +L +V +NR ++ V+W ++
Sbjct: 370 K------LRFGGFPAWAVWLFIHLMSIVGVKNRLFIFVDWMWSY 407
>gi|124506849|ref|XP_001352022.1| NADH dehydrogenase, putative [Plasmodium falciparum 3D7]
gi|23505050|emb|CAD51833.1| NADH dehydrogenase, putative [Plasmodium falciparum 3D7]
Length = 533
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 132/225 (58%), Gaps = 15/225 (6%)
Query: 15 LEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPG 74
+E K K+ YD L+IA+GA+ +TF I+GV + A F++++ A +IR+K L L +P
Sbjct: 132 IENNKVKLFYDYLIIAVGAKTNTFNINGVDKYAYFVKDIDDALKIRKKFLDILEKCTLPN 191
Query: 75 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 133
IS EEK ++LH VVGGGPTGVE + E +DFI ++V+ Y + ++I +++IE N +L
Sbjct: 192 ISNEEKKKMLHVAVVGGGPTGVEVTAEFADFINKEVKINYKDIFNFISISIIEGGNNLLP 251
Query: 134 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLIL------NDGTEVPYGLLVWSTGV 186
+F + + + L V DVD + N+ ++ YGLL+W++G+
Sbjct: 252 TFTQNISDFTKENFHNLNINVLTNYYVIDVDKHSFHIQSSLNKNEKKKLSYGLLIWASGL 311
Query: 187 GPSTLVKSL--DLP-KSPGGRIGIDEWLRV---PSVQDVFAVGDC 225
+TL++ +P ++ + +DE LRV PS +++A+GDC
Sbjct: 312 AQTTLIQKFLKTIPVQANNAILKVDEKLRVIGIPS-NNIYAIGDC 355
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 16/120 (13%)
Query: 229 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP-FVYRHLGSMA 287
++ K+ P AQ A+++ YL ++ N + + P F+ + GS+A
Sbjct: 425 IDKNYKSPTPT-AQNAKQEAYYLSNVFNNFIHT---------NQKFNIPSFIEKWKGSLA 474
Query: 288 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
IG ++ + DL E KG G S W+ Y+ ++SW++RF+ +++ T +GR
Sbjct: 475 YIGNHQVVADLPY-YELKG----GRFSSTFWKVVYIQLLLSWKSRFHFFIDFIKTKWYGR 529
>gi|317480142|ref|ZP_07939252.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides sp.
4_1_36]
gi|316903689|gb|EFV25533.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides sp.
4_1_36]
Length = 428
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 169/344 (49%), Gaps = 23/344 (6%)
Query: 5 CET--VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
CE V E LE ++YD LVIA G + FG G+++ L+ A R +
Sbjct: 86 CEAQQVFPEHNLLETSIGTLAYDYLVIATGCNTNYFGNDGLEKQTMALKNTSEALFNRNQ 145
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYI 121
+L + + G ++EE+ RL+ +VGGG TG+E +G L++ + Q Y + + +
Sbjct: 146 ILDSFEQAQNTG-NKEERRRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEM 204
Query: 122 HVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
+ L++ ++ +LS+F + L K V + + V ++ +L LNDGT +
Sbjct: 205 RIILLDGSSRLLSAFSEESSKEVADYLKKRDVEIKLNQRVMGYENYQLALNDGTAIDTKN 264
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+ W GV ++L PG R+ +D + R+ ++FA+GD + + P
Sbjct: 265 VFWVAGVKANSLQGLPADAYGPGNRLKVDTYNRLSQYPNIFAIGDTALMISEEYPKGHPQ 324
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
+ Q A +Q + L L R A + ++ PF+Y++ GSMATIGR A+V+L+
Sbjct: 325 VVQPAIQQARNLIRNLQR--------AETGLPLQ---PFIYQNKGSMATIGRNHAVVELK 373
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ L GF +W VW +L +V +NR ++ V+W ++
Sbjct: 374 K------LRFGGFPAWAVWLFIHLMSIVGVKNRLFIFVDWMWSY 411
>gi|425765938|gb|EKV04578.1| NADH-ubiquinone oxidoreductase 64 kDa subunit, putative
[Penicillium digitatum Pd1]
gi|425766954|gb|EKV05543.1| NADH-ubiquinone oxidoreductase 64 kDa subunit, putative
[Penicillium digitatum PHI26]
Length = 686
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 140/245 (57%), Gaps = 16/245 (6%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
F + YDKLV+ +G + G+ G+ EN FL+ + A++I+ K+L N+ L+ +P S+E
Sbjct: 260 NFYLPYDKLVVGVGCVTNPHGVKGL-ENCNFLKTIDDARQIKNKVLENMELACLPTTSDE 318
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + V++ + V +I++ + IL+++D
Sbjct: 319 ERRRLLSFVVCGGGPTGVEFAAELFDLLNEDLLHSFPRIVRNEMSVHIIQSRSHILNTYD 378
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLI---LNDG----TEVPYGLLVWSTGVGP 188
+ L YA + ++ GV L VK+V S +++ + DG E+P GL +WSTGV
Sbjct: 379 EALSKYAEGRFTRDGVEVLTNARVKEVRSDRVLFSQMQDGKTVVKEIPTGLCLWSTGVAR 438
Query: 189 STLVKSLDLP---KSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQV 243
+ + ++L ++ + D LRV + DV+A+GDCS + V+ L V
Sbjct: 439 AEISETLSNKLEGQNNKHALETDSHLRVIGAPLGDVYAIGDCSTVQNNIADNVIRFLRTV 498
Query: 244 AERQG 248
A +G
Sbjct: 499 AWEKG 503
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
Query: 232 TGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD-------PFVYRHLG 284
T T LPA AQ A +QG YL L +I A G A +++ GD F YRHLG
Sbjct: 566 TKLTSLPATAQRANQQGVYLGRKLTKIAAALPGL--KANEVDYGDLDEAVYKAFKYRHLG 623
Query: 285 SMATIGRYKALVDLRQNKESKGLSLAG-FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
S+A I A+ D G+S +G ++ +WRS Y + VS+R R +A++WA
Sbjct: 624 SLAYISN-AAIFDF------GGMSFSGGVIAMYLWRSVYFAQSVSFRTRCMLAMDWAKRA 676
Query: 344 VFGRDISRI 352
+FGR + I
Sbjct: 677 LFGRGMPLI 685
>gi|325293389|ref|YP_004279253.1| NADH dehydrogenase [Agrobacterium sp. H13-3]
gi|325061242|gb|ADY64933.1| NADH dehydrogenase [Agrobacterium sp. H13-3]
Length = 421
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 165/333 (49%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I +D LV+A GA + FG + A L+ + A IRR+LLL +++ +EEE+
Sbjct: 96 IGFDTLVLATGARHAYFGRDEWERAAPGLKTLEDATTIRRRLLLAFERAEL-ATNEEERQ 154
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
L V++G GPTGVE +G +++ + + + +V V L+EA +L F D L
Sbjct: 155 AQLTFVIIGAGPTGVEMAGMIAELAHKALPPEFRNVDTRKSRVLLVEAGPRVLPVFTDDL 214
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L K GV ++ G + + + T P +VW+ GV S K L+
Sbjct: 215 SAYAKQALEKLGVEVLLGTPVTACTDEGVTVGETFYPCRTVVWAAGVQASPAAKWLNAAA 274
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR + L + ++F +GD + + G+ V P +A A++QG ++ ++
Sbjct: 275 DRAGRAIVGPHLNLEDDPNIFVIGDTAAVNQENGRPV-PGIAPAAKQQGAHVAKVI---- 329
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+A + + E PF Y H G++ATIG+ A++D + K L G L+W +W
Sbjct: 330 -----KARLSGEPEPA-PFRYSHQGNLATIGKRAAVIDFGRFK------LKGVLAWWIWG 377
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 378 LAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|444335479|ref|YP_007391848.1| NADH dehydrogenase [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
gi|444299858|gb|AGD98095.1| NADH dehydrogenase [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
Length = 429
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 164/331 (49%), Gaps = 35/331 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A G+ + FG ++ A ++ + A +R L+L S + +E+ RL
Sbjct: 103 YDYLIMATGSVTNYFGNKNIEHFAFPMKSIPEALNLR-SLILQDFESALLTKDSKERERL 161
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN-EILSSF 135
+ V+VGGGPTGVE +G L++ ++Y DY +++ L++A +L
Sbjct: 162 MTFVIVGGGPTGVELAGALAEM------KKYVLPNDYPDLDIQRMNIHLLQATPRLLDGM 215
Query: 136 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
+ A L + GV + + +VKD D + + ++ + ++W+ GV ++K
Sbjct: 216 SEPSAKQAFKNLKELGVNIWLDCLVKDYDGKIVFIDKNKSIESANVIWAAGVK-GAIIKG 274
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVAERQGKYLFS 253
G RI +D++L+ +++FA+GD + ++ S+ P +AQ A +QG YL
Sbjct: 275 FLKEDMEGQRILVDDYLKTLRYKNIFAIGDVAYMIKNSSYPNGHPMMAQPAIQQGNYLAD 334
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
NR + + PF Y++LG+MATIGR KA+ D K L GF
Sbjct: 335 NFNRFLEKKQIK-----------PFRYKNLGTMATIGRNKAVCDFPYFK------LKGFS 377
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+W+VW +L +V +RNR +NW ++
Sbjct: 378 AWIVWMFVHLVSLVGFRNRVIALMNWVIQYL 408
>gi|227549306|ref|ZP_03979355.1| NADH dehydrogenase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078625|gb|EEI16588.1| NADH dehydrogenase [Corynebacterium lipophiloflavum DSM 44291]
Length = 465
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 163/332 (49%), Gaps = 32/332 (9%)
Query: 23 SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSR 82
+YD L++A GA S FG E A L+ + +A EIR +++ ++V +EE + R
Sbjct: 109 AYDSLIVAAGAGQSYFGNDHFAEFAPGLKTLDNALEIRARIITAFERAEVAETAEE-RDR 167
Query: 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFDDRLR 140
LL V+VG GPTGVE +G++++ R YS+ V + LI+ ++L F RL
Sbjct: 168 LLTFVIVGAGPTGVELAGQIAEMAHRSFAHGYSNFVPSQAKIVLIDGLPQVLPPFGKRLG 227
Query: 141 HYATTQLSKSGVRLV-RGIVKDVDSQKLILNDG-----TEVPYGLLVWSTGVGPSTLVK- 193
A +L K GV +V +V +VD + + D T +P +WS GV S L K
Sbjct: 228 KRAQRELEKKGVTVVLNSMVVNVDEESVTYKDTKTEQETTIPSVTKIWSAGVQASPLGKL 287
Query: 194 ---SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250
+ + G++ ++ L V +VF +GD + LP +AQVA + G+Y
Sbjct: 288 IADQVGVEAERNGKVPVNSDLTVGDKSNVFIIGDM------MSRDRLPGVAQVAIQTGQY 341
Query: 251 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 310
+ ++ + E D F Y GSMA + R+ A+V + + + ++
Sbjct: 342 VARVIKE-------QVEHDVAPEARDDFEYFDKGSMAIVSRFNAVVKMGK------VEVS 388
Query: 311 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 342
GF+ WL+W + +++ + RN+F V+W T
Sbjct: 389 GFIGWLMWLAVHVSFLAGARNQFVTMVSWFTN 420
>gi|356517566|ref|XP_003527458.1| PREDICTED: external NADH-ubiquinone oxidoreductase 2,
mitochondrial-like [Glycine max]
Length = 571
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 140/234 (59%), Gaps = 10/234 (4%)
Query: 2 KVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRR 61
KV+C D+ + F I YD LVIA+G ++TF GV+E+A FL+EV A +IR
Sbjct: 135 KVYCRASKDKKLGGQE-DFSIDYDYLVIAMGGRSNTFNTPGVQEHAHFLKEVDEALKIRH 193
Query: 62 KLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 121
++ + +P + EEK +LL VVVGGGPTGVEF+ EL DF++ D+ + Y +KDY+
Sbjct: 194 TVVDLFERASLPSLPVEEKKKLLSFVVVGGGPTGVEFAAELHDFVLEDMAKLYPSLKDYV 253
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSG--VRLVRGIVK----DVDSQKLILNDGTE 174
+TL+EA + IL+ FD R+ +A + ++ G VRL +VK ++ +++
Sbjct: 254 KITLLEAGDHILNMFDKRITEFAEQKFARDGIDVRLGSMVVKVGENEITAKERSSGQIVS 313
Query: 175 VPYGLLVWSTGVG--PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
+P+G++VWSTG+G P + L + + DEWLRV +++A+GDC+
Sbjct: 314 IPHGMVVWSTGIGARPEVVEFMKQLGQVNRRALVTDEWLRVEGSDNIYALGDCA 367
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 237 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 292
LPA AQVA +QG YL + NR+ + + +G PF Y+HLG A +G
Sbjct: 457 LPATAQVAAQQGVYLANCFNRMEECEKYPEGPLRFRGVGRHRFRPFRYKHLGQFAPLGGE 516
Query: 293 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
+ L +S+ WL W S Y ++ VSWR RF V +W F+FGRD S+I
Sbjct: 517 QTAAQL----PGDWISIGQSTQWL-WYSVYTSKQVSWRTRFLVVGDWGRRFIFGRDSSKI 571
>gi|389693481|ref|ZP_10181575.1| NADH dehydrogenase, FAD-containing subunit [Microvirga sp. WSM3557]
gi|388586867|gb|EIM27160.1| NADH dehydrogenase, FAD-containing subunit [Microvirga sp. WSM3557]
Length = 453
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 169/332 (50%), Gaps = 22/332 (6%)
Query: 11 ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLS 70
+ R ++ I YD LV+A GA S FG A L+++ A IRRK+LL +
Sbjct: 86 QARMVQAGSLSIPYDYLVLATGATHSYFGHPEWASVAPGLKQIEDATVIRRKILLAFEHA 145
Query: 71 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN 129
++ + E++ RLL VVVGGGPTGVE +G +++ + + + + V LIEA
Sbjct: 146 ELTDDANEQR-RLLTFVVVGGGPTGVEMAGAIAEVAHHALSAEFRRIDPHSARVILIEAG 204
Query: 130 -EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 187
+L +F + L YA T L + GV + V D + L + T++ G ++W+ GV
Sbjct: 205 PRLLPAFPEDLAAYAQTSLERMGVEVRTNARVTDCTEAGVDLEE-TQIAAGTVIWAAGVV 263
Query: 188 PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
S + L RI ++ L+VP ++FA+GD + ++S GKTV P +A A++
Sbjct: 264 ASPAAEWLGAEHDRAERIKVEPNLKVPGRSEIFAIGDTASVVDSDGKTV-PGIAPAAKQM 322
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
G+Y+ ++ A K G PF YRH G +ATIGR A+V L +
Sbjct: 323 GRYVARVIA---------AEVEKKTSPG-PFRYRHQGDLATIGRKSAVVKL------DSI 366
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
L GF+ WL W A++ ++ RNR VA W
Sbjct: 367 HLTGFIGWLFWGIAHVYFLIGLRNRAVVAFTW 398
>gi|379737011|ref|YP_005330517.1| NADH dehydrogenase, FAD-containing subunit [Blastococcus
saxobsidens DD2]
gi|378784818|emb|CCG04488.1| NADH dehydrogenase, FAD-containing subunit [Blastococcus
saxobsidens DD2]
Length = 475
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 174/358 (48%), Gaps = 43/358 (12%)
Query: 1 MKVHCETVTDEL--RTL-EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQ 57
+ V TVT E+ RTL P YD+L++A GA S FG E A ++ + A
Sbjct: 96 IDVAARTVTSEILGRTLVHP------YDELIVAAGAGQSYFGNDQFAEFAPGMKSIDDAL 149
Query: 58 EIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 117
E+R ++ L+++ +E RL+ VVVG GPTGVE +G++++ R +R+ + ++
Sbjct: 150 ELRGRIFGAFELAEI-ATDPDEIDRLMTFVVVGAGPTGVEMAGQIAELARRTLRRDFRNI 208
Query: 118 KDYIH--VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT- 173
+ L A +L SF +L A QL++ GV + G +V DVD+ L + D
Sbjct: 209 DPSCARIILLDAAPAVLPSFGQKLGDRARRQLNEIGVDVQLGAMVTDVDADGLDVKDADG 268
Query: 174 ---EVPYGLLVWSTGVGPSTLVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCS 226
+ +W+ GV S L + L GRI + L +P ++ VGD
Sbjct: 269 QTRRIQAATKIWAAGVQASELGRILGEQTGAEVDRAGRISVQPDLTLPGHPEIHVVGD-- 326
Query: 227 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM 286
+ + GK LP +AQVA + G+Y + R + G A PF Y GSM
Sbjct: 327 --MMALGK--LPGVAQVAIQGGRYAAEAIER--RVAGTPAQP--------PFHYFDKGSM 372
Query: 287 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
ATI R+ A+ D+ + L +GF +W++W +L +V +++R ++W +F+
Sbjct: 373 ATISRFSAVADVGK------LKFSGFFAWVLWLVVHLMYIVGFKSRITTVLHWMVSFL 424
>gi|88802757|ref|ZP_01118284.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Polaribacter irgensii 23-P]
gi|88781615|gb|EAR12793.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Polaribacter irgensii 23-P]
Length = 423
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 167/331 (50%), Gaps = 25/331 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD L++A G E + FG +KE ++ + A +R +L L L+ + E K
Sbjct: 96 ELAYDALIMATGTETNYFGNENIKEKCLPMKTISDALSLRNTILTRLDLATRIEDAAERK 155
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK--DYIHVTLIEAN-EILSSFDD 137
+ L V+ G GPTGVE SG +++ + + Y +K + + L++ E+LSS
Sbjct: 156 -KYLTFVIAGAGPTGVELSGIIAELSSSVIMKDYPELKEEELGEIYLVDGQKEVLSSMSP 214
Query: 138 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+ YA +L+ GV L+ VKD D + ++L++G ++ L+W+ GV
Sbjct: 215 HAQKYAAKKLTAYGVHLLMDTFVKDFDGESVLLSNGNKIETKNLIWAAGVHAKVFEGFHP 274
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL--PALAQVAERQGKYLFSL 254
G R+ +E+ +V +++A+GDC+ +L+ L P +AQ A +Q K L
Sbjct: 275 DSFGHGKRLKTNEFNQVHLSSNIYALGDCA-FLDGDKNYPLGHPQVAQPAIQQAKNLAD- 332
Query: 255 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 314
N + G +A F Y+ GS+A IGR KA++D K +++GFLS
Sbjct: 333 -NLLKNHGDWKA-----------FEYKDKGSLAIIGRNKAVMDFPNQK----YAMSGFLS 376
Query: 315 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 345
WL+W ++ +V+++++ NW +++
Sbjct: 377 WLIWIFVHIMGLVNFKSKLRALYNWLGYYIY 407
>gi|429738579|ref|ZP_19272379.1| putative phage DNA packaging protein [Prevotella saccharolytica
F0055]
gi|429159876|gb|EKY02372.1| putative phage DNA packaging protein [Prevotella saccharolytica
F0055]
Length = 458
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 31/345 (8%)
Query: 11 ELRTLEPWKF-------KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 63
ELR + P K K+ YD LV+A G ++ FG V+ A ++ V A ++ +
Sbjct: 84 ELRAIFPEKKLIQTSIGKVEYDYLVLAAGTTSNFFGNRNVEHEAMPMKTVDEAMGLQNAI 143
Query: 64 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YI 121
L N+ + + ++ E+ LL+ V+VGGG TGVE +G LS+ + R + H D +
Sbjct: 144 LSNIERA-ITCATKLEQQELLNVVIVGGGATGVEIAGVLSE-MKRTILPHDYHDLDPSLM 201
Query: 122 HVTLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGL 179
++ LIEA N +LS+ L + GV L+ +V D K++L DG+ +
Sbjct: 202 NIYLIEAGNRLLSAMSPESSAAVEKYLRQMGVNILLNKMVTDYQDHKVMLADGSSISTRT 261
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLP 238
+W +GV + G RI +D + RV + DVF +GD C + P
Sbjct: 262 FIWVSGVAGQPVGNLNPEHLGRGRRIRVDTFNRVIGLDDVFCIGDQCLVEGDPEYPNGHP 321
Query: 239 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 298
LAQ A +QG L + R+ K K+++ PF Y++LG+MAT+GR KA+ +
Sbjct: 322 QLAQPAIQQGSNLANNFRRMLK--------GKELK---PFCYKNLGAMATVGRNKAVAEF 370
Query: 299 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ + + GF +WL+W +L ++ RN+ V +NW +
Sbjct: 371 AR------IKMKGFWAWLMWLIVHLRSILGVRNKVVVLLNWVWNY 409
>gi|310819518|ref|YP_003951876.1| NADH dehydrogenase [Stigmatella aurantiaca DW4/3-1]
gi|309392590|gb|ADO70049.1| NADH dehydrogenase [Stigmatella aurantiaca DW4/3-1]
Length = 443
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 173/346 (50%), Gaps = 45/346 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD L++A GA S FG ++A L+ + A EIRR++LL +++ E +
Sbjct: 88 ELAYDSLIVATGATHSYFGNDAWAKHAPGLKSIEDAVEIRRQVLLAFEMAEREP-DPELR 146
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NEIL 132
+LL V+VGGGPTGVE +G L++ R++ V+D+ + L+E + +L
Sbjct: 147 RQLLTFVIVGGGPTGVELAGALAEI------SRHALVRDFQNIDPSQARIILVEGTHHLL 200
Query: 133 SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
++ L A L + GV + G+ V +D + + D +P +W+ GV S L
Sbjct: 201 PTYPQALAERARQSLERLGVEVRAGVRVTQIDETGVFVGD-EHIPARTKLWAAGVAASPL 259
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+SL + GR+ + L +P QDVF +GD + G+ +P +A A +QGK+
Sbjct: 260 ARSLGVALDRAGRVSVSPELTLPGRQDVFVIGDLA--FIKKGEHPIPGVAPAAMQQGKHA 317
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA- 310
+ + R + M+ PF + G+ + IGR A+ GL+LA
Sbjct: 318 ANNIL--------RQLQGQPMQ---PFRFNDRGTFSVIGRGSAV----------GLALAR 356
Query: 311 ----GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G+++WL W ++ ++ +R++ V +NWA ++V R +RI
Sbjct: 357 FPMSGYIAWLAWLFIHVLFLIGFRSKAAVLLNWAYSYVAFRRSARI 402
>gi|429749408|ref|ZP_19282533.1| pyridine nucleotide-disulfide oxidoreductase [Capnocytophaga sp.
oral taxon 332 str. F0381]
gi|429168295|gb|EKY10138.1| pyridine nucleotide-disulfide oxidoreductase [Capnocytophaga sp.
oral taxon 332 str. F0381]
Length = 424
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 162/331 (48%), Gaps = 27/331 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++ YD LV+A GAE++ FG V+E A ++ V A +R L+ + +E +
Sbjct: 96 ELGYDILVMATGAESNFFGNKNVEEKAMPMKTVGDALMLRN-LVYTRLERATRTDDKEVR 154
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK--DYIHVTLIEANE-ILSSFDD 137
+LL + G GPTGVE SG ++ +++ Y + D + LI+ + +L+
Sbjct: 155 RKLLSFAIAGAGPTGVELSGIFAEMKQNIMKKDYPELSQSDLGDIYLIDGQKTVLAPMSK 214
Query: 138 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196
+ + Y L K GV+L G+ VKD + +++L+DGT + L+W+ GV T K +D
Sbjct: 215 KAQEYTEKALLKKGVKLKMGVFVKDFVNDEVVLSDGTILEARNLIWAAGVSAKTF-KGID 273
Query: 197 LPK--SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFS 253
+ G R+ D + ++ +++A+GD C + P LAQVA +Q L
Sbjct: 274 DKEYLGRGKRMKTDAYNKMEGFDNIYAIGDSCIMTADPNYPEGHPQLAQVAIQQADNLV- 332
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
AN D + PF Y GSMA IGR +A+ DL +N + + GF
Sbjct: 333 ------------ANMNNDFQKPKPFSYVDKGSMAIIGRNEAVADLPKN-----IFIKGFW 375
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+W +W ++ +V++RN+ NW ++
Sbjct: 376 AWAIWAFIHIMSLVNFRNKMRAFYNWVGYYI 406
>gi|115372334|ref|ZP_01459643.1| NADH dehydrogenase [Stigmatella aurantiaca DW4/3-1]
gi|115370547|gb|EAU69473.1| NADH dehydrogenase [Stigmatella aurantiaca DW4/3-1]
Length = 420
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 173/346 (50%), Gaps = 45/346 (13%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD L++A GA S FG ++A L+ + A EIRR++LL +++ E +
Sbjct: 65 ELAYDSLIVATGATHSYFGNDAWAKHAPGLKSIEDAVEIRRQVLLAFEMAEREP-DPELR 123
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NEIL 132
+LL V+VGGGPTGVE +G L++ R++ V+D+ + L+E + +L
Sbjct: 124 RQLLTFVIVGGGPTGVELAGALAEI------SRHALVRDFQNIDPSQARIILVEGTHHLL 177
Query: 133 SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 191
++ L A L + GV + G+ V +D + + D +P +W+ GV S L
Sbjct: 178 PTYPQALAERARQSLERLGVEVRAGVRVTQIDETGVFVGD-EHIPARTKLWAAGVAASPL 236
Query: 192 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251
+SL + GR+ + L +P QDVF +GD + G+ +P +A A +QGK+
Sbjct: 237 ARSLGVALDRAGRVSVSPELTLPGRQDVFVIGDLA--FIKKGEHPIPGVAPAAMQQGKHA 294
Query: 252 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA- 310
+ + R + M+ PF + G+ + IGR A+ GL+LA
Sbjct: 295 ANNIL--------RQLQGQPMQ---PFRFNDRGTFSVIGRGSAV----------GLALAR 333
Query: 311 ----GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
G+++WL W ++ ++ +R++ V +NWA ++V R +RI
Sbjct: 334 FPMSGYIAWLAWLFIHVLFLIGFRSKAAVLLNWAYSYVAFRRSARI 379
>gi|424662625|ref|ZP_18099662.1| hypothetical protein HMPREF1205_03011 [Bacteroides fragilis HMW
616]
gi|404576315|gb|EKA81053.1| hypothetical protein HMPREF1205_03011 [Bacteroides fragilis HMW
616]
Length = 448
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 164/327 (50%), Gaps = 22/327 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G ++ FG ++E A ++ V A +R LL N S + +E E+
Sbjct: 101 KAEYDYLVLAAGTTSNFFGNEHIEEEAMPMKTVSEAMGLRNALLANFERS-ITCATERER 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDR 138
LL+ VVVGGG TGVE +G LS+ + Y + +HV LIEA + +L+ +
Sbjct: 160 QELLNVVVVGGGATGVEIAGVLSEMKKFVLPNDYPDMPSSLMHVYLIEAGDRLLAGMSED 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T
Sbjct: 220 SSRHAEQFLREMGVNILLNKRVTDYKDHKVVLEDGTEIATRTFIWVSGVAAITFGNISGE 279
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
G RI +DE+ RV + +FA+GD C + P LAQVA +QG+ L L
Sbjct: 280 LLGRGRRIKVDEFNRVQGTEHIFAIGDQCIQTTDKNYPNGHPQLAQVAIQQGELLAKNLQ 339
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ K K M+ PF YR+LGSMAT+GR +A+ + AG+L+W+
Sbjct: 340 RLEK--------GKPMQ---PFHYRNLGSMATVGRNRAVAEF------SSFKTAGWLAWV 382
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTF 343
+W +L ++ RN+ V +NW +
Sbjct: 383 MWLVVHLRSILGVRNKANVLLNWVWNY 409
>gi|313146122|ref|ZP_07808315.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313134889|gb|EFR52249.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 448
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 163/323 (50%), Gaps = 22/323 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G ++ FG ++E A ++ V A +R LL N S + +E E+
Sbjct: 101 KAEYDYLVLAAGTTSNFFGNEHIEEEAMPMKTVSEAMGLRNALLANFERS-ITCATERER 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDR 138
LL+ VVVGGG TGVE +G LS+ + Y + +HV LIEA + +L+ +
Sbjct: 160 QELLNVVVVGGGATGVEIAGVLSEMKKFVLPNDYPDMPSSLMHVYLIEAGDRLLAGMSED 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T
Sbjct: 220 SSRHAEQFLREMGVNILLNKRVTDYKDHKVVLEDGTEIATRTFIWVSGVAAITFGNISGE 279
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
G RI +DE+ RV + +FA+GD C + P LAQVA +QG+ L L
Sbjct: 280 LLGRGRRIKVDEFNRVQGTEHIFAIGDQCIQTTDKNYPNGHPQLAQVAIQQGELLAKNLQ 339
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ K K M+ PF YR+LGSMAT+GR +A+ + AG+L+W+
Sbjct: 340 RLEK--------GKPMQ---PFHYRNLGSMATVGRNRAVAEF------SSFKTAGWLAWV 382
Query: 317 VWRSAYLTRVVSWRNRFYVAVNW 339
+W +L ++ RN+ V +NW
Sbjct: 383 MWLVVHLRSILGVRNKANVLLNW 405
>gi|336265090|ref|XP_003347319.1| hypothetical protein SMAC_07176 [Sordaria macrospora k-hell]
gi|380088524|emb|CCC13551.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 687
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 138/252 (54%), Gaps = 22/252 (8%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ E+ FL+++ A++IR K++ NL LS +P S+E
Sbjct: 255 RFYVPYDKLVIAVGSSTNPHGVKGL-EHCHFLKDISDARQIRNKIIQNLELSCLPTTSDE 313
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + +++ I V LI++ + IL+++D
Sbjct: 314 ERKRLLSFVVCGGGPTGVEFAAELYDLLNEDLTLHFPRLLRNEISVHLIQSRDHILNTYD 373
Query: 137 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLIL------NDG------TEVPYGLLVWS 183
+ + YA + S+ V LV V +V + ++ DG E+P G +WS
Sbjct: 374 EAVSKYAEDRFSRDQVDVLVNSRVAEVRPESILFTEKGVSTDGKPITITKELPMGFCLWS 433
Query: 184 TGVGPSTLVKSLDLPKSPGGR----IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVL 237
TGV + K L P + D LR+ + DV+A+GDCS + ++
Sbjct: 434 TGVSQTPFCKHLSQKLGPAQTNRHALETDTHLRLNGTPLGDVYAIGDCSTVQNNVADHII 493
Query: 238 PALAQVAERQGK 249
+ +A + GK
Sbjct: 494 TFVRNLAWKHGK 505
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGG-RANSAKDMELG----DPFVYRHLGSMATI 289
T LPA AQ A +QG+YL N++ A G +AN + +L F Y+HLGS+A I
Sbjct: 570 TSLPATAQRAHQQGQYLAHKFNKLAHAAPGLKANEITEGDLDAAVYKAFEYKHLGSLAYI 629
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ D G + G L W V WRS Y T+ VS R R +A++WA +FGR
Sbjct: 630 GN-SAVFDW-----GDGWNFGGGL-WAVYAWRSIYFTQSVSLRTRVLMAMDWAKRALFGR 682
Query: 348 DI 349
D+
Sbjct: 683 DL 684
>gi|423279305|ref|ZP_17258218.1| hypothetical protein HMPREF1203_02435 [Bacteroides fragilis HMW
610]
gi|404585474|gb|EKA90090.1| hypothetical protein HMPREF1203_02435 [Bacteroides fragilis HMW
610]
Length = 448
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 163/323 (50%), Gaps = 22/323 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K YD LV+A G ++ FG ++E A ++ V A +R LL N S + +E E+
Sbjct: 101 KAEYDYLVLAAGTTSNFFGNEHIEEEAMPMKTVSEAMGLRNALLANFERS-ITCATERER 159
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDR 138
LL+ VVVGGG TGVE +G LS+ + Y + +HV LIEA + +L+ +
Sbjct: 160 QELLNVVVVGGGATGVEIAGVLSEMKKFVLPNDYPDMPSSLMHVYLIEAGDRLLAGMSED 219
Query: 139 LRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+A L + GV L+ V D K++L DGTE+ +W +GV T
Sbjct: 220 SSRHAEQFLREMGVNILLNKRVTDYKDHKVVLEDGTEIATRTFIWVSGVAAITFGNISGE 279
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
G RI +DE+ RV + +FA+GD C + P LAQVA +QG+ L L
Sbjct: 280 LLGRGRRIKVDEFNRVQGTEHIFAIGDQCIQTTDKNYPNGHPQLAQVAIQQGELLAKNLQ 339
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
R+ K K M+ PF YR+LGSMAT+GR +A+ + AG+L+W+
Sbjct: 340 RLEK--------GKPMQ---PFHYRNLGSMATVGRNRAVAEF------SSFKTAGWLAWV 382
Query: 317 VWRSAYLTRVVSWRNRFYVAVNW 339
+W +L ++ RN+ V +NW
Sbjct: 383 MWLVVHLRSILGVRNKANVLLNW 405
>gi|429742126|ref|ZP_19275773.1| pyridine nucleotide-disulfide oxidoreductase [Porphyromonas
catoniae F0037]
gi|429157767|gb|EKY00348.1| pyridine nucleotide-disulfide oxidoreductase [Porphyromonas
catoniae F0037]
Length = 442
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 170/337 (50%), Gaps = 40/337 (11%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNL---MLSDVPGISE 77
++ YD L++A G + FG + ++ ++ ++ + +R LL N+ ++SD E
Sbjct: 101 EVKYDYLILACGGTTNFFGNDQIARHSLPMKTLYESMNLRNVLLQNIEKALVSD----DE 156
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-------VTLIEAN- 129
E ++ LL +VGGGP+GVE +G L++ +RY KDY + + L++A+
Sbjct: 157 ERRNALLTVAIVGGGPSGVEIAGALAEM------KRYVLPKDYPYLDSSLFRIHLLDASP 210
Query: 130 EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188
+L + +R A L + GV + G +V D D + L L+DG+E+ ++W +G+
Sbjct: 211 RLLQAMSERSSETAARGLREMGVEIHTGTMVSDYDGKTLRLSDGSEMKTRTVIWVSGIVA 270
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQ 247
+ + G RI +DE V + +VFA+GD C ++ P LAQVA +Q
Sbjct: 271 NAVEGIQAEALGRGRRILVDEHNEVKGLTNVFAIGDQCLMTADANYPNGHPQLAQVAIQQ 330
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
+ L L + ++ + PF Y+ LGSMATIGR +A+ ++ G
Sbjct: 331 ARLLARNLR-----------ARQEGKPLSPFHYKDLGSMATIGRNRAVAEI------GGA 373
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
GF +W++W +L ++S RN+ V +NW +V
Sbjct: 374 KWGGFTAWMLWLVVHLRSILSVRNKVIVLLNWIWNYV 410
>gi|160874289|ref|YP_001553605.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS195]
gi|378707533|ref|YP_005272427.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS678]
gi|418023156|ref|ZP_12662141.1| NADH dehydrogenase [Shewanella baltica OS625]
gi|160859811|gb|ABX48345.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Shewanella baltica OS195]
gi|315266522|gb|ADT93375.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS678]
gi|353537039|gb|EHC06596.1| NADH dehydrogenase [Shewanella baltica OS625]
Length = 429
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 25/322 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+I YD LV+ALG +++F G E+ FL + +A KLL L+ E
Sbjct: 110 QIDYDFLVLALGGVSNSFNTLGADEHCIFLDSLENANLFHHKLLDALL-------QLNET 162
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDR 138
+ +VG G TGVE + EL I Y ++ ++ V LIEA+ +IL +R
Sbjct: 163 QERVSIGIVGAGATGVELAAELHHVIESVKEYGYLNIATHHLDVHLIEASPKILPQLPER 222
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLD 196
+ A L K G+RL G+ VK+V I DG + GL VW+ GV GP
Sbjct: 223 VSARAQAVLDKIGIRLHIGVQVKEVTRDGFITQDGDVIKAGLKVWAAGVKGPKAFQNFTK 282
Query: 197 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLL 255
LP +P ++ +D+ +RV QD++A+GDC+ ++S+G+ V P AQ A + LF +++
Sbjct: 283 LPITPRNQVEVDDCMRVKGHQDIYALGDCALLIQSSGQPV-PPRAQAAAQMADTLFDNIV 341
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
NR+ G+ A FVY+ GS+ ++ R+ A+ +L N S + G ++
Sbjct: 342 NRL----QGKPEKA--------FVYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIAR 389
Query: 316 LVWRSAYLTRVVSWRNRFYVAV 337
L++ S Y + S F V
Sbjct: 390 LMYISLYQRHLASLYGWFSAIV 411
>gi|359764800|ref|ZP_09268641.1| NADH dehydrogenase [Gordonia polyisoprenivorans NBRC 16320]
gi|378720593|ref|YP_005285481.1| NADH dehydrogenase [Gordonia polyisoprenivorans VH2]
gi|359317779|dbj|GAB21474.1| NADH dehydrogenase [Gordonia polyisoprenivorans NBRC 16320]
gi|375755336|gb|AFA76115.1| NADH dehydrogenase [Gordonia polyisoprenivorans VH2]
Length = 498
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 167/336 (49%), Gaps = 36/336 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL---LNLMLSDVPGISEEEK 80
YDKL+IA GA+ S FG E A ++ + HA E+R ++L LSD P E+
Sbjct: 108 YDKLIIAAGADQSYFGNDHFAEYAPGMKTIDHALELRGRILGAFEQAELSDDPA----ER 163
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDDR 138
++LL VVVG GPTGVE +G++++ + ++ + ++ V L++A +L F ++
Sbjct: 164 AKLLTFVVVGAGPTGVELAGQIAEMSDKTLKGAFRNIDPTEARVILLDAAPAVLPPFGEK 223
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTLVK 193
L A +L K GV + G +V D+D L++ DG+ + VWS GV S L K
Sbjct: 224 LGRKAAARLEKMGVEIQLGAMVVDLDYDGLVVKEKDGSTRRIESQCKVWSAGVQASPLGK 283
Query: 194 SL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247
L +L ++ GR+ + L +P +VF VGD + G +P +AQ A +
Sbjct: 284 QLAEQSGVELDRA--GRVKVLPDLTIPDHPEVFVVGDM---MAVDG---VPGVAQGAIQG 335
Query: 248 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 307
G+Y + K G + K PF Y GSMATI R+ A++ + K
Sbjct: 336 GRYAADAIKAEQK--GQTPDQRK------PFSYYDKGSMATISRFSAVMQVPIPGTKKKF 387
Query: 308 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
G+ +WL W + +L +V +RNR +NW F
Sbjct: 388 ETEGYFAWLGWLALHLVYLVGFRNRLNTLINWFFAF 423
>gi|13470607|ref|NP_102176.1| NADH dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14021349|dbj|BAB47962.1| NADH dehydrogenase [Mesorhizobium loti MAFF303099]
Length = 424
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 175/334 (52%), Gaps = 22/334 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
++YD LV+A GA + FG + A L+ + A IRR++LL ++ ++
Sbjct: 101 VAYDTLVLATGARHAYFGHDEWEPFAPGLKTLEDATTIRRRILLAFEQAERE-TDPAKRE 159
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRL 139
LL +VGGGPTGVE +G + + +R + ++ V LIEA + IL++F +L
Sbjct: 160 ALLTIAIVGGGPTGVELAGTIVELAHDTLRGEFRNIDTRQTRVVLIEAGDRILANFAPKL 219
Query: 140 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 198
YA+ L + GV + G V D++ ++ D ++ ++W+ GV S + L
Sbjct: 220 SDYASKALERLGVTVELGRAVTRCDAEGVVFGD-KQLAARTILWAAGVAASPAAEWLGAK 278
Query: 199 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 258
GR+ ++ L VP ++F +GD + L G+ V P +A A+++G+++ + +
Sbjct: 279 ADRAGRVLVEPDLGVPGSPEIFVIGDAALVLRPDGRPV-PGVAPSAKQEGRHVAATI--- 334
Query: 259 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 318
KA G N+A+ PF Y+H G +ATIG+ A +D K L G+L+W +W
Sbjct: 335 -KARLGGDNTAR------PFHYKHAGDLATIGKRAAAIDFGWIK------LTGWLAWWLW 381
Query: 319 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ +RNR V+++W +V G+ +R+
Sbjct: 382 GIAHIYFLIGFRNRLAVSLSWLWIYVTGQRSARL 415
>gi|414173433|ref|ZP_11428196.1| hypothetical protein HMPREF9695_01842 [Afipia broomeae ATCC 49717]
gi|410892085|gb|EKS39881.1| hypothetical protein HMPREF9695_01842 [Afipia broomeae ATCC 49717]
Length = 429
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 171/333 (51%), Gaps = 20/333 (6%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I++D L++A GA + FG + A L+ + A +IRR++L ++ E++
Sbjct: 104 IAFDTLILATGARHAYFGHDEWEPYAPGLKTLEDATKIRRRILAAFEQAEWE-TDPAERA 162
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRL 139
+ L V++G GPTGVE +G +++ +R + + V LIEA ILSSF + L
Sbjct: 163 KFLTFVIIGAGPTGVELAGTIAELARDTLRDEFRNFDTRSARVVLIEAGPRILSSFSEDL 222
Query: 140 RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 199
YA L++ GV + G + + G +P ++W+ GV S + L +P
Sbjct: 223 SDYAQRALTRLGVEVKLGHAVSKCGEGGVELGGEFLPAKTIIWAAGVAASPAAEWLHVPA 282
Query: 200 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259
GR+ ++ L P D+F +GD + ++ES ++P +A A+++G+Y + RI
Sbjct: 283 DRAGRVLVEPDLTAPGHPDIFVIGDAA-HVESADGKLVPGVAPAAKQEGQY---VARRIM 338
Query: 260 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 319
+ GR G+ F Y++ G++ATIG+ A+VD + L G L+W +W
Sbjct: 339 ERLRGR-------NPGERFAYKNAGNLATIGKRAAIVDF------GWIKLKGRLAWWMWG 385
Query: 320 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
A++ ++ RNR VA+NW ++ G+ +R+
Sbjct: 386 VAHIFFLIGLRNRLAVAMNWLWIYISGQRSARL 418
>gi|374597642|ref|ZP_09670644.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Myroides odoratus DSM 2801]
gi|423324027|ref|ZP_17301869.1| hypothetical protein HMPREF9716_01226 [Myroides odoratimimus CIP
103059]
gi|373909112|gb|EHQ40961.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Myroides odoratus DSM 2801]
gi|404608976|gb|EKB08407.1| hypothetical protein HMPREF9716_01226 [Myroides odoratimimus CIP
103059]
Length = 434
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 165/339 (48%), Gaps = 47/339 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN----LMLSDVPGISE 77
I +D LVIA G++ + FG +++++ ++ + + IR +L N L+ +D E
Sbjct: 101 IFFDYLVIATGSKTNFFGNTAIQQHSMAMKTIPQSLNIRSLVLENFEEALLTND-----E 155
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIE-AN 129
+EK L++ V+VG GPTGVE +G L++ +++ KDY + + +I+ +
Sbjct: 156 KEKRALMNFVIVGAGPTGVELAGALAEM------KKHVLPKDYPDLDIRQMEINVIQGGS 209
Query: 130 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188
++L + ++ A L K GV + V IV + D + + G E ++W+ GV
Sbjct: 210 KVLDAMSEKSSRRAQEFLEKLGVNVWVNEIVTNFDGKTVQTKSGLEFQTETVIWTAGVMG 269
Query: 189 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248
+ + G R+ ++E+ +V D+FA+GD + + P +AQ A +QG
Sbjct: 270 AVIDGFEASVIQRGNRLKVNEYNQVEGFTDIFAIGDVAAMVTENLPMGHPMMAQPAIQQG 329
Query: 249 KYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESK 305
+ L A + + G P F Y GSMATIGR KA+VDL +
Sbjct: 330 QLL--------------ATNLIQLREGKPLKKFTYNDKGSMATIGRNKAVVDLPK----- 370
Query: 306 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 344
+GF +W VW +L ++ +RN+F V NW ++
Sbjct: 371 -FHFSGFFAWFVWMFVHLMSLIGFRNKFLVFWNWVYNYL 408
>gi|443318305|ref|ZP_21047561.1| NADH dehydrogenase, FAD-containing subunit [Leptolyngbya sp. PCC
6406]
gi|442782111|gb|ELR92195.1| NADH dehydrogenase, FAD-containing subunit [Leptolyngbya sp. PCC
6406]
Length = 452
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 169/352 (48%), Gaps = 42/352 (11%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
+ YD L+IA G FG ++ A ++ V A E+RR++ L ++ E++
Sbjct: 114 VPYDSLIIATGGAHHYFGNDHWEKLAPSIKTVEDALEVRRRIFLAFEAAE-KETDPEQRQ 172
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDDRL 139
L+ +V GGGPTGVE +G L+D ++Q + + D + L+E + +L F L
Sbjct: 173 ALMTFLVAGGGPTGVELAGALADLAYSTLKQDFRAIDTDATRIILVEGMDRLLPPFPPEL 232
Query: 140 RHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGPSTLVKSL 195
+A L K V + + +V ++ ++ L G TE+ ++W+ GV S + + +
Sbjct: 233 SAHAEAALKKQRVEVRTKTLVTSIEGDRVRLRSGDEETELRTKTVLWAAGVKASAMGRII 292
Query: 196 ------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249
D ++ GR+ ++ L +P+ ++F VGD + Y G+ LP +A VA +QGK
Sbjct: 293 ADRTGSDCDRA--GRVIVEADLSLPNHANIFVVGDLAHYAHQGGQP-LPGVAPVAMQQGK 349
Query: 250 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 309
Y+ L+ KA E PF YR GS+A IGR A+V+ L L
Sbjct: 350 YVAKLIQHRLKA-----------EPIPPFYYRDAGSLAVIGRNAAVVNF------NWLKL 392
Query: 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNW---------ATTFVFGRDISRI 352
GF +W++W ++ ++ + N+ V W + + GRD+ ++
Sbjct: 393 TGFPAWVIWLFVHIFYLIEFDNKVVVMTQWMWGYFTRNQGSRLITGRDVDKV 444
>gi|329962845|ref|ZP_08300730.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides fluxus
YIT 12057]
gi|328529402|gb|EGF56315.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides fluxus
YIT 12057]
Length = 427
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 24/344 (6%)
Query: 5 CET--VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 62
CE V E LE ++YD LVI+ G + + FG + L+ A R +
Sbjct: 86 CEAQRVIPENNLLETSIGTLAYDYLVISTGCDTNYFGNASMARQTMALKNTSEALFNRNQ 145
Query: 63 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYI 121
+L + + G +EEE+ RL+ +VGGG TG+E +G L++ + Q + + + +
Sbjct: 146 ILDSFEQAQNTG-NEEERKRLMTFAIVGGGATGIELAGALAEMRKFVLPQDFPDLDINEM 204
Query: 122 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGL 179
+ LI+A+ +LS+F D L K V + + V ++ +L+L+DGT +
Sbjct: 205 RIILIDASPRLLSAFSDASSRDVEDYLHKRNVEIRLNARVVSYENNELVLSDGT-IETKN 263
Query: 180 LVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239
+ W GV +++ PG R+ +D + R+ D+FA+GD + + S P
Sbjct: 264 VFWVAGVKANSIQGLPAEAYGPGNRLKVDSYNRLVDFPDIFAIGDTALMVSSEYPKGHPQ 323
Query: 240 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 299
+ Q A +Q + L L+R+ + R PF+YR+ GSMATIGR A+V+L
Sbjct: 324 VVQPAIQQARNLIYNLHRMQEGLPLR-----------PFIYRNKGSMATIGRNHAVVELE 372
Query: 300 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+ L GF +W VW +L +V +NR ++ ++W ++
Sbjct: 373 K------LRFGGFPAWAVWLFIHLMSIVGVKNRLFIFIDWMWSY 410
>gi|71027847|ref|XP_763567.1| NADH dehydrogenase [Theileria parva strain Muguga]
gi|68350520|gb|EAN31284.1| NADH dehydrogenase (ubiquinone), putative [Theileria parva]
Length = 543
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 127/217 (58%), Gaps = 13/217 (5%)
Query: 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79
F +SYD LVIA+GA+ +TFG GV+E A FL+E+ HA+ ++++ N + +P ++ +
Sbjct: 139 FSVSYDFLVIAVGAQTNTFGTKGVEEYAYFLKELEHAELAFQRIVDNFRAASMPSVTNSD 198
Query: 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDR 138
+ RLLH +VVGGGPTGVE +GELS + + + Y + ++ V+++EA + +L S
Sbjct: 199 RKRLLHFLVVGGGPTGVESAGELSVLMNSHLGKIYPELMPFVKVSIVEAGQRLLPSLAQN 258
Query: 139 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-----DGTEVPYGLLVWSTGVGPSTLVK 193
Y SKS +V +V + IL + EV GL++W++G+ + LV
Sbjct: 259 TSKYVLKVFSKSVNMYFGKVVSEVREKSCILKELASGNTEEVECGLVLWASGLKETDLVM 318
Query: 194 SL----DLPKSPGGR-IGIDEWLRVPSVQDVFAVGDC 225
L ++P+ G R + +D++LR+ ++F +GDC
Sbjct: 319 KLKRKWNVPE--GSRALLVDQYLRLQGSNNIFCLGDC 353
>gi|400288306|ref|ZP_10790338.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Psychrobacter sp. PAMC 21119]
Length = 444
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 160/337 (47%), Gaps = 29/337 (8%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+SYD+L+IA GAE + FG ++ A ++ + A IR +L + + EE+
Sbjct: 111 NVSYDRLIIATGAETNYFGNKDIEAYALPMKTIKDALSIRNHMLAQFNYA--ASLPVEER 168
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEIL-SSFDDR 138
L V+ GGGP+GVE +G +S+ + + + Y + + + +TL+ A+ +L +
Sbjct: 169 EPYLSIVIAGGGPSGVELAGVMSEIRLYTLHKEYPELLENVGGITLVTADPVLLAPMSAE 228
Query: 139 LRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+ Y Q+ K V LV V D + L G + L+W+ GV + L++
Sbjct: 229 AQRYTQLQMEKFNVDLVFSDPVARYDGHIVTLKSGKTLHTHNLIWTAGVTCEP-INGLNV 287
Query: 198 PK-SPGGRIGIDEWLRVPSVQDVFAVGDCS-GYLESTGKTVLPALAQVAERQGKYLFSLL 255
G R+ +D L + + +D++A+GD + + P L QVA QG YL
Sbjct: 288 DDYGRGNRLMVDAHLALINHKDIYALGDIALATHDDHYPNGHPQLGQVASSQGTYL---- 343
Query: 256 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 315
G+ S K +E PF Y+H G MA IGR A+ D+ KG+ L G ++W
Sbjct: 344 --------GKYLSDKTVE---PFQYKHSGDMAMIGRLTAVADI------KGMHLKGIIAW 386
Query: 316 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 352
L W ++ + + +NR NW T F+ G R+
Sbjct: 387 LAWVVIHILSLSTAKNRLATTWNWMTAFLTGNQSFRM 423
>gi|302406923|ref|XP_003001297.1| external NADH-ubiquinone oxidoreductase [Verticillium albo-atrum
VaMs.102]
gi|261359804|gb|EEY22232.1| external NADH-ubiquinone oxidoreductase [Verticillium albo-atrum
VaMs.102]
Length = 645
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 143/248 (57%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL++++ A+ IR ++ NL S +P ++E
Sbjct: 217 RFYVPYDKLVIAVGSTTNPHGVKGL-ENAHFLKDINDARLIRNSIIRNLEKSCLPTTTDE 275
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + + +++ I V LI++ + IL+++D
Sbjct: 276 ERKRLLSFVVSGGGPTGVEFAAELFDLLNEDLTENFPRLLRNQISVHLIQSRSHILNTYD 335
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTGVG 187
+ + YA + ++ V + + V++V K+I +DG+ E+P G +WSTGV
Sbjct: 336 EAVSKYAEARFARDQVDVQINSRVQEVQPDKIIYTQRQDDGSIVTKEIPMGFCLWSTGVS 395
Query: 188 PSTLVKSLDLP----KSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ K L ++ + D LR+ + DV+A+GDCS + ++ L
Sbjct: 396 QTEFCKRLSEKLGSMQTNRHALETDTHLRLNGAPLGDVYAIGDCSTVQNNVADHIVTFLR 455
Query: 242 QVAERQGK 249
+A ++GK
Sbjct: 456 NLAWKRGK 463
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGKAGGG-RANSAKDMELGD----PFVYRHLGSMATI 289
T LPA AQ A +QG+YL N++ + R N +D ++ F Y HLGS+A I
Sbjct: 528 TSLPATAQRAHQQGQYLAHKFNKMARTADALRQNEIQDGDIDTVVYRAFEYHHLGSLAYI 587
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTRVVSWRNRFYVAVNWATTFVFGR 347
G A+ DL Q G ++ G L W V WRS Y + VS+R R +A++WA +FGR
Sbjct: 588 GN-SAVFDLGQ-----GWNITGGL-WAVYAWRSVYFAQSVSFRTRMLLAMDWAKRGLFGR 640
Query: 348 DI 349
D+
Sbjct: 641 DL 642
>gi|346977073|gb|EGY20525.1| external NADH-ubiquinone oxidoreductase [Verticillium dahliae
VdLs.17]
Length = 674
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 143/248 (57%), Gaps = 18/248 (7%)
Query: 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEE 78
+F + YDKLVIA+G+ + G+ G+ ENA FL++++ A+ IR ++ NL S +P ++E
Sbjct: 263 RFYVPYDKLVIAVGSTTNPHGVKGL-ENAHFLKDINDARLIRNSIIRNLEKSCLPTTTDE 321
Query: 79 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILSSFD 136
E+ RLL VV GGGPTGVEF+ EL D + D+ + + +++ I V LI++ + IL+++D
Sbjct: 322 ERKRLLSFVVSGGGPTGVEFAAELFDLLNEDLTENFPRLLRNQISVHLIQSRSHILNTYD 381
Query: 137 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTGVG 187
+ + YA + ++ V + + V++V K+I +DG+ E+P G +WSTGV
Sbjct: 382 EAVSKYAEARFARDQVDVQINSRVQEVQPDKIIYTQRQDDGSIVTKEIPMGFCLWSTGVS 441
Query: 188 PSTLVKSLD--LPKSPGGR--IGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALA 241
+ K L L R + D LR+ + DV+A+GDCS + ++ L
Sbjct: 442 QTEFCKRLSDKLGSMQTNRHALETDTHLRLNGAPLGDVYAIGDCSTVQNNVADHIVTFLR 501
Query: 242 QVAERQGK 249
+A ++GK
Sbjct: 502 NLAWKRGK 509
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 235 TVLPALAQVAERQGKYLFSLLNRIGK-AGGGRANSAKDMELGD----PFVYRHLGSMATI 289
T LPA AQ A +QG+YL N++ + A R N +D ++ F Y HLGS+A I
Sbjct: 574 TSLPATAQRAHQQGQYLAHKFNKMARTADALRQNEIQDGDIDSVVYRAFEYHHLGSLAYI 633
Query: 290 GRYKALVDLRQNKESKGLSLAGFLSWLV--WRSAYLTR 325
G A+ DL Q G ++ G L W V WRS Y +
Sbjct: 634 GN-SAVFDLGQ-----GWNITGGL-WAVYAWRSVYFAQ 664
>gi|365899628|ref|ZP_09437519.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Bradyrhizobium sp. STM 3843]
gi|365419589|emb|CCE10061.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Bradyrhizobium sp. STM 3843]
Length = 424
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 168/331 (50%), Gaps = 25/331 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
+++YD LV+A GA + FG + A L+ + A +RR++L+ ++ ++
Sbjct: 100 EVAYDTLVLATGARHAYFGHDEWEPFAPGLKTLEDATTLRRRILVAFERAERE-TDPAKR 158
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDR 138
+ L+ V++G GPTGVE +G +++ + + ++ + V LIEA +L+ F D
Sbjct: 159 AALMTFVIIGAGPTGVELAGTIAELARSTLPPDFRNIDTHGTRVLLIEAGPRVLAGFPDD 218
Query: 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L YA L + GV +V G V D ++ ++ G ++ ++W+ GV S + L+
Sbjct: 219 LSAYALKSLERIGVEVVLGQPVTDCNADGVVYG-GKQLDAKTIIWAAGVRASRAAEWLNA 277
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
P GR+ + L VP ++FA+GD G+ V P +A A+++G+Y +
Sbjct: 278 PADRAGRLQVAPDLTVPGHPEIFAIGDTITIPAWNGQPV-PGIAPAAKQEGRY---VAEA 333
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
I GGR+ S PF Y H GS+A IG+ A++D L L G ++W +
Sbjct: 334 IKARLGGRSLS--------PFRYSHAGSLAQIGKRLAVIDF------GWLKLRGAIAWWI 379
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
W A++ ++ RNR VA++W ++ RD
Sbjct: 380 WGLAHIYFLIGLRNRLAVALSW--LWIHARD 408
>gi|372209870|ref|ZP_09497672.1| NADH dehydrogenase (ubiquinone) [Flavobacteriaceae bacterium S85]
Length = 435
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 160/327 (48%), Gaps = 21/327 (6%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
++SYD L+I G + + FG +K++A ++ + A +R +L N + V EE +
Sbjct: 99 ELSYDYLIINTGTKTNFFGNKEIKKHAMPMKTIPQALNLRSLILQNFERATVEA-DEEVQ 157
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDR 138
LL+ V+VG GPTGVE +G +++F + Y + + + + L+E A+ +L +
Sbjct: 158 RFLLNFVIVGAGPTGVELAGAIAEFKQSVLPLDYPDLNSELMQINLLEGADRVLPPMSEH 217
Query: 139 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
+T L + GV + IV + D + DG E L+WS GV + + +
Sbjct: 218 ASKKSTQFLKELGVEIHTNTIVTEYDGKLAKTKDGKEFASRTLIWSAGVIANRIDGFSEE 277
Query: 198 PKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256
P R ++E+ +V +VFA+GD + P +AQ A +Q L
Sbjct: 278 ASEPRSKRYYVNEFNQVKGYSNVFALGDVALMASKDYPRGHPQVAQPAIQQAVNLAKNFP 337
Query: 257 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 316
+I K K+++ PFVY GSMATIGR KA+ D+++ L GF +WL
Sbjct: 338 KILKGN-------KNLK---PFVYNDKGSMATIGRNKAVADIKK------LKFGGFFAWL 381
Query: 317 VWRSAYLTRVVSWRNRFYVAVNWATTF 343
+W + +L +V ++NR + + W +
Sbjct: 382 IWMAVHLISLVGFKNRLVILITWIYNY 408
>gi|261749513|ref|YP_003257199.1| type II NADH dehydrogenase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497606|gb|ACX84056.1| putative type II NADH dehydrogenase [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 429
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 163/330 (49%), Gaps = 35/330 (10%)
Query: 24 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83
YD L++A G+ + FG ++ A ++ + A +R L+L S + +E+ RL
Sbjct: 103 YDYLIMATGSVTNYFGNKNIEHFALPMKSIPEALNLR-SLILQDFESALLTKDSKERERL 161
Query: 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN-EILSSF 135
+ V+VGGGPTGVE +G L++ ++Y DY +++ L++A +L
Sbjct: 162 MTFVIVGGGPTGVELAGALAEM------KKYVLQNDYPDLDIQRMNIHLLQATPRLLDGM 215
Query: 136 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 194
+ A L + GV + + +VKD D + + ++ + ++W+ GV ++K
Sbjct: 216 SETSAKQAFKNLKELGVNIWLDCLVKDYDGKIVFIDKNKSIESANVIWAAGV-KGAIIKG 274
Query: 195 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKYLFS 253
G RI +D++L+ +++FA+GD + +++ + P +AQ A +QG YL
Sbjct: 275 FLKEDMEGKRILVDDYLKTLRYKNIFAIGDVAYMIKNHSYPNGHPMMAQPAIQQGNYLAD 334
Query: 254 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 313
NR + + PF Y++LG+MATIGR KA+ D K L GF
Sbjct: 335 NFNRFLEKKQIK-----------PFRYKNLGTMATIGRNKAVCDFPYFK------LKGFS 377
Query: 314 SWLVWRSAYLTRVVSWRNRFYVAVNWATTF 343
+W+VW +L +V +RNR +NW +
Sbjct: 378 AWIVWMFVHLVSLVGFRNRVIALMNWVIQY 407
>gi|386740344|ref|YP_006213524.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 31]
gi|384477038|gb|AFH90834.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 31]
Length = 452
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 164/338 (48%), Gaps = 33/338 (9%)
Query: 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 73
+L + I YD L++A GA S FG ++A ++ + A E+R ++L +++
Sbjct: 100 SLGEYSKTIEYDSLIVAAGAGQSYFGNDHFAQHAPGMKTIDDALELRARILGAFERAEIC 159
Query: 74 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEI 131
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + LI+ A +I
Sbjct: 160 D-DPVERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILIDGAPQI 218
Query: 132 LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL-----VWSTG 185
L F RL A +L K GV + + IV D+D + T+ + +WS G
Sbjct: 219 LPPFGKRLGRNAQRELEKIGVTVKLNAIVTDLDEDSVTYKSTTDNSTHTINSFCKIWSAG 278
Query: 186 VGPSTLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241
V S L K L++ GR+ ++ L V S ++VFA+GD LP +A
Sbjct: 279 VAASPLGKVLADQLEVEVDRAGRVPVNPDLSVGSDKNVFAIGDMMSL------NNLPGVA 332
Query: 242 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 301
Q A + G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 333 QTAIQGGAY---VAEQIAAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK- 383
Query: 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+ + GF+ W +W +L +V +RNR A +W
Sbjct: 384 -----VEVTGFIGWAMWLCVHLMFLVGFRNRATAAFSW 416
>gi|395237438|ref|ZP_10415511.1| NADH dehydrogenase [Turicella otitidis ATCC 51513]
gi|423350674|ref|ZP_17328326.1| hypothetical protein HMPREF9719_00621 [Turicella otitidis ATCC
51513]
gi|394487295|emb|CCI83599.1| NADH dehydrogenase [Turicella otitidis ATCC 51513]
gi|404387275|gb|EJZ82396.1| hypothetical protein HMPREF9719_00621 [Turicella otitidis ATCC
51513]
Length = 457
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 175/361 (48%), Gaps = 42/361 (11%)
Query: 1 MKVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 60
+ V +TVT ++ P + YD L++A G S FG + A L+ + A EIR
Sbjct: 87 INVDEQTVTADI---GPSRRDFEYDDLILASGGNQSYFGNDHFAQYAPGLKTLDDALEIR 143
Query: 61 RKLLLNLM---LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 117
+ + L+D P EE+ +LL+ V++G GPTGVE +G+LS+ R + + ++
Sbjct: 144 GRFIDAFERAELTDDP----EERQKLLNFVIIGAGPTGVELAGQLSEMAHRTLSGEFRNI 199
Query: 118 K-DYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL--NDG 172
D + + L++ A ++L F +L A L K G+ + + +V +VD+ + DG
Sbjct: 200 NPDNVKIYLLDGAPQVLPPFGKKLGRKAQRMLEKLGIEVRLNAMVSNVDATSVSYKTKDG 259
Query: 173 TEVPYGLL--VWSTGVGPSTL----VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226
EV VWS GV S+L + + + GG+I ++E L V +VF VGD
Sbjct: 260 DEVTLESYAKVWSAGVSASSLGARIAEQVGIDPDRGGKIPVNEDLTVGDKDNVFIVGDV- 318
Query: 227 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM 286
+ LP +AQVA + G Y +I K G KD E PF Y GSM
Sbjct: 319 -----MSRDKLPGVAQVAIQSGVY---AAQQIAKRAEGE--DPKDRE---PFSYYDKGSM 365
Query: 287 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 346
A I R+KA+ + ++ LAG + W +W +L + R+RF V+W + +F
Sbjct: 366 AIISRFKAVAKIGDSE------LAGLVPWFMWLGVHLWYMSGRRSRFNALVSWVSN-IFS 418
Query: 347 R 347
R
Sbjct: 419 R 419
>gi|441496041|ref|ZP_20978276.1| NADH dehydrogenase [Fulvivirga imtechensis AK7]
gi|441440000|gb|ELR73283.1| NADH dehydrogenase [Fulvivirga imtechensis AK7]
Length = 441
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 167/342 (48%), Gaps = 47/342 (13%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLN----LMLSDVPGISE 77
+ YD LVIA GA + FG+ ++ +A ++ + A IR +LL N L+++D
Sbjct: 123 LRYDYLVIATGARTNYFGMKDIERHALPMKSISDAIGIRNRLLRNYEEALLIND-----P 177
Query: 78 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIE-AN 129
E+K +L++ V+ GGGPTGVE +G +++F ++Y DY + LIE
Sbjct: 178 EQKDQLMNVVIAGGGPTGVELAGAIAEF------KKYIMPHDYPDLDVKSAKIHLIELTP 231
Query: 130 EILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189
E+L + D A L + V + + +++ D +P +++W+ GV +
Sbjct: 232 ELLPAMSDEASQKAEEYLRQLSVIIKTNTKIEGYDGRVVRTDAGNIPARVMLWTGGVSGA 291
Query: 190 TLV---KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246
L K L K GRI + RV +VFA+GD + P LA VA +
Sbjct: 292 ILPGLGKGLVTKK---GRIKANASGRVKGYDNVFAIGDVAQIETKNYPQGHPQLASVAVQ 348
Query: 247 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 306
QGK+L + L R K EL + F Y + G+MAT+GR KA+VD+++ K
Sbjct: 349 QGKFLATNLTR----------HIKGKELKE-FHYINKGTMATVGRKKAVVDMKKWK---- 393
Query: 307 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 348
G +WLVW S +L +V ++N+ +NWA + F D
Sbjct: 394 --FHGAAAWLVWLSVHLYSLVGFKNKVVTFINWAWNY-FNHD 432
>gi|307564612|ref|ZP_07627148.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella amnii CRIS
21A-A]
gi|307346682|gb|EFN91983.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella amnii CRIS
21A-A]
Length = 429
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 170/327 (51%), Gaps = 31/327 (9%)
Query: 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 81
I YD LVIA GA + FG ++EN ++ V A +R +L NL +++ ++K
Sbjct: 102 IEYDYLVIAAGATTNYFGNKQIQENCLPMKTVSEAMHLRNTILRNLEKAEIEK-DPDKKQ 160
Query: 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIE-ANEILSSFDDR 138
L++ V+VGGGP GVE +G +++ + + Y H+ + +H+ L+ A+ +LS+ D+
Sbjct: 161 ALMNVVIVGGGPAGVEIAGAVAEMKKNVIARDYPHLAANNRMHIYLVNAADRLLSTMDEY 220
Query: 139 LRHYATTQLSKSGVRLVRGIVK-DVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
A L V + + + ++ L + G ++P ++W +GV + + L
Sbjct: 221 SSQKALEGLKALYVHVRQPYMALSYENGVLKTDKGLDIPAETVIWVSGVCATHIE---GL 277
Query: 198 PKSP---GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK--TVLPALAQVAERQGKYLF 252
PK GRI D + +V V+DV+A+GD S ++E + P LAQVA +Q K +
Sbjct: 278 PKDSYGRAGRIKTDRFCKVKGVEDVYAIGDIS-FVEGDEEYPNGHPQLAQVAIQQAKCVA 336
Query: 253 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 312
N + G K E+ F Y++LG+MATIGR +A+ ++ ++K +GF
Sbjct: 337 K--NFEAEVKG------KSPEM---FKYKNLGTMATIGRNRAVAEIGKSK------FSGF 379
Query: 313 LSWLVWRSAYLTRVVSWRNRFYVAVNW 339
+W +W +L ++ +N+ + +NW
Sbjct: 380 FAWFLWLVVHLRSILGVKNKTIILLNW 406
>gi|171909802|ref|ZP_02925272.1| putative NADH dehydrogenase [Verrucomicrobium spinosum DSM 4136]
Length = 427
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 162/326 (49%), Gaps = 23/326 (7%)
Query: 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEK 80
K +D L++A GA S FG + +A L+ + A IRR+LLL L++ E+
Sbjct: 102 KFPFDYLIVATGARHSYFGHPEWEASAPGLKTLDDALNIRRRLLLAFELAEA-TTDAVER 160
Query: 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFDDR 138
+LL VVVG GPTGVE +G +S+ + + + H+ ++ + L A+ +L FD
Sbjct: 161 EKLLTFVVVGAGPTGVEMAGAISEIARETMVRDFRHIDPREAKVILLDAADRVLPVFDPT 220
Query: 139 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197
L A QL GV + G+ V+ +D + + G +P ++W+ G S LVK L
Sbjct: 221 LSGKALAQLRDLGVEVKLGVAVQGLDENGVTIPGGY-IPSRTVIWAAGNAASPLVKQLPG 279
Query: 198 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 257
GR+ + L + +++ +GD + L GK LP ++ VA +QGK + N
Sbjct: 280 EFDRSGRVIVQPELNLKEQANIYVIGDTAHCLGKDGKP-LPGVSPVAMQQGK--LAAANI 336
Query: 258 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 317
+ + G + PF Y GSMATIGR++A+ DL K +G+++W+
Sbjct: 337 LAQIAG---------QPLKPFKYWDRGSMATIGRHRAVADLHFVK------FSGWVAWMA 381
Query: 318 WRSAYLTRVVSWRNRFYVAVNWATTF 343
W +L ++ R+R V + W ++
Sbjct: 382 WVFVHLIFLIGLRSRVSVFLIWVWSY 407
>gi|333373994|ref|ZP_08465887.1| pyridine nucleotide-disulfide oxidoreductase [Desmospora sp. 8437]
gi|332968578|gb|EGK07633.1| pyridine nucleotide-disulfide oxidoreductase [Desmospora sp. 8437]
Length = 402
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 152/298 (51%), Gaps = 27/298 (9%)
Query: 8 VTDELRTLEPWKFKI--------SYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 59
V DE+ ++P +I YD LV LG+ TFGI G+ ENA F+R ++ ++I
Sbjct: 82 VQDEVTRVDPENKEIHLAGREPLKYDYLVFGLGSAPETFGIKGLLENAFFIRNLNGVRQI 141
Query: 60 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 119
R + M S SEE++ LL VV G G TG+EF GEL D I RQ + ++
Sbjct: 142 REH--IEYMFSQYNN-SEEKRDELLTIVVGGAGFTGIEFVGELVDRIPELCRQ-FDIPRE 197
Query: 120 YIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPY 177
+ + +EA +L FD+ L YA L + GV + +++ ++L G ++
Sbjct: 198 KVRLVNVEAAPTVLPGFDEELVKYAMQYLEEHGVEFRISTPIEECTPNGVVLKGGEKIDS 257
Query: 178 GLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237
+VW+ GV + L++ + ++ GR+ +DE+LR P +D F VGD S G+
Sbjct: 258 ATVVWTGGVRGNPLLEEAGI-ETARGRVKVDEYLRAPGHEDFFVVGDSSLIFNDEGRP-F 315
Query: 238 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 295
P AQ+A +QG++L S N + + GG PF + G++A++GR A+
Sbjct: 316 PPTAQMATQQGQHLSS--NLVAQLRGGSMK---------PFKFESKGTLASLGRGSAI 362
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,598,533,256
Number of Sequences: 23463169
Number of extensions: 239032365
Number of successful extensions: 623274
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3076
Number of HSP's successfully gapped in prelim test: 7961
Number of HSP's that attempted gapping in prelim test: 598741
Number of HSP's gapped (non-prelim): 14259
length of query: 352
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 209
effective length of database: 9,003,962,200
effective search space: 1881828099800
effective search space used: 1881828099800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)