Query 018671
Match_columns 352
No_of_seqs 384 out of 2751
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 04:16:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 9.3E-63 3.2E-67 482.4 25.4 327 16-351 150-500 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 1.8E-40 6.2E-45 319.3 26.1 314 5-350 78-423 (430)
3 4eqs_A Coenzyme A disulfide re 100.0 9.9E-35 3.4E-39 279.8 26.7 209 17-257 98-310 (437)
4 3sx6_A Sulfide-quinone reducta 100.0 2.4E-34 8.2E-39 277.3 26.2 284 14-330 91-406 (437)
5 3h28_A Sulfide-quinone reducta 100.0 4.6E-33 1.6E-37 267.7 24.7 290 15-339 89-403 (430)
6 1xhc_A NADH oxidase /nitrite r 100.0 3.2E-33 1.1E-37 263.4 21.3 207 8-256 86-295 (367)
7 3ef6_A Toluene 1,2-dioxygenase 100.0 3.7E-32 1.3E-36 259.9 21.4 216 7-256 82-307 (410)
8 2gqw_A Ferredoxin reductase; f 100.0 4.1E-32 1.4E-36 259.4 20.3 208 16-257 94-307 (408)
9 3lxd_A FAD-dependent pyridine 100.0 5E-31 1.7E-35 252.4 24.1 208 16-256 100-319 (415)
10 3h8l_A NADH oxidase; membrane 100.0 1.6E-31 5.4E-36 255.3 19.6 210 21-260 99-336 (409)
11 3klj_A NAD(FAD)-dependent dehy 100.0 4.9E-32 1.7E-36 256.7 15.4 204 5-257 85-293 (385)
12 2bc0_A NADH oxidase; flavoprot 100.0 1.2E-30 4.1E-35 255.0 22.8 206 19-256 133-359 (490)
13 3ntd_A FAD-dependent pyridine 100.0 2.2E-30 7.5E-35 257.4 24.9 209 18-256 100-336 (565)
14 3kd9_A Coenzyme A disulfide re 100.0 4.5E-30 1.6E-34 248.2 26.5 206 20-256 99-313 (449)
15 3vrd_B FCCB subunit, flavocyto 100.0 3.1E-31 1.1E-35 252.5 17.9 276 6-321 78-385 (401)
16 3fg2_P Putative rubredoxin red 100.0 1.3E-30 4.5E-35 248.6 21.6 208 15-256 90-308 (404)
17 3iwa_A FAD-dependent pyridine 100.0 2.7E-30 9.2E-35 251.3 21.8 207 20-256 110-327 (472)
18 2cdu_A NADPH oxidase; flavoenz 100.0 2.5E-30 8.4E-35 250.3 21.0 205 19-256 101-315 (452)
19 3cgb_A Pyridine nucleotide-dis 100.0 1.2E-29 4.1E-34 247.2 25.3 206 21-256 138-351 (480)
20 3ics_A Coenzyme A-disulfide re 100.0 1.2E-29 4E-34 253.3 24.6 208 20-257 137-352 (588)
21 2v3a_A Rubredoxin reductase; a 100.0 8E-30 2.7E-34 241.6 21.3 204 14-256 92-304 (384)
22 1q1r_A Putidaredoxin reductase 100.0 5E-30 1.7E-34 246.6 17.8 207 16-256 95-317 (431)
23 3oc4_A Oxidoreductase, pyridin 100.0 9.6E-30 3.3E-34 246.1 19.7 207 16-256 96-312 (452)
24 1nhp_A NADH peroxidase; oxidor 100.0 2.4E-29 8.2E-34 243.0 21.3 204 21-256 101-314 (447)
25 1m6i_A Programmed cell death p 100.0 7.6E-30 2.6E-34 249.3 15.6 213 15-256 124-350 (493)
26 2wpf_A Trypanothione reductase 100.0 3.9E-29 1.3E-33 244.4 20.1 190 19-256 151-353 (495)
27 1onf_A GR, grase, glutathione 100.0 1.5E-28 5E-33 240.7 23.5 198 19-257 137-370 (500)
28 1fec_A Trypanothione reductase 100.0 2.6E-28 8.9E-33 238.3 25.0 190 20-257 148-350 (490)
29 1zmd_A Dihydrolipoyl dehydroge 100.0 8.3E-29 2.8E-33 241.0 21.1 192 20-257 137-344 (474)
30 1ges_A Glutathione reductase; 100.0 4.4E-29 1.5E-33 241.3 18.6 192 18-257 126-327 (450)
31 2hqm_A GR, grase, glutathione 100.0 9.1E-29 3.1E-33 241.0 20.6 189 21-257 146-346 (479)
32 1ebd_A E3BD, dihydrolipoamide 100.0 1.3E-28 4.5E-33 238.3 20.2 190 20-256 130-331 (455)
33 2a8x_A Dihydrolipoyl dehydroge 100.0 1.4E-28 4.9E-33 238.7 19.2 190 20-256 131-332 (464)
34 2qae_A Lipoamide, dihydrolipoy 100.0 2.5E-28 8.4E-33 237.3 20.4 193 20-257 133-339 (468)
35 2r9z_A Glutathione amide reduc 100.0 1.5E-28 5.1E-33 238.4 18.7 191 18-256 125-325 (463)
36 1mo9_A ORF3; nucleotide bindin 100.0 4.7E-28 1.6E-32 238.3 21.9 223 19-294 170-405 (523)
37 3dgz_A Thioredoxin reductase 2 100.0 5.3E-28 1.8E-32 236.1 21.8 192 20-257 144-351 (488)
38 1dxl_A Dihydrolipoamide dehydr 100.0 3.5E-28 1.2E-32 236.3 20.3 191 20-256 136-340 (470)
39 3dk9_A Grase, GR, glutathione 100.0 1.2E-27 4.2E-32 232.9 24.1 197 13-257 138-355 (478)
40 1ojt_A Surface protein; redox- 100.0 2.5E-28 8.7E-33 238.0 18.6 190 20-257 145-348 (482)
41 3dgh_A TRXR-1, thioredoxin red 100.0 9E-28 3.1E-32 234.2 22.3 191 20-257 147-351 (483)
42 1v59_A Dihydrolipoamide dehydr 100.0 4.3E-28 1.5E-32 236.2 19.9 190 22-257 144-349 (478)
43 3l8k_A Dihydrolipoyl dehydroge 100.0 2.6E-28 8.9E-33 237.0 18.1 192 18-257 125-332 (466)
44 4dna_A Probable glutathione re 100.0 2.7E-27 9.2E-32 229.6 24.3 192 17-257 127-330 (463)
45 1xdi_A RV3303C-LPDA; reductase 100.0 6.1E-28 2.1E-32 236.3 19.8 190 21-256 142-340 (499)
46 1zk7_A HGII, reductase, mercur 100.0 2.2E-27 7.4E-32 230.6 23.4 189 20-256 135-332 (467)
47 3qfa_A Thioredoxin reductase 1 100.0 1.8E-27 6E-32 234.0 21.8 192 20-257 170-379 (519)
48 2eq6_A Pyruvate dehydrogenase 100.0 7.8E-28 2.7E-32 233.5 18.5 191 19-256 127-332 (464)
49 2yqu_A 2-oxoglutarate dehydrog 100.0 1.5E-27 5E-32 231.0 20.2 194 18-257 124-326 (455)
50 4b1b_A TRXR, thioredoxin reduc 100.0 1.8E-27 6.1E-32 233.8 20.6 195 17-257 179-383 (542)
51 3f8d_A Thioredoxin reductase ( 100.0 9.7E-28 3.3E-32 220.8 17.6 199 15-261 105-318 (323)
52 3o0h_A Glutathione reductase; 99.9 6.2E-27 2.1E-31 228.3 21.3 192 18-257 149-350 (484)
53 3ic9_A Dihydrolipoamide dehydr 99.9 2.7E-27 9.4E-32 231.2 18.2 193 17-257 130-337 (492)
54 3urh_A Dihydrolipoyl dehydroge 99.9 9.5E-27 3.3E-31 227.4 22.0 192 20-257 155-362 (491)
55 2zbw_A Thioredoxin reductase; 99.9 8.9E-27 3.1E-31 216.0 20.4 196 16-260 102-317 (335)
56 3fbs_A Oxidoreductase; structu 99.9 9.1E-28 3.1E-32 218.5 13.2 194 14-260 91-292 (297)
57 2x8g_A Thioredoxin glutathione 99.9 4.6E-27 1.6E-31 235.0 18.4 192 20-257 246-458 (598)
58 1lvl_A Dihydrolipoamide dehydr 99.9 5.1E-27 1.7E-31 227.4 17.9 188 20-256 131-328 (458)
59 2q7v_A Thioredoxin reductase; 99.9 6.1E-27 2.1E-31 216.5 16.5 197 15-260 103-312 (325)
60 3lad_A Dihydrolipoamide dehydr 99.9 3E-26 1E-30 223.0 22.1 192 20-257 139-342 (476)
61 3cty_A Thioredoxin reductase; 99.9 4.4E-27 1.5E-31 216.8 15.2 196 17-260 108-316 (319)
62 2q0l_A TRXR, thioredoxin reduc 99.9 5.6E-27 1.9E-31 215.1 15.7 194 16-260 95-309 (311)
63 3r9u_A Thioredoxin reductase; 99.9 4.7E-27 1.6E-31 215.5 14.3 199 15-260 99-312 (315)
64 1trb_A Thioredoxin reductase; 99.9 8.4E-27 2.9E-31 214.7 15.5 200 16-260 97-314 (320)
65 1fl2_A Alkyl hydroperoxide red 99.9 2.1E-26 7.3E-31 211.2 17.1 197 16-260 96-305 (310)
66 3lzw_A Ferredoxin--NADP reduct 99.9 8.1E-27 2.8E-31 215.6 14.2 197 14-260 102-315 (332)
67 4gcm_A TRXR, thioredoxin reduc 99.9 8.3E-27 2.8E-31 214.4 13.5 199 11-260 92-306 (312)
68 4fk1_A Putative thioredoxin re 99.9 2.1E-26 7.3E-31 211.1 14.4 199 13-260 95-300 (304)
69 3itj_A Thioredoxin reductase 1 99.9 3.6E-26 1.2E-30 211.7 14.4 196 18-260 125-335 (338)
70 1vdc_A NTR, NADPH dependent th 99.9 9.8E-26 3.3E-30 208.9 17.0 201 17-260 106-323 (333)
71 3ab1_A Ferredoxin--NADP reduct 99.9 1.1E-25 3.8E-30 211.0 16.9 197 15-260 111-328 (360)
72 2a87_A TRXR, TR, thioredoxin r 99.9 1.1E-25 3.9E-30 208.9 15.6 197 16-260 107-316 (335)
73 4a5l_A Thioredoxin reductase; 99.9 6.6E-26 2.3E-30 208.2 13.8 200 13-260 99-312 (314)
74 4a9w_A Monooxygenase; baeyer-v 99.9 2E-25 6.7E-30 208.0 15.2 198 15-260 112-352 (357)
75 3d1c_A Flavin-containing putat 99.9 1.6E-25 5.5E-30 210.2 14.2 202 14-260 122-339 (369)
76 1hyu_A AHPF, alkyl hydroperoxi 99.9 5.1E-24 1.7E-28 209.4 18.4 196 16-260 307-516 (521)
77 2vdc_G Glutamate synthase [NAD 99.9 4.9E-24 1.7E-28 205.8 16.6 207 20-260 204-444 (456)
78 2ywl_A Thioredoxin reductase r 99.9 2.5E-23 8.4E-28 175.9 17.7 150 85-260 3-171 (180)
79 2xve_A Flavin-containing monoo 99.9 1.6E-23 5.5E-28 203.0 13.8 176 20-256 151-337 (464)
80 1lqt_A FPRA; NADP+ derivative, 99.9 7.8E-23 2.7E-27 197.5 13.1 220 20-260 93-387 (456)
81 1cjc_A Protein (adrenodoxin re 99.9 1.7E-22 5.7E-27 195.4 13.5 219 20-260 91-395 (460)
82 1o94_A Tmadh, trimethylamine d 99.9 1.5E-22 5.1E-27 206.3 11.5 189 18-259 474-699 (729)
83 1gte_A Dihydropyrimidine dehyd 99.9 3.2E-21 1.1E-25 202.9 19.0 209 19-260 271-508 (1025)
84 3s5w_A L-ornithine 5-monooxyge 99.9 1.6E-21 5.4E-26 188.9 13.4 203 21-259 178-448 (463)
85 2gv8_A Monooxygenase; FMO, FAD 99.9 7.7E-22 2.6E-26 190.4 8.9 176 21-257 163-359 (447)
86 3k30_A Histamine dehydrogenase 99.8 1.7E-21 5.7E-26 197.6 9.4 185 19-260 472-675 (690)
87 2gag_A Heterotetrameric sarcos 99.8 2.6E-21 8.9E-26 202.4 9.9 184 20-260 238-444 (965)
88 3gwf_A Cyclohexanone monooxyge 99.8 4.3E-20 1.5E-24 181.8 12.5 202 15-260 127-457 (540)
89 1ps9_A 2,4-dienoyl-COA reducta 99.8 7.6E-20 2.6E-24 185.0 12.9 188 21-255 452-671 (671)
90 1y56_A Hypothetical protein PH 99.8 1.7E-19 5.8E-24 176.0 12.6 163 20-259 204-376 (493)
91 3uox_A Otemo; baeyer-villiger 99.8 9.7E-19 3.3E-23 172.4 12.6 212 14-260 126-466 (545)
92 4ap3_A Steroid monooxygenase; 99.7 1.4E-17 4.6E-22 164.4 16.2 204 14-260 138-471 (549)
93 1w4x_A Phenylacetone monooxyge 99.7 2.3E-17 7.8E-22 162.8 15.2 101 151-260 352-466 (542)
94 2cul_A Glucose-inhibited divis 99.7 1.1E-16 3.8E-21 140.7 13.1 151 85-259 5-231 (232)
95 4b63_A L-ornithine N5 monooxyg 99.4 1.2E-12 4.2E-17 127.6 16.1 206 17-254 196-482 (501)
96 1rp0_A ARA6, thiazole biosynth 99.2 3.5E-11 1.2E-15 108.7 10.8 159 85-260 41-275 (284)
97 2bry_A NEDD9 interacting prote 99.0 4.7E-10 1.6E-14 109.2 5.7 146 23-189 37-231 (497)
98 3klj_A NAD(FAD)-dependent dehy 98.8 1.3E-08 4.5E-13 95.8 10.7 92 84-189 10-117 (385)
99 3hyw_A Sulfide-quinone reducta 98.8 1.7E-09 5.7E-14 103.4 4.1 94 84-189 3-110 (430)
100 3vrd_B FCCB subunit, flavocyto 98.8 8.4E-09 2.9E-13 97.4 7.5 95 83-189 2-109 (401)
101 3sx6_A Sulfide-quinone reducta 98.7 1.8E-08 6.2E-13 96.4 8.5 95 84-189 5-113 (437)
102 3fbs_A Oxidoreductase; structu 98.7 4.1E-08 1.4E-12 88.2 10.1 91 85-189 4-113 (297)
103 4a9w_A Monooxygenase; baeyer-v 98.7 5.4E-08 1.8E-12 89.7 10.7 90 85-189 5-133 (357)
104 2q7v_A Thioredoxin reductase; 98.7 1.2E-07 4E-12 86.7 11.3 92 84-189 9-124 (325)
105 3f8d_A Thioredoxin reductase ( 98.7 1E-07 3.4E-12 86.7 10.5 92 84-189 16-126 (323)
106 3itj_A Thioredoxin reductase 1 98.6 7.2E-08 2.5E-12 88.2 9.2 93 83-189 22-143 (338)
107 2q0l_A TRXR, thioredoxin reduc 98.6 1.5E-07 5.3E-12 85.2 10.7 91 85-189 3-115 (311)
108 3r9u_A Thioredoxin reductase; 98.6 1.6E-07 5.5E-12 85.0 10.6 92 84-189 5-119 (315)
109 2e5v_A L-aspartate oxidase; ar 98.6 4.4E-10 1.5E-14 108.7 -6.9 195 18-256 159-365 (472)
110 1q1r_A Putidaredoxin reductase 98.6 8.3E-08 2.8E-12 91.6 8.9 94 84-189 5-115 (431)
111 3ef6_A Toluene 1,2-dioxygenase 98.6 1.6E-07 5.4E-12 89.1 10.7 94 84-189 3-112 (410)
112 3lzw_A Ferredoxin--NADP reduct 98.6 8E-08 2.7E-12 87.7 8.1 88 84-186 8-121 (332)
113 3alj_A 2-methyl-3-hydroxypyrid 98.6 5.8E-07 2E-11 84.0 13.7 92 84-189 12-161 (379)
114 3h8l_A NADH oxidase; membrane 98.6 3.6E-08 1.2E-12 93.4 5.1 95 84-189 2-114 (409)
115 2zbw_A Thioredoxin reductase; 98.6 3.7E-07 1.3E-11 83.6 11.2 91 84-188 6-121 (335)
116 1fl2_A Alkyl hydroperoxide red 98.5 2.4E-07 8.2E-12 83.9 9.7 91 85-189 3-116 (310)
117 3ab1_A Ferredoxin--NADP reduct 98.5 6E-07 2E-11 83.2 12.6 90 84-187 15-130 (360)
118 3fg2_P Putative rubredoxin red 98.5 1.7E-07 5.7E-12 88.7 8.4 94 84-189 2-111 (404)
119 3nlc_A Uncharacterized protein 98.5 4.3E-07 1.5E-11 89.0 11.1 102 84-199 108-291 (549)
120 3h28_A Sulfide-quinone reducta 98.5 6E-08 2.1E-12 92.5 4.9 94 84-189 3-110 (430)
121 3lxd_A FAD-dependent pyridine 98.5 2.3E-07 7.8E-12 88.0 8.7 94 84-189 10-120 (415)
122 4fk1_A Putative thioredoxin re 98.5 5.1E-07 1.8E-11 81.8 10.3 91 85-189 8-118 (304)
123 2gqw_A Ferredoxin reductase; f 98.5 3.2E-07 1.1E-11 86.9 9.1 94 84-189 8-114 (408)
124 2a87_A TRXR, TR, thioredoxin r 98.5 6E-07 2E-11 82.4 10.7 92 84-189 15-127 (335)
125 3d1c_A Flavin-containing putat 98.5 7.2E-07 2.5E-11 82.7 11.3 91 85-190 6-145 (369)
126 4a5l_A Thioredoxin reductase; 98.4 8E-07 2.7E-11 80.5 10.4 91 85-189 6-122 (314)
127 3v76_A Flavoprotein; structura 98.4 7.9E-07 2.7E-11 84.4 10.6 90 84-188 28-187 (417)
128 1xhc_A NADH oxidase /nitrite r 98.4 5.7E-07 1.9E-11 84.0 9.5 90 84-189 9-114 (367)
129 3cty_A Thioredoxin reductase; 98.4 7.2E-07 2.5E-11 81.2 9.9 91 84-189 17-127 (319)
130 1trb_A Thioredoxin reductase; 98.4 9.3E-07 3.2E-11 80.3 10.6 92 84-189 6-117 (320)
131 1vdc_A NTR, NADPH dependent th 98.4 6E-07 2.1E-11 82.1 9.2 91 84-189 9-125 (333)
132 3kd9_A Coenzyme A disulfide re 98.4 6E-07 2E-11 86.1 9.0 94 84-189 4-115 (449)
133 1hyu_A AHPF, alkyl hydroperoxi 98.4 1E-06 3.5E-11 86.1 10.7 92 84-189 213-327 (521)
134 2gqf_A Hypothetical protein HI 98.4 2.1E-06 7.2E-11 81.1 11.7 90 85-189 6-169 (401)
135 4ap3_A Steroid monooxygenase; 98.4 4.1E-06 1.4E-10 82.3 14.0 89 84-186 22-157 (549)
136 4gcm_A TRXR, thioredoxin reduc 98.4 2.5E-06 8.4E-11 77.4 11.2 91 85-189 8-117 (312)
137 3oc4_A Oxidoreductase, pyridin 98.3 1.5E-06 5.3E-11 83.3 10.1 94 84-189 3-116 (452)
138 2r9z_A Glutathione amide reduc 98.3 1.4E-06 4.9E-11 83.8 9.9 91 84-189 5-143 (463)
139 2xve_A Flavin-containing monoo 98.3 3E-06 1E-10 81.6 11.5 92 84-189 3-169 (464)
140 1ges_A Glutathione reductase; 98.3 1.5E-06 5E-11 83.4 9.3 91 84-189 5-144 (450)
141 3o0h_A Glutathione reductase; 98.3 1.9E-06 6.5E-11 83.4 10.1 92 84-189 27-167 (484)
142 1lvl_A Dihydrolipoamide dehydr 98.3 4.4E-06 1.5E-10 80.3 12.3 91 84-189 6-147 (458)
143 4eqs_A Coenzyme A disulfide re 98.3 2.5E-06 8.5E-11 81.5 10.3 93 85-189 2-117 (437)
144 3gwf_A Cyclohexanone monooxyge 98.3 2.8E-06 9.7E-11 83.3 10.8 89 84-186 9-145 (540)
145 2x3n_A Probable FAD-dependent 98.3 3E-06 1E-10 79.7 10.6 91 85-189 8-167 (399)
146 1m6i_A Programmed cell death p 98.3 8E-07 2.7E-11 86.3 6.5 94 84-189 12-145 (493)
147 3iwa_A FAD-dependent pyridine 98.3 1.8E-06 6.2E-11 83.2 8.9 94 84-189 4-126 (472)
148 2cdu_A NADPH oxidase; flavoenz 98.3 3.6E-06 1.2E-10 80.6 11.0 93 85-189 2-118 (452)
149 3s5w_A L-ornithine 5-monooxyge 98.3 2.1E-06 7.1E-11 82.5 9.3 96 85-189 32-193 (463)
150 1nhp_A NADH peroxidase; oxidor 98.3 1.5E-06 5.1E-11 83.3 8.0 93 85-189 2-116 (447)
151 1onf_A GR, grase, glutathione 98.3 9.2E-07 3.2E-11 86.0 6.6 91 85-189 4-154 (500)
152 3jsk_A Cypbp37 protein; octame 98.3 1.9E-05 6.4E-10 72.5 14.7 159 84-260 80-335 (344)
153 3ntd_A FAD-dependent pyridine 98.3 3.4E-06 1.2E-10 83.1 10.5 94 84-189 2-118 (565)
154 2vdc_G Glutamate synthase [NAD 98.2 8.7E-07 3E-11 85.1 5.9 89 81-188 120-219 (456)
155 2gv8_A Monooxygenase; FMO, FAD 98.2 2.5E-06 8.7E-11 81.6 9.2 89 84-186 7-175 (447)
156 4g6h_A Rotenone-insensitive NA 98.2 9.4E-07 3.2E-11 86.0 6.2 93 84-190 43-171 (502)
157 3oz2_A Digeranylgeranylglycero 98.2 1.5E-05 5.2E-10 74.1 14.3 41 216-260 276-316 (397)
158 2i0z_A NAD(FAD)-utilizing dehy 98.2 9.2E-06 3.1E-10 77.8 12.9 91 84-188 27-191 (447)
159 2eq6_A Pyruvate dehydrogenase 98.2 5.1E-06 1.7E-10 79.9 11.0 91 84-189 7-144 (464)
160 3uox_A Otemo; baeyer-villiger 98.2 3.7E-06 1.3E-10 82.5 10.2 92 84-189 10-150 (545)
161 4dna_A Probable glutathione re 98.2 1.8E-06 6.2E-11 83.0 7.7 91 85-189 7-146 (463)
162 1zk7_A HGII, reductase, mercur 98.2 6.4E-06 2.2E-10 79.2 11.2 92 84-189 5-151 (467)
163 3ics_A Coenzyme A-disulfide re 98.2 7.5E-06 2.6E-10 81.2 11.9 96 82-189 35-153 (588)
164 1fec_A Trypanothione reductase 98.2 4.1E-06 1.4E-10 81.2 9.6 91 85-189 5-164 (490)
165 3cgb_A Pyridine nucleotide-dis 98.2 7.4E-06 2.5E-10 79.1 11.4 94 84-189 37-153 (480)
166 1dxl_A Dihydrolipoamide dehydr 98.2 9.3E-06 3.2E-10 78.1 12.0 92 84-189 7-152 (470)
167 1ryi_A Glycine oxidase; flavop 98.2 6.9E-06 2.4E-10 76.5 10.5 59 137-196 164-227 (382)
168 3l8k_A Dihydrolipoyl dehydroge 98.2 3.2E-06 1.1E-10 81.4 8.3 91 85-189 6-145 (466)
169 3fpz_A Thiazole biosynthetic e 98.2 6.8E-07 2.3E-11 81.9 3.3 54 204-260 272-325 (326)
170 1mo9_A ORF3; nucleotide bindin 98.2 7.7E-06 2.6E-10 79.9 11.0 91 84-189 44-187 (523)
171 1ebd_A E3BD, dihydrolipoamide 98.2 6.7E-06 2.3E-10 78.8 10.3 92 84-189 4-146 (455)
172 2yqu_A 2-oxoglutarate dehydrog 98.2 4.2E-06 1.4E-10 80.3 8.7 91 85-189 3-142 (455)
173 2bc0_A NADH oxidase; flavoprot 98.2 1.1E-05 3.7E-10 78.2 11.6 95 84-189 36-150 (490)
174 2wpf_A Trypanothione reductase 98.2 3.9E-06 1.3E-10 81.5 8.3 92 84-189 8-168 (495)
175 1zmd_A Dihydrolipoyl dehydroge 98.1 7.6E-06 2.6E-10 78.9 10.2 92 84-189 7-153 (474)
176 2vou_A 2,6-dihydroxypyridine h 98.1 9.3E-06 3.2E-10 76.3 9.9 92 84-189 6-154 (397)
177 2qae_A Lipoamide, dihydrolipoy 98.1 7.9E-06 2.7E-10 78.6 9.4 91 85-189 4-149 (468)
178 3nix_A Flavoprotein/dehydrogen 98.1 1E-05 3.5E-10 76.4 10.0 90 85-188 7-166 (421)
179 2hqm_A GR, grase, glutathione 98.1 4.6E-06 1.6E-10 80.6 7.7 92 84-189 12-161 (479)
180 2gjc_A Thiazole biosynthetic e 98.1 3.5E-05 1.2E-09 70.3 13.1 159 85-259 67-324 (326)
181 3ces_A MNMG, tRNA uridine 5-ca 98.1 1.5E-05 5.1E-10 79.1 11.2 91 85-189 30-182 (651)
182 1y56_B Sarcosine oxidase; dehy 98.1 1.7E-05 5.9E-10 73.8 11.3 57 139-196 151-213 (382)
183 3dme_A Conserved exported prot 98.1 1.8E-05 6.2E-10 72.9 11.1 59 139-197 152-219 (369)
184 1k0i_A P-hydroxybenzoate hydro 98.1 2.2E-05 7.5E-10 73.5 11.7 91 85-189 4-164 (394)
185 1xdi_A RV3303C-LPDA; reductase 98.1 1.2E-05 3.9E-10 78.2 10.1 91 85-189 4-157 (499)
186 1yvv_A Amine oxidase, flavin-c 98.1 2.5E-05 8.5E-10 71.2 11.8 89 85-188 4-162 (336)
187 3urh_A Dihydrolipoyl dehydroge 98.1 1.3E-05 4.5E-10 77.6 10.3 92 84-189 26-171 (491)
188 2zxi_A TRNA uridine 5-carboxym 98.1 2.5E-05 8.7E-10 77.2 12.2 92 84-189 28-181 (637)
189 3rp8_A Flavoprotein monooxygen 98.0 2.7E-05 9.3E-10 73.3 11.1 91 83-189 23-182 (407)
190 1gte_A Dihydropyrimidine dehyd 98.0 2.6E-06 8.8E-11 89.8 4.2 91 82-189 186-289 (1025)
191 1cjc_A Protein (adrenodoxin re 98.0 4.2E-06 1.4E-10 80.4 5.4 88 84-188 7-106 (460)
192 1y0p_A Fumarate reductase flav 98.0 4.3E-05 1.5E-09 75.5 12.7 52 138-189 256-318 (571)
193 3dk9_A Grase, GR, glutathione 98.0 1.2E-05 4.3E-10 77.5 8.6 91 84-189 21-161 (478)
194 1lqt_A FPRA; NADP+ derivative, 98.0 2.7E-06 9.1E-11 81.8 3.8 92 84-188 4-108 (456)
195 2gag_B Heterotetrameric sarcos 98.0 2.4E-05 8.2E-10 73.3 10.3 58 138-196 175-238 (405)
196 3cp8_A TRNA uridine 5-carboxym 98.0 2.7E-05 9.3E-10 77.2 10.8 92 84-189 22-175 (641)
197 2a8x_A Dihydrolipoyl dehydroge 98.0 1.2E-05 3.9E-10 77.4 7.9 91 85-189 5-147 (464)
198 3i3l_A Alkylhalidase CMLS; fla 98.0 5.3E-05 1.8E-09 75.0 12.6 92 84-189 24-189 (591)
199 1w4x_A Phenylacetone monooxyge 98.0 2.5E-05 8.6E-10 76.6 10.1 92 84-189 17-155 (542)
200 2gf3_A MSOX, monomeric sarcosi 98.0 5.4E-05 1.9E-09 70.5 11.9 59 137-196 150-213 (389)
201 1ojt_A Surface protein; redox- 98.0 2E-05 6.7E-10 76.2 9.0 91 85-189 8-161 (482)
202 2uzz_A N-methyl-L-tryptophan o 98.0 4.1E-05 1.4E-09 70.9 10.8 56 138-194 150-210 (372)
203 2v3a_A Rubredoxin reductase; a 97.9 9.1E-06 3.1E-10 76.1 6.1 93 84-189 5-114 (384)
204 3lad_A Dihydrolipoamide dehydr 97.9 2.7E-05 9.1E-10 75.1 9.4 92 84-189 4-155 (476)
205 3cgv_A Geranylgeranyl reductas 97.9 5.9E-05 2E-09 70.4 10.8 90 85-188 6-162 (397)
206 3qfa_A Thioredoxin reductase 1 97.9 6.6E-05 2.3E-09 73.2 11.5 92 84-189 33-186 (519)
207 3fmw_A Oxygenase; mithramycin, 97.9 6.1E-05 2.1E-09 74.3 11.1 91 85-189 51-208 (570)
208 3ps9_A TRNA 5-methylaminomethy 97.9 8.8E-05 3E-09 74.7 12.5 56 142-197 422-482 (676)
209 2gqf_A Hypothetical protein HI 97.9 2.4E-06 8.2E-11 80.7 0.8 46 207-256 353-399 (401)
210 1qo8_A Flavocytochrome C3 fuma 97.9 6.6E-05 2.2E-09 74.0 11.2 51 139-189 252-313 (566)
211 3qj4_A Renalase; FAD/NAD(P)-bi 97.9 3E-05 1E-09 71.1 8.2 37 150-186 122-163 (342)
212 1v59_A Dihydrolipoamide dehydr 97.9 2.9E-05 9.9E-10 74.9 8.2 92 84-189 6-158 (478)
213 2xdo_A TETX2 protein; tetracyc 97.8 5.8E-05 2E-09 70.8 9.6 92 84-189 27-183 (398)
214 2x8g_A Thioredoxin glutathione 97.8 0.0001 3.5E-09 73.1 11.7 92 84-189 108-262 (598)
215 3atr_A Conserved archaeal prot 97.8 3.4E-05 1.2E-09 73.9 7.8 92 84-189 7-163 (453)
216 2qa2_A CABE, polyketide oxygen 97.8 0.00019 6.6E-09 69.5 12.9 92 84-189 13-167 (499)
217 3dgz_A Thioredoxin reductase 2 97.8 6E-05 2E-09 72.9 9.2 91 85-189 8-160 (488)
218 2aqj_A Tryptophan halogenase, 97.8 0.00018 6.3E-09 70.3 12.7 49 141-189 169-223 (538)
219 3e1t_A Halogenase; flavoprotei 97.8 0.00012 4.1E-09 71.2 11.4 52 138-189 112-173 (512)
220 3k30_A Histamine dehydrogenase 97.8 1.2E-05 4E-10 81.4 4.2 86 82-189 390-489 (690)
221 3dgh_A TRXR-1, thioredoxin red 97.8 9.4E-05 3.2E-09 71.4 10.4 92 84-189 10-163 (483)
222 3c4n_A Uncharacterized protein 97.8 7E-05 2.4E-09 70.6 9.2 58 139-197 174-246 (405)
223 3ic9_A Dihydrolipoamide dehydr 97.8 7.1E-05 2.4E-09 72.5 9.3 91 85-189 10-149 (492)
224 2oln_A NIKD protein; flavoprot 97.8 0.00021 7.1E-09 66.8 12.3 56 140-196 156-216 (397)
225 4hb9_A Similarities with proba 97.8 7.4E-05 2.5E-09 69.9 9.2 92 84-189 2-167 (412)
226 1ps9_A 2,4-dienoyl-COA reducta 97.8 2.8E-05 9.5E-10 78.3 6.6 82 83-189 373-468 (671)
227 2qa1_A PGAE, polyketide oxygen 97.8 0.00018 6.1E-09 69.8 12.0 92 84-189 12-166 (500)
228 1d4d_A Flavocytochrome C fumar 97.7 0.00015 5.2E-09 71.5 11.4 52 138-189 256-318 (572)
229 3pvc_A TRNA 5-methylaminomethy 97.7 0.00019 6.6E-09 72.4 11.8 56 142-197 417-478 (689)
230 3ihg_A RDME; flavoenzyme, anth 97.7 0.00017 6E-09 70.4 11.2 52 137-188 120-183 (535)
231 2gmh_A Electron transfer flavo 97.7 0.00022 7.4E-09 70.6 11.8 52 138-189 145-218 (584)
232 3nyc_A D-arginine dehydrogenas 97.6 0.00012 4.3E-09 67.7 8.7 57 139-196 156-217 (381)
233 3c96_A Flavin-containing monoo 97.6 0.00022 7.6E-09 67.1 10.3 92 84-189 5-170 (410)
234 1pj5_A N,N-dimethylglycine oxi 97.6 0.00026 8.8E-09 73.0 11.3 57 139-196 153-215 (830)
235 2gag_A Heterotetrameric sarcos 97.6 0.00013 4.4E-09 76.4 8.5 92 84-189 129-254 (965)
236 1o94_A Tmadh, trimethylamine d 97.6 2.3E-05 7.9E-10 79.6 2.8 86 83-189 389-492 (729)
237 3c4a_A Probable tryptophan hyd 97.5 7.4E-05 2.5E-09 69.7 5.2 83 85-188 2-143 (381)
238 1y56_A Hypothetical protein PH 97.5 5.5E-05 1.9E-09 73.3 3.7 90 84-189 109-220 (493)
239 3dje_A Fructosyl amine: oxygen 97.4 0.00074 2.5E-08 63.9 11.2 55 138-192 162-225 (438)
240 2qcu_A Aerobic glycerol-3-phos 97.4 0.00072 2.5E-08 65.5 10.8 56 138-193 150-215 (501)
241 2e4g_A Tryptophan halogenase; 97.4 0.0013 4.6E-08 64.4 12.8 52 138-189 195-253 (550)
242 4b1b_A TRXR, thioredoxin reduc 97.4 0.00084 2.9E-08 65.7 11.0 91 85-189 44-198 (542)
243 4at0_A 3-ketosteroid-delta4-5a 97.3 0.001 3.6E-08 64.5 11.0 51 138-188 203-264 (510)
244 2pyx_A Tryptophan halogenase; 97.3 0.0011 3.6E-08 64.7 11.0 50 140-189 178-234 (526)
245 2weu_A Tryptophan 5-halogenase 97.3 0.0016 5.6E-08 63.0 12.2 52 138-189 174-231 (511)
246 2e5v_A L-aspartate oxidase; ar 97.3 0.001 3.4E-08 64.0 10.0 49 140-189 122-177 (472)
247 3da1_A Glycerol-3-phosphate de 97.2 0.00088 3E-08 65.9 9.3 58 139-196 172-240 (561)
248 2dkh_A 3-hydroxybenzoate hydro 97.1 0.0011 3.7E-08 66.3 8.8 53 137-189 141-212 (639)
249 2r0c_A REBC; flavin adenine di 97.0 0.0037 1.3E-07 61.2 11.1 49 138-189 139-197 (549)
250 4b63_A L-ornithine N5 monooxyg 96.9 0.0021 7.3E-08 62.2 8.7 105 85-189 41-215 (501)
251 3kkj_A Amine oxidase, flavin-c 96.7 0.0012 4.2E-08 56.9 4.2 31 85-129 4-34 (336)
252 3k7m_X 6-hydroxy-L-nicotine ox 96.6 0.00097 3.3E-08 62.9 3.6 85 139-226 206-306 (431)
253 2rgh_A Alpha-glycerophosphate 96.6 0.011 3.9E-07 58.0 10.9 55 140-194 191-256 (571)
254 1pn0_A Phenol 2-monooxygenase; 96.6 0.0092 3.2E-07 59.8 10.3 20 85-104 10-29 (665)
255 1kf6_A Fumarate reductase flav 96.5 0.012 4E-07 58.3 10.1 50 139-188 136-197 (602)
256 2wdq_A Succinate dehydrogenase 96.4 0.025 8.6E-07 55.8 12.4 51 139-189 145-207 (588)
257 4gut_A Lysine-specific histone 96.3 0.03 1E-06 57.1 12.4 37 150-186 542-583 (776)
258 1chu_A Protein (L-aspartate ox 96.3 0.0084 2.9E-07 58.5 7.7 30 85-129 10-39 (540)
259 2h88_A Succinate dehydrogenase 95.9 0.036 1.2E-06 55.0 10.4 50 140-189 158-218 (621)
260 4dgk_A Phytoene dehydrogenase; 95.8 0.0055 1.9E-07 58.9 3.9 41 147-187 231-277 (501)
261 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.0096 3.3E-07 51.0 3.8 106 83-226 31-141 (223)
262 3eag_A UDP-N-acetylmuramate:L- 95.4 0.03 1E-06 50.8 7.1 74 83-189 4-79 (326)
263 3ihm_A Styrene monooxygenase A 95.1 0.016 5.4E-07 54.8 4.4 32 84-129 23-54 (430)
264 3lk7_A UDP-N-acetylmuramoylala 95.1 0.025 8.4E-07 53.9 5.6 77 83-189 9-85 (451)
265 2iid_A L-amino-acid oxidase; f 94.8 0.034 1.2E-06 53.3 5.9 33 83-129 33-65 (498)
266 3nrn_A Uncharacterized protein 94.7 0.026 8.9E-07 52.9 4.8 44 146-189 198-244 (421)
267 3ka7_A Oxidoreductase; structu 94.6 0.028 9.7E-07 52.5 4.6 45 145-189 204-253 (425)
268 1c0p_A D-amino acid oxidase; a 94.4 0.039 1.3E-06 50.5 5.2 32 84-129 7-38 (363)
269 3g5s_A Methylenetetrahydrofola 94.3 0.036 1.2E-06 51.6 4.5 32 84-129 2-33 (443)
270 2e1m_A L-glutamate oxidase; L- 94.0 0.047 1.6E-06 50.6 4.8 34 82-129 43-76 (376)
271 3nks_A Protoporphyrinogen oxid 94.0 0.035 1.2E-06 52.8 4.0 32 84-129 3-36 (477)
272 4gde_A UDP-galactopyranose mut 94.0 0.042 1.4E-06 52.7 4.5 38 149-186 234-274 (513)
273 3k7m_X 6-hydroxy-L-nicotine ox 93.8 0.045 1.5E-06 51.3 4.3 31 85-129 3-33 (431)
274 2jae_A L-amino acid oxidase; o 93.6 0.062 2.1E-06 51.4 5.0 32 84-129 12-43 (489)
275 1s3e_A Amine oxidase [flavin-c 93.5 0.058 2E-06 52.1 4.5 37 151-187 226-267 (520)
276 3g3e_A D-amino-acid oxidase; F 93.2 0.088 3E-06 47.8 5.1 37 85-129 2-38 (351)
277 2bcg_G Secretory pathway GDP d 93.2 0.068 2.3E-06 50.8 4.4 33 84-130 12-44 (453)
278 4dgk_A Phytoene dehydrogenase; 93.1 0.14 4.9E-06 48.9 6.7 9 305-313 458-466 (501)
279 3kkj_A Amine oxidase, flavin-c 93.1 0.095 3.2E-06 44.6 4.9 36 215-260 293-328 (336)
280 3i83_A 2-dehydropantoate 2-red 93.1 0.33 1.1E-05 43.6 8.7 83 84-195 3-91 (320)
281 2g1u_A Hypothetical protein TM 93.0 0.13 4.5E-06 40.9 5.2 34 82-129 18-51 (155)
282 2yg5_A Putrescine oxidase; oxi 92.6 0.084 2.9E-06 49.8 4.1 32 84-129 6-37 (453)
283 2ivd_A PPO, PPOX, protoporphyr 92.6 0.077 2.6E-06 50.4 3.9 32 84-129 17-48 (478)
284 1sez_A Protoporphyrinogen oxid 92.3 0.1 3.5E-06 50.0 4.4 32 84-129 14-45 (504)
285 1v0j_A UDP-galactopyranose mut 92.3 0.11 3.8E-06 48.4 4.4 32 84-129 8-40 (399)
286 2bi7_A UDP-galactopyranose mut 92.3 0.12 4E-06 48.0 4.6 32 84-129 4-35 (384)
287 3i6d_A Protoporphyrinogen oxid 92.2 0.1 3.6E-06 49.2 4.2 36 152-187 248-288 (470)
288 3nlc_A Uncharacterized protein 92.0 0.12 4E-06 50.5 4.4 48 204-260 496-543 (549)
289 3hdq_A UDP-galactopyranose mut 92.0 0.11 3.9E-06 48.4 4.1 32 84-129 30-61 (397)
290 4hv4_A UDP-N-acetylmuramate--L 92.0 0.17 5.9E-06 48.6 5.5 72 82-189 21-94 (494)
291 1pjq_A CYSG, siroheme synthase 91.9 0.18 6E-06 48.1 5.3 73 83-188 12-84 (457)
292 2b9w_A Putative aminooxidase; 91.7 0.16 5.4E-06 47.4 4.8 33 84-129 7-39 (424)
293 2vvm_A Monoamine oxidase N; FA 91.6 0.12 4E-06 49.5 3.9 39 149-187 267-311 (495)
294 2z3y_A Lysine-specific histone 91.4 0.17 5.7E-06 50.6 4.9 35 81-129 105-139 (662)
295 1i8t_A UDP-galactopyranose mut 91.4 0.12 4.3E-06 47.5 3.7 31 85-129 3-33 (367)
296 3lov_A Protoporphyrinogen oxid 91.3 0.17 6E-06 47.9 4.7 34 84-129 5-38 (475)
297 2xag_A Lysine-specific histone 91.3 0.22 7.6E-06 51.1 5.7 34 82-129 277-310 (852)
298 3nrn_A Uncharacterized protein 91.2 0.52 1.8E-05 43.8 7.8 9 163-171 231-239 (421)
299 1id1_A Putative potassium chan 91.1 0.25 8.4E-06 39.1 4.8 80 84-188 4-83 (153)
300 3pl8_A Pyranose 2-oxidase; sub 91.1 0.2 7E-06 49.6 5.1 34 85-132 48-81 (623)
301 3axb_A Putative oxidoreductase 91.1 0.17 5.9E-06 47.6 4.4 52 144-196 188-262 (448)
302 1lss_A TRK system potassium up 91.1 0.28 9.6E-06 37.7 5.0 31 84-128 5-35 (140)
303 3ego_A Probable 2-dehydropanto 90.9 0.37 1.3E-05 43.1 6.2 77 84-188 3-79 (307)
304 3axb_A Putative oxidoreductase 90.9 0.38 1.3E-05 45.2 6.6 10 23-32 23-32 (448)
305 3llv_A Exopolyphosphatase-rela 90.7 0.28 9.5E-06 38.1 4.7 74 84-186 7-80 (141)
306 3hn2_A 2-dehydropantoate 2-red 90.4 0.27 9.2E-06 44.1 4.9 76 85-189 4-82 (312)
307 3fwz_A Inner membrane protein 90.1 0.33 1.1E-05 37.8 4.6 76 84-188 8-83 (140)
308 1kf6_A Fumarate reductase flav 90.1 0.3 1E-05 48.2 5.3 56 202-259 359-415 (602)
309 1kyq_A Met8P, siroheme biosynt 89.9 0.21 7.2E-06 44.0 3.5 33 83-129 13-45 (274)
310 1rsg_A FMS1 protein; FAD bindi 89.6 0.23 8E-06 47.8 4.0 34 153-186 216-255 (516)
311 3hwr_A 2-dehydropantoate 2-red 89.5 0.67 2.3E-05 41.6 6.7 79 84-189 20-99 (318)
312 1d5t_A Guanine nucleotide diss 89.2 0.38 1.3E-05 45.2 5.0 32 84-129 7-38 (433)
313 3hn7_A UDP-N-acetylmuramate-L- 89.1 0.92 3.2E-05 43.8 7.8 72 84-189 20-93 (524)
314 1b37_A Protein (polyamine oxid 89.0 0.3 1E-05 46.4 4.2 36 151-186 228-268 (472)
315 3ghy_A Ketopantoate reductase 88.9 1 3.4E-05 40.7 7.5 76 84-187 4-81 (335)
316 2hmt_A YUAA protein; RCK, KTN, 88.8 0.39 1.3E-05 37.0 4.1 32 84-129 7-38 (144)
317 2bs2_A Quinol-fumarate reducta 88.7 0.28 9.5E-06 49.0 3.8 31 85-129 7-37 (660)
318 3gyx_A Adenylylsulfate reducta 88.5 0.36 1.2E-05 48.2 4.5 31 85-129 24-60 (662)
319 3p1w_A Rabgdi protein; GDI RAB 88.5 0.39 1.3E-05 45.9 4.5 33 84-130 21-53 (475)
320 3t37_A Probable dehydrogenase; 88.2 0.27 9.2E-06 47.4 3.3 32 85-129 19-50 (526)
321 3c85_A Putative glutathione-re 88.2 0.52 1.8E-05 38.4 4.6 76 83-187 39-116 (183)
322 2vvm_A Monoamine oxidase N; FA 87.9 0.9 3.1E-05 43.2 6.8 9 24-32 40-48 (495)
323 4dsg_A UDP-galactopyranose mut 87.9 0.44 1.5E-05 45.5 4.6 33 84-129 10-42 (484)
324 1kdg_A CDH, cellobiose dehydro 87.7 0.39 1.3E-05 46.6 4.1 48 150-197 209-271 (546)
325 3ka7_A Oxidoreductase; structu 87.6 1 3.4E-05 41.7 6.8 9 163-171 240-248 (425)
326 3p1w_A Rabgdi protein; GDI RAB 87.6 0.79 2.7E-05 43.7 6.1 51 137-187 256-313 (475)
327 1ju2_A HydroxynitrIle lyase; f 87.6 0.28 9.6E-06 47.6 3.0 30 85-129 28-57 (536)
328 1jnr_A Adenylylsulfate reducta 87.3 0.38 1.3E-05 47.8 3.8 31 85-129 24-58 (643)
329 1jw9_B Molybdopterin biosynthe 87.2 0.66 2.2E-05 40.1 4.9 35 83-130 31-65 (249)
330 2x5o_A UDP-N-acetylmuramoylala 87.0 0.33 1.1E-05 45.8 3.1 33 84-130 6-38 (439)
331 3o4f_A Spermidine synthase; am 86.2 0.3 1E-05 43.4 2.1 46 83-149 84-129 (294)
332 1lld_A L-lactate dehydrogenase 85.2 0.89 3E-05 40.6 4.8 32 84-129 8-41 (319)
333 2bs2_A Quinol-fumarate reducta 85.1 0.94 3.2E-05 45.1 5.4 56 202-259 372-428 (660)
334 3ado_A Lambda-crystallin; L-gu 85.0 0.47 1.6E-05 42.8 2.8 32 84-129 7-38 (319)
335 1chu_A Protein (L-aspartate ox 84.4 0.98 3.3E-05 43.8 5.0 56 202-259 354-410 (540)
336 3ic5_A Putative saccharopine d 84.3 1 3.4E-05 33.2 4.1 33 84-129 6-38 (118)
337 4ffl_A PYLC; amino acid, biosy 84.3 1.4 4.9E-05 40.0 5.9 32 84-129 2-33 (363)
338 3fpf_A Mtnas, putative unchara 84.0 1.4 4.8E-05 39.2 5.4 98 82-208 122-221 (298)
339 3ayj_A Pro-enzyme of L-phenyla 83.9 0.89 3E-05 45.6 4.5 41 84-130 57-97 (721)
340 4gde_A UDP-galactopyranose mut 83.8 0.8 2.7E-05 43.6 4.1 6 306-311 444-449 (513)
341 3l4b_C TRKA K+ channel protien 83.7 0.89 3E-05 38.2 3.9 77 85-189 2-78 (218)
342 3rui_A Ubiquitin-like modifier 83.4 1.1 3.8E-05 40.6 4.6 36 82-130 33-68 (340)
343 3q9t_A Choline dehydrogenase a 83.1 0.66 2.3E-05 45.4 3.2 32 85-129 8-39 (577)
344 3h8v_A Ubiquitin-like modifier 82.9 1.3 4.4E-05 39.3 4.7 36 82-130 35-70 (292)
345 3gyx_A Adenylylsulfate reducta 82.9 1.2 4E-05 44.4 5.0 44 209-260 446-489 (662)
346 3vtf_A UDP-glucose 6-dehydroge 82.7 2 6.9E-05 40.4 6.2 59 82-154 20-87 (444)
347 4e12_A Diketoreductase; oxidor 82.4 1.4 4.6E-05 38.8 4.7 32 84-129 5-36 (283)
348 1n4w_A CHOD, cholesterol oxida 82.3 1.1 3.7E-05 43.1 4.3 31 85-129 7-37 (504)
349 3qvp_A Glucose oxidase; oxidor 81.9 0.78 2.7E-05 45.0 3.2 33 85-130 21-53 (583)
350 1coy_A Cholesterol oxidase; ox 81.8 1.1 3.7E-05 43.1 4.1 22 85-106 13-34 (507)
351 1f0y_A HCDH, L-3-hydroxyacyl-C 80.7 1.7 5.7E-05 38.5 4.8 32 84-129 16-47 (302)
352 3fim_B ARYL-alcohol oxidase; A 80.7 0.66 2.3E-05 45.3 2.2 32 85-129 4-35 (566)
353 1zud_1 Adenylyltransferase THI 80.5 1.7 5.9E-05 37.5 4.6 35 82-129 27-61 (251)
354 3cp8_A TRNA uridine 5-carboxym 80.3 2.1 7.1E-05 42.4 5.6 43 208-260 370-412 (641)
355 1y8q_A Ubiquitin-like 1 activa 80.1 1.9 6.6E-05 39.2 5.0 60 82-154 35-108 (346)
356 1gpe_A Protein (glucose oxidas 80.1 1.3 4.3E-05 43.5 4.0 20 85-104 26-45 (587)
357 2zxi_A TRNA uridine 5-carboxym 80.0 2.1 7.1E-05 42.3 5.5 44 207-260 380-423 (637)
358 1y8q_B Anthracycline-, ubiquit 80.0 2.7 9.1E-05 41.5 6.2 34 84-130 18-51 (640)
359 3ojo_A CAP5O; rossmann fold, c 79.9 4.2 0.00014 38.1 7.4 32 84-129 12-43 (431)
360 3h5n_A MCCB protein; ubiquitin 79.7 2.1 7.2E-05 39.0 5.1 36 82-130 117-152 (353)
361 3oj0_A Glutr, glutamyl-tRNA re 79.5 0.88 3E-05 35.4 2.2 33 83-129 21-53 (144)
362 1tt5_B Ubiquitin-activating en 79.3 2.3 8E-05 39.9 5.4 33 84-129 41-73 (434)
363 4gsl_A Ubiquitin-like modifier 78.3 2 6.7E-05 42.1 4.6 47 70-130 314-360 (615)
364 2raf_A Putative dinucleotide-b 78.0 2.5 8.7E-05 35.2 4.8 32 84-129 20-51 (209)
365 2bcg_G Secretory pathway GDP d 77.9 2.7 9.1E-05 39.6 5.5 52 138-190 243-302 (453)
366 2jbv_A Choline oxidase; alcoho 77.9 1.2 4.3E-05 43.1 3.2 31 85-129 15-46 (546)
367 3hg7_A D-isomer specific 2-hyd 77.8 9 0.00031 34.3 8.6 34 82-129 139-172 (324)
368 3ces_A MNMG, tRNA uridine 5-ca 77.7 2.9 9.9E-05 41.4 5.7 45 206-260 374-418 (651)
369 3p2y_A Alanine dehydrogenase/p 77.2 2.7 9.3E-05 38.7 5.0 33 83-129 184-216 (381)
370 3vh1_A Ubiquitin-like modifier 76.8 2 7E-05 41.9 4.3 36 81-129 325-360 (598)
371 3cmm_A Ubiquitin-activating en 76.5 2.3 7.9E-05 44.4 4.8 39 84-130 426-464 (1015)
372 4g65_A TRK system potassium up 76.4 2.5 8.5E-05 40.1 4.7 32 84-129 4-35 (461)
373 3q2o_A Phosphoribosylaminoimid 76.3 3.7 0.00013 37.7 5.8 33 83-129 14-46 (389)
374 1zej_A HBD-9, 3-hydroxyacyl-CO 76.2 2.8 9.6E-05 37.1 4.7 33 82-129 11-43 (293)
375 1qo8_A Flavocytochrome C3 fuma 76.2 1.9 6.5E-05 41.9 4.0 56 202-259 502-563 (566)
376 4amu_A Ornithine carbamoyltran 76.1 3.7 0.00012 37.5 5.5 103 24-155 127-240 (365)
377 1pzg_A LDH, lactate dehydrogen 76.1 3 0.0001 37.6 5.0 32 84-129 10-42 (331)
378 1ks9_A KPA reductase;, 2-dehyd 75.8 2.9 9.8E-05 36.4 4.7 31 85-129 2-32 (291)
379 1d5t_A Guanine nucleotide diss 75.6 1.7 5.9E-05 40.7 3.4 53 137-189 234-291 (433)
380 3d4o_A Dipicolinate synthase s 75.6 3.3 0.00011 36.5 5.1 34 82-129 154-187 (293)
381 2dpo_A L-gulonate 3-dehydrogen 75.5 2.6 8.8E-05 37.9 4.4 32 84-129 7-38 (319)
382 4dio_A NAD(P) transhydrogenase 75.5 3.1 0.0001 38.7 4.9 33 83-129 190-222 (405)
383 2eez_A Alanine dehydrogenase; 75.3 3.3 0.00011 37.9 5.2 33 83-129 166-198 (369)
384 2rir_A Dipicolinate synthase, 75.3 3.4 0.00011 36.6 5.1 34 82-129 156-189 (300)
385 1zcj_A Peroxisomal bifunctiona 75.2 4.6 0.00016 38.2 6.3 34 82-129 36-69 (463)
386 2v6b_A L-LDH, L-lactate dehydr 75.1 3 0.0001 37.0 4.7 33 85-129 2-34 (304)
387 3e8x_A Putative NAD-dependent 75.1 3.6 0.00012 34.6 5.0 74 83-188 21-96 (236)
388 1nyt_A Shikimate 5-dehydrogena 75.0 3.4 0.00012 36.0 4.9 33 83-129 119-151 (271)
389 2ew2_A 2-dehydropantoate 2-red 74.8 3.1 0.00011 36.6 4.8 31 84-128 4-34 (316)
390 3nks_A Protoporphyrinogen oxid 74.8 4.8 0.00017 37.7 6.4 50 138-187 235-289 (477)
391 3g79_A NDP-N-acetyl-D-galactos 74.8 3.3 0.00011 39.4 5.1 33 83-129 18-52 (478)
392 1x13_A NAD(P) transhydrogenase 74.7 3.3 0.00011 38.4 5.0 33 83-129 172-204 (401)
393 3doj_A AT3G25530, dehydrogenas 74.5 3.3 0.00011 36.8 4.8 35 81-129 19-53 (310)
394 2ewd_A Lactate dehydrogenase,; 74.4 3.3 0.00011 36.9 4.8 32 84-129 5-37 (317)
395 2wtb_A MFP2, fatty acid multif 74.3 4.9 0.00017 40.4 6.4 34 82-129 311-344 (725)
396 3l9w_A Glutathione-regulated p 74.3 3.1 0.00011 38.8 4.7 32 84-129 5-36 (413)
397 2a9f_A Putative malic enzyme ( 74.1 4 0.00014 37.7 5.3 34 84-130 189-222 (398)
398 2vhw_A Alanine dehydrogenase; 74.0 3.8 0.00013 37.7 5.2 34 82-129 167-200 (377)
399 1bg6_A N-(1-D-carboxylethyl)-L 73.9 3.3 0.00011 37.3 4.8 31 84-128 5-35 (359)
400 3g17_A Similar to 2-dehydropan 73.8 2.2 7.7E-05 37.6 3.5 31 85-129 4-34 (294)
401 3ond_A Adenosylhomocysteinase; 73.8 3.6 0.00012 39.2 5.0 33 82-128 264-296 (488)
402 1vl6_A Malate oxidoreductase; 73.6 4.1 0.00014 37.5 5.2 34 84-130 193-226 (388)
403 3gvp_A Adenosylhomocysteinase 73.4 3.8 0.00013 38.3 5.0 33 82-128 219-251 (435)
404 3dtt_A NADP oxidoreductase; st 73.3 4.3 0.00015 34.7 5.1 33 83-129 19-51 (245)
405 3gpi_A NAD-dependent epimerase 73.1 3.7 0.00013 35.5 4.8 32 84-129 4-35 (286)
406 2i6u_A Otcase, ornithine carba 72.9 8 0.00027 34.4 6.8 100 24-154 95-205 (307)
407 2vns_A Metalloreductase steap3 72.9 3.7 0.00013 34.3 4.5 32 84-129 29-60 (215)
408 2h78_A Hibadh, 3-hydroxyisobut 72.8 3.5 0.00012 36.3 4.6 32 84-129 4-35 (302)
409 3qsg_A NAD-binding phosphogluc 72.7 9 0.00031 34.0 7.3 32 84-129 25-57 (312)
410 2y0c_A BCEC, UDP-glucose dehyd 72.6 3.7 0.00013 39.1 4.9 32 84-129 9-40 (478)
411 1l7d_A Nicotinamide nucleotide 72.4 4 0.00014 37.5 5.0 34 82-129 171-204 (384)
412 3k6j_A Protein F01G10.3, confi 72.4 4.1 0.00014 38.6 5.0 34 82-129 53-86 (460)
413 1jnr_A Adenylylsulfate reducta 72.2 4.3 0.00015 40.1 5.4 39 215-260 430-468 (643)
414 3gg2_A Sugar dehydrogenase, UD 72.1 3.8 0.00013 38.7 4.8 31 85-129 4-34 (450)
415 3orq_A N5-carboxyaminoimidazol 71.8 4.5 0.00015 37.0 5.2 33 83-129 12-44 (377)
416 4dll_A 2-hydroxy-3-oxopropiona 71.7 4 0.00014 36.4 4.7 34 82-129 30-63 (320)
417 1s3e_A Amine oxidase [flavin-c 71.7 4.4 0.00015 38.7 5.3 7 305-311 419-425 (520)
418 3h9u_A Adenosylhomocysteinase; 71.6 4.4 0.00015 37.9 5.0 33 83-129 211-243 (436)
419 2egg_A AROE, shikimate 5-dehyd 71.4 4.1 0.00014 36.1 4.6 33 83-129 141-174 (297)
420 3n58_A Adenosylhomocysteinase; 71.2 4.5 0.00015 38.0 4.9 33 82-128 246-278 (464)
421 1pjc_A Protein (L-alanine dehy 71.2 4.8 0.00016 36.7 5.2 33 83-129 167-199 (361)
422 1tt5_A APPBP1, amyloid protein 71.2 3.5 0.00012 39.8 4.4 34 84-130 33-66 (531)
423 3v76_A Flavoprotein; structura 71.1 2.7 9.1E-05 39.2 3.5 42 209-254 375-416 (417)
424 4id9_A Short-chain dehydrogena 71.1 3.7 0.00013 36.7 4.3 36 80-129 16-52 (347)
425 4a7p_A UDP-glucose dehydrogena 71.0 10 0.00035 35.7 7.5 32 84-129 9-40 (446)
426 3g5s_A Methylenetetrahydrofola 70.9 3.4 0.00012 38.5 4.0 43 208-260 320-362 (443)
427 1hdo_A Biliverdin IX beta redu 70.8 5.3 0.00018 32.3 5.0 32 84-129 4-36 (206)
428 1vlv_A Otcase, ornithine carba 70.8 8.4 0.00029 34.6 6.5 100 24-154 114-224 (325)
429 3pef_A 6-phosphogluconate dehy 70.7 4.5 0.00015 35.3 4.7 32 84-129 2-33 (287)
430 1leh_A Leucine dehydrogenase; 70.7 4.8 0.00016 36.8 5.0 32 83-128 173-204 (364)
431 1a5z_A L-lactate dehydrogenase 70.6 4.6 0.00016 36.1 4.8 31 85-129 2-34 (319)
432 2i6t_A Ubiquitin-conjugating e 70.5 5.1 0.00017 35.6 5.0 35 83-129 14-48 (303)
433 3phh_A Shikimate dehydrogenase 70.5 5 0.00017 35.0 4.8 33 83-129 118-150 (269)
434 1y6j_A L-lactate dehydrogenase 70.5 4.4 0.00015 36.2 4.7 34 84-129 8-41 (318)
435 1y0p_A Fumarate reductase flav 70.3 2.7 9.2E-05 40.9 3.4 56 202-259 507-568 (571)
436 1pvv_A Otcase, ornithine carba 70.3 11 0.00036 33.7 7.0 100 24-154 102-211 (315)
437 3ius_A Uncharacterized conserv 70.2 4.3 0.00015 35.1 4.5 70 84-188 6-75 (286)
438 1p77_A Shikimate 5-dehydrogena 70.1 3.8 0.00013 35.7 4.1 33 83-129 119-151 (272)
439 2hjr_A Malate dehydrogenase; m 70.1 5 0.00017 36.1 4.9 32 84-129 15-47 (328)
440 2gas_A Isoflavone reductase; N 69.9 16 0.00056 31.6 8.3 82 84-187 3-87 (307)
441 2nvu_B Maltose binding protein 69.9 4 0.00014 41.5 4.8 36 82-130 410-445 (805)
442 1mv8_A GMD, GDP-mannose 6-dehy 69.8 4.1 0.00014 38.1 4.5 31 85-129 2-32 (436)
443 3ce6_A Adenosylhomocysteinase; 69.8 4.9 0.00017 38.4 5.0 34 82-129 273-306 (494)
444 4e4t_A Phosphoribosylaminoimid 69.5 5 0.00017 37.4 5.0 33 83-129 35-67 (419)
445 3tnl_A Shikimate dehydrogenase 69.4 5.7 0.0002 35.5 5.1 33 83-129 154-187 (315)
446 1guz_A Malate dehydrogenase; o 69.4 4.4 0.00015 36.0 4.4 33 85-129 2-34 (310)
447 3pqe_A L-LDH, L-lactate dehydr 69.3 5.7 0.00019 35.7 5.1 33 84-128 6-38 (326)
448 2hk9_A Shikimate dehydrogenase 69.3 5.1 0.00017 34.9 4.7 33 83-129 129-161 (275)
449 1txg_A Glycerol-3-phosphate de 69.1 4.7 0.00016 35.9 4.6 30 85-128 2-31 (335)
450 3jyo_A Quinate/shikimate dehyd 68.8 5.6 0.00019 34.9 4.9 33 83-129 127-160 (283)
451 1duv_G Octase-1, ornithine tra 68.8 12 0.0004 33.8 7.0 101 24-154 100-212 (333)
452 3vku_A L-LDH, L-lactate dehydr 68.8 5.4 0.00019 35.8 4.9 35 82-128 8-42 (326)
453 3tl2_A Malate dehydrogenase; c 68.7 5.6 0.00019 35.6 4.9 32 84-129 9-41 (315)
454 1jay_A Coenzyme F420H2:NADP+ o 68.6 5.4 0.00018 32.9 4.6 31 85-129 2-33 (212)
455 3ax6_A Phosphoribosylaminoimid 68.5 5.6 0.00019 36.3 5.0 23 84-106 2-24 (380)
456 4aj2_A L-lactate dehydrogenase 68.5 5.2 0.00018 36.0 4.7 37 80-128 16-52 (331)
457 3g0o_A 3-hydroxyisobutyrate de 68.4 5.4 0.00019 35.2 4.8 32 84-129 8-39 (303)
458 1vg0_A RAB proteins geranylger 68.4 4.2 0.00014 40.3 4.3 33 84-130 9-41 (650)
459 3fbt_A Chorismate mutase and s 68.2 5.9 0.0002 34.8 4.9 33 83-129 122-155 (282)
460 3h2s_A Putative NADH-flavin re 68.0 6.4 0.00022 32.5 4.9 71 85-187 2-73 (224)
461 2dbq_A Glyoxylate reductase; D 68.0 5.8 0.0002 35.7 4.9 34 82-129 149-182 (334)
462 3i6d_A Protoporphyrinogen oxid 67.9 5.1 0.00017 37.3 4.7 10 138-147 236-245 (470)
463 2h88_A Succinate dehydrogenase 67.8 3.4 0.00012 40.8 3.5 56 203-259 368-432 (621)
464 1t2d_A LDH-P, L-lactate dehydr 67.8 6.1 0.00021 35.4 5.0 33 84-129 5-37 (322)
465 4ep1_A Otcase, ornithine carba 67.8 11 0.00038 33.9 6.6 100 24-154 126-235 (340)
466 4g65_A TRK system potassium up 67.7 5 0.00017 37.9 4.6 80 82-189 234-313 (461)
467 3ew7_A LMO0794 protein; Q8Y8U8 67.6 6.6 0.00023 32.2 4.9 71 85-188 2-73 (221)
468 1a4i_A Methylenetetrahydrofola 67.6 5.9 0.0002 35.1 4.7 34 82-129 164-198 (301)
469 2g5c_A Prephenate dehydrogenas 67.4 6 0.0002 34.3 4.8 33 84-128 2-34 (281)
470 2aef_A Calcium-gated potassium 67.4 2.7 9.1E-05 35.5 2.4 73 84-187 10-82 (234)
471 3pdu_A 3-hydroxyisobutyrate de 67.3 4.9 0.00017 35.1 4.2 32 84-129 2-33 (287)
472 1b37_A Protein (polyamine oxid 66.8 4.8 0.00017 37.8 4.4 6 306-311 424-429 (472)
473 3ldh_A Lactate dehydrogenase; 66.7 6 0.0002 35.6 4.7 36 82-129 20-55 (330)
474 3t4e_A Quinate/shikimate dehyd 66.6 7.2 0.00025 34.8 5.2 34 83-129 148-181 (312)
475 2wdq_A Succinate dehydrogenase 66.6 2.9 9.8E-05 41.0 2.7 57 203-260 358-424 (588)
476 2f1k_A Prephenate dehydrogenas 66.5 6.4 0.00022 34.1 4.8 30 85-128 2-31 (279)
477 1gpj_A Glutamyl-tRNA reductase 66.5 6 0.00021 36.6 4.8 34 82-129 166-200 (404)
478 1c1d_A L-phenylalanine dehydro 66.5 6.7 0.00023 35.7 5.0 33 82-128 174-206 (355)
479 3grf_A Ornithine carbamoyltran 66.4 19 0.00065 32.3 7.9 109 24-154 101-222 (328)
480 3gd5_A Otcase, ornithine carba 66.3 13 0.00043 33.3 6.7 100 24-154 104-213 (323)
481 1z82_A Glycerol-3-phosphate de 65.9 5.9 0.0002 35.5 4.6 30 85-128 16-45 (335)
482 3k96_A Glycerol-3-phosphate de 65.8 4.9 0.00017 36.6 4.0 31 84-128 30-60 (356)
483 1v8b_A Adenosylhomocysteinase; 65.7 6.7 0.00023 37.2 5.0 34 82-129 256-289 (479)
484 3pwz_A Shikimate dehydrogenase 65.2 7.1 0.00024 34.1 4.7 34 83-129 120-153 (272)
485 2i0z_A NAD(FAD)-utilizing dehy 65.2 4.6 0.00016 37.8 3.8 53 203-259 387-443 (447)
486 3pid_A UDP-glucose 6-dehydroge 65.0 6.4 0.00022 36.9 4.6 31 84-129 37-67 (432)
487 3i6i_A Putative leucoanthocyan 64.9 23 0.0008 31.3 8.4 80 84-186 11-93 (346)
488 1b0a_A Protein (fold bifunctio 64.8 6.1 0.00021 34.7 4.2 34 82-129 158-192 (288)
489 3qiv_A Short-chain dehydrogena 64.7 28 0.00095 29.2 8.5 50 83-153 9-59 (253)
490 3mog_A Probable 3-hydroxybutyr 64.6 5.8 0.0002 37.8 4.4 32 84-129 6-37 (483)
491 3ggo_A Prephenate dehydrogenas 64.5 7.1 0.00024 34.8 4.8 32 84-129 34-67 (314)
492 3rkr_A Short chain oxidoreduct 64.5 21 0.00072 30.3 7.7 49 84-153 30-79 (262)
493 3cky_A 2-hydroxymethyl glutara 64.4 6.7 0.00023 34.3 4.5 31 84-128 5-35 (301)
494 3ngx_A Bifunctional protein fo 64.4 7.3 0.00025 34.0 4.6 34 82-129 149-183 (276)
495 3gvi_A Malate dehydrogenase; N 64.3 7.8 0.00027 34.8 4.9 32 84-129 8-40 (324)
496 1lu9_A Methylene tetrahydromet 64.1 8.5 0.00029 33.6 5.1 34 82-129 118-152 (287)
497 3o8q_A Shikimate 5-dehydrogena 64.1 7.2 0.00025 34.2 4.6 73 83-188 126-199 (281)
498 3k5i_A Phosphoribosyl-aminoimi 64.0 7.6 0.00026 35.9 5.0 30 84-127 25-54 (403)
499 1u7z_A Coenzyme A biosynthesis 64.0 8.6 0.0003 32.5 4.9 33 83-129 8-57 (226)
500 3p2o_A Bifunctional protein fo 63.9 7.4 0.00025 34.2 4.6 34 82-129 159-193 (285)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=9.3e-63 Score=482.37 Aligned_cols=327 Identities=32% Similarity=0.608 Sum_probs=280.1
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHH
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTG 95 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 95 (352)
.+++.+++||+||||||++|+++++||++++++++++++|+.++++++.++++.+..+...+++++..++++|||||++|
T Consensus 150 ~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tG 229 (502)
T 4g6h_A 150 QAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTG 229 (502)
T ss_dssp TTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHH
T ss_pred cCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcch
Confidence 35678999999999999999999999999999999999999999999999998877655555666777899999999999
Q ss_pred HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCeEEE----
Q 018671 96 VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLIL---- 169 (352)
Q Consensus 96 ~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~---- 169 (352)
+|+|.+|+++.+..+.+.|+.+.++.+|+|+++. +++|.+++++++.+.+.|+++||+++++ +|++++++.+.+
T Consensus 230 vE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~ 309 (502)
T 4g6h_A 230 VEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKH 309 (502)
T ss_dssp HHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEEC
T ss_pred hhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEe
Confidence 9999999999877776667666667899999997 7999999999999999999999999999 899999997765
Q ss_pred cCC----cEEecceEEEecCCCcchhhh----hcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCch
Q 018671 170 NDG----TEVPYGLLVWSTGVGPSTLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241 (352)
Q Consensus 170 ~~g----~~i~~D~vi~a~G~~~~~~~~----~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~ 241 (352)
.|| +++++|++|||+|.+|+++.. .+++..+.+|+|.||++||++++|||||+|||+.. +.|+++
T Consensus 310 ~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~-------~~p~~a 382 (502)
T 4g6h_A 310 EDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFA-------GLPPTA 382 (502)
T ss_dssp TTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEES-------SSCCCH
T ss_pred cCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCC-------CCCCch
Confidence 355 369999999999999986544 34566677899999999999999999999999974 458999
Q ss_pred HHHHHHHHHHHHHHHHHhhhC------CCCCC----CcccCCCCCCceeeccceEEEecCcceeeeccccccCCCeEeec
Q 018671 242 QVAERQGKYLFSLLNRIGKAG------GGRAN----SAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 311 (352)
Q Consensus 242 ~~A~~qg~~~a~~i~~~~~~~------~g~~~----~~~~~~~~~~f~~~~~g~~~~lG~~~av~~~~~~~~~~~~~~~G 311 (352)
+.|.+||+++|+||.+..+.. ..+.. .....++ +||+|+++|+|++||+++||+++.+... ..+.+.|
T Consensus 383 ~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pF~y~~~G~~a~lG~~~av~~~~~~~~-~~~~~~G 460 (502)
T 4g6h_A 383 QVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNF-KPFKYNDLGALAYLGSERAIATIRSGKR-TFYTGGG 460 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHHTTC-CCCCCCCCEEEEECSTTCEEEEEEETTE-EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcCCCC-CCCEecCcceEEEEeCCceEEEccCCCc-cceeccc
Confidence 999999999999998754310 00000 0011234 8999999999999999999999864322 3367789
Q ss_pred HHHHHHHHHHHHHhcCCcchhHHhHHHHHHHhccCCCCCC
Q 018671 312 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 351 (352)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 351 (352)
+++|++|+++|++++++||||+.++++|++.+||+||++|
T Consensus 461 ~~a~~~w~~~yl~~l~~~r~r~~v~~~W~~~~~fgRdisr 500 (502)
T 4g6h_A 461 LMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFK 500 (502)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHHHHHHHHHHccchhhhHHHHHHHHHHHhCCCCCcC
Confidence 9999999999999999999999999999999999999997
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=1.8e-40 Score=319.35 Aligned_cols=314 Identities=18% Similarity=0.202 Sum_probs=234.8
Q ss_pred Eeeccccccc-cCCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccC
Q 018671 5 CETVTDELRT-LEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83 (352)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (352)
++.++.+.++ .+.++.+++||+||||||+++. +++||+.++++++++++++.++++++.+... .
T Consensus 78 v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~--------------~ 142 (430)
T 3hyw_A 78 AESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYA--------------N 142 (430)
T ss_dssp EEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHH--------------S
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhcc--------------C
Confidence 3455555544 4456779999999999999875 5799999999999999999999998743221 1
Q ss_pred CcEEEECCCh------HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC----CCCcHHHHHHHHHHHHhCCCE
Q 018671 84 LHCVVVGGGP------TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----SSFDDRLRHYATTQLSKSGVR 153 (352)
Q Consensus 84 ~~vvVvGgG~------~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l----~~~~~~~~~~~~~~l~~~gV~ 153 (352)
+.++|+||++ .+.|+|..++...++ ...+.+.+|++++..+.+ +...+...+.+++.|+++||+
T Consensus 143 ~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~------~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~ 216 (430)
T 3hyw_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKK------RGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNID 216 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHH------TTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCE
T ss_pred CceEEEeCCCcEEEhHHHHHHHHHHHHHHHH------hcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeE
Confidence 2455665543 233444444433311 122345789999886433 345677888899999999999
Q ss_pred EEeC-ceEEEECCeEEEcC----CcEEecceEEEecCCCcchhhhhcCC--CCCCCCccccCCccccCCCCCEEEEcccc
Q 018671 154 LVRG-IVKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKSLDL--PKSPGGRIGIDEWLRVPSVQDVFAVGDCS 226 (352)
Q Consensus 154 v~~~-~V~~v~~~~v~~~~----g~~i~~D~vi~a~G~~~~~~~~~~~l--~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a 226 (352)
++++ +|++++++++.+++ ++++++|+++|++|.+|++++..+++ ..+.+|++.||++||++++|||||+|||+
T Consensus 217 ~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a 296 (430)
T 3hyw_A 217 WIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVT 296 (430)
T ss_dssp EECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTB
T ss_pred EEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCEEEeccEE
Confidence 9999 89999999888764 35899999999999999988777664 34566789999999988999999999999
Q ss_pred ccccCCCC---cCCCCchHHHHHHHHHHHHHHHHHhhhCCCCCCCcccCCCCCCceeeccceEEEecCcceeeecccccc
Q 018671 227 GYLESTGK---TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 303 (352)
Q Consensus 227 ~~~~~~~~---~~~~~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~f~~~~~g~~~~lG~~~av~~~~~~~~ 303 (352)
++++..+. ...|++++.|.+||+++|+||.+.++ |+ ++ +++.+...++++++|.+.+++.......
T Consensus 297 ~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~---g~-------~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 365 (430)
T 3hyw_A 297 AIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR---NN-------PD-KYAPRLSAICIADFGEDAGFFFADPVIP 365 (430)
T ss_dssp CCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT---TC-------CC-CEEECCCEEEEEECSSSEEEEEEESSSS
T ss_pred ecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhc---CC-------CC-CcccCCcEEEEEEcCCCcEEEEEcccCC
Confidence 98764332 23689999999999999999999876 32 22 4455566778899999999875422111
Q ss_pred --CCCeEeecHHH---------HHHHHHHHHHhcCCcchhHHhHHHHHHHhccCCCCC
Q 018671 304 --SKGLSLAGFLS---------WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 350 (352)
Q Consensus 304 --~~~~~~~G~~~---------~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~ 350 (352)
...+...|.++ |++|+..|....+.+++|+.++++|+....+.|+..
T Consensus 366 ~~~~~~~~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 423 (430)
T 3hyw_A 366 PRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCE 423 (430)
T ss_dssp SCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCCCSEEECSCCC
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHHHHHHhcccccccCcccc
Confidence 12244556554 566777777778999999999999999998888864
No 3
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=9.9e-35 Score=279.76 Aligned_cols=209 Identities=20% Similarity=0.326 Sum_probs=186.6
Q ss_pred CCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHH
Q 018671 17 PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 96 (352)
Q Consensus 17 ~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~ 96 (352)
.++.+++||+||||||++|+.|++|| ++.+.+++++++..+++.+. ..+.++++|||||++|+
T Consensus 98 ~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~---------------~~~~~~vvViGgG~ig~ 160 (437)
T 4eqs_A 98 NEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIK---------------ANQVDKVLVVGAGYVSL 160 (437)
T ss_dssp TEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHH---------------HHTCCEEEEECCSHHHH
T ss_pred CceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhh---------------ccCCcEEEEECCccchh
Confidence 45567999999999999999999998 56678899999998877642 12235999999999999
Q ss_pred HHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCeEEEcCCcE
Q 018671 97 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTE 174 (352)
Q Consensus 97 e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~~~g~~ 174 (352)
|+|..+++++ .+|+++++. ++++.++++..+.+.+.|+++||+++++ +|++++++.+.+++|++
T Consensus 161 E~A~~l~~~g--------------~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~ 226 (437)
T 4eqs_A 161 EVLENLYERG--------------LHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKV 226 (437)
T ss_dssp HHHHHHHHHT--------------CEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCE
T ss_pred hhHHHHHhcC--------------CcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeE
Confidence 9999999988 899999997 7899999999999999999999999999 89999999999999999
Q ss_pred EecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccC-CCCcCCCCchHHHHHHHHHHH
Q 018671 175 VPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKYLF 252 (352)
Q Consensus 175 i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~-~~~~~~~~~~~~A~~qg~~~a 252 (352)
+++|.|++++|.+|+ .+++.++++.+++|+|.||+++|+ +.|||||+|||+..+.. .+....+++++.|.+||+++|
T Consensus 227 ~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a 305 (437)
T 4eqs_A 227 EHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVA 305 (437)
T ss_dssp EECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBC-SSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHH
T ss_pred EeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccC-CCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHH
Confidence 999999999999999 588888999999999999999998 99999999999987653 344556889999999999999
Q ss_pred HHHHH
Q 018671 253 SLLNR 257 (352)
Q Consensus 253 ~~i~~ 257 (352)
+||..
T Consensus 306 ~ni~g 310 (437)
T 4eqs_A 306 EQIAG 310 (437)
T ss_dssp HHHHS
T ss_pred HHHcC
Confidence 99963
No 4
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=2.4e-34 Score=277.27 Aligned_cols=284 Identities=16% Similarity=0.123 Sum_probs=212.8
Q ss_pred ccCCCeeEeeCCEEEEcCCCCCCCCCCCCccc---cCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEEC
Q 018671 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVG 90 (352)
Q Consensus 14 ~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG 90 (352)
+...++.++.||+||||||+.|+.+.+||+.+ +.+.+++.+++.++++++...+. ..+++|||
T Consensus 91 V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--------------~~~~vVVG 156 (437)
T 3sx6_A 91 ITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLR--------------EPGPIVIG 156 (437)
T ss_dssp EEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHH--------------SCCCEEEE
T ss_pred EEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHh--------------CCCEEEEE
Confidence 34455667999999999999999999999863 56788999999999887642211 12578899
Q ss_pred CChHH------HHHHHHHHHhHhhHHHhhcCCCCCccE-EEEEeCC-CC----CCCCcHHHHHHHHHHHHhCCCEEEeC-
Q 018671 91 GGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEAN-EI----LSSFDDRLRHYATTQLSKSGVRLVRG- 157 (352)
Q Consensus 91 gG~~g------~e~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~-~~----l~~~~~~~~~~~~~~l~~~gV~v~~~- 157 (352)
+|+++ +|+|.++++..++. ..+.+.+ |+++++. .+ ++.++ +..+.+.+.|+++||+++++
T Consensus 157 gG~~~g~~G~~~E~a~~la~~l~~~------g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~~~~~~~~l~~~gI~~~~~~ 229 (437)
T 3sx6_A 157 AMAGASCFGPAYEYAMIVASDLKKR------GMRDKIPSFTFITSEPYIGHLGIQGVG-DSKGILTKGLKEEGIEAYTNC 229 (437)
T ss_dssp ECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCSCEEEEESSSSTTCTTTTCCT-THHHHHHHHHHHTTCEEECSE
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHHc------CCcccCcEEEEEcCCccccccccCcch-HHHHHHHHHHHHCCCEEEcCC
Confidence 87654 99998887765321 1112245 9999987 44 33333 57888999999999999999
Q ss_pred ceEEEECCeEEEcC---------CcEEecceEEEecCCCcchhhhh-cCCCCCCCCccccCCccccCCCCCEEEEccccc
Q 018671 158 IVKDVDSQKLILND---------GTEVPYGLLVWSTGVGPSTLVKS-LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 227 (352)
Q Consensus 158 ~V~~v~~~~v~~~~---------g~~i~~D~vi~a~G~~~~~~~~~-~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~ 227 (352)
+|++++++.+.+++ ++++++|++++++|+++++.+.+ .++ .+++|+|.||+++|++++|||||+|||+.
T Consensus 230 ~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~ 308 (437)
T 3sx6_A 230 KVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIA 308 (437)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBC
T ss_pred EEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc-cCCCCcEEeChhccCCCCCCEEEEEEEec
Confidence 89999999887764 67899999999999998864443 566 57889999999999999999999999998
Q ss_pred cccCCCCc---CCCCchHHHHHHHHHHHHHHHHHhhhCCCCCCCcccCCCCCCceeeccceE-EEecCcceeeecccc--
Q 018671 228 YLESTGKT---VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM-ATIGRYKALVDLRQN-- 301 (352)
Q Consensus 228 ~~~~~~~~---~~~~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~f~~~~~g~~-~~lG~~~av~~~~~~-- 301 (352)
.+.+.+.. +.|++++.|.+||+.+|+||.+.+. |+ ++ .+|.+.....| +++|...++......
T Consensus 309 ~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~---g~-------~~-~~~~~~~~~~~~~~~G~~~~~~~~~~~~p 377 (437)
T 3sx6_A 309 IPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLE---GR-------KG-EQTMGTWNAVAFADMGDRGAAFIALPQLK 377 (437)
T ss_dssp CCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT---TS-------CC-CCCCCSCCEEEEEECSSCEEEEEEESSSS
T ss_pred cCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc---CC-------CC-CCcccCcceEEEEEeCCCceEEEeCCCCC
Confidence 76543321 2588999999999999999999876 32 22 55555555555 458887766522110
Q ss_pred ccCCCeEeecHHHHHHHHHHHHHhcCCcc
Q 018671 302 KESKGLSLAGFLSWLVWRSAYLTRVVSWR 330 (352)
Q Consensus 302 ~~~~~~~~~G~~~~~~~~~~~l~~~~~~~ 330 (352)
+....+.+.|.++|++|..++..++..++
T Consensus 378 ~~~~~~~~~g~~~~~~K~~~~~~f~~~~~ 406 (437)
T 3sx6_A 378 PRKVDVFAYGRWVHLAKVAFEKYFIRKMK 406 (437)
T ss_dssp SCSEEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccccHHHHHHHHHHHHHHHHHhc
Confidence 12245789999999999988877764433
No 5
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=4.6e-33 Score=267.73 Aligned_cols=290 Identities=17% Similarity=0.166 Sum_probs=217.3
Q ss_pred cCCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 15 LEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
...++.++.||+||+|||+.|+.|++.. .++...+++.+++.++++.+...+. .++++|||+|++
T Consensus 89 ~~~~g~~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~~--------------~~~~vVVGgG~~ 153 (430)
T 3h28_A 89 TTQSGKKIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELYA--------------NPGPVVIGAIPG 153 (430)
T ss_dssp EETTCCEEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHHH--------------SCCCEEEEECTT
T ss_pred EECCCcEEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHHh--------------cCCeEEEEcCCC
Confidence 3445667999999999999987653321 2456778899999988876532211 125788998876
Q ss_pred H------HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CC----CCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEE
Q 018671 95 G------VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI----LSSFDDRLRHYATTQLSKSGVRLVRG-IVKDV 162 (352)
Q Consensus 95 g------~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~----l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v 162 (352)
+ +|+|..+++..++. ..+.+.+|+++++. .+ ++.++ ...+.+.+.|+++||+++++ +|+++
T Consensus 154 ~~~~G~~~E~a~~la~~l~~~------g~~~~~~V~~v~~~~~~~~~~l~~~~-~~~~~l~~~l~~~GV~i~~~~~v~~v 226 (430)
T 3h28_A 154 VSCFGPAYEFALMLHYELKKR------GIRYKVPMTFITSEPYLGHFGVGGIG-ASKRLVEDLFAERNIDWIANVAVKAI 226 (430)
T ss_dssp CCCCHHHHHHHHHHHHHHHHT------TCGGGCCEEEECSSSSTTCTTTTCST-THHHHHHHHHHHTTCEEECSCEEEEE
T ss_pred CCcCcHHHHHHHHHHHHHHHc------CCccceEEEEecCCccccccccCcch-HHHHHHHHHHHHCCCEEEeCCEEEEE
Confidence 4 99998887655321 11233789999987 34 23333 57888999999999999999 89999
Q ss_pred ECCeEEEcC----CcEEecceEEEecCCCcchhhhhc--CCCCCCCC-ccccCCccccCCCCCEEEEccccccccCCCCc
Q 018671 163 DSQKLILND----GTEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGG-RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKT 235 (352)
Q Consensus 163 ~~~~v~~~~----g~~i~~D~vi~a~G~~~~~~~~~~--~l~~~~~G-~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~ 235 (352)
+++.+.+++ ++++++|.+++++|++|++++.++ ++ .+++| +|.||+++|++++|||||+|||+..+.+.+..
T Consensus 227 ~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~ 305 (430)
T 3h28_A 227 EPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTP 305 (430)
T ss_dssp CSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCS
T ss_pred eCCeEEEEecCCCceEEeeeEEEECCCCccchhHhhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCC
Confidence 999998887 789999999999999998766664 66 67789 99999999998999999999999876543321
Q ss_pred ---CCCCchHHHHHHHHHHHHHHHHHhhhCCCCCCCcccCCCCCCceeeccceEE-EecCcceeeecccc--ccCCCeEe
Q 018671 236 ---VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMA-TIGRYKALVDLRQN--KESKGLSL 309 (352)
Q Consensus 236 ---~~~~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~f~~~~~g~~~-~lG~~~av~~~~~~--~~~~~~~~ 309 (352)
+.|++++.|.+||+++|+||.+.+. |++ .++.+.....|+ .+|...++...... +....+.+
T Consensus 306 ~~~~~pk~~~~A~~~g~~aa~ni~~~l~---g~~---------~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 373 (430)
T 3h28_A 306 IPTGVPKTGMMIEQMAMAVAHNIVNDIR---NNP---------DKYAPRLSAICIADFGEDAGFFFADPVIPPRERVITK 373 (430)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHHHHHHT---TCC---------CCEEECCCEEEEEECSSSEEEEEEESSSSSCSEEEEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhc---CCC---------CCCcCCcceEEEEEeCCCceEEEeCCCCCCccceeec
Confidence 2488999999999999999999876 321 335565555565 48887776522110 12245688
Q ss_pred ecHHHHHHHHHHHHHhcCCcchhHHhHHHH
Q 018671 310 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 339 (352)
Q Consensus 310 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~w 339 (352)
.|.++|++|..++..++..+++....++.|
T Consensus 374 ~g~~~~~~K~~~~~~~~~~~~~~~~~p~~~ 403 (430)
T 3h28_A 374 MGKWAHYFKTAFEKYFLWKVRNGNIAPSFE 403 (430)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHTCSSCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCcCchhH
Confidence 999999999999999888777776655554
No 6
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.2e-33 Score=263.40 Aligned_cols=207 Identities=28% Similarity=0.473 Sum_probs=178.5
Q ss_pred ccccccccCCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEE
Q 018671 8 VTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 87 (352)
Q Consensus 8 ~~~~~~~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 87 (352)
++...+.+..++.++.||+||||||++|+.|++|| .++++++++.+++.++++.+. ..++++
T Consensus 86 id~~~~~V~~~g~~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~-----------------~~~~vv 147 (367)
T 1xhc_A 86 IDRGRKVVITEKGEVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIE-----------------NSGEAI 147 (367)
T ss_dssp EETTTTEEEESSCEEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHH-----------------HHSEEE
T ss_pred EECCCCEEEECCcEEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhh-----------------cCCcEE
Confidence 44444444445678999999999999999999999 577888899999988876542 114999
Q ss_pred EECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC
Q 018671 88 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ 165 (352)
Q Consensus 88 VvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~ 165 (352)
|||||++|+|+|..|++++ .+|+++++. .+++ +++++.+.+.+.|++.||+++++ +|++++.+
T Consensus 148 ViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~ 212 (367)
T 1xhc_A 148 IIGGGFIGLELAGNLAEAG--------------YHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANEE 212 (367)
T ss_dssp EEECSHHHHHHHHHHHHTT--------------CEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECSS
T ss_pred EECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEee
Confidence 9999999999999999887 899999987 6788 99999999999999999999999 89999988
Q ss_pred eEEEcCCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHH
Q 018671 166 KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244 (352)
Q Consensus 166 ~v~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A 244 (352)
.+.+++|+ +++|.|++|+|.+|+. ++++++++.+ +| |.||+++|+ +.|+|||+|||+.... ..+++++.|
T Consensus 213 ~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~g-i~Vd~~~~t-~~~~IyA~GD~a~~~~-----~~~~~~~~A 283 (367)
T 1xhc_A 213 GVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RG-ILIDDNFRT-SAKDVYAIGDCAEYSG-----IIAGTAKAA 283 (367)
T ss_dssp EEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBS-SS-EECCTTSBC-SSTTEEECGGGEEBTT-----BCCCSHHHH
T ss_pred EEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CC-EEECCCccc-CCCCEEEeEeeeecCC-----CCccHHHHH
Confidence 89999998 9999999999999995 8888888875 45 999999998 8999999999997421 235789999
Q ss_pred HHHHHHHHHHHH
Q 018671 245 ERQGKYLFSLLN 256 (352)
Q Consensus 245 ~~qg~~~a~~i~ 256 (352)
.+||+++|+||.
T Consensus 284 ~~qg~~aa~~i~ 295 (367)
T 1xhc_A 284 MEQARVLADILK 295 (367)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999999985
No 7
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=3.7e-32 Score=259.87 Aligned_cols=216 Identities=24% Similarity=0.312 Sum_probs=183.3
Q ss_pred eccccccc-cCCCeeEeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCC
Q 018671 7 TVTDELRT-LEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLL 84 (352)
Q Consensus 7 ~~~~~~~~-~~~~~~~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (352)
.++...+. ...++.++.||+||||||+.|+.|++||.. ++++.+++.+++.++++.+ ...+
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~-----------------~~~~ 144 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW-----------------TSAT 144 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC-----------------CTTC
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh-----------------ccCC
Confidence 33433333 335567899999999999999999999974 5778889999998877643 2236
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEE
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKD 161 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~ 161 (352)
+++|||+|++|+|+|..+.+++ .+|+++++. .+++ .+++++.+.+.+.+++.||+++++ +|++
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 210 (410)
T 3ef6_A 145 RLLIVGGGLIGCEVATTARKLG--------------LSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVG 210 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 9999999999999999999877 899999997 5665 478899999999999999999999 8999
Q ss_pred EECC----eEEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcC
Q 018671 162 VDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV 236 (352)
Q Consensus 162 v~~~----~v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~ 236 (352)
++.+ .|.++||+++++|.||+|+|.+|+ ++++.++++.+ +| |.||+++|+ +.|+|||+|||+..+.+.|...
T Consensus 211 i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~~~g~~~ 287 (410)
T 3ef6_A 211 FSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD-RG-VIVDHCGAT-LAKGVFAVGDVASWPLRAGGRR 287 (410)
T ss_dssp EECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBS-SS-EECCTTSBC-SSTTEEECGGGEEEEBTTSSEE
T ss_pred EeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccC-Ce-EEEccCeeE-CCCCEEEEEcceeccCCCCCee
Confidence 9876 688999999999999999999999 48888999887 44 999999998 9999999999998766544444
Q ss_pred CCCchHHHHHHHHHHHHHHH
Q 018671 237 LPALAQVAERQGKYLFSLLN 256 (352)
Q Consensus 237 ~~~~~~~A~~qg~~~a~~i~ 256 (352)
.+.+++.|..||+.+|+||.
T Consensus 288 ~~~~~~~A~~qg~~aa~~i~ 307 (410)
T 3ef6_A 288 SLETYMNAQRQAAAVAAAIL 307 (410)
T ss_dssp CCCCHHHHHHHHHHHHHHHT
T ss_pred eechHHHHHHHHHHHHHHHc
Confidence 57789999999999999985
No 8
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=4.1e-32 Score=259.35 Aligned_cols=208 Identities=25% Similarity=0.337 Sum_probs=177.5
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCC-CCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGI-HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~i-pG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
..++.++.||+||||||+.|+.|++ ||.+++++.+++.+++.++++.+ ...++|+|||||++
T Consensus 94 ~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~-----------------~~~~~vvViGgG~~ 156 (408)
T 2gqw_A 94 LSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL-----------------RPQSRLLIVGGGVI 156 (408)
T ss_dssp ETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC-----------------CTTCEEEEECCSHH
T ss_pred ECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh-----------------hcCCeEEEECCCHH
Confidence 3456689999999999999999999 99866777788999887765432 12369999999999
Q ss_pred HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCeEEEcC
Q 018671 95 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILND 171 (352)
Q Consensus 95 g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~~~ 171 (352)
|+|+|..|++++ .+|+++++. .+++ .+++++.+.+.+.+++.||+++++ +|++++++.|++++
T Consensus 157 g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~ 222 (408)
T 2gqw_A 157 GLELAATARTAG--------------VHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDD 222 (408)
T ss_dssp HHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETT
T ss_pred HHHHHHHHHhCC--------------CEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECC
Confidence 999999999877 899999997 6777 489999999999999999999999 89999855888999
Q ss_pred CcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCC-CCcCCCCchHHHHHHHH
Q 018671 172 GTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST-GKTVLPALAQVAERQGK 249 (352)
Q Consensus 172 g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~-~~~~~~~~~~~A~~qg~ 249 (352)
|+++++|.||+|+|.+|+ +++++++++.+ +| |.||+++|+ +.|+|||+|||+..+.+. |....+.+++.|.+||+
T Consensus 223 g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 299 (408)
T 2gqw_A 223 GTRIAADMVVVGIGVLANDALARAAGLACD-DG-IFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGI 299 (408)
T ss_dssp SCEEECSEEEECSCEEECCHHHHHHTCCBS-SS-EECCTTCBC-SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHH
T ss_pred CCEEEcCEEEECcCCCccHHHHHhCCCCCC-CC-EEECCCCcc-CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHH
Confidence 999999999999999999 58888898876 46 999999998 999999999999865432 22223557899999999
Q ss_pred HHHHHHHH
Q 018671 250 YLFSLLNR 257 (352)
Q Consensus 250 ~~a~~i~~ 257 (352)
++|+||..
T Consensus 300 ~aa~~i~g 307 (408)
T 2gqw_A 300 AVARHLVD 307 (408)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 99999963
No 9
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.98 E-value=5e-31 Score=252.43 Aligned_cols=208 Identities=24% Similarity=0.385 Sum_probs=179.7
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
..++.++.||+||||||+.|+.|++||.. ++++.+++.+++..++..+. ...++++|||+|++
T Consensus 100 ~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~----------------~~~~~vvViGgG~~ 163 (415)
T 3lxd_A 100 LGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELD----------------AGAKNAVVIGGGYI 163 (415)
T ss_dssp ETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHH----------------TTCCEEEEECCSHH
T ss_pred ECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhh----------------hcCCeEEEECCCHH
Confidence 35667899999999999999999999974 56788899999988877652 01359999999999
Q ss_pred HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----e
Q 018671 95 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----K 166 (352)
Q Consensus 95 g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~ 166 (352)
|+|+|..+.+++ .+|+++++. .+++ .+++.+.+.+.+.+++.||+++++ +|++++.+ .
T Consensus 164 g~e~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~ 229 (415)
T 3lxd_A 164 GLEAAAVLTKFG--------------VNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTG 229 (415)
T ss_dssp HHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEE
T ss_pred HHHHHHHHHhcC--------------CeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEE
Confidence 999999999877 899999997 6766 478999999999999999999999 89999764 5
Q ss_pred EEEcCCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCC--CCcCCCCchHH
Q 018671 167 LILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST--GKTVLPALAQV 243 (352)
Q Consensus 167 v~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~--~~~~~~~~~~~ 243 (352)
|.+++|+++++|.||+|+|.+|+. +++.++++.+ +| |.||+++|+ +.|+|||+|||+..+.+. |....+.+++.
T Consensus 230 v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t-~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~ 306 (415)
T 3lxd_A 230 VRMQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NG-VDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQN 306 (415)
T ss_dssp EEESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SS-EECCTTCBC-SSTTEEECGGGEEEECGGGTTCEECCCSHHH
T ss_pred EEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CC-EEECCCCCc-CCCCEEEEEeeeeecCcccCCcceeechHHH
Confidence 788999999999999999999994 8888898876 45 999999998 999999999999876532 44555678999
Q ss_pred HHHHHHHHHHHHH
Q 018671 244 AERQGKYLFSLLN 256 (352)
Q Consensus 244 A~~qg~~~a~~i~ 256 (352)
|.+||+.+|+||.
T Consensus 307 A~~qg~~aa~~i~ 319 (415)
T 3lxd_A 307 ANDMATAAAKDIC 319 (415)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999985
No 10
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.98 E-value=1.6e-31 Score=255.33 Aligned_cols=210 Identities=22% Similarity=0.320 Sum_probs=179.8
Q ss_pred EeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC--------
Q 018671 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG-------- 92 (352)
Q Consensus 21 ~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG-------- 92 (352)
++.||+||+|||+.|+.+.+||+.++.+.+++.+++.++++.+.. ..++++|||+|
T Consensus 99 ~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~----------------~~~~~vViG~G~f~~~~~~ 162 (409)
T 3h8l_A 99 EEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLES----------------FQGGNIAIGSGPFYQGHNP 162 (409)
T ss_dssp EEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHH----------------CCSEEEEEEECCBCCCCSS
T ss_pred eeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHH----------------hcCCeEEEEecccccCCCc
Confidence 499999999999999999999998777888888999988887631 01267799999
Q ss_pred -----------h------HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEE
Q 018671 93 -----------P------TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLV 155 (352)
Q Consensus 93 -----------~------~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~ 155 (352)
. .|+|+|..+++..++ ...+++.+|+++++.++++.+++.+.+.+.+.|++.||+++
T Consensus 163 ~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~------~g~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~ 236 (409)
T 3h8l_A 163 KPKVPENFVPNADSACEGPVFEMSLMLHGYFKK------KGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLV 236 (409)
T ss_dssp CCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHT------TTCTTTEEEEEECSSSSSTTBCHHHHHHHHHHHHHHTCEEE
T ss_pred cccccccccCCCCcccCCHHHHHHHHHHHHHHH------cCCCCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 2 589999988776532 11223479999998778888899999999999999999999
Q ss_pred eC-ceEEEECCeEEEcCCcEEecceEEEecCCCcchhhhhc--CCCCCCCCccccCCccccCCCCCEEEEccccccccCC
Q 018671 156 RG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 232 (352)
Q Consensus 156 ~~-~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~~~~~~~--~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~ 232 (352)
++ +|++++++.|++++|+++++|++|+++|+.|++++..+ ++ .+++|++.||+++|++++|||||+|||+.+
T Consensus 237 ~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~---- 311 (409)
T 3h8l_A 237 HNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSM---- 311 (409)
T ss_dssp CSCCEEEECSSEEEETTSCEEECSEEEEECCEECCHHHHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTT----
T ss_pred cCCceEEECCCeEEECCCCEEeeeEEEECCCCCccHHHHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccC----
Confidence 98 89999999999999999999999999999999888877 44 467899999999999899999999999974
Q ss_pred CCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 233 GKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 233 ~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+.|+++..|..||+++|+||...+.
T Consensus 312 ---~~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 312 ---TVPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp ---CCSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3488999999999999999998763
No 11
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.97 E-value=4.9e-32 Score=256.68 Aligned_cols=204 Identities=19% Similarity=0.304 Sum_probs=173.8
Q ss_pred Eeecccccc-ccCCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccC
Q 018671 5 CETVTDELR-TLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 83 (352)
Q Consensus 5 ~~~~~~~~~-~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (352)
+..++...+ +.+.++.++.||+||||||++|+.|++||.+ +++++++.+++.++++.+. ..
T Consensus 85 V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~-----------------~~ 146 (385)
T 3klj_A 85 ATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECK-----------------NK 146 (385)
T ss_dssp EEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHH-----------------HH
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhh-----------------cC
Confidence 344444433 3445667899999999999999999999986 8889999999999887652 12
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CcHHHHHHHHHHHHhCCCEEEeC-ceE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-IVK 160 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~V~ 160 (352)
++|+|||||++|+|+|..|++.+ .+|+++++. .+++. ++++..+.+.+.+++.||+++++ +|+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~ 212 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSG--------------TPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFE 212 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGG
T ss_pred CeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEE
Confidence 59999999999999999999887 899999997 67775 89999999999999999999998 676
Q ss_pred EEECCeEEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCC
Q 018671 161 DVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239 (352)
Q Consensus 161 ~v~~~~v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~ 239 (352)
++ |+++++|.||+++|.+|+ ++++.++++.+ +| +.||+++|+ +.|+|||+|||+.+++ +.++
T Consensus 213 ~i---------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~-----~~~~ 275 (385)
T 3klj_A 213 EM---------GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RG-ILVNDHMET-SIKDIYACGDVAEFYG-----KNPG 275 (385)
T ss_dssp GC---------HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SS-EEECTTCBC-SSTTEEECGGGEEETT-----BCCC
T ss_pred Ec---------CeEEecCeEEECcCcccChhhhhhcCCCcC-CC-EEECCCccc-CCCCEEEEEeeEecCC-----Cccc
Confidence 66 678999999999999999 58888888875 45 999999998 9999999999998643 2477
Q ss_pred chHHHHHHHHHHHHHHHH
Q 018671 240 LAQVAERQGKYLFSLLNR 257 (352)
Q Consensus 240 ~~~~A~~qg~~~a~~i~~ 257 (352)
+++.|.+||+.+|+||..
T Consensus 276 ~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 276 LINIANKQGEVAGLNACG 293 (385)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 899999999999999863
No 12
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.97 E-value=1.2e-30 Score=254.97 Aligned_cols=206 Identities=26% Similarity=0.387 Sum_probs=174.0
Q ss_pred eeEeeCCEEEEcCCCCCCCCCCCCcc------------ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcE
Q 018671 19 KFKISYDKLVIALGAEASTFGIHGVK------------ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHC 86 (352)
Q Consensus 19 ~~~i~yD~LViAtGs~~~~~~ipG~~------------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 86 (352)
+.++.||+||||||+.|..|++||.. ++++++++++++.++++.+. ....++|
T Consensus 133 ~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~---------------~~~~~~v 197 (490)
T 2bc0_A 133 NHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLE---------------NKDIKRV 197 (490)
T ss_dssp EEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTT---------------STTCCEE
T ss_pred EEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhh---------------hcCCceE
Confidence 56799999999999999999999975 35677888888887765420 0123699
Q ss_pred EEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEE
Q 018671 87 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVD 163 (352)
Q Consensus 87 vVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~ 163 (352)
+|||||++|+|+|..|++++ .+|+++++. .+++ .+++++.+.+.+.|++.||+++++ +|++++
T Consensus 198 vVIGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 263 (490)
T 2bc0_A 198 AVVGAGYIGVELAEAFQRKG--------------KEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVA 263 (490)
T ss_dssp EEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEE
T ss_pred EEECCCHHHHHHHHHHHHCC--------------CeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEE
Confidence 99999999999999999887 899999997 6787 789999999999999999999999 899998
Q ss_pred CCe----EEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccC-CCCcCC
Q 018671 164 SQK----LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVL 237 (352)
Q Consensus 164 ~~~----v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~-~~~~~~ 237 (352)
.+. +.+ +|+++++|.||+|+|.+|+ ++++.. ++++++|+|.||+++|+ +.|+|||+|||+..+.+ .+....
T Consensus 264 ~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~ 340 (490)
T 2bc0_A 264 GNGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQET-SIPGVYAIGDCATIYDNATRDTNY 340 (490)
T ss_dssp CSSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEETTTTEEEC
T ss_pred cCCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCCccc-CCCCEEEeeeeEEeccccCCceee
Confidence 653 444 7789999999999999999 466666 77778899999999998 99999999999986532 233334
Q ss_pred CCchHHHHHHHHHHHHHHH
Q 018671 238 PALAQVAERQGKYLFSLLN 256 (352)
Q Consensus 238 ~~~~~~A~~qg~~~a~~i~ 256 (352)
+++++.|.+||+++|+||.
T Consensus 341 ~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 341 IALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHHhc
Confidence 6789999999999999985
No 13
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.97 E-value=2.2e-30 Score=257.38 Aligned_cols=209 Identities=28% Similarity=0.429 Sum_probs=180.6
Q ss_pred CeeEeeCCEEEEcCCCCCCCCCCCCc-cccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHH
Q 018671 18 WKFKISYDKLVIALGAEASTFGIHGV-KENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 96 (352)
Q Consensus 18 ~~~~i~yD~LViAtGs~~~~~~ipG~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~ 96 (352)
+..++.||+||||||+.|+.|++||. ..+.+.+++..++..+++.+. ....++|+|||||++|+
T Consensus 100 ~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~---------------~~~~~~vvViGgG~~g~ 164 (565)
T 3ntd_A 100 SEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQ---------------MNNVEHATVVGGGFIGL 164 (565)
T ss_dssp CEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHH---------------HTTCSEEEEECCSHHHH
T ss_pred CeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHh---------------hCCCCEEEEECCCHHHH
Confidence 34589999999999999999999998 356788888988887776542 12235999999999999
Q ss_pred HHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC----------
Q 018671 97 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS---------- 164 (352)
Q Consensus 97 e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~---------- 164 (352)
|+|..+++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.
T Consensus 165 e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~ 230 (565)
T 3ntd_A 165 EMMESLHHLG--------------IKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDA 230 (565)
T ss_dssp HHHHHHHHTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGG
T ss_pred HHHHHHHhcC--------------CcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccc
Confidence 9999999887 899999997 7889999999999999999999999998 7988865
Q ss_pred ----------C---eEEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEcccccccc
Q 018671 165 ----------Q---KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 230 (352)
Q Consensus 165 ----------~---~v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~ 230 (352)
+ .+.+++|+++++|.||+|+|.+|+ .+++.++++++++|+|.||+++|+ +.|+|||+|||+..++
T Consensus 231 ~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~ 309 (565)
T 3ntd_A 231 AGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQT-SDPAIYAVGDAVEEQD 309 (565)
T ss_dssp GTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBC-SSTTEEECGGGBCEEB
T ss_pred cccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCccc-CCCCEEEeeeeEeecc
Confidence 2 466788999999999999999999 577888999998999999999998 9999999999997665
Q ss_pred C-CCCcCCCCchHHHHHHHHHHHHHHH
Q 018671 231 S-TGKTVLPALAQVAERQGKYLFSLLN 256 (352)
Q Consensus 231 ~-~~~~~~~~~~~~A~~qg~~~a~~i~ 256 (352)
. .|....+++++.|.+||+++|+||.
T Consensus 310 ~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 310 FVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp TTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCceeecccHHHHHHHHHHHHHHhc
Confidence 3 2444467899999999999999986
No 14
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.97 E-value=4.5e-30 Score=248.21 Aligned_cols=206 Identities=27% Similarity=0.371 Sum_probs=177.0
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.++.||+||||||+.|+.|++||.+ ++++..++.+++..+++.+. ....++++|||||++|+|+
T Consensus 99 ~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~---------------~~~~~~vvViGgG~~g~E~ 163 (449)
T 3kd9_A 99 KSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYME---------------KYKVENVVIIGGGYIGIEM 163 (449)
T ss_dssp EEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHS---------------SSCCCEEEEECCSHHHHHH
T ss_pred EEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH---------------hcCCCeEEEECCCHHHHHH
Confidence 4799999999999999999999984 45677788888877765431 0134699999999999999
Q ss_pred HHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe---EEEcCC
Q 018671 99 SGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK---LILNDG 172 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~---v~~~~g 172 (352)
|..+++++ .+|+++++. ++++. +++++.+.+.+.+++. |+++.+ .|.+++.+. ..+.++
T Consensus 164 A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g 228 (449)
T 3kd9_A 164 AEAFAAQG--------------KNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDA 228 (449)
T ss_dssp HHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETT
T ss_pred HHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCC
Confidence 99999887 899999997 78887 9999999999999999 999999 799998753 356678
Q ss_pred cEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccC-CCCcCCCCchHHHHHHHHH
Q 018671 173 TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKY 250 (352)
Q Consensus 173 ~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~-~~~~~~~~~~~~A~~qg~~ 250 (352)
+++++|.||+|+|.+|+ ++++.++++++++|+|.||+++|+ +.|+|||+|||+..++. .|....+++++.|.+||++
T Consensus 229 ~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~ 307 (449)
T 3kd9_A 229 GEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQT-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYV 307 (449)
T ss_dssp EEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBC-SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHH
T ss_pred CEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCcc-CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHH
Confidence 89999999999999999 588888999999999999999998 99999999999986653 2444457899999999999
Q ss_pred HHHHHH
Q 018671 251 LFSLLN 256 (352)
Q Consensus 251 ~a~~i~ 256 (352)
+|+||.
T Consensus 308 aa~~i~ 313 (449)
T 3kd9_A 308 AGSNIA 313 (449)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999985
No 15
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=3.1e-31 Score=252.53 Aligned_cols=276 Identities=14% Similarity=0.148 Sum_probs=196.7
Q ss_pred eecccccc-ccCCCeeEeeCCEEEEcCCCCCCCCCCCCccc-----cCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHH
Q 018671 6 ETVTDELR-TLEPWKFKISYDKLVIALGAEASTFGIHGVKE-----NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 79 (352)
Q Consensus 6 ~~~~~~~~-~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~-----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 79 (352)
..++.+.+ +.+.++.++.||+||||||++++++++||+.+ ..+.+++.+++..+++.+...
T Consensus 78 ~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~------------- 144 (401)
T 3vrd_B 78 LGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESM------------- 144 (401)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHS-------------
T ss_pred EEEEccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhc-------------
Confidence 44554444 34566779999999999999999999999864 345678889999988876311
Q ss_pred hccCCcEEEEC------CChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-C--CCCCcHHHHHHHHHHHHhC
Q 018671 80 KSRLLHCVVVG------GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I--LSSFDDRLRHYATTQLSKS 150 (352)
Q Consensus 80 ~~~~~~vvVvG------gG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~--l~~~~~~~~~~~~~~l~~~ 150 (352)
.....+++++ ++..+.|++.+++++.+.. ..+.+|++++..+ + ++.+++.+.+.+.+.+++.
T Consensus 145 -~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~--------~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 215 (401)
T 3vrd_B 145 -DDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAH--------KSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENA 215 (401)
T ss_dssp -CTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHH--------CTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTC
T ss_pred -ccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhc--------CCCCEEEEEcccccccccccccHHHHHHHHHHHHhc
Confidence 1112344433 2456778888887765322 1237999999873 3 2445667777777778899
Q ss_pred CCEEEeC-ceEEEEC----CeEEEcCCcEEecceEEEecCCCcchhhhhcCCCCCCCCccccCCc-cccCCCCCEEEEcc
Q 018671 151 GVRLVRG-IVKDVDS----QKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEW-LRVPSVQDVFAVGD 224 (352)
Q Consensus 151 gV~v~~~-~V~~v~~----~~v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~l~~~~~G~i~Vd~~-l~~~~~~~IfaiGD 224 (352)
||+++++ +++.++. ..+.+++|+++++|+++|++|.+|+++++++++ .+++|+|.||++ ||.+++|||||+||
T Consensus 216 gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl-~~~~G~i~VD~~tl~~t~~p~VfAiGD 294 (401)
T 3vrd_B 216 LIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQSASL-TNDSGWCPVDIRTFESSLQPGIHVIGD 294 (401)
T ss_dssp SEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHHTTC-CCTTSSBCBCTTTCBBSSSTTEEECGG
T ss_pred CcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhhccc-cccCCCEEECCCcceecCCCCEEEecc
Confidence 9999998 6666653 268899999999999999999999999999998 477899999985 88889999999999
Q ss_pred ccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhhhCCCCCCCcccCCCCCCceeeccceEEE-ecCcceeeecccc--
Q 018671 225 CSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMAT-IGRYKALVDLRQN-- 301 (352)
Q Consensus 225 ~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~f~~~~~g~~~~-lG~~~av~~~~~~-- 301 (352)
|+.. .+.|++++.|.+||+++|+||.+.++ |+ ++ .|+.|...+.|.. .|....+...+..
T Consensus 295 va~~------~~~pk~a~~A~~qa~v~A~ni~~~l~---G~-------~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 357 (401)
T 3vrd_B 295 ACNA------APMPKSAYSANSQAKVAAAAVVALLK---GE-------EP-GTPSYLNTCYSILAPGYGISIAAVYRPNA 357 (401)
T ss_dssp GBCC------TTSCBSHHHHHHHHHHHHHHHHHHHH---TC-------CC-CCCCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cccC------CCCCchHHHHHHHHHHHHHHHHHHhc---CC-------CC-CCcccCCeEEEEEecCCceEEEEEecccC
Confidence 9852 35689999999999999999999887 32 22 5666766554422 2222211111100
Q ss_pred --------ccCCCeEeecHHHHHHHHHH
Q 018671 302 --------KESKGLSLAGFLSWLVWRSA 321 (352)
Q Consensus 302 --------~~~~~~~~~G~~~~~~~~~~ 321 (352)
....+....++..|++|+..
T Consensus 358 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (401)
T 3vrd_B 358 EGKAIEAVPDSGGITPVDAPDWVLEREV 385 (401)
T ss_dssp TSSSEEECTTCCEESCTTCCHHHHHHHH
T ss_pred CCceEEEecccCCcccccchhHHHhccc
Confidence 01133455677889888754
No 16
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.97 E-value=1.3e-30 Score=248.63 Aligned_cols=208 Identities=25% Similarity=0.438 Sum_probs=177.8
Q ss_pred cCCCeeEeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCCh
Q 018671 15 LEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGP 93 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~ 93 (352)
...++.++.||+||+|||+.|+.|++||.+ ++++.+++.+++..++..+ ...++++|||+|+
T Consensus 90 ~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~-----------------~~~~~vvViGgG~ 152 (404)
T 3fg2_P 90 LLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM-----------------PDKKHVVVIGAGF 152 (404)
T ss_dssp EESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG-----------------GGCSEEEEECCSH
T ss_pred EECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh-----------------hcCCeEEEECCCH
Confidence 345667899999999999999999999974 5678889999998877653 2235999999999
Q ss_pred HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----
Q 018671 94 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----- 165 (352)
Q Consensus 94 ~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----- 165 (352)
+|+|+|..+.+.+ .+|+++++. .+++ .+++.+.+.+.+.+++.||+++++ +|++++.+
T Consensus 153 ~g~e~A~~l~~~g--------------~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~ 218 (404)
T 3fg2_P 153 IGLEFAATARAKG--------------LEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVT 218 (404)
T ss_dssp HHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEE
T ss_pred HHHHHHHHHHhCC--------------CEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEE
Confidence 9999999999877 899999987 6665 478999999999999999999999 89998754
Q ss_pred eEEEcCCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccC-CCCcCCCCchHH
Q 018671 166 KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQV 243 (352)
Q Consensus 166 ~v~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~-~~~~~~~~~~~~ 243 (352)
.|.+++|+++++|.||+|+|.+|+. +++.++++.+ +| |.||+++|+ +.|+|||+|||+..+.+ .|....+.+++.
T Consensus 219 ~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~G-i~vd~~~~t-~~~~iya~GD~a~~~~~~~g~~~~~~~~~~ 295 (404)
T 3fg2_P 219 GVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTA-AG-IIVDQQLLT-SDPHISAIGDCALFESVRFGETMRVESVQN 295 (404)
T ss_dssp EEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EEECTTSBC-SSTTEEECGGGEEEEETTTTEEECCCSHHH
T ss_pred EEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCC-CC-EEECCCccc-CCCCEEEeecceeecCccCCceeeehHHHH
Confidence 5788999999999999999999995 8888898876 45 999999998 89999999999987653 233334567899
Q ss_pred HHHHHHHHHHHHH
Q 018671 244 AERQGKYLFSLLN 256 (352)
Q Consensus 244 A~~qg~~~a~~i~ 256 (352)
|..||+.+|+||.
T Consensus 296 A~~qg~~aa~~i~ 308 (404)
T 3fg2_P 296 ATDQARCVAARLT 308 (404)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999985
No 17
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.97 E-value=2.7e-30 Score=251.34 Aligned_cols=207 Identities=29% Similarity=0.454 Sum_probs=178.9
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.++.||+||||||+.|..|++||.. ++.+.+++.+++..+++.+. ....++++|||+|++|+|+
T Consensus 110 ~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~---------------~~~~~~vvViGgG~~g~e~ 174 (472)
T 3iwa_A 110 RTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAIS---------------AGEVSKAVIVGGGFIGLEM 174 (472)
T ss_dssp EEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCC---------------TTSCSEEEEECCSHHHHHH
T ss_pred EEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhh---------------cCCCCEEEEECCCHHHHHH
Confidence 4899999999999999999999983 56677888888877765431 0123599999999999999
Q ss_pred HHHHHHh-HhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC-C-e--EEEc
Q 018671 99 SGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS-Q-K--LILN 170 (352)
Q Consensus 99 A~~l~~~-~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~-~-~--v~~~ 170 (352)
|..++++ + .+|+++++. .+++ .+++++.+.+.+.+++.||+++++ +|++++. + . +.++
T Consensus 175 A~~l~~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~ 240 (472)
T 3iwa_A 175 AVSLADMWG--------------IDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVIT 240 (472)
T ss_dssp HHHHHHHHC--------------CEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE
T ss_pred HHHHHHhcC--------------CcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEe
Confidence 9999987 6 899999987 7888 899999999999999999999999 8999976 3 2 6778
Q ss_pred CCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCC-CCcCCCCchHHHHHHH
Q 018671 171 DGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST-GKTVLPALAQVAERQG 248 (352)
Q Consensus 171 ~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~-~~~~~~~~~~~A~~qg 248 (352)
+|+++++|.||+|+|.+|+ .+++.++++++++|+|.||+++|+ +.|+|||+|||+..+... |....+++++.|.+||
T Consensus 241 ~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g 319 (472)
T 3iwa_A 241 DKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQG 319 (472)
T ss_dssp SSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHH
T ss_pred CCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCccc-CCCCEEEeccceecccccCCceeecchHHHHHHHH
Confidence 9999999999999999998 577888999988999999999998 999999999999876543 4344578999999999
Q ss_pred HHHHHHHH
Q 018671 249 KYLFSLLN 256 (352)
Q Consensus 249 ~~~a~~i~ 256 (352)
+++|+||.
T Consensus 320 ~~aa~~i~ 327 (472)
T 3iwa_A 320 RVIGTNLA 327 (472)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999985
No 18
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=2.5e-30 Score=250.27 Aligned_cols=205 Identities=25% Similarity=0.391 Sum_probs=174.0
Q ss_pred eeEeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 19 KFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 19 ~~~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
+.++.||+||||||+.|..|++||.. ++++++++++++.++++.. ...++++|||+|++|+|
T Consensus 101 ~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~-----------------~~~~~vvViGgG~~g~E 163 (452)
T 2cdu_A 101 EKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA-----------------PKAKTITIIGSGYIGAE 163 (452)
T ss_dssp EEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG-----------------GGCSEEEEECCSHHHHH
T ss_pred eEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh-----------------ccCCeEEEECcCHHHHH
Confidence 56899999999999999999999985 4677888998888776542 22359999999999999
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--CeE--EEc
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QKL--ILN 170 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~v--~~~ 170 (352)
+|..+++++ .+|+++++. .+++ .+++++.+.+.+.|++.||+++++ +|++++. +.+ ...
T Consensus 164 ~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~ 229 (452)
T 2cdu_A 164 LAEAYSNQN--------------YNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL 229 (452)
T ss_dssp HHHHHHTTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET
T ss_pred HHHHHHhcC--------------CEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe
Confidence 999998876 899999987 6787 789999999999999999999999 8999875 333 234
Q ss_pred CCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccC-CCCcCCCCchHHHHHHH
Q 018671 171 DGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQG 248 (352)
Q Consensus 171 ~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~-~~~~~~~~~~~~A~~qg 248 (352)
+|+++++|.||+|+|.+|+. +++.. ++++++|+|.||+++|+ +.|+|||+|||+..+.+ .+....+++++.|.+||
T Consensus 230 ~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g 307 (452)
T 2cdu_A 230 DGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQG 307 (452)
T ss_dssp TSCEEEESEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHH
T ss_pred CCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCc-CCCCEEEcceEEEeccccCCCeeecchHHHHHHHH
Confidence 78899999999999999994 66666 77788899999999998 99999999999986542 22233467899999999
Q ss_pred HHHHHHHH
Q 018671 249 KYLFSLLN 256 (352)
Q Consensus 249 ~~~a~~i~ 256 (352)
+++|+||.
T Consensus 308 ~~aa~~i~ 315 (452)
T 2cdu_A 308 RLVGLNLT 315 (452)
T ss_dssp HHHHHTSS
T ss_pred HHHHHHhC
Confidence 99999885
No 19
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=1.2e-29 Score=247.22 Aligned_cols=206 Identities=22% Similarity=0.404 Sum_probs=175.3
Q ss_pred EeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 21 KISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 21 ~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
++.||+||||||+.|+.|++||.+ ++++.+++.+++.++++.+. ....++|+|||||++|+|+|
T Consensus 138 ~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~---------------~~~~~~vvViGgG~~g~e~A 202 (480)
T 3cgb_A 138 EFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLE---------------TNKVEDVTIIGGGAIGLEMA 202 (480)
T ss_dssp EEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHH---------------SSCCCEEEEECCHHHHHHHH
T ss_pred EEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhh---------------hcCCCeEEEECCCHHHHHHH
Confidence 799999999999999999999984 46778889999888876542 01235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe-E--EEcCCcE
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK-L--ILNDGTE 174 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~-v--~~~~g~~ 174 (352)
..+++++ .+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|++++.+. + ...++.+
T Consensus 203 ~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~ 268 (480)
T 3cgb_A 203 ETFVELG--------------KKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGT 268 (480)
T ss_dssp HHHHHTT--------------CEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEE
T ss_pred HHHHhcC--------------CeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCE
Confidence 9999877 899999997 7888899999999999999999999998 899987642 2 2334568
Q ss_pred EecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCC-CCcCCCCchHHHHHHHHHHH
Q 018671 175 VPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST-GKTVLPALAQVAERQGKYLF 252 (352)
Q Consensus 175 i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~-~~~~~~~~~~~A~~qg~~~a 252 (352)
+++|.||+|+|.+|+ ++++.++++++++|+|.||+++|+ +.|+|||+|||+..+... |....+++++.|.+||+++|
T Consensus 269 i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa 347 (480)
T 3cgb_A 269 YKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAG 347 (480)
T ss_dssp EECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHH
T ss_pred EEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccC-CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHH
Confidence 999999999999998 488888898888899999999998 899999999999765432 33334678999999999999
Q ss_pred HHHH
Q 018671 253 SLLN 256 (352)
Q Consensus 253 ~~i~ 256 (352)
+||.
T Consensus 348 ~~i~ 351 (480)
T 3cgb_A 348 LNML 351 (480)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9985
No 20
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.97 E-value=1.2e-29 Score=253.29 Aligned_cols=208 Identities=26% Similarity=0.415 Sum_probs=182.1
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCc--cccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGV--KENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~--~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
.++.||+||||||+.|..|++||. .++.+..+++.++..++..+.. ...++++|||||++|+|
T Consensus 137 ~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~---------------~~~~~vvViGgG~~g~e 201 (588)
T 3ics_A 137 YNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE---------------KKPRHATVIGGGFIGVE 201 (588)
T ss_dssp EEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHH---------------HCCSEEEEECCSHHHHH
T ss_pred EEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhh---------------cCCCeEEEECCCHHHHH
Confidence 378999999999999999999998 2456788889888887766521 12359999999999999
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--CeEEEcCCc
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QKLILNDGT 173 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~v~~~~g~ 173 (352)
+|..+++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++. +.|.+++|+
T Consensus 202 ~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~ 267 (588)
T 3ics_A 202 MVENLRERG--------------IEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGS 267 (588)
T ss_dssp HHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSC
T ss_pred HHHHHHhCC--------------CeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCC
Confidence 999999887 899999987 7888899999999999999999999998 8999987 579999999
Q ss_pred EEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCC-CCcCCCCchHHHHHHHHHH
Q 018671 174 EVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST-GKTVLPALAQVAERQGKYL 251 (352)
Q Consensus 174 ~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~-~~~~~~~~~~~A~~qg~~~ 251 (352)
++++|.||+|+|.+|+. +++.++++++++|+|.||+++|+ +.|+|||+|||+..++.. |....+++++.|..||+++
T Consensus 268 ~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~a 346 (588)
T 3ics_A 268 VIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRML 346 (588)
T ss_dssp EEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHH
T ss_pred EEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCcccc-CCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHH
Confidence 99999999999999994 88888999988999999999998 999999999999766532 4444678999999999999
Q ss_pred HHHHHH
Q 018671 252 FSLLNR 257 (352)
Q Consensus 252 a~~i~~ 257 (352)
|+||..
T Consensus 347 a~~i~g 352 (588)
T 3ics_A 347 ADIIHG 352 (588)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 999853
No 21
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=8e-30 Score=241.60 Aligned_cols=204 Identities=22% Similarity=0.326 Sum_probs=172.1
Q ss_pred ccCCCeeEeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC
Q 018671 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG 92 (352)
Q Consensus 14 ~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG 92 (352)
.+..++.++.||+||||||+.|..|++||.. +++++.+++.++.+++..+. ..++++|||+|
T Consensus 92 ~v~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~-----------------~~~~v~ViGgG 154 (384)
T 2v3a_A 92 RIWIGEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAA-----------------GKRRVLLLGAG 154 (384)
T ss_dssp EEEETTEEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHT-----------------TCCEEEEECCS
T ss_pred EEEECCcEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhc-----------------cCCeEEEECCC
Confidence 3333345799999999999999999999975 56788899988887766541 23599999999
Q ss_pred hHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----
Q 018671 93 PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---- 165 (352)
Q Consensus 93 ~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~---- 165 (352)
++|+|+|..+++++ .+|+++++. .+++. +++++.+.+.+.+++.||+++++ +|++++.+
T Consensus 155 ~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~ 220 (384)
T 2v3a_A 155 LIGCEFANDLSSGG--------------YQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGL 220 (384)
T ss_dssp HHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHhCC--------------CeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEE
Confidence 99999999999887 899999987 67776 48899999999999999999999 79988643
Q ss_pred eEEEcCCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHH
Q 018671 166 KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244 (352)
Q Consensus 166 ~v~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A 244 (352)
.+.+++|+++++|.||+|+|.+|+. +++.++++.+ +| |.||+++|+ +.|+|||+|||+.... ...+.+..|
T Consensus 221 ~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~-~g-i~vd~~~~t-~~~~IyA~GD~~~~~~-----~~~~~~~~a 292 (384)
T 2v3a_A 221 EAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN-RG-IVVDRSLRT-SHANIYALGDCAEVDG-----LNLLYVMPL 292 (384)
T ss_dssp EEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBS-SS-EEECTTCBC-SSTTEEECGGGEEETT-----BCCCSHHHH
T ss_pred EEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCC-CC-EEECCCCCC-CCCCEEEeeeeeeECC-----CCcchHHHH
Confidence 5777899999999999999999995 8888899887 57 999999997 9999999999996421 113457789
Q ss_pred HHHHHHHHHHHH
Q 018671 245 ERQGKYLFSLLN 256 (352)
Q Consensus 245 ~~qg~~~a~~i~ 256 (352)
.+||+++|+||.
T Consensus 293 ~~~g~~~a~~i~ 304 (384)
T 2v3a_A 293 MACARALAQTLA 304 (384)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999999985
No 22
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=5e-30 Score=246.57 Aligned_cols=207 Identities=26% Similarity=0.379 Sum_probs=173.4
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCcc-cc---CcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECC
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVK-EN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 91 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~-~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGg 91 (352)
..++.++.||+||+|||+.|+.|++||.. ++ ++.+++.+++.++++.+ ...++|+||||
T Consensus 95 ~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l-----------------~~~~~vvViGg 157 (431)
T 1q1r_A 95 LSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL-----------------IADNRLVVIGG 157 (431)
T ss_dssp ETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC-----------------CTTCEEEEECC
T ss_pred ECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh-----------------hcCCeEEEECC
Confidence 34566899999999999999999999974 34 67788999887776542 12359999999
Q ss_pred ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC----
Q 018671 92 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-IVKDVDS---- 164 (352)
Q Consensus 92 G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~---- 164 (352)
|++|+|+|..|++++ .+|+++++. .+++. +++++.+.+.+.+++.||+++++ +|++++.
T Consensus 158 G~~g~E~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~ 223 (431)
T 1q1r_A 158 GYIGLEVAATAIKAN--------------MHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ 223 (431)
T ss_dssp SHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT
T ss_pred CHHHHHHHHHHHhCC--------------CEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC
Confidence 999999999999887 899999987 67764 88999999999999999999999 8999875
Q ss_pred C---eEEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCC-CCcCCCC
Q 018671 165 Q---KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST-GKTVLPA 239 (352)
Q Consensus 165 ~---~v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~-~~~~~~~ 239 (352)
+ .|.+++|+++++|.||+|+|.+|+ ++++.++++.+ +| |.||+++|+ +.|+|||+|||+..+.+. |......
T Consensus 224 ~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~t-s~~~IyA~GD~~~~~~~~~g~~~~~~ 300 (431)
T 1q1r_A 224 QKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NG-IVINEHMQT-SDPLIMAVGDCARFHSQLYDRWVRIE 300 (431)
T ss_dssp CCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EECCTTSBC-SSTTEEECGGGEEEEETTTTEEEECC
T ss_pred CcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CC-EEECCCccc-CCCCEEEEEeEEEEccccCCceEeeC
Confidence 2 477889999999999999999998 58888898876 45 999999998 899999999999865432 2222245
Q ss_pred chHHHHHHHHHHHHHHH
Q 018671 240 LAQVAERQGKYLFSLLN 256 (352)
Q Consensus 240 ~~~~A~~qg~~~a~~i~ 256 (352)
+++.|.+||+.+|+||.
T Consensus 301 ~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 301 SVPNALEQARKIAAILC 317 (431)
T ss_dssp SHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 78899999999999985
No 23
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.97 E-value=9.6e-30 Score=246.14 Aligned_cols=207 Identities=24% Similarity=0.336 Sum_probs=167.3
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
.+++.++.||+||||||+.|..|++||.. ++.+..++++++..+++.. ...++++|||+|++
T Consensus 96 ~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~-----------------~~~~~vvViGgG~~ 158 (452)
T 3oc4_A 96 KEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL-----------------ENSQTVAVIGAGPI 158 (452)
T ss_dssp TTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH-----------------HTCSEEEEECCSHH
T ss_pred cCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH-----------------hcCCEEEEECCCHH
Confidence 34677899999999999999999999985 3556666666665544332 12359999999999
Q ss_pred HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CcHHHHHHHHHHHHhCCCEEEeC-ceEEEE--CCe--E
Q 018671 95 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-IVKDVD--SQK--L 167 (352)
Q Consensus 95 g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~--~~~--v 167 (352)
|+|+|..+++++ .+|+++++. .+++. +++++.+.+.+.|++.||+++++ +|++++ ++. |
T Consensus 159 g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v 224 (452)
T 3oc4_A 159 GMEAIDFLVKMK--------------KTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVL 224 (452)
T ss_dssp HHHHHHHHHHTT--------------CEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEE
T ss_pred HHHHHHHHHhCC--------------CeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEE
Confidence 999999999887 899999987 67875 89999999999999999999999 899997 333 5
Q ss_pred EEcCCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEcccccccc-CCCCcCCCCchHHHH
Q 018671 168 ILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVAE 245 (352)
Q Consensus 168 ~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~-~~~~~~~~~~~~~A~ 245 (352)
.+++| ++++|.||+|+|.+|+. ++... ++++++|+|.||+++|+ +.|+|||+|||+..+. +.+....+++++.|.
T Consensus 225 ~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~ 301 (452)
T 3oc4_A 225 ETSEQ-EISCDSGIFALNLHPQLAYLDKK-IQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMNEPVAETFYAPLVNNAV 301 (452)
T ss_dssp EESSC-EEEESEEEECSCCBCCCSSCCTT-SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEEGGGTEEECCCCHHHHH
T ss_pred EECCC-EEEeCEEEECcCCCCChHHHHhh-hccCCCCCEEECcCccC-CCCCEEEEEeeEEeccccCCceeecchHHHHH
Confidence 56666 89999999999999995 55443 77788899999999998 8999999999997543 123333467899999
Q ss_pred HHHHHHHHHHH
Q 018671 246 RQGKYLFSLLN 256 (352)
Q Consensus 246 ~qg~~~a~~i~ 256 (352)
.||+++|+||.
T Consensus 302 ~~g~~aa~~i~ 312 (452)
T 3oc4_A 302 RTGLVVANNLE 312 (452)
T ss_dssp HHHHHHTTSSS
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 24
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=2.4e-29 Score=243.00 Aligned_cols=204 Identities=28% Similarity=0.424 Sum_probs=171.1
Q ss_pred EeeCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 21 KISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 21 ~i~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
+++||+||||||+.|..|++||.+ ++++++++.+++.++++.+. . ...++++|||+|++|+|+|
T Consensus 101 ~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~------~---------~~~~~vvIiG~G~~g~e~A 165 (447)
T 1nhp_A 101 VENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTV------D---------PEVNNVVVIGSGYIGIEAA 165 (447)
T ss_dssp EEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHT------C---------TTCCEEEEECCSHHHHHHH
T ss_pred EEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhh------h---------cCCCeEEEECCCHHHHHHH
Confidence 589999999999999999999985 46777888888887766541 0 1235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe----EEEcCC
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK----LILNDG 172 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~----v~~~~g 172 (352)
..+++++ .+|+++++. .+++ .+++++.+.+.+.+++.||+++++ +|++++.+. +.+ ++
T Consensus 166 ~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~ 230 (447)
T 1nhp_A 166 EAFAKAG--------------KKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DK 230 (447)
T ss_dssp HHHHHTT--------------CEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SS
T ss_pred HHHHHCC--------------CeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CC
Confidence 9999877 899999997 6777 689999999999999999999998 899998652 444 56
Q ss_pred cEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccC-CCCcCCCCchHHHHHHHHH
Q 018671 173 TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKY 250 (352)
Q Consensus 173 ~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~-~~~~~~~~~~~~A~~qg~~ 250 (352)
+++++|.||+|+|.+|+ ++++.. ++.+++|+|.||+++|+ +.|+|||+|||+..+.+ .+....+++++.|.+||++
T Consensus 231 ~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~ 308 (447)
T 1nhp_A 231 NAYDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRF 308 (447)
T ss_dssp CEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBC-SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHH
T ss_pred CEEECCEEEECcCCCCChHHHHhh-hhhcCCCcEEECccccC-CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHH
Confidence 78999999999999998 466666 77778899999999998 89999999999975432 1222346789999999999
Q ss_pred HHHHHH
Q 018671 251 LFSLLN 256 (352)
Q Consensus 251 ~a~~i~ 256 (352)
+|+||.
T Consensus 309 aa~~i~ 314 (447)
T 1nhp_A 309 AVKNLE 314 (447)
T ss_dssp HHHTSS
T ss_pred HHHhhc
Confidence 999885
No 25
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.96 E-value=7.6e-30 Score=249.29 Aligned_cols=213 Identities=18% Similarity=0.246 Sum_probs=172.0
Q ss_pred cCCCeeEeeCCEEEEcCCCCCCCCCCCCc-----cccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEE
Q 018671 15 LEPWKFKISYDKLVIALGAEASTFGIHGV-----KENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVV 89 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtGs~~~~~~ipG~-----~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVv 89 (352)
...++.++.||+||||||++|+.++++|. .++++.+++.+++..++..+. ..++|+||
T Consensus 124 ~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~-----------------~~~~vvVi 186 (493)
T 1m6i_A 124 KLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISR-----------------EVKSITII 186 (493)
T ss_dssp EETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHH-----------------HCSEEEEE
T ss_pred EECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhh-----------------cCCeEEEE
Confidence 34456789999999999999988766552 245677889999888776542 23599999
Q ss_pred CCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC-CCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--
Q 018671 90 GGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL-SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS-- 164 (352)
Q Consensus 90 GgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l-~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~-- 164 (352)
|||++|+|+|..|++.+++. +.+|+++++. .++ ..+++.+.+.+.+.+++.||+++++ +|++++.
T Consensus 187 GgG~iG~E~A~~l~~~~~~~----------g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~ 256 (493)
T 1m6i_A 187 GGGFLGSELACALGRKARAL----------GTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS 256 (493)
T ss_dssp CCSHHHHHHHHHHHHHHHHH----------TCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEET
T ss_pred CCCHHHHHHHHHHHhhhhhc----------CCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC
Confidence 99999999999998865220 2789999886 444 4578899999999999999999999 8999864
Q ss_pred C--eEEEcCCcEEecceEEEecCCCcch-hhhhcCCCCCC-CCccccCCccccCCCCCEEEEccccccccCCCCcCCCCc
Q 018671 165 Q--KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 240 (352)
Q Consensus 165 ~--~v~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~-~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~ 240 (352)
+ .|.+++|+++++|.||+|+|.+|+. +++.+++++++ +|+|.||++||+ .|+|||+|||+..+++..+.....+
T Consensus 257 ~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~~~g~~~~~~ 334 (493)
T 1m6i_A 257 GKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEH 334 (493)
T ss_dssp TEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEEETTTEEECCCC
T ss_pred CeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc--CCCeeEeeeeEeccCcccCccccch
Confidence 3 4778899999999999999999995 88888988875 688999999997 5999999999987653222224557
Q ss_pred hHHHHHHHHHHHHHHH
Q 018671 241 AQVAERQGKYLFSLLN 256 (352)
Q Consensus 241 ~~~A~~qg~~~a~~i~ 256 (352)
++.|..||+.+|+||.
T Consensus 335 ~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 335 HDHAVVSGRLAGENMT 350 (493)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8899999999999985
No 26
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.96 E-value=3.9e-29 Score=244.37 Aligned_cols=190 Identities=26% Similarity=0.423 Sum_probs=162.6
Q ss_pred eeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 19 ~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
+.++.||+||||||++|..|++||. ++++ +.+++.. ... ..++++|||||++|+|+
T Consensus 151 ~~~~~~d~lViATGs~p~~p~i~G~-~~~~---~~~~~~~----------~~~----------~~~~vvViGgG~ig~E~ 206 (495)
T 2wpf_A 151 KERLQADHILLATGSWPQMPAIPGI-EHCI---SSNEAFY----------LPE----------PPRRVLTVGGGFISVEF 206 (495)
T ss_dssp EEEEEEEEEEECCCEEECCCCCTTG-GGCE---EHHHHTT----------CSS----------CCSEEEEECSSHHHHHH
T ss_pred CeEEEcCEEEEeCCCCcCCCCCCCc-cccc---cHHHHHh----------hhh----------cCCeEEEECCCHHHHHH
Confidence 6689999999999999999999997 3322 2333211 111 23599999999999999
Q ss_pred HHHHHHh---HhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEE
Q 018671 99 SGELSDF---IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLI 168 (352)
Q Consensus 99 A~~l~~~---~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~ 168 (352)
|..|+++ + .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .|.
T Consensus 207 A~~l~~~~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~ 272 (495)
T 2wpf_A 207 AGIFNAYKPPG--------------GKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVT 272 (495)
T ss_dssp HHHHHHHCCTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEE
T ss_pred HHHHHhhCCCC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEE
Confidence 9999987 5 899999997 7889999999999999999999999999 89998753 477
Q ss_pred EcCCcEEecceEEEecCCCcch--h-hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 169 LNDGTEVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 169 ~~~g~~i~~D~vi~a~G~~~~~--~-~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
+++|+++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.. +++++.|.
T Consensus 273 ~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~---------~~l~~~A~ 342 (495)
T 2wpf_A 273 FESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITDR---------LMLTPVAI 342 (495)
T ss_dssp ETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGCS---------CCCHHHHH
T ss_pred ECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCC---------ccCHHHHH
Confidence 7899899999999999999994 3 5778898888899999999998 99999999999951 67899999
Q ss_pred HHHHHHHHHHH
Q 018671 246 RQGKYLFSLLN 256 (352)
Q Consensus 246 ~qg~~~a~~i~ 256 (352)
.||+++|.||.
T Consensus 343 ~~g~~aa~~i~ 353 (495)
T 2wpf_A 343 NEGAALVDTVF 353 (495)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999986
No 27
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=1.5e-28 Score=240.73 Aligned_cols=198 Identities=23% Similarity=0.334 Sum_probs=159.8
Q ss_pred eeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 19 ~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
+.++.||+||||||+.|..|++||. ++++ +.+++.. ... .++++|||||++|+|+
T Consensus 137 ~~~~~~d~lViAtGs~p~~p~i~G~-~~~~---~~~~~~~----------~~~-----------~~~vvViGgG~ig~E~ 191 (500)
T 1onf_A 137 EEILEGRNILIAVGNKPVFPPVKGI-ENTI---SSDEFFN----------IKE-----------SKKIGIVGSGYIAVEL 191 (500)
T ss_dssp ----CBSSEEECCCCCBCCCSCTTG-GGCE---EHHHHTT----------CCC-----------CSEEEEECCSHHHHHH
T ss_pred ceEEEeCEEEECCCCCCCCCCCCCC-Cccc---CHHHHhc----------cCC-----------CCeEEEECChHHHHHH
Confidence 4679999999999999999999997 3322 2232211 111 3599999999999999
Q ss_pred HHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEEEcC
Q 018671 99 SGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILND 171 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~~ 171 (352)
|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .+.+++
T Consensus 192 A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~ 257 (500)
T 1onf_A 192 INVIKRLG--------------IDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSD 257 (500)
T ss_dssp HHHHHTTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETT
T ss_pred HHHHHHcC--------------CeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECC
Confidence 99999877 899999997 7889999999999999999999999999 89999753 467788
Q ss_pred CcE-EecceEEEecCCCcch--h-hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccC----------------
Q 018671 172 GTE-VPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES---------------- 231 (352)
Q Consensus 172 g~~-i~~D~vi~a~G~~~~~--~-~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~---------------- 231 (352)
|++ +++|.||+|+|.+|+. + ++.++++. ++|+|.||+++|+ +.|+|||+|||+.++++
T Consensus 258 g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~ 335 (500)
T 1onf_A 258 GRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRT-SVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEER 335 (500)
T ss_dssp SCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBC-SSSSEEECSTTEEEC------------------
T ss_pred CcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCccc-CCCCEEEEecccccccccccccccccccccccc
Confidence 988 9999999999999995 3 57788888 7899999999997 99999999999954211
Q ss_pred --------CC-CcCCCCchHHHHHHHHHHHHHHHH
Q 018671 232 --------TG-KTVLPALAQVAERQGKYLFSLLNR 257 (352)
Q Consensus 232 --------~~-~~~~~~~~~~A~~qg~~~a~~i~~ 257 (352)
.+ ....+++++.|.+||+++|+||..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 336 YLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp ------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred ccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 00 002478899999999999999863
No 28
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.96 E-value=2.6e-28 Score=238.30 Aligned_cols=190 Identities=23% Similarity=0.396 Sum_probs=162.7
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|..|++||. +++ .+.+++.. ... ..++++|||||++|+|+|
T Consensus 148 ~~~~~d~lviAtGs~p~~p~i~g~-~~~---~~~~~~~~----------~~~----------~~~~vvViGgG~ig~E~A 203 (490)
T 1fec_A 148 ETLDTEYILLATGSWPQHLGIEGD-DLC---ITSNEAFY----------LDE----------APKRALCVGGGYISIEFA 203 (490)
T ss_dssp EEEEEEEEEECCCEEECCCCSBTG-GGC---BCHHHHTT----------CSS----------CCSEEEEECSSHHHHHHH
T ss_pred EEEEcCEEEEeCCCCCCCCCCCCc-cce---ecHHHHhh----------hhh----------cCCeEEEECCCHHHHHHH
Confidence 689999999999999999999997 333 23333321 111 235999999999999999
Q ss_pred HHHHHh---HhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEEE
Q 018671 100 GELSDF---IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLIL 169 (352)
Q Consensus 100 ~~l~~~---~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~ 169 (352)
..++++ + .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .|.+
T Consensus 204 ~~l~~~~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~ 269 (490)
T 1fec_A 204 GIFNAYKARG--------------GQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVF 269 (490)
T ss_dssp HHHHHHSCTT--------------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEE
T ss_pred HHHHhhccCc--------------CeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEE
Confidence 999987 5 899999997 7889999999999999999999999999 89998753 4677
Q ss_pred cCCcEEecceEEEecCCCcch--h-hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHH
Q 018671 170 NDGTEVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246 (352)
Q Consensus 170 ~~g~~i~~D~vi~a~G~~~~~--~-~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~ 246 (352)
++|+++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.. +++++.|.+
T Consensus 270 ~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~---------~~l~~~A~~ 339 (490)
T 1fec_A 270 ESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTDR---------VMLTPVAIN 339 (490)
T ss_dssp TTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGCS---------CCCHHHHHH
T ss_pred CCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCC---------ccCHHHHHH
Confidence 889899999999999999995 4 6788999888899999999998 99999999999951 678999999
Q ss_pred HHHHHHHHHHH
Q 018671 247 QGKYLFSLLNR 257 (352)
Q Consensus 247 qg~~~a~~i~~ 257 (352)
||+++|+||..
T Consensus 340 ~g~~aa~~i~g 350 (490)
T 1fec_A 340 EGAAFVDTVFA 350 (490)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhcC
Confidence 99999999863
No 29
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.96 E-value=8.3e-29 Score=240.95 Aligned_cols=192 Identities=22% Similarity=0.307 Sum_probs=160.6
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|..|++||..+. .+.+.+++.. ... ..++++|||||++|+|+|
T Consensus 137 ~~~~~d~lViAtGs~p~~p~i~g~~~~--~v~t~~~~~~----------~~~----------~~~~vvViGgG~~g~E~A 194 (474)
T 1zmd_A 137 QVIDTKNILIATGSEVTPFPGITIDED--TIVSSTGALS----------LKK----------VPEKMVVIGAGVIGVELG 194 (474)
T ss_dssp EEEEEEEEEECCCEEECCCTTCCCCSS--SEECHHHHTT----------CSS----------CCSEEEEECCSHHHHHHH
T ss_pred EEEEeCEEEECCCCCCCCCCCCCCCcC--cEEcHHHHhh----------ccc----------cCceEEEECCCHHHHHHH
Confidence 579999999999999999999997432 1223333321 111 225999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC--e-EEE----
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K-LIL---- 169 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~-v~~---- 169 (352)
..|++++ .+|+++++. .+++ .+++++.+.+.+.|++.||+++++ +|++++.+ . +.+
T Consensus 195 ~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~ 260 (474)
T 1zmd_A 195 SVWQRLG--------------ADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEA 260 (474)
T ss_dssp HHHHHTT--------------CEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHcC--------------CEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEe
Confidence 9999887 899999997 7888 899999999999999999999999 89999753 2 443
Q ss_pred ---cCCcEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHH
Q 018671 170 ---NDGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243 (352)
Q Consensus 170 ---~~g~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~ 243 (352)
.+++++++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+.. +++++.
T Consensus 261 ~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~ 330 (474)
T 1zmd_A 261 ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVAG---------PMLAHK 330 (474)
T ss_dssp TTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSSS---------CCCHHH
T ss_pred cCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeecCCC---------CccHHH
Confidence 356789999999999999995 4 6788998888899999999997 99999999999962 678899
Q ss_pred HHHHHHHHHHHHHH
Q 018671 244 AERQGKYLFSLLNR 257 (352)
Q Consensus 244 A~~qg~~~a~~i~~ 257 (352)
|.+||+++|+||..
T Consensus 331 A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 331 AEDEGIICVEGMAG 344 (474)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999853
No 30
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.96 E-value=4.4e-29 Score=241.33 Aligned_cols=192 Identities=27% Similarity=0.376 Sum_probs=163.6
Q ss_pred CeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 18 ~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
++.++.||+||||||+.|..|++||. +++ .+.+++.. ... ..++++|||||++|+|
T Consensus 126 ~g~~~~~d~lviAtGs~p~~p~i~g~-~~~---~~~~~~~~----------~~~----------~~~~vvViGgG~~g~e 181 (450)
T 1ges_A 126 NGETITADHILIATGGRPSHPDIPGV-EYG---IDSDGFFA----------LPA----------LPERVAVVGAGYIGVE 181 (450)
T ss_dssp TTEEEEEEEEEECCCEEECCCCSTTG-GGS---BCHHHHHH----------CSS----------CCSEEEEECCSHHHHH
T ss_pred CCEEEEeCEEEECCCCCCCCCCCCCc-cce---ecHHHhhh----------hhh----------cCCeEEEECCCHHHHH
Confidence 45689999999999999999999997 332 23343322 111 2359999999999999
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEEEc
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN 170 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~ 170 (352)
+|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .+.++
T Consensus 182 ~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~ 247 (450)
T 1ges_A 182 LGGVINGLG--------------AKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELE 247 (450)
T ss_dssp HHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEET
T ss_pred HHHHHHhcC--------------CEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEEC
Confidence 999999887 899999997 7889999999999999999999999999 89998753 47778
Q ss_pred CCcEEecceEEEecCCCcch--h-hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHH
Q 018671 171 DGTEVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247 (352)
Q Consensus 171 ~g~~i~~D~vi~a~G~~~~~--~-~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~q 247 (352)
+|+++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.. ++.++.|.+|
T Consensus 248 ~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~~~ 317 (450)
T 1ges_A 248 DGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGA---------VELTPVAVAA 317 (450)
T ss_dssp TSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTS---------CCCHHHHHHH
T ss_pred CCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCC---------CccHHHHHHH
Confidence 99899999999999999994 3 5778999888999999999997 99999999999852 6788999999
Q ss_pred HHHHHHHHHH
Q 018671 248 GKYLFSLLNR 257 (352)
Q Consensus 248 g~~~a~~i~~ 257 (352)
|+.+|+||..
T Consensus 318 g~~aa~~i~~ 327 (450)
T 1ges_A 318 GRRLSERLFN 327 (450)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999863
No 31
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.1e-29 Score=240.96 Aligned_cols=189 Identities=23% Similarity=0.363 Sum_probs=161.9
Q ss_pred EeeCCEEEEcCCCCCCCC-CCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 21 KISYDKLVIALGAEASTF-GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 21 ~i~yD~LViAtGs~~~~~-~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
++.||+||||||+.|..| ++||. ++++ +.++... ... ..++++|||||++|+|+|
T Consensus 146 ~~~~d~lviAtGs~p~~p~~i~g~-~~~~---~~~~~~~----------l~~----------~~~~vvViGgG~ig~E~A 201 (479)
T 2hqm_A 146 VYSANHILVATGGKAIFPENIPGF-ELGT---DSDGFFR----------LEE----------QPKKVVVVGAGYIGIELA 201 (479)
T ss_dssp EEEEEEEEECCCEEECCCTTSTTG-GGSB---CHHHHHH----------CSS----------CCSEEEEECSSHHHHHHH
T ss_pred EEEeCEEEEcCCCCCCCCCCCCCc-cccc---chHHHhc----------ccc----------cCCeEEEECCCHHHHHHH
Confidence 799999999999999999 89997 3322 2333322 111 235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC------eEEEcC
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ------KLILND 171 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~------~v~~~~ 171 (352)
..|++++ .+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|++++.+ .|.+++
T Consensus 202 ~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~ 267 (479)
T 2hqm_A 202 GVFHGLG--------------SETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMND 267 (479)
T ss_dssp HHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETT
T ss_pred HHHHHcC--------------CceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECC
Confidence 9999887 899999997 7889999999999999999999999999 89998752 467788
Q ss_pred C-cEEecceEEEecCCCcch-h-hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHH
Q 018671 172 G-TEVPYGLLVWSTGVGPST-L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248 (352)
Q Consensus 172 g-~~i~~D~vi~a~G~~~~~-~-~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg 248 (352)
| +++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.. |..++.|.+||
T Consensus 268 G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~~~g 337 (479)
T 2hqm_A 268 SKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVGK---------VELTPVAIAAG 337 (479)
T ss_dssp SCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTTS---------SCCHHHHHHHH
T ss_pred CcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCcc-CCCCEEEEEecCCC---------cccHHHHHHHH
Confidence 8 789999999999999996 5 6788999988999999999998 99999999999741 67899999999
Q ss_pred HHHHHHHHH
Q 018671 249 KYLFSLLNR 257 (352)
Q Consensus 249 ~~~a~~i~~ 257 (352)
+++|+||..
T Consensus 338 ~~aa~~i~~ 346 (479)
T 2hqm_A 338 RKLSNRLFG 346 (479)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHhcC
Confidence 999999864
No 32
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=1.3e-28 Score=238.35 Aligned_cols=190 Identities=25% Similarity=0.411 Sum_probs=159.6
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|..|+++|..+. +.+..++.. ... ..++++|||||++|+|+|
T Consensus 130 ~~i~~d~lViATGs~p~~~~~~g~~~~---v~~~~~~~~----------~~~----------~~~~vvViGgG~~g~e~A 186 (455)
T 1ebd_A 130 QTYTFKNAIIATGSRPIELPNFKFSNR---ILDSTGALN----------LGE----------VPKSLVVIGGGYIGIELG 186 (455)
T ss_dssp EEEECSEEEECCCEEECCBTTBCCCSS---EECHHHHHT----------CSS----------CCSEEEEECCSHHHHHHH
T ss_pred EEEEeCEEEEecCCCCCCCCCCCccce---EecHHHHhc----------ccc----------CCCeEEEECCCHHHHHHH
Confidence 679999999999999999988887443 334444322 111 235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC--eE--EEc---
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--KL--ILN--- 170 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~v--~~~--- 170 (352)
..|++++ .+|+++++. .++|.+++++.+.+.+.|++.||+++++ +|++++.+ .+ .++
T Consensus 187 ~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g 252 (455)
T 1ebd_A 187 TAYANFG--------------TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANG 252 (455)
T ss_dssp HHHHHTT--------------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHcC--------------CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCC
Confidence 9999877 899999997 7889999999999999999999999999 89998743 33 443
Q ss_pred CCcEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHH
Q 018671 171 DGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247 (352)
Q Consensus 171 ~g~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~q 247 (352)
+++++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.. +++++.|.+|
T Consensus 253 ~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~~~ 322 (455)
T 1ebd_A 253 ETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPG---------PALAHKASYE 322 (455)
T ss_dssp EEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS---------CCCHHHHHHH
T ss_pred ceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCC---------cccHHHHHHH
Confidence 45689999999999999984 5 6778888888899999999997 99999999999952 6788999999
Q ss_pred HHHHHHHHH
Q 018671 248 GKYLFSLLN 256 (352)
Q Consensus 248 g~~~a~~i~ 256 (352)
|+++|+||.
T Consensus 323 g~~aa~~i~ 331 (455)
T 1ebd_A 323 GKVAAEAIA 331 (455)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999999985
No 33
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.96 E-value=1.4e-28 Score=238.69 Aligned_cols=190 Identities=22% Similarity=0.369 Sum_probs=161.1
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||+|||+.|..|++||..+. +.+.+++..+ .. ..++++|||||++|+|+|
T Consensus 131 ~~~~~d~lViAtG~~~~~~~~~g~~~~---~~~~~~~~~~----------~~----------~~~~vvViGgG~~g~E~A 187 (464)
T 2a8x_A 131 ESVTFDNAIIATGSSTRLVPGTSLSAN---VVTYEEQILS----------RE----------LPKSIIIAGAGAIGMEFG 187 (464)
T ss_dssp EEEEEEEEEECCCEEECCCTTCCCBTT---EECHHHHHTC----------SS----------CCSEEEEECCSHHHHHHH
T ss_pred EEEEcCEEEECCCCCCCCCCCCCCCce---EEecHHHhhc----------cc----------cCCeEEEECCcHHHHHHH
Confidence 689999999999999999988987543 3344443221 11 235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEc-CC
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN-DG 172 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~-~g 172 (352)
..+++++ .+|+++++. +++|.+++++.+.+.+.|++.||+++++ +|++++.+ .+.++ +|
T Consensus 188 ~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g 253 (464)
T 2a8x_A 188 YVLKNYG--------------VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDG 253 (464)
T ss_dssp HHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSS
T ss_pred HHHHHcC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCC
Confidence 9999887 899999997 7889999999999999999999999999 89999754 24444 66
Q ss_pred --cEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHH
Q 018671 173 --TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247 (352)
Q Consensus 173 --~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~q 247 (352)
+++++|.|++|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+.. +++++.|.+|
T Consensus 254 ~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~~~ 323 (464)
T 2a8x_A 254 VAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGL---------LQLAHVAEAQ 323 (464)
T ss_dssp CEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCS---------SCSHHHHHHH
T ss_pred ceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCC---------ccCHHHHHHH
Confidence 679999999999999995 5 6788898888899999999997 99999999999952 6788999999
Q ss_pred HHHHHHHHH
Q 018671 248 GKYLFSLLN 256 (352)
Q Consensus 248 g~~~a~~i~ 256 (352)
|+++|+||.
T Consensus 324 g~~aa~~i~ 332 (464)
T 2a8x_A 324 GVVAAETIA 332 (464)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999996
No 34
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.96 E-value=2.5e-28 Score=237.25 Aligned_cols=193 Identities=23% Similarity=0.323 Sum_probs=160.6
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|..|++||.... .+.+.+++..+ .. ..++++|||||++|+|+|
T Consensus 133 ~~~~~d~lviAtG~~p~~p~~~g~~~~--~v~t~~~~~~~----------~~----------~~~~vvViGgG~~g~E~A 190 (468)
T 2qae_A 133 EMLETKKTIIATGSEPTELPFLPFDEK--VVLSSTGALAL----------PR----------VPKTMVVIGGGVIGLELG 190 (468)
T ss_dssp EEEEEEEEEECCCEEECCBTTBCCCSS--SEECHHHHHTC----------SS----------CCSEEEEECCSHHHHHHH
T ss_pred EEEEcCEEEECCCCCcCCCCCCCCCcC--ceechHHHhhc----------cc----------CCceEEEECCCHHHHHHH
Confidence 689999999999999999988887431 13344443221 11 235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHH-HhCCCEEEeC-ceEEEECC----eEEEc--
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQL-SKSGVRLVRG-IVKDVDSQ----KLILN-- 170 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l-~~~gV~v~~~-~V~~v~~~----~v~~~-- 170 (352)
..+++++ .+|+++++. .+++.+++++.+.+.+.| ++.||+++++ +|++++.+ .+.++
T Consensus 191 ~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~ 256 (468)
T 2qae_A 191 SVWARLG--------------AEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGK 256 (468)
T ss_dssp HHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC
T ss_pred HHHHHhC--------------CEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcC
Confidence 9999887 899999997 788999999999999999 9999999999 89999754 24554
Q ss_pred CC--cEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 171 DG--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 171 ~g--~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
+| +++++|.||+|+|.+|+. + ++.++++.+++|+|.||+++|+ +.|+|||+|||+.. .|++++.|.
T Consensus 257 ~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~~A~ 327 (468)
T 2qae_A 257 NGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDK--------GPMLAHKAE 327 (468)
T ss_dssp ---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSS--------SCSCHHHHH
T ss_pred CCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCC--------CCccHhHHH
Confidence 67 679999999999999995 5 6788998888899999999998 99999999999951 277899999
Q ss_pred HHHHHHHHHHHH
Q 018671 246 RQGKYLFSLLNR 257 (352)
Q Consensus 246 ~qg~~~a~~i~~ 257 (352)
+||+++|+||..
T Consensus 328 ~~g~~aa~~i~~ 339 (468)
T 2qae_A 328 DEGVACAEILAG 339 (468)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 999999999853
No 35
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.96 E-value=1.5e-28 Score=238.43 Aligned_cols=191 Identities=25% Similarity=0.387 Sum_probs=162.7
Q ss_pred CeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 18 ~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
++.++.||+||||||+.|..|++||. +++ .+.+++.. ... ..++++|||||++|+|
T Consensus 125 ~g~~~~~d~lviAtGs~p~~p~i~G~-~~~---~~~~~~~~----------~~~----------~~~~vvVvGgG~~g~e 180 (463)
T 2r9z_A 125 EGQRLSADHIVIATGGRPIVPRLPGA-ELG---ITSDGFFA----------LQQ----------QPKRVAIIGAGYIGIE 180 (463)
T ss_dssp TTEEEEEEEEEECCCEEECCCSCTTG-GGS---BCHHHHHH----------CSS----------CCSEEEEECCSHHHHH
T ss_pred CCEEEEcCEEEECCCCCCCCCCCCCc-cce---ecHHHHhh----------hhc----------cCCEEEEECCCHHHHH
Confidence 45689999999999999999999997 332 23333322 111 2259999999999999
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcC
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILND 171 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~ 171 (352)
+|..|++++ .+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|++++.+ .|.+++
T Consensus 181 ~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~ 246 (463)
T 2r9z_A 181 LAGLLRSFG--------------SEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQD 246 (463)
T ss_dssp HHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETT
T ss_pred HHHHHHhcC--------------CEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeC
Confidence 999999887 899999997 7888999999999999999999999999 79998753 577789
Q ss_pred Cc-EEecceEEEecCCCcch--h-hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHH
Q 018671 172 GT-EVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247 (352)
Q Consensus 172 g~-~i~~D~vi~a~G~~~~~--~-~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~q 247 (352)
|+ ++++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+.. +..++.|.+|
T Consensus 247 G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~~~ 316 (463)
T 2r9z_A 247 GTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGR---------DQLTPVAIAA 316 (463)
T ss_dssp CCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTS---------CCCHHHHHHH
T ss_pred CcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCC---------cccHHHHHHH
Confidence 98 89999999999999984 3 5778898888999999999997 99999999999851 6788999999
Q ss_pred HHHHHHHHH
Q 018671 248 GKYLFSLLN 256 (352)
Q Consensus 248 g~~~a~~i~ 256 (352)
|+.+|.||.
T Consensus 317 g~~aa~~i~ 325 (463)
T 2r9z_A 317 GRRLAERLF 325 (463)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999999986
No 36
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.96 E-value=4.7e-28 Score=238.31 Aligned_cols=223 Identities=22% Similarity=0.299 Sum_probs=177.8
Q ss_pred eeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 19 KFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 19 ~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
+.++.||+||||||+.|..|++||..... +.+.+++. + .....+ .++++|||||++|+|+
T Consensus 170 g~~~~~d~lViATGs~p~~p~i~G~~~~~--v~~~~~~~---~------~l~~~~---------g~~vvViGgG~~g~E~ 229 (523)
T 1mo9_A 170 GKVFKAKNLILAVGAGPGTLDVPGVNAKG--VFDHATLV---E------ELDYEP---------GSTVVVVGGSKTAVEY 229 (523)
T ss_dssp TEEEEBSCEEECCCEECCCCCSTTTTSBT--EEEHHHHH---H------HCCSCC---------CSEEEEECCSHHHHHH
T ss_pred CEEEEeCEEEECCCCCCCCCCCCCcccCc--EeeHHHHH---H------HHHhcC---------CCeEEEECCCHHHHHH
Confidence 56799999999999999999999975421 12333332 0 111112 1599999999999999
Q ss_pred HHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce------EE
Q 018671 99 SGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK------LI 168 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~------v~ 168 (352)
|..+++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++. ++ |.
T Consensus 230 A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~ 295 (523)
T 1mo9_A 230 GCFFNATG--------------RRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAM 295 (523)
T ss_dssp HHHHHHTT--------------CEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEE
T ss_pred HHHHHHcC--------------CeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEE
Confidence 99999887 899999997 7889999999999999999999999999 8999875 33 56
Q ss_pred EcCCc-EEecceEEEecCCCcch--hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 169 LNDGT-EVPYGLLVWSTGVGPST--LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 169 ~~~g~-~i~~D~vi~a~G~~~~~--~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
+++|+ ++++|.||+|+|.+|+. +++.++++++++|+|.||+++|+ +.|+|||+|||+.. |+.++.|.
T Consensus 296 ~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~ 365 (523)
T 1mo9_A 296 TPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIGG---------PMEMFKAR 365 (523)
T ss_dssp ETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGCS---------SCSHHHHH
T ss_pred ECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCcc-CCCCEEEEeecCCC---------cccHHHHH
Confidence 67887 89999999999999995 68888999988899999999998 99999999999952 57889999
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCcccCCCCCCceeeccceEEEecCcce
Q 018671 246 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKA 294 (352)
Q Consensus 246 ~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~f~~~~~g~~~~lG~~~a 294 (352)
+||+++|+||... .... .+.. .|+.......++++|....
T Consensus 366 ~~g~~aa~~i~g~-----~~~~---~~~~-~p~~~~~~~~~a~vG~~e~ 405 (523)
T 1mo9_A 366 KSGCYAARNVMGE-----KISY---TPKN-YPDFLHTHYEVSFLGMGEE 405 (523)
T ss_dssp HHHHHHHHHHTTC-----CCCC---CCCS-CCEEEESSSEEEEEECCHH
T ss_pred HHHHHHHHHHcCC-----CCCC---CCCC-CCeEEECCCceEEEeCCHH
Confidence 9999999998531 1110 1122 5666555668888886543
No 37
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.96 E-value=5.3e-28 Score=236.12 Aligned_cols=192 Identities=22% Similarity=0.369 Sum_probs=160.1
Q ss_pred eEeeCCEEEEcCCCCCCCCC-CCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~-ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.++.||+||||||+.|..|+ +||..++.+ +.+++. ..... .++++|||||++|+|+
T Consensus 144 ~~~~~d~lViATGs~p~~p~~i~G~~~~~~---~~~~~~----------~~~~~----------~~~vvViGgG~ig~E~ 200 (488)
T 3dgz_A 144 TLLSAEHIVIATGGRPRYPTQVKGALEYGI---TSDDIF----------WLKES----------PGKTLVVGASYVALEC 200 (488)
T ss_dssp EEEEEEEEEECCCEEECCCSSCBTHHHHCB---CHHHHT----------TCSSC----------CCSEEEECCSHHHHHH
T ss_pred EEEECCEEEEcCCCCCCCCCCCCCcccccC---cHHHHH----------hhhhc----------CCeEEEECCCHHHHHH
Confidence 58999999999999999998 999865443 223221 11222 2489999999999999
Q ss_pred HHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC---C--eEEEcC-
Q 018671 99 SGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS---Q--KLILND- 171 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~---~--~v~~~~- 171 (352)
|..+++++ .+|+++++.++++.+++++.+.+.+.|++.||+++++ ++++++. + .+.+.+
T Consensus 201 A~~l~~~g--------------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~ 266 (488)
T 3dgz_A 201 AGFLTGIG--------------LDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDH 266 (488)
T ss_dssp HHHHHHTT--------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEET
T ss_pred HHHHHHcC--------------CceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeC
Confidence 99999887 8999999888889999999999999999999999999 7888864 2 255544
Q ss_pred --Cc--EEecceEEEecCCCcch-h--hhhcCCCCC-CCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHH
Q 018671 172 --GT--EVPYGLLVWSTGVGPST-L--VKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243 (352)
Q Consensus 172 --g~--~i~~D~vi~a~G~~~~~-~--~~~~~l~~~-~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~ 243 (352)
|+ ++++|.|++|+|.+|+. + ++.++++++ ++|+|.||+++|+ +.|+|||+|||+. + .|..++.
T Consensus 267 ~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~-----~---~~~~~~~ 337 (488)
T 3dgz_A 267 ASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAE-----G---RPELTPT 337 (488)
T ss_dssp TTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBT-----T---CCCCHHH
T ss_pred CCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecC-----C---CCcchhH
Confidence 54 47999999999999994 4 577889888 7899999999998 9999999999984 1 2778999
Q ss_pred HHHHHHHHHHHHHH
Q 018671 244 AERQGKYLFSLLNR 257 (352)
Q Consensus 244 A~~qg~~~a~~i~~ 257 (352)
|..||+++|+||..
T Consensus 338 A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 338 AIKAGKLLAQRLFG 351 (488)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999863
No 38
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=3.5e-28 Score=236.30 Aligned_cols=191 Identities=26% Similarity=0.352 Sum_probs=160.2
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||+|||+.|..|+++|.... .+.+..++.. ... ..++++|||||++|+|+|
T Consensus 136 ~~i~~d~lIiAtGs~p~~p~~~g~~~~--~v~~~~~~~~----------~~~----------~~~~vvViGgG~~g~e~A 193 (470)
T 1dxl_A 136 TVVKGKHIIIATGSDVKSLPGVTIDEK--KIVSSTGALA----------LSE----------IPKKLVVIGAGYIGLEMG 193 (470)
T ss_dssp EEEECSEEEECCCEEECCBTTBCCCSS--SEECHHHHTT----------CSS----------CCSEEEESCCSHHHHHHH
T ss_pred EEEEcCEEEECCCCCCCCCCCCCCCcc--cEEeHHHhhh----------hhh----------cCCeEEEECCCHHHHHHH
Confidence 689999999999999999988887431 1223333321 111 235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEc---
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN--- 170 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~--- 170 (352)
..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .+.++
T Consensus 194 ~~l~~~g--------------~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~ 259 (470)
T 1dxl_A 194 SVWGRIG--------------SEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSA 259 (470)
T ss_dssp HHHHHHT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESS
T ss_pred HHHHHcC--------------CcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecC
Confidence 9999877 899999997 7889999999999999999999999999 89999864 24443
Q ss_pred CC--cEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 171 DG--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 171 ~g--~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
+| +++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.. +++++.|.
T Consensus 260 ~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~ 329 (470)
T 1dxl_A 260 GGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIPG---------PMLAHKAE 329 (470)
T ss_dssp SCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSS---------CCCHHHHH
T ss_pred CCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCC---------CccHHHHH
Confidence 45 689999999999999995 5 6778888888899999999997 99999999999952 67889999
Q ss_pred HHHHHHHHHHH
Q 018671 246 RQGKYLFSLLN 256 (352)
Q Consensus 246 ~qg~~~a~~i~ 256 (352)
+||+++|+||.
T Consensus 330 ~~g~~aa~~i~ 340 (470)
T 1dxl_A 330 EDGVACVEYLA 340 (470)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999999985
No 39
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.96 E-value=1.2e-27 Score=232.92 Aligned_cols=197 Identities=28% Similarity=0.364 Sum_probs=163.5
Q ss_pred cccCCCeeEeeCCEEEEcCCCCCCCC---CCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEE
Q 018671 13 RTLEPWKFKISYDKLVIALGAEASTF---GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVV 89 (352)
Q Consensus 13 ~~~~~~~~~i~yD~LViAtGs~~~~~---~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVv 89 (352)
..+..++.++.||+||||||+.|..| ++||.. +. .+.++.. ..... .++++||
T Consensus 138 ~~v~~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~-~~---~~~~~~~----------~~~~~----------~~~vvVi 193 (478)
T 3dk9_A 138 PTIEVSGKKYTAPHILIATGGMPSTPHESQIPGAS-LG---ITSDGFF----------QLEEL----------PGRSVIV 193 (478)
T ss_dssp CEEEETTEEEECSCEEECCCEEECCCCTTTSTTGG-GS---BCHHHHT----------TCCSC----------CSEEEEE
T ss_pred EEEEECCEEEEeeEEEEccCCCCCCCCcCCCCCCc-ee---EchHHhh----------chhhc----------CccEEEE
Confidence 33445667899999999999999999 899974 22 2223221 11112 2599999
Q ss_pred CCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC--
Q 018671 90 GGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-- 165 (352)
Q Consensus 90 GgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-- 165 (352)
|||++|+|+|..+++++ .+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|++++.+
T Consensus 194 GgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 259 (478)
T 3dk9_A 194 GAGYIAVEMAGILSALG--------------SKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS 259 (478)
T ss_dssp CCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS
T ss_pred CCCHHHHHHHHHHHHcC--------------CeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC
Confidence 99999999999999887 899999986 7889999999999999999999999999 79988742
Q ss_pred e----EEEcC---C----cEEecceEEEecCCCcch--h-hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccC
Q 018671 166 K----LILND---G----TEVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES 231 (352)
Q Consensus 166 ~----v~~~~---g----~~i~~D~vi~a~G~~~~~--~-~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~ 231 (352)
+ +.+.+ | +++++|.|++|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.
T Consensus 260 ~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~---- 334 (478)
T 3dk9_A 260 GLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCG---- 334 (478)
T ss_dssp SEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGC----
T ss_pred CcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCC----
Confidence 2 55554 2 679999999999999995 3 6788999989999999999998 9999999999994
Q ss_pred CCCcCCCCchHHHHHHHHHHHHHHHH
Q 018671 232 TGKTVLPALAQVAERQGKYLFSLLNR 257 (352)
Q Consensus 232 ~~~~~~~~~~~~A~~qg~~~a~~i~~ 257 (352)
.|+.++.|..||+++|+||..
T Consensus 335 -----~~~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 335 -----KALLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHHS
T ss_pred -----CCccHhHHHHHHHHHHHHHcC
Confidence 278899999999999999864
No 40
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.96 E-value=2.5e-28 Score=238.01 Aligned_cols=190 Identities=18% Similarity=0.265 Sum_probs=159.8
Q ss_pred eEeeCCEEEEcCCCCCCCCC-CCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~-ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.+++||+||+|||+.|..|+ +| ... .+.+.+++..+ .. ..++++|||||++|+|+
T Consensus 145 ~~i~ad~lViAtGs~p~~~~~i~-~~~---~v~~~~~~~~~----------~~----------~~~~vvViGgG~ig~E~ 200 (482)
T 1ojt_A 145 KIVAFKNCIIAAGSRVTKLPFIP-EDP---RIIDSSGALAL----------KE----------VPGKLLIIGGGIIGLEM 200 (482)
T ss_dssp EEEEEEEEEECCCEEECCCSSCC-CCT---TEECHHHHTTC----------CC----------CCSEEEEESCSHHHHHH
T ss_pred eEEEcCEEEECCCCCCCCCCCCC-ccC---cEEcHHHHhcc----------cc----------cCCeEEEECCCHHHHHH
Confidence 57999999999999998776 55 322 23344443221 11 23599999999999999
Q ss_pred HHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcC-
Q 018671 99 SGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILND- 171 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~- 171 (352)
|..|++++ .+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|++++.+ .+.+++
T Consensus 201 A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~ 266 (482)
T 1ojt_A 201 GTVYSTLG--------------SRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGA 266 (482)
T ss_dssp HHHHHHHT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESS
T ss_pred HHHHHHcC--------------CeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEecc
Confidence 99999887 899999997 7889999999999999999999999999 89998753 366766
Q ss_pred ---CcEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 172 ---GTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 172 ---g~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
|+++++|.|++|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.. |++++.|.
T Consensus 267 ~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~l~~~A~ 336 (482)
T 1ojt_A 267 NAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVGQ---------PMLAHKAV 336 (482)
T ss_dssp SCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTCS---------SCCHHHHH
T ss_pred CCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccCC---------CccHHHHH
Confidence 7789999999999999995 5 5788998888899999999998 99999999999952 67899999
Q ss_pred HHHHHHHHHHHH
Q 018671 246 RQGKYLFSLLNR 257 (352)
Q Consensus 246 ~qg~~~a~~i~~ 257 (352)
+||+++|+||..
T Consensus 337 ~~g~~aa~~i~g 348 (482)
T 1ojt_A 337 HEGHVAAENCAG 348 (482)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 999999999863
No 41
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.96 E-value=9e-28 Score=234.19 Aligned_cols=191 Identities=23% Similarity=0.324 Sum_probs=160.3
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|..|++||..++.+ +.+++. .... ..++++|||+|++|+|+|
T Consensus 147 ~~~~~d~lviATGs~p~~p~i~G~~~~~~---~~~~~~----------~~~~----------~~~~vvViGgG~~g~E~A 203 (483)
T 3dgh_A 147 RTITAQTFVIAVGGRPRYPDIPGAVEYGI---TSDDLF----------SLDR----------EPGKTLVVGAGYIGLECA 203 (483)
T ss_dssp EEEEEEEEEECCCEEECCCSSTTHHHHCB---CHHHHT----------TCSS----------CCCEEEEECCSHHHHHHH
T ss_pred EEEEcCEEEEeCCCCcCCCCCCCcccccC---cHHHHh----------hhhh----------cCCcEEEECCCHHHHHHH
Confidence 47999999999999999999999865433 223221 1111 225899999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--C---eEEEcCCc
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGT 173 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~---~v~~~~g~ 173 (352)
..+++++ .+|+++++.++++.+++++.+.+.+.|++.||+++++ +|++++. + .|.+.+++
T Consensus 204 ~~l~~~g--------------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~ 269 (483)
T 3dgh_A 204 GFLKGLG--------------YEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVE 269 (483)
T ss_dssp HHHHHTT--------------CEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETT
T ss_pred HHHHHcC--------------CEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCC
Confidence 9999887 8999999888889999999999999999999999999 7998874 2 26666553
Q ss_pred -----EEecceEEEecCCCcch-hh--hhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 174 -----EVPYGLLVWSTGVGPST-LV--KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 174 -----~i~~D~vi~a~G~~~~~-~~--~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
++++|.|++|+|.+|+. ++ +.++++.++ |+|.||+++|+ +.|+|||+|||+. + .|..++.|.
T Consensus 270 ~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~-----~---~~~~~~~A~ 339 (483)
T 3dgh_A 270 TGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIY-----G---KPELTPVAV 339 (483)
T ss_dssp TCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBT-----T---SCCCHHHHH
T ss_pred CCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEEEEEcccC-----C---CCccHHHHH
Confidence 79999999999999984 44 778898888 99999999998 9999999999984 1 278899999
Q ss_pred HHHHHHHHHHHH
Q 018671 246 RQGKYLFSLLNR 257 (352)
Q Consensus 246 ~qg~~~a~~i~~ 257 (352)
.||+++|+||..
T Consensus 340 ~~g~~aa~~i~g 351 (483)
T 3dgh_A 340 LAGRLLARRLYG 351 (483)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHcC
Confidence 999999999863
No 42
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.96 E-value=4.3e-28 Score=236.18 Aligned_cols=190 Identities=21% Similarity=0.319 Sum_probs=157.3
Q ss_pred eeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHHHH
Q 018671 22 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGE 101 (352)
Q Consensus 22 i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~ 101 (352)
+.||+||+|||+.|. .+||.......+.+.+++..+ .. ..++++|||||++|+|+|..
T Consensus 144 i~~d~lViAtGs~p~--~~~g~~~~~~~v~~~~~~~~~----------~~----------~~~~vvViGgG~~g~e~A~~ 201 (478)
T 1v59_A 144 LDVKNIIVATGSEVT--PFPGIEIDEEKIVSSTGALSL----------KE----------IPKRLTIIGGGIIGLEMGSV 201 (478)
T ss_dssp EEEEEEEECCCEEEC--CCTTCCCCSSSEECHHHHTTC----------SS----------CCSEEEEECCSHHHHHHHHH
T ss_pred EEeCEEEECcCCCCC--CCCCCCCCCceEEcHHHHHhh----------hc----------cCceEEEECCCHHHHHHHHH
Confidence 999999999999884 456653222234454444221 11 13599999999999999999
Q ss_pred HHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--C----eEEEc---
Q 018671 102 LSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q----KLILN--- 170 (352)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~----~v~~~--- 170 (352)
|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++. + .+.++
T Consensus 202 l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~ 267 (478)
T 1v59_A 202 YSRLG--------------SKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTK 267 (478)
T ss_dssp HHHTT--------------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETT
T ss_pred HHHcC--------------CEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcC
Confidence 99887 899999997 7889999999999999999999999999 8999875 2 35555
Q ss_pred --CCcEEecceEEEecCCCcch---hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 171 --DGTEVPYGLLVWSTGVGPST---LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 171 --~g~~i~~D~vi~a~G~~~~~---~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
+++++++|.||+|+|.+|+. ++++++++++++|+|.||+++|+ +.|+|||+|||+.. ++.++.|.
T Consensus 268 ~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~ 337 (478)
T 1v59_A 268 TNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTFG---------PMLAHKAE 337 (478)
T ss_dssp TTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS---------CCCHHHHH
T ss_pred CCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCcc-CCCCEEEeeccCCC---------cccHHHHH
Confidence 35689999999999999994 57888898888899999999997 89999999999962 67889999
Q ss_pred HHHHHHHHHHHH
Q 018671 246 RQGKYLFSLLNR 257 (352)
Q Consensus 246 ~qg~~~a~~i~~ 257 (352)
+||+++|+||..
T Consensus 338 ~~g~~aa~~i~~ 349 (478)
T 1v59_A 338 EEGIAAVEMLKT 349 (478)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC
Confidence 999999999974
No 43
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.96 E-value=2.6e-28 Score=236.95 Aligned_cols=192 Identities=20% Similarity=0.285 Sum_probs=159.6
Q ss_pred CeeE--eeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHH
Q 018671 18 WKFK--ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTG 95 (352)
Q Consensus 18 ~~~~--i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 95 (352)
++.+ +.||+||||||+.|+.|++||.+ . +.+.+++..+++.+ . ...++++|||||++|
T Consensus 125 ~g~~~~~~~d~lviAtG~~p~~p~i~G~~-~---~~t~~~~~~~~~~l------~----------~~~~~vvViGgG~~g 184 (466)
T 3l8k_A 125 EGKEIEAETRYMIIASGAETAKLRLPGVE-Y---CLTSDDIFGYKTSF------R----------KLPQDMVIIGAGYIG 184 (466)
T ss_dssp TSCEEEEEEEEEEECCCEEECCCCCTTGG-G---SBCHHHHHSTTCSC------C----------SCCSEEEEECCSHHH
T ss_pred CCcEEEEecCEEEECCCCCccCCCCCCcc-c---eEeHHHHHHHHHHH------h----------hCCCeEEEECCCHHH
Confidence 4456 99999999999999999999985 2 44455543221110 1 123599999999999
Q ss_pred HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCC-cHHHHHHHHHHHHhCCCEEEeC-ceEEEEC---Ce--E
Q 018671 96 VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSF-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS---QK--L 167 (352)
Q Consensus 96 ~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~---~~--v 167 (352)
+|+|..+++++ .+|+++++. ++++.+ ++++.+.+.+.|+ |+++++ +|++++. +. +
T Consensus 185 ~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v 247 (466)
T 3l8k_A 185 LEIASIFRLMG--------------VQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEV 247 (466)
T ss_dssp HHHHHHHHHTT--------------CEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEE
T ss_pred HHHHHHHHHcC--------------CEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEE
Confidence 99999999887 899999997 788888 9999999988887 999998 7998876 33 5
Q ss_pred EEc--CCc--EEecceEEEecCCCcchh--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCch
Q 018671 168 ILN--DGT--EVPYGLLVWSTGVGPSTL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241 (352)
Q Consensus 168 ~~~--~g~--~i~~D~vi~a~G~~~~~~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~ 241 (352)
.++ +|+ ++++|.|++|+|.+|+.. ++.++++++++| |.||+++|+ +.|+|||+|||+.. |+++
T Consensus 248 ~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~ 316 (466)
T 3l8k_A 248 IYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDETMKT-NIPNVFATGDANGL---------APYY 316 (466)
T ss_dssp EECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCS---------CCSH
T ss_pred EEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCCC---------CccH
Confidence 666 666 899999999999999953 778899999899 999999998 99999999999962 7889
Q ss_pred HHHHHHHHHHHHHHHH
Q 018671 242 QVAERQGKYLFSLLNR 257 (352)
Q Consensus 242 ~~A~~qg~~~a~~i~~ 257 (352)
+.|..||+++|+||..
T Consensus 317 ~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 317 HAAVRMSIAAANNIMA 332 (466)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhC
Confidence 9999999999999964
No 44
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.96 E-value=2.7e-27 Score=229.64 Aligned_cols=192 Identities=22% Similarity=0.344 Sum_probs=163.6
Q ss_pred CCeeEeeCCEEEEcCCCCCC-CCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHH
Q 018671 17 PWKFKISYDKLVIALGAEAS-TFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTG 95 (352)
Q Consensus 17 ~~~~~i~yD~LViAtGs~~~-~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 95 (352)
.++.++.||+||||||+.|. .|++||.. ++ .+.++... ... ..++++|||+|++|
T Consensus 127 ~~~~~~~~d~lviAtG~~p~~~p~i~G~~-~~---~~~~~~~~----------~~~----------~~~~v~ViGgG~~g 182 (463)
T 4dna_A 127 ASGKTVTAERIVIAVGGHPSPHDALPGHE-LC---ITSNEAFD----------LPA----------LPESILIAGGGYIA 182 (463)
T ss_dssp TTTEEEEEEEEEECCCEEECCCTTSTTGG-GC---BCHHHHTT----------CSS----------CCSEEEEECCSHHH
T ss_pred cCCeEEEeCEEEEecCCCcccCCCCCCcc-cc---ccHHHHhh----------hhc----------CCCeEEEECCCHHH
Confidence 35678999999999999999 99999974 22 23333211 111 23599999999999
Q ss_pred HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEE
Q 018671 96 VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLI 168 (352)
Q Consensus 96 ~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~ 168 (352)
+|+|..+++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .|.
T Consensus 183 ~e~A~~l~~~g--------------~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~ 248 (463)
T 4dna_A 183 VEFANIFHGLG--------------VKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVAT 248 (463)
T ss_dssp HHHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEE
T ss_pred HHHHHHHHHcC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEE
Confidence 99999999877 899999987 7889999999999999999999999998 89998753 467
Q ss_pred -EcCCcEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHH
Q 018671 169 -LNDGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 244 (352)
Q Consensus 169 -~~~g~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A 244 (352)
+++|+ +++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+. .+++++.|
T Consensus 249 ~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~---------~~~~~~~A 317 (463)
T 4dna_A 249 TMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTD---------RVQLTPVA 317 (463)
T ss_dssp ESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGS---------SCCCHHHH
T ss_pred EcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCC---------CCCChHHH
Confidence 77887 9999999999999995 4 6788999999999999999997 9999999999995 27889999
Q ss_pred HHHHHHHHHHHHH
Q 018671 245 ERQGKYLFSLLNR 257 (352)
Q Consensus 245 ~~qg~~~a~~i~~ 257 (352)
..||+++|+||..
T Consensus 318 ~~~g~~aa~~i~g 330 (463)
T 4dna_A 318 IHEAMCFIETEYK 330 (463)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999963
No 45
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.96 E-value=6.1e-28 Score=236.28 Aligned_cols=190 Identities=23% Similarity=0.330 Sum_probs=160.4
Q ss_pred EeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHHH
Q 018671 21 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSG 100 (352)
Q Consensus 21 ~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~ 100 (352)
++.||+||||||+.|..|++||..... +.+..++.. ... ..++++|||+|++|+|+|.
T Consensus 142 ~~~~d~lviATGs~p~~p~i~g~~~~~--v~~~~~~~~----------~~~----------~~~~vvViGgG~ig~E~A~ 199 (499)
T 1xdi_A 142 EHEADVVLVATGASPRILPSAQPDGER--ILTWRQLYD----------LDA----------LPDHLIVVGSGVTGAEFVD 199 (499)
T ss_dssp EEEESEEEECCCEEECCCGGGCCCSSS--EEEGGGGGG----------CSS----------CCSSEEEESCSHHHHHHHH
T ss_pred EEEeCEEEEcCCCCCCCCCCCCCCcCc--EEehhHhhh----------hhc----------cCCeEEEECCCHHHHHHHH
Confidence 799999999999999999899874321 112222211 111 2359999999999999999
Q ss_pred HHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCCcE
Q 018671 101 ELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTE 174 (352)
Q Consensus 101 ~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~ 174 (352)
.+++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .+.+.+|++
T Consensus 200 ~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~ 265 (499)
T 1xdi_A 200 AYTELG--------------VPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRT 265 (499)
T ss_dssp HHHHTT--------------CCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCE
T ss_pred HHHHcC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcE
Confidence 999887 899999997 7889999999999999999999999999 89999754 245578889
Q ss_pred EecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHH
Q 018671 175 VPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 251 (352)
Q Consensus 175 i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~ 251 (352)
+++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+.. ++.++.|.+||+++
T Consensus 266 i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~---------~~l~~~A~~~g~~a 335 (499)
T 1xdi_A 266 VEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTGL---------LPLASVAAMQGRIA 335 (499)
T ss_dssp EEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGTS---------CSCHHHHHHHHHHH
T ss_pred EEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEeccCCC---------cccHHHHHHHHHHH
Confidence 9999999999999995 6 6788898888899999999998 99999999999962 67889999999999
Q ss_pred HHHHH
Q 018671 252 FSLLN 256 (352)
Q Consensus 252 a~~i~ 256 (352)
|+||.
T Consensus 336 a~~i~ 340 (499)
T 1xdi_A 336 MYHAL 340 (499)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99985
No 46
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.96 E-value=2.2e-27 Score=230.56 Aligned_cols=189 Identities=21% Similarity=0.289 Sum_probs=158.5
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|+.|++||.++. .+.+.+++.++ .. ..++++|||||++|+|+|
T Consensus 135 ~~~~~d~lviAtGs~p~~p~i~G~~~~--~~~~~~~~~~~----------~~----------~~~~vvViGgG~~g~E~A 192 (467)
T 1zk7_A 135 RVVMFDRCLVATGASPAVPPIPGLKES--PYWTSTEALAS----------DT----------IPERLAVIGSSVVALELA 192 (467)
T ss_dssp EEEECSEEEECCCEEECCCCCTTTTTS--CCBCHHHHHHC----------SS----------CCSEEEEECCSHHHHHHH
T ss_pred EEEEeCEEEEeCCCCCCCCCCCCCCcC--ceecHHHHhcc----------cc----------cCCEEEEECCCHHHHHHH
Confidence 679999999999999999999997442 22344443221 11 235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCCc
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT 173 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~ 173 (352)
..+++++ .+|+++++. .++| +++++.+.+.+.+++.||+++++ +|++++.+ .+.++ +.
T Consensus 193 ~~l~~~g--------------~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~ 256 (467)
T 1zk7_A 193 QAFARLG--------------SKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HG 256 (467)
T ss_dssp HHHHHTT--------------CEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TE
T ss_pred HHHHHcC--------------CEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-Cc
Confidence 9999887 899999987 7888 99999999999999999999998 89988643 24444 56
Q ss_pred EEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHH
Q 018671 174 EVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 250 (352)
Q Consensus 174 ~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~ 250 (352)
++++|.||+|+|.+|+. + ++.++++.+++|+|.||+++|+ +.|+|||+|||+.. |..++.|.+||+.
T Consensus 257 ~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~---------~~~~~~A~~~g~~ 326 (467)
T 1zk7_A 257 ELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQ---------PQFVYVAAAAGTR 326 (467)
T ss_dssp EEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSS---------CCCHHHHHHHHHH
T ss_pred EEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCC---------cccHHHHHHHHHH
Confidence 89999999999999984 3 5678888888899999999998 99999999999963 6678999999999
Q ss_pred HHHHHH
Q 018671 251 LFSLLN 256 (352)
Q Consensus 251 ~a~~i~ 256 (352)
+|.||.
T Consensus 327 aa~~i~ 332 (467)
T 1zk7_A 327 AAINMT 332 (467)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 999985
No 47
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.95 E-value=1.8e-27 Score=234.00 Aligned_cols=192 Identities=22% Similarity=0.345 Sum_probs=156.8
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|+.|++||..++.+ +.+++. .....| ++++|||||++|+|+|
T Consensus 170 ~~i~~d~lViATGs~p~~p~i~G~~~~~~---t~~~~~----------~l~~~~----------~~vvVIGgG~ig~E~A 226 (519)
T 3qfa_A 170 KIYSAERFLIATGERPRYLGIPGDKEYCI---SSDDLF----------SLPYCP----------GKTLVVGASYVALECA 226 (519)
T ss_dssp CEEEEEEEEECCCEEECCCCCTTHHHHCB---CHHHHT----------TCSSCC----------CSEEEECCSHHHHHHH
T ss_pred EEEECCEEEEECCCCcCCCCCCCccCceE---cHHHHh----------hhhhcC----------CeEEEECCcHHHHHHH
Confidence 47999999999999999999999755432 223321 112222 4899999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC------CeE--EE-
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS------QKL--IL- 169 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~------~~v--~~- 169 (352)
..+++++ .+|+++++..+++.+++++.+.+.+.|++.||+++++ ++++++. +.+ .+
T Consensus 227 ~~l~~~G--------------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~ 292 (519)
T 3qfa_A 227 GFLAGIG--------------LDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQ 292 (519)
T ss_dssp HHHHHTT--------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEE
T ss_pred HHHHHcC--------------CeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEE
Confidence 9999887 8999999888889999999999999999999999998 5665542 223 22
Q ss_pred -cCC-c--EEecceEEEecCCCcch-h--hhhcCCCCC-CCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCch
Q 018671 170 -NDG-T--EVPYGLLVWSTGVGPST-L--VKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241 (352)
Q Consensus 170 -~~g-~--~i~~D~vi~a~G~~~~~-~--~~~~~l~~~-~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~ 241 (352)
.+| + ++++|.|++|+|.+|+. + ++.++++++ ++|+|.||+++|+ +.|+|||+|||+. + .|+.+
T Consensus 293 ~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~-----g---~~~~~ 363 (519)
T 3qfa_A 293 STNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILE-----D---KVELT 363 (519)
T ss_dssp ESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBS-----S---SCCCH
T ss_pred ECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccC-----C---CCccH
Confidence 355 2 57899999999999985 3 677788887 5799999999998 9999999999984 1 27889
Q ss_pred HHHHHHHHHHHHHHHH
Q 018671 242 QVAERQGKYLFSLLNR 257 (352)
Q Consensus 242 ~~A~~qg~~~a~~i~~ 257 (352)
+.|..||+++|+||..
T Consensus 364 ~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 364 PVAIQAGRLLAQRLYA 379 (519)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999999863
No 48
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.95 E-value=7.8e-28 Score=233.45 Aligned_cols=191 Identities=24% Similarity=0.312 Sum_probs=159.0
Q ss_pred eeEeeCCEEEEcCCCCCCCCC-CCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 19 KFKISYDKLVIALGAEASTFG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 19 ~~~i~yD~LViAtGs~~~~~~-ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
+.+++||+||||||++|..|+ +|| .+. +.+.+++.++. . ...++++|||||++|+|
T Consensus 127 g~~~~~d~lViATGs~p~~p~gi~~-~~~---v~~~~~~~~l~----------~---------~~~~~vvViGgG~~g~e 183 (464)
T 2eq6_A 127 GERYGAKSLILATGSEPLELKGFPF-GED---VWDSTRALKVE----------E---------GLPKRLLVIGGGAVGLE 183 (464)
T ss_dssp TEEEEEEEEEECCCEEECCBTTBCC-SSS---EECHHHHTCGG----------G---------CCCSEEEEECCSHHHHH
T ss_pred cEEEEeCEEEEcCCCCCCCCCCCCC-CCc---EEcHHHHHhhh----------h---------hcCCEEEEECCCHHHHH
Confidence 568999999999999998875 776 222 22444443221 1 01259999999999999
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEc-
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN- 170 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~- 170 (352)
+|..|++++ .+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|++++.+ .+.++
T Consensus 184 ~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~ 249 (464)
T 2eq6_A 184 LGQVYRRLG--------------AEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEP 249 (464)
T ss_dssp HHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHCC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEee
Confidence 999999876 899999997 7889999999999999999999999999 89998753 35565
Q ss_pred C--Cc--EEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHH
Q 018671 171 D--GT--EVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243 (352)
Q Consensus 171 ~--g~--~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~ 243 (352)
+ |+ ++++|.|++|+|.+|+. + ++.++++.+++|+|.||+++|+ +.|+|||+|||+.. +++++.
T Consensus 250 ~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~---------~~l~~~ 319 (464)
T 2eq6_A 250 AEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARP---------PLLAHK 319 (464)
T ss_dssp TTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCS---------SCCHHH
T ss_pred cCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCCC---------cccHHH
Confidence 6 76 89999999999999994 3 5778888888899999999998 89999999999952 678899
Q ss_pred HHHHHHHHHHHHH
Q 018671 244 AERQGKYLFSLLN 256 (352)
Q Consensus 244 A~~qg~~~a~~i~ 256 (352)
|.+||+.+|+||.
T Consensus 320 A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 320 AMREGLIAAENAA 332 (464)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999985
No 49
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.95 E-value=1.5e-27 Score=230.99 Aligned_cols=194 Identities=24% Similarity=0.291 Sum_probs=161.3
Q ss_pred CeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 18 ~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
++.++.||+||||||+.|..|+++|.... .+.+..++.. ... ..++|+|||||++|+|
T Consensus 124 ~g~~~~~d~lviAtG~~p~~~~~~g~~~~--~v~~~~~~~~----------~~~----------~~~~vvIiGgG~~g~e 181 (455)
T 2yqu_A 124 TGEELEARYILIATGSAPLIPPWAQVDYE--RVVTSTEALS----------FPE----------VPKRLIVVGGGVIGLE 181 (455)
T ss_dssp TCCEEEEEEEEECCCEEECCCTTBCCCSS--SEECHHHHTC----------CSS----------CCSEEEEECCSHHHHH
T ss_pred CCEEEEecEEEECCCCCCCCCCCCCCCcC--cEechHHhhc----------ccc----------CCCeEEEECCCHHHHH
Confidence 45689999999999999999988886431 1223333211 111 2359999999999999
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC--e--EEEcC
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K--LILND 171 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~--v~~~~ 171 (352)
+|..|++++ .+|+++++. .++|.+++++.+.+.+.+++.||+++++ +|++++.+ . +.+++
T Consensus 182 ~A~~l~~~g--------------~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~ 247 (455)
T 2yqu_A 182 LGVVWHRLG--------------AEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEG 247 (455)
T ss_dssp HHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETT
T ss_pred HHHHHHHcC--------------CEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECC
Confidence 999999876 899999987 7889999999999999999999999999 89998753 3 45568
Q ss_pred CcEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHH
Q 018671 172 GTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248 (352)
Q Consensus 172 g~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg 248 (352)
|+++++|.||+|+|.+|+. + ++.++++.+++|++.||+++|+ +.|+|||+|||+.. +++++.|.+||
T Consensus 248 g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~---------~~~~~~A~~~g 317 (455)
T 2yqu_A 248 GEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRG---------PMLAHKASEEG 317 (455)
T ss_dssp SCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSS---------CCCHHHHHHHH
T ss_pred CeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCC---------ccCHHHHHHhH
Confidence 8899999999999999984 4 5777888888899999999997 89999999999952 67889999999
Q ss_pred HHHHHHHHH
Q 018671 249 KYLFSLLNR 257 (352)
Q Consensus 249 ~~~a~~i~~ 257 (352)
+.+|+||..
T Consensus 318 ~~aa~~i~~ 326 (455)
T 2yqu_A 318 IAAVEHMVR 326 (455)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHcC
Confidence 999999974
No 50
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.95 E-value=1.8e-27 Score=233.78 Aligned_cols=195 Identities=23% Similarity=0.291 Sum_probs=160.2
Q ss_pred CCeeEeeCCEEEEcCCCCCCCCCCCCc-cccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHH
Q 018671 17 PWKFKISYDKLVIALGAEASTFGIHGV-KENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTG 95 (352)
Q Consensus 17 ~~~~~i~yD~LViAtGs~~~~~~ipG~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 95 (352)
+++.++++|++||||||+|..|+.++. .+..+ +-+++ |.+...|. +++|||||++|
T Consensus 179 ~~~~~i~a~~iiIATGs~P~~P~~~~~~~~~~~---ts~~~----------l~l~~lP~----------~lvIIGgG~IG 235 (542)
T 4b1b_A 179 SKEETVTGKYILIATGCRPHIPDDVEGAKELSI---TSDDI----------FSLKKDPG----------KTLVVGASYVA 235 (542)
T ss_dssp CCEEEEEEEEEEECCCEEECCCSSSBTHHHHCB---CHHHH----------TTCSSCCC----------SEEEECCSHHH
T ss_pred CceEEEeeeeEEeccCCCCCCCCcccCCCcccc---Cchhh----------hccccCCc----------eEEEECCCHHH
Confidence 355789999999999999998865443 33332 22332 44455554 99999999999
Q ss_pred HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEc
Q 018671 96 VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN 170 (352)
Q Consensus 96 ~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~ 170 (352)
+|+|..++.++ .+||++++.++||.+++++.+.+.+.|++.||+++++ .+++++.. .|.+.
T Consensus 236 lE~A~~~~~lG--------------~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~ 301 (542)
T 4b1b_A 236 LECSGFLNSLG--------------YDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFS 301 (542)
T ss_dssp HHHHHHHHHHT--------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEET
T ss_pred HHHHHHHHhcC--------------CeEEEecccccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEc
Confidence 99999999998 8999999888999999999999999999999999999 78877653 35677
Q ss_pred CCcEEecceEEEecCCCcch-h--hhhcCCCCCCCCc-cccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHH
Q 018671 171 DGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 246 (352)
Q Consensus 171 ~g~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~-i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~ 246 (352)
+++++.+|.|++|+|.+||. . ++..++.++.+|. +.||+++|| +.|+|||+|||+. ..|.+++.|..
T Consensus 302 ~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~--------~~p~La~~A~~ 372 (542)
T 4b1b_A 302 DKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAE--------NVPELAPVAIK 372 (542)
T ss_dssp TSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBT--------TCCCCHHHHHH
T ss_pred CCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccc-cCCCeEEeccccC--------CchhHHHHHHH
Confidence 88899999999999999994 2 4556777776555 578889998 9999999999984 13789999999
Q ss_pred HHHHHHHHHHH
Q 018671 247 QGKYLFSLLNR 257 (352)
Q Consensus 247 qg~~~a~~i~~ 257 (352)
||+++++|+..
T Consensus 373 eg~~aa~~i~g 383 (542)
T 4b1b_A 373 AGEILARRLFK 383 (542)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhc
Confidence 99999999864
No 51
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.95 E-value=9.7e-28 Score=220.77 Aligned_cols=199 Identities=25% Similarity=0.361 Sum_probs=157.3
Q ss_pred cCCCeeEeeCCEEEEcCCCCCCCCCCCCcccc---CcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECC
Q 018671 15 LEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 91 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGg 91 (352)
.+.++.++.||+||+|||+.|+.|++||..++ ........+. .....++|+|||+
T Consensus 105 ~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~----------------------~~~~~~~v~vvG~ 162 (323)
T 3f8d_A 105 KTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADA----------------------PLFKNRVVAVIGG 162 (323)
T ss_dssp EESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHG----------------------GGGTTCEEEEECC
T ss_pred EECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCH----------------------hHcCCCEEEEECC
Confidence 34455789999999999999999999997542 1111111110 0122369999999
Q ss_pred ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----
Q 018671 92 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---- 165 (352)
Q Consensus 92 G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~---- 165 (352)
|++|+|+|..|.+.+ .+|+++++. .+++ .+. ...+.+++.||+++.+ +|++++.+
T Consensus 163 G~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~--~~~---~~~~~~~~~gv~~~~~~~v~~i~~~~~~~ 223 (323)
T 3f8d_A 163 GDSALEGAEILSSYS--------------TKVYLIHRRDTFKA--QPI---YVETVKKKPNVEFVLNSVVKEIKGDKVVK 223 (323)
T ss_dssp SHHHHHHHHHHHHHS--------------SEEEEECSSSSCCS--CHH---HHHHHHTCTTEEEECSEEEEEEEESSSEE
T ss_pred CHHHHHHHHHHHHhC--------------CeEEEEEeCCCCCc--CHH---HHHHHHhCCCcEEEeCCEEEEEeccCcee
Confidence 999999999999876 899999987 5554 222 2233334459999999 79999876
Q ss_pred eEEEcC---Cc--EEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCC
Q 018671 166 KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239 (352)
Q Consensus 166 ~v~~~~---g~--~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~ 239 (352)
.|++.+ |+ ++++|.||+++|.+|+ ++++.++++.+++|++.||+++++ +.|+|||+|||+..+ +.++
T Consensus 224 ~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~------~~~~ 296 (323)
T 3f8d_A 224 QVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRT-SVPGVFAAGDCTSAW------LGFR 296 (323)
T ss_dssp EEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBC-SSTTEEECSTTBSTT------TTCC
T ss_pred EEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCcee-cCCCEEEcceecCCC------Cccc
Confidence 477765 76 7999999999999999 688999999999999999999998 999999999999742 2478
Q ss_pred chHHHHHHHHHHHHHHHHHhhh
Q 018671 240 LAQVAERQGKYLFSLLNRIGKA 261 (352)
Q Consensus 240 ~~~~A~~qg~~~a~~i~~~~~~ 261 (352)
++..|..||+.+|+||.+.+..
T Consensus 297 ~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 297 QVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeehhhHHHHHHHHHHHHHHH
Confidence 9999999999999999998873
No 52
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.95 E-value=6.2e-27 Score=228.30 Aligned_cols=192 Identities=26% Similarity=0.365 Sum_probs=162.8
Q ss_pred CeeEeeCCEEEEcCCCCCC-CCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHH
Q 018671 18 WKFKISYDKLVIALGAEAS-TFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 96 (352)
Q Consensus 18 ~~~~i~yD~LViAtGs~~~-~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~ 96 (352)
++.++.||+||||||+.|. .|++||.. .++....+.. .. ...++++|||+|++|+
T Consensus 149 ~~~~~~~d~lviAtG~~p~~~p~i~G~~-~~~~~~~~~~-------------~~----------~~~~~v~ViGgG~~g~ 204 (484)
T 3o0h_A 149 TGERISAEKILIATGAKIVSNSAIKGSD-LCLTSNEIFD-------------LE----------KLPKSIVIVGGGYIGV 204 (484)
T ss_dssp TCCEEEEEEEEECCCEEECCC--CBTGG-GSBCTTTGGG-------------CS----------SCCSEEEEECCSHHHH
T ss_pred CCeEEEeCEEEEccCCCcccCCCCCCcc-ccccHHHHHh-------------HH----------hcCCcEEEECcCHHHH
Confidence 5678999999999999999 89999974 3333322211 11 1235999999999999
Q ss_pred HHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEc
Q 018671 97 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN 170 (352)
Q Consensus 97 e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~ 170 (352)
|+|..+++++ .+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|++++.+ .|.++
T Consensus 205 e~A~~l~~~g--------------~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~ 270 (484)
T 3o0h_A 205 EFANIFHGLG--------------VKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLT 270 (484)
T ss_dssp HHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEET
T ss_pred HHHHHHHHcC--------------CeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEEC
Confidence 9999999877 899999987 7889999999999999999999999998 89998765 57888
Q ss_pred CCcEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHH
Q 018671 171 DGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247 (352)
Q Consensus 171 ~g~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~q 247 (352)
+|+++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+. .++.++.|..|
T Consensus 271 ~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~---------~~~~~~~A~~~ 340 (484)
T 3o0h_A 271 NGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTG---------HIQLTPVAIHD 340 (484)
T ss_dssp TSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGT---------SCCCHHHHHHH
T ss_pred CCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC---------CCcCHHHHHHH
Confidence 99999999999999999995 4 6778999999999999999997 9999999999995 27889999999
Q ss_pred HHHHHHHHHH
Q 018671 248 GKYLFSLLNR 257 (352)
Q Consensus 248 g~~~a~~i~~ 257 (352)
|+++|+||..
T Consensus 341 g~~aa~~i~~ 350 (484)
T 3o0h_A 341 AMCFVKNAFE 350 (484)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHcC
Confidence 9999999974
No 53
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.95 E-value=2.7e-27 Score=231.18 Aligned_cols=193 Identities=18% Similarity=0.193 Sum_probs=160.0
Q ss_pred CCeeEeeCCEEEEcCCCCCCCCCCCCc-cccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHH
Q 018671 17 PWKFKISYDKLVIALGAEASTFGIHGV-KENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTG 95 (352)
Q Consensus 17 ~~~~~i~yD~LViAtGs~~~~~~ipG~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 95 (352)
.++.++.||+||||||+.|..|+++|. .++++ +.++.. .... ..++++|||||++|
T Consensus 130 ~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~---t~~~~~----------~~~~----------~~k~vvViGgG~ig 186 (492)
T 3ic9_A 130 DDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLL---TNDNLF----------ELND----------LPKSVAVFGPGVIG 186 (492)
T ss_dssp TTTEEEEEEEEEECCCEECCCCHHHHTTGGGEE---CHHHHT----------TCSS----------CCSEEEEESSCHHH
T ss_pred cCCcEEEeCEEEEccCCCCcCCCCCCccCCcEE---cHHHHh----------hhhh----------cCCeEEEECCCHHH
Confidence 366789999999999999998876653 22222 222221 1111 23599999999999
Q ss_pred HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC--e--EEE
Q 018671 96 VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K--LIL 169 (352)
Q Consensus 96 ~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~--v~~ 169 (352)
+|+|..|++++ .+|+++++. ++++.+++++.+.+.+.|++. |+++++ +|++++.+ . +.+
T Consensus 187 ~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~ 251 (492)
T 3ic9_A 187 LELGQALSRLG--------------VIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIY 251 (492)
T ss_dssp HHHHHHHHHTT--------------CEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEE
T ss_pred HHHHHHHHHcC--------------CeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEE
Confidence 99999999987 899999997 788999999999999999998 999999 79988653 3 445
Q ss_pred c--CC--cEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccC-CccccCCCCCEEEEccccccccCCCCcCCCCch
Q 018671 170 N--DG--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGID-EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241 (352)
Q Consensus 170 ~--~g--~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd-~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~ 241 (352)
. +| +++++|.|++|+|.+|+. + ++.++++++++|++.|| +++|+ +.|+|||+|||+.. ++.+
T Consensus 252 ~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~---------~~~~ 321 (492)
T 3ic9_A 252 FDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNT---------LTLL 321 (492)
T ss_dssp ECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTS---------SCSH
T ss_pred EeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCC---------CccH
Confidence 4 67 689999999999999995 4 77889999999999999 89998 99999999999952 6789
Q ss_pred HHHHHHHHHHHHHHHH
Q 018671 242 QVAERQGKYLFSLLNR 257 (352)
Q Consensus 242 ~~A~~qg~~~a~~i~~ 257 (352)
+.|..||+++|.||..
T Consensus 322 ~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 322 HEAADDGKVAGTNAGA 337 (492)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999999975
No 54
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.95 E-value=9.5e-27 Score=227.40 Aligned_cols=192 Identities=27% Similarity=0.384 Sum_probs=157.4
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccc--cCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKE--NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
.++.||+||||||+.| +.+||+.+ ....+.+..++. ... ...++|+|||||++|+|
T Consensus 155 ~~~~~d~lViATGs~p--~~ipg~~~~~~~~~~~~~~~~~----------~~~----------~~~~~vvViGgG~~g~E 212 (491)
T 3urh_A 155 QVLEAKNVVIATGSDV--AGIPGVEVAFDEKTIVSSTGAL----------ALE----------KVPASMIVVGGGVIGLE 212 (491)
T ss_dssp EEEECSEEEECCCEEC--CCBTTBCCCCCSSSEECHHHHT----------SCS----------SCCSEEEEECCSHHHHH
T ss_pred EEEEeCEEEEccCCCC--CCCCCcccccCCeeEEehhHhh----------hhh----------hcCCeEEEECCCHHHHH
Confidence 6899999999999986 45788742 112223333221 111 12359999999999999
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcC
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILND 171 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~ 171 (352)
+|..+++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .+.+++
T Consensus 213 ~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~ 278 (491)
T 3urh_A 213 LGSVWARLG--------------AKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEP 278 (491)
T ss_dssp HHHHHHHHT--------------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHcC--------------CEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEe
Confidence 999999887 899999987 7889999999999999999999999999 79888753 255542
Q ss_pred ---C--cEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHH
Q 018671 172 ---G--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243 (352)
Q Consensus 172 ---g--~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~ 243 (352)
| +++++|.||+|+|.+|+. + ++..+++++++|+|.||+++|+ +.|+|||+|||+.. |+++..
T Consensus 279 ~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~ 348 (491)
T 3urh_A 279 VKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVRG---------PMLAHK 348 (491)
T ss_dssp TTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS---------CCCHHH
T ss_pred cCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCC---------ccchhH
Confidence 5 589999999999999995 4 6778999998999999999998 99999999999952 788999
Q ss_pred HHHHHHHHHHHHHH
Q 018671 244 AERQGKYLFSLLNR 257 (352)
Q Consensus 244 A~~qg~~~a~~i~~ 257 (352)
|..||+.+|+||..
T Consensus 349 A~~~g~~aa~~i~g 362 (491)
T 3urh_A 349 AEDEGVAVAEIIAG 362 (491)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999863
No 55
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.95 E-value=8.9e-27 Score=216.04 Aligned_cols=196 Identities=15% Similarity=0.179 Sum_probs=158.2
Q ss_pred CCCeeEeeCCEEEEcCCC---CCCCCCCCCccccC-----cCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEE
Q 018671 16 EPWKFKISYDKLVIALGA---EASTFGIHGVKENA-----TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 87 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs---~~~~~~ipG~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 87 (352)
+.++.++.||+||+|||+ .|+.+++||..++. +.+++.+ ....++|+
T Consensus 102 ~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~-------------------------~~~~~~v~ 156 (335)
T 2zbw_A 102 TSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKA-------------------------EFQGKRVL 156 (335)
T ss_dssp ETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGG-------------------------GGTTCEEE
T ss_pred ECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchh-------------------------hcCCCEEE
Confidence 344568999999999999 57888888874321 1111111 11236999
Q ss_pred EECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC
Q 018671 88 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ 165 (352)
Q Consensus 88 VvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~ 165 (352)
|||+|++|+|+|..|++.+ .+|+++++. .+++ .+...+.+.+.+++.||+++.+ +|++++.+
T Consensus 157 viG~G~~g~e~a~~l~~~g--------------~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~ 220 (335)
T 2zbw_A 157 IVGGGDSAVDWALNLLDTA--------------RRITLIHRRPQFRA--HEASVKELMKAHEEGRLEVLTPYELRRVEGD 220 (335)
T ss_dssp EECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCCS--CHHHHHHHHHHHHTTSSEEETTEEEEEEEES
T ss_pred EECCCHHHHHHHHHHHhhC--------------CEEEEEEcCCccCc--cHHHHHHHHhccccCCeEEecCCcceeEccC
Confidence 9999999999999998765 899999987 4443 3567788888899999999999 89998765
Q ss_pred ----eEEEc---CC--cEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCc
Q 018671 166 ----KLILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKT 235 (352)
Q Consensus 166 ----~v~~~---~g--~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~ 235 (352)
.|.++ +| +++++|.||+|+|.+|+ ++++.++++.+ +|++.||+++|+ +.|+|||+|||+..+.
T Consensus 221 ~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~----- 293 (335)
T 2zbw_A 221 ERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALE-KNKIKVDTTMAT-SIPGVYACGDIVTYPG----- 293 (335)
T ss_dssp SSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEE-TTEEECCTTCBC-SSTTEEECSTTEECTT-----
T ss_pred CCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceecc-CCeeeeCCCCCC-CCCCEEEeccccccCc-----
Confidence 57776 77 57999999999999998 58888888876 689999999997 9999999999997532
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 236 VLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 236 ~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.++++..|..||+.+|+||...+.
T Consensus 294 -~~~~~~~A~~~g~~aa~~i~~~l~ 317 (335)
T 2zbw_A 294 -KLPLIVLGFGEAAIAANHAAAYAN 317 (335)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred -chhhhhhhHHHHHHHHHHHHHHhh
Confidence 267899999999999999998775
No 56
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.95 E-value=9.1e-28 Score=218.50 Aligned_cols=194 Identities=18% Similarity=0.215 Sum_probs=155.3
Q ss_pred ccCCCeeEeeCCEEEEcCCCCCCCCCCCCccccC---cCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEEC
Q 018671 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKENA---TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVG 90 (352)
Q Consensus 14 ~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG 90 (352)
+...++.++.||+||+|||+.|+.|++||..+.. .......+. . ..+.++|+|||
T Consensus 91 v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~----------~------------~~~~~~v~vvG 148 (297)
T 3fbs_A 91 VEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHG----------Y------------ELDQGKIGVIA 148 (297)
T ss_dssp EEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHT----------G------------GGTTCEEEEEC
T ss_pred EEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcc----------h------------hhcCCEEEEEe
Confidence 3344566899999999999999999999985421 111111010 0 11236999999
Q ss_pred CChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEECC-eEEE
Q 018671 91 GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQ-KLIL 169 (352)
Q Consensus 91 gG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~~~-~v~~ 169 (352)
+|++|+|+|..|++. .+|+++++... .+. +.+.+.|++.||+++..+|++++.+ .|.+
T Consensus 149 ~G~~~~e~a~~l~~~---------------g~v~~v~~~~~--~~~----~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~ 207 (297)
T 3fbs_A 149 ASPMAIHHALMLPDW---------------GETTFFTNGIV--EPD----ADQHALLAARGVRVETTRIREIAGHADVVL 207 (297)
T ss_dssp CSTTHHHHHHHGGGT---------------SEEEEECTTTC--CCC----HHHHHHHHHTTCEEECSCEEEEETTEEEEE
T ss_pred cCccHHHHHHHhhhc---------------CcEEEEECCCC--CCC----HHHHHHHHHCCcEEEcceeeeeecCCeEEe
Confidence 999999999998764 28999987632 223 3456788899999996589999987 8999
Q ss_pred cCCcEEecceEEEecCCCcc-hhhhhcCCCCC--CCC-ccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 170 NDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS--PGG-RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 170 ~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~--~~G-~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
++|+++++|.||+++|.+|+ ++++.++++.+ ++| ++.||+++++ +.|+|||+|||+.. |+++..|.
T Consensus 208 ~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~~~~---------~~~~~~A~ 277 (297)
T 3fbs_A 208 ADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDVARP---------AGSVALAV 277 (297)
T ss_dssp TTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGGGCT---------TCCHHHHH
T ss_pred CCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeecCCc---------hHHHHHHH
Confidence 99999999999999999998 58888888776 457 8999999997 99999999999963 78899999
Q ss_pred HHHHHHHHHHHHHhh
Q 018671 246 RQGKYLFSLLNRIGK 260 (352)
Q Consensus 246 ~qg~~~a~~i~~~~~ 260 (352)
.||+.+|.||.+.+.
T Consensus 278 ~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 278 GDGAMAGAAAHRSIL 292 (297)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHh
Confidence 999999999998876
No 57
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.95 E-value=4.6e-27 Score=234.99 Aligned_cols=192 Identities=21% Similarity=0.357 Sum_probs=156.8
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|+.|++||..++.. +.+++ +.... ..++|+|||||++|+|+|
T Consensus 246 ~~~~~d~lviAtGs~p~~p~i~G~~~~~~---~~~~~----------~~~~~----------~~~~vvViGgG~~g~E~A 302 (598)
T 2x8g_A 246 STITGNKIILATGERPKYPEIPGAVEYGI---TSDDL----------FSLPY----------FPGKTLVIGASYVALECA 302 (598)
T ss_dssp EEEEEEEEEECCCEEECCCSSTTHHHHCE---EHHHH----------TTCSS----------CCCSEEEECCSHHHHHHH
T ss_pred EEEEeCEEEEeCCCCCCCCCCCCcccceE---cHHHH----------hhCcc----------CCCEEEEECCCHHHHHHH
Confidence 57999999999999999999999755432 12221 11111 234899999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEE--------C---CeE
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVD--------S---QKL 167 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~--------~---~~v 167 (352)
..|++++ .+|+++++..+++.+++++.+.+.+.|++.||+++++ .+++++ . +.+
T Consensus 303 ~~l~~~g--------------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~ 368 (598)
T 2x8g_A 303 GFLASLG--------------GDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL 368 (598)
T ss_dssp HHHHHTT--------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE
T ss_pred HHHHHcC--------------CEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceE
Confidence 9999887 8899999887888899999999999999999999998 676663 2 333
Q ss_pred E----EcCCcEEe--cceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCC
Q 018671 168 I----LNDGTEVP--YGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238 (352)
Q Consensus 168 ~----~~~g~~i~--~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~ 238 (352)
. +.+|++++ +|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+. + .+
T Consensus 369 ~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~-----~---~~ 439 (598)
T 2x8g_A 369 LVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINA-----G---KP 439 (598)
T ss_dssp EEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBT-----T---SC
T ss_pred EEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCcC-CCCCEEEEeeecC-----C---CC
Confidence 2 35777655 99999999999995 4 4677888888899999999997 9999999999974 2 26
Q ss_pred CchHHHHHHHHHHHHHHHH
Q 018671 239 ALAQVAERQGKYLFSLLNR 257 (352)
Q Consensus 239 ~~~~~A~~qg~~~a~~i~~ 257 (352)
..++.|.+||+.+|+||..
T Consensus 440 ~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 440 QLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHhHHHHHHHHhc
Confidence 7899999999999999964
No 58
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=5.1e-27 Score=227.37 Aligned_cols=188 Identities=28% Similarity=0.409 Sum_probs=155.7
Q ss_pred eEeeCCEEEEcCCCCCCCCC-CCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~-ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.++.||+||||||+.|+.|+ +| ... .+.+.+++.. .. ...++++|||||++|+|+
T Consensus 131 ~~~~~d~lviATGs~p~~~~~~~-~~~---~v~~~~~~~~----------~~----------~~~~~vvViGgG~~g~e~ 186 (458)
T 1lvl_A 131 QRIQCEHLLLATGSSSVELPMLP-LGG---PVISSTEALA----------PK----------ALPQHLVVVGGGYIGLEL 186 (458)
T ss_dssp EEEECSEEEECCCEEECCBTTBC-CBT---TEECHHHHTC----------CS----------SCCSEEEEECCSHHHHHH
T ss_pred EEEEeCEEEEeCCCCCCCCCCCC-ccC---cEecHHHHhh----------hh----------ccCCeEEEECcCHHHHHH
Confidence 68999999999999998765 55 222 2333333321 11 123599999999999999
Q ss_pred HHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCeEEEc--CC--
Q 018671 99 SGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN--DG-- 172 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~~--~g-- 172 (352)
|..|++++ .+|+++++. .++|.+++++.+.+.+.|++.||+++++ +|++++.+.+.+. +|
T Consensus 187 A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~ 252 (458)
T 1lvl_A 187 GIAYRKLG--------------AQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQ 252 (458)
T ss_dssp HHHHHHHT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCC
T ss_pred HHHHHHCC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCce
Confidence 99999887 899999997 7889999999999999999999999999 8999987545554 56
Q ss_pred cEEecceEEEecCCCcch-h--hhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHH
Q 018671 173 TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249 (352)
Q Consensus 173 ~~i~~D~vi~a~G~~~~~-~--~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~ 249 (352)
+++++|.||+|+|.+|+. + ++.++++++++ +|.||+++|+ +.|+|||+|||+.. +++++.|.+||+
T Consensus 253 ~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~~~g~ 321 (458)
T 1lvl_A 253 LRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGE---------PMLAHRAMAQGE 321 (458)
T ss_dssp CEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCS---------SCCHHHHHHHHH
T ss_pred EEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCC---------cccHHHHHHHHH
Confidence 689999999999999994 3 57778887776 8999999997 89999999999962 678899999999
Q ss_pred HHHHHHH
Q 018671 250 YLFSLLN 256 (352)
Q Consensus 250 ~~a~~i~ 256 (352)
.+|+||.
T Consensus 322 ~aa~~i~ 328 (458)
T 1lvl_A 322 MVAEIIA 328 (458)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999985
No 59
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.95 E-value=6.1e-27 Score=216.47 Aligned_cols=197 Identities=19% Similarity=0.253 Sum_probs=150.9
Q ss_pred cCCCeeEeeCCEEEEcCCCCCCCCCCCCccccCc-CCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCCh
Q 018671 15 LEPWKFKISYDKLVIALGAEASTFGIHGVKENAT-FLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGP 93 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~ 93 (352)
.+.++.++.||+||+|||+.|+.|++||..++.. .+...... +. . ....++|+|||+|+
T Consensus 103 ~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~----~~----~------------~~~~~~v~VvG~G~ 162 (325)
T 2q7v_A 103 VRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATC----DG----F------------FYKGKKVVVIGGGD 162 (325)
T ss_dssp EEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHH----HG----G------------GGTTCEEEEECCSH
T ss_pred EECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccC----CH----H------------HcCCCEEEEECCCH
Confidence 3445668999999999999999999999754210 11111110 00 0 11236999999999
Q ss_pred HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHH-hCCCEEEeC-ceEEEECC----eE
Q 018671 94 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS-KSGVRLVRG-IVKDVDSQ----KL 167 (352)
Q Consensus 94 ~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~-~~gV~v~~~-~V~~v~~~----~v 167 (352)
+|+|+|..|++.+ .+|+++++.+.+. ..+. +.+.+. +.||+++++ +|++++.+ .|
T Consensus 163 ~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~----~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v 223 (325)
T 2q7v_A 163 AAVEEGMFLTKFA--------------DEVTVIHRRDTLR-ANKV----AQARAFANPKMKFIWDTAVEEIQGADSVSGV 223 (325)
T ss_dssp HHHHHHHHHTTTC--------------SEEEEECSSSSCC-SCHH----HHHHHHTCTTEEEECSEEEEEEEESSSEEEE
T ss_pred HHHHHHHHHHhcC--------------CEEEEEeCCCcCC-cchH----HHHHHHhcCCceEecCCceEEEccCCcEEEE
Confidence 9999999998776 8999999874332 2333 233444 469999999 89999765 57
Q ss_pred EEc---CCc--EEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCch
Q 018671 168 ILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241 (352)
Q Consensus 168 ~~~---~g~--~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~ 241 (352)
.++ +|+ ++++|.||+|+|++|+ +++..+ ++.+++|++.||+++|+ +.|+|||+|||+.. .++++
T Consensus 224 ~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~ 293 (325)
T 2q7v_A 224 KLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYT-NIPMLFAAGDVSDY--------IYRQL 293 (325)
T ss_dssp EEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBC-SSTTEEECSTTTCS--------SCCCH
T ss_pred EEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCcc-CCCCEEEeecccCc--------cHHHH
Confidence 775 675 7999999999999999 577766 77788899999999997 99999999999963 26789
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 018671 242 QVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 242 ~~A~~qg~~~a~~i~~~~~ 260 (352)
..|.+||+.+|.||...+.
T Consensus 294 ~~A~~~g~~aa~~i~~~l~ 312 (325)
T 2q7v_A 294 ATSVGAGTRAAMMTERQLA 312 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998876
No 60
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.95 E-value=3e-26 Score=223.03 Aligned_cols=192 Identities=21% Similarity=0.323 Sum_probs=157.0
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 99 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 99 (352)
.++.||+||||||+.|..|+.++.... .+.+..++ +... ...++++|||+|++|+|+|
T Consensus 139 ~~~~~d~lvlAtG~~p~~~~~~~~~~~--~v~~~~~~----------~~~~----------~~~~~v~ViGgG~~g~e~A 196 (476)
T 3lad_A 139 QVLDTENVILASGSKPVEIPPAPVDQD--VIVDSTGA----------LDFQ----------NVPGKLGVIGAGVIGLELG 196 (476)
T ss_dssp EEECCSCEEECCCEEECCCTTSCCCSS--SEEEHHHH----------TSCS----------SCCSEEEEECCSHHHHHHH
T ss_pred EEEEcCEEEEcCCCCCCCCCCCCCCcc--cEEechhh----------hccc----------cCCCeEEEECCCHHHHHHH
Confidence 589999999999999887655553211 11122221 1111 1235999999999999999
Q ss_pred HHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCC-
Q 018671 100 GELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDG- 172 (352)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g- 172 (352)
..+++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++++.+ .+.+.++
T Consensus 197 ~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~ 262 (476)
T 3lad_A 197 SVWARLG--------------AEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAE 262 (476)
T ss_dssp HHHHHTT--------------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSS
T ss_pred HHHHHcC--------------CcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCC
Confidence 9999887 899999997 7889999999999999999999999999 89998743 3566654
Q ss_pred --cEEecceEEEecCCCcch---hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHH
Q 018671 173 --TEVPYGLLVWSTGVGPST---LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 247 (352)
Q Consensus 173 --~~i~~D~vi~a~G~~~~~---~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~q 247 (352)
+++++|.||+|+|.+|+. .++.++++++++|+|.||+++|+ +.|+|||+|||+.. |..++.|..|
T Consensus 263 g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~~~ 332 (476)
T 3lad_A 263 GEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVRG---------AMLAHKASEE 332 (476)
T ss_dssp EEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS---------CCCHHHHHHH
T ss_pred CcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEccCCC---------cccHHHHHHH
Confidence 679999999999999984 26778888888999999999997 99999999999941 6789999999
Q ss_pred HHHHHHHHHH
Q 018671 248 GKYLFSLLNR 257 (352)
Q Consensus 248 g~~~a~~i~~ 257 (352)
|+++|+||..
T Consensus 333 g~~aa~~i~g 342 (476)
T 3lad_A 333 GVVVAERIAG 342 (476)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcC
Confidence 9999999964
No 61
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.94 E-value=4.4e-27 Score=216.82 Aligned_cols=196 Identities=18% Similarity=0.173 Sum_probs=152.5
Q ss_pred CCeeEeeCCEEEEcCCCCCCCCCCCCccccCc-CCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHH
Q 018671 17 PWKFKISYDKLVIALGAEASTFGIHGVKENAT-FLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTG 95 (352)
Q Consensus 17 ~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 95 (352)
.++.++.||+||+|||+.|+.|++||..++.. .+...... +. .....++|+|||+|++|
T Consensus 108 ~~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~----~~----------------~~~~~~~v~viG~G~~g 167 (319)
T 3cty_A 108 TNDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTC----DG----------------YLFKGKRVVTIGGGNSG 167 (319)
T ss_dssp ESSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH----HG----------------GGGBTSEEEEECCSHHH
T ss_pred ECCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEec----ch----------------hhcCCCeEEEECCCHHH
Confidence 35568999999999999999999998743210 11111110 00 01223699999999999
Q ss_pred HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEEE
Q 018671 96 VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLIL 169 (352)
Q Consensus 96 ~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~ 169 (352)
+|+|..|++++ .+|+++++.+.+. .++ .+.+.+++.||+++.+ +|++++.+ .+.+
T Consensus 168 ~e~a~~l~~~g--------------~~V~~i~~~~~~~-~~~----~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~ 228 (319)
T 3cty_A 168 AIAAISMSEYV--------------KNVTIIEYMPKYM-CEN----AYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKY 228 (319)
T ss_dssp HHHHHHHTTTB--------------SEEEEECSSSSCC-SCH----HHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEE
T ss_pred HHHHHHHHhhC--------------CcEEEEEcCCccC-CCH----HHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEE
Confidence 99999998876 8999999874332 233 3455667899999999 89998764 4666
Q ss_pred c---CCc--EEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHH
Q 018671 170 N---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 243 (352)
Q Consensus 170 ~---~g~--~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~ 243 (352)
. +|+ ++++|.||+|+|++|+ +++..++++++++|++.||+++|+ +.|+|||+|||+.. .++.+..
T Consensus 229 ~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~~~ 299 (319)
T 3cty_A 229 KDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRT-SVPGVYAAGDVTSG--------NFAQIAS 299 (319)
T ss_dssp EETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBC-SSTTEEECSTTBTT--------CCCCHHH
T ss_pred EEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCcc-CCCCEEEeecccCc--------chhhHHH
Confidence 5 675 6999999999999999 588888888888899999999997 99999999999962 2578999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 018671 244 AERQGKYLFSLLNRIGK 260 (352)
Q Consensus 244 A~~qg~~~a~~i~~~~~ 260 (352)
|+.||+.+|.||...+.
T Consensus 300 A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 300 AVGDGCKAALSLYSDSI 316 (319)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998775
No 62
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.94 E-value=5.6e-27 Score=215.15 Aligned_cols=194 Identities=19% Similarity=0.190 Sum_probs=151.9
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCcccc----CcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECC
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVKEN----ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 91 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGg 91 (352)
..++.++.||+||+|||+.|+.|++||..++ .+.....+ . .....++|+|||+
T Consensus 95 ~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~-------~----------------~~~~~~~v~VvG~ 151 (311)
T 2q0l_A 95 AEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD-------G----------------FFYKNKEVAVLGG 151 (311)
T ss_dssp ETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH-------G----------------GGGTTSEEEEECC
T ss_pred EcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC-------h----------------hhcCCCEEEEECC
Confidence 4556689999999999999999999997532 12211110 0 0112369999999
Q ss_pred ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHH-hCCCEEEeC-ceEEEECC----
Q 018671 92 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS-KSGVRLVRG-IVKDVDSQ---- 165 (352)
Q Consensus 92 G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~-~~gV~v~~~-~V~~v~~~---- 165 (352)
|++|+|+|..|++.+ .+|+++++.+.++ .++. +.+.+. +.||+++++ +|++++.+
T Consensus 152 G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~~~~v 212 (311)
T 2q0l_A 152 GDTAVEEAIYLANIC--------------KKVYLIHRRDGFR-CAPI----TLEHAKNNDKIEFLTPYVVEEIKGDASGV 212 (311)
T ss_dssp SHHHHHHHHHHHTTS--------------SEEEEECSSSSCC-SCHH----HHHHHHTCTTEEEETTEEEEEEEEETTEE
T ss_pred CHHHHHHHHHHHhcC--------------CEEEEEeeCCccC-CCHH----HHHHHhhCCCeEEEeCCEEEEEECCCCcE
Confidence 999999999998876 8999999874332 3333 334454 479999999 79988754
Q ss_pred -eEEEc---CCc--EEecceEEEecCCCcc-hhhhhcC----CCCCCCCccccCCccccCCCCCEEEEccccccccCCCC
Q 018671 166 -KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLD----LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK 234 (352)
Q Consensus 166 -~v~~~---~g~--~i~~D~vi~a~G~~~~-~~~~~~~----l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~ 234 (352)
.+.++ +|+ ++++|.||+|+|.+|+ +++..++ ++++++|++.||+++|+ +.|+|||+|||+..
T Consensus 213 ~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~------ 285 (311)
T 2q0l_A 213 SSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKT-NVQGLFAAGDIRIF------ 285 (311)
T ss_dssp EEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECSTTBTT------
T ss_pred eEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCcccc-CCCCeEEcccccCc------
Confidence 46776 675 7999999999999998 5777764 77888899999999998 99999999999963
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 235 TVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 235 ~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.|+++..|..||+.+|.||.+.+.
T Consensus 286 --~~~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 286 --APKQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --chHHHHHHHHhHHHHHHHHHHHHh
Confidence 267899999999999999988765
No 63
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.94 E-value=4.7e-27 Score=215.55 Aligned_cols=199 Identities=19% Similarity=0.196 Sum_probs=152.8
Q ss_pred cCCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 15 LEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
+.+++ ++.||+||+|||+.|+.|++||..++. ...+........ .....++++|||+|++
T Consensus 99 ~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~--~~~~~~~~~~~~-----------------~~~~~~~v~viG~g~~ 158 (315)
T 3r9u_A 99 LEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFF--GKGVSTCATCDG-----------------FFYKNKEVAVLGGGDT 158 (315)
T ss_dssp ETTSC-EEEEEEEEECCCEEECCCCCBTTTTTB--TTTEESCHHHHG-----------------GGGTTSEEEEECCBHH
T ss_pred EecCC-EEEeCEEEEeeCCCCCCCCCCChhhcC--CCeEEeeecccc-----------------cccCcCEEEEECCCHH
Confidence 45555 899999999999999999999975421 111111111000 0122369999999999
Q ss_pred HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe-----EE
Q 018671 95 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK-----LI 168 (352)
Q Consensus 95 g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~-----v~ 168 (352)
|+|+|..|.+.+ .+|+++++...++ ..+. ...+.+++.||+++++ +|++++.+. +.
T Consensus 159 ~~e~a~~l~~~g--------------~~v~~~~~~~~~~-~~~~---~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~ 220 (315)
T 3r9u_A 159 ALEEALYLANIC--------------SKIYLIHRRDEFR-AAPS---TVEKVKKNEKIELITSASVDEVYGDKMGVAGVK 220 (315)
T ss_dssp HHHHHHHHHTTS--------------SEEEEECSSSSCB-SCHH---HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHhhC--------------CEEEEEEeCCCCC-CCHH---HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEE
Confidence 999999998876 8999999874332 2333 3345557889999998 899887643 66
Q ss_pred Ec--CCc--EEecceEEEecCCCcch-hhhh---cC-CCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCC
Q 018671 169 LN--DGT--EVPYGLLVWSTGVGPST-LVKS---LD-LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239 (352)
Q Consensus 169 ~~--~g~--~i~~D~vi~a~G~~~~~-~~~~---~~-l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~ 239 (352)
+. +|+ ++++|.+|+++|.+|+. ++.. ++ ++.+++|++.||+++|+ +.|+|||+|||+.. .|+
T Consensus 221 ~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~~~~--------~~~ 291 (315)
T 3r9u_A 221 VKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT-SVAGLFAAGDLRKD--------APK 291 (315)
T ss_dssp EECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECGGGBTT--------CCC
T ss_pred EEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc-CCCCEEEeecccCC--------chh
Confidence 66 775 79999999999999995 5444 44 88888899999999998 99999999999852 278
Q ss_pred chHHHHHHHHHHHHHHHHHhh
Q 018671 240 LAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 240 ~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.+..|+.||+.+|.||.+.+.
T Consensus 292 ~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 292 QVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHhhHHHHHHHHHHHHH
Confidence 899999999999999998876
No 64
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.94 E-value=8.4e-27 Score=214.72 Aligned_cols=200 Identities=21% Similarity=0.208 Sum_probs=155.5
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCccccC-cCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
..++.++.||+||+|||+.|..|++||..++. ..+.+.... ... ....++|+|||+|++
T Consensus 97 ~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~---~~~-----------------~~~~~~v~ViG~G~~ 156 (320)
T 1trb_A 97 NGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATS---DGF-----------------FYRNQKVAVIGGGNT 156 (320)
T ss_dssp EESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHH---HGG-----------------GGTTSEEEEECSSHH
T ss_pred EeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccC---Ccc-----------------ccCCCeEEEECCCHH
Confidence 34566899999999999999998899874321 011111111 000 022359999999999
Q ss_pred HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe-----EE
Q 018671 95 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK-----LI 168 (352)
Q Consensus 95 g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~-----v~ 168 (352)
|+|+|..|++++ .+|+++++...+. .++.+.+.+.+.+++.||+++++ +|++++.+. |.
T Consensus 157 g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~ 221 (320)
T 1trb_A 157 AVEEALYLSNIA--------------SEVHLIHRRDGFR-AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVR 221 (320)
T ss_dssp HHHHHHHHTTTS--------------SEEEEECSSSSCC-CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEE
T ss_pred HHHHHHHHHhcC--------------CeEEEEEeCCccc-cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEE
Confidence 999999998876 8999999874332 36778888889999999999999 899997653 77
Q ss_pred EcC----C--cEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCcc----ccCCCCCEEEEccccccccCCCCcCC
Q 018671 169 LND----G--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWL----RVPSVQDVFAVGDCSGYLESTGKTVL 237 (352)
Q Consensus 169 ~~~----g--~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l----~~~~~~~IfaiGD~a~~~~~~~~~~~ 237 (352)
+++ | +++++|.||+|+|.+|+. ++. .+++.+ +|++.||+++ +.++.|+|||+|||+.. .
T Consensus 222 ~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~--------~ 291 (320)
T 1trb_A 222 LRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDH--------I 291 (320)
T ss_dssp EECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCS--------S
T ss_pred EEeccCCCceEEEEcCEEEEEeCCCCChHHhc-cccccc-CceEEECCCcccccccCCCCCEEEcccccCC--------c
Confidence 765 4 579999999999999985 554 567777 8999999987 23489999999999963 2
Q ss_pred CCchHHHHHHHHHHHHHHHHHhh
Q 018671 238 PALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 238 ~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
++.+..|..||+.+|.||...+.
T Consensus 292 ~~~~~~A~~~g~~aa~~i~~~l~ 314 (320)
T 1trb_A 292 YRQAITSAGTGCMAALDAERYLD 314 (320)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhhhhccHHHHHHHHHHHHH
Confidence 57899999999999999999876
No 65
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.94 E-value=2.1e-26 Score=211.17 Aligned_cols=197 Identities=21% Similarity=0.264 Sum_probs=150.3
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHH
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTG 95 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 95 (352)
..++.++.||+||+|||+.|..|++||..++.. +.+.....+.. .....++|+|||+|++|
T Consensus 96 ~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~--~~~~~~~~~~~-----------------~~~~~~~v~VvG~G~~g 156 (310)
T 1fl2_A 96 TASGAVLKARSIIVATGAKWRNMNVPGEDQYRT--KGVTYCPHCDG-----------------PLFKGKRVAVIGGGNSG 156 (310)
T ss_dssp ETTSCEEEEEEEEECCCEEECCCCCTTTTTTBT--TTEESCHHHHG-----------------GGGBTCEEEEECCSHHH
T ss_pred ECCCCEEEeCEEEECcCCCcCCCCCCChhhccc--ceeEEeccCcH-----------------hhcCCCEEEEECCCHHH
Confidence 344568999999999999999889999754211 11111111100 01234699999999999
Q ss_pred HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHh-CCCEEEeC-ceEEEECC-----eEE
Q 018671 96 VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK-SGVRLVRG-IVKDVDSQ-----KLI 168 (352)
Q Consensus 96 ~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~-~gV~v~~~-~V~~v~~~-----~v~ 168 (352)
+|+|.+|++.+ .+|+++++.+.+. ++ +.+.+.|++ .||+++++ +|++++++ .+.
T Consensus 157 ~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~ 217 (310)
T 1fl2_A 157 VEAAIDLAGIV--------------EHVTLLEFAPEMK-AD----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLE 217 (310)
T ss_dssp HHHHHHHHTTB--------------SEEEEECSSSSCC-SC----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEE
T ss_pred HHHHHHHHHhC--------------CEEEEEEeCcccC-cc----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEE
Confidence 99999998876 8999999874332 33 334566777 69999999 89998764 466
Q ss_pred EcC---Cc--EEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchH
Q 018671 169 LND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242 (352)
Q Consensus 169 ~~~---g~--~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~ 242 (352)
+.+ |+ ++++|.||+|+|.+|+ +++.+. ++++++|++.||+++|+ +.|+|||+|||+.. .++++.
T Consensus 218 ~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~~ 287 (310)
T 1fl2_A 218 YRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCET-NVKGVFAAGDCTTV--------PYKQII 287 (310)
T ss_dssp EEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBC-SSTTEEECSTTBSC--------SSCCHH
T ss_pred EEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCcc-CCCCEEEeecccCC--------cchhhh
Confidence 653 53 6899999999999998 466653 77788899999999996 99999999999963 146788
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018671 243 VAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 243 ~A~~qg~~~a~~i~~~~~ 260 (352)
.|+.||+.+|.||...+.
T Consensus 288 ~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 288 IATGEGAKASLSAFDYLI 305 (310)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhHhhHHHHHHHHHHHHH
Confidence 999999999999998876
No 66
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.94 E-value=8.1e-27 Score=215.57 Aligned_cols=197 Identities=15% Similarity=0.187 Sum_probs=154.9
Q ss_pred ccCCCeeEeeCCEEEEcCCC---CCCCCCCCCcccc---CcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEE
Q 018671 14 TLEPWKFKISYDKLVIALGA---EASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 87 (352)
Q Consensus 14 ~~~~~~~~i~yD~LViAtGs---~~~~~~ipG~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 87 (352)
.+..+..++.||+||+|||+ .|+.+++||..++ .... .+.+. ..-+.++++
T Consensus 102 ~v~~~~g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~----------------------~~~~~~~v~ 158 (332)
T 3lzw_A 102 KLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDL----------------------QKFAGRRVA 158 (332)
T ss_dssp EEEESSEEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCG----------------------GGGBTCEEE
T ss_pred EEEECCCEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCH----------------------HHcCCCEEE
Confidence 34434445999999999999 8999999998541 1111 11111 111246999
Q ss_pred EECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe
Q 018671 88 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK 166 (352)
Q Consensus 88 VvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~ 166 (352)
|||+|++|+|+|..|++.+ .+|+++++...+...++. .+.|++.||+++.+ +|++++.+.
T Consensus 159 vvG~g~~~~e~a~~l~~~~--------------~~v~~~~~~~~~~~~~~~-----~~~l~~~gv~~~~~~~v~~i~~~~ 219 (332)
T 3lzw_A 159 ILGGGDSAVDWALMLEPIA--------------KEVSIIHRRDKFRAHEHS-----VENLHASKVNVLTPFVPAELIGED 219 (332)
T ss_dssp EECSSHHHHHHHHHHTTTB--------------SEEEEECSSSSCSSCHHH-----HHHHHHSSCEEETTEEEEEEECSS
T ss_pred EECCCHhHHHHHHHHHhhC--------------CeEEEEEecCcCCccHHH-----HHHHhcCCeEEEeCceeeEEecCC
Confidence 9999999999999998765 899999987433333332 34578899999998 899998763
Q ss_pred ----EEEcC-----CcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcC
Q 018671 167 ----LILND-----GTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV 236 (352)
Q Consensus 167 ----v~~~~-----g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~ 236 (352)
|.+.+ ++++++|.||+|+|.+|+ ++++.++++. ++|++.||+++|+ +.|+|||+|||+..+.
T Consensus 220 ~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~~------ 291 (332)
T 3lzw_A 220 KIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKSTMET-NIEGFFAAGDICTYEG------ 291 (332)
T ss_dssp SCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCE-ETTEEECCTTSBC-SSTTEEECGGGEECTT------
T ss_pred ceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccc-cCCeEEeCCCCce-ecCCEEEccceecCCC------
Confidence 77765 467999999999999998 5888888887 6799999999998 9999999999996532
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhh
Q 018671 237 LPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 237 ~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.|+++..|..||+.+|+||...+.
T Consensus 292 ~~~~~~~A~~~g~~aa~~i~~~l~ 315 (332)
T 3lzw_A 292 KVNLIASGFGEAPTAVNNAKAYMD 315 (332)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CcceEeeehhhHHHHHHHHHHhhC
Confidence 388999999999999999998875
No 67
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.94 E-value=8.3e-27 Score=214.40 Aligned_cols=199 Identities=19% Similarity=0.207 Sum_probs=146.3
Q ss_pred cccccCCCeeEeeCCEEEEcCCCCCCCCCCCCccccC---cCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEE
Q 018671 11 ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA---TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 87 (352)
Q Consensus 11 ~~~~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 87 (352)
..+.++.++.++.||+||||||++|+.|++||.++.. .......+. . ....++|+
T Consensus 92 ~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~----------~------------~~~~k~vv 149 (312)
T 4gcm_A 92 EYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDG----------A------------FFKNKRLF 149 (312)
T ss_dssp SCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHG----------G------------GGTTCEEE
T ss_pred cceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCc----------c------------ccCCCEEE
Confidence 3445667778999999999999999999999975421 111111110 0 11236999
Q ss_pred EECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEE--
Q 018671 88 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVD-- 163 (352)
Q Consensus 88 VvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~-- 163 (352)
|||||++|+|+|..|++++ .+|+++++. ++++... ...+.+++.++..... .+..+.
T Consensus 150 ViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (312)
T 4gcm_A 150 VIGGGDSAVEEGTFLTKFA--------------DKVTIVHRRDELRAQRI-----LQDRAFKNDKIDFIWSHTLKSINEK 210 (312)
T ss_dssp EECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCCSCHH-----HHHHHHHCTTEEEECSEEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHhcC--------------CEEEEEecccccCcchh-----HHHHHHHhcCcceeeecceeeeecc
Confidence 9999999999999999887 899999987 5655321 2235566777777665 333322
Q ss_pred CC---e--EE-Ec--CCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCC
Q 018671 164 SQ---K--LI-LN--DGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK 234 (352)
Q Consensus 164 ~~---~--v~-~~--~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~ 234 (352)
.. . .. .. ++..+++|.+++++|..|+. +...+++. +++|+|.||+++|| +.|+|||+|||+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~-~~~G~I~vd~~~~T-s~pgIyA~GDv~~~------ 282 (312)
T 4gcm_A 211 DGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGIT-NDVGYIVTKDDMTT-SVPGIFAAGDVRDK------ 282 (312)
T ss_dssp TTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCB-CTTSCBCCCTTSBC-SSTTEEECSTTBSC------
T ss_pred ccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhccee-cCCCeEeeCCCCcc-CCCCEEEEeecCCC------
Confidence 11 1 11 12 33579999999999999995 67777764 56799999999998 99999999999852
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 235 TVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 235 ~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.++++..|+.||+.||+||.+.++
T Consensus 283 --~~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 283 --GLRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp --SCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred --cchHHHHHHHHHHHHHHHHHHHHH
Confidence 267889999999999999988775
No 68
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.94 E-value=2.1e-26 Score=211.11 Aligned_cols=199 Identities=12% Similarity=0.159 Sum_probs=150.8
Q ss_pred cccCCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC
Q 018671 13 RTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG 92 (352)
Q Consensus 13 ~~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG 92 (352)
.+.+.++.++.||+||||||++|+.|++||.++.. .+.+....... .+ ..+.++++|||||
T Consensus 95 ~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~--~~~v~~~~~~~-----~~------------~~~~~~~~VIggG 155 (304)
T 4fk1_A 95 EIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYY--GKSLFSCPYCD-----GW------------ELKDQPLIIISEN 155 (304)
T ss_dssp EEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHB--TTTEESCHHHH-----SG------------GGTTSCEEEECCS
T ss_pred EEEECCCCEEEeCEEEEccCCccccccccCccccc--cceeeeccccc-----hh------------HhcCCceeeecCC
Confidence 45667788999999999999999999999975421 11111111100 00 0123478888887
Q ss_pred hH-HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEECC-----e
Q 018671 93 PT-GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQ-----K 166 (352)
Q Consensus 93 ~~-g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~~~-----~ 166 (352)
.. ++|+|..+..++ .+|+++++...+. +.+.+.|++.|++++.+.++.+..+ .
T Consensus 156 ~~~~~e~a~~~~~~~--------------~~v~i~~~~~~~~-------~~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~ 214 (304)
T 4fk1_A 156 EDHTLHMTKLVYNWS--------------TDLVIATNGNELS-------QTIMDELSNKNIPVITESIRTLQGEGGYLKK 214 (304)
T ss_dssp HHHHHHHHHHHTTTC--------------SCEEEECSSCCCC-------HHHHHHHHTTTCCEECSCEEEEESGGGCCCE
T ss_pred CchhhhHHHHHHhCC--------------ceEEEEeccccch-------hhhhhhhhccceeEeeeeEEEeecCCCeeee
Confidence 65 567777776655 7899998764331 2355678889999998888877764 5
Q ss_pred EEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 167 LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 167 v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
|.+++|+++++|.+++++|.+|+ +++.+++++++++|+|.||+++|| +.|+|||+|||+.. .++++..|+
T Consensus 215 v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~T-s~p~IyA~GDv~~~--------~~~~~~~A~ 285 (304)
T 4fk1_A 215 VEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRT-SEKNIYLAGETTTQ--------GPSSLIIAA 285 (304)
T ss_dssp EEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBC-SSTTEEECSHHHHT--------SCCCHHHHH
T ss_pred eeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCcc-CCCCEEEEeccCCC--------cchHHHHHH
Confidence 88899999999988888776665 688999999999999999999998 99999999999962 256788999
Q ss_pred HHHHHHHHHHHHHhh
Q 018671 246 RQGKYLFSLLNRIGK 260 (352)
Q Consensus 246 ~qg~~~a~~i~~~~~ 260 (352)
.||+.||.+|.+.+.
T Consensus 286 ~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 286 SQGNKAAIAINSDIT 300 (304)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988775
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.93 E-value=3.6e-26 Score=211.70 Aligned_cols=196 Identities=17% Similarity=0.204 Sum_probs=150.6
Q ss_pred CeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 18 ~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
++.++.||+||+|||+.|+.|++||..++.. ..+.........+ .....++++|||+|++|+|
T Consensus 125 ~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~---------------~~~~~~~v~vvG~G~~g~e 187 (338)
T 3itj_A 125 DAEPVTTDAIILATGASAKRMHLPGEETYWQ--KGISACAVCDGAV---------------PIFRNKPLAVIGGGDSACE 187 (338)
T ss_dssp SSCCEEEEEEEECCCEEECCCCCTTHHHHBT--TTEESCHHHHTTS---------------GGGTTSEEEEECSSHHHHH
T ss_pred CCcEEEeCEEEECcCCCcCCCCCCCchhccC--ccEEEchhcccch---------------hhcCCCEEEEECCCHHHHH
Confidence 5678999999999999999999999753211 1111111111000 0123469999999999999
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhC-CCEEEeC-ceEEEECCe-----EEE
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKS-GVRLVRG-IVKDVDSQK-----LIL 169 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~-gV~v~~~-~V~~v~~~~-----v~~ 169 (352)
+|..|++++ .+|+++++. .+++ .+.+.+.+.+. ||+++.+ +|++++.+. |.+
T Consensus 188 ~a~~l~~~g--------------~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~ 247 (338)
T 3itj_A 188 EAQFLTKYG--------------SKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRI 247 (338)
T ss_dssp HHHHHTTTS--------------SEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEE
T ss_pred HHHHHHhcC--------------CEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEE
Confidence 999998876 899999987 4443 23445566665 9999999 899997653 777
Q ss_pred cC-----CcEEecceEEEecCCCcch-hhhhcCCCCCCCCcccc-CCccccCCCCCEEEEccccccccCCCCcCCCCchH
Q 018671 170 ND-----GTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGI-DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242 (352)
Q Consensus 170 ~~-----g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~V-d~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~ 242 (352)
++ ++++++|.||+|+|.+|+. ++.. +++++++|++.| |+++++ +.|+|||+|||+.. .|+.+.
T Consensus 248 ~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t-~~~~vya~GD~~~~--------~~~~~~ 317 (338)
T 3itj_A 248 KNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLT-SVPGFFAAGDVQDS--------KYRQAI 317 (338)
T ss_dssp EETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBC-SSTTEEECGGGGCS--------SCCCHH
T ss_pred EECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCccccc-CCCCEEEeeccCCC--------Ccccee
Confidence 65 4679999999999999995 5544 888888999996 778887 99999999999962 278899
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018671 243 VAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 243 ~A~~qg~~~a~~i~~~~~ 260 (352)
.|+.||+.+|.||.+.+.
T Consensus 318 ~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 318 TSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred eehhhhHHHHHHHHHHHh
Confidence 999999999999998875
No 70
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.93 E-value=9.8e-26 Score=208.86 Aligned_cols=201 Identities=19% Similarity=0.206 Sum_probs=150.1
Q ss_pred CCeeEeeCCEEEEcCCCCCCCCCCCCcccc--CcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 17 PWKFKISYDKLVIALGAEASTFGIHGVKEN--ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 17 ~~~~~i~yD~LViAtGs~~~~~~ipG~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
.++.++.||+||+|||+.|..|++||..+. .+..+.+..+...... + .....++|+|||+|++
T Consensus 106 ~~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~v~VvG~G~~ 170 (333)
T 1vdc_A 106 TDSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGA----A-----------PIFRNKPLAVIGGGDS 170 (333)
T ss_dssp CSSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTT----S-----------GGGTTSEEEEECCSHH
T ss_pred ECCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccc----h-----------hhcCCCeEEEECCChH
Confidence 366789999999999999999999997542 1222222221111110 0 0023469999999999
Q ss_pred HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe-------
Q 018671 95 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK------- 166 (352)
Q Consensus 95 g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~------- 166 (352)
|+|+|..|++++ .+|+++++.+.+.. .+.+ ..+.+++.||+++++ +|++++.+.
T Consensus 171 g~e~A~~l~~~g--------------~~V~lv~~~~~~~~-~~~~---~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~ 232 (333)
T 1vdc_A 171 AMEEANFLTKYG--------------SKVYIIHRRDAFRA-SKIM---QQRALSNPKIDVIWNSSVVEAYGDGERDVLGG 232 (333)
T ss_dssp HHHHHHHHTTTS--------------SEEEEECSSSSCCS-CHHH---HHHHHTCTTEEEECSEEEEEEEESSSSSSEEE
T ss_pred HHHHHHHHHhcC--------------CeEEEEecCCcCCc-cHHH---HHHHHhCCCeeEecCCceEEEeCCCCccceee
Confidence 999999998765 89999998743321 2222 224456789999998 899987643
Q ss_pred EEEc---CC--cEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCcc-ccCCCCCEEEEccccccccCCCCcCCCC
Q 018671 167 LILN---DG--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWL-RVPSVQDVFAVGDCSGYLESTGKTVLPA 239 (352)
Q Consensus 167 v~~~---~g--~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l-~~~~~~~IfaiGD~a~~~~~~~~~~~~~ 239 (352)
+.++ +| +++++|.||+|+|.+|+. ++. .+++.+++|++.||+++ ++ +.|+|||+|||+.. .++
T Consensus 233 v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t-~~~~vya~GD~~~~--------~~~ 302 (333)
T 1vdc_A 233 LKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTTQT-SVPGVFAAGDVQDK--------KYR 302 (333)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSCBC-SSTTEEECGGGGCS--------SCC
T ss_pred EEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhccc-CCCCEEEeeeccCC--------Cch
Confidence 7775 45 579999999999999995 544 56777888999999975 55 99999999999963 257
Q ss_pred chHHHHHHHHHHHHHHHHHhh
Q 018671 240 LAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 240 ~~~~A~~qg~~~a~~i~~~~~ 260 (352)
++..|..||+.+|.||.+.+.
T Consensus 303 ~~~~A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 303 QAITAAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhHHHHHHHHHHHHH
Confidence 899999999999999999886
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.93 E-value=1.1e-25 Score=210.99 Aligned_cols=197 Identities=18% Similarity=0.200 Sum_probs=155.7
Q ss_pred cCCCeeEeeCCEEEEcCCC---CCCCCCCCC-ccccC-----cCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCc
Q 018671 15 LEPWKFKISYDKLVIALGA---EASTFGIHG-VKENA-----TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLH 85 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtGs---~~~~~~ipG-~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (352)
.+.++.++.||+||+|||+ .|..+++|| ..+.. +.+++.+ ....++
T Consensus 111 ~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~-------------------------~~~~~~ 165 (360)
T 3ab1_A 111 RTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE-------------------------DFKGKR 165 (360)
T ss_dssp EETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG-------------------------GGTTCE
T ss_pred EECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH-------------------------HcCCCc
Confidence 3345568999999999999 567777888 53321 1111111 012359
Q ss_pred EEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEE
Q 018671 86 CVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVD 163 (352)
Q Consensus 86 vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~ 163 (352)
|+|||+|++|+|+|..|++.+ .+|+++++. .+++. +...+.+.+.+++.||+++.+ +|++++
T Consensus 166 vvVvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~i~ 229 (360)
T 3ab1_A 166 VVIVGGGDSALDWTVGLIKNA--------------ASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVASIE 229 (360)
T ss_dssp EEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEEEE
T ss_pred EEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHHhc
Confidence 999999999999999998765 899999987 44432 356677788888999999999 899987
Q ss_pred CC-----eEEEc--CC--cEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCC
Q 018671 164 SQ-----KLILN--DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG 233 (352)
Q Consensus 164 ~~-----~v~~~--~g--~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~ 233 (352)
.+ .|.+. +| +++++|.||+|+|++|+ ++++.++++.+ +|++.||+++|+ +.|+|||+|||+..+.
T Consensus 230 ~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~--- 304 (360)
T 3ab1_A 230 ESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSHMKT-SVDGLYAAGDIAYYPG--- 304 (360)
T ss_dssp EETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE-TTEEECCTTSBC-SSTTEEECSTTEECTT---
T ss_pred cCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc-cCeeeecCCCcC-CCCCEEEecCccCCCC---
Confidence 54 56774 77 57999999999999998 48888888876 689999999998 8999999999997532
Q ss_pred CcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 234 KTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 234 ~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.++++..|..||+++|+||...+.
T Consensus 305 ---~~~~~~~A~~~g~~aa~~i~~~l~ 328 (360)
T 3ab1_A 305 ---KLKIIQTGLSEATMAVRHSLSYIK 328 (360)
T ss_dssp ---CCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred ---ccceeehhHHHHHHHHHHHHhhcC
Confidence 278899999999999999988765
No 72
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1.1e-25 Score=208.91 Aligned_cols=197 Identities=21% Similarity=0.218 Sum_probs=148.6
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCccccC-cCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
+.++.++.||+||+|||+.|..|++||..++. ..+.+.... ... ....++|+|||+|++
T Consensus 107 ~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~---~~~-----------------~~~~~~v~ViG~G~~ 166 (335)
T 2a87_A 107 TADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATC---DGF-----------------FFRDQDIAVIGGGDS 166 (335)
T ss_dssp ETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHH---HGG-----------------GGTTCEEEEECSSHH
T ss_pred eCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeecc---chh-----------------hcCCCEEEEECCCHH
Confidence 34566899999999999999999999874421 011111111 100 012369999999999
Q ss_pred HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe----EE
Q 018671 95 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK----LI 168 (352)
Q Consensus 95 g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~----v~ 168 (352)
|+|+|..|++++ .+|+++++. .++. .+.+ ..+.+++.||+++++ +|++++.+. +.
T Consensus 167 g~e~a~~l~~~g--------------~~V~l~~~~~~~~~--~~~~---~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~ 227 (335)
T 2a87_A 167 AMEEATFLTRFA--------------RSVTLVHRRDEFRA--SKIM---LDRARNNDKIRFLTNHTVVAVDGDTTVTGLR 227 (335)
T ss_dssp HHHHHHHHTTTC--------------SEEEEECSSSSCSS--CTTH---HHHHHHCTTEEEECSEEEEEEECSSSCCEEE
T ss_pred HHHHHHHHHHhC--------------CeEEEEEcCCcCCc--cHHH---HHHHhccCCcEEEeCceeEEEecCCcEeEEE
Confidence 999999998776 899999987 4432 2222 124456789999999 899998764 77
Q ss_pred Ec---CC--cEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchH
Q 018671 169 LN---DG--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 242 (352)
Q Consensus 169 ~~---~g--~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~ 242 (352)
++ +| +++++|.||+|+|.+|+. ++. .+++.+++|++.||++++.++.|+|||+|||+.. .++.+.
T Consensus 228 ~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~--------~~~~~~ 298 (335)
T 2a87_A 228 VRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDR--------TYRQAV 298 (335)
T ss_dssp EEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCC--------SCCCHH
T ss_pred EEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCc--------cHHHHH
Confidence 75 45 579999999999999995 554 5677788899999996533499999999999962 257899
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018671 243 VAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 243 ~A~~qg~~~a~~i~~~~~ 260 (352)
.|..||+.+|.||.+.+.
T Consensus 299 ~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 299 TAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHhh
Confidence 999999999999998876
No 73
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.93 E-value=6.6e-26 Score=208.18 Aligned_cols=200 Identities=18% Similarity=0.208 Sum_probs=145.1
Q ss_pred cccCCCeeEeeCCEEEEcCCCCCCCCCCCCccccC-cCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECC
Q 018671 13 RTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 91 (352)
Q Consensus 13 ~~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGg 91 (352)
...+.++.++.||+||||||+.|+.|++||.+... ............ ....+.++++||||
T Consensus 99 ~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~------------------~~~~~~~~vvViGg 160 (314)
T 4a5l_A 99 KLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGA------------------VPIFRNKVLMVVGG 160 (314)
T ss_dssp EEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTT------------------SGGGTTSEEEEECS
T ss_pred EEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhh------------------hhhcCCCeEEEECC
Confidence 34566778999999999999999999999975321 122222211110 01123469999999
Q ss_pred ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----
Q 018671 92 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---- 165 (352)
Q Consensus 92 G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~---- 165 (352)
|++|+|+|..|++++ .+|+++++. .... .+. ...+.+...+++.+.. .+.++...
T Consensus 161 G~ig~e~A~~l~~~G--------------~~Vt~v~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 221 (314)
T 4a5l_A 161 GDAAMEEALHLTKYG--------------SKVIILHRRDAFRA--SKT---MQERVLNHPKIEVIWNSELVELEGDGDLL 221 (314)
T ss_dssp SHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS--CHH---HHHHHHTCTTEEEECSEEEEEEEESSSSE
T ss_pred ChHHHHHHHHHHHhC--------------Ceeeeecccccccc--cch---hhhhhhcccceeeEeeeeeEEEEeeeecc
Confidence 999999999999887 899999986 3332 222 2334455667777766 56665432
Q ss_pred -eEEE-----cCCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCC
Q 018671 166 -KLIL-----NDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 238 (352)
Q Consensus 166 -~v~~-----~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~ 238 (352)
.+.+ .+++++++|.+++++|.+|+. ++ ...+..+++|.+ ||+++|| +.|+|||+|||+.. ..
T Consensus 222 ~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l-~~~~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~--------~~ 290 (314)
T 4a5l_A 222 NGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFL-GGQVKTADDGYI-LTEGPKT-SVDGVFACGDVCDR--------VY 290 (314)
T ss_dssp EEEEEEETTTCCEEEEECSEEEECSCEEESCGGG-TTSSCBCTTSCB-CCBTTBC-SSTTEEECSTTTCS--------SC
T ss_pred ceeEEeecccccceeeccccceEecccccChhHh-cccceEcCCeeE-eCCCCcc-CCCCEEEEEeccCC--------cc
Confidence 2333 245689999999999999995 44 345667777866 8889998 99999999999962 14
Q ss_pred CchHHHHHHHHHHHHHHHHHhh
Q 018671 239 ALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 239 ~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+++..|+.||+.||.++.+.++
T Consensus 291 ~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 291 RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 5788999999999999988775
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=2e-25 Score=208.02 Aligned_cols=198 Identities=22% Similarity=0.280 Sum_probs=145.0
Q ss_pred cCCCeeEeeCCEEEEcCC--CCCCCCCCCCccccC---cCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEE
Q 018671 15 LEPWKFKISYDKLVIALG--AEASTFGIHGVKENA---TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVV 89 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtG--s~~~~~~ipG~~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVv 89 (352)
+..++.++.||+||+||| +.|+.|.+||..+.. +......+ ......++|+||
T Consensus 112 v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~v~Vv 169 (357)
T 4a9w_A 112 VARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYST----------------------PAPFAGMRVAII 169 (357)
T ss_dssp EETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCC----------------------SGGGTTSEEEEE
T ss_pred EEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCC----------------------hhhcCCCEEEEE
Confidence 444445899999999999 467888999975421 11100000 011234699999
Q ss_pred CCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC--CCCCCC--cHHHHHHHHHHHH-----------------
Q 018671 90 GGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN--EILSSF--DDRLRHYATTQLS----------------- 148 (352)
Q Consensus 90 GgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~--~~l~~~--~~~~~~~~~~~l~----------------- 148 (352)
|+|++|+|+|.+|++.+ +|+++.+. .++|.. +..+.+.+.+.+.
T Consensus 170 G~G~~g~e~a~~l~~~~---------------~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (357)
T 4a9w_A 170 GGGNSGAQILAEVSTVA---------------ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGD 234 (357)
T ss_dssp CCSHHHHHHHHHHTTTS---------------EEEEECSSCCCBCCTTCCTHHHHTC----------------------C
T ss_pred CCCcCHHHHHHHHHhhC---------------CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccC
Confidence 99999999999998753 59999875 344432 3344333333332
Q ss_pred -----------hCCCEEEeC-ceEEEECCeEEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCCc--ccc
Q 018671 149 -----------KSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEW--LRV 213 (352)
Q Consensus 149 -----------~~gV~v~~~-~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~~--l~~ 213 (352)
+.|+ +... .+++++.+.+.+++|+++++|+||||+|++|+ +++++++++ +++|++.||++ +++
T Consensus 235 ~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~-~~~G~i~vd~~~l~~t 312 (357)
T 4a9w_A 235 IVMVPPVLDARARGV-LAAVPPPARFSPTGMQWADGTERAFDAVIWCTGFRPALSHLKGLDLV-TPQGQVEVDGSGLRAL 312 (357)
T ss_dssp BCCCHHHHHHHHTTC-CCEECCCSEEETTEEECTTSCEEECSEEEECCCBCCCCGGGTTTTCB-CTTSCBCBCTTSCBBS
T ss_pred cccChhHHHHHhcCc-eEEecCcceEeCCeeEECCCCEecCCEEEECCCcCCCCcccCccccc-CCCCCccccCCcccCC
Confidence 4455 4444 68889999999999999999999999999999 788888988 78899999998 565
Q ss_pred CCCCCEEEEccc--cccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 214 PSVQDVFAVGDC--SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 214 ~~~~~IfaiGD~--a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+.|+|||+||| +. +.++++..|.+||+.+|+||.+.++
T Consensus 313 -~~~~vya~Gd~d~~~--------~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 313 -AVPSVWLLGYGDWNG--------MASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp -SCTTEEECSSCGGGS--------TTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred -CCCCeEEeccccccc--------cchhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999954 43 2367778899999999999998875
No 75
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.93 E-value=1.6e-25 Score=210.23 Aligned_cols=202 Identities=13% Similarity=0.113 Sum_probs=148.1
Q ss_pred ccCCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCCh
Q 018671 14 TLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGP 93 (352)
Q Consensus 14 ~~~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~ 93 (352)
.+..++.++.||+||+|||+.+. |.+|+ +..++...+.+ . .....++|+|||+|+
T Consensus 122 ~v~~~~g~~~~d~vVlAtG~~~~-p~ip~--~~~~~~~~~~~---------------------~-~~~~~~~vvVvG~G~ 176 (369)
T 3d1c_A 122 TIATTTETYHADYIFVATGDYNF-PKKPF--KYGIHYSEIED---------------------F-DNFNKGQYVVIGGNE 176 (369)
T ss_dssp EEEESSCCEEEEEEEECCCSTTS-BCCCS--SSCEEGGGCSC---------------------G-GGSCSSEEEEECCSH
T ss_pred EEEeCCCEEEeCEEEECCCCCCc-cCCCC--CceechhhcCC---------------------h-hhcCCCEEEEECCCc
Confidence 33333347999999999999865 56776 22222111100 0 011236999999999
Q ss_pred HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-------CCcHHHHHHHHHHHHhCC-CEEEeC-ceEEE-
Q 018671 94 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-------SFDDRLRHYATTQLSKSG-VRLVRG-IVKDV- 162 (352)
Q Consensus 94 ~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-------~~~~~~~~~~~~~l~~~g-V~v~~~-~V~~v- 162 (352)
+|+|+|..|++.+ .+|+++++. .+++ .+++...+.+.+.|++.| |+++++ +|+++
T Consensus 177 ~g~e~a~~l~~~g--------------~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~ 242 (369)
T 3d1c_A 177 SGFDAAYQLAKNG--------------SDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDID 242 (369)
T ss_dssp HHHHHHHHHHHTT--------------CEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEE
T ss_pred CHHHHHHHHHhcC--------------CeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEE
Confidence 9999999999876 899999987 5553 256788889999999997 999999 89999
Q ss_pred -ECC--eEEEcCCcEEe-cceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCC
Q 018671 163 -DSQ--KLILNDGTEVP-YGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 237 (352)
Q Consensus 163 -~~~--~v~~~~g~~i~-~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~ 237 (352)
+++ .+.+.+|+++. +|.+|||+|++|+. ++.+.+++ +++|++.||++++.+++|+|||+|||+..+.. .
T Consensus 243 ~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~----~- 316 (369)
T 3d1c_A 243 FNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFV-TTNQDIKLTTHDESTRYPNIFMIGATVENDNA----K- 316 (369)
T ss_dssp EETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSC-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSC----C-
T ss_pred ecCCceEEEecCCeEeccCCceEEeeccCCccchhhhhhcc-CCCCCEEechhhcccCCCCeEEeccccccCCe----e-
Confidence 455 46788887775 69999999999996 66665566 67899999987555599999999999975431 1
Q ss_pred CCchHHHHHHHHHHHHHHHHHhh
Q 018671 238 PALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 238 ~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
......|.+||+++|++|.....
T Consensus 317 ~~~~~~~~~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 317 LCYIYKFRARFAVLAHLLTQREG 339 (369)
T ss_dssp CCSHHHHGGGHHHHHHHHHHHTT
T ss_pred EEEEehhhHHHHHHHHHHhcccC
Confidence 22345688999999999987653
No 76
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.91 E-value=5.1e-24 Score=209.38 Aligned_cols=196 Identities=23% Similarity=0.283 Sum_probs=150.8
Q ss_pred CCCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHH
Q 018671 16 EPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTG 95 (352)
Q Consensus 16 ~~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 95 (352)
+.++.++.||+||+|||+.|+.+++||..++. .+.+..... .+ ......++|+|||||++|
T Consensus 307 ~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~--~~~v~~~~~----------------~~-~~~~~~k~V~ViGgG~~g 367 (521)
T 1hyu_A 307 TASGAVLKARSIIIATGAKWRNMNVPGEDQYR--TKGVTYCPH----------------CD-GPLFKGKRVAVIGGGNSG 367 (521)
T ss_dssp ETTSCEEEEEEEEECCCEEECCCCCTTTTTTT--TTTEECCTT----------------CC-GGGGBTSEEEEECCSHHH
T ss_pred ECCCCEEEcCEEEECCCCCcCCCCCCChhhhc--CceEEEeec----------------Cc-hhhcCCCeEEEECCCHHH
Confidence 34566899999999999999999999975421 011000000 00 011234699999999999
Q ss_pred HHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHh-CCCEEEeC-ceEEEECC-----eE
Q 018671 96 VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSK-SGVRLVRG-IVKDVDSQ-----KL 167 (352)
Q Consensus 96 ~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~-~gV~v~~~-~V~~v~~~-----~v 167 (352)
+|+|..|+..+ .+|+++++. .+++ + +.+.+.|++ .||+++++ ++++++++ .+
T Consensus 368 ~E~A~~L~~~g--------------~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v 427 (521)
T 1hyu_A 368 VEAAIDLAGIV--------------EHVTLLEFAPEMKA--D----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGL 427 (521)
T ss_dssp HHHHHHHHHHB--------------SEEEEECSSSSCCS--C----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEE
T ss_pred HHHHHHHHhhC--------------CEEEEEEeCcccCc--C----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEE
Confidence 99999999876 899999987 4443 2 345667777 69999999 89999764 45
Q ss_pred EEcC---Cc--EEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCch
Q 018671 168 ILND---GT--EVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 241 (352)
Q Consensus 168 ~~~~---g~--~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~ 241 (352)
.+.+ |+ ++++|.|++++|.+|+. ++.. .++++++|+|.||+++|+ +.|+|||+|||+.. .++++
T Consensus 428 ~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~--------~~~~~ 497 (521)
T 1hyu_A 428 EYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCET-SVKGVFAAGDCTTV--------PYKQI 497 (521)
T ss_dssp EEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTCBC-SSTTEEECSTTBCC--------SSCCH
T ss_pred EEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCCCC-CCCCEEEeecccCC--------Cccee
Confidence 6653 53 68999999999999984 6665 477788899999999998 99999999999963 14688
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 018671 242 QVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 242 ~~A~~qg~~~a~~i~~~~~ 260 (352)
..|+.||..+|.+|...+.
T Consensus 498 ~~A~~~g~~aa~~i~~~L~ 516 (521)
T 1hyu_A 498 IIATGEGAKASLSAFDYLI 516 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eehHHhHHHHHHHHHHHHH
Confidence 9999999999999988775
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.91 E-value=4.9e-24 Score=205.82 Aligned_cols=207 Identities=17% Similarity=0.171 Sum_probs=146.5
Q ss_pred eEeeCCEEEEcCCCC-CCCCCCCCccccCcCCCCHHHHHHHHHHHHH-HHhhccCCCCCH-HHhccCCcEEEECCChHHH
Q 018671 20 FKISYDKLVIALGAE-ASTFGIHGVKENATFLREVHHAQEIRRKLLL-NLMLSDVPGISE-EEKSRLLHCVVVGGGPTGV 96 (352)
Q Consensus 20 ~~i~yD~LViAtGs~-~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~vvVvGgG~~g~ 96 (352)
..+.||+||||||+. |+.+++||.... .+.++..+...... .+... .+..+. .....+++|+|||||++|+
T Consensus 204 ~~~~~d~vvlAtG~~~~~~~~ipG~~~~-----gv~~a~~~l~~~~~~~~~~~-~~~~~~g~~~~~gk~VvVIGgG~~a~ 277 (456)
T 2vdc_G 204 LRRKHVAVLVATGVYKARDIKAPGSGLG-----NIVAALDYLTTSNKVSLGDT-VEAYENGSLNAAGKHVVVLGGGDTAM 277 (456)
T ss_dssp HHSSCSEEEECCCCCEECCTTCSCCTTT-----TEEEHHHHHHHHHHHHCTTT-CSSCCTTCSCCCCSEEEEECSSHHHH
T ss_pred hHhhCCEEEEecCCCCCCCCCCCCCcCC-----CcEEHHHHHHHhhhhhcccc-cccccccccccCCCEEEEECCChhHH
Confidence 346899999999997 778889996321 11112222111100 01100 000000 0113457999999999999
Q ss_pred HHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CC-CCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCe----EEE
Q 018671 97 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-LSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK----LIL 169 (352)
Q Consensus 97 e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~-l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~----v~~ 169 (352)
|+|..+.+.+. .+|+++++. .. +|..+.+ .+.+++.||+++.+ .++++.+++ |.+
T Consensus 278 d~A~~~~r~Ga-------------~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~ 339 (456)
T 2vdc_G 278 DCVRTAIRQGA-------------TSVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRA 339 (456)
T ss_dssp HHHHHHHHTTC-------------SEEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCSSSCCEEEEEEEETTEE
T ss_pred HHHHHHHHcCC-------------CEEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCCCceEEeCCCcEEEEEE
Confidence 99999887651 379999986 43 6665543 24577889999988 666664331 222
Q ss_pred c------------------CC--cEEecceEEEecCCCcch---hhhhcCCCCCCCCccccCCc-cccCCCCCEEEEccc
Q 018671 170 N------------------DG--TEVPYGLLVWSTGVGPST---LVKSLDLPKSPGGRIGIDEW-LRVPSVQDVFAVGDC 225 (352)
Q Consensus 170 ~------------------~g--~~i~~D~vi~a~G~~~~~---~~~~~~l~~~~~G~i~Vd~~-l~~~~~~~IfaiGD~ 225 (352)
. +| .++++|+||+|+|+.|++ ++..++++++++|+|.||++ +|+ +.|+|||+|||
T Consensus 340 ~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~T-s~~~VfA~GD~ 418 (456)
T 2vdc_G 340 VRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMT-NMDGVFAAGDI 418 (456)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBC-SSTTEEECGGG
T ss_pred EEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcC-CCCCEEEeccc
Confidence 1 23 469999999999999974 67888999999999999997 997 99999999999
Q ss_pred cccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 226 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 226 a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+.. ++++..|+.||+.+|++|...+.
T Consensus 419 ~~g---------~~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 419 VRG---------ASLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp GSS---------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC---------chHHHHHHHHHHHHHHHHHHHhh
Confidence 862 67899999999999999998876
No 78
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.91 E-value=2.5e-23 Score=175.93 Aligned_cols=150 Identities=25% Similarity=0.354 Sum_probs=128.4
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC---------CCC-----cHHHHHHHHHHHHh
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------SSF-----DDRLRHYATTQLSK 149 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l---------~~~-----~~~~~~~~~~~l~~ 149 (352)
+|+|||||++|+|+|..|++.+ .+|+++++. ..+ +.+ ++++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAG--------------LKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999999876 899999986 444 233 57889999999999
Q ss_pred CCCEEEeCceEEEECC----eEEEcCCcEEecceEEEecCCCcchhhhhcCCCCCCCCccccCCccccCCCCCEEEEccc
Q 018671 150 SGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDC 225 (352)
Q Consensus 150 ~gV~v~~~~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~ 225 (352)
.||+++.++|++++.+ .+.+++| ++++|.||+|+|..|+ +.+.++++.+ +|++.||+++|+ +.|+|||+|||
T Consensus 69 ~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~-~~~~~g~~~~-~g~i~vd~~~~t-~~~~i~a~GD~ 144 (180)
T 2ywl_A 69 YGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT-LPSLLGLTRR-GAYIDTDEGGRT-SYPRVYAAGVA 144 (180)
T ss_dssp TTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH-HHHHHTCCEE-TTEECCCTTCBC-SSTTEEECGGG
T ss_pred cCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC-ccccCCCCcc-CceEEeCCCCCc-CCCCEEEeecc
Confidence 9999998888888653 3666777 8999999999999985 5577788888 899999999998 99999999999
Q ss_pred cccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 226 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 226 a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+..+ +++++.|.+||+++|.||...++
T Consensus 145 ~~~~--------~~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 145 RGKV--------PGHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp GTCC--------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcc--------hhhHHHHHHhHHHHHHHHHHHhh
Confidence 9731 23789999999999999988765
No 79
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.90 E-value=1.6e-23 Score=203.04 Aligned_cols=176 Identities=11% Similarity=0.081 Sum_probs=135.8
Q ss_pred eEeeCCEEEEcCC--CCCCCCCCCCcccc---CcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChH
Q 018671 20 FKISYDKLVIALG--AEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 94 (352)
Q Consensus 20 ~~i~yD~LViAtG--s~~~~~~ipG~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~ 94 (352)
.++.||+||+||| +.|+.|.+||++++ .++.+.+.+. .....++|+|||+|++
T Consensus 151 ~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~----------------------~~~~~k~VvVVG~G~s 208 (464)
T 2xve_A 151 YSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDA----------------------LEFKDKTVLLVGSSYS 208 (464)
T ss_dssp EEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCG----------------------GGGTTSEEEEECCSTT
T ss_pred EEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCH----------------------hHcCCCEEEEEcCCCC
Confidence 5789999999999 88999999997542 1111111110 0123469999999999
Q ss_pred HHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEECCeEEEcCCc
Q 018671 95 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGT 173 (352)
Q Consensus 95 g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~ 173 (352)
|+|+|.+|++.+ .+|+++++. .+++..- ..||+++ ..|+++++++|+++||+
T Consensus 209 g~eiA~~l~~~g--------------~~V~li~~~~~~~~~~~------------~~~V~~~-~~V~~i~~~~V~~~dG~ 261 (464)
T 2xve_A 209 AEDIGSQCYKYG--------------AKKLISCYRTAPMGYKW------------PENWDER-PNLVRVDTENAYFADGS 261 (464)
T ss_dssp HHHHHHHHHHTT--------------CSEEEEECSSCCCCCCC------------CTTEEEC-SCEEEECSSEEEETTSC
T ss_pred HHHHHHHHHHhC--------------CeEEEEEECCCCCCCCC------------CCceEEc-CCeEEEeCCEEEECCCC
Confidence 999999999987 899999986 5554311 1478777 57899999999999999
Q ss_pred EEecceEEEecCCCcc-hhhhh-cCCCCCCCCccccCCc---cccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHH
Q 018671 174 EVPYGLLVWSTGVGPS-TLVKS-LDLPKSPGGRIGIDEW---LRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248 (352)
Q Consensus 174 ~i~~D~vi~a~G~~~~-~~~~~-~~l~~~~~G~i~Vd~~---l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg 248 (352)
++++|.||+|+|++|+ +++.. +++..+++|++ ++.+ +++ +.|+||++|||+. ...+..|..||
T Consensus 262 ~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~----------~~~~~~a~~qa 329 (464)
T 2xve_A 262 SEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQ----------WYSFNMFDAQA 329 (464)
T ss_dssp EEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCC----------SSCHHHHHHHH
T ss_pred EEeCCEEEECCCCCCCCCCcCcccccccCCCccc-ccccceEecC-CCCCEEEEeCccc----------ccchHHHHHHH
Confidence 9999999999999999 67665 67777665565 4433 344 8999999999885 34678999999
Q ss_pred HHHHHHHH
Q 018671 249 KYLFSLLN 256 (352)
Q Consensus 249 ~~~a~~i~ 256 (352)
+++|++|.
T Consensus 330 ~~~a~~l~ 337 (464)
T 2xve_A 330 WYARDVIM 337 (464)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999885
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.88 E-value=7.8e-23 Score=197.54 Aligned_cols=220 Identities=14% Similarity=0.110 Sum_probs=145.2
Q ss_pred eEeeCCEEEEcCCCC-CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 20 FKISYDKLVIALGAE-ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 20 ~~i~yD~LViAtGs~-~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.++.||+||||||+. |+.+++||.+. ..+.+..+.....+...+ +. ...+ .-..++|+|||+|++|+|+
T Consensus 93 ~~~~~d~lViAtG~~~~~~~~ipG~~~--~gv~~~~~~~~~~~~~~d-~~-~~~~------~~~~~~vvVIG~G~~g~e~ 162 (456)
T 1lqt_A 93 LSERYDAVIYAVGAQSDRMLNIPGEDL--PGSIAAVDFVGWYNAHPH-FE-QVSP------DLSGARAVVIGNGNVALDV 162 (456)
T ss_dssp HHHHSSEEEECCCCCEECCCCCTTTTS--TTEEEHHHHHHHHTTCGG-GT-TCCC------CCCSSEEEEECCSHHHHHH
T ss_pred CeEeCCEEEEeeCCCCCCCCCCCCCCC--CCcEEHHHHHhhhhcCcc-cc-cchh------hcCCCEEEEECCCHHHHHH
Confidence 368999999999997 78889999731 112222222211110000 00 0000 0135699999999999999
Q ss_pred HHHHHHhHhhHHHhhc-----CCCC--CccEEEEEeCC-CCCCCCcH-------------------HH------------
Q 018671 99 SGELSDFIMRDVRQRY-----SHVK--DYIHVTLIEAN-EILSSFDD-------------------RL------------ 139 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~-----~~~~--~~~~V~lv~~~-~~l~~~~~-------------------~~------------ 139 (352)
|..|++........++ ..++ ...+|+++++. .+.+.+.+ ++
T Consensus 163 A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~ 242 (456)
T 1lqt_A 163 ARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVG 242 (456)
T ss_dssp HHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHC
T ss_pred HHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhcc
Confidence 9999875311000000 0000 12599999986 44333221 11
Q ss_pred ------HHHHHHHHHh------CCCEEEeC-ceEEEECC----eEEEc----------------CC--cEEecceEEEec
Q 018671 140 ------RHYATTQLSK------SGVRLVRG-IVKDVDSQ----KLILN----------------DG--TEVPYGLLVWST 184 (352)
Q Consensus 140 ------~~~~~~~l~~------~gV~v~~~-~V~~v~~~----~v~~~----------------~g--~~i~~D~vi~a~ 184 (352)
.+.+.+.+++ +||+++++ .+.++.++ .|.+. +| ++++||+||+++
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~ 322 (456)
T 1lqt_A 243 KVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSV 322 (456)
T ss_dssp HHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECS
T ss_pred HHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcc
Confidence 2334444555 78999999 79999765 36664 34 469999999999
Q ss_pred CCCcchhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 185 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 185 G~~~~~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
|++|+++ .+++.+++|++.||+++|+++.|+|||+|||+..+ ......|+.||..+|.+|...+.
T Consensus 323 G~~p~~l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp--------~~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 323 GYRGVPT---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGP--------TGVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp CEECCCC---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCS--------CSCTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCC---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCC--------chhHHHHHHHHHHHHHHHHHHHH
Confidence 9999984 46777888999999999966999999999999621 22355799999999999988765
No 81
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.88 E-value=1.7e-22 Score=195.44 Aligned_cols=219 Identities=15% Similarity=0.104 Sum_probs=142.1
Q ss_pred eEeeCCEEEEcCCCCC-CCCCCCCcc-ccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 20 FKISYDKLVIALGAEA-STFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~-~~~~ipG~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
.++.||+||||||+.+ +.|++||.+ +++++ ..+.....+... ...... . .-..++|+|||+|++|+|
T Consensus 91 ~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~---~~~~~~~~~~~~---d~~~~~---~--~~~~~~vvVIGgG~~g~e 159 (460)
T 1cjc_A 91 LQDAYHAVVLSYGAEDHQALDIPGEELPGVFS---ARAFVGWYNGLP---ENRELA---P--DLSCDTAVILGQGNVALD 159 (460)
T ss_dssp HHHHSSEEEECCCCCEECCCCCTTTTSTTEEE---HHHHHHHHTTCG---GGTTCC---C--CTTSSEEEEESCSHHHHH
T ss_pred ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEE---HHHHHHHhhcCc---cccccc---c--CCCCCEEEEECCCHHHHH
Confidence 4578999999999995 778999973 22222 222211111000 000000 0 013469999999999999
Q ss_pred HHHHHHHhHhhHHHhhc-----CCC-CCcc-EEEEEeCC-CC--------------CCCC-------------------c
Q 018671 98 FSGELSDFIMRDVRQRY-----SHV-KDYI-HVTLIEAN-EI--------------LSSF-------------------D 136 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~-----~~~-~~~~-~V~lv~~~-~~--------------l~~~-------------------~ 136 (352)
+|..|++........+. ..+ .... +|+++++. .+ +|.. +
T Consensus 160 ~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~ 239 (460)
T 1cjc_A 160 VARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAA 239 (460)
T ss_dssp HHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSC
T ss_pred HHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhcc
Confidence 99999842110000000 000 1123 89999886 33 2211 1
Q ss_pred HH---HHHHHHHHHHh--------------CCCEEEeC-ceEEEECC-------eEEEc---------------CC--cE
Q 018671 137 DR---LRHYATTQLSK--------------SGVRLVRG-IVKDVDSQ-------KLILN---------------DG--TE 174 (352)
Q Consensus 137 ~~---~~~~~~~~l~~--------------~gV~v~~~-~V~~v~~~-------~v~~~---------------~g--~~ 174 (352)
.. +.+.+.+.+++ +||+++++ .+.+|.++ .|.+. +| ++
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~ 319 (460)
T 1cjc_A 240 RPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVED 319 (460)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEE
Confidence 10 22333444445 88999999 78888643 25543 34 57
Q ss_pred EecceEEEecCCCcchhhhhcCC-CCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHH
Q 018671 175 VPYGLLVWSTGVGPSTLVKSLDL-PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 253 (352)
Q Consensus 175 i~~D~vi~a~G~~~~~~~~~~~l-~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~ 253 (352)
+++|+||+++|++|+++ .++ +.+++|.+.||+++|+.+.|+|||+|||+.. ....+..|+.||+.+|.
T Consensus 320 i~~d~Vi~a~G~~p~~l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g--------~~~~i~~a~~~g~~aa~ 388 (460)
T 1cjc_A 320 LPCGLVLSSIGYKSRPI---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRG--------PTGVITTTMTDSFLTGQ 388 (460)
T ss_dssp EECSEEEECCCEECCCC---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHC--------TTCCHHHHHHHHHHHHH
T ss_pred EEcCEEEECCCCCCCCC---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcC--------CCccHHHHHHHHHHHHH
Confidence 99999999999999974 567 7788889999999999448999999999952 12346689999999999
Q ss_pred HHHHHhh
Q 018671 254 LLNRIGK 260 (352)
Q Consensus 254 ~i~~~~~ 260 (352)
||...+.
T Consensus 389 ~i~~~l~ 395 (460)
T 1cjc_A 389 ILLQDLK 395 (460)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998775
No 82
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.87 E-value=1.5e-22 Score=206.27 Aligned_cols=189 Identities=17% Similarity=0.209 Sum_probs=142.0
Q ss_pred CeeEeeCCEEEEcCCCC--------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEE
Q 018671 18 WKFKISYDKLVIALGAE--------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVV 89 (352)
Q Consensus 18 ~~~~i~yD~LViAtGs~--------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVv 89 (352)
++.++.||+||||||+. |+.+++||.+++...+.+..++.. .. ....++|+||
T Consensus 474 ~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~----------~~---------~~~gk~VvVI 534 (729)
T 1o94_A 474 DVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD----------GK---------KKIGKRVVIL 534 (729)
T ss_dssp HHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH----------CC---------SCCCSEEEEE
T ss_pred hccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc----------CC---------CCCCCeEEEE
Confidence 34568999999999998 566789997532222233333311 11 1234699999
Q ss_pred C--CChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC--CcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC
Q 018671 90 G--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS--FDDRLRHYATTQLSKSGVRLVRG-IVKDVDS 164 (352)
Q Consensus 90 G--gG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~--~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~ 164 (352)
| ||++|+|+|..|++++ .+|+++++.++++. ++.. ...+.+.|++.||+++++ +|+++++
T Consensus 535 G~GgG~~g~e~A~~l~~~G--------------~~Vtlv~~~~l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~ 599 (729)
T 1o94_A 535 NADTYFMAPSLAEKLATAG--------------HEVTIVSGVHLANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP 599 (729)
T ss_dssp ECCCSSHHHHHHHHHHHTT--------------CEEEEEESSCTTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET
T ss_pred cCCCCchHHHHHHHHHHcC--------------CEEEEEeccccccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC
Confidence 9 9999999999999887 89999998763331 2222 466778899999999999 8999998
Q ss_pred CeEEEc----CC-cE------------------EecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEE
Q 018671 165 QKLILN----DG-TE------------------VPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVF 220 (352)
Q Consensus 165 ~~v~~~----~g-~~------------------i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~If 220 (352)
+.+.+. ++ ++ +++|.||+|+|.+|+. +..+++ ..+|+++|+ +.|+||
T Consensus 600 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~--------~~vd~~~~t-~~~~Vy 670 (729)
T 1o94_A 600 GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELK--------ARESEWAEN-DIKGIY 670 (729)
T ss_dssp TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHH--------HTGGGTGGG-TCCEEE
T ss_pred CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHh--------hhccccccc-CCCCeE
Confidence 876542 33 33 9999999999999994 555432 136889998 899999
Q ss_pred EEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHh
Q 018671 221 AVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 221 aiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~ 259 (352)
|+|||+. +.++..|++||+.+|.+|...+
T Consensus 671 AiGD~~~----------~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 671 LIGDAEA----------PRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp ECGGGTS----------CCCHHHHHHHHHHHHHTTTSSC
T ss_pred EEeCccc----------hhhHHHHHHHHHHHHHHhhhhc
Confidence 9999985 5678899999999999996543
No 83
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.86 E-value=3.2e-21 Score=202.95 Aligned_cols=209 Identities=13% Similarity=0.085 Sum_probs=145.0
Q ss_pred eeEeeCCEEEEcCCC-CCCCCCC-CCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHH
Q 018671 19 KFKISYDKLVIALGA-EASTFGI-HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 96 (352)
Q Consensus 19 ~~~i~yD~LViAtGs-~~~~~~i-pG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~ 96 (352)
+.++.||+||||||+ .|+.+++ ||+.+. -.+.+..+..+..+. ........ .+.......++|+|||||++|+
T Consensus 271 ~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~-~gv~~a~~~L~~~~~---~~~~~~~~-~~~~~~~~~~~VvVIGgG~~g~ 345 (1025)
T 1gte_A 271 LKEEGYKAAFIGIGLPEPKTDDIFQGLTQD-QGFYTSKDFLPLVAK---SSKAGMCA-CHSPLPSIRGAVIVLGAGDTAF 345 (1025)
T ss_dssp HHHTTCCEEEECCCCCEECCCGGGTTCCTT-TTEEEHHHHHHHHHH---HHCBTTBS-CCCCCCCCCSEEEEECSSHHHH
T ss_pred cCccCCCEEEEecCCCCCCCCCCCCCCCCC-CCEEEhHHHHHHHHh---hccccccc-ccccccccCCcEEEECCChHHH
Confidence 345789999999999 4877654 465321 111222232221111 00000000 0000001234999999999999
Q ss_pred HHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC--CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce---EE
Q 018671 97 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN--EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LI 168 (352)
Q Consensus 97 e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~--~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~ 168 (352)
|+|..+.+++. .+|+++++. ..++.+++++ +.+++.||+++.+ .++++.. +. |.
T Consensus 346 e~A~~~~~~G~-------------~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~ 407 (1025)
T 1gte_A 346 DCATSALRCGA-------------RRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQ 407 (1025)
T ss_dssp HHHHHHHHTTC-------------SEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHcCC-------------CEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCceEEEccCCeEEEEE
Confidence 99999988761 389999986 3667776654 4577889999988 7777753 33 33
Q ss_pred Ec------CC---------cEEecceEEEecCCCcc-h-hhhh-cCCCCCCCCccccCC-ccccCCCCCEEEEccccccc
Q 018671 169 LN------DG---------TEVPYGLLVWSTGVGPS-T-LVKS-LDLPKSPGGRIGIDE-WLRVPSVQDVFAVGDCSGYL 229 (352)
Q Consensus 169 ~~------~g---------~~i~~D~vi~a~G~~~~-~-~~~~-~~l~~~~~G~i~Vd~-~l~~~~~~~IfaiGD~a~~~ 229 (352)
+. +| .++++|+||+++|.+|+ + +..+ .+++++++|+|.||+ ++|+ +.|+|||+|||+..
T Consensus 408 ~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~- 485 (1025)
T 1gte_A 408 FVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQT-SEPWVFAGGDIVGM- 485 (1025)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBC-SSTTEEECSGGGCS-
T ss_pred EEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCcc-CCCCEEEeCCCCCC-
Confidence 32 22 36899999999999864 3 6665 488888899999997 8998 99999999999952
Q ss_pred cCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 230 ESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 230 ~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+.++..|+.||+.+|++|...+.
T Consensus 486 --------~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 486 --------ANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------chHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999998765
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.86 E-value=1.6e-21 Score=188.86 Aligned_cols=203 Identities=15% Similarity=0.143 Sum_probs=134.8
Q ss_pred EeeCCEEEEcCCCCCCCCC-CCCccc--cCcCCCCHHH-HHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHH
Q 018671 21 KISYDKLVIALGAEASTFG-IHGVKE--NATFLREVHH-AQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 96 (352)
Q Consensus 21 ~i~yD~LViAtGs~~~~~~-ipG~~~--~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~ 96 (352)
++.||+||||||+.|..|+ +++... ..+......+ ...+. ....+.++|+|||||.+|+
T Consensus 178 ~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~vvVvGgG~sg~ 240 (463)
T 3s5w_A 178 VRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQP-----------------CSSGKPMKIAIIGGGQSAA 240 (463)
T ss_dssp EEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC------------------------CEEEEEECCSHHHH
T ss_pred EEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhh-----------------hcccCCCeEEEECCCHhHH
Confidence 8999999999999887665 233221 1222211111 11110 0011346999999999999
Q ss_pred HHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC--------------------CcHHHHHHHHHHHHh------
Q 018671 97 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS--------------------FDDRLRHYATTQLSK------ 149 (352)
Q Consensus 97 e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~--------------------~~~~~~~~~~~~l~~------ 149 (352)
|+|.+|++.. +..+|+++++. .++|. +++.....+.+.+..
T Consensus 241 e~a~~l~~~~------------~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 308 (463)
T 3s5w_A 241 EAFIDLNDSY------------PSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVV 308 (463)
T ss_dssp HHHHHHHHHC------------TTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCB
T ss_pred HHHHHHHhcC------------CCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcC
Confidence 9999999872 12899999987 55542 222333333333222
Q ss_pred --------------------CCCEEEeC-ceEEEECC--e--EEEc---CCc--EEecceEEEecCCCcc---hhhhhcC
Q 018671 150 --------------------SGVRLVRG-IVKDVDSQ--K--LILN---DGT--EVPYGLLVWSTGVGPS---TLVKSLD 196 (352)
Q Consensus 150 --------------------~gV~v~~~-~V~~v~~~--~--v~~~---~g~--~i~~D~vi~a~G~~~~---~~~~~~~ 196 (352)
.||+++.+ +|++++.+ . +.+. +|+ ++++|.||+|+|++|+ +++..+.
T Consensus 309 ~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~ 388 (463)
T 3s5w_A 309 DTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLA 388 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGG
T ss_pred CHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHH
Confidence 69999999 78888653 2 5565 675 4999999999999998 3555554
Q ss_pred CCCCCCCccccCCccccCC----CCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHh
Q 018671 197 LPKSPGGRIGIDEWLRVPS----VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 197 l~~~~~G~i~Vd~~l~~~~----~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~ 259 (352)
... |++.||+++++.. .++|||+|||...... ..|.....|.+++++++.++.+..
T Consensus 389 ~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~----~~~~l~~~a~r~~~i~~~~~~~~~ 448 (463)
T 3s5w_A 389 EYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGL----SDTLLSVLPVRAEEISGSLYQHLK 448 (463)
T ss_dssp GGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCT----TTTSSTTHHHHHHHHHHHHHHHHC
T ss_pred HHh---CCcccCcccccccCCCCCCeEEEcCCCcccCCc----CccchhHHHHHHHHHHHHHHhhcC
Confidence 332 8899999999754 4569999999865432 346788899999999988776653
No 85
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.85 E-value=7.7e-22 Score=190.39 Aligned_cols=176 Identities=15% Similarity=0.129 Sum_probs=129.3
Q ss_pred EeeCCEEEEcCCC--CCCCCCCCCcccc-------CcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECC
Q 018671 21 KISYDKLVIALGA--EASTFGIHGVKEN-------ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 91 (352)
Q Consensus 21 ~i~yD~LViAtGs--~~~~~~ipG~~~~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGg 91 (352)
++.||+||+|||+ .|+.|.+||++++ .++.+.+.+. + ....++|+|||+
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~---------------------~-~~~~k~VvVvG~ 220 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREP---------------------E-LFVGESVLVVGG 220 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCG---------------------G-GGTTCCEEEECS
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCCh---------------------h-hcCCCEEEEEcc
Confidence 7999999999998 7888999997532 1111111110 1 113469999999
Q ss_pred ChHHHHHHHHHHHhHhhHHHhhcCCCCCccE-EEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE--CCeEE
Q 018671 92 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD--SQKLI 168 (352)
Q Consensus 92 G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~--~~~v~ 168 (352)
|++|+|+|.+|++.+ .+ |+++++...+ +++.||++ ...|++++ +..|+
T Consensus 221 G~sg~e~A~~l~~~~--------------~~~V~l~~r~~~~--------------l~~~~i~~-~~~v~~~~~~~~~v~ 271 (447)
T 2gv8_A 221 ASSANDLVRHLTPVA--------------KHPIYQSLLGGGD--------------IQNESLQQ-VPEITKFDPTTREIY 271 (447)
T ss_dssp SHHHHHHHHHHTTTS--------------CSSEEEECTTCCS--------------CBCSSEEE-ECCEEEEETTTTEEE
T ss_pred CcCHHHHHHHHHHHh--------------CCcEEEEeCCCCc--------------CCCCCeEE-ecCeEEEecCCCEEE
Confidence 999999999999876 67 9999987322 34567763 23788885 45899
Q ss_pred EcCCcE-EecceEEEecCCCcc-hh-----hhhcCCCCCCCCccccCCcccc--CCCCCEEEEccccccccCCCCcCCCC
Q 018671 169 LNDGTE-VPYGLLVWSTGVGPS-TL-----VKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPA 239 (352)
Q Consensus 169 ~~~g~~-i~~D~vi~a~G~~~~-~~-----~~~~~l~~~~~G~i~Vd~~l~~--~~~~~IfaiGD~a~~~~~~~~~~~~~ 239 (352)
++||++ +++|.||+|+|++|+ ++ +..++..+..++.+.++.+.++ ++.|+||++|||.. ..
T Consensus 272 ~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~----------~~ 341 (447)
T 2gv8_A 272 LKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALH----------VV 341 (447)
T ss_dssp ETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBS----------SC
T ss_pred ECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEecccc----------cc
Confidence 999986 799999999999999 67 5544222223455666655553 48999999999985 23
Q ss_pred chHHHHHHHHHHHHHHHH
Q 018671 240 LAQVAERQGKYLFSLLNR 257 (352)
Q Consensus 240 ~~~~A~~qg~~~a~~i~~ 257 (352)
.++.|..||+++|++|..
T Consensus 342 ~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 342 PFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHHHcC
Confidence 688999999999999853
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.84 E-value=1.7e-21 Score=197.63 Aligned_cols=185 Identities=15% Similarity=0.075 Sum_probs=140.0
Q ss_pred eeEeeCCEEEEcCCCC--------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEEC
Q 018671 19 KFKISYDKLVIALGAE--------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVG 90 (352)
Q Consensus 19 ~~~i~yD~LViAtGs~--------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG 90 (352)
..++.||+||||||+. |..|++||.... .+.+..+.. .. .....++|+|||
T Consensus 472 ~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~--~v~~~~~~l----------~~---------~~~~g~~VvViG 530 (690)
T 3k30_A 472 IVEFGFEHVITATGATWRTDGVARFHTTALPIAEGM--QVLGPDDLF----------AG---------RLPDGKKVVVYD 530 (690)
T ss_dssp HHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTS--EEECHHHHH----------TT---------CCCSSSEEEEEE
T ss_pred HhhcCCCEEEEcCCCccccccccccCCCCCCCCCCC--cEEcHHHHh----------CC---------CCCCCCEEEEEc
Confidence 4568999999999998 446778886421 112222221 11 012346899999
Q ss_pred --CChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCc-HHHHHHHHHHHHhCCCEEEeC-ceEEEECC
Q 018671 91 --GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFD-DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ 165 (352)
Q Consensus 91 --gG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~-~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~ 165 (352)
+|.+|+|+|..|++.+ .+|+++++. .+++... +.....+.+.|++.||+++++ +|++++.+
T Consensus 531 ~ggG~~g~e~A~~L~~~g--------------~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~ 596 (690)
T 3k30_A 531 DDHYYLGGVVAELLAQKG--------------YEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAG 596 (690)
T ss_dssp CSCSSHHHHHHHHHHHTT--------------CEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETT
T ss_pred CCCCccHHHHHHHHHhCC--------------CeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECC
Confidence 9999999999999887 899999987 5555433 556778889999999999999 89999998
Q ss_pred eEEEc-----CCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCC
Q 018671 166 KLILN-----DGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 239 (352)
Q Consensus 166 ~v~~~-----~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~ 239 (352)
.+.+. +++++++|.||+|+|.+|+. +...++.. +. ++ +.|+||++|||+. ++
T Consensus 597 ~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~----~~-------~t-~~~~VyaiGD~~~----------~~ 654 (690)
T 3k30_A 597 GVTVRDTYASIERELECDAVVMVTARLPREELYLDLVAR----RD-------AG-EIASVRGIGDAWA----------PG 654 (690)
T ss_dssp EEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHH----HH-------HT-SCSEEEECGGGTS----------CB
T ss_pred eEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhh----hc-------cc-CCCCEEEEeCCCc----------hh
Confidence 76653 45689999999999999995 55543211 11 44 8899999999996 56
Q ss_pred chHHHHHHHHHHHHHHHHHhh
Q 018671 240 LAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 240 ~~~~A~~qg~~~a~~i~~~~~ 260 (352)
....|++||+.+|+||...+.
T Consensus 655 ~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 655 TIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp CHHHHHHHHHHHHHHTTCCCC
T ss_pred hHHHHHHHHHHHHHHHHhhcc
Confidence 778899999999999977643
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.84 E-value=2.6e-21 Score=202.38 Aligned_cols=184 Identities=18% Similarity=0.229 Sum_probs=139.3
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccc-cCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.++.||+||||||+.|+.+++||.+. .++. ..++ ...+. . ... ...++|+|||+|++|+|+
T Consensus 238 ~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~---~~~~---~~~l~-~--~~~---------~~gk~vvViGgG~~g~E~ 299 (965)
T 2gag_A 238 WHIRAKQVVLATGAHERPIVFENNDRPGIML---AGAV---RSYLN-R--YGV---------RAGARIAVATTNDSAYEL 299 (965)
T ss_dssp EEEEEEEEEECCCEEECCCCCBTCCSTTEEE---HHHH---HHHHH-T--TCE---------ESCSSEEEEESSTTHHHH
T ss_pred EEEECCEEEECCCCccCCCCCCCCCCCCEEE---hHHH---HHHHH-h--cCC---------CCCCeEEEEcCCHHHHHH
Confidence 47999999999999999999999743 2222 1222 22111 0 011 123699999999999999
Q ss_pred HHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--C----eEEEc
Q 018671 99 SGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q----KLILN 170 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~----~v~~~ 170 (352)
|..|++++ .+|+++++. .+++ . .+.+++.||+++++ .|++++. + .|++.
T Consensus 300 A~~L~~~G--------------~~Vtvv~~~~~~~~----~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~ 356 (965)
T 2gag_A 300 VRELAATG--------------GVVAVIDARSSISA----A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVA 356 (965)
T ss_dssp HHHHGGGT--------------CCSEEEESCSSCCH----H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHcC--------------CcEEEEECCCccch----h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEE
Confidence 99999887 779999987 4432 2 56788999999999 7999975 3 56776
Q ss_pred C-------C--cEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccc----cCCCCCEEEEccccccccCCCCcC
Q 018671 171 D-------G--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLR----VPSVQDVFAVGDCSGYLESTGKTV 236 (352)
Q Consensus 171 ~-------g--~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~----~~~~~~IfaiGD~a~~~~~~~~~~ 236 (352)
+ | +++++|.|++++|.+|+. ++... .|.+.+|++++ .++.|+|||+|||+..
T Consensus 357 ~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~-------- 422 (965)
T 2gag_A 357 ELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR------QGKLDWDTTIHAFVPADAVANQHLAGAMTGR-------- 422 (965)
T ss_dssp EECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT------TCCEEEETTTTEEEECSCCTTEEECGGGGTC--------
T ss_pred eccccCCCCceEEEEcCEEEECCCcCcChHHHHhC------CCcEEEcCcccccccCCCCCCEEEEEecCCc--------
Confidence 4 5 679999999999999995 55443 46799999887 2489999999999962
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhh
Q 018671 237 LPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 237 ~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+. ...|..||+.+|.+|...+.
T Consensus 423 -~~-l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 423 -LD-TASALSTGAATGAAAATAAG 444 (965)
T ss_dssp -CS-HHHHHHHHHHHHHHHHHHTT
T ss_pred -hh-HHHHHHHHHHHHHHHHHHcC
Confidence 33 34899999999999987654
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.82 E-value=4.3e-20 Score=181.84 Aligned_cols=202 Identities=14% Similarity=0.164 Sum_probs=140.9
Q ss_pred cCCCeeEeeCCEEEEcCC--CCCCCCCCCCccccCcC-CCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECC
Q 018671 15 LEPWKFKISYDKLVIALG--AEASTFGIHGVKENATF-LREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 91 (352)
Q Consensus 15 ~~~~~~~i~yD~LViAtG--s~~~~~~ipG~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGg 91 (352)
.+.++.++.||+||+||| +.|+.|++||++++.-. +++.. .........++|+|||+
T Consensus 127 ~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~--------------------~~~~~~~~~krV~VIG~ 186 (540)
T 3gwf_A 127 TTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAA--------------------WPEGKSLAGRRVGVIGT 186 (540)
T ss_dssp EETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEGGG--------------------CCSSCCCTTSEEEEECC
T ss_pred EEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEEeec--------------------CCCccccccceEEEECC
Confidence 344566799999999999 68999999998642110 10000 00001123469999999
Q ss_pred ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-C-CCCCC----cHHHHHHHH---------------------
Q 018671 92 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E-ILSSF----DDRLRHYAT--------------------- 144 (352)
Q Consensus 92 G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~-~l~~~----~~~~~~~~~--------------------- 144 (352)
|.+|+|+|.+|++.+ .+|+++++. . ++|.+ .+...+.+.
T Consensus 187 G~sgve~a~~l~~~~--------------~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~ 252 (540)
T 3gwf_A 187 GSTGQQVITSLAPEV--------------EHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEE 252 (540)
T ss_dssp SHHHHHHHHHHTTTC--------------SEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCC
T ss_pred CchHHHHHHHHHhhC--------------CEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccc
Confidence 999999999999876 899999987 4 34433 222222211
Q ss_pred ----------------------------------------------------H---------------------------
Q 018671 145 ----------------------------------------------------T--------------------------- 145 (352)
Q Consensus 145 ----------------------------------------------------~--------------------------- 145 (352)
+
T Consensus 253 ~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~ 332 (540)
T 3gwf_A 253 STLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLC 332 (540)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEE
T ss_pred cchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCC
Confidence 0
Q ss_pred ------HHHhCCCEEEe---CceEEEECCeEEEcCCcEEecceEEEecCCCcch-hhhhcCCCCCCCC---------ccc
Q 018671 146 ------QLSKSGVRLVR---GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGG---------RIG 206 (352)
Q Consensus 146 ------~l~~~gV~v~~---~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G---------~i~ 206 (352)
.|.+.+|+++. ..|++|++++|+++||+++++|+||+|||+.++. ++..+++. ..+| ...
T Consensus 333 ~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~ 411 (540)
T 3gwf_A 333 DSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIR-GRDGLHINDHWDGQPT 411 (540)
T ss_dssp ESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSSHHHHTSEEE-CGGGCBHHHHTSSSCC
T ss_pred CccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccccCcCcceEE-CCCCcCHHHhhccChh
Confidence 01144889884 4899999999999999999999999999999985 55544321 1112 233
Q ss_pred cCCccccCCCCCEEEE-ccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 207 IDEWLRVPSVQDVFAV-GDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 207 Vd~~l~~~~~~~Ifai-GD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
....+.++++||+|.+ |..+. .......+..|++++++.|....+
T Consensus 412 ~y~g~~v~gfPN~f~~~Gp~~~---------~~s~~~~~e~q~~~i~~~i~~~~~ 457 (540)
T 3gwf_A 412 SYLGVSTANFPNWFMVLGPNGP---------FTNLPPSIETQVEWISDTIGYAER 457 (540)
T ss_dssp CBTTTBCTTCTTEEESSCSSCB---------CSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccCCCCceEEEecCCCC---------CccHHHHHHHHHHHHHHHHHHHHH
Confidence 3344677899999999 77653 245567899999999999987765
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.81 E-value=7.6e-20 Score=184.96 Aligned_cols=188 Identities=18% Similarity=0.227 Sum_probs=138.6
Q ss_pred Ee-eCCEEEEcCCCCCCCCCCCCccc-cCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 21 KI-SYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 21 ~i-~yD~LViAtGs~~~~~~ipG~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.+ .||+||||||+.|+.|++||.++ +++ +..+. +... ....++|+|||||++|+|+
T Consensus 452 ~~~~~d~lviAtG~~p~~~~i~G~~~~~v~---~~~~~----------l~~~---------~~~~~~VvVIGgG~~g~E~ 509 (671)
T 1ps9_A 452 QLQAFDETILASGIVPRTPPIDGIDHPKVL---SYLDV----------LRDK---------APVGNKVAIIGCGGIGFDT 509 (671)
T ss_dssp SSCCSSEEEECCCEEECCCCCBTTTSTTEE---EHHHH----------HTSC---------CCCCSEEEEECCHHHHHHH
T ss_pred HhhcCCEEEEccCCCcCCCCCCCCCCCcEe---eHHHH----------hhCC---------CCCCCeEEEECCChhHHHH
Confidence 35 89999999999999999999754 222 22221 1111 1234699999999999999
Q ss_pred HHHHHHhHhhH------HHhh----------------cCCC-CCccEEEEEeCC-CCC-CCCcHHHHHHHHHHHHhCCCE
Q 018671 99 SGELSDFIMRD------VRQR----------------YSHV-KDYIHVTLIEAN-EIL-SSFDDRLRHYATTQLSKSGVR 153 (352)
Q Consensus 99 A~~l~~~~~~~------~~~~----------------~~~~-~~~~~V~lv~~~-~~l-~~~~~~~~~~~~~~l~~~gV~ 153 (352)
|..|++.+.+. +.+. ++.. ....+|+++++. ..+ ..+++.....+.+.|++.||+
T Consensus 510 A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~ 589 (671)
T 1ps9_A 510 AMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVK 589 (671)
T ss_dssp HHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCE
T ss_pred HHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCE
Confidence 99998765321 1111 1111 134789999885 433 456777788888999999999
Q ss_pred EEeC-ceEEEECCeEEE-cCC--cEEecceEEEecCCCcch-hhhhcCCCCCCCCccccCCccccCCCCCEEEEcccccc
Q 018671 154 LVRG-IVKDVDSQKLIL-NDG--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 228 (352)
Q Consensus 154 v~~~-~V~~v~~~~v~~-~~g--~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~ 228 (352)
++++ +|++++++++.+ .+| +++++|.||||+|.+|+. ++..+ +. ..++||++|||+..
T Consensus 590 v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l----------------~~-~g~~v~aiGD~~~~ 652 (671)
T 1ps9_A 590 MIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPL----------------ID-SGKTVHLIGGCDVA 652 (671)
T ss_dssp EECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEECCTTHHHH----------------HT-TTCCEEECGGGTCC
T ss_pred EEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccccHHHHHHH----------------Hh-cCCCEEEECCcCcc
Confidence 9999 899999988877 677 579999999999999984 54432 11 23789999999963
Q ss_pred ccCCCCcCCCCchHHHHHHHHHHHHHH
Q 018671 229 LESTGKTVLPALAQVAERQGKYLFSLL 255 (352)
Q Consensus 229 ~~~~~~~~~~~~~~~A~~qg~~~a~~i 255 (352)
.++.++.|++||..+|+||
T Consensus 653 --------~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 653 --------MELDARRAIAQGTRLALEI 671 (671)
T ss_dssp --------SSCCHHHHHHHHHHHHHHC
T ss_pred --------CchhHHHHHHHHHHHHHhC
Confidence 2446999999999999875
No 90
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.80 E-value=1.7e-19 Score=176.04 Aligned_cols=163 Identities=18% Similarity=0.176 Sum_probs=128.3
Q ss_pred eEeeCCEEEEcCCCCCCCCCCCCccc-cCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHH
Q 018671 20 FKISYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 98 (352)
Q Consensus 20 ~~i~yD~LViAtGs~~~~~~ipG~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~ 98 (352)
.++.||+||||||+.|+.+++||.+. .++ +..++..+.+. . .. ...++++|||+|++|+|
T Consensus 204 ~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~---~~~~~~~~~~~----~--~~---------~~~~~vvViGgG~~gle- 264 (493)
T 1y56_A 204 IEILAKRVVLATGAIDSTMLFENNDMPGVF---RRDFALEVMNV----W--EV---------APGRKVAVTGSKADEVI- 264 (493)
T ss_dssp EEEEESCEEECCCEEECCCCCTTTTSTTEE---EHHHHHHHHHT----S--CB---------CSCSEEEEESTTHHHHH-
T ss_pred EEEECCEEEECCCCCccCCCCCCCCCCCEE---EcHHHHHHHHh----c--cc---------CCCCEEEEECCCHHHHH-
Confidence 37899999999999999999998742 222 23443332211 0 01 12369999999999987
Q ss_pred HHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCCc
Q 018671 99 SGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT 173 (352)
Q Consensus 99 A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~ 173 (352)
+.+++.||+++++ +|++++.+ .+.+++|+
T Consensus 265 ----------------------------------------------~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~ 298 (493)
T 1y56_A 265 ----------------------------------------------QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNH 298 (493)
T ss_dssp ----------------------------------------------HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCC
T ss_pred ----------------------------------------------HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCe
Confidence 3456779999999 79999865 36788899
Q ss_pred EEecceEEEecCCCcch-hhhhcCCCC--CCCCccc-cCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHH
Q 018671 174 EVPYGLLVWSTGVGPST-LVKSLDLPK--SPGGRIG-IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 249 (352)
Q Consensus 174 ~i~~D~vi~a~G~~~~~-~~~~~~l~~--~~~G~i~-Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~ 249 (352)
++++|.||+++|.+|+. +++.+++++ +++|++. ||+++| +.|+|||+|||+. +..+..|..||+
T Consensus 299 ~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~vya~GD~~~----------~~~~~~A~~~g~ 366 (493)
T 1y56_A 299 EYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR--IKDGIYVAGSAVS----------IKPHYANYLEGK 366 (493)
T ss_dssp EEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE--EETTEEECSTTTC----------CCCHHHHHHHHH
T ss_pred EEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC--cCCCEEEEeccCC----------ccCHHHHHHHHH
Confidence 99999999999999995 888888764 4678887 899999 7899999999996 456889999999
Q ss_pred HHHHHHHHHh
Q 018671 250 YLFSLLNRIG 259 (352)
Q Consensus 250 ~~a~~i~~~~ 259 (352)
.+|.||...+
T Consensus 367 ~aa~~i~~~l 376 (493)
T 1y56_A 367 LVGAYILKEF 376 (493)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999998754
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.77 E-value=9.7e-19 Score=172.40 Aligned_cols=212 Identities=13% Similarity=0.160 Sum_probs=133.9
Q ss_pred ccCCCeeEeeCCEEEEcCC--CCCCCCCCCCccccCcC-CCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEEC
Q 018671 14 TLEPWKFKISYDKLVIALG--AEASTFGIHGVKENATF-LREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVG 90 (352)
Q Consensus 14 ~~~~~~~~i~yD~LViAtG--s~~~~~~ipG~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG 90 (352)
+.+.++.++.||+||+||| +.|+.|++||++++.-. +++... . ...++.........++|+|||
T Consensus 126 V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h~~~~------------~-~~~~~~~~~~~~~~krV~VIG 192 (545)
T 3uox_A 126 VTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFHSSRW------------P-TDAEGAPKGVDFTGKRVGVIG 192 (545)
T ss_dssp EEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEEGGGC------------C-BCTTSCBSCCCCBTCEEEEEC
T ss_pred EEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEEcccc------------c-ccccccccccccCCCeEEEEC
Confidence 3445667899999999999 88999999998642110 100000 0 000000000112457999999
Q ss_pred CChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-C-CCCCCc----HHHHHHH---------------------
Q 018671 91 GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E-ILSSFD----DRLRHYA--------------------- 143 (352)
Q Consensus 91 gG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~-~l~~~~----~~~~~~~--------------------- 143 (352)
+|++|+|+|.+|++.+ .+|+++++. . ++|..+ +...+.+
T Consensus 193 ~G~tgve~a~~la~~~--------------~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ 258 (545)
T 3uox_A 193 TGATGVQIIPIAAETA--------------KELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYH 258 (545)
T ss_dssp CSHHHHHHHHHHTTTB--------------SEEEEEESSCCCCEECCCCBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCC
T ss_pred CCccHHHHHHHHHhhC--------------CEEEEEEcCCCccccCCcCCCCHHHHHHHHhhhHHHHHHHhhcccccccc
Confidence 9999999999999876 899999987 4 344322 2211111
Q ss_pred --------------------------------------------------------------------------------
Q 018671 144 -------------------------------------------------------------------------------- 143 (352)
Q Consensus 144 -------------------------------------------------------------------------------- 143 (352)
T Consensus 259 ~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~g~kR~ 338 (545)
T 3uox_A 259 RDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRV 338 (545)
T ss_dssp CBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCTTSSCC
T ss_pred cccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCCCcc
Confidence
Q ss_pred ------HHHHHhCCCEEEe---CceEEEECCeEEEcCCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccC-----
Q 018671 144 ------TTQLSKSGVRLVR---GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGID----- 208 (352)
Q Consensus 144 ------~~~l~~~gV~v~~---~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd----- 208 (352)
.+.|.+.+|+++. ..|++|++++|.++|| ++++|.||+|||+.+.+ ++...++. ..+|....|
T Consensus 339 ~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~ATGf~~~~~~~~~~~i~-g~~G~~l~~~w~~~ 416 (545)
T 3uox_A 339 PMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVTGSLDRIDIR-GKDNVRLIDAWAEG 416 (545)
T ss_dssp CEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCCBSSSCSCTTSEEE-CGGGCBHHHHTTTS
T ss_pred CCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECCccccccccCCCceEE-CCCCccHHHhhccc
Confidence 0112233788884 4899999999999999 99999999999999853 33332221 122322221
Q ss_pred ----CccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 209 ----EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 209 ----~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
..+.++++||+|.+.--.+ ..........+..|++++++.|..+.+
T Consensus 417 ~~~y~g~~~~gfPN~f~~~gp~~------~~~~~s~~~~~e~~~~~i~~~i~~~~~ 466 (545)
T 3uox_A 417 PSTYLGLQARGFPNFFTLVGPHN------GSTFCNVGVCGGLQAEWVLRMISYMKD 466 (545)
T ss_dssp CCCBTTTBCTTCTTEEECSSGGG------TGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeccccCCCCcEEEEeCCCC------CCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 2346679999998843221 112356677899999999999987665
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.75 E-value=1.4e-17 Score=164.36 Aligned_cols=204 Identities=14% Similarity=0.189 Sum_probs=136.0
Q ss_pred ccCCCeeEeeCCEEEEcCC--CCCCCCCCCCccccCc-CCCCHHHHHHHHHHHHHHHhhccCCCCC-HHHhccCCcEEEE
Q 018671 14 TLEPWKFKISYDKLVIALG--AEASTFGIHGVKENAT-FLREVHHAQEIRRKLLLNLMLSDVPGIS-EEEKSRLLHCVVV 89 (352)
Q Consensus 14 ~~~~~~~~i~yD~LViAtG--s~~~~~~ipG~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vvVv 89 (352)
+.+.++.++.||+||+||| +.|+.|++||++++.- .+++.. .+ .......++|+||
T Consensus 138 V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~--------------------~~~~~~~~~~krV~VI 197 (549)
T 4ap3_A 138 VRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTAR--------------------WPHDGVDFTGKRVGVI 197 (549)
T ss_dssp EEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEEGGG--------------------CCTTCCCCBTCEEEEE
T ss_pred EEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEecc--------------------ccccccccCCCEEEEE
Confidence 3445666799999999999 8899999999864311 111100 00 0001234699999
Q ss_pred CCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-C-CCCCCcHHHHH----HH--------------------
Q 018671 90 GGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E-ILSSFDDRLRH----YA-------------------- 143 (352)
Q Consensus 90 GgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~-~l~~~~~~~~~----~~-------------------- 143 (352)
|+|.+|+|+|.+|++.+ .+|+++++. . ++|..++++.+ .+
T Consensus 198 G~G~sgve~a~~l~~~~--------------~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~ 263 (549)
T 4ap3_A 198 GTGSSGIQSIPIIAEQA--------------EQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAERRRLSRESGGGSPH 263 (549)
T ss_dssp CCSHHHHHHHHHHHHHB--------------SEEEEEESSCCCEEECC----CHHHHHHHHHTHHHHHHHHHHSSSSSSC
T ss_pred CCCchHHHHHHHHHhhC--------------CEEEEEECCCCccccCcCCCCCHHHHHHHHhccHHHHHHHHhhcccccc
Confidence 99999999999999876 899999987 3 34433221111 10
Q ss_pred ---------------------------------------------------HHH--------------------------
Q 018671 144 ---------------------------------------------------TTQ-------------------------- 146 (352)
Q Consensus 144 ---------------------------------------------------~~~-------------------------- 146 (352)
.+.
T Consensus 264 ~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~~~kR~ 343 (549)
T 4ap3_A 264 RPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLTPKDHAIGAKRI 343 (549)
T ss_dssp CCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCBTTBCC
T ss_pred ccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCcccc
Confidence 000
Q ss_pred ---------HHhCCCEEE---eCceEEEECCeEEEcCCcEEecceEEEecCCCcch-hhhhcCCCCCCCCccccC-----
Q 018671 147 ---------LSKSGVRLV---RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGID----- 208 (352)
Q Consensus 147 ---------l~~~gV~v~---~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~~-~~~~~~l~~~~~G~i~Vd----- 208 (352)
|.+.+|+++ ...|++|++++|.++|| ++++|.||+|||+.++. ++...++. ..+.+.++
T Consensus 344 ~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i~--g~~G~~l~~~w~~ 420 (549)
T 4ap3_A 344 VLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMTGSLDKLEIV--GRGGRTLKETWAA 420 (549)
T ss_dssp EEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESSTTGGGSEEE--CGGGCBHHHHTTT
T ss_pred CCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccccccCceeEE--CCCCcCHHHhhcc
Confidence 122378888 55899999999999999 99999999999999885 55544321 11223333
Q ss_pred -----CccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 209 -----EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 209 -----~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
..+.++++||.|.+.--.+ ..........+..|++++++.|....+
T Consensus 421 ~~~~y~g~~~~gfPN~f~~~Gp~~------~~~~~s~~~~~e~~~~~i~~~i~~~~~ 471 (549)
T 4ap3_A 421 GPRTYLGLGIDGFPNFFNLTGPGS------PSVLANMVLHSELHVDWVADAIAYLDA 471 (549)
T ss_dssp SCCCBTTTBCTTCTTEEETTCTTS------CGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhccccccCCCCcEEEEeCCCC------CCcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 3455679999998632221 112355667888999999998877655
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.73 E-value=2.3e-17 Score=162.82 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=77.3
Q ss_pred CCEEE---eCceEEEECCeEEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccC---------CccccCCCC
Q 018671 151 GVRLV---RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGID---------EWLRVPSVQ 217 (352)
Q Consensus 151 gV~v~---~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd---------~~l~~~~~~ 217 (352)
+|+++ ...|+++++++|+++| +++++|+||||||+.++ .++..+++. ..+|....+ ..+.++++|
T Consensus 352 ~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~~~~v~~~P 429 (542)
T 1w4x_A 352 NVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALTGALFKIDIR-GVGNVALKEKWAAGPRTYLGLSTAGFP 429 (542)
T ss_dssp TEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTTHHHHTSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTST
T ss_pred CEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccccCcCceeeE-CCCCCCHHHhhcCchheecccccCCCC
Confidence 57776 3379999999999999 99999999999999996 555544332 234554443 236677899
Q ss_pred CEEEE-ccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 218 DVFAV-GDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 218 ~Ifai-GD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
|+|++ |+.+.. ..+...+.|.+|++++|++|....+
T Consensus 430 n~f~~~G~~~~~-------~~~~~~~~~e~q~~~ia~~i~~~~~ 466 (542)
T 1w4x_A 430 NLFFIAGPGSPS-------ALSNMLVSIEQHVEWVTDHIAYMFK 466 (542)
T ss_dssp TEEESSCTTSSG-------GGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCCc-------ccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 998742 1366678999999999999988765
No 94
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.70 E-value=1.1e-16 Score=140.72 Aligned_cols=151 Identities=16% Similarity=0.117 Sum_probs=106.6
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC-----------------CC-------CcHHH
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL-----------------SS-------FDDRL 139 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l-----------------~~-------~~~~~ 139 (352)
.|+|||||++|+++|..|++.+ .+|+++++. ... .. ....+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g--------------~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKG--------------VRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 7999999999999999999877 899999985 110 00 12366
Q ss_pred HHHHHHHHHhC-CCEEEeCceEEEEC--C---eEEEcCCcEEecceEEEecCCCcch-----------------------
Q 018671 140 RHYATTQLSKS-GVRLVRGIVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPST----------------------- 190 (352)
Q Consensus 140 ~~~~~~~l~~~-gV~v~~~~V~~v~~--~---~v~~~~g~~i~~D~vi~a~G~~~~~----------------------- 190 (352)
.+.+.+.+++. |++++..+|+++.. + .|.+++|+++++|.||+|+|...+.
T Consensus 71 ~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~ 150 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLL 150 (232)
T ss_dssp HHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHH
T ss_pred HHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhC
Confidence 77788888887 99998558888764 3 3667888889999999999995432
Q ss_pred -hhhhcCCCCCCC--------Cc---------cccC----CccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHH
Q 018671 191 -LVKSLDLPKSPG--------GR---------IGID----EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248 (352)
Q Consensus 191 -~~~~~~l~~~~~--------G~---------i~Vd----~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg 248 (352)
.+.+.+++++.. |. +..+ ..+..+++|+|||+|||+ . ..+++.|++||
T Consensus 151 ~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~---------~g~~~~~~~~g 220 (232)
T 2cul_A 151 EDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-R---------EGDYARMSEEG 220 (232)
T ss_dssp HHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-S---------CCCHHHHHHHH
T ss_pred HHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-c---------CccHHHHHHHH
Confidence 112233322210 00 0000 012223899999999999 4 23788999999
Q ss_pred HHHHHHHHHHh
Q 018671 249 KYLFSLLNRIG 259 (352)
Q Consensus 249 ~~~a~~i~~~~ 259 (352)
+.+|.+|...+
T Consensus 221 ~~~a~~i~~~l 231 (232)
T 2cul_A 221 KRLAEHLLHEL 231 (232)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhc
Confidence 99999997753
No 95
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.45 E-value=1.2e-12 Score=127.64 Aligned_cols=206 Identities=17% Similarity=0.105 Sum_probs=117.6
Q ss_pred CCeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHH
Q 018671 17 PWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 96 (352)
Q Consensus 17 ~~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~ 96 (352)
+...++.+++||+|||..|..|+.++....+++...+.+.. +. +... .-++|+|+|||+|.||+
T Consensus 196 g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~---~~----~~~~---------~~~gKrV~VVG~G~SA~ 259 (501)
T 4b63_A 196 GEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTL---PA----LLKD---------KSKPYNIAVLGSGQSAA 259 (501)
T ss_dssp CCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHH---HH----HSCC---------TTSCCEEEEECCSHHHH
T ss_pred ceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccch---hh----cccc---------ccCCcEEEEECCcHHHH
Confidence 34567899999999999888776655433333322222211 11 1111 13457999999999999
Q ss_pred HHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC--------------------CcHHHHH--------------
Q 018671 97 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS--------------------FDDRLRH-------------- 141 (352)
Q Consensus 97 e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~--------------------~~~~~~~-------------- 141 (352)
|++.+|++.. ...+|+++.+. .+.|. ++.....
T Consensus 260 ei~~~L~~~~------------~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v 327 (501)
T 4b63_A 260 EIFHDLQKRY------------PNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVV 327 (501)
T ss_dssp HHHHHHHHHS------------TTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCB
T ss_pred HHHHHHHhcC------------CCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhccc
Confidence 9999998753 12789999876 33221 1111111
Q ss_pred ------HHHHHHHh----------CCCEEEeC-ceEEE------------------ECCeEEEcCCcEEecceEEEecCC
Q 018671 142 ------YATTQLSK----------SGVRLVRG-IVKDV------------------DSQKLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 142 ------~~~~~l~~----------~gV~v~~~-~V~~v------------------~~~~v~~~~g~~i~~D~vi~a~G~ 186 (352)
.+.+.+.+ ....+..+ .+.++ +.+++.+.+|+++++|.||+|||+
T Consensus 328 ~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy 407 (501)
T 4b63_A 328 RLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGY 407 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCE
T ss_pred CHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCC
Confidence 11111111 01122322 23332 234567788999999999999999
Q ss_pred Ccch--hh-hhc-CCCCCCCCccccCCccccC-------CCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHH
Q 018671 187 GPST--LV-KSL-DLPKSPGGRIGIDEWLRVP-------SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254 (352)
Q Consensus 187 ~~~~--~~-~~~-~l~~~~~G~i~Vd~~l~~~-------~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~ 254 (352)
+++. ++ ..+ .+..+.+|++.|+.++++. ..++||+.|-|-..... .-|.+...|.+.|+++..-
T Consensus 408 ~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~----~~~~Ls~~a~R~~~I~~~l 482 (501)
T 4b63_A 408 NRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGL----SDSLLSVLAVRGGEMVQSI 482 (501)
T ss_dssp ECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCT----TTTSSTTHHHHHHHHHHHH
T ss_pred CCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCc----chhhHHHHHHHHHHHHHHH
Confidence 9872 32 222 2445778899999877652 23569999954332211 1256667888888776543
No 96
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.23 E-value=3.5e-11 Score=108.70 Aligned_cols=159 Identities=17% Similarity=0.162 Sum_probs=105.2
Q ss_pred cEEEECCChHHHHHHHHHHHh-HhhHHHhhcCCCCCccEEEEEeCC-CCCCC----------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN-EILSS---------------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~-~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~---------------------------- 134 (352)
.|+|||||++|+++|..|++. + .+|+++++. .+...
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G--------------~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 106 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPN--------------VQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAY 106 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTT--------------SCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CEEEECccHHHHHHHHHHHHcCC--------------CeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCc
Confidence 799999999999999999975 5 899999986 33110
Q ss_pred ----------CcHHHHHHHHHHHHh-CCCEEEeC-ceEEEEC--C---eEEEc---------CC-----cEEecceEEEe
Q 018671 135 ----------FDDRLRHYATTQLSK-SGVRLVRG-IVKDVDS--Q---KLILN---------DG-----TEVPYGLLVWS 183 (352)
Q Consensus 135 ----------~~~~~~~~~~~~l~~-~gV~v~~~-~V~~v~~--~---~v~~~---------~g-----~~i~~D~vi~a 183 (352)
....+...+.+.+.+ .||+++.+ +|+++.. + .+.+. +| .++++|.||+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 107 DEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred ccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 123455556666665 69999999 7888853 3 23442 32 57999999999
Q ss_pred cCCCcc--hh----hhhcC--CCCCCCCccccCC-------ccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHH
Q 018671 184 TGVGPS--TL----VKSLD--LPKSPGGRIGIDE-------WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 248 (352)
Q Consensus 184 ~G~~~~--~~----~~~~~--l~~~~~G~i~Vd~-------~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg 248 (352)
+|..+. .+ ...++ +.......+.++. ..++ ..|++|++||++.... +...+.++...|..+|
T Consensus 187 tG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~~~~--g~~~~gp~~~~~~~sG 263 (284)
T 1rp0_A 187 CGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVAEID--GAPRMGPTFGAMMISG 263 (284)
T ss_dssp CCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHHHHH--TCEECCSCCHHHHHHH
T ss_pred CCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehhhhc--CCCCcChHHHHHHHhH
Confidence 998764 11 22222 1111111232221 2233 5699999999875321 2222344677889999
Q ss_pred HHHHHHHHHHhh
Q 018671 249 KYLFSLLNRIGK 260 (352)
Q Consensus 249 ~~~a~~i~~~~~ 260 (352)
+.+|.+|...++
T Consensus 264 ~~~a~~i~~~l~ 275 (284)
T 1rp0_A 264 QKAGQLALKALG 275 (284)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999988765
No 97
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.95 E-value=4.7e-10 Score=109.24 Aligned_cols=146 Identities=18% Similarity=0.200 Sum_probs=100.3
Q ss_pred eCCEEEEcCCCCCCCCCCCCcc-ccCcCCCCHHHHHHHH-HHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHHHHH
Q 018671 23 SYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIR-RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSG 100 (352)
Q Consensus 23 ~yD~LViAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~ 100 (352)
.||.|++++|+.|..+++++.. +..+..+...+..++. .++ ... + ..........+|+|||||++|+.+|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~-~~~~~~~~~~dVvIVGgG~aGl~aA~ 109 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRA----SQP--V-YQQGQACTNTKCLVVGAGPCGLRAAV 109 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHH----TSG--G-GGGGTTTTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhh----ccc--c-ccCccccCCCCEEEECccHHHHHHHH
Confidence 4788999999998776666542 3445555656655441 111 000 0 00001123468999999999999999
Q ss_pred HHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-----CCc----------------------------HHHHHHHHHH
Q 018671 101 ELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-----SFD----------------------------DRLRHYATTQ 146 (352)
Q Consensus 101 ~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-----~~~----------------------------~~~~~~~~~~ 146 (352)
.|++.+ .+|+|+|+. .+.. ..+ ..+.+.+.+.
T Consensus 110 ~La~~G--------------~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 175 (497)
T 2bry_A 110 ELALLG--------------ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKV 175 (497)
T ss_dssp HHHHTT--------------CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHH
T ss_pred HHHHCC--------------CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHH
Confidence 999877 899999986 3211 011 4566677788
Q ss_pred HHhCCCEEEeC-ceEEEECC-------eEEE--c-CC--cEEecceEEEecCCCcc
Q 018671 147 LSKSGVRLVRG-IVKDVDSQ-------KLIL--N-DG--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 147 l~~~gV~v~~~-~V~~v~~~-------~v~~--~-~g--~~i~~D~vi~a~G~~~~ 189 (352)
+++.||+++.+ +|++++.+ .|.+ . +| +++.+|.||.|+|..+.
T Consensus 176 ~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 176 ALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 88899999999 89998742 4556 3 56 47999999999999875
No 98
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.83 E-value=1.3e-08 Score=95.79 Aligned_cols=92 Identities=17% Similarity=0.378 Sum_probs=72.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHH-------------HHHHHHHhC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-------------YATTQLSKS 150 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~-------------~~~~~l~~~ 150 (352)
.+|+|||||++|+.+|..|... +.+|+++++.+.++...+.+.+ ...+.+++.
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~--------------~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~ 75 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGK--------------CDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKN 75 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTT--------------CSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHT
T ss_pred CCEEEEcCcHHHHHHHHHHhCC--------------CCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHC
Confidence 4899999999999999999332 3899999987544332222222 234567789
Q ss_pred CCEEEeC-ceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 151 GVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 151 gV~v~~~-~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
||+++.+ +|++++.+ .|.+++|+++.||.+|+|||.+|.
T Consensus 76 ~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~ 117 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIAN 117 (385)
T ss_dssp TCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcC
Confidence 9999999 89999874 788999999999999999999876
No 99
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.82 E-value=1.7e-09 Score=103.42 Aligned_cols=94 Identities=22% Similarity=0.420 Sum_probs=71.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC---CCCc---------HHHHHHHHHHHHhCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SSFD---------DRLRHYATTQLSKSG 151 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---~~~~---------~~~~~~~~~~l~~~g 151 (352)
|+|||||||++|+.+|..|+++. ++.+||||++.+.. |.+. +++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 48999999999999999998765 23899999987421 2111 111111234466789
Q ss_pred CEEEeCceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 152 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 152 V~v~~~~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
|+++.++|++|+.+ .|++++|++++||.+|+|||.++.
T Consensus 71 v~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred cEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 99998899999875 799999999999999999998754
No 100
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.78 E-value=8.4e-09 Score=97.42 Aligned_cols=95 Identities=25% Similarity=0.306 Sum_probs=72.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC--CCCCcHHH---------HHHHHHHHHhCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI--LSSFDDRL---------RHYATTQLSKSG 151 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~--l~~~~~~~---------~~~~~~~l~~~g 151 (352)
+|+|||||||+.|+.+|..|++.. .+.+|+||++.+. ...+...+ ...-.+.+.++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 479999999999999999998764 2379999998632 11111111 111124566789
Q ss_pred CEEEeCceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 152 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 152 V~v~~~~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
|+++.++|++|+++ .+.+.+|++++||.+|+|+|.+++
T Consensus 70 v~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 70 IQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp CEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccc
Confidence 99999999999875 688899999999999999999876
No 101
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.74 E-value=1.8e-08 Score=96.40 Aligned_cols=95 Identities=25% Similarity=0.424 Sum_probs=74.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC---CC---------CcHHHHHHHHHHHHhCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SS---------FDDRLRHYATTQLSKSG 151 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---~~---------~~~~~~~~~~~~l~~~g 151 (352)
++|+|||||++|+++|..|++... .+.+|+||++.+.. |. ...++...+.+.+++.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~-----------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG-----------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG-----------GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT
T ss_pred CcEEEECCcHHHHHHHHHHhccCC-----------CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC
Confidence 589999999999999999988321 12899999987422 21 11233334566778899
Q ss_pred CEEEeCceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 152 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 152 V~v~~~~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
|+++.++|++++.+ .|.+++|+++.||.+|+|+|.+|+
T Consensus 74 v~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 74 IHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp CEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC
T ss_pred CEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC
Confidence 99987799999875 788899999999999999999887
No 102
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.73 E-value=4.1e-08 Score=88.22 Aligned_cols=91 Identities=20% Similarity=0.319 Sum_probs=73.7
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC----------CCC----CcHHHHHHHHHHHHhC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----------LSS----FDDRLRHYATTQLSKS 150 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~----------l~~----~~~~~~~~~~~~l~~~ 150 (352)
+|+|||||++|+.+|..|++.+ .+|+++++... ++. ...++...+.+.+++.
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRAR--------------KNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERY 69 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTC
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 7999999999999999999876 89999996421 111 1246777788888887
Q ss_pred -CCEEEeCceEEEECC----eEEEcCCcEEecceEEEecCCCcc
Q 018671 151 -GVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 151 -gV~v~~~~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+++++.++|++++.+ .|.+++|+++.+|.+|+|+|..|.
T Consensus 70 ~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 70 PTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp TTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE
T ss_pred CCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC
Confidence 788887788888754 577788989999999999999876
No 103
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.72 E-value=5.4e-08 Score=89.67 Aligned_cols=90 Identities=17% Similarity=0.240 Sum_probs=72.2
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CC---------------------CCCC-------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI---------------------LSSF------- 135 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~---------------------l~~~------- 135 (352)
+|+|||||++|+.+|..|++.+ .+|+++++. .+ ++.+
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~g--------------~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRSG--------------LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQG 70 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHSS--------------CCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCcc
Confidence 7999999999999999999876 899999986 32 1111
Q ss_pred ----cHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce---EEEcCCcEEecceEEEecCCCcc
Q 018671 136 ----DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 136 ----~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
...+.+++.+.+++.|++++.+ +|++++. +. |.+++| ++.+|.||+|+|....
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 71 PYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 1578888888899999999998 8988865 33 556666 8999999999997543
No 104
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.67 E-value=1.2e-07 Score=86.71 Aligned_cols=92 Identities=20% Similarity=0.280 Sum_probs=74.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC------------CCCC-----cHHHHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 146 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------------l~~~-----~~~~~~~~~~~ 146 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++..+ .+.+ ..++.+.+.+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 74 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQ--------------LSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQ 74 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHcC--------------CcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHH
Confidence 47999999999999999999876 79999998622 1222 24677778888
Q ss_pred HHhCCCEEEeCceEEEECC-------eEEEcCCcEEecceEEEecCCCcc
Q 018671 147 LSKSGVRLVRGIVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 147 l~~~gV~v~~~~V~~v~~~-------~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+++.|++++.++|.+++.+ .|.+.+|+++.+|.+|+|+|..|.
T Consensus 75 ~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 75 AEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp HHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 8899999988788887643 466778889999999999999775
No 105
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.66 E-value=1e-07 Score=86.66 Aligned_cols=92 Identities=13% Similarity=0.247 Sum_probs=75.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC---CC--------CCCC----cHHHHHHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EI--------LSSF----DDRLRHYATTQLS 148 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~---~~--------l~~~----~~~~~~~~~~~l~ 148 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++. .. .|.+ ..++.+.+.+.++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYM--------------LKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHCC--------------CcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 48999999999999999999876 789999984 11 1222 3577788888888
Q ss_pred hCCCEEEeCceEEEECC----eEEEcCCcEEecceEEEecCCCcc
Q 018671 149 KSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 149 ~~gV~v~~~~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+.|++++..+|.+++.+ .+.+.+|+++.+|.+|+|+|..|.
T Consensus 82 ~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 82 KYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp TTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred HcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 99999988878888765 467778889999999999999876
No 106
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.64 E-value=7.2e-08 Score=88.25 Aligned_cols=93 Identities=22% Similarity=0.283 Sum_probs=74.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-----C------------CCCC-----cHHHH
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-----I------------LSSF-----DDRLR 140 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-----~------------l~~~-----~~~~~ 140 (352)
.++|+|||||++|+.+|..|++.+ .+|+++++.. . .|.+ ..++.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 87 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAE--------------IKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELM 87 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHH
Confidence 458999999999999999999876 8899999832 1 1222 35788
Q ss_pred HHHHHHHHhCCCEEEeCceEEEECC--eEEE-----cCCcEEecceEEEecCCCcc
Q 018671 141 HYATTQLSKSGVRLVRGIVKDVDSQ--KLIL-----NDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 141 ~~~~~~l~~~gV~v~~~~V~~v~~~--~v~~-----~~g~~i~~D~vi~a~G~~~~ 189 (352)
..+.+.+++.|++++.+.|.+++.+ .+.+ .++.++.+|.+|+|+|..|.
T Consensus 88 ~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 88 DRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 8888999999999998888888764 3444 46778999999999999765
No 107
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.62 E-value=1.5e-07 Score=85.25 Aligned_cols=91 Identities=19% Similarity=0.272 Sum_probs=73.0
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCCCC------------CCCC-----cHHHHHHHHHH
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI------------LSSF-----DDRLRHYATTQ 146 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~------------l~~~-----~~~~~~~~~~~ 146 (352)
+|+|||||++|+.+|..|++.+ . +|+++++... .|.+ .+.+.+.+.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGG--------------VKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHHHCC--------------CCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHH
Confidence 7999999999999999998866 7 8999987521 1222 25677778888
Q ss_pred HHhCCCEEEeCceEEEEC--C--eEEEcCCcEEecceEEEecCCCcc
Q 018671 147 LSKSGVRLVRGIVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 147 l~~~gV~v~~~~V~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+++.|++++..+|.+++. + .+.+.+|+++.+|.+|+|+|..|.
T Consensus 69 ~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 69 CFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp HHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC
Confidence 888999998877877763 4 466788889999999999998765
No 108
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.62 E-value=1.6e-07 Score=85.02 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=72.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEE-EeCCCC------------CCCCc-----HHHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL-IEANEI------------LSSFD-----DRLRHYATT 145 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~l-v~~~~~------------l~~~~-----~~~~~~~~~ 145 (352)
++|+|||||++|+.+|..|++.+ .+|++ +++..+ .|.++ .++..++.+
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGG--------------LKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSE 70 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHT--------------CSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHH
Confidence 48999999999999999999876 78888 886321 23333 578888889
Q ss_pred HHHhCCCEEEeCceEEE-EC--CeEE--EcCCcEEecceEEEecCCCcc
Q 018671 146 QLSKSGVRLVRGIVKDV-DS--QKLI--LNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 146 ~l~~~gV~v~~~~V~~v-~~--~~v~--~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+++.+++++.++|.++ +. +.+. +.++.++.+|.+|+|+|..|.
T Consensus 71 ~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~ 119 (315)
T 3r9u_A 71 QCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK 119 (315)
T ss_dssp HHTTTCCEEECCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHcCcEEEEEEEEEEecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC
Confidence 99999999998888888 54 4454 543338999999999999775
No 109
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.61 E-value=4.4e-10 Score=108.74 Aligned_cols=195 Identities=15% Similarity=0.119 Sum_probs=105.3
Q ss_pred CeeEeeCCEEEEcCCCCCCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCChHHHH
Q 018671 18 WKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVE 97 (352)
Q Consensus 18 ~~~~i~yD~LViAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e 97 (352)
++.++.+|.||+|||+.+..+.++.. ....+- +...+-.+. .+.. .+.+..+...+++++|+| |++
T Consensus 159 ~~g~~~a~~VVlAtGg~~~~~~~~~~-~~~~tG----dgi~~a~~a-----Ga~~--~d~e~~q~~p~~~~~ggg--~~~ 224 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSYLYEYSST-QSTNIG----DGMAIAFKA-----GTIL--ADMEFVQFHPTVTSLDGE--VFL 224 (472)
T ss_dssp TEEECCCSEEEECCCCCGGGSSSBSS-CTTCSC----HHHHHHHHT-----TCCE--ECTTCEEEEEEEECGGGC--CEE
T ss_pred CCCeEEeeeEEECCCCCcccCccccC-CCCCch----HHHHHHHHc-----CCCE--eCCcceEEEeEEEccCCC--cee
Confidence 44568899999999998765544221 111111 111111000 0000 011111222244556766 888
Q ss_pred HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCCcHH--------HHHHHHHHHHhCCCEEEeC-c-eEEEECCe
Q 018671 98 FSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDR--------LRHYATTQLSKSGVRLVRG-I-VKDVDSQK 166 (352)
Q Consensus 98 ~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~--------~~~~~~~~l~~~gV~v~~~-~-V~~v~~~~ 166 (352)
++..+...+ ..+ +.+.+ ++++.+++. +...+.+.+++.+. ++.+ + +. +
T Consensus 225 ~ae~~~~~G--------------~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~~~----~- 283 (472)
T 2e5v_A 225 LTETLRGEG--------------AQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSKIE----D- 283 (472)
T ss_dssp CCTHHHHTT--------------CEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTTCT----T-
T ss_pred eehhhcCCc--------------eEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccchH----H-
Confidence 887776654 455 56555 677554443 25566666776664 3332 1 11 0
Q ss_pred EEEcCCcEEe-cceEEEecCCCcchhhhhcCCCCCCCCccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHH
Q 018671 167 LILNDGTEVP-YGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 245 (352)
Q Consensus 167 v~~~~g~~i~-~D~vi~a~G~~~~~~~~~~~l~~~~~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~ 245 (352)
+. +.++ .+.++++.|..|+..++-.+......|.|.||+++|+ +.|+|||+|||+... ..|. ...+..|.
T Consensus 284 --~~--~~~~~~~~~~~~~G~dp~~~i~v~p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~~~-~hg~---~rl~~~sl 354 (472)
T 2e5v_A 284 --FE--RKFPVVAKYLARHGHNYKVKIPIFPAAHFVDGGIRVNIRGES-NIVNLYAIGEVSDSG-LHGA---NRLASNSL 354 (472)
T ss_dssp --HH--HHCHHHHHHHHHTTCCTTSCEECEEEEEEESCEEECCTTCBC-SSBTEEECGGGEECS-SSTT---SCCTTHHH
T ss_pred --HH--HHhHHHHHHHHHhCcCcccceEeehhhceeCCCeEECCCCcc-ccCCEEecchhcccc-cCCC---CCCCcccH
Confidence 11 2233 4677778898887211111111223588999999999 899999999998621 1122 24555666
Q ss_pred HHHHHHHHHHH
Q 018671 246 RQGKYLFSLLN 256 (352)
Q Consensus 246 ~qg~~~a~~i~ 256 (352)
.+|.+.+++..
T Consensus 355 ~~~~v~G~~a~ 365 (472)
T 2e5v_A 355 LEGLVFGINLP 365 (472)
T ss_dssp HHHHHHHHHGG
T ss_pred HHHHHHHHHHH
Confidence 66666655443
No 110
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.61 E-value=8.3e-08 Score=91.65 Aligned_cols=94 Identities=26% Similarity=0.378 Sum_probs=71.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCC----cH----------HHHHHHHHHHHh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF----DD----------RLRHYATTQLSK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~----~~----------~~~~~~~~~l~~ 149 (352)
.+|+|||||++|+.+|..|++.+. +.+|+++++...++.. .. .+.....+.+++
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~------------~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 72 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGW------------EGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAA 72 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------------CSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHH
T ss_pred CcEEEEcCHHHHHHHHHHHHccCc------------CCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHh
Confidence 489999999999999999998761 1489999986433211 11 111112356778
Q ss_pred CCCEEEeC-ceEEEEC--CeEEEcCCcEEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~--~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.||+++.+ +|+.++. ..|.+++|+++.+|.+|+|+|.+|.
T Consensus 73 ~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 73 QNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPR 115 (431)
T ss_dssp TTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCcc
Confidence 89999998 7999986 4788888989999999999999886
No 111
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.61 E-value=1.6e-07 Score=89.07 Aligned_cols=94 Identities=21% Similarity=0.284 Sum_probs=72.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHH-------------HHHHHHHhC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-------------YATTQLSKS 150 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~-------------~~~~~l~~~ 150 (352)
++|+|||||++|+.+|..|++.+. +.+|+++++.+.++...+.+.. ...+.+++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~------------~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~ 70 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGF------------EGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------------CSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHT
T ss_pred CCEEEEcccHHHHHHHHHHHccCc------------CCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHC
Confidence 389999999999999999998761 2569999987443321111111 123456788
Q ss_pred CCEEEeC-ceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 151 GVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 151 gV~v~~~-~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+|+++.+ +|+.++.+ .|.+.+|+++.+|.+|+|||.+|.
T Consensus 71 ~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~ 112 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRAR 112 (410)
T ss_dssp TCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCccc
Confidence 9999999 89999875 788899999999999999998876
No 112
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.60 E-value=8e-08 Score=87.73 Aligned_cols=88 Identities=23% Similarity=0.269 Sum_probs=71.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CC---------------CCC----cHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL---------------SSF----DDRLRHYA 143 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l---------------~~~----~~~~~~~~ 143 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++.+ +. +.+ ..++...+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQ--------------ASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 48999999999999999998865 8999999863 21 111 36777888
Q ss_pred HHHHHhCCCEEEeC-ceEEEECC-----eEEEcCCcEEecceEEEecCC
Q 018671 144 TTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 144 ~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~~g~~i~~D~vi~a~G~ 186 (352)
.+.+++.+++++.+ +|.+++.+ .|.+.+|+ +.+|.+|+|+|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 88888899999987 89888753 46677775 999999999999
No 113
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.58 E-value=5.8e-07 Score=84.04 Aligned_cols=92 Identities=24% Similarity=0.262 Sum_probs=74.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC-----------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----------------------------- 134 (352)
.+|+|||||++|+.+|..|++.+ .+|+++|+......
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G--------------~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 77 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNG--------------WDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH 77 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC
Confidence 48999999999999999999876 89999987532110
Q ss_pred ----------------C-----------cHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-eEEEcCCcEEecceEEEecC
Q 018671 135 ----------------F-----------DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-KLILNDGTEVPYGLLVWSTG 185 (352)
Q Consensus 135 ----------------~-----------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-~v~~~~g~~i~~D~vi~a~G 185 (352)
+ ...+.+.+.+.+.+.||+++.+ +|++++.+ .|++.+|+++.+|.||.|+|
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG 157 (379)
T 3alj_A 78 TPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADG 157 (379)
T ss_dssp CCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCC
T ss_pred CccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCC
Confidence 0 0345667777888899999999 79888744 67788899999999999999
Q ss_pred CCcc
Q 018671 186 VGPS 189 (352)
Q Consensus 186 ~~~~ 189 (352)
..+.
T Consensus 158 ~~s~ 161 (379)
T 3alj_A 158 VGSK 161 (379)
T ss_dssp TTCH
T ss_pred ccHH
Confidence 9875
No 114
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.57 E-value=3.6e-08 Score=93.39 Aligned_cols=95 Identities=17% Similarity=0.268 Sum_probs=72.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-C--CCC---------CcHHHHHHHHHHHHhCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I--LSS---------FDDRLRHYATTQLSKSG 151 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~--l~~---------~~~~~~~~~~~~l~~~g 151 (352)
++|+|||||++|+++|..|++... .+.+|+|+++.+ + .+. ...++...+.+.+++.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~-----------~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG-----------SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG 70 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG-----------GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC-----------CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC
Confidence 489999999999999999998211 128999999863 1 111 12233445667778889
Q ss_pred CEEEeCceEEEECC--eEEEcCCc----EEecceEEEecCCCcc
Q 018671 152 VRLVRGIVKDVDSQ--KLILNDGT----EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 152 V~v~~~~V~~v~~~--~v~~~~g~----~i~~D~vi~a~G~~~~ 189 (352)
|+++.++|++++.+ .|.+.+++ ++.+|.+|+|+|.+|.
T Consensus 71 v~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 71 IQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred eEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 99998899999876 78887775 3999999999999876
No 115
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.55 E-value=3.7e-07 Score=83.62 Aligned_cols=91 Identities=16% Similarity=0.216 Sum_probs=72.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CC---------------CCC----cHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL---------------SSF----DDRLRHYA 143 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l---------------~~~----~~~~~~~~ 143 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++.+ +. +.+ ..++.+.+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 71 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRG--------------LSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGL 71 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHH
Confidence 38999999999999999998765 8999999863 21 111 25677777
Q ss_pred HHHHHhCCCEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecCCCc
Q 018671 144 TTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 144 ~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
.+.+++.+++++.+ +|.+++.+ .|.+.+|+++.+|.+|+|+|..+
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSE
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCC
Confidence 88888889999888 79888653 36667788899999999999953
No 116
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.55 E-value=2.4e-07 Score=83.94 Aligned_cols=91 Identities=16% Similarity=0.203 Sum_probs=73.1
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC---CCC--------CC----CcHHHHHHHHHHHHh
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EIL--------SS----FDDRLRHYATTQLSK 149 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~---~~l--------~~----~~~~~~~~~~~~l~~ 149 (352)
+|+|||||++|+.+|..|++.+ .+|+++++. ... +. ..+.+.+.+.+.+++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKG--------------IRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999998866 789999752 111 11 124677888888889
Q ss_pred CCCEEEeC-ceEEEECC-------eEEEcCCcEEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~~-------~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.|++++.+ +|..++.+ .|.+++|+++.+|.+|+|+|..|.
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 99999999 89999643 466778889999999999998775
No 117
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.55 E-value=6e-07 Score=83.25 Aligned_cols=90 Identities=20% Similarity=0.232 Sum_probs=72.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-C-------C--------CCC----cHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I-------L--------SSF----DDRLRHYA 143 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~-------l--------~~~----~~~~~~~~ 143 (352)
.+|+|||||++|+.+|..|++.+ .+|+|+++.+ + . +.+ ..++.+.+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNN--------------ISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESL 80 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHH
Confidence 48999999999999999998765 8999999852 2 1 111 25677778
Q ss_pred HHHHHhCCCEEEeC-ceEEEECC-----eEEEcCCcEEecceEEEecCCC
Q 018671 144 TTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 144 ~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~~g~~i~~D~vi~a~G~~ 187 (352)
.+.+++.+++++.+ +|++++.+ .|.+.+|+++.+|.+|+|+|..
T Consensus 81 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 81 WAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 88888899999988 89988743 4777788899999999999994
No 118
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.53 E-value=1.7e-07 Score=88.68 Aligned_cols=94 Identities=22% Similarity=0.375 Sum_probs=72.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC----Cc----------HHHHHHHHHHHHh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----FD----------DRLRHYATTQLSK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----~~----------~~~~~~~~~~l~~ 149 (352)
++|+|||||++|+.+|..|++.+. +.+|+++++.+.++. +. ..+.....+.+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~------------~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 69 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKY------------PGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQD 69 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------------CSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHH
T ss_pred CCEEEEcChHHHHHHHHHHHhhCc------------CCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHh
Confidence 489999999999999999998761 148999998643221 11 1112224466778
Q ss_pred CCCEEEeCceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 150 SGVRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+|+++..+|++++.+ .+.+.+|+++.+|.+|+|||.+|.
T Consensus 70 ~~i~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~ 111 (404)
T 3fg2_P 70 QAIELISDRMVSIDREGRKLLLASGTAIEYGHLVLATGARNR 111 (404)
T ss_dssp TTEEEECCCEEEEETTTTEEEESSSCEEECSEEEECCCEEEC
T ss_pred CCCEEEEEEEEEEECCCCEEEECCCCEEECCEEEEeeCCCcc
Confidence 9999988779999875 688899999999999999998765
No 119
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.51 E-value=4.3e-07 Score=88.98 Aligned_cols=102 Identities=17% Similarity=0.239 Sum_probs=78.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-C-------------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I------------------------------- 131 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~------------------------------- 131 (352)
..|+|||||++|+.+|..|++.+ .+|+|+|+.+ +
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G--------------~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMG--------------FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTT--------------CCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 58999999999999999999876 7889998752 1
Q ss_pred -----C------CCC------------------------------cHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----
Q 018671 132 -----L------SSF------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---- 165 (352)
Q Consensus 132 -----l------~~~------------------------------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~---- 165 (352)
+ +.. ...+.+.+.+.+++.|++++.+ +|+++..+
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 0 000 1445666777788899999999 89888642
Q ss_pred -eEEEcCCcEEecceEEEecCCCcch---hhhhcCCCC
Q 018671 166 -KLILNDGTEVPYGLLVWSTGVGPST---LVKSLDLPK 199 (352)
Q Consensus 166 -~v~~~~g~~i~~D~vi~a~G~~~~~---~~~~~~l~~ 199 (352)
.|.+.+|+++.+|.||+|+|..+.. .+...++..
T Consensus 254 ~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~ 291 (549)
T 3nlc_A 254 TGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYM 291 (549)
T ss_dssp EEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCCC
T ss_pred EEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCCc
Confidence 3778899999999999999999863 445555543
No 120
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.51 E-value=6e-08 Score=92.51 Aligned_cols=94 Identities=22% Similarity=0.406 Sum_probs=71.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC---CCC---------cHHHHHHHHHHHHhCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SSF---------DDRLRHYATTQLSKSG 151 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---~~~---------~~~~~~~~~~~l~~~g 151 (352)
++|+|||||++|+++|..|+++. .+.+|+|+++.+.. +.+ ..++...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 48999999999999999998832 13899999987422 111 1112222334566789
Q ss_pred CEEEeCceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 152 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 152 V~v~~~~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
|+++.++|+.++.+ .|.+++++++.+|.+|+|+|.+++
T Consensus 71 v~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred CEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccc
Confidence 99998889999875 688889989999999999999876
No 121
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.50 E-value=2.3e-07 Score=88.03 Aligned_cols=94 Identities=24% Similarity=0.372 Sum_probs=73.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC----C----------cHHHHHHHHHHHHh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----F----------DDRLRHYATTQLSK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----~----------~~~~~~~~~~~l~~ 149 (352)
.+|+|||||++|+.+|..|++.+. +.+|+++++.+.++. + ...+.....+.+.+
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~~g~------------~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 77 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQNGF------------EGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWED 77 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC------------CSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHH
T ss_pred CcEEEECChHHHHHHHHHHHccCc------------CCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHH
Confidence 489999999999999999998761 146999998632221 1 11222233566788
Q ss_pred CCCEEEeC-ceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+|+++.+ +|+.++.+ .|.+.+|+++.+|.+|+|||.+|.
T Consensus 78 ~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 120 (415)
T 3lxd_A 78 KAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPR 120 (415)
T ss_dssp TTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECC
T ss_pred CCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccC
Confidence 99999999 89999876 688889999999999999998776
No 122
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.49 E-value=5.1e-07 Score=81.77 Aligned_cols=91 Identities=19% Similarity=0.278 Sum_probs=67.6
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC-------C-------CCcHHHHHHHHHHHHhC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------S-------SFDDRLRHYATTQLSKS 150 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l-------~-------~~~~~~~~~~~~~l~~~ 150 (352)
.|+||||||+|+.+|..+++.+ .+|++++..... | ..++++.+...+.+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRAR--------------KQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 6999999999999999998876 899999975211 1 12355666666666666
Q ss_pred C-CEEEeCceEEEEC---C--eEEEcCCcEEecceEEEecCCCcc
Q 018671 151 G-VRLVRGIVKDVDS---Q--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 151 g-V~v~~~~V~~v~~---~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+ +.+....+..+.. + .+.+.+|+++.+|.+|+|||.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 74 PSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE 118 (304)
T ss_dssp TTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE
T ss_pred CCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc
Confidence 5 5555555555532 1 577889999999999999999876
No 123
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.49 E-value=3.2e-07 Score=86.93 Aligned_cols=94 Identities=24% Similarity=0.364 Sum_probs=70.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC----CcHHHHHH-HHH-----HHHhCCCE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----FDDRLRHY-ATT-----QLSKSGVR 153 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----~~~~~~~~-~~~-----~l~~~gV~ 153 (352)
.+|+|||||++|+.+|..|++.+. +.+|+++++...++. ++..+... ..+ .+++.||+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~------------~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 75 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQAGY------------QGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVE 75 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHHTC------------CSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCE
T ss_pred CcEEEECChHHHHHHHHHHHccCC------------CCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCE
Confidence 489999999999999999998761 146999998743332 22111110 000 35567999
Q ss_pred EEeC-ceEEEEC--CeEEEcCCcEEecceEEEecCCCcc
Q 018671 154 LVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 154 v~~~-~V~~v~~--~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
++.+ +|+.++. ..|.+++|+++.+|.+|+|||.+|.
T Consensus 76 ~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 76 WLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp EEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred EEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCC
Confidence 9999 6999986 4788888989999999999999876
No 124
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.48 E-value=6e-07 Score=82.43 Aligned_cols=92 Identities=18% Similarity=0.234 Sum_probs=73.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC------------CCCC-----cHHHHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 146 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------------l~~~-----~~~~~~~~~~~ 146 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++... .|.+ .+++.+.+.+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 80 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQ--------------LAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQ 80 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTT--------------CCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999998876 78999985311 1222 25677788888
Q ss_pred HHhCCCEEEeCceEEEECC---eE-EEcCCcEEecceEEEecCCCcc
Q 018671 147 LSKSGVRLVRGIVKDVDSQ---KL-ILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 147 l~~~gV~v~~~~V~~v~~~---~v-~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+++.|++++.+.|.+++.+ .| .+++|+++.+|.+|+|+|..|.
T Consensus 81 ~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 81 ALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp HHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 8899999998888888752 46 6778889999999999998765
No 125
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.48 E-value=7.2e-07 Score=82.75 Aligned_cols=91 Identities=15% Similarity=0.305 Sum_probs=69.8
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCCCC--------------CCC---------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI--------------LSS--------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~--------------l~~--------------- 134 (352)
+|+|||||++|+.+|..|++.+ . +|+++++..+ .+.
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~g--------------~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 71 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDFG--------------ITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAIS 71 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSS
T ss_pred cEEEECcCHHHHHHHHHHHHcC--------------CCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcc
Confidence 7999999999999999998865 6 8999987530 000
Q ss_pred -------------C-cHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecCCCcch
Q 018671 135 -------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST 190 (352)
Q Consensus 135 -------------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~~~~ 190 (352)
. ...+..++.+.+++.|++++.+ +|.+++.+ .|.+.++ ++.+|.||+|+|..+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 72 MDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFP 145 (369)
T ss_dssp TTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSB
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCcc
Confidence 0 1345566777778899999998 79888754 4555666 69999999999997653
No 126
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.45 E-value=8e-07 Score=80.53 Aligned_cols=91 Identities=23% Similarity=0.315 Sum_probs=72.2
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC----C-------------CCC-----cHHHHHH
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L-------------SSF-----DDRLRHY 142 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~----l-------------~~~-----~~~~~~~ 142 (352)
.|+|||||++|+.+|..+++++ .+|+++|+... + |.+ ++++.+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g--------------~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSS--------------LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMN 71 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHH
Confidence 7999999999999999999877 78999987421 0 112 2567778
Q ss_pred HHHHHHhCCCEEEeCceEEEECC----eEEEcCCcEEecceEEEecCCCcc
Q 018671 143 ATTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 143 ~~~~l~~~gV~v~~~~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
..+.+++.++++....+..+..+ .+.+.++.++.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 72 MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK 122 (314)
T ss_dssp HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEccccccc
Confidence 88888999999888776665543 456678889999999999999875
No 127
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.44 E-value=7.9e-07 Score=84.41 Aligned_cols=90 Identities=18% Similarity=0.237 Sum_probs=70.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CCC---------------------------C-
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS---------------------------S- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~---------------------------~- 134 (352)
..|+|||||++|+.+|..|++.+ .+|+|+|+.+ +.. .
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G--------------~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~ 93 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRG--------------RRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHF 93 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHH
Confidence 38999999999999999999876 7899998753 210 0
Q ss_pred ------------------------------------CcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--C--eEEEcCCc
Q 018671 135 ------------------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGT 173 (352)
Q Consensus 135 ------------------------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~~~g~ 173 (352)
....+.+.+.+.+++.||+++.+ +|+++.. + .|.+.+|
T Consensus 94 ~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g- 172 (417)
T 3v76_A 94 CKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG- 172 (417)
T ss_dssp THHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-
T ss_pred HHHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-
Confidence 01255666777788889999998 8988853 3 3555666
Q ss_pred EEecceEEEecCCCc
Q 018671 174 EVPYGLLVWSTGVGP 188 (352)
Q Consensus 174 ~i~~D~vi~a~G~~~ 188 (352)
++.+|.||+|+|..+
T Consensus 173 ~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 173 TVDAASLVVASGGKS 187 (417)
T ss_dssp EEEESEEEECCCCSS
T ss_pred EEEeeEEEECCCCcc
Confidence 899999999999886
No 128
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.44 E-value=5.7e-07 Score=83.95 Aligned_cols=90 Identities=32% Similarity=0.496 Sum_probs=68.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCc-------------HHHHHHHHHHHHhC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD-------------DRLRHYATTQLSKS 150 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~-------------~~~~~~~~~~l~~~ 150 (352)
.+++|||||++|+.+|..|++. + +|+|+++.+.++... .++.....+.+++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~--------------g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 73 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT--------------Y-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKR 73 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--------------S-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHhhc--------------C-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhC
Confidence 4899999999999999999653 3 899999874322111 11112234567788
Q ss_pred CCEEEeC-ceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 151 GVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 151 gV~v~~~-~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
||+++.+ +|+.++.+ .|. .+|+++.+|.+|+|||.+|.
T Consensus 74 ~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~ 114 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAR 114 (367)
T ss_dssp TEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEEC
T ss_pred CcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCC
Confidence 9999999 79999876 455 67889999999999999876
No 129
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.44 E-value=7.2e-07 Score=81.19 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=70.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC------------CCCC----cHHHHHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF----DDRLRHYATTQL 147 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------------l~~~----~~~~~~~~~~~l 147 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++... .|.+ ..++.+.+.+.+
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSG--------------FSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHA 82 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHH
Confidence 47999999999999999999876 78999997522 1221 246677777888
Q ss_pred HhCCCEEEeCceEEEEC--C--eEEEcCCcEEecceEEEecCCCcc
Q 018671 148 SKSGVRLVRGIVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 148 ~~~gV~v~~~~V~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
++.|++++..+|.+++. + .|.+ +++++.+|.+|+|+|..|.
T Consensus 83 ~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 83 ANYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp HTTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred HHcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 88999998877877763 4 3444 6678999999999998765
No 130
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.44 E-value=9.3e-07 Score=80.32 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=72.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC------------CCCC-----cHHHHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 146 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------------l~~~-----~~~~~~~~~~~ 146 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++... .|.+ .+++.+.+.+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARAN--------------LQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEH 71 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHH
Confidence 38999999999999999998866 78899985321 1222 35677778888
Q ss_pred HHhCCCEEEeCceEEEECC--eEE-EcCCcEEecceEEEecCCCcc
Q 018671 147 LSKSGVRLVRGIVKDVDSQ--KLI-LNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 147 l~~~gV~v~~~~V~~v~~~--~v~-~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+++.+++++.+++..++.+ .+. +.+++++.+|.+|+|+|..|.
T Consensus 72 ~~~~~~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 72 ATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASAR 117 (320)
T ss_dssp HHHTTCEEECCCEEEEECSSSSEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHCCCEEEEeeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 8899999998888888753 333 567889999999999998765
No 131
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.43 E-value=6e-07 Score=82.11 Aligned_cols=91 Identities=19% Similarity=0.232 Sum_probs=72.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC----C-CC------------CCCC-----cHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA----N-EI------------LSSF-----DDRLRH 141 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~----~-~~------------l~~~-----~~~~~~ 141 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++ . .. .|.+ ..++..
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g--------------~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAE--------------LKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTD 74 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHH
Confidence 38999999999999999999876 78999987 1 21 1222 246777
Q ss_pred HHHHHHHhCCCEEEeCceEEEECC----eEEEcCCcEEecceEEEecCCCcc
Q 018671 142 YATTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 142 ~~~~~l~~~gV~v~~~~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+.+.+++.|++++.++|.+++.+ .|.+ +|+++.+|.+|+|+|..|.
T Consensus 75 ~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 75 KFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp HHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 788888899999998888888753 3555 7788999999999999875
No 132
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.41 E-value=6e-07 Score=86.07 Aligned_cols=94 Identities=26% Similarity=0.433 Sum_probs=66.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC-------CCC------cHHHHHHHHHHH-Hh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------SSF------DDRLRHYATTQL-SK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l-------~~~------~~~~~~~~~~~l-~~ 149 (352)
++|+|||||++|+.+|..|++.. ++.+|+++++.+.+ |.+ ...+.....+.+ ++
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~------------~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 71 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK------------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK 71 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSSCCC------------------------CTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHHhC------------cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh
Confidence 48999999999999999998863 12799999987422 111 111222222334 67
Q ss_pred CCCEEEeC-ceEEEECCe--EEEcCC-cEEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDSQK--LILNDG-TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~~~--v~~~~g-~~i~~D~vi~a~G~~~~ 189 (352)
.||+++.+ +|++++.+. +.++++ .++.+|.+|+|||.+|.
T Consensus 72 ~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~ 115 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ 115 (449)
T ss_dssp TTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC
T ss_pred cCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC
Confidence 89999999 899998764 445566 47999999999998776
No 133
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.41 E-value=1e-06 Score=86.10 Aligned_cols=92 Identities=15% Similarity=0.218 Sum_probs=74.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC---CCC------------CCCcHHHHHHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EIL------------SSFDDRLRHYATTQLS 148 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~---~~l------------~~~~~~~~~~~~~~l~ 148 (352)
.+|+|||||++|+.+|..+++.+ .+|++++.. ... ....+++...+.+.++
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~~G--------------~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSARKG--------------IRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred ccEEEECCcHHHHHHHHHHHhCC--------------CeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 47999999999999999999876 789999752 111 0123577888888899
Q ss_pred hCCCEEEeC-ceEEEECC-------eEEEcCCcEEecceEEEecCCCcc
Q 018671 149 KSGVRLVRG-IVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 149 ~~gV~v~~~-~V~~v~~~-------~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+.||+++.+ +|.+++.+ .|.+++|+++.+|.+|+|+|..|.
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 999999999 89999642 467788889999999999998765
No 134
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.37 E-value=2.1e-06 Score=81.08 Aligned_cols=90 Identities=18% Similarity=0.263 Sum_probs=69.2
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CC-----------------CC------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL-----------------SS------------ 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l-----------------~~------------ 134 (352)
.|+|||||++|+.+|..+++.+ .+|+++|+.+ +. ..
T Consensus 6 dViIIGgG~aGl~aA~~la~~G--------------~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLG--------------KSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhCC--------------CCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 7999999999999999999876 7888888753 20 00
Q ss_pred -----------------------------------CcHHHHHHHHHHHHhCCCEEEeC-ceEEEE-C-----Ce--EEEc
Q 018671 135 -----------------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVD-S-----QK--LILN 170 (352)
Q Consensus 135 -----------------------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~-~-----~~--v~~~ 170 (352)
....+.+.+.+.+++.||+++.+ +|+++. . +. |.++
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~ 151 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVN 151 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEET
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEEC
Confidence 12345566777788899999999 898886 2 33 4445
Q ss_pred CCcEEecceEEEecCCCcc
Q 018671 171 DGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 171 ~g~~i~~D~vi~a~G~~~~ 189 (352)
+| ++.+|.||+|+|..+.
T Consensus 152 ~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 152 ST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp TE-EEEESEEEECCCCSSC
T ss_pred CC-EEECCEEEECCCCccC
Confidence 55 7999999999999884
No 135
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.37 E-value=4.1e-06 Score=82.30 Aligned_cols=89 Identities=20% Similarity=0.212 Sum_probs=71.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC--------C-------------C-------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------S-------------S------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l--------~-------------~------- 134 (352)
.+|+|||||++|+.+|..|++.+ .+|+|+++. .+. | .
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~ 87 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQG--------------LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQ 87 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccccc
Confidence 48999999999999999998865 799999984 221 0 0
Q ss_pred ---------CcHHHHHHHHHHHHhCCC--EEEeC-ceEEEE--CC----eEEEcCCcEEecceEEEecCC
Q 018671 135 ---------FDDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 135 ---------~~~~~~~~~~~~l~~~gV--~v~~~-~V~~v~--~~----~v~~~~g~~i~~D~vi~a~G~ 186 (352)
..+++.+++.+..++.++ +++.+ +|++++ .+ .|.+++|+++.||.||+|+|.
T Consensus 88 ~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 88 EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 124677888888889998 78888 788874 34 678889999999999999994
No 136
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.35 E-value=2.5e-06 Score=77.40 Aligned_cols=91 Identities=21% Similarity=0.221 Sum_probs=70.3
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC----C--------CCC----cHHHHHHHHHHHH
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L--------SSF----DDRLRHYATTQLS 148 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~----l--------~~~----~~~~~~~~~~~l~ 148 (352)
.|+|||||++|+.+|..+++.+ .+|+|+|+..+ + |.+ .+++.........
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g--------------~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRAN--------------LKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 6899999999999999999877 89999997532 1 211 3567777777888
Q ss_pred hCCCEEEeC-ceEEEEC--CeEEEcCCcEEecceEEEecCCCcc
Q 018671 149 KSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 149 ~~gV~v~~~-~V~~v~~--~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+.++.+..+ .+..... ..+...+++++.+|.+|+|||.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~ 117 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYK 117 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEEC
T ss_pred hccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccC
Confidence 888888777 4444333 3566678889999999999998876
No 137
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.34 E-value=1.5e-06 Score=83.28 Aligned_cols=94 Identities=16% Similarity=0.261 Sum_probs=68.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCC----CCc----------HHHHHHHHHHHHh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----SFD----------DRLRHYATTQLSK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~----~~~----------~~~~~~~~~~l~~ 149 (352)
++|+|||||++|+.+|..|++.. ++.+|+++++.+..+ .+. ..+.....+.+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~------------~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY------------PQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRR 70 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------SSSEEEEECSSSCCSSCCC----------------CCCCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhC------------cCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHH
Confidence 38999999999999999998862 128999999864221 111 1111113466788
Q ss_pred CCCEEEeC-ceEEEECC--eEEE---cCCcEEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDSQ--KLIL---NDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~~--~v~~---~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+++++.+ +|++++.+ .+.+ .+++++.+|.+|+|||.+|.
T Consensus 71 ~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 71 QKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQF 116 (452)
T ss_dssp TTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBC
T ss_pred CCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccC
Confidence 99999888 89999875 4555 25568999999999999886
No 138
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.34 E-value=1.4e-06 Score=83.78 Aligned_cols=91 Identities=22% Similarity=0.418 Sum_probs=69.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCC------------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------ 133 (352)
.+|+|||||++|+.+|..+++.+ .+|+|+|+..+..
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 70 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFG--------------KRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFG 70 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcC
Confidence 38999999999999999999866 8999999864310
Q ss_pred ------CCc-H-----------HHHHHHHHHHHhCCCEEEeCceEEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 134 ------SFD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 134 ------~~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
..+ + .+...+.+.+++.||+++.+++..++...|.+ +|+++.+|.+|+|||.+|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~ 143 (463)
T 2r9z_A 71 VQASGGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPI 143 (463)
T ss_dssp BCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEEC
T ss_pred cccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCC
Confidence 000 0 11122334457789999999777788888888 7788999999999998876
No 139
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.32 E-value=3e-06 Score=81.63 Aligned_cols=92 Identities=20% Similarity=0.355 Sum_probs=68.2
Q ss_pred CcEEEECCChHHHHHHHHHHH---hHhhHHHhhcCCCCCccE---EEEEeCC-CCC------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSD---FIMRDVRQRYSHVKDYIH---VTLIEAN-EIL------------------------ 132 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~---~~~~~~~~~~~~~~~~~~---V~lv~~~-~~l------------------------ 132 (352)
++|+|||||++|+.+|..|++ .+ .+ |+++++. .+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G--------------~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~ 68 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKG--------------AEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYR 68 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTT--------------CCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcC--------------CCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCcccc
Confidence 389999999999999999987 44 56 9999875 321
Q ss_pred -------------CCC---------------cHHHHHHHHHHHHhCCCE--EEeC-ceEEEEC--C----eEEEcC---C
Q 018671 133 -------------SSF---------------DDRLRHYATTQLSKSGVR--LVRG-IVKDVDS--Q----KLILND---G 172 (352)
Q Consensus 133 -------------~~~---------------~~~~~~~~~~~l~~~gV~--v~~~-~V~~v~~--~----~v~~~~---g 172 (352)
+.+ ...+.+++.+.+++.|++ ++.+ +|++++. + .|.+.+ |
T Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g 148 (464)
T 2xve_A 69 YLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD 148 (464)
T ss_dssp TCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT
T ss_pred chhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC
Confidence 000 135566777777888998 8877 7888863 3 566654 4
Q ss_pred --cEEecceEEEecC--CCcc
Q 018671 173 --TEVPYGLLVWSTG--VGPS 189 (352)
Q Consensus 173 --~~i~~D~vi~a~G--~~~~ 189 (352)
.++.+|.||+|+| ..|.
T Consensus 149 ~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 149 TIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEEEEESEEEECCCSSSSBC
T ss_pred ceEEEEcCEEEECCCCCCCCc
Confidence 5789999999999 5554
No 140
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.32 E-value=1.5e-06 Score=83.44 Aligned_cols=91 Identities=24% Similarity=0.459 Sum_probs=69.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC----------------------------C
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------F 135 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----------------------------~ 135 (352)
.+|+|||||++|+.+|..+++.+ .+|+|+|+.++... +
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~ 70 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYG--------------QKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDY 70 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhc
Confidence 38999999999999999998865 89999998643110 0
Q ss_pred ---------c-H-----------HHHHHHHHHHHhCCCEEEeCceEEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 136 ---------D-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 136 ---------~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+ + .+...+.+.+++.+|+++.+++..+++..|.+ +|+++.+|.+|+|||.+|.
T Consensus 71 g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~ 144 (450)
T 1ges_A 71 GFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPS 144 (450)
T ss_dssp TEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEEC
T ss_pred CccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCC
Confidence 0 0 11112234457789999999777788888888 7788999999999998876
No 141
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.31 E-value=1.9e-06 Score=83.41 Aligned_cols=92 Identities=23% Similarity=0.291 Sum_probs=73.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC-----------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----------------------------- 134 (352)
..|+|||||++|+.+|..|++.+ .+|+|+|+..+...
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g 92 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALG--------------KRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFG 92 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHhCc--------------CEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCC
Confidence 37999999999999999999887 89999998532110
Q ss_pred -------Cc------------HHHHHHHHHHHHhCCCEEEeCceEEEECCeEEEc-CCcEEecceEEEecCCCcc
Q 018671 135 -------FD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-DGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 -------~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~-~g~~i~~D~vi~a~G~~~~ 189 (352)
++ ..+...+.+.+++.+|+++.+.+..+++..+.+. +++++.+|.+|+|+|..|.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 93 WKYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp BCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEEC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcc
Confidence 00 1223334556778899999998888899999987 7889999999999998776
No 142
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.30 E-value=4.4e-06 Score=80.28 Aligned_cols=91 Identities=22% Similarity=0.366 Sum_probs=68.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC---------C---------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S--------------------- 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---------~--------------------- 133 (352)
.+|+|||||++|+.+|..+++.+ .+|+++++..+. |
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~ 71 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQLG--------------IPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPS 71 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CEEEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhccccc
Confidence 48999999999999999998876 899999985321 0
Q ss_pred --CC-------c-HHH-----------HHHHHHHHHhCCCEEEeCceEEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 134 --SF-------D-DRL-----------RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 134 --~~-------~-~~~-----------~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+ + +.+ .....+.+++.||+++.++...+++..|.+++ +++.+|.+|+|||.+|.
T Consensus 72 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~ 147 (458)
T 1lvl_A 72 PLGISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSV 147 (458)
T ss_dssp TTCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEEC
T ss_pred ccCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCC
Confidence 00 1 111 11133566788999999865557788888876 78999999999999875
No 143
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.30 E-value=2.5e-06 Score=81.50 Aligned_cols=93 Identities=15% Similarity=0.188 Sum_probs=66.2
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHH---------------HHHHHHHHHh
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL---------------RHYATTQLSK 149 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~---------------~~~~~~~l~~ 149 (352)
+|+|||||+.|+.+|..|++++ .+.+|+|+++++..+.....+ .....+.+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g------------~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLD------------KESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDR 69 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHC------------SSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCC------------CCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHh
Confidence 7999999999999999998765 237899999864222111001 0112345667
Q ss_pred CCCEEEeC-ceEEEECC--eEEEcC-----CcEEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDSQ--KLILND-----GTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~~--~v~~~~-----g~~i~~D~vi~a~G~~~~ 189 (352)
.+|+++.+ +|++++.+ .+.+.+ +.++.||.+|+|||.+|+
T Consensus 70 ~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 70 KQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp HCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred cCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccc
Confidence 89999998 89999875 344322 246899999999999876
No 144
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.29 E-value=2.8e-06 Score=83.30 Aligned_cols=89 Identities=13% Similarity=0.184 Sum_probs=70.9
Q ss_pred CcEEEECCChHHHHHHHHHH-HhHhhHHHhhcCCCCCccEEEEEeCC-CCC--------CCC------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELS-DFIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------SSF------------------ 135 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~-~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l--------~~~------------------ 135 (352)
.+|+|||||++|+.+|..|+ +.+ .+|+|+++. .+. |..
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G--------------~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~ 74 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELG--------------LTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLL 74 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC--------------CCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCC--------------CCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccc
Confidence 38999999999999999998 654 799999985 221 110
Q ss_pred -----------cHHHHHHHHHHHHhCCC--EEEeC-ceEEEE--CC----eEEEcCCcEEecceEEEecCC
Q 018671 136 -----------DDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 136 -----------~~~~~~~~~~~l~~~gV--~v~~~-~V~~v~--~~----~v~~~~g~~i~~D~vi~a~G~ 186 (352)
.+++.+++.+..++.|+ +++.+ +|++++ ++ .|.+++|+++.||.||+|+|.
T Consensus 75 ~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 75 QESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 24677788888888998 78888 788775 33 577889999999999999995
No 145
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.29 E-value=3e-06 Score=79.65 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=69.6
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC--------------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------------------------------- 132 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l-------------------------------- 132 (352)
+|+|||||++|+.+|..|++.+ .+|+|+|+....
T Consensus 8 dVvIVGaG~aGl~~A~~L~~~G--------------~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~ 73 (399)
T 2x3n_A 8 DVLINGCGIGGAMLAYLLGRQG--------------HRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGR 73 (399)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCE
T ss_pred CEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCC
Confidence 7999999999999999999876 566666653110
Q ss_pred ------------------------C-----CCcHHHHHHHHHHHHhC-CCEEEeC-ceEEEECC------eEEEcCCcEE
Q 018671 133 ------------------------S-----SFDDRLRHYATTQLSKS-GVRLVRG-IVKDVDSQ------KLILNDGTEV 175 (352)
Q Consensus 133 ------------------------~-----~~~~~~~~~~~~~l~~~-gV~v~~~-~V~~v~~~------~v~~~~g~~i 175 (352)
+ -....+.+.+.+.+++. |++++.+ +|++++.+ .|.+++|+++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~ 153 (399)
T 2x3n_A 74 VRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVL 153 (399)
T ss_dssp EECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEE
Confidence 0 01134556667777777 9999998 89888643 5667889899
Q ss_pred ecceEEEecCCCcc
Q 018671 176 PYGLLVWSTGVGPS 189 (352)
Q Consensus 176 ~~D~vi~a~G~~~~ 189 (352)
.+|.||.|.|....
T Consensus 154 ~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 154 RPRVVVGADGIASY 167 (399)
T ss_dssp EEEEEEECCCTTCH
T ss_pred ECCEEEECCCCChH
Confidence 99999999998876
No 146
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.28 E-value=8e-07 Score=86.30 Aligned_cols=94 Identities=21% Similarity=0.361 Sum_probs=67.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHH--------HH-----------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHY--------AT----------- 144 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~--------~~----------- 144 (352)
.+|+|||||++|+.+|..|++.. .+.+|+||++.+.++...+.+++. ..
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~~------------~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~ 79 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRARD------------PGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGK 79 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHS------------TTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSC
T ss_pred CCEEEECChHHHHHHHHHHHhcC------------CCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccc
Confidence 47999999999999999997752 128999999874332111000000 00
Q ss_pred ---------------HH---HHhCCCEEEeC-ceEEEEC--CeEEEcCCcEEecceEEEecCCCcc
Q 018671 145 ---------------TQ---LSKSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 145 ---------------~~---l~~~gV~v~~~-~V~~v~~--~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+. +.+.||+++.+ +|.+++. ..|.+++|+++.||.+|+|||.+|.
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 80 ERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPR 145 (493)
T ss_dssp EEESBSSCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEEC
T ss_pred cccccccchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCC
Confidence 00 12468999998 8999885 4788999999999999999999876
No 147
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.28 E-value=1.8e-06 Score=83.25 Aligned_cols=94 Identities=18% Similarity=0.248 Sum_probs=60.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC-------CCC-------cHHH-------HHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------SSF-------DDRL-------RHY 142 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l-------~~~-------~~~~-------~~~ 142 (352)
++|+|||||++|+.+|..|++.. ++.+|+++++.+.+ |.+ ...+ ...
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~------------~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~ 71 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLD------------PEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRD 71 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHC------------TTSEEEEECCC----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhC------------cCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccC
Confidence 48999999999999999998862 12899999987321 111 0111 112
Q ss_pred HHHHHHhCCCEEEeC-ceEEEECC--eEEEcC---Cc--EEecceEEEecCCCcc
Q 018671 143 ATTQLSKSGVRLVRG-IVKDVDSQ--KLILND---GT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 143 ~~~~l~~~gV~v~~~-~V~~v~~~--~v~~~~---g~--~i~~D~vi~a~G~~~~ 189 (352)
.....++.+++++.+ +|++++.+ .+.+.+ |+ ++.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 126 (472)
T 3iwa_A 72 PEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN 126 (472)
T ss_dssp ---------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC
Confidence 222223579999888 89999865 566554 65 7999999999998776
No 148
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.28 E-value=3.6e-06 Score=80.65 Aligned_cols=93 Identities=24% Similarity=0.254 Sum_probs=68.7
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCC----------------cHHHHHHHHHHHH
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF----------------DDRLRHYATTQLS 148 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~----------------~~~~~~~~~~~l~ 148 (352)
+|+|||||++|+.+|..|++.. ++.+|+++++....+.. ...+.....+.++
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~------------~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 69 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH------------PDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELS 69 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC------------TTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhhC------------cCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHH
Confidence 6999999999999999999862 12899999987422111 1112122345677
Q ss_pred hCCCEEEeC-ceEEEEC--CeEEEcC-----CcEEecceEEEecCCCcc
Q 018671 149 KSGVRLVRG-IVKDVDS--QKLILND-----GTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 149 ~~gV~v~~~-~V~~v~~--~~v~~~~-----g~~i~~D~vi~a~G~~~~ 189 (352)
+.||+++.+ ++..++. +.+.+.+ ++++.+|.+|+|+|.+|.
T Consensus 70 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 70 NLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp HTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC
Confidence 889999888 7988874 5677653 467999999999998776
No 149
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.27 E-value=2.1e-06 Score=82.46 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=68.6
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CC-------C------------------C----
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL-------S------------------S---- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l-------~------------------~---- 134 (352)
.|+|||||++|+.+|..|++.+... .+ .+|+++|+.. +. + .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~--------~~-~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~ 102 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQ--------GA-LEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYS 102 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHH--------CC-CCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTS
T ss_pred CEEEECCCHHHHHHHHHHHhccccc--------Cc-ccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCC
Confidence 7999999999999999999875210 00 5899998753 11 0 0
Q ss_pred ----------------------CcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC---------eEEEcCCc----EEecc
Q 018671 135 ----------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---------KLILNDGT----EVPYG 178 (352)
Q Consensus 135 ----------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~---------~v~~~~g~----~i~~D 178 (352)
...++.+++....++.+++++.+ +|++++.+ .|.+.+|+ ++.||
T Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d 182 (463)
T 3s5w_A 103 FVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR 182 (463)
T ss_dssp HHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES
T ss_pred hhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC
Confidence 01334455555566778999998 78888653 45566665 89999
Q ss_pred eEEEecCCCcc
Q 018671 179 LLVWSTGVGPS 189 (352)
Q Consensus 179 ~vi~a~G~~~~ 189 (352)
.||+|+|..|.
T Consensus 183 ~lVlAtG~~p~ 193 (463)
T 3s5w_A 183 ALVVSPGGTPR 193 (463)
T ss_dssp EEEECCCCEEC
T ss_pred EEEECCCCCCC
Confidence 99999999765
No 150
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.27 E-value=1.5e-06 Score=83.26 Aligned_cols=93 Identities=19% Similarity=0.352 Sum_probs=68.5
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCc--------------HHHHHHHHHHHHhC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD--------------DRLRHYATTQLSKS 150 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~--------------~~~~~~~~~~l~~~ 150 (352)
+|+|||||++|+.+|..|++.. ++.+|+++++.+.++..+ .++.....+.+++.
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~------------~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH------------PDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESR 69 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC------------TTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHT
T ss_pred eEEEECCCHHHHHHHHHHHHhC------------cCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHC
Confidence 7999999999999999998862 128999999874322111 11222234667788
Q ss_pred CCEEEeC-ceEEEEC--CeEEEcC---Cc--EEecceEEEecCCCcc
Q 018671 151 GVRLVRG-IVKDVDS--QKLILND---GT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 151 gV~v~~~-~V~~v~~--~~v~~~~---g~--~i~~D~vi~a~G~~~~ 189 (352)
||+++.+ ++..++. +.|.+.+ |+ ++.+|.+|+|||.+|.
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF 116 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC
Confidence 9999888 7888865 4677653 65 4899999999998876
No 151
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.26 E-value=9.2e-07 Score=86.00 Aligned_cols=91 Identities=22% Similarity=0.370 Sum_probs=58.5
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC---------C----------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S---------------------- 133 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---------~---------------------- 133 (352)
+|+|||||++|+.+|..+++.+ .+|+|+|+..+. |
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~ 69 (500)
T 1onf_A 4 DLIVIGGGSGGMAAARRAARHN--------------AKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGF 69 (500)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTC
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCC
Confidence 7999999999999999999876 899999987431 0
Q ss_pred ----CCc------------HHHHHHHHHHHHhCCCEEEeCceEEEECCeEEEcC-------------CcEEecceEEEec
Q 018671 134 ----SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILND-------------GTEVPYGLLVWST 184 (352)
Q Consensus 134 ----~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~-------------g~~i~~D~vi~a~ 184 (352)
.++ ..+...+.+.+++.||+++.+.+..+++..+.+.+ ++++.+|.+|+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAt 149 (500)
T 1onf_A 70 DTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAV 149 (500)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECC
T ss_pred ccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECC
Confidence 000 11112233556778999998855555666666644 6689999999999
Q ss_pred CCCcc
Q 018671 185 GVGPS 189 (352)
Q Consensus 185 G~~~~ 189 (352)
|.+|.
T Consensus 150 Gs~p~ 154 (500)
T 1onf_A 150 GNKPV 154 (500)
T ss_dssp CCCBC
T ss_pred CCCCC
Confidence 99886
No 152
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.26 E-value=1.9e-05 Score=72.54 Aligned_cols=159 Identities=15% Similarity=0.161 Sum_probs=99.5
Q ss_pred CcEEEECCChHHHHHHHHHHHh--HhhHHHhhcCCCCCccEEEEEeCCC-CCC---------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEANE-ILS--------------------------- 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~--~~~~~~~~~~~~~~~~~V~lv~~~~-~l~--------------------------- 133 (352)
..|+|||||++|+.+|..|++. + .+|+|+++.. ...
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G--------------~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv 145 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPD--------------LRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGV 145 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTT--------------SCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCC--------------CEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCC
Confidence 3899999999999999999986 4 7899998752 210
Q ss_pred -----------CCcHHHHHHHHHHHHh-CCCEEEeC-ceEEEEC-------------------C-----eEEE------c
Q 018671 134 -----------SFDDRLRHYATTQLSK-SGVRLVRG-IVKDVDS-------------------Q-----KLIL------N 170 (352)
Q Consensus 134 -----------~~~~~~~~~~~~~l~~-~gV~v~~~-~V~~v~~-------------------~-----~v~~------~ 170 (352)
....++.+.+.+.+.+ .||+++.+ ++.++.. + +|.. .
T Consensus 146 ~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~ 225 (344)
T 3jsk_A 146 PYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSM 225 (344)
T ss_dssp CCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHT
T ss_pred cccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeec
Confidence 0012334555566666 59999988 6766631 1 2222 1
Q ss_pred --------CCcEEecceEEEecCCCcc--h-h---hhhcCCCCCCCCc----------cccCCccccCCCCCEEEEcccc
Q 018671 171 --------DGTEVPYGLLVWSTGVGPS--T-L---VKSLDLPKSPGGR----------IGIDEWLRVPSVQDVFAVGDCS 226 (352)
Q Consensus 171 --------~g~~i~~D~vi~a~G~~~~--~-~---~~~~~l~~~~~G~----------i~Vd~~l~~~~~~~IfaiGD~a 226 (352)
+..++.++.||.|+|.... . + +...++...-.|. ..|+.+-++ +|++|+.|-.+
T Consensus 226 ~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~ 303 (344)
T 3jsk_A 226 HHDDQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMEL 303 (344)
T ss_dssp TSSSSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGH
T ss_pred cCCcccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhh
Confidence 2247999999999998765 1 2 2233432100111 222223333 79999999877
Q ss_pred ccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 227 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 227 ~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+-.. |.+.+-++.-.-...|+.+|+.|...++
T Consensus 304 ~~~~--g~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 304 SEID--GANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp HHHH--TCEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred Hhhc--CCCCCCcccceeeecCHHHHHHHHHHHH
Confidence 5322 3333444444556789999988877665
No 153
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.26 E-value=3.4e-06 Score=83.14 Aligned_cols=94 Identities=16% Similarity=0.244 Sum_probs=67.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcH---------------HHHHHHHHHHH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDD---------------RLRHYATTQLS 148 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~---------------~~~~~~~~~l~ 148 (352)
++|+|||||++|+.+|..|++.. ++.+|+++++.+..+.... .+........+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~------------~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 69 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS------------ETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKA 69 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------SSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhC------------cCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHH
Confidence 48999999999999999998763 2389999998743221110 01112233344
Q ss_pred hCCCEEEeC-ceEEEECC--eEEEcC---Cc--EEecceEEEecCCCcc
Q 018671 149 KSGVRLVRG-IVKDVDSQ--KLILND---GT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 149 ~~gV~v~~~-~V~~v~~~--~v~~~~---g~--~i~~D~vi~a~G~~~~ 189 (352)
+.+|+++.+ +|++++.+ .+.+.+ |+ ++.+|.+|+|||.+|.
T Consensus 70 ~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 118 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPI 118 (565)
T ss_dssp HHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred hcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCC
Confidence 579999988 89999865 555543 54 7899999999999876
No 154
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.25 E-value=8.7e-07 Score=85.13 Aligned_cols=89 Identities=19% Similarity=0.202 Sum_probs=68.8
Q ss_pred ccCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CC-------CCC--CcHHHHHHHHHHHHhC
Q 018671 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-------LSS--FDDRLRHYATTQLSKS 150 (352)
Q Consensus 81 ~~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~-------l~~--~~~~~~~~~~~~l~~~ 150 (352)
+..++|+|||||++|+.+|..|++.+ .+|+++++. .+ +|. ++.++.....+.+++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G--------------~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~ 185 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKG--------------YEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADA 185 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHC
Confidence 34578999999999999999999876 799999986 33 233 3567777888889999
Q ss_pred CCEEEeC-ceEEEECCeEEEcCCcEEecceEEEecCCCc
Q 018671 151 GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 151 gV~v~~~-~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
||+++.+ .|. ..+.++++ .+.+|.||+|+|..+
T Consensus 186 gv~~~~~~~v~----~~v~~~~~-~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 186 GVIYHPNFEVG----RDASLPEL-RRKHVAVLVATGVYK 219 (456)
T ss_dssp TCEEETTCCBT----TTBCHHHH-HSSCSEEEECCCCCE
T ss_pred CcEEEeCCEec----cEEEhhHh-HhhCCEEEEecCCCC
Confidence 9999988 442 23333333 267999999999974
No 155
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.25 E-value=2.5e-06 Score=81.62 Aligned_cols=89 Identities=17% Similarity=0.221 Sum_probs=66.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc--EEEEEeCC-CCC-----CC---------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN-EIL-----SS--------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~--~V~lv~~~-~~l-----~~--------------------- 134 (352)
.+|+|||||++|+.+|..|++.+ . +|+++|+. .+. ..
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~G--------------~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~ 72 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAEK--------------AFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIV 72 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT--------------CCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBC
T ss_pred CEEEEECccHHHHHHHHHHHhcC--------------CCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccc
Confidence 58999999999999999999876 5 89999875 220 00
Q ss_pred --------------------------C--------------cHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--C--eEEE
Q 018671 135 --------------------------F--------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLIL 169 (352)
Q Consensus 135 --------------------------~--------------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~ 169 (352)
+ ...+.+++.+..++.++.++.+ +|++++. + .|++
T Consensus 73 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~ 152 (447)
T 2gv8_A 73 GPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTY 152 (447)
T ss_dssp CSSSCCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEE
T ss_pred cccccCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEE
Confidence 0 1245566666677777788888 7888864 3 4666
Q ss_pred cC---Cc---EEecceEEEecCC
Q 018671 170 ND---GT---EVPYGLLVWSTGV 186 (352)
Q Consensus 170 ~~---g~---~i~~D~vi~a~G~ 186 (352)
.+ |+ ++.+|.||+|+|.
T Consensus 153 ~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 153 KGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp EESSTTCCEEEEEESEEEECCCS
T ss_pred eecCCCCeeEEEEeCEEEECCCC
Confidence 55 66 7999999999999
No 156
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.25 E-value=9.4e-07 Score=85.96 Aligned_cols=93 Identities=15% Similarity=0.297 Sum_probs=64.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC---CCC--------CcH-HHHHHHHHHH--Hh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---LSS--------FDD-RLRHYATTQL--SK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~---l~~--------~~~-~~~~~~~~~l--~~ 149 (352)
++|||||||+.|+.+|..|+.. +.+||||++.+. .|. +++ .+...+.+.+ ++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~--------------~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~ 108 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTK--------------KYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKK 108 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTT--------------TCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCS
T ss_pred CCEEEECCcHHHHHHHHHhhhC--------------CCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhc
Confidence 5899999999999999887543 289999998631 121 111 1111223332 23
Q ss_pred CCCEEEeCceEEEECC--eEEE--------------------cCCcEEecceEEEecCCCcch
Q 018671 150 SGVRLVRGIVKDVDSQ--KLIL--------------------NDGTEVPYGLLVWSTGVGPST 190 (352)
Q Consensus 150 ~gV~v~~~~V~~v~~~--~v~~--------------------~~g~~i~~D~vi~a~G~~~~~ 190 (352)
.+++++.++|++|+.+ .|.+ .++.+++||.+|+|+|.+|+.
T Consensus 109 ~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~ 171 (502)
T 4g6h_A 109 GNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT 171 (502)
T ss_dssp SCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC
T ss_pred CCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc
Confidence 4788888889999864 4544 246789999999999998874
No 157
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.25 E-value=1.5e-05 Score=74.07 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=31.6
Q ss_pred CCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 216 VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 216 ~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.++++.+||++...+|.. ..-...|+..|..+|+.|...+.
T Consensus 276 ~~~v~lvGDAA~~~~P~~----G~Gi~~A~~~g~~~A~~i~~~l~ 316 (397)
T 3oz2_A 276 MPGLMLVGDAARLIDPIT----GGGIANAIVSGMYAAQVTKEAIE 316 (397)
T ss_dssp ETTEEECGGGGTCSCTTT----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEcccccccCCCCc----chhHHHHHHHHHHHHHHHHHHHH
Confidence 368999999998766433 23356899999999999887665
No 158
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.24 E-value=9.2e-06 Score=77.76 Aligned_cols=91 Identities=20% Similarity=0.311 Sum_probs=69.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CCC-------------------C---------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-------------------S--------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~-------------------~--------- 134 (352)
..|+|||||++|+.+|..|++.+ .+|+|+|+.. ... .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G--------------~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~ 92 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEG--------------ANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNG 92 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTG
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccCh
Confidence 37999999999999999999876 7888888752 210 0
Q ss_pred ---------------------------------------CcHHHHHHHHHHHHhCCCEEEeC-ceEEEE--CC---eEEE
Q 018671 135 ---------------------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVD--SQ---KLIL 169 (352)
Q Consensus 135 ---------------------------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~--~~---~v~~ 169 (352)
....+.+.+.+.+++.||+++.+ +|+++. ++ .|.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~ 172 (447)
T 2i0z_A 93 RFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVIL 172 (447)
T ss_dssp GGGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEE
Confidence 01234455666777889999998 788885 34 3667
Q ss_pred cCCcEEecceEEEecCCCc
Q 018671 170 NDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 170 ~~g~~i~~D~vi~a~G~~~ 188 (352)
.+|+++.+|.||+|+|..+
T Consensus 173 ~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 173 QTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TTCCEEECSCEEECCCCSS
T ss_pred CCCCEEECCEEEECCCCCc
Confidence 7888899999999999887
No 159
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.24 E-value=5.1e-06 Score=79.95 Aligned_cols=91 Identities=26% Similarity=0.396 Sum_probs=68.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC-----------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----------------------------- 134 (352)
.+|+|||||++|+.+|..+++.+ .+|+|+++..+...
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g--------------~~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g 72 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLG--------------LKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFG 72 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcC
Confidence 37999999999999999998876 89999998652100
Q ss_pred ------Cc-HHH-----------HHHHHHHHHhCCCEEEeCceEEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 135 ------FD-DRL-----------RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 ------~~-~~~-----------~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+ +.+ .....+.+++.||+++.++...+++..+.+. |+++.+|.+|+|||.+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~p~ 144 (464)
T 2eq6_A 73 LKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSEPL 144 (464)
T ss_dssp EECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEEEC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCCCC
Confidence 00 001 0112345677899999986556788888887 778999999999999876
No 160
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.24 E-value=3.7e-06 Score=82.54 Aligned_cols=92 Identities=21% Similarity=0.243 Sum_probs=71.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC--------C---------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------S--------------------- 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l--------~--------------------- 133 (352)
.+|+|||||++|+.+|..|++.+ .+|+|+++. .+. |
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g--------------~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~ 75 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAG--------------MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIP 75 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSST
T ss_pred CCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCccccc
Confidence 37999999999999999998765 789999986 321 1
Q ss_pred --------CCcHHHHHHHHHHHHhCCC--EEEeC-ceEEEEC--C----eEEEcCCcEEecceEEEecCC--Ccc
Q 018671 134 --------SFDDRLRHYATTQLSKSGV--RLVRG-IVKDVDS--Q----KLILNDGTEVPYGLLVWSTGV--GPS 189 (352)
Q Consensus 134 --------~~~~~~~~~~~~~l~~~gV--~v~~~-~V~~v~~--~----~v~~~~g~~i~~D~vi~a~G~--~~~ 189 (352)
.-.+++..++.+..++.++ +++.+ +|++++. + .|.+++|+++.||.||+|+|. .|.
T Consensus 76 ~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 76 EWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp TCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred CCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 0135777888888888887 67777 7888753 3 678889999999999999994 444
No 161
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.23 E-value=1.8e-06 Score=83.02 Aligned_cols=91 Identities=23% Similarity=0.301 Sum_probs=70.8
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCC-------------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 133 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------- 133 (352)
.|+|||||++|+.+|..|++.+ .+|+++|+..+..
T Consensus 7 DVvVIGaG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~ 72 (463)
T 4dna_A 7 DLFVIGGGSGGVRSGRLAAALG--------------KKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGW 72 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred cEEEECcCHHHHHHHHHHHhCC--------------CEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 7999999999999999999876 8999999843211
Q ss_pred -----CCc------------HHHHHHHHHHHHhCCCEEEeCceEEEECCeEEE-cCCcEEecceEEEecCCCcc
Q 018671 134 -----SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL-NDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 134 -----~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~-~~g~~i~~D~vi~a~G~~~~ 189 (352)
.++ ..+...+.+.+++.+|+++.+++..+++..+.+ .+++++.+|.+|+|+|.+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 73 TVGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp EECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEEC
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcc
Confidence 000 122233445567789999999888888888888 57889999999999998776
No 162
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.21 E-value=6.4e-06 Score=79.25 Aligned_cols=92 Identities=26% Similarity=0.321 Sum_probs=67.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC---------------------------CCCC-
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---------------------------LSSF- 135 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~---------------------------l~~~- 135 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++..+ .|.+
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~ 70 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVEQG--------------AQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDG 70 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcC
Confidence 48999999999999999999876 89999997632 1111
Q ss_pred ---------c-HHHHH-------H-----HHHHHHhC-CCEEEeCceEEEECCeEE--EcCC--cEEecceEEEecCCCc
Q 018671 136 ---------D-DRLRH-------Y-----ATTQLSKS-GVRLVRGIVKDVDSQKLI--LNDG--TEVPYGLLVWSTGVGP 188 (352)
Q Consensus 136 ---------~-~~~~~-------~-----~~~~l~~~-gV~v~~~~V~~v~~~~v~--~~~g--~~i~~D~vi~a~G~~~ 188 (352)
+ ..+.. . ..+.+++. ||+++.+++..++.+.+. +.+| +++.+|.+|+|||.+|
T Consensus 71 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 150 (467)
T 1zk7_A 71 GIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASP 150 (467)
T ss_dssp TSCCCCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEE
T ss_pred CccCCCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCC
Confidence 1 11111 1 12445666 999998888888887654 4577 6799999999999877
Q ss_pred c
Q 018671 189 S 189 (352)
Q Consensus 189 ~ 189 (352)
.
T Consensus 151 ~ 151 (467)
T 1zk7_A 151 A 151 (467)
T ss_dssp C
T ss_pred C
Confidence 6
No 163
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.21 E-value=7.5e-06 Score=81.16 Aligned_cols=96 Identities=18% Similarity=0.259 Sum_probs=70.7
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCc---------------HHHHHHHHHH
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD---------------DRLRHYATTQ 146 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~---------------~~~~~~~~~~ 146 (352)
..++|+|||||++|+.+|..|++.. ++.+|+++++.+..+..+ ..+...+...
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~------------~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~ 102 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLS------------EEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERM 102 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC------------SSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHH
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhC------------cCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHH
Confidence 3468999999999999999998862 228999999874321110 1122344555
Q ss_pred HHhCCCEEEeC-ceEEEECC--eEEEc---CCc--EEecceEEEecCCCcc
Q 018671 147 LSKSGVRLVRG-IVKDVDSQ--KLILN---DGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 147 l~~~gV~v~~~-~V~~v~~~--~v~~~---~g~--~i~~D~vi~a~G~~~~ 189 (352)
.++.+++++.+ +|.+++.+ .+.+. +|+ ++.+|.+|+|||.+|.
T Consensus 103 ~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (588)
T 3ics_A 103 SKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPI 153 (588)
T ss_dssp HHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCC
Confidence 67889999988 89999865 55553 565 7899999999998776
No 164
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.20 E-value=4.1e-06 Score=81.21 Aligned_cols=91 Identities=15% Similarity=0.279 Sum_probs=68.6
Q ss_pred cEEEECCChHHHHHHHHHHH-hHhhHHHhhcCCCCCccEEEEEe---------CCCCCCC--------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIE---------ANEILSS-------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~-~~~~~~~~~~~~~~~~~~V~lv~---------~~~~l~~-------------------- 134 (352)
.|+|||||+.|+.+|..+++ .+ .+|+|+| ...+...
T Consensus 5 dvvVIGgG~aGl~aA~~la~~~G--------------~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~ 70 (490)
T 1fec_A 5 DLVVIGAGSGGLEAGWNAASLHK--------------KRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMD 70 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHC--------------CCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHHcC--------------CEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHH
Confidence 79999999999999999998 66 8999999 3332110
Q ss_pred ------------------Cc-HH-----------HHHHHHHHHHhC-CCEEEeCceEEEECCeEEEc-----CC---cEE
Q 018671 135 ------------------FD-DR-----------LRHYATTQLSKS-GVRLVRGIVKDVDSQKLILN-----DG---TEV 175 (352)
Q Consensus 135 ------------------~~-~~-----------~~~~~~~~l~~~-gV~v~~~~V~~v~~~~v~~~-----~g---~~i 175 (352)
++ +. +...+.+.+++. ||+++.+++..+++..+.+. +| +++
T Consensus 71 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~ 150 (490)
T 1fec_A 71 TIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETL 150 (490)
T ss_dssp HHHHGGGGTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEE
T ss_pred HHHHHHhcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEE
Confidence 00 01 112233446677 99999998888888888874 67 689
Q ss_pred ecceEEEecCCCcc
Q 018671 176 PYGLLVWSTGVGPS 189 (352)
Q Consensus 176 ~~D~vi~a~G~~~~ 189 (352)
.+|.+|+|||.+|.
T Consensus 151 ~~d~lviAtGs~p~ 164 (490)
T 1fec_A 151 DTEYILLATGSWPQ 164 (490)
T ss_dssp EEEEEEECCCEEEC
T ss_pred EcCEEEEeCCCCCC
Confidence 99999999998876
No 165
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.20 E-value=7.4e-06 Score=79.14 Aligned_cols=94 Identities=23% Similarity=0.345 Sum_probs=67.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCC--------------cHHHHHHHHHHHH-
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQLS- 148 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~--------------~~~~~~~~~~~l~- 148 (352)
.+|+|||||++|+.+|..|++.. .+.+|+++++....+.. ..++.....+.+.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~------------~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 104 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND------------ENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRD 104 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhC------------cCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHh
Confidence 58999999999999999998762 12899999987432111 1111112234454
Q ss_pred hCCCEEEeC-ceEEEEC--CeEEEc---CCc--EEecceEEEecCCCcc
Q 018671 149 KSGVRLVRG-IVKDVDS--QKLILN---DGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 149 ~~gV~v~~~-~V~~v~~--~~v~~~---~g~--~i~~D~vi~a~G~~~~ 189 (352)
+.||+++.+ +|..++. +.+.+. +|+ ++.+|.+|+|+|.+|.
T Consensus 105 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp TTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred hcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 459999998 8999875 466664 376 7999999999998876
No 166
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=9.3e-06 Score=78.14 Aligned_cols=92 Identities=24% Similarity=0.290 Sum_probs=67.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCCC---------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSF--------------------------- 135 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~--------------------------- 135 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++. .+....
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g--------------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~ 72 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLG--------------FKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFAN 72 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999876 899999987 331110
Q ss_pred ----------c-HH-----------HHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCC--cEEecceEEEecCCCcc
Q 018671 136 ----------D-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 136 ----------~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~D~vi~a~G~~~~ 189 (352)
+ +. +...+.+.+++.||+++.+....++++.+.+ ++| +++.+|.+|+|+|.+|.
T Consensus 73 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~ 152 (470)
T 1dxl_A 73 HGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVK 152 (470)
T ss_dssp HTEEESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEEC
T ss_pred cCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 0 00 1112344566789999998544577776655 466 68999999999999876
No 167
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.18 E-value=6.9e-06 Score=76.47 Aligned_cols=59 Identities=17% Similarity=0.119 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecCCCcchhhhhcC
Q 018671 137 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 137 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~ 196 (352)
..+.+.+.+.+++.|++++.+ +|++++.+ .|.+++| ++.+|.||+|+|.....+...++
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~ 227 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLG 227 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcC
Confidence 345666777788899999998 79888653 2555666 89999999999987665655544
No 168
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.18 E-value=3.2e-06 Score=81.43 Aligned_cols=91 Identities=20% Similarity=0.308 Sum_probs=68.3
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC-----------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS----------------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~----------------------------- 134 (352)
.|+|||||++|+.+|..|++.+ .+|+|+|+. .+...
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G--------------~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~ 71 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAK--------------YNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVK 71 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCC
Confidence 7999999999999999999876 899999965 33110
Q ss_pred --Cc-HH----------HH--HHHHHHHHhCCCEEEeCceEEEECCeE--EEcCCcE--EecceEEEecCCCcc
Q 018671 135 --FD-DR----------LR--HYATTQLSKSGVRLVRGIVKDVDSQKL--ILNDGTE--VPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 --~~-~~----------~~--~~~~~~l~~~gV~v~~~~V~~v~~~~v--~~~~g~~--i~~D~vi~a~G~~~~ 189 (352)
++ +. +. ..+.+.+++.+|+++.+++..++++.+ ...+|++ +.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~ 145 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA 145 (466)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred CCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc
Confidence 00 00 01 334445566799999888888888854 4567778 999999999998776
No 169
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.17 E-value=6.8e-07 Score=81.91 Aligned_cols=54 Identities=9% Similarity=-0.015 Sum_probs=37.2
Q ss_pred ccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 204 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 204 ~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.+.+|+.+++ +.|+|||+||++...++. ...-++...++.+|+.+|+.|...+.
T Consensus 272 ~iv~~~~~~t-~vpGv~aaGDaa~~v~g~--~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 272 DVVIHSGAYA-GVDNMYFAGMEVAELDGL--NRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHHCEECT-TSBTEEECTHHHHHHHTC--CBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCeEE-CCCCEEEEchHhccccCC--CcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 4566677776 899999999998643311 11122444567889999999987653
No 170
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.17 E-value=7.7e-06 Score=79.94 Aligned_cols=91 Identities=14% Similarity=0.197 Sum_probs=69.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CCC-----------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS----------------------------- 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~----------------------------- 133 (352)
.+|+|||||++|+.+|..|++.+ .+|+|+++.. +..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G--------------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~ 109 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMG--------------GRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQ 109 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhc
Confidence 58999999999999999999876 8999999875 311
Q ss_pred ----CC------cHHHHHHH----H---HHH-----HhCCCEEE-eCceEEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 134 ----SF------DDRLRHYA----T---TQL-----SKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 134 ----~~------~~~~~~~~----~---~~l-----~~~gV~v~-~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+ ..++.+.+ . +.+ ++.+|+++ .+++..++...|.+. |+++.+|.+|+|||.+|.
T Consensus 110 g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 110 YWFPDMTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPG 187 (523)
T ss_dssp TTCCCCTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECC
T ss_pred CcHHHHHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCC
Confidence 10 11222222 2 445 67899999 558888988888886 778999999999998876
No 171
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=6.7e-06 Score=78.82 Aligned_cols=92 Identities=23% Similarity=0.307 Sum_probs=67.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC-----------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----------------------------- 134 (352)
.+|+|||||++|+.+|..+++.+ .+|+|+++..+...
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g 69 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLG--------------QKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMG 69 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGT
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcC
Confidence 37999999999999999999876 89999998632100
Q ss_pred -------Cc-HH-----------HHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCC-cEEecceEEEecCCCcc
Q 018671 135 -------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG-TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 -------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g-~~i~~D~vi~a~G~~~~ 189 (352)
.+ +. +.+.+.+.+++.||+++.+....++++.+.+ .+| +++.+|.+|+|+|.+|.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~ 146 (455)
T 1ebd_A 70 IKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPI 146 (455)
T ss_dssp EECCSCEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEEC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCC
Confidence 00 00 2222345677789999999544577775544 566 68999999999999876
No 172
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.16 E-value=4.2e-06 Score=80.29 Aligned_cols=91 Identities=19% Similarity=0.338 Sum_probs=67.4
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC-----------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS----------------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~----------------------------- 134 (352)
+|+|||||++|+.+|..+++.+ .+|+++++. .+...
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~ 68 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQLG--------------MKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGA 68 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTE
T ss_pred CEEEECCChhHHHHHHHHHHCC--------------CeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCc
Confidence 7999999999999999999876 899999987 33100
Q ss_pred ------Cc-HH-----------HHHHHHHHHHhCCCEEEeCceEEEECCeEEEc-CCcEEecceEEEecCCCcc
Q 018671 135 ------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-DGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 ------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~-~g~~i~~D~vi~a~G~~~~ 189 (352)
.+ +. +...+.+.+++.||+++.+....++++.+.+. +|+++.+|.+|+|||.+|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~ 142 (455)
T 2yqu_A 69 KVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPL 142 (455)
T ss_dssp EECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEEC
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCC
Confidence 00 01 11123455667899999986555667767665 5778999999999999876
No 173
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.16 E-value=1.1e-05 Score=78.18 Aligned_cols=95 Identities=21% Similarity=0.278 Sum_probs=69.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCC--------------cHHHHHHHHHHHHh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQLSK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~--------------~~~~~~~~~~~l~~ 149 (352)
.+|+|||||++|+.+|..|++.+. ++.+|+++++...++.. .+++.....+.+++
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~-----------~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYG-----------DANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELES 104 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHG-----------GGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhcCC-----------CCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHh
Confidence 489999999999999999988651 12799999986422111 11221223456778
Q ss_pred CCCEEEeC-ceEEEEC--CeEEEc-CC--cEEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDS--QKLILN-DG--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~--~~v~~~-~g--~~i~~D~vi~a~G~~~~ 189 (352)
.||+++.+ +|..++. +.+.+. +| +++.+|.+|+|||.+|.
T Consensus 105 ~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 105 LGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp TTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEEC
T ss_pred CCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcC
Confidence 89999888 7999984 467776 54 57999999999998876
No 174
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.15 E-value=3.9e-06 Score=81.49 Aligned_cols=92 Identities=15% Similarity=0.266 Sum_probs=68.4
Q ss_pred CcEEEECCChHHHHHHHHHHH-hHhhHHHhhcCCCCCccEEEEEe---------CCCCCC--------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIE---------ANEILS-------------------- 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~-~~~~~~~~~~~~~~~~~~V~lv~---------~~~~l~-------------------- 133 (352)
.+|+|||||+.|+.+|..+++ .+ .+|+||| ...+..
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G--------------~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~ 73 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYG--------------KRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYM 73 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC--------------CCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHH
T ss_pred cCEEEECCChhHHHHHHHHHHhcC--------------CeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHH
Confidence 379999999999999999998 66 8999999 322210
Q ss_pred ------------------CCc-HHH-----------HHHHHHHHHhC-CCEEEeCceEEEECCeEEEc---C-----CcE
Q 018671 134 ------------------SFD-DRL-----------RHYATTQLSKS-GVRLVRGIVKDVDSQKLILN---D-----GTE 174 (352)
Q Consensus 134 ------------------~~~-~~~-----------~~~~~~~l~~~-gV~v~~~~V~~v~~~~v~~~---~-----g~~ 174 (352)
.++ ..+ .....+.|++. +|+++.+++..+++..|.++ + +++
T Consensus 74 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~ 153 (495)
T 2wpf_A 74 DHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKER 153 (495)
T ss_dssp HHHHHHHTTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEE
T ss_pred HHHhHHHhcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeE
Confidence 000 011 11123345677 99999998778888888886 4 678
Q ss_pred EecceEEEecCCCcc
Q 018671 175 VPYGLLVWSTGVGPS 189 (352)
Q Consensus 175 i~~D~vi~a~G~~~~ 189 (352)
+.+|.+|+|||.+|.
T Consensus 154 ~~~d~lViATGs~p~ 168 (495)
T 2wpf_A 154 LQADHILLATGSWPQ 168 (495)
T ss_dssp EEEEEEEECCCEEEC
T ss_pred EEcCEEEEeCCCCcC
Confidence 999999999999876
No 175
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.15 E-value=7.6e-06 Score=78.90 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=67.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CCCC----------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS---------------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~~---------------------------- 134 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++.+ +...
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~ 72 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLG--------------FKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFA 72 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHh
Confidence 37999999999999999999876 8999999873 3100
Q ss_pred ----------Cc-HH-----------HHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cC-C-cEEecceEEEecCCCc
Q 018671 135 ----------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--ND-G-TEVPYGLLVWSTGVGP 188 (352)
Q Consensus 135 ----------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~-g-~~i~~D~vi~a~G~~~ 188 (352)
.+ +. +...+.+.+++.||+++.+....++++.+.+ .+ + +++.+|.+|+|||.+|
T Consensus 73 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 73 SRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp HTTEEESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred hCccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCC
Confidence 00 00 1112345667889999999666677776544 45 4 5799999999999987
Q ss_pred c
Q 018671 189 S 189 (352)
Q Consensus 189 ~ 189 (352)
.
T Consensus 153 ~ 153 (474)
T 1zmd_A 153 T 153 (474)
T ss_dssp C
T ss_pred C
Confidence 6
No 176
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.12 E-value=9.3e-06 Score=76.31 Aligned_cols=92 Identities=22% Similarity=0.271 Sum_probs=66.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC------CcHHHHHH--------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS------FDDRLRHY-------------- 142 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~------~~~~~~~~-------------- 142 (352)
.+|+|||||++|+.+|..|++.+ .+|+|+|+. ...+. +.+...+.
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~ 71 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAG--------------VDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVP 71 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBC
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCccccccccChhHHHHHHHcCCcccccccc
Confidence 48999999999999999999876 889999875 32111 12222211
Q ss_pred -----------------------------HHHHHHh--CCCEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecCC
Q 018671 143 -----------------------------ATTQLSK--SGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 143 -----------------------------~~~~l~~--~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~ 186 (352)
+.+.|.+ .+++++.+ +|++++.+ .|++.+|+++.+|.||.|.|.
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 151 (397)
T 2vou_A 72 SSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGG 151 (397)
T ss_dssp CCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCT
T ss_pred ccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCc
Confidence 2222222 37888888 78888643 466788989999999999998
Q ss_pred Ccc
Q 018671 187 GPS 189 (352)
Q Consensus 187 ~~~ 189 (352)
...
T Consensus 152 ~S~ 154 (397)
T 2vou_A 152 ASV 154 (397)
T ss_dssp TCH
T ss_pred chh
Confidence 765
No 177
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.11 E-value=7.9e-06 Score=78.64 Aligned_cols=91 Identities=21% Similarity=0.282 Sum_probs=67.1
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCCC-----------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS----------------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~----------------------------- 134 (352)
+|+|||||++|+.+|..|++.+ .+|+|+++. .+...
T Consensus 4 dvvIIGgG~aGl~aA~~l~~~g--------------~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~ 69 (468)
T 2qae_A 4 DVVVIGGGPGGYVASIKAAQLG--------------MKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARY 69 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999876 899999987 33100
Q ss_pred ---------Cc-HH-----------HHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCC--cEEecceEEEecCCCcc
Q 018671 135 ---------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 ---------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~D~vi~a~G~~~~ 189 (352)
.+ +. +...+.+.+++.||+++.+....++++.+.+ .+| +++.+|.+|+|||.+|.
T Consensus 70 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~ 149 (468)
T 2qae_A 70 GLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPT 149 (468)
T ss_dssp TEECGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred CcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcC
Confidence 00 00 1112345566789999988555577776544 567 68999999999999876
No 178
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.11 E-value=1e-05 Score=76.41 Aligned_cols=90 Identities=17% Similarity=0.302 Sum_probs=67.4
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC---------CC---------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS--------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---------~~--------------------- 134 (352)
.|+|||||++|+.+|..|++.+ .+|+|+|+.... +.
T Consensus 7 dVvIIGgG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~ 72 (421)
T 3nix_A 7 DVLVIGAGPAGTVAASLVNKSG--------------FKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQ 72 (421)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEE
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcc
Confidence 8999999999999999999876 778888764210 00
Q ss_pred ------------------------------C-cHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce----EEEcCCc--E
Q 018671 135 ------------------------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK----LILNDGT--E 174 (352)
Q Consensus 135 ------------------------------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~----v~~~~g~--~ 174 (352)
+ ...+.+.+.+.+++.|++++.+ +|++++. +. +.+.+|+ +
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~ 152 (421)
T 3nix_A 73 KFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKRE 152 (421)
T ss_dssp ECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred cCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEE
Confidence 0 1244555666777789999999 8888864 32 3446787 7
Q ss_pred EecceEEEecCCCc
Q 018671 175 VPYGLLVWSTGVGP 188 (352)
Q Consensus 175 i~~D~vi~a~G~~~ 188 (352)
+.+|.||.|+|...
T Consensus 153 ~~a~~vV~A~G~~s 166 (421)
T 3nix_A 153 IEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEECCGGGC
T ss_pred EEcCEEEECCCCch
Confidence 99999999999776
No 179
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=4.6e-06 Score=80.58 Aligned_cols=92 Identities=23% Similarity=0.313 Sum_probs=67.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCC------------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------ 133 (352)
.+|+|||||++|+.+|..+++.+ .+|+|+|+..+..
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g 77 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYG--------------AKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYG 77 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTS--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred CCEEEEcCCHHHHHHHHHHHHCC--------------CcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcC
Confidence 38999999999999999999876 8999999864210
Q ss_pred ------------CCc------------HHHHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCCc--EEecceEEEecC
Q 018671 134 ------------SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDGT--EVPYGLLVWSTG 185 (352)
Q Consensus 134 ------------~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g~--~i~~D~vi~a~G 185 (352)
.++ ..+...+.+.+++.||+++.+++..++++.+.+ .+|+ ++.+|.+|+|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtG 157 (479)
T 2hqm_A 78 LYQNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATG 157 (479)
T ss_dssp BSTTSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCC
T ss_pred cccccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCC
Confidence 000 011122345566789999988777777765544 5676 899999999999
Q ss_pred CCcc
Q 018671 186 VGPS 189 (352)
Q Consensus 186 ~~~~ 189 (352)
.+|.
T Consensus 158 s~p~ 161 (479)
T 2hqm_A 158 GKAI 161 (479)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 8876
No 180
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.10 E-value=3.5e-05 Score=70.26 Aligned_cols=159 Identities=15% Similarity=0.182 Sum_probs=96.0
Q ss_pred cEEEECCChHHHHHHHHHHHh--HhhHHHhhcCCCCCccEEEEEeCCC-CCCC---------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEANE-ILSS--------------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~--~~~~~~~~~~~~~~~~~V~lv~~~~-~l~~--------------------------- 134 (352)
.|+|||||++|+.+|..|++. + .+|+++++.. ....
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g--------------~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~ 132 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPD--------------LKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTT--------------SCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCC
T ss_pred CEEEECccHHHHHHHHHHHhcCCC--------------CeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcc
Confidence 799999999999999999986 5 7899998752 2100
Q ss_pred -----------CcHHHHHHHHHHHHhC-CCEEEeC-ceEEEEC------C--e---EEEc--------------CCcEEe
Q 018671 135 -----------FDDRLRHYATTQLSKS-GVRLVRG-IVKDVDS------Q--K---LILN--------------DGTEVP 176 (352)
Q Consensus 135 -----------~~~~~~~~~~~~l~~~-gV~v~~~-~V~~v~~------~--~---v~~~--------------~g~~i~ 176 (352)
....+...+.+.+.+. ||+++.+ +|.++.. + . |.+. ++.++.
T Consensus 133 ~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~ 212 (326)
T 2gjc_A 133 YEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIE 212 (326)
T ss_dssp CEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEE
T ss_pred cccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEE
Confidence 1133445555666664 9999988 7877632 1 2 3221 345799
Q ss_pred c---------------ceEEEecCCCcc--hhhhh-c---CCCCCCCCc----------cccCCccccCCCCCEEEEccc
Q 018671 177 Y---------------GLLVWSTGVGPS--TLVKS-L---DLPKSPGGR----------IGIDEWLRVPSVQDVFAVGDC 225 (352)
Q Consensus 177 ~---------------D~vi~a~G~~~~--~~~~~-~---~l~~~~~G~----------i~Vd~~l~~~~~~~IfaiGD~ 225 (352)
+ |.||.|+|..++ .++.. + +..-.-.|- ..|+.+-...-+|++|+.|-.
T Consensus 213 A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~ 292 (326)
T 2gjc_A 213 LAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGME 292 (326)
T ss_dssp ESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHH
T ss_pred EeeccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChH
Confidence 9 999999998865 23222 1 111000011 122222222258999999997
Q ss_pred cccccCCCCcCCCCchHHHHHHHHHHHHHHHHHh
Q 018671 226 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 226 a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~ 259 (352)
+.... |.+..-++.-.-...|+.+|+.|...+
T Consensus 293 ~~~~~--~~~r~g~~fg~m~~sg~~~a~~~~~~~ 324 (326)
T 2gjc_A 293 VAELD--GLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp HHHHH--TCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhc--CCCCCChhhhhhhhhhHHHHHHHHHHh
Confidence 75332 222233344455578999998877654
No 181
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.10 E-value=1.5e-05 Score=79.10 Aligned_cols=91 Identities=18% Similarity=0.242 Sum_probs=68.5
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-C-CC-----C------------------C-----
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E-IL-----S------------------S----- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~-~l-----~------------------~----- 134 (352)
.|+|||||++|+++|..+++.+ .+|+|++.. . +. | .
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARMG--------------QQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhCC--------------CCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 7999999999999999999877 789999875 1 11 0 0
Q ss_pred -------------------------Cc-HHHHHHHHHHHHh-CCCEEEeCceEEEE--CC---eEEEcCCcEEecceEEE
Q 018671 135 -------------------------FD-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 182 (352)
Q Consensus 135 -------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~V~~v~--~~---~v~~~~g~~i~~D~vi~ 182 (352)
.+ ..+...+.+.+++ .||+++..+|+++. ++ +|.+.+|.++.+|.||+
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEE
Confidence 00 1344556667777 69999655888884 34 46777888899999999
Q ss_pred ecCCCcc
Q 018671 183 STGVGPS 189 (352)
Q Consensus 183 a~G~~~~ 189 (352)
|+|..+.
T Consensus 176 ATGt~s~ 182 (651)
T 3ces_A 176 TVGTFLD 182 (651)
T ss_dssp CCSTTTC
T ss_pred cCCCCcc
Confidence 9998754
No 182
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.10 E-value=1.7e-05 Score=73.81 Aligned_cols=57 Identities=16% Similarity=0.130 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce---EEEcCCcEEecceEEEecCCCcchhhhhcC
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~ 196 (352)
+...+.+.+++.|++++.+ +|++++. +. |.+.+| ++.+|.||+|+|.....+...++
T Consensus 151 l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g 213 (382)
T 1y56_B 151 ATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAG 213 (382)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcC
Confidence 3444566777889999998 8998864 23 556666 79999999999987655544433
No 183
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.09 E-value=1.8e-05 Score=72.93 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEEEcCC--cEEecceEEEecCCCcchhhhhc-CC
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDG--TEVPYGLLVWSTGVGPSTLVKSL-DL 197 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~~g--~~i~~D~vi~a~G~~~~~~~~~~-~l 197 (352)
+...+.+.+++.|++++++ +|+++..+ .|.+.+| .++.+|.||+|+|.....+...+ ++
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~ 219 (369)
T 3dme_A 152 LMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETS
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCC
Confidence 3445566677889999988 89988642 3556677 48999999999999877777666 54
No 184
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.08 E-value=2.2e-05 Score=73.52 Aligned_cols=91 Identities=13% Similarity=0.191 Sum_probs=68.9
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC------CC-------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------LS------------------------- 133 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------l~------------------------- 133 (352)
+|+|||||++|+.+|..|++.+ .+|+++|+... ..
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAG--------------IDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 7999999999999999999876 67777775421 00
Q ss_pred ------------------------C------CcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEEE-cCCc--E
Q 018671 134 ------------------------S------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLIL-NDGT--E 174 (352)
Q Consensus 134 ------------------------~------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~-~~g~--~ 174 (352)
. ....+.+.+.+.+.+.|++++.+ +|++++.+ .|.+ ++|+ +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 0 01234555666677789999999 89998742 4666 6887 7
Q ss_pred EecceEEEecCCCcc
Q 018671 175 VPYGLLVWSTGVGPS 189 (352)
Q Consensus 175 i~~D~vi~a~G~~~~ 189 (352)
+.+|.||.|.|....
T Consensus 150 ~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 150 LDCDYIAGCDGFHGI 164 (394)
T ss_dssp EECSEEEECCCTTCS
T ss_pred EEeCEEEECCCCCcH
Confidence 999999999998765
No 185
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.08 E-value=1.2e-05 Score=78.17 Aligned_cols=91 Identities=29% Similarity=0.444 Sum_probs=68.0
Q ss_pred cEEEECCChHHHHHHHHHHHh---HhhHHHhhcCCCCCccEEEEEeCCCCCC----------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDF---IMRDVRQRYSHVKDYIHVTLIEANEILS---------------------------- 133 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~---~~~~~~~~~~~~~~~~~V~lv~~~~~l~---------------------------- 133 (352)
+|+|||||++|+.+|..|++. + .+|+|+++..+..
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~~~~G--------------~~V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~ 69 (499)
T 1xdi_A 4 RIVILGGGPAGYEAALVAATSHPET--------------TQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPH 69 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTT--------------EEEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTT
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCc--------------CEEEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHHHHh
Confidence 799999999999999999987 5 8999999874200
Q ss_pred -CC---------c-HH-----------HHHHHHHHHHhCCCEEEeCceEEEEC------CeE--EEcCCc--EEecceEE
Q 018671 134 -SF---------D-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDS------QKL--ILNDGT--EVPYGLLV 181 (352)
Q Consensus 134 -~~---------~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~------~~v--~~~~g~--~i~~D~vi 181 (352)
.+ + .. +...+.+.+++.||+++.+.+..++. +.+ ..++|+ ++.+|.+|
T Consensus 70 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lv 149 (499)
T 1xdi_A 70 LGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVL 149 (499)
T ss_dssp TTBC------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEE
T ss_pred CCCccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEE
Confidence 00 1 11 22234566778899999987777776 444 345676 79999999
Q ss_pred EecCCCcc
Q 018671 182 WSTGVGPS 189 (352)
Q Consensus 182 ~a~G~~~~ 189 (352)
+|+|.+|.
T Consensus 150 iATGs~p~ 157 (499)
T 1xdi_A 150 VATGASPR 157 (499)
T ss_dssp ECCCEEEC
T ss_pred EcCCCCCC
Confidence 99998876
No 186
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.08 E-value=2.5e-05 Score=71.25 Aligned_cols=89 Identities=13% Similarity=0.216 Sum_probs=63.0
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-C--------------------CCCCcHHHHHHH
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I--------------------LSSFDDRLRHYA 143 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~--------------------l~~~~~~~~~~~ 143 (352)
.|+|||||++|+.+|..|++.+ .+|+|+|+.+ . +....+...+.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~G--------------~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHCC--------------CcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH
Confidence 7999999999999999999876 8899998762 2 011123333322
Q ss_pred HH-------------------------------------------HHHhCCCEEEeC-ceEEEECC----eEEEcCCcEE
Q 018671 144 TT-------------------------------------------QLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEV 175 (352)
Q Consensus 144 ~~-------------------------------------------~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i 175 (352)
.+ .|. .|++++.+ +|++++.+ .|.+++|+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 148 (336)
T 1yvv_A 70 KQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDAEGQNH 148 (336)
T ss_dssp HHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEETTSCEE
T ss_pred HHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeCCCcCc
Confidence 22 122 27889988 89988643 4566788766
Q ss_pred e-cceEEEecCCCc
Q 018671 176 P-YGLLVWSTGVGP 188 (352)
Q Consensus 176 ~-~D~vi~a~G~~~ 188 (352)
. +|.||.|+|...
T Consensus 149 ~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 149 GPFSHVIIATPAPQ 162 (336)
T ss_dssp EEESEEEECSCHHH
T ss_pred cccCEEEEcCCHHH
Confidence 4 999999998653
No 187
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.08 E-value=1.3e-05 Score=77.60 Aligned_cols=92 Identities=16% Similarity=0.220 Sum_probs=67.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC----------------------------C
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS----------------------------S 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~----------------------------~ 134 (352)
..|+|||||++|+.+|..|++.+ .+|+|+|+. .+.. .
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~ 91 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLG--------------MKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEA 91 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGG
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhh
Confidence 47999999999999999999876 899999975 3310 0
Q ss_pred C---------c------------HHHHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCC--cEEecceEEEecCCCcc
Q 018671 135 F---------D------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 ~---------~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~D~vi~a~G~~~~ 189 (352)
+ + ..+.......+++.+|+++.+....++++.+.+ .+| +++.+|.+|+|||.+|.
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~ 171 (491)
T 3urh_A 92 LGVEVANPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA 171 (491)
T ss_dssp GTEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECC
T ss_pred cCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCC
Confidence 0 0 011122344567789999988666677765554 455 57999999999998875
No 188
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.07 E-value=2.5e-05 Score=77.20 Aligned_cols=92 Identities=22% Similarity=0.279 Sum_probs=68.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-C-CC-----CC---C------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E-IL-----SS---F------------------ 135 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~-~l-----~~---~------------------ 135 (352)
..|+|||||++|+++|..+++.+ .+|+|++.. . +. |. .
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G--------------~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~ 93 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMG--------------AKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGK 93 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHH
Confidence 37999999999999999999877 789999875 1 11 00 0
Q ss_pred ----------------------------cHHHHHHHHHHHHh-CCCEEEeCceEEEE--CC---eEEEcCCcEEecceEE
Q 018671 136 ----------------------------DDRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLV 181 (352)
Q Consensus 136 ----------------------------~~~~~~~~~~~l~~-~gV~v~~~~V~~v~--~~---~v~~~~g~~i~~D~vi 181 (352)
...+.+.+.+.+++ .||++...+|+++. ++ +|.+.+|+++.+|.||
T Consensus 94 ~~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVV 173 (637)
T 2zxi_A 94 AIDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVV 173 (637)
T ss_dssp HHHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEE
T ss_pred HhhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEE
Confidence 01234455666777 59999655888875 33 3677889899999999
Q ss_pred EecCCCcc
Q 018671 182 WSTGVGPS 189 (352)
Q Consensus 182 ~a~G~~~~ 189 (352)
+|+|..++
T Consensus 174 LATG~~s~ 181 (637)
T 2zxi_A 174 VTTGTFLN 181 (637)
T ss_dssp ECCTTCBT
T ss_pred EccCCCcc
Confidence 99998754
No 189
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.02 E-value=2.7e-05 Score=73.30 Aligned_cols=91 Identities=18% Similarity=0.252 Sum_probs=65.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC------C---------------------
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------F--------------------- 135 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~------~--------------------- 135 (352)
..+|+|||||++|+.+|..|++.+ .+|+|+|+...... +
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~ 88 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSG--------------IDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFG 88 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhc
Confidence 358999999999999999999876 77888877521100 0
Q ss_pred -------------------------------------cHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--C--eEEEcCCc
Q 018671 136 -------------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGT 173 (352)
Q Consensus 136 -------------------------------------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~~~g~ 173 (352)
...+.+.+.+.+.+ ++++.+ +|++++. + .|.+++|+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~ 166 (407)
T 3rp8_A 89 GPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGS 166 (407)
T ss_dssp CCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSC
T ss_pred CCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCC
Confidence 01233444444444 788888 7888764 3 46678999
Q ss_pred EEecceEEEecCCCcc
Q 018671 174 EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 174 ~i~~D~vi~a~G~~~~ 189 (352)
++.+|.||.|.|....
T Consensus 167 ~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 167 SASGDLLIAADGSHSA 182 (407)
T ss_dssp EEEESEEEECCCTTCS
T ss_pred EEeeCEEEECCCcChH
Confidence 9999999999998765
No 190
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.01 E-value=2.6e-06 Score=89.80 Aligned_cols=91 Identities=18% Similarity=0.332 Sum_probs=70.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCCC-CC-------C--CCcHHHHHHHHHHHHhC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-IL-------S--SFDDRLRHYATTQLSKS 150 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~-~l-------~--~~~~~~~~~~~~~l~~~ 150 (352)
..++|+|||||++|+.+|..|++.+ . +|+|+++.+ +. | .++.+......+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G--------------~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLG--------------YSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--------------CCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 3578999999999999999999876 6 799999863 32 2 23456666677888999
Q ss_pred CCEEEeC-ceEEEECCeEEEcCCcEEecceEEEecCC-Ccc
Q 018671 151 GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPS 189 (352)
Q Consensus 151 gV~v~~~-~V~~v~~~~v~~~~g~~i~~D~vi~a~G~-~~~ 189 (352)
||+++.+ .+. ...+.+++++++.+|.||+|||. +|.
T Consensus 252 gv~~~~~~~v~---~~~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 252 GVKIICGKSLS---ENEITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp TCEEEESCCBS---TTSBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred CcEEEcccEec---cceEEhhhcCccCCCEEEEecCCCCCC
Confidence 9999998 442 23455556666889999999998 465
No 191
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.01 E-value=4.2e-06 Score=80.44 Aligned_cols=88 Identities=18% Similarity=0.208 Sum_probs=66.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC--------CCC--cHHHHHHHHHHHHhCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------SSF--DDRLRHYATTQLSKSGV 152 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l--------~~~--~~~~~~~~~~~l~~~gV 152 (352)
++|+|||||++|+++|..|++.+ ++.+|+++++. .+. |.+ ..++...+.+.+++.||
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv 74 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRC 74 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTE
T ss_pred ceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCc
Confidence 58999999999999999998764 23799999986 333 332 23566777788888999
Q ss_pred EEEeC-ceEEEECCeEEEcCCcEEecceEEEecCCCc
Q 018671 153 RLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 153 ~v~~~-~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
+++.+ .| ...|.+++. ++.||.||+|||..+
T Consensus 75 ~~~~~~~v----~~~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 75 AFYGNVEV----GRDVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp EEEBSCCB----TTTBCHHHH-HHHSSEEEECCCCCE
T ss_pred EEEeeeEE----eeEEEeccc-eEEcCEEEEecCcCC
Confidence 99988 55 233444443 478999999999986
No 192
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.01 E-value=4.3e-05 Score=75.46 Aligned_cols=52 Identities=12% Similarity=0.009 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEEC---Ce---EEEc--CCc--EEecceEEEecCCCcc
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDS---QK---LILN--DGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~---~~---v~~~--~g~--~i~~D~vi~a~G~~~~ 189 (352)
.+...+.+.+++.||+++++ +|+++.. +. |++. +|+ ++.+|.||+|+|....
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 256 HVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 34455666677889999999 7888753 22 5554 675 6899999999998653
No 193
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.01 E-value=1.2e-05 Score=77.45 Aligned_cols=91 Identities=21% Similarity=0.371 Sum_probs=67.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCC------------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------ 133 (352)
..|+|||||++|+.+|..|++.+ .+|+|+|+..+..
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~G--------------~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g 86 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAELG--------------ARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYG 86 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcC
Confidence 58999999999999999999876 8999999764310
Q ss_pred ------CCc------------HHHHHHHHHHHHhCCCEEEeCceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 134 ------SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 134 ------~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.++ ..+...+...+++.+|+++.+++..++.. .+. .+++++.+|.+|+|||.+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~ 161 (478)
T 3dk9_A 87 FPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPS 161 (478)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEEC
T ss_pred ccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCC
Confidence 011 11223344556778999998876666654 344 56788999999999998775
No 194
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.01 E-value=2.7e-06 Score=81.76 Aligned_cols=92 Identities=12% Similarity=0.151 Sum_probs=66.8
Q ss_pred CcEEEECCChHHHHHHHHHHH-hHhhHHHhhcCCCCCccEEEEEeCC-CCC--------CC--CcHHHHHHHHHHHHhCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------SS--FDDRLRHYATTQLSKSG 151 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~-~~~~~~~~~~~~~~~~~~V~lv~~~-~~l--------~~--~~~~~~~~~~~~l~~~g 151 (352)
++|+|||||++|+.+|..|++ .... ...+.+|+++++. .+. |. ...++...+.+.+++.+
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~~--------~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~ 75 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADTT--------EDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPR 75 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHS--------TTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhhCccc--------cCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 489999999999999999987 5210 0012899999986 332 21 22456677778888899
Q ss_pred CEEEeC-ceEEEECCeEEEcCCcEEecceEEEecCCCc
Q 018671 152 VRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 152 V~v~~~-~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
|+++.+ .| ...|.++++ ++.||.||+|+|..+
T Consensus 76 v~~~~~v~v----~~~v~~~~~-~~~~d~lViAtG~~~ 108 (456)
T 1lqt_A 76 FRFFGNVVV----GEHVQPGEL-SERYDAVIYAVGAQS 108 (456)
T ss_dssp EEEEESCCB----TTTBCHHHH-HHHSSEEEECCCCCE
T ss_pred CEEEeeEEE----CCEEEECCC-eEeCCEEEEeeCCCC
Confidence 999988 43 344555555 478999999999973
No 195
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.00 E-value=2.4e-05 Score=73.31 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEEC--C---eEEEcCCcEEecceEEEecCCCcchhhhhcC
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~---~v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~ 196 (352)
.+...+.+.+++.|++++.+ +|+++.. + .|.+.+| ++.+|.||+|+|.....+...++
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g 238 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAG 238 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcC
Confidence 45555667778889999998 8998864 2 3556677 79999999999987765555444
No 196
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.99 E-value=2.7e-05 Score=77.17 Aligned_cols=92 Identities=20% Similarity=0.291 Sum_probs=68.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC--CC-----CC----------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE--IL-----SS---------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~--~l-----~~---------------------- 134 (352)
..|+|||||++|+++|..+++.+ .+|+|++... +. |.
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~ 87 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGG--------------LHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGK 87 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHH
T ss_pred CCEEEECccHHHHHHHHHHHHCC--------------CcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHH
Confidence 38999999999999999999887 7888888751 11 00
Q ss_pred --------------------------Cc-HHHHHHHHHHHHhC-CCEEEeCceEEEE--CCe---EEEcCCcEEecceEE
Q 018671 135 --------------------------FD-DRLRHYATTQLSKS-GVRLVRGIVKDVD--SQK---LILNDGTEVPYGLLV 181 (352)
Q Consensus 135 --------------------------~~-~~~~~~~~~~l~~~-gV~v~~~~V~~v~--~~~---v~~~~g~~i~~D~vi 181 (352)
.+ ..+...+.+.+++. ||+++.++|+++. ++. |.+.+|+++.+|.||
T Consensus 88 ~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VV 167 (641)
T 3cp8_A 88 AIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAI 167 (641)
T ss_dssp HHHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEE
T ss_pred HHHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEE
Confidence 00 13445556667774 9999766788764 443 667888899999999
Q ss_pred EecCCCcc
Q 018671 182 WSTGVGPS 189 (352)
Q Consensus 182 ~a~G~~~~ 189 (352)
+|+|..++
T Consensus 168 LATG~~s~ 175 (641)
T 3cp8_A 168 LACGTFLN 175 (641)
T ss_dssp ECCTTCBT
T ss_pred ECcCCCCC
Confidence 99998755
No 197
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.98 E-value=1.2e-05 Score=77.39 Aligned_cols=91 Identities=23% Similarity=0.320 Sum_probs=65.4
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC---------CC---------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS--------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---------~~--------------------- 134 (352)
+|+|||||++|+.+|..|++.+ .+|+++++..+. |.
T Consensus 5 dvvIIGaG~aGl~aA~~l~~~G--------------~~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g 70 (464)
T 2a8x_A 5 DVVVLGAGPGGYVAAIRAAQLG--------------LSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFG 70 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcC
Confidence 7999999999999999999876 899999986321 00
Q ss_pred ------Cc-H-----------HHHHHHHHHHHhCCCEEEeCceEEEECCeEE--EcCC--cEEecceEEEecCCCcc
Q 018671 135 ------FD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLI--LNDG--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 ------~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~--~~~g--~~i~~D~vi~a~G~~~~ 189 (352)
.+ + .+...+.+.+++.||+++.+....++++.+. +.+| +++.+|.+|+|+|..|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 71 ISGEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTR 147 (464)
T ss_dssp EEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEEC
T ss_pred CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 00 0 0112234566778999998843335555544 4567 68999999999999875
No 198
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.97 E-value=5.3e-05 Score=75.01 Aligned_cols=92 Identities=21% Similarity=0.322 Sum_probs=69.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCC------------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------ 133 (352)
..|+|||||++|+.+|..|++.+ .+|+|+|+.....
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G--------------~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~ 89 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLG--------------HDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYV 89 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCE
T ss_pred CCEEEECcCHHHHHHHHHHHcCC--------------CCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCc
Confidence 48999999999999999999876 6777777642100
Q ss_pred ----------------------------------CC-cHHHHHHHHHHHHhCCCEEEeC-ceEEEECC-----eEEEc-C
Q 018671 134 ----------------------------------SF-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN-D 171 (352)
Q Consensus 134 ----------------------------------~~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~-~ 171 (352)
.+ ...+...+.+.+++.||+++.+ +|+++..+ .|.+. +
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~ 169 (591)
T 3i3l_A 90 KKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRG 169 (591)
T ss_dssp EECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEET
T ss_pred ccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecC
Confidence 00 1345566677778899999999 89998753 46666 6
Q ss_pred C--cEEecceEEEecCCCcc
Q 018671 172 G--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 172 g--~~i~~D~vi~a~G~~~~ 189 (352)
| +++.+|.||.|+|....
T Consensus 170 G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 170 GESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp TEEEEEEESEEEECCGGGCH
T ss_pred CceEEEEcCEEEECCCCcch
Confidence 7 57999999999998653
No 199
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.97 E-value=2.5e-05 Score=76.61 Aligned_cols=92 Identities=20% Similarity=0.242 Sum_probs=68.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CC--------CC-------------CC------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI--------LS-------------SF------ 135 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~--------l~-------------~~------ 135 (352)
.+|+|||||++|+.+|..|++.+ .+|+++|+. .+ .| .+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELG--------------RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQ 82 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhh
Confidence 37999999999999999999876 789999875 22 11 00
Q ss_pred ----------cHHHHHHHHHHHHhCC--CEEEeC-ceEEEEC--C----eEEEcCCcEEecceEEEecCCCcc
Q 018671 136 ----------DDRLRHYATTQLSKSG--VRLVRG-IVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 136 ----------~~~~~~~~~~~l~~~g--V~v~~~-~V~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+++.+++....++.+ ++++.+ +|.+++. + .|.+++|+++.+|.||+|+|....
T Consensus 83 ~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 83 EWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSV 155 (542)
T ss_dssp HCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCC
T ss_pred ccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCC
Confidence 1345566666666665 567777 7888753 2 467788989999999999996533
No 200
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.97 E-value=5.4e-05 Score=70.46 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEECC--e--EEEcCCcEEecceEEEecCCCcchhhhhcC
Q 018671 137 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K--LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 137 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~--v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~ 196 (352)
..+...+.+.+++.|++++.+ +|++++.+ . |.+++| ++.+|.||+|+|.....+...++
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc
Confidence 345556667778889999998 89888643 3 444444 79999999999987766655544
No 201
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.96 E-value=2e-05 Score=76.20 Aligned_cols=91 Identities=22% Similarity=0.295 Sum_probs=65.7
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC---------C---------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------S--------------------- 133 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l---------~--------------------- 133 (352)
+|+|||||++|+.+|..+++.+ .+|+|+++. .+. |
T Consensus 8 dVvIIGaG~aGl~aA~~l~~~G--------------~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~g 73 (482)
T 1ojt_A 8 DVVVLGGGPGGYSAAFAAADEG--------------LKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANG 73 (482)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCC
Confidence 7999999999999999998876 899999984 321 0
Q ss_pred ------CCc-HH-----------HHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCC------------cEEecceEE
Q 018671 134 ------SFD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG------------TEVPYGLLV 181 (352)
Q Consensus 134 ------~~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g------------~~i~~D~vi 181 (352)
.++ .. +...+.+.+++.||+++.+....++++.+.+ .+| .++.+|.+|
T Consensus 74 i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lV 153 (482)
T 1ojt_A 74 IKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCI 153 (482)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEE
Confidence 011 01 1112345567789999988544467776655 345 679999999
Q ss_pred EecCCCcc
Q 018671 182 WSTGVGPS 189 (352)
Q Consensus 182 ~a~G~~~~ 189 (352)
+|+|..|.
T Consensus 154 iAtGs~p~ 161 (482)
T 1ojt_A 154 IAAGSRVT 161 (482)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCCC
Confidence 99999876
No 202
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.95 E-value=4.1e-05 Score=70.89 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEEC--C--eEEEcCCcEEecceEEEecCCCcchhhhh
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKS 194 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~~~~~~~~ 194 (352)
.+...+.+.+++.|++++.+ +|++++. + .|.+.+| ++.+|.||+|+|.....+...
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~ 210 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKDLLPE 210 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGGTSTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHhhccc
Confidence 34455566677889999998 8998864 2 3555566 599999999999866555443
No 203
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.94 E-value=9.1e-06 Score=76.08 Aligned_cols=93 Identities=25% Similarity=0.359 Sum_probs=67.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-C------CCC-C-----cHHHHH-HHHHHHHh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I------LSS-F-----DDRLRH-YATTQLSK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~------l~~-~-----~~~~~~-~~~~~l~~ 149 (352)
.+|+|||||++|+.+|..|++.+. +.+|+++++.. . ++. + ..++.. ...+.+++
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~~g~------------~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 72 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRKLDG------------ETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQ 72 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCS------------SSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHH
T ss_pred CcEEEECChHHHHHHHHHHHhhCC------------CCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHh
Confidence 489999999999999999987652 26799998752 1 110 0 112211 23455678
Q ss_pred CCCEEEeC-ceEEEEC--CeEEEcCCcEEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~--~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+|+++.+ ++..++. ..|.+.+ .++.+|.+|+|||.+|.
T Consensus 73 ~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 73 LNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp TTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEEC
T ss_pred CCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcC
Confidence 89999987 7888876 4677764 47999999999999876
No 204
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.93 E-value=2.7e-05 Score=75.05 Aligned_cols=92 Identities=21% Similarity=0.325 Sum_probs=66.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CCC--CCc------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS--SFD------------------------ 136 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~--~~~------------------------ 136 (352)
..|+|||||++|+.+|..+++.+ .+|+|+|+.. ... .++
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~ 69 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLG--------------LKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEA 69 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCC--------------CEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHH
Confidence 37999999999999999999877 8999999863 100 000
Q ss_pred -----------------------------HHHHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCC--cEEecceEEEe
Q 018671 137 -----------------------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWS 183 (352)
Q Consensus 137 -----------------------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~D~vi~a 183 (352)
..+...+...+++.+|+++.+....++++.+.+ .+| +++.+|.+|+|
T Consensus 70 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlA 149 (476)
T 3lad_A 70 HESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILA 149 (476)
T ss_dssp HTTSGGGTEECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEEC
T ss_pred HHHHHhcCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEc
Confidence 011122334566779999998666677765544 456 57999999999
Q ss_pred cCCCcc
Q 018671 184 TGVGPS 189 (352)
Q Consensus 184 ~G~~~~ 189 (352)
||.+|.
T Consensus 150 tG~~p~ 155 (476)
T 3lad_A 150 SGSKPV 155 (476)
T ss_dssp CCEEEC
T ss_pred CCCCCC
Confidence 998875
No 205
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.89 E-value=5.9e-05 Score=70.37 Aligned_cols=90 Identities=21% Similarity=0.268 Sum_probs=65.1
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CCC--------------------C---------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS--------------------S--------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~--------------------~--------- 134 (352)
.|+|||||++|+.+|..|++.+ .+|+|+|+.. ... .
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G--------------~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 71 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcc
Confidence 7999999999999999999875 5555555431 100 0
Q ss_pred ----------------------------CcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce---EEE---cCCcEEec
Q 018671 135 ----------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LIL---NDGTEVPY 177 (352)
Q Consensus 135 ----------------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~---~~g~~i~~ 177 (352)
-...+.+.+.+.+++.|++++.+ +|++++. +. |.+ .++.++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a 151 (397)
T 3cgv_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEc
Confidence 01234566677777889999998 8888753 33 555 24568999
Q ss_pred ceEEEecCCCc
Q 018671 178 GLLVWSTGVGP 188 (352)
Q Consensus 178 D~vi~a~G~~~ 188 (352)
|.||.|+|...
T Consensus 152 ~~vV~A~G~~s 162 (397)
T 3cgv_A 152 KMVIAADGFES 162 (397)
T ss_dssp EEEEECCCTTC
T ss_pred CEEEECCCcch
Confidence 99999999876
No 206
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.89 E-value=6.6e-05 Score=73.19 Aligned_cols=92 Identities=17% Similarity=0.250 Sum_probs=67.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC--------CCC----------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE--------ILS---------------------- 133 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~--------~l~---------------------- 133 (352)
..|+|||||++|+.+|..+++.+ .+|+|||+.+ .+.
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G--------------~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~ 98 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYG--------------KKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQ 98 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHH
Confidence 37999999999999999999876 8999999731 010
Q ss_pred ----------------CCc-H-----------HHHHHHHHHHHhCCCEEEeCceEEEECCeEEEc--CCc--EEecceEE
Q 018671 134 ----------------SFD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILN--DGT--EVPYGLLV 181 (352)
Q Consensus 134 ----------------~~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~--~g~--~i~~D~vi 181 (352)
..+ + .+...+...+++.+|+++.+.+..++++.+.+. +|+ ++.+|.+|
T Consensus 99 ~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lV 178 (519)
T 3qfa_A 99 ALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFL 178 (519)
T ss_dssp HHHHHHHTTBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEE
T ss_pred HHHHHHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEE
Confidence 000 0 111122234667899999888888888876653 454 79999999
Q ss_pred EecCCCcc
Q 018671 182 WSTGVGPS 189 (352)
Q Consensus 182 ~a~G~~~~ 189 (352)
+|||.+|.
T Consensus 179 iATGs~p~ 186 (519)
T 3qfa_A 179 IATGERPR 186 (519)
T ss_dssp ECCCEEEC
T ss_pred EECCCCcC
Confidence 99998876
No 207
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.88 E-value=6.1e-05 Score=74.28 Aligned_cols=91 Identities=24% Similarity=0.354 Sum_probs=69.5
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CC--------------------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-------------------------------- 131 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~-------------------------------- 131 (352)
.|+|||||++|+-+|.+|++.+ .+|+|+|+. ..
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G--------------~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGG--------------VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 7999999999999999999876 778888763 11
Q ss_pred -----CC-----C---------------C-cHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEE--cCC-cEEec
Q 018671 132 -----LS-----S---------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLIL--NDG-TEVPY 177 (352)
Q Consensus 132 -----l~-----~---------------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~--~~g-~~i~~ 177 (352)
+. . + ...+.+.+.+.+++.|++++.+ +|++++.+ .|++ .+| +++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a 196 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRA 196 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEe
Confidence 00 0 0 1345666777777789999998 89988654 3555 577 68999
Q ss_pred ceEEEecCCCcc
Q 018671 178 GLLVWSTGVGPS 189 (352)
Q Consensus 178 D~vi~a~G~~~~ 189 (352)
|.||.|.|....
T Consensus 197 ~~vV~ADG~~S~ 208 (570)
T 3fmw_A 197 RYGVGCDGGRST 208 (570)
T ss_dssp SEEEECSCSSCH
T ss_pred CEEEEcCCCCch
Confidence 999999998763
No 208
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.88 E-value=8.8e-05 Score=74.71 Aligned_cols=56 Identities=11% Similarity=0.164 Sum_probs=40.3
Q ss_pred HHHHHHHhCCCEEEeC-ceEEEEC--Ce--EEEcCCcEEecceEEEecCCCcchhhhhcCC
Q 018671 142 YATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 197 (352)
Q Consensus 142 ~~~~~l~~~gV~v~~~-~V~~v~~--~~--v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~l 197 (352)
.+.+.+++.|++++.+ +|+++.. +. |.+.+|.++.+|.||+|+|.....+....++
T Consensus 422 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~l 482 (676)
T 3ps9_A 422 NVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTL 482 (676)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTTC
T ss_pred HHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccCC
Confidence 3445556789999999 8988853 43 4556778899999999999876544444443
No 209
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.87 E-value=2.4e-06 Score=80.69 Aligned_cols=46 Identities=13% Similarity=0.022 Sum_probs=38.1
Q ss_pred cC-CccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHH
Q 018671 207 ID-EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 256 (352)
Q Consensus 207 Vd-~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~ 256 (352)
+| ++|+++..|++|++|++..+..+.|+ -+-|.|...|..+++++.
T Consensus 353 ~~~~tmes~~~~gly~~GE~ldv~g~~GG----ynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 353 ISSKTMESNQVSGLYFIGEVLDVTGWLGG----YNFQWAWSSAYACALSIS 399 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBSCEECTTT----HHHHHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCEEEEEEeEEeccCCCC----HHHHHHHHHHHHHHHHHh
Confidence 66 68998899999999999998766663 456889999999998763
No 210
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.87 E-value=6.6e-05 Score=74.04 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEE--C-C---eEEEc--CCc--EEecceEEEecCCCcc
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVKDVD--S-Q---KLILN--DGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~~v~--~-~---~v~~~--~g~--~i~~D~vi~a~G~~~~ 189 (352)
+...+.+.+++.||+++++ +|+++. + + +|++. +|+ ++.+|.||+|+|....
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 3455666677889999999 788875 2 3 25554 675 6899999999997654
No 211
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.87 E-value=3e-05 Score=71.14 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=29.9
Q ss_pred CCCEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecCC
Q 018671 150 SGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~ 186 (352)
.|++++++ +|++|+.+ .|.+++|+++.+|.||+|++.
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred cCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 48999999 89998643 456678877899999999873
No 212
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.86 E-value=2.9e-05 Score=74.86 Aligned_cols=92 Identities=20% Similarity=0.258 Sum_probs=64.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCC-----------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~----------------------------- 134 (352)
.+|+|||||++|+.+|..|++.+ .+|+|+++...+..
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G--------------~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~ 71 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLG--------------FNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQK 71 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGG
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHh
Confidence 37999999999999999999876 89999998421110
Q ss_pred ----------Cc-HH-----------HHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCC--cE------EecceEEE
Q 018671 135 ----------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TE------VPYGLLVW 182 (352)
Q Consensus 135 ----------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~------i~~D~vi~ 182 (352)
++ +. +...+.+.+++.||+++.+.....+++.+.+ .+| ++ +.+|.+|+
T Consensus 72 ~gi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lVi 151 (478)
T 1v59_A 72 RGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIV 151 (478)
T ss_dssp GTEEECSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEE
T ss_pred cCcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEE
Confidence 00 00 1112345567789999988433335555443 456 56 99999999
Q ss_pred ecCCCcc
Q 018671 183 STGVGPS 189 (352)
Q Consensus 183 a~G~~~~ 189 (352)
|+|.+|.
T Consensus 152 AtGs~p~ 158 (478)
T 1v59_A 152 ATGSEVT 158 (478)
T ss_dssp CCCEEEC
T ss_pred CcCCCCC
Confidence 9999875
No 213
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.83 E-value=5.8e-05 Score=70.83 Aligned_cols=92 Identities=16% Similarity=0.272 Sum_probs=63.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCCC-----C--C-c---HHH------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-----S--F-D---DRL------------ 139 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-----~--~-~---~~~------------ 139 (352)
.+|+|||||++|+.+|..|++.+ .+|+|+|+. .... . + + ...
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNG--------------IDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 48999999999999999999876 899999875 2211 0 0 0 000
Q ss_pred ----------------------------------HHHHHHHHHhC--CCEEEeC-ceEEEECC----eEEEcCCcEEecc
Q 018671 140 ----------------------------------RHYATTQLSKS--GVRLVRG-IVKDVDSQ----KLILNDGTEVPYG 178 (352)
Q Consensus 140 ----------------------------------~~~~~~~l~~~--gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D 178 (352)
+..+.+.|.+. +++++.+ +|++++.+ .|++++|+++.+|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad 172 (398)
T 2xdo_A 93 LALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETAD 172 (398)
T ss_dssp HCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEES
T ss_pred hhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecC
Confidence 01122223221 3567888 78888643 4677889889999
Q ss_pred eEEEecCCCcc
Q 018671 179 LLVWSTGVGPS 189 (352)
Q Consensus 179 ~vi~a~G~~~~ 189 (352)
.||.|.|....
T Consensus 173 ~vV~AdG~~S~ 183 (398)
T 2xdo_A 173 LVILANGGMSK 183 (398)
T ss_dssp EEEECSCTTCS
T ss_pred EEEECCCcchh
Confidence 99999998764
No 214
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.82 E-value=0.0001 Score=73.08 Aligned_cols=92 Identities=14% Similarity=0.300 Sum_probs=65.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CC-------CCC---------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-------LSS--------------------- 134 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~-------l~~--------------------- 134 (352)
.+|+|||||++|+.+|..+++.+ .+|+++++. .. +..
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~~g--------------~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~ 173 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAKYG--------------AKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSH 173 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHH
T ss_pred ccEEEECCCccHHHHHHHHHhCC--------------CeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHH
Confidence 58999999999999999999876 899999962 10 100
Q ss_pred -----------Cc--------HHHHHHH-----------HHHHHhCCCEEEeCceEEEECCeEEE--cCC--cEEecceE
Q 018671 135 -----------FD--------DRLRHYA-----------TTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLL 180 (352)
Q Consensus 135 -----------~~--------~~~~~~~-----------~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~D~v 180 (352)
++ +.+.+++ ...+++.+|+++.+....++...+.+ .+| +++.+|.|
T Consensus 174 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~l 253 (598)
T 2x8g_A 174 ALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKI 253 (598)
T ss_dssp HHHHHHHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEE
T ss_pred HHhhHHhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEE
Confidence 00 1111111 22356779999888777778877665 456 46999999
Q ss_pred EEecCCCcc
Q 018671 181 VWSTGVGPS 189 (352)
Q Consensus 181 i~a~G~~~~ 189 (352)
|+|||.+|.
T Consensus 254 viAtGs~p~ 262 (598)
T 2x8g_A 254 ILATGERPK 262 (598)
T ss_dssp EECCCEEEC
T ss_pred EEeCCCCCC
Confidence 999998776
No 215
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.81 E-value=3.4e-05 Score=73.86 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=66.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC-------------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------------------------------- 132 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l------------------------------- 132 (352)
..|+|||||++|+.+|..|++.+ .+|+|+|+....
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G--------------~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~ 72 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRG--------------LKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELEN 72 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSS--------------CCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHh
Confidence 38999999999999999998765 566666653110
Q ss_pred ------------------C-----CCcHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce---EEEc---CCc--EEecc
Q 018671 133 ------------------S-----SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILN---DGT--EVPYG 178 (352)
Q Consensus 133 ------------------~-----~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~---~g~--~i~~D 178 (352)
+ --...+.+.+.+.+.+.|++++.+ +|+++.. +. |.+. +|+ ++.+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad 152 (453)
T 3atr_A 73 KINGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSK 152 (453)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECS
T ss_pred hhcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcC
Confidence 0 001345666777777889999999 7888753 34 4454 676 79999
Q ss_pred eEEEecCCCcc
Q 018671 179 LLVWSTGVGPS 189 (352)
Q Consensus 179 ~vi~a~G~~~~ 189 (352)
.||.|+|....
T Consensus 153 ~VV~AdG~~s~ 163 (453)
T 3atr_A 153 VVVEATGYSRS 163 (453)
T ss_dssp EEEECCGGGCT
T ss_pred EEEECcCCchh
Confidence 99999997654
No 216
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.79 E-value=0.00019 Score=69.53 Aligned_cols=92 Identities=20% Similarity=0.283 Sum_probs=67.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC------------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL------------------------------ 132 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l------------------------------ 132 (352)
..|+|||||++|+-+|..|++.+ .+|+++|+. ...
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~ 78 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLGG--------------VDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVET 78 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccc
Confidence 48999999999999999999876 555555542 110
Q ss_pred ----------------C-CC-------cHHHHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCCc---EEecceE
Q 018671 133 ----------------S-SF-------DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT---EVPYGLL 180 (352)
Q Consensus 133 ----------------~-~~-------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~---~i~~D~v 180 (352)
+ .. ...+.+.+.+.+.+.|++++.+ +|++++.+ .|++.+++ ++.+|.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~v 158 (499)
T 2qa2_A 79 STQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYV 158 (499)
T ss_dssp ESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEE
T ss_pred cccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEE
Confidence 0 00 1345666777778889999999 89888643 35566664 7999999
Q ss_pred EEecCCCcc
Q 018671 181 VWSTGVGPS 189 (352)
Q Consensus 181 i~a~G~~~~ 189 (352)
|.|.|....
T Consensus 159 VgADG~~S~ 167 (499)
T 2qa2_A 159 VGCDGGRST 167 (499)
T ss_dssp EECCCTTCH
T ss_pred EEccCcccH
Confidence 999998764
No 217
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.79 E-value=6e-05 Score=72.88 Aligned_cols=91 Identities=22% Similarity=0.252 Sum_probs=65.6
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC---------CC-----------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE---------IL----------------------- 132 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~---------~l----------------------- 132 (352)
.|+|||||++|+.+|..+++.+ .+|+|||+.+ +.
T Consensus 8 DvvVIG~G~aGl~aA~~la~~G--------------~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~ 73 (488)
T 3dgz_A 8 DLLVIGGGSGGLACAKEAAQLG--------------KKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGM 73 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHH
Confidence 7999999999999999999877 8999998510 10
Q ss_pred --------------CCCc-H-----------HHHHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCC--cEEecceEEE
Q 018671 133 --------------SSFD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVW 182 (352)
Q Consensus 133 --------------~~~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~D~vi~ 182 (352)
+.++ + .+...+...+++.+|+++.+.+..++++.+.+ .+| .++.+|.+|+
T Consensus 74 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lVi 153 (488)
T 3dgz_A 74 IRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVI 153 (488)
T ss_dssp HHHHHHTTCCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEE
T ss_pred HHHHHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEE
Confidence 0111 0 11112334566789999888777777776555 455 4799999999
Q ss_pred ecCCCcc
Q 018671 183 STGVGPS 189 (352)
Q Consensus 183 a~G~~~~ 189 (352)
|||.+|.
T Consensus 154 ATGs~p~ 160 (488)
T 3dgz_A 154 ATGGRPR 160 (488)
T ss_dssp CCCEEEC
T ss_pred cCCCCCC
Confidence 9998876
No 218
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.79 E-value=0.00018 Score=70.32 Aligned_cols=49 Identities=20% Similarity=0.277 Sum_probs=38.0
Q ss_pred HHHHHHHHhCCCEEEeCceEEEEC--C----eEEEcCCcEEecceEEEecCCCcc
Q 018671 141 HYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 141 ~~~~~~l~~~gV~v~~~~V~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+.+.+.+++.||+++.++|++++. + .|.+++|+++.+|.||.|+|....
T Consensus 169 ~~L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 445555667899999888888753 2 466788888999999999998664
No 219
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.79 E-value=0.00012 Score=71.19 Aligned_cols=52 Identities=17% Similarity=0.174 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEEC--C---eEEE--cCCc--EEecceEEEecCCCcc
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLIL--NDGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~---~v~~--~~g~--~i~~D~vi~a~G~~~~ 189 (352)
.+.+.+.+.+++.||+++.+ +|+++.. + .|.+ .+|+ ++.+|.||.|+|....
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 45566677777899999998 7888754 3 2444 4574 7999999999998764
No 220
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.79 E-value=1.2e-05 Score=81.37 Aligned_cols=86 Identities=24% Similarity=0.294 Sum_probs=65.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CC---------CCC--cHHHHHHHHHHHHh
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL---------SSF--DDRLRHYATTQLSK 149 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l---------~~~--~~~~~~~~~~~l~~ 149 (352)
..++|+|||||++|+++|..|++.+ .+|+|+++.+ +. |.. ...+..++.+.+.+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G--------------~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~ 455 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRG--------------YDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAE 455 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHT
T ss_pred ccceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHH
Confidence 4468999999999999999999876 8999999863 21 221 24566777788888
Q ss_pred C-CCEEEeC-ceEEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 150 S-GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~-gV~v~~~-~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
. +|+++.+ .+ ...+++++.+|.+|+|+|..|.
T Consensus 456 ~~gv~~~~~~~v--------~~~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 456 LPNVEIYRESPM--------TGDDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp CTTEEEESSCCC--------CHHHHHHTTCCEEEECCCEEEC
T ss_pred cCCCEEEECCee--------cHHHHhhcCCCEEEEcCCCccc
Confidence 7 9998887 33 2234456889999999999854
No 221
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.78 E-value=9.4e-05 Score=71.38 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=65.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC---C-------C----------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---E-------I---------------------- 131 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~---~-------~---------------------- 131 (352)
..|+|||||++|+.+|..+++.+ .+|+|||+. . +
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~ 75 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVLNG--------------ARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLG 75 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHH
Confidence 48999999999999999999877 899999831 0 0
Q ss_pred ----------C-----CCCc-HHH-----------HHHHHHHHHhCCCEEEeCceEEEECCeEEE--cCCc-EEecceEE
Q 018671 132 ----------L-----SSFD-DRL-----------RHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDGT-EVPYGLLV 181 (352)
Q Consensus 132 ----------l-----~~~~-~~~-----------~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g~-~i~~D~vi 181 (352)
+ +.++ +.+ .......+++.+|+++.+...-++++.+.+ .+|+ ++.+|.+|
T Consensus 76 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lv 155 (483)
T 3dgh_A 76 EAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFV 155 (483)
T ss_dssp HHHHHHHHTTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEE
T ss_pred HHHHHHHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEE
Confidence 0 0111 111 111224466789999988777777776655 4564 79999999
Q ss_pred EecCCCcc
Q 018671 182 WSTGVGPS 189 (352)
Q Consensus 182 ~a~G~~~~ 189 (352)
+|||.+|.
T Consensus 156 iATGs~p~ 163 (483)
T 3dgh_A 156 IAVGGRPR 163 (483)
T ss_dssp ECCCEEEC
T ss_pred EeCCCCcC
Confidence 99998876
No 222
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.77 E-value=7e-05 Score=70.56 Aligned_cols=58 Identities=19% Similarity=0.316 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceE---------EEECC--e--EEEcCCcEEecceEEEecCCCcchhhh-hcCC
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVK---------DVDSQ--K--LILNDGTEVPYGLLVWSTGVGPSTLVK-SLDL 197 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~---------~v~~~--~--v~~~~g~~i~~D~vi~a~G~~~~~~~~-~~~l 197 (352)
+...+.+.+++.|++++.+ +|+ ++..+ . |.+.+| ++.+|.||+|+|.....+.. .+++
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~ 246 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGL 246 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCC
Confidence 4455666777889999988 788 77542 2 344455 79999999999987765655 5543
No 223
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.77 E-value=7.1e-05 Score=72.50 Aligned_cols=91 Identities=20% Similarity=0.271 Sum_probs=64.4
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCC---------------------------C---
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS---------------------------S--- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~---------------------------~--- 134 (352)
.|+|||||++|+.+|..+++.+ .+|+|+|++++.. .
T Consensus 10 DvvVIGgG~aGl~aA~~la~~G--------------~~V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 75 (492)
T 3ic9_A 10 DVAIIGTGTAGMGAYRAAKKHT--------------DKVVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGI 75 (492)
T ss_dssp EEEEECCSHHHHHHHHHHHTTC--------------SCEEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTE
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCc
Confidence 7999999999999999999876 8999999864211 0
Q ss_pred ------Cc-HHHHHHHH-----------HHHHhC-CCEEEeCceEEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 135 ------FD-DRLRHYAT-----------TQLSKS-GVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 135 ------~~-~~~~~~~~-----------~~l~~~-gV~v~~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
++ +.+.+.+. ..+... +++++.+...-.++..|.+++++++.+|.+|+|||.+|.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~ 149 (492)
T 3ic9_A 76 QVDRISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPN 149 (492)
T ss_dssp ECSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECC
T ss_pred CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCc
Confidence 01 11222211 112222 455666655556778888888899999999999999886
No 224
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.77 E-value=0.00021 Score=66.83 Aligned_cols=56 Identities=20% Similarity=0.229 Sum_probs=39.7
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEEC--CeE--EEcCCcEEecceEEEecCCCcchhhhhcC
Q 018671 140 RHYATTQLSKSGVRLVRG-IVKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 140 ~~~~~~~l~~~gV~v~~~-~V~~v~~--~~v--~~~~g~~i~~D~vi~a~G~~~~~~~~~~~ 196 (352)
...+.+.+++.|++++.+ +|++++. +.+ .+++| ++.+|.||+|+|.....+...++
T Consensus 156 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 156 LAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGT
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcC
Confidence 344556667789999998 7888753 344 33444 79999999999987655555544
No 225
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.77 E-value=7.4e-05 Score=69.88 Aligned_cols=92 Identities=20% Similarity=0.258 Sum_probs=63.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CC---CC----CcHHHH---------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL---SS----FDDRLR--------------- 140 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l---~~----~~~~~~--------------- 140 (352)
.+|+|||||++|+-+|..|++.+ .+|+|+|+.+ .. .. +.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G--------------~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~ 67 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG--------------IKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAF 67 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHh
Confidence 48999999999999999999887 8899998742 11 10 111111
Q ss_pred --------------------------------------------HHHHHHHHh-CCCEEEeC-ceEEEEC--C---eEEE
Q 018671 141 --------------------------------------------HYATTQLSK-SGVRLVRG-IVKDVDS--Q---KLIL 169 (352)
Q Consensus 141 --------------------------------------------~~~~~~l~~-~gV~v~~~-~V~~v~~--~---~v~~ 169 (352)
..+.+.|.+ .+..++.+ ++++++. + .|++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~ 147 (412)
T 4hb9_A 68 EEASRYIGGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFF 147 (412)
T ss_dssp HHHCEEECCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEE
T ss_pred hhhhcccCcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEE
Confidence 112222222 24456777 6777753 2 4778
Q ss_pred cCCcEEecceEEEecCCCcc
Q 018671 170 NDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 170 ~~g~~i~~D~vi~a~G~~~~ 189 (352)
+||+++.+|+||-|-|....
T Consensus 148 ~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 148 ADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp TTSCEEEESEEEECCCTTCH
T ss_pred CCCCEEEeeEEEECCCCCcc
Confidence 99999999999999998754
No 226
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.76 E-value=2.8e-05 Score=78.31 Aligned_cols=82 Identities=23% Similarity=0.341 Sum_probs=61.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CC---------CCCc--HHHHHHHHHHHHhC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL---------SSFD--DRLRHYATTQLSKS 150 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l---------~~~~--~~~~~~~~~~l~~~ 150 (352)
.++|+|||||++|+++|..|++.+ .+|+|+++.+ +. |... .+....+.+.+++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g--------------~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARG--------------HQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVT 438 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999998865 8999999863 31 1111 23445566778888
Q ss_pred CCEEEeC-ceEEEECCeEEEcCCcEE-ecceEEEecCCCcc
Q 018671 151 GVRLVRG-IVKDVDSQKLILNDGTEV-PYGLLVWSTGVGPS 189 (352)
Q Consensus 151 gV~v~~~-~V~~v~~~~v~~~~g~~i-~~D~vi~a~G~~~~ 189 (352)
||+++.+ .|+. ..+ .+|.+|+|||.+|.
T Consensus 439 gv~~~~~~~v~~-----------~~~~~~d~lviAtG~~p~ 468 (671)
T 1ps9_A 439 GVTLKLNHTVTA-----------DQLQAFDETILASGIVPR 468 (671)
T ss_dssp TCEEEESCCCCS-----------SSSCCSSEEEECCCEEEC
T ss_pred CCEEEeCcEecH-----------HHhhcCCEEEEccCCCcC
Confidence 9999988 4421 124 89999999999876
No 227
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.76 E-value=0.00018 Score=69.83 Aligned_cols=92 Identities=22% Similarity=0.255 Sum_probs=67.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC------------------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL------------------------------ 132 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l------------------------------ 132 (352)
..|+|||||++|+-+|..|++.+ .+|+++|+. ...
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~ 77 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAG--------------VEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVET 77 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCB
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccc
Confidence 48999999999999999999876 556666543 110
Q ss_pred --------------------CC---C-cHHHHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce--EEEcCCc---EEecceE
Q 018671 133 --------------------SS---F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGT---EVPYGLL 180 (352)
Q Consensus 133 --------------------~~---~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~--v~~~~g~---~i~~D~v 180 (352)
+. + ...+.+.+.+.+++.|++++.+ +|++++. +. +++.+++ ++.+|.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~v 157 (500)
T 2qa1_A 78 STQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYL 157 (500)
T ss_dssp CCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEE
T ss_pred cccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEE
Confidence 00 0 1345566677778889999999 8888853 44 4555664 7999999
Q ss_pred EEecCCCcc
Q 018671 181 VWSTGVGPS 189 (352)
Q Consensus 181 i~a~G~~~~ 189 (352)
|.|.|....
T Consensus 158 VgADG~~S~ 166 (500)
T 2qa1_A 158 VGCDGGRSS 166 (500)
T ss_dssp EECCCTTCH
T ss_pred EECCCcchH
Confidence 999998764
No 228
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.74 E-value=0.00015 Score=71.50 Aligned_cols=52 Identities=10% Similarity=0.026 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEE-C--C---eEEEc--CCc--EEecceEEEecCCCcc
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVD-S--Q---KLILN--DGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~-~--~---~v~~~--~g~--~i~~D~vi~a~G~~~~ 189 (352)
.+...+.+.+++.||+++++ +|+++. . + +|.+. +|+ ++.+|.||+|+|..+.
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 34455666777889999999 788874 2 2 35554 664 6899999999997663
No 229
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.71 E-value=0.00019 Score=72.40 Aligned_cols=56 Identities=9% Similarity=0.077 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCCc-EEecceEEEecCCCcchhhhhcCC
Q 018671 142 YATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT-EVPYGLLVWSTGVGPSTLVKSLDL 197 (352)
Q Consensus 142 ~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~-~i~~D~vi~a~G~~~~~~~~~~~l 197 (352)
.+.+.+++.|++++.+ +|+++..+ .|.+.+|+ ++.+|.||+|+|.....+....++
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~l 478 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHHL 478 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTS
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccCC
Confidence 3445556789999998 89988643 35566776 899999999999876554444443
No 230
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.71 E-value=0.00017 Score=70.40 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEEC--C----e--EEEcCC---cEEecceEEEecCCCc
Q 018671 137 DRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q----K--LILNDG---TEVPYGLLVWSTGVGP 188 (352)
Q Consensus 137 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~----~--v~~~~g---~~i~~D~vi~a~G~~~ 188 (352)
..+...+.+.+++.|++++.+ +|++++. + . +.+.++ .++.+|.||.|.|...
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 345666777788889999999 7888753 3 3 445565 6899999999999875
No 231
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.70 E-value=0.00022 Score=70.57 Aligned_cols=52 Identities=19% Similarity=0.300 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEEC--C-e---EEEc------CC---------cEEecceEEEecCCCcc
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q-K---LILN------DG---------TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~-~---v~~~------~g---------~~i~~D~vi~a~G~~~~ 189 (352)
.+.+.+.+.+++.||+++.+ +|+++.. + . |.+. +| .++.+|.||.|.|....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 45666777788889999999 7888753 2 2 5554 33 68999999999999875
No 232
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.65 E-value=0.00012 Score=67.67 Aligned_cols=57 Identities=9% Similarity=0.067 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce--EEEcCCcEEecceEEEecCCCcchhhhhcC
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~--v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~ 196 (352)
+...+.+.+++.|++++.+ +|+++.. +. |.+.+| ++.+|.||+|+|.....+...++
T Consensus 156 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 217 (381)
T 3nyc_A 156 LHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAG 217 (381)
T ss_dssp HHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhC
Confidence 3444556677889999988 7888753 33 445566 89999999999987665555444
No 233
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.64 E-value=0.00022 Score=67.10 Aligned_cols=92 Identities=22% Similarity=0.304 Sum_probs=64.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccE-EEEEeCCC-CCCC-----C---------------------
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANE-ILSS-----F--------------------- 135 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~-~l~~-----~--------------------- 135 (352)
.+|+|||||++|+.+|..|++.+ .+ |+|+|+.. ..+. +
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G--------------~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~ 70 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAG--------------IGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHS
T ss_pred CeEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhC
Confidence 38999999999999999999876 66 77777642 1100 0
Q ss_pred -----------------------------------cHHHHHHHHHHHHh-CC-CEEEeC-ceEEEEC-C--eEEEcC---
Q 018671 136 -----------------------------------DDRLRHYATTQLSK-SG-VRLVRG-IVKDVDS-Q--KLILND--- 171 (352)
Q Consensus 136 -----------------------------------~~~~~~~~~~~l~~-~g-V~v~~~-~V~~v~~-~--~v~~~~--- 171 (352)
...+.+.+.+.+.+ .| ++++.+ +|++++. + .+.+.+
T Consensus 71 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~ 150 (410)
T 3c96_A 71 IPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGH 150 (410)
T ss_dssp EEECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETT
T ss_pred CCcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCC
Confidence 01344555566655 35 688888 7877753 3 355554
Q ss_pred C--cEEecceEEEecCCCcc
Q 018671 172 G--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 172 g--~~i~~D~vi~a~G~~~~ 189 (352)
| +++.+|.||.|.|....
T Consensus 151 g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 151 GKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp SCEEEEEESEEEECCCTTCH
T ss_pred CCceEEecCEEEECCCccch
Confidence 7 57999999999998765
No 234
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.62 E-value=0.00026 Score=73.04 Aligned_cols=57 Identities=14% Similarity=0.238 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEEC--Ce---EEEcCCcEEecceEEEecCCCcchhhhhcC
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~~g~~i~~D~vi~a~G~~~~~~~~~~~ 196 (352)
+...+.+.+++.|++++.+ +|++++. +. |.+.+| ++.+|.||+|+|.....+...++
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g 215 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIG 215 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhC
Confidence 4445556677889999988 8988864 43 455666 79999999999987655544443
No 235
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.58 E-value=0.00013 Score=76.42 Aligned_cols=92 Identities=20% Similarity=0.173 Sum_probs=66.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC---CC-----C----cHHHHHHHHHHHHhC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---SS-----F----DDRLRHYATTQLSKS 150 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l---~~-----~----~~~~~~~~~~~l~~~ 150 (352)
.+|+|||+|++|+.+|..+++.+ .+|+|++.. .+. .. + ..+....+.+.+.+.
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G--------------~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~ 194 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSG--------------ARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEA 194 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHS
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhc
Confidence 47999999999999999999876 899999986 321 01 1 134445555667775
Q ss_pred -CCEEEeC-ceEEEECCe-E----------EE--------cCCcEEecceEEEecCCCcc
Q 018671 151 -GVRLVRG-IVKDVDSQK-L----------IL--------NDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 151 -gV~v~~~-~V~~v~~~~-v----------~~--------~~g~~i~~D~vi~a~G~~~~ 189 (352)
+|+++.+ +|.++..+. + .+ .++.++.+|.+|+|||..|.
T Consensus 195 ~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~ 254 (965)
T 2gag_A 195 EETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHER 254 (965)
T ss_dssp TTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEEC
T ss_pred CCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccC
Confidence 9999988 788876542 1 11 11236899999999999775
No 236
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.58 E-value=2.3e-05 Score=79.64 Aligned_cols=86 Identities=21% Similarity=0.243 Sum_probs=57.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-CCC---------CCCc--HHHHHHHHHHHHhC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------SSFD--DRLRHYATTQLSKS 150 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l---------~~~~--~~~~~~~~~~l~~~ 150 (352)
.++|+|||||++|+++|..|++.+ .+|+|+++. .+. |... ....++..+.++..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G--------------~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~ 454 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESG--------------YTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKL 454 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999876 899999986 332 1111 12333333333332
Q ss_pred ------CCEEEeCceEEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 151 ------GVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 151 ------gV~v~~~~V~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
++++..+ ..+.++++.++.+|.||+|||..|.
T Consensus 455 ~~~~~~~v~i~~~-------~~v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 455 LKKNKESQLALGQ-------KPMTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp HHHSTTCEEECSC-------CCCCHHHHHTSCCSEEEECCCEEEC
T ss_pred hcccCCceEEEeC-------eEEehhhccccCCCEEEEcCCCCcc
Confidence 4555433 1233445556889999999999853
No 237
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.52 E-value=7.4e-05 Score=69.73 Aligned_cols=83 Identities=22% Similarity=0.379 Sum_probs=61.7
Q ss_pred cEEEECCChHHHHHHHHHHHh--HhhHHHhhcCCCCCccEEEEEeCC-CC----------------------C-CC----
Q 018671 85 HCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEAN-EI----------------------L-SS---- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~--~~~~~~~~~~~~~~~~~V~lv~~~-~~----------------------l-~~---- 134 (352)
+|+|||||++|+.+|..|++. + .+|+|+|+. .. . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G--------------~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPL--------------WAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERL 67 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTT--------------SEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGG
T ss_pred eEEEECCCHHHHHHHHHHHhcCCC--------------CCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHH
Confidence 799999999999999999987 5 677777764 22 0 00
Q ss_pred ----------------------------CcHHHHHHHHHHHHhCCCEEEeC-ceEEEECCeEEEcCCcEEecceEEEecC
Q 018671 135 ----------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTG 185 (352)
Q Consensus 135 ----------------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~~~g~~i~~D~vi~a~G 185 (352)
....+.+.+.+.+++.|++++.+ +|++++.. +++.+|.||.|.|
T Consensus 68 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------~~~~ad~vV~AdG 140 (381)
T 3c4a_A 68 NPQFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------PLADYDLVVLANG 140 (381)
T ss_dssp CCEEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------CGGGCSEEEECCG
T ss_pred hhccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------ccccCCEEEECCC
Confidence 01456677777788889999988 78777542 1357999999999
Q ss_pred CCc
Q 018671 186 VGP 188 (352)
Q Consensus 186 ~~~ 188 (352)
...
T Consensus 141 ~~S 143 (381)
T 3c4a_A 141 VNH 143 (381)
T ss_dssp GGG
T ss_pred CCc
Confidence 765
No 238
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.47 E-value=5.5e-05 Score=73.28 Aligned_cols=90 Identities=21% Similarity=0.360 Sum_probs=61.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-CCC----------CC---cHHHHHHHHHHHHh
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS----------SF---DDRLRHYATTQLSK 149 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~----------~~---~~~~~~~~~~~l~~ 149 (352)
.+|+|||||++|+.+|..|++. .+|+|+++.. +.. .+ ..++...+.+.+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---------------~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~ 172 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---------------LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N 172 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---------------CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C
T ss_pred CCEEEECccHHHHHHHHHHHhc---------------CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h
Confidence 4799999999999999999753 5899999863 310 11 123333333334 5
Q ss_pred CCCEEEeC-ceEEEECC--eEEE---cCCc--EEecceEEEecCCCcc
Q 018671 150 SGVRLVRG-IVKDVDSQ--KLIL---NDGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~~--~v~~---~~g~--~i~~D~vi~a~G~~~~ 189 (352)
.+|+++.+ +|.+++.+ .+.. ++++ ++.+|.+|+|+|..|.
T Consensus 173 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 173 ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS 220 (493)
T ss_dssp TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC
T ss_pred cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc
Confidence 69998887 67766543 2322 4454 6899999999998776
No 239
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.44 E-value=0.00074 Score=63.95 Aligned_cols=55 Identities=16% Similarity=0.174 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhCCCEEEeC----ceEEEEC--Ce---EEEcCCcEEecceEEEecCCCcchhh
Q 018671 138 RLRHYATTQLSKSGVRLVRG----IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPSTLV 192 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~----~V~~v~~--~~---v~~~~g~~i~~D~vi~a~G~~~~~~~ 192 (352)
.+...+.+.+++.|++++++ +|+++.. +. |.+.+|+++.+|.||+|+|.....++
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhc
Confidence 45566667778889999987 5888753 33 67788888999999999998765543
No 240
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.41 E-value=0.00072 Score=65.50 Aligned_cols=56 Identities=14% Similarity=0.067 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEEC--C--eEEEc---CCc--EEecceEEEecCCCcchhhh
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILN---DGT--EVPYGLLVWSTGVGPSTLVK 193 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~~---~g~--~i~~D~vi~a~G~~~~~~~~ 193 (352)
.+...+.+.+.+.|++++.+ +|+++.. + .|.+. +|+ ++.+|.||.|+|.....+..
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~ 215 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHH
Confidence 34555667777889999988 7888754 2 45553 565 79999999999987765544
No 241
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.41 E-value=0.0013 Score=64.38 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhC-CCEEEeCceEEEEC--C----eEEEcCCcEEecceEEEecCCCcc
Q 018671 138 RLRHYATTQLSKS-GVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 138 ~~~~~~~~~l~~~-gV~v~~~~V~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+.+.+.+.+++. ||+++.++|++++. + .|.+++|+++.+|.||.|+|....
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 3555566667777 99999888888853 2 366778888999999999998664
No 242
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.39 E-value=0.00084 Score=65.65 Aligned_cols=91 Identities=25% Similarity=0.381 Sum_probs=64.3
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCC--------CCC----------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI--------LSS---------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~--------l~~---------------------- 134 (352)
.++|||+|+.|..+|..+++++ .+|.|||..+. +..
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G--------------~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~ 109 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHG--------------ARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSI 109 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHH
Confidence 5999999999999999999987 89999985321 100
Q ss_pred -------C---------c-H-----------HHHHHHHHHHHhCCCEEEeCceEEEECCeEEE--c----CCcEEecceE
Q 018671 135 -------F---------D-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--N----DGTEVPYGLL 180 (352)
Q Consensus 135 -------~---------~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~----~g~~i~~D~v 180 (352)
+ + + .+.......|++.||+++.+.-.-++++.|.. . +++++.+|.+
T Consensus 110 ~~~~~~~~Gi~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~i 189 (542)
T 4b1b_A 110 FKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYI 189 (542)
T ss_dssp HHHTGGGGTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEE
T ss_pred HHhhhHhcCcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeE
Confidence 0 0 0 11112234467789998877555566776654 2 3357999999
Q ss_pred EEecCCCcc
Q 018671 181 VWSTGVGPS 189 (352)
Q Consensus 181 i~a~G~~~~ 189 (352)
|+|||.+|.
T Consensus 190 iIATGs~P~ 198 (542)
T 4b1b_A 190 LIATGCRPH 198 (542)
T ss_dssp EECCCEEEC
T ss_pred EeccCCCCC
Confidence 999999886
No 243
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.34 E-value=0.001 Score=64.49 Aligned_cols=51 Identities=22% Similarity=0.150 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEECC------eEEEc-CCc--EEecc-eEEEecCCCc
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ------KLILN-DGT--EVPYG-LLVWSTGVGP 188 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~~------~v~~~-~g~--~i~~D-~vi~a~G~~~ 188 (352)
.+.+.+.+.+++.||+++++ +|+++..+ +|.+. +++ ++.+| .||+|+|...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 44555666777889999999 78887532 35554 343 58996 9999999765
No 244
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.34 E-value=0.0011 Score=64.72 Aligned_cols=50 Identities=24% Similarity=0.306 Sum_probs=37.7
Q ss_pred HHHHHHHHHh-CCCEEEeCceEEEEC--C----eEEEcCCcEEecceEEEecCCCcc
Q 018671 140 RHYATTQLSK-SGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 140 ~~~~~~~l~~-~gV~v~~~~V~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+.+.+.+++ .||+++.++|++++. + .|.+++|+++.+|.||.|+|....
T Consensus 178 ~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 178 SQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3444555667 899999888888853 2 356678778999999999998654
No 245
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.33 E-value=0.0016 Score=63.00 Aligned_cols=52 Identities=23% Similarity=0.222 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEC--C----eEEEcCCcEEecceEEEecCCCcc
Q 018671 138 RLRHYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~~V~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+.+.+.+.+++.||+++.++|++++. + .|.+++|+++.+|.||.|+|....
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 445556666677899998888888763 2 366778888999999999998654
No 246
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.28 E-value=0.001 Score=63.98 Aligned_cols=49 Identities=16% Similarity=0.265 Sum_probs=34.5
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEE--CCeE---EEc-CCcEEecceEEEecCCCcc
Q 018671 140 RHYATTQLSKSGVRLVRG-IVKDVD--SQKL---ILN-DGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 140 ~~~~~~~l~~~gV~v~~~-~V~~v~--~~~v---~~~-~g~~i~~D~vi~a~G~~~~ 189 (352)
...+.+.+++.||+++.+ +| ++. ++.+ .+. ++.++.+|.||+|+|..+.
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 344555566789999998 68 874 3433 443 3335789999999998876
No 247
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.24 E-value=0.00088 Score=65.85 Aligned_cols=58 Identities=14% Similarity=0.011 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEEC--C---eEEEcC---C--cEEecceEEEecCCCcchhhhhcC
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILND---G--TEVPYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~~v~~--~---~v~~~~---g--~~i~~D~vi~a~G~~~~~~~~~~~ 196 (352)
+...+.+.+.+.|++++.+ +|+++.. + +|.+.+ | .++.+|.||.|+|.....+....+
T Consensus 172 l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g 240 (561)
T 3da1_A 172 LTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDR 240 (561)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcC
Confidence 4444556677889999998 8888753 3 355543 3 478999999999987655555444
No 248
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.14 E-value=0.0011 Score=66.30 Aligned_cols=53 Identities=19% Similarity=0.182 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhCCC--EEEeC-ceEEEECC--------eEEEc------CC--cEEecceEEEecCCCcc
Q 018671 137 DRLRHYATTQLSKSGV--RLVRG-IVKDVDSQ--------KLILN------DG--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 137 ~~~~~~~~~~l~~~gV--~v~~~-~V~~v~~~--------~v~~~------~g--~~i~~D~vi~a~G~~~~ 189 (352)
..+.+.+.+.+++.|+ +++.+ +|++++.+ .|++. +| +++.+|.||.|.|....
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 3566777788888877 89888 78887532 24444 46 57999999999998764
No 249
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.00 E-value=0.0037 Score=61.17 Aligned_cols=49 Identities=16% Similarity=0.225 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEECC--e--EEEcC---C--cEEecceEEEecCCCcc
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K--LILND---G--TEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~--v~~~~---g--~~i~~D~vi~a~G~~~~ 189 (352)
.+.+.+.+.+++. ++.+ +|++++.+ . +++.+ | +++.+|.||.|.|....
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 4455566666665 7777 78887543 3 44544 6 47999999999998653
No 250
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.95 E-value=0.0021 Score=62.19 Aligned_cols=105 Identities=13% Similarity=0.129 Sum_probs=64.5
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC-C-------CCC----------------------
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I-------LSS---------------------- 134 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~-------l~~---------------------- 134 (352)
.|+|||+|++|+.+|..|.+.+...+..............++|+.+ + +|.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999999998765322111111111223455555431 1 110
Q ss_pred ----------------------CcHHHHHHHHHHHHhCCCEEEeC-ceEEEECC------------eEEEcCC-----cE
Q 018671 135 ----------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ------------KLILNDG-----TE 174 (352)
Q Consensus 135 ----------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~------------~v~~~~g-----~~ 174 (352)
...++.+++....++.+..+..+ +|++|+.. .|+..++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 01345666666666777778888 78888531 3444433 36
Q ss_pred EecceEEEecCCCcc
Q 018671 175 VPYGLLVWSTGVGPS 189 (352)
Q Consensus 175 i~~D~vi~a~G~~~~ 189 (352)
+.++.||+|+|..|.
T Consensus 201 ~~ar~vVlatG~~P~ 215 (501)
T 4b63_A 201 RRTRKVVIAIGGTAK 215 (501)
T ss_dssp EEEEEEEECCCCEEC
T ss_pred EEeCEEEECcCCCCC
Confidence 889999999998765
No 251
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.66 E-value=0.0012 Score=56.87 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.|+|||||++|+.+|..|++.+ .+|+|+|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G--------------~~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECC
Confidence 6999999999999999999987 899999976
No 252
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.65 E-value=0.00097 Score=62.91 Aligned_cols=85 Identities=14% Similarity=0.152 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecC--------CCcc-hh--hhhcCCCCCCC
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTG--------VGPS-TL--VKSLDLPKSPG 202 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G--------~~~~-~~--~~~~~l~~~~~ 202 (352)
....+...+++.| +++++ +|++|+.+ .|.+.+|+++.+|.||+|+| +.|+ +. ...+.... ..
T Consensus 206 ~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~-~~ 283 (431)
T 3k7m_X 206 SADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGH-GG 283 (431)
T ss_dssp THHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCC-CC
T ss_pred HHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCC-Cc
Confidence 3445555566678 99999 89999753 35667888899999999999 6665 21 11111111 22
Q ss_pred CccccCCccccCCCCCEEEEcccc
Q 018671 203 GRIGIDEWLRVPSVQDVFAVGDCS 226 (352)
Q Consensus 203 G~i~Vd~~l~~~~~~~IfaiGD~a 226 (352)
..++|+..+++ ..++||+.||+.
T Consensus 284 ~~~kv~~~~~~-~~~~i~~~~d~~ 306 (431)
T 3k7m_X 284 QGLKILIHVRG-AEAGIECVGDGI 306 (431)
T ss_dssp CEEEEEEEEES-CCTTEEEEBSSS
T ss_pred ceEEEEEEECC-CCcCceEcCCCC
Confidence 34889988888 679999999984
No 253
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.58 E-value=0.011 Score=58.00 Aligned_cols=55 Identities=11% Similarity=0.047 Sum_probs=37.8
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEEC--Ce---EEEc---CCc--EEecceEEEecCCCcchhhhh
Q 018671 140 RHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILN---DGT--EVPYGLLVWSTGVGPSTLVKS 194 (352)
Q Consensus 140 ~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~---~g~--~i~~D~vi~a~G~~~~~~~~~ 194 (352)
...+.+.+.+.|++++.+ +|+++.. +. |.+. +|+ ++.+|.||.|+|.-...+...
T Consensus 191 ~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~ 256 (571)
T 2rgh_A 191 VIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNL 256 (571)
T ss_dssp HHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTT
T ss_pred HHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHh
Confidence 334445566789999988 7888753 33 4543 343 699999999999766555443
No 254
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.58 E-value=0.0092 Score=59.81 Aligned_cols=20 Identities=35% Similarity=0.697 Sum_probs=19.4
Q ss_pred cEEEECCChHHHHHHHHHHH
Q 018671 85 HCVVVGGGPTGVEFSGELSD 104 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~ 104 (352)
.|+|||||++|+-+|..|++
T Consensus 10 dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred cEEEECcCHHHHHHHHHHhc
Confidence 79999999999999999998
No 255
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.45 E-value=0.012 Score=58.31 Aligned_cols=50 Identities=18% Similarity=0.190 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCC-CEEEeC-ceEEEE--CCe---EEE---cCCc--EEecceEEEecCCCc
Q 018671 139 LRHYATTQLSKSG-VRLVRG-IVKDVD--SQK---LIL---NDGT--EVPYGLLVWSTGVGP 188 (352)
Q Consensus 139 ~~~~~~~~l~~~g-V~v~~~-~V~~v~--~~~---v~~---~~g~--~i~~D~vi~a~G~~~ 188 (352)
+...+.+.+.+.| |+++.+ .|.++. ++. |.. .+|+ ++.++.||+|+|...
T Consensus 136 l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 136 MLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 4444555566677 999998 787774 332 332 5676 689999999999754
No 256
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.44 E-value=0.025 Score=55.76 Aligned_cols=51 Identities=18% Similarity=0.049 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEEC---C---eEEE---cCCc--EEecceEEEecCCCcc
Q 018671 139 LRHYATTQLSKSGVRLVRG-IVKDVDS---Q---KLIL---NDGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 139 ~~~~~~~~l~~~gV~v~~~-~V~~v~~---~---~v~~---~~g~--~i~~D~vi~a~G~~~~ 189 (352)
+...+.+.+++.||+++.+ .|+++.. + +|.. .+|+ ++.++.||+|+|....
T Consensus 145 l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 145 LLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 3344555666789999999 7888752 2 2443 4565 5899999999997543
No 257
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.32 E-value=0.03 Score=57.06 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=29.9
Q ss_pred CCCEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecCC
Q 018671 150 SGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~ 186 (352)
.|++|+++ +|++|+.+ .|.+.+|+++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 37889999 89999753 456678889999999999953
No 258
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.25 E-value=0.0084 Score=58.55 Aligned_cols=30 Identities=20% Similarity=0.502 Sum_probs=26.7
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.|+|||+|.+|+.+|..+++ + .+|+|+++.
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G--------------~~V~vlEk~ 39 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-Q--------------HQVIVLSKG 39 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-T--------------SCEEEECSS
T ss_pred CEEEECccHHHHHHHHHHhc-C--------------CcEEEEECC
Confidence 79999999999999999987 6 778888775
No 259
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.92 E-value=0.036 Score=54.99 Aligned_cols=50 Identities=18% Similarity=0.051 Sum_probs=34.0
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEE--CC---eEEE---cCCc--EEecceEEEecCCCcc
Q 018671 140 RHYATTQLSKSGVRLVRG-IVKDVD--SQ---KLIL---NDGT--EVPYGLLVWSTGVGPS 189 (352)
Q Consensus 140 ~~~~~~~l~~~gV~v~~~-~V~~v~--~~---~v~~---~~g~--~i~~D~vi~a~G~~~~ 189 (352)
...+.+.+.+.||+++.+ .|.++. ++ +|.. .+|+ .+.++.||+|+|....
T Consensus 158 ~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 158 LHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 334444555678999988 777764 33 3444 3665 6899999999997653
No 260
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.80 E-value=0.0055 Score=58.93 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=32.6
Q ss_pred HHhCCCEEEeC-ceEEEEC--C---eEEEcCCcEEecceEEEecCCC
Q 018671 147 LSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 147 l~~~gV~v~~~-~V~~v~~--~---~v~~~~g~~i~~D~vi~a~G~~ 187 (352)
+++.|++|+++ +|++|.. + +|+++||+++.+|.||.+++..
T Consensus 231 ~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 231 FQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred HHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 44678999999 8999853 3 4788999999999999987654
No 261
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.47 E-value=0.0096 Score=51.00 Aligned_cols=106 Identities=16% Similarity=0.087 Sum_probs=64.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEE
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 162 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 162 (352)
+++|+|||||.+|...|..|.+.+ .+|+++++. ..+++ .+...+.+|+++.....
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~G--------------A~VtVvap~-----~~~~l----~~l~~~~~i~~i~~~~~-- 85 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEG--------------AAITVVAPT-----VSAEI----NEWEAKGQLRVKRKKVG-- 85 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGC--------------CCEEEECSS-----CCHHH----HHHHHTTSCEEECSCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEECCC-----CCHHH----HHHHHcCCcEEEECCCC--
Confidence 469999999999999999998876 899999853 33443 33334456776644211
Q ss_pred ECCeEEEcCCcEEecceEEEecCCCcc-hhhhhcCCCCCCCCccccCC----ccccCCCCCEEEEcccc
Q 018671 163 DSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDE----WLRVPSVQDVFAVGDCS 226 (352)
Q Consensus 163 ~~~~v~~~~g~~i~~D~vi~a~G~~~~-~~~~~~~l~~~~~G~i~Vd~----~l~~~~~~~IfaiGD~a 226 (352)
+ +.--.+|+||.||+.... ..+.... +. ++.||- .+..--.|-++--||..
T Consensus 86 -~-------~dL~~adLVIaAT~d~~~N~~I~~~a----k~-gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 86 -E-------EDLLNVFFIVVATNDQAVNKFVKQHI----KN-DQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp -G-------GGSSSCSEEEECCCCTHHHHHHHHHS----CT-TCEEEC-----CCSEECCEEEEETTEE
T ss_pred -H-------hHhCCCCEEEECCCCHHHHHHHHHHH----hC-CCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 1 111138999999998764 3333321 11 344442 22222356677777754
No 262
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.40 E-value=0.03 Score=50.81 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=53.3
Q ss_pred CCcEEEECCChHHHH-HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceE
Q 018671 83 LLHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 160 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e-~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 160 (352)
.++|.|||.|.+|+. +|..|.+.+ .+|++.|.....+ ..+.|++.||+++.+ ...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G--------------~~V~~~D~~~~~~---------~~~~L~~~gi~v~~g~~~~ 60 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG--------------FEVSGCDAKMYPP---------MSTQLEALGIDVYEGFDAA 60 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT--------------CEEEEEESSCCTT---------HHHHHHHTTCEEEESCCGG
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC--------------CEEEEEcCCCCcH---------HHHHHHhCCCEEECCCCHH
Confidence 358999999999997 788888877 8999999753211 235678889998765 211
Q ss_pred EEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 161 DVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 161 ~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
. +.. -.+|.||.++|..+.
T Consensus 61 ~-------l~~---~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 61 Q-------LDE---FKADVYVIGNVAKRG 79 (326)
T ss_dssp G-------GGS---CCCSEEEECTTCCTT
T ss_pred H-------cCC---CCCCEEEECCCcCCC
Confidence 1 110 138999999999875
No 263
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=95.09 E-value=0.016 Score=54.78 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|+|||||++|+.+|..|++.+ .+|+|+|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G--------------~~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHD--------------VDVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CeEEEEcCC
Confidence 48999999999999999999987 899999975
No 264
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.07 E-value=0.025 Score=53.91 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=54.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEE
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 162 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 162 (352)
.++|.|||.|.+|+.+|..|.+.+ .+|+..+..... .+ ...+.|++.||+++.+.-
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G--------------~~V~~~D~~~~~--~~-----~~~~~L~~~gi~~~~g~~--- 64 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLG--------------AIVTVNDGKPFD--EN-----PTAQSLLEEGIKVVCGSH--- 64 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTT--------------CEEEEEESSCGG--GC-----HHHHHHHHTTCEEEESCC---
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--------------CEEEEEeCCccc--CC-----hHHHHHHhCCCEEEECCC---
Confidence 469999999999999999999887 899999975311 01 223568888999887621
Q ss_pred ECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 163 DSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 163 ~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
++.+ +. + .+|.||.++|..+.
T Consensus 65 -~~~~-~~-~---~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 65 -PLEL-LD-E---DFCYMIKNPGIPYN 85 (451)
T ss_dssp -CGGG-GG-S---CEEEEEECTTSCTT
T ss_pred -hHHh-hc-C---CCCEEEECCcCCCC
Confidence 0000 01 0 17999999999875
No 265
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.80 E-value=0.034 Score=53.32 Aligned_cols=33 Identities=33% Similarity=0.402 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..+|+|||||.+|+.+|..|++.+ .+|+++|+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g--------------~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAG--------------HQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHT--------------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 358999999999999999999877 899999985
No 266
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.71 E-value=0.026 Score=52.88 Aligned_cols=44 Identities=14% Similarity=0.289 Sum_probs=34.9
Q ss_pred HHHhCCCEEEeC-ceEEEECC--eEEEcCCcEEecceEEEecCCCcc
Q 018671 146 QLSKSGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 146 ~l~~~gV~v~~~-~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
.+++.|++++++ +|++|+.+ +++..+|+++.+|.||+|+|....
T Consensus 198 ~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 198 IIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHHH
T ss_pred HHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHHH
Confidence 345679999999 89999753 555567889999999999997543
No 267
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.57 E-value=0.028 Score=52.54 Aligned_cols=45 Identities=22% Similarity=0.261 Sum_probs=33.3
Q ss_pred HHHHhCCCEEEeC-ceEEEEC--CeE--EEcCCcEEecceEEEecCCCcc
Q 018671 145 TQLSKSGVRLVRG-IVKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 145 ~~l~~~gV~v~~~-~V~~v~~--~~v--~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+.+++.|++++++ +|++|.. +.+ ...+|+++.+|.||+|+|....
T Consensus 204 ~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 204 TVISANGGKIHTGQEVSKILIENGKAAGIIADDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECSCHHHH
T ss_pred HHHHHcCCEEEECCceeEEEEECCEEEEEEECCEEEECCEEEECCCHHHH
Confidence 3455679999999 8998864 333 2235788999999999987543
No 268
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.44 E-value=0.039 Score=50.47 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=29.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..|+|||||.+|+.+|.+|++.+ .+|+|+|+.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G--------------~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKG--------------YSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CEEEEEecc
Confidence 38999999999999999999876 899999974
No 269
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=94.33 E-value=0.036 Score=51.65 Aligned_cols=32 Identities=31% Similarity=0.322 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+.|+|||||.+|+++|..+++.+ .+|+|++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G--------------~~V~liE~~ 33 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLG--------------VPVRLFEMR 33 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCT
T ss_pred CCEEEECchHHHHHHHHHHHHCC--------------CcEEEEecc
Confidence 37999999999999999999987 899999863
No 270
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.04 E-value=0.047 Score=50.62 Aligned_cols=34 Identities=29% Similarity=0.335 Sum_probs=30.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+..+|+|||||.+|+-+|..|.+.+ .+|+|+|+.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G--------------~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAG--------------HDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTS--------------CEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--------------CcEEEEecc
Confidence 3469999999999999999999876 899999976
No 271
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=94.04 E-value=0.035 Score=52.84 Aligned_cols=32 Identities=38% Similarity=0.481 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc--EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~--~V~lv~~~ 129 (352)
++|+|||||.+|+.+|..|++.+ . +|+|+|+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G--------------~~~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAP--------------CPPKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSS--------------SCCEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCC--------------CCCcEEEEeCC
Confidence 38999999999999999999876 5 78888763
No 272
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=93.97 E-value=0.042 Score=52.74 Aligned_cols=38 Identities=32% Similarity=0.431 Sum_probs=31.1
Q ss_pred hCCCEEEeC-ceEEEECC--eEEEcCCcEEecceEEEecCC
Q 018671 149 KSGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 149 ~~gV~v~~~-~V~~v~~~--~v~~~~g~~i~~D~vi~a~G~ 186 (352)
+.|++++++ +|++|+.+ .+++.+|+++.||.||.+...
T Consensus 234 ~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 234 KEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp GGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSCH
T ss_pred hcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCCH
Confidence 346778888 79998764 788999999999999998763
No 273
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.83 E-value=0.045 Score=51.28 Aligned_cols=31 Identities=32% Similarity=0.551 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.|+|||||.+|+.+|..|++.+ .+|+|+|+.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G--------------~~V~vlE~~ 33 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAG--------------KKVLLLEGG 33 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHcC--------------CeEEEEecC
Confidence 7999999999999999999987 899999974
No 274
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.64 E-value=0.062 Score=51.38 Aligned_cols=32 Identities=41% Similarity=0.534 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||.+|+.+|..|++.+ .+|+|+|+.
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~g--------------~~v~v~E~~ 43 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKAG--------------YKVTVLEAR 43 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecc
Confidence 58999999999999999999876 789999875
No 275
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=93.48 E-value=0.058 Score=52.07 Aligned_cols=37 Identities=11% Similarity=-0.056 Sum_probs=29.4
Q ss_pred CCEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecCCC
Q 018671 151 GVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 151 gV~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~ 187 (352)
|++++++ +|++|+.+ .|.+.+|+++.+|.||++++..
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGG
T ss_pred CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHH
Confidence 5678888 79998753 3566788899999999999864
No 276
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=93.22 E-value=0.088 Score=47.84 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.|+|||||.+|+.+|.+|++.+... .+..+|+|+|+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~--------~p~~~V~vlE~~ 38 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSV--------LQPLDIKVYADR 38 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTT--------SSSCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHhcccc--------CCCceEEEEECC
Confidence 7999999999999999999864100 012689999976
No 277
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.17 E-value=0.068 Score=50.75 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
..|+|||+|.+|+-+|..|++.+ .+|+++|+++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G--------------~~V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDG--------------KKVLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeCCC
Confidence 48999999999999999999877 8999999974
No 278
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.14 E-value=0.14 Score=48.86 Aligned_cols=9 Identities=33% Similarity=0.246 Sum_probs=5.6
Q ss_pred CCeEeecHH
Q 018671 305 KGLSLAGFL 313 (352)
Q Consensus 305 ~~~~~~G~~ 313 (352)
.++.+.|-.
T Consensus 458 ~gLyl~G~~ 466 (501)
T 4dgk_A 458 TNLYLVGAG 466 (501)
T ss_dssp TTEEECCCH
T ss_pred CCEEEECCC
Confidence 467777743
No 279
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.13 E-value=0.095 Score=44.60 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=30.8
Q ss_pred CCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 215 SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 215 ~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+.++||++||++. ....+.|+..|+.+|+.|...++
T Consensus 293 ~~~~v~l~GDa~~----------g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 293 ADLGIYVCGDWCL----------SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTTEEECCGGGT----------TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecccC----------CcCHHHHHHHHHHHHHHHHHHhh
Confidence 5789999999875 33578999999999999998776
No 280
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.07 E-value=0.33 Score=43.64 Aligned_cols=83 Identities=14% Similarity=0.182 Sum_probs=53.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEe-C--ceE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVR-G--IVK 160 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~-~--~V~ 160 (352)
.+|+|||+|..|.-+|..|++.+ .+|+++.+.+ . +.+++.|+.+.. . ...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g--------------~~V~~~~r~~--------~-----~~i~~~Gl~~~~~~~g~~~ 55 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG--------------HCVSVVSRSD--------Y-----ETVKAKGIRIRSATLGDYT 55 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT--------------CEEEEECSTT--------H-----HHHHHHCEEEEETTTCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--------------CeEEEEeCCh--------H-----HHHHhCCcEEeecCCCcEE
Confidence 38999999999999999998866 7999998632 1 445666776654 1 221
Q ss_pred EEECCeEEEcCCc-EE-ecceEEEecCCCcc-hhhhhc
Q 018671 161 DVDSQKLILNDGT-EV-PYGLLVWSTGVGPS-TLVKSL 195 (352)
Q Consensus 161 ~v~~~~v~~~~g~-~i-~~D~vi~a~G~~~~-~~~~~~ 195 (352)
+.+-.+. .+-+ .. ++|.||+|+..... ..++.+
T Consensus 56 -~~~~~~~-~~~~~~~~~~DlVilavK~~~~~~~l~~l 91 (320)
T 3i83_A 56 -FRPAAVV-RSAAELETKPDCTLLCIKVVEGADRVGLL 91 (320)
T ss_dssp -ECCSCEE-SCGGGCSSCCSEEEECCCCCTTCCHHHHH
T ss_pred -EeeeeeE-CCHHHcCCCCCEEEEecCCCChHHHHHHH
Confidence 1111221 2222 22 69999999987665 344443
No 281
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.97 E-value=0.13 Score=40.87 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=29.7
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
...+|+|+|+|..|..+|..|...+ .+|+++++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g--------------~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSG--------------HSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 3469999999999999999998866 799999875
No 282
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.61 E-value=0.084 Score=49.79 Aligned_cols=32 Identities=31% Similarity=0.521 Sum_probs=26.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||.+|+.+|..|++.+ .+|+++|+.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g--------------~~v~v~E~~ 37 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAG--------------LSVAVIEAR 37 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CcEEEEECC
Confidence 38999999999999999999876 667777653
No 283
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.60 E-value=0.077 Score=50.45 Aligned_cols=32 Identities=28% Similarity=0.491 Sum_probs=28.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||.+|+-+|..|++.+ .+|+++|+.
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~g--------------~~v~v~E~~ 48 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSRG--------------TDAVLLESS 48 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTTT--------------CCEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEcC
Confidence 48999999999999999999876 778888765
No 284
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=92.33 E-value=0.1 Score=50.01 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||.+|+.+|..|++.+ .+|+++|+.
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~g--------------~~v~v~E~~ 45 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIHG--------------LNVTVFEAE 45 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTS--------------CEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--------------CcEEEEEeC
Confidence 58999999999999999998866 789999876
No 285
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=92.29 E-value=0.11 Score=48.43 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=28.4
Q ss_pred CcEEEECCChHHHHHHHHHHHh-HhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~-~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||.+|+-+|..|++. + .+|+++|+.
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g--------------~~v~v~E~~ 40 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLD--------------KRVLVLERR 40 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSC--------------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCC--------------CCEEEEeCC
Confidence 4899999999999999999986 5 788999876
No 286
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.28 E-value=0.12 Score=48.00 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=28.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||.+|+.+|..|++.+ .+|+++|+.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g--------------~~v~v~E~~ 35 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKG--------------HQVHIIDQR 35 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEEec
Confidence 38999999999999999998765 789999976
No 287
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.17 E-value=0.1 Score=49.20 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=28.7
Q ss_pred CEEEeC-ceEEEECC----eEEEcCCcEEecceEEEecCCC
Q 018671 152 VRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 152 V~v~~~-~V~~v~~~----~v~~~~g~~i~~D~vi~a~G~~ 187 (352)
++++++ +|++|+.+ .|.+++|+++.+|.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHH
Confidence 478888 79988653 4667789889999999998753
No 288
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=92.04 E-value=0.12 Score=50.49 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=40.1
Q ss_pred ccccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 204 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 204 ~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+|..|+++++.+.+++|++||++.+ ......|...|..+|+.|...+.
T Consensus 496 ri~~~~~~~~~~~~gly~~GegaG~---------a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 496 CIKRGKDFQSVNLKGFYPAGEGAGY---------AGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp ECCCTTTTSCTTCBTEEECHHHHTS---------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCceECCcCCEEEccccCCh---------hhHHHHHHHHHHHHHHHHHHHhh
Confidence 4788999998889999999999964 55577888899999998877654
No 289
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=92.02 E-value=0.11 Score=48.38 Aligned_cols=32 Identities=19% Similarity=0.361 Sum_probs=28.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||++|+.+|..|++.+ .+|+++++.
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~g--------------~~v~v~E~~ 61 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASSG--------------QRVLIVDRR 61 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHHHCC--------------CceEEEecc
Confidence 48999999999999999998866 789999875
No 290
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=91.96 E-value=0.17 Score=48.60 Aligned_cols=72 Identities=18% Similarity=0.242 Sum_probs=52.8
Q ss_pred cCCcEEEECCChHHHH-HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ce
Q 018671 82 RLLHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 159 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e-~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 159 (352)
+.++|.|||-|-+|+. +|..|.+.+ .+|+..+... ++ ..+.|++.||++..+ ..
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G--------------~~V~~~D~~~-----~~-----~~~~l~~~gi~~~~g~~~ 76 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEG--------------YQISGSDLAP-----NS-----VTQHLTALGAQIYFHHRP 76 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTT--------------CEEEEECSSC-----CH-----HHHHHHHTTCEEESSCCG
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCC--------------CeEEEEECCC-----CH-----HHHHHHHCCCEEECCCCH
Confidence 3469999999999997 788888887 8999998642 11 235688889998866 11
Q ss_pred EEEECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 160 KDVDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 160 ~~v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+. + -.+|+||..+|..+.
T Consensus 77 -----~~--~-----~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 77 -----EN--V-----LDASVVVVSTAISAD 94 (494)
T ss_dssp -----GG--G-----TTCSEEEECTTSCTT
T ss_pred -----HH--c-----CCCCEEEECCCCCCC
Confidence 11 1 138999999999875
No 291
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.85 E-value=0.18 Score=48.05 Aligned_cols=73 Identities=19% Similarity=0.163 Sum_probs=50.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEE
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 162 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 162 (352)
+++|+|||||.+|...+..|.+.+ .+|+++++. ..+++ .+...+.+|+++.+...
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~g--------------a~V~vi~~~-----~~~~~----~~l~~~~~i~~~~~~~~-- 66 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAG--------------ARLTVNALT-----FIPQF----TVWANEGMLTLVEGPFD-- 66 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--------------BEEEEEESS-----CCHHH----HHHHTTTSCEEEESSCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc--------------CEEEEEcCC-----CCHHH----HHHHhcCCEEEEECCCC--
Confidence 369999999999999999999877 899999863 23333 22233456777654211
Q ss_pred ECCeEEEcCCcEEecceEEEecCCCc
Q 018671 163 DSQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 163 ~~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
+ +.--.+|+||.+||...
T Consensus 67 -~-------~~l~~~~lVi~at~~~~ 84 (457)
T 1pjq_A 67 -E-------TLLDSCWLAIAATDDDT 84 (457)
T ss_dssp -G-------GGGTTCSEEEECCSCHH
T ss_pred -c-------cccCCccEEEEcCCCHH
Confidence 1 10014899999999874
No 292
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=91.68 E-value=0.16 Score=47.40 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=27.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||.+|+.+|..|++.+ ..+|+++|+.
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~g-------------~~~v~v~E~~ 39 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQAG-------------FHDYTILERT 39 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-------------CCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCC-------------CCcEEEEECC
Confidence 48999999999999999998753 0578999875
No 293
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.62 E-value=0.12 Score=49.47 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=28.8
Q ss_pred hCC-CEEEeC-ceEEEEC--C--eEEEcCCcEEecceEEEecCCC
Q 018671 149 KSG-VRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 149 ~~g-V~v~~~-~V~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~ 187 (352)
+.| ++++++ +|++|+. + .|.+.+|+++.+|.||+|+|..
T Consensus 267 ~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 267 GTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp TTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred hcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 345 778888 7888863 2 3555677789999999999853
No 294
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=91.44 E-value=0.17 Score=50.62 Aligned_cols=35 Identities=29% Similarity=0.546 Sum_probs=29.8
Q ss_pred ccCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 81 ~~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
...++|+|||+|++|+.+|..|++.+ .+|+++|+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g--------------~~v~~~e~~ 139 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFG--------------MDVTLLEAR 139 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCC--------------CeEEEEecC
Confidence 34579999999999999999999876 778888764
No 295
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=91.42 E-value=0.12 Score=47.47 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+|+|||||.+|+-+|..|++.+ .+|+++|+.
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g--------------~~v~v~E~~ 33 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLN--------------KKVLVIEKR 33 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGT--------------CCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCC--------------CcEEEEecC
Confidence 7999999999999999998865 788888875
No 296
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=91.32 E-value=0.17 Score=47.95 Aligned_cols=34 Identities=32% Similarity=0.430 Sum_probs=28.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||.+|+.+|..|++.+ ++.+|+++|+.
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g------------~~~~v~v~E~~ 38 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAF------------PDLNITLLEAG 38 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHC------------TTSEEEEECSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhC------------CCCCEEEEECC
Confidence 38999999999999999999865 12688888874
No 297
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=91.31 E-value=0.22 Score=51.13 Aligned_cols=34 Identities=29% Similarity=0.561 Sum_probs=30.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..++|+|||+|++|+.+|..|++.+ .+|+|+++.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g--------------~~v~v~E~~ 310 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFG--------------MDVTLLEAR 310 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--------------CcEEEEEec
Confidence 4568999999999999999999876 789999875
No 298
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=91.20 E-value=0.52 Score=43.85 Aligned_cols=9 Identities=22% Similarity=-0.053 Sum_probs=4.1
Q ss_pred ECCeEEEcC
Q 018671 163 DSQKLILND 171 (352)
Q Consensus 163 ~~~~v~~~~ 171 (352)
..+.|++.-
T Consensus 231 ~ad~Vv~a~ 239 (421)
T 3nrn_A 231 SFDVAISNV 239 (421)
T ss_dssp ECSEEEECS
T ss_pred EeCEEEECC
Confidence 344555543
No 299
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.14 E-value=0.25 Score=39.11 Aligned_cols=80 Identities=14% Similarity=0.035 Sum_probs=48.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
++++|+|+|..|..+|..|.+.+ .+|+++++.. ++..+.+.+ ....|+.++.+...+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g--------------~~V~vid~~~------~~~~~~~~~-~~~~~~~~i~gd~~~-- 60 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG--------------QNVTVISNLP------EDDIKQLEQ-RLGDNADVIPGDSND-- 60 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCC------HHHHHHHHH-HHCTTCEEEESCTTS--
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--------------CCEEEEECCC------hHHHHHHHH-hhcCCCeEEEcCCCC--
Confidence 48999999999999999998866 8999998631 222222222 223467766542110
Q ss_pred CCeEEEcCCcEEecceEEEecCCCc
Q 018671 164 SQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 164 ~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
.+. +..-..-.+|.+|.+++...
T Consensus 61 ~~~--l~~a~i~~ad~vi~~~~~d~ 83 (153)
T 1id1_A 61 SSV--LKKAGIDRCRAILALSDNDA 83 (153)
T ss_dssp HHH--HHHHTTTTCSEEEECSSCHH
T ss_pred HHH--HHHcChhhCCEEEEecCChH
Confidence 000 11000114899999998654
No 300
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=91.13 E-value=0.2 Score=49.59 Aligned_cols=34 Identities=32% Similarity=0.551 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL 132 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l 132 (352)
.|+|||||++|+.+|.+|++.+ .+|+++++....
T Consensus 48 dvvIIG~G~aGl~aA~~l~~~G--------------~~V~liE~~~~~ 81 (623)
T 3pl8_A 48 DVVIVGSGPIGCTYARELVGAG--------------YKVAMFDIGEID 81 (623)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCCC
T ss_pred CEEEECCcHHHHHHHHHHHhCC--------------CcEEEEeccCCC
Confidence 7999999999999999999876 899999986433
No 301
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=91.08 E-value=0.17 Score=47.63 Aligned_cols=52 Identities=29% Similarity=0.360 Sum_probs=38.1
Q ss_pred HHHHHhCCCEEEeC-ceEEEEC----------------C----eEEEcCCcEE--ecceEEEecCCCcchhhhhcC
Q 018671 144 TTQLSKSGVRLVRG-IVKDVDS----------------Q----KLILNDGTEV--PYGLLVWSTGVGPSTLVKSLD 196 (352)
Q Consensus 144 ~~~l~~~gV~v~~~-~V~~v~~----------------~----~v~~~~g~~i--~~D~vi~a~G~~~~~~~~~~~ 196 (352)
.+.+++.|++++.+ +|+++.. + .|.+.+| ++ .+|.||+|+|.....+...++
T Consensus 188 ~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~~l~~~~g 262 (448)
T 3axb_A 188 YRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSNRLLNPLG 262 (448)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHHHHHGGGT
T ss_pred HHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHHHHHHHcC
Confidence 34455789999998 8988864 2 2556677 68 999999999987665655544
No 302
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.07 E-value=0.28 Score=37.65 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+|+|+|+|..|..+|..|.+.+ .+|+++++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g--------------~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG--------------HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEC
Confidence 48999999999999999998765 78999986
No 303
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.90 E-value=0.37 Score=43.14 Aligned_cols=77 Identities=21% Similarity=0.304 Sum_probs=48.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
.+|+|||+|..|.-+|..|+ .+ .+|+++.+.. +. .+.+++.|+.+.........
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g--------------~~V~~~~r~~-------~~----~~~l~~~G~~~~~~~~~~~~ 56 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LY--------------HDVTVVTRRQ-------EQ----AAAIQSEGIRLYKGGEEFRA 56 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT--------------SEEEEECSCH-------HH----HHHHHHHCEEEEETTEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHh-cC--------------CceEEEECCH-------HH----HHHHHhCCceEecCCCeecc
Confidence 38999999999999999998 55 7999998631 11 23455668876643111111
Q ss_pred CCeEEEcCCcEEecceEEEecCCCc
Q 018671 164 SQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 164 ~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
. +.......-++|.||+|+-...
T Consensus 57 ~--~~~~~~~~~~~D~vilavK~~~ 79 (307)
T 3ego_A 57 D--CSADTSINSDFDLLVVTVKQHQ 79 (307)
T ss_dssp C--CEEESSCCSCCSEEEECCCGGG
T ss_pred c--ccccccccCCCCEEEEEeCHHH
Confidence 1 1111111125899999986543
No 304
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.89 E-value=0.38 Score=45.16 Aligned_cols=10 Identities=30% Similarity=0.723 Sum_probs=5.7
Q ss_pred eCCEEEEcCC
Q 018671 23 SYDKLVIALG 32 (352)
Q Consensus 23 ~yD~LViAtG 32 (352)
.||.+||..|
T Consensus 23 ~~dVvIIGgG 32 (448)
T 3axb_A 23 RFDYVVVGAG 32 (448)
T ss_dssp EEEEEEECCS
T ss_pred cCCEEEECcC
Confidence 4566666555
No 305
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.74 E-value=0.28 Score=38.08 Aligned_cols=74 Identities=15% Similarity=0.101 Sum_probs=47.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
++++|+|+|..|..+|..|.+.+ .+|++++.. ++. .+.+.+.++.++.+.++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g--------------~~V~~id~~-------~~~----~~~~~~~~~~~~~gd~~~-- 59 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG--------------KKVLAVDKS-------KEK----IELLEDEGFDAVIADPTD-- 59 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESC-------HHH----HHHHHHTTCEEEECCTTC--
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEECC-------HHH----HHHHHHCCCcEEECCCCC--
Confidence 58999999999999999998876 899999863 222 233445677665441110
Q ss_pred CCeEEEcCCcEEecceEEEecCC
Q 018671 164 SQKLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 164 ~~~v~~~~g~~i~~D~vi~a~G~ 186 (352)
++.+.-. + .-.+|.+|+++|.
T Consensus 60 ~~~l~~~-~-~~~~d~vi~~~~~ 80 (141)
T 3llv_A 60 ESFYRSL-D-LEGVSAVLITGSD 80 (141)
T ss_dssp HHHHHHS-C-CTTCSEEEECCSC
T ss_pred HHHHHhC-C-cccCCEEEEecCC
Confidence 0000000 0 1148999999983
No 306
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.45 E-value=0.27 Score=44.07 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=49.4
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC--ceEEE
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDV 162 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~--~V~~v 162 (352)
+|.|||+|..|.-+|..|++.+ .+|+++.+.. .+.+++.|+.+... ... +
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g--------------~~V~~~~r~~-------------~~~i~~~g~~~~~~~g~~~-~ 55 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSG--------------EDVHFLLRRD-------------YEAIAGNGLKVFSINGDFT-L 55 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTS--------------CCEEEECSTT-------------HHHHHHTCEEEEETTCCEE-E
T ss_pred EEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEcCc-------------HHHHHhCCCEEEcCCCeEE-E
Confidence 8999999999999999998865 7899997632 14456778876542 221 1
Q ss_pred ECCeEEEcCCcE-EecceEEEecCCCcc
Q 018671 163 DSQKLILNDGTE-VPYGLLVWSTGVGPS 189 (352)
Q Consensus 163 ~~~~v~~~~g~~-i~~D~vi~a~G~~~~ 189 (352)
.+-.+. .+-+. -++|.||+|+.....
T Consensus 56 ~~~~~~-~~~~~~~~~D~vilavk~~~~ 82 (312)
T 3hn2_A 56 PHVKGY-RAPEEIGPMDLVLVGLKTFAN 82 (312)
T ss_dssp SCCCEE-SCHHHHCCCSEEEECCCGGGG
T ss_pred eeceee-cCHHHcCCCCEEEEecCCCCc
Confidence 111111 12111 258999999876554
No 307
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.13 E-value=0.33 Score=37.76 Aligned_cols=76 Identities=22% Similarity=0.255 Sum_probs=49.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
.+|+|+|.|..|..+|..|.+.+ .+|++++.. ++.. +.+++.|+.+..+..+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g--------------~~v~vid~~-------~~~~----~~~~~~g~~~i~gd~~~-- 60 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD--------------IPLVVIETS-------RTRV----DELRERGVRAVLGNAAN-- 60 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESC-------HHHH----HHHHHTTCEEEESCTTS--
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECC-------HHHH----HHHHHcCCCEEECCCCC--
Confidence 48999999999999999999876 899999873 2222 33455788766541100
Q ss_pred CCeEEEcCCcEEecceEEEecCCCc
Q 018671 164 SQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 164 ~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
..+ +..-..-.+|.+|.+++...
T Consensus 61 -~~~-l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 61 -EEI-MQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp -HHH-HHHTTGGGCSEEEECCSCHH
T ss_pred -HHH-HHhcCcccCCEEEEECCChH
Confidence 000 10000125899999988654
No 308
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=90.12 E-value=0.3 Score=48.15 Aligned_cols=56 Identities=21% Similarity=0.213 Sum_probs=39.0
Q ss_pred CCccccCCccccCCCCCEEEEccccccccCCCCcCCCC-chHHHHHHHHHHHHHHHHHh
Q 018671 202 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA-LAQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 202 ~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~-~~~~A~~qg~~~a~~i~~~~ 259 (352)
.|.|.||.+.|+ ..|++||+|+|+... ..|...+.. ....|.-.|+.+++++...+
T Consensus 359 ~GGi~vd~~~~~-~IpGLyAaGe~a~~g-~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 359 MGGIETDQNCET-RIKGLFAVGECSSVG-LHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECS-SSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCcc-ccCCEEEcccccccc-ccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 478999999998 899999999997411 012222222 22456677999999887765
No 309
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.88 E-value=0.21 Score=44.00 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+++|+|||||.+|...|..|.+.+ .+|+++++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~G--------------a~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTG--------------CKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGT--------------CEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCC--------------CEEEEEcCC
Confidence 369999999999999999998877 899999864
No 310
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=89.61 E-value=0.23 Score=47.79 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=26.7
Q ss_pred EEEeC-ceEEEEC---C--eEEEcCCcEEecceEEEecCC
Q 018671 153 RLVRG-IVKDVDS---Q--KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 153 ~v~~~-~V~~v~~---~--~v~~~~g~~i~~D~vi~a~G~ 186 (352)
+|+++ +|++|+. + .|.+.+|+++.+|.||+|++.
T Consensus 216 ~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 216 WLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp GEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred EEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCH
Confidence 47888 7999863 2 456678888999999999864
No 311
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.47 E-value=0.67 Score=41.59 Aligned_cols=79 Identities=18% Similarity=0.273 Sum_probs=48.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
.+|.|||+|..|.-+|..|++.+ .+|+++ .. ++. .+.+++.|+.+.........
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G--------------~~V~l~-~~-------~~~----~~~i~~~g~~~~~~~~~~~~ 73 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAG--------------HEVILI-AR-------PQH----VQAIEATGLRLETQSFDEQV 73 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--------------CEEEEE-CC-------HHH----HHHHHHHCEEEECSSCEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHCC--------------CeEEEE-Ec-------HhH----HHHHHhCCeEEEcCCCcEEE
Confidence 48999999999999999998866 789988 42 121 23445557665532111111
Q ss_pred CCeEEEcCCcE-EecceEEEecCCCcc
Q 018671 164 SQKLILNDGTE-VPYGLLVWSTGVGPS 189 (352)
Q Consensus 164 ~~~v~~~~g~~-i~~D~vi~a~G~~~~ 189 (352)
.-.+ ..+-+. -++|.||+|+.....
T Consensus 74 ~~~~-~~~~~~~~~~D~vilavk~~~~ 99 (318)
T 3hwr_A 74 KVSA-SSDPSAVQGADLVLFCVKSTDT 99 (318)
T ss_dssp CCEE-ESCGGGGTTCSEEEECCCGGGH
T ss_pred eeee-eCCHHHcCCCCEEEEEcccccH
Confidence 1011 122111 258999999876543
No 312
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=89.22 E-value=0.38 Score=45.24 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=29.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..|+|||+|.+|+-+|..|++.+ .+|+++|+.
T Consensus 7 ~~v~iiG~G~~gl~~a~~l~~~g--------------~~v~~~e~~ 38 (433)
T 1d5t_A 7 YDVIVLGTGLTECILSGIMSVNG--------------KKVLHMDRN 38 (433)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEecC
Confidence 48999999999999999999876 899999986
No 313
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=89.12 E-value=0.92 Score=43.83 Aligned_cols=72 Identities=21% Similarity=0.192 Sum_probs=50.9
Q ss_pred CcEEEECCChHHHH-HHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeC-ceEE
Q 018671 84 LHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKD 161 (352)
Q Consensus 84 ~~vvVvGgG~~g~e-~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~ 161 (352)
++|.+||-|-+|+. +|..|.+.+ .+|+..+..... + ..+.|++.||++..+ ....
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G--------------~~V~~sD~~~~~----~-----~~~~L~~~gi~~~~G~~~~~ 76 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALG--------------HTVTGSDANIYP----P-----MSTQLEQAGVTIEEGYLIAH 76 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESCCCT----T-----HHHHHHHTTCEEEESCCGGG
T ss_pred CEEEEEEecHhhHHHHHHHHHhCC--------------CEEEEECCCCCc----H-----HHHHHHHCCCEEECCCCHHH
Confidence 59999999999998 466677776 899999975321 1 235678889998765 2111
Q ss_pred EECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 162 VDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 162 v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+ . -.+|+||..+|..+.
T Consensus 77 ~-------~----~~~d~vV~Spgi~~~ 93 (524)
T 3hn7_A 77 L-------Q----PAPDLVVVGNAMKRG 93 (524)
T ss_dssp G-------C----SCCSEEEECTTCCTT
T ss_pred c-------C----CCCCEEEECCCcCCC
Confidence 0 0 137889999888775
No 314
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=89.02 E-value=0.3 Score=46.37 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=27.5
Q ss_pred CCEEEeC-ceEEEEC--C--eEEEcCCcEEecceEEEecCC
Q 018671 151 GVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 151 gV~v~~~-~V~~v~~--~--~v~~~~g~~i~~D~vi~a~G~ 186 (352)
|.+++++ +|++|+. + .|.+.+|+++.+|.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 3567777 7888864 2 356678889999999999874
No 315
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.86 E-value=1 Score=40.72 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=48.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
.+|.|||+|..|.-+|..|++.+ .+|+++++. +. .+.+++.|+.+.........
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g--------------~~V~~~~r~-------~~-----~~~~~~~g~~~~~~~~~~~~ 57 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG--------------EAINVLARG-------AT-----LQALQTAGLRLTEDGATHTL 57 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT--------------CCEEEECCH-------HH-----HHHHHHTCEEEEETTEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC--------------CEEEEEECh-------HH-----HHHHHHCCCEEecCCCeEEE
Confidence 48999999999999999998866 789998741 11 23566778876543111111
Q ss_pred CCeEEE-cCCcE-EecceEEEecCCC
Q 018671 164 SQKLIL-NDGTE-VPYGLLVWSTGVG 187 (352)
Q Consensus 164 ~~~v~~-~~g~~-i~~D~vi~a~G~~ 187 (352)
. +.. .+-+. -++|.||+|+...
T Consensus 58 ~--~~~~~~~~~~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 58 P--VRATHDAAALGEQDVVIVAVKAP 81 (335)
T ss_dssp C--CEEESCHHHHCCCSEEEECCCHH
T ss_pred e--eeEECCHHHcCCCCEEEEeCCch
Confidence 1 111 12111 2589999998653
No 316
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.83 E-value=0.39 Score=37.00 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|+|+|+|..|..+|..|.+.+ .+|+++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g--------------~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG--------------HEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 48999999999999999998765 788888863
No 317
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=88.68 E-value=0.28 Score=48.97 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.|+|||||.+|+-+|..+++.+ .+|+|++..
T Consensus 7 DVvVIGgG~AGL~AAl~aae~G--------------~~V~vlEK~ 37 (660)
T 2bs2_A 7 DSLVIGGGLAGLRAAVATQQKG--------------LSTIVLSLI 37 (660)
T ss_dssp SEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSS
T ss_pred cEEEECchHHHHHHHHHHHHCC--------------CcEEEEecc
Confidence 7999999999999999999876 788888874
No 318
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=88.53 E-value=0.36 Score=48.19 Aligned_cols=31 Identities=19% Similarity=0.301 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHHh------HhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDF------IMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~------~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.|+|||+|.+|+.+|.++++. + .+|+|++..
T Consensus 24 DVvVVG~G~AGL~AAl~aa~~~~~~~pG--------------~~V~vleK~ 60 (662)
T 3gyx_A 24 DLLMVGGGMGNCGAAFEAVRWADKYAPE--------------AKILLVDKA 60 (662)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCTT--------------CCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHhhccccCCC--------------CcEEEEEec
Confidence 799999999999999999986 5 789999874
No 319
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=88.47 E-value=0.39 Score=45.85 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
..|+|||+|.+|+-+|..|++.+ .+|+++|+.+
T Consensus 21 ~dv~iiG~G~~g~~~a~~l~~~g--------------~~v~~~e~~~ 53 (475)
T 3p1w_A 21 YDVIILGTGLKECILSGLLSHYG--------------KKILVLDRNP 53 (475)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeccC
Confidence 37999999999999999999877 8999999974
No 320
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=88.21 E-value=0.27 Score=47.37 Aligned_cols=32 Identities=41% Similarity=0.533 Sum_probs=27.2
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|||+|.+|+-+|..|++.. +.+|.|+|++
T Consensus 19 D~IIVGsG~aG~v~A~rLse~~-------------~~~VLvLEaG 50 (526)
T 3t37_A 19 DIVIVGGGSAGSLLAARLSEDP-------------DSRVLLIEAG 50 (526)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-------------TSCEEEECSS
T ss_pred eEEEECccHHHHHHHHHHHhCC-------------CCeEEEEcCC
Confidence 7999999999999999998632 2688999876
No 321
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.19 E-value=0.52 Score=38.36 Aligned_cols=76 Identities=16% Similarity=0.085 Sum_probs=47.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHh-HhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEE
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 161 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~-~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~ 161 (352)
..+|+|+|+|..|..+|..|.+. + .+|++++.. ++.. +.+++.|+++..+...+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--------------~~V~vid~~-------~~~~----~~~~~~g~~~~~gd~~~ 93 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--------------KISLGIEIR-------EEAA----QQHRSEGRNVISGDATD 93 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--------------SCEEEEESC-------HHHH----HHHHHTTCCEEECCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--------------CeEEEEECC-------HHHH----HHHHHCCCCEEEcCCCC
Confidence 35899999999999999999886 6 789999863 2221 23456677655431100
Q ss_pred EECCeEEEcCC-cEEecceEEEecCCC
Q 018671 162 VDSQKLILNDG-TEVPYGLLVWSTGVG 187 (352)
Q Consensus 162 v~~~~v~~~~g-~~i~~D~vi~a~G~~ 187 (352)
.+. +..- ..-.+|.+|.+++..
T Consensus 94 --~~~--l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 94 --PDF--WERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp --HHH--HHTBCSCCCCCEEEECCSSH
T ss_pred --HHH--HHhccCCCCCCEEEEeCCCh
Confidence 000 0000 012489999998753
No 322
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=87.91 E-value=0.9 Score=43.21 Aligned_cols=9 Identities=44% Similarity=0.741 Sum_probs=4.1
Q ss_pred CCEEEEcCC
Q 018671 24 YDKLVIALG 32 (352)
Q Consensus 24 yD~LViAtG 32 (352)
+|.+||..|
T Consensus 40 ~~v~iiGaG 48 (495)
T 2vvm_A 40 WDVIVIGGG 48 (495)
T ss_dssp EEEEEECCB
T ss_pred CCEEEECCc
Confidence 444444444
No 323
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=87.89 E-value=0.44 Score=45.53 Aligned_cols=33 Identities=33% Similarity=0.556 Sum_probs=27.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||||++|+.+|..|++.+ ..+|+++|+.
T Consensus 10 ~~v~iiG~G~~Gl~~A~~l~~~g-------------~~~v~v~E~~ 42 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGAAVRLTELG-------------YKNWHLYECN 42 (484)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-------------CCSEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHHcC-------------CCCEEEEeCC
Confidence 48999999999999999998864 1467777764
No 324
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=87.70 E-value=0.39 Score=46.60 Aligned_cols=48 Identities=19% Similarity=0.306 Sum_probs=33.5
Q ss_pred CCCEEEeC-ceEEEEC--C---eEEEcC---Cc--EE---ecceEEEecCCCcch-hhhhcCC
Q 018671 150 SGVRLVRG-IVKDVDS--Q---KLILND---GT--EV---PYGLLVWSTGVGPST-LVKSLDL 197 (352)
Q Consensus 150 ~gV~v~~~-~V~~v~~--~---~v~~~~---g~--~i---~~D~vi~a~G~~~~~-~~~~~~l 197 (352)
.+++++++ .|+++.. + +|.+.+ |+ ++ .++.||+|+|....+ ++..+|+
T Consensus 209 ~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGi 271 (546)
T 1kdg_A 209 PNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGI 271 (546)
T ss_dssp TTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTB
T ss_pred CCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCC
Confidence 47888888 7888743 2 466654 64 34 889999999987654 6666665
No 325
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=87.63 E-value=1 Score=41.75 Aligned_cols=9 Identities=33% Similarity=0.302 Sum_probs=4.2
Q ss_pred ECCeEEEcC
Q 018671 163 DSQKLILND 171 (352)
Q Consensus 163 ~~~~v~~~~ 171 (352)
..+.|++.-
T Consensus 240 ~ad~VV~a~ 248 (425)
T 3ka7_A 240 DADLVISNL 248 (425)
T ss_dssp ECSEEEECS
T ss_pred ECCEEEECC
Confidence 344555543
No 326
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=87.60 E-value=0.79 Score=43.69 Aligned_cols=51 Identities=10% Similarity=-0.002 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEEC---C---eEEEcCCcEEecceEEEecCCC
Q 018671 137 DRLRHYATTQLSKSGVRLVRG-IVKDVDS---Q---KLILNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 137 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~~---~---~v~~~~g~~i~~D~vi~a~G~~ 187 (352)
.++.+.+.+.+++.|++++++ +|++|.. + +|.+.+|+++.||.||.+++..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 477888889999999999999 7998864 2 4678889899999999999988
No 327
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=87.60 E-value=0.28 Score=47.64 Aligned_cols=30 Identities=33% Similarity=0.640 Sum_probs=26.0
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|||+|.+|+-+|..|++ + .+|.|+|++
T Consensus 28 D~IIVGsG~AG~v~A~rLse-g--------------~~VlvLEaG 57 (536)
T 1ju2_A 28 DYVIVGGGTSGCPLAATLSE-K--------------YKVLVLERG 57 (536)
T ss_dssp EEEEECCSTTHHHHHHHHTT-T--------------SCEEEECSS
T ss_pred cEEEECccHHHHHHHHHHhc-C--------------CcEEEEecC
Confidence 69999999999999999998 5 677777765
No 328
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=87.30 E-value=0.38 Score=47.83 Aligned_cols=31 Identities=29% Similarity=0.420 Sum_probs=26.5
Q ss_pred cEEEECCChHHHHHHHHHH---H-hHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELS---D-FIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~---~-~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.|+|||||.+|+.+|..++ + .+ .+|+|+++.
T Consensus 24 DVvVIG~G~AGl~AAl~aa~~~~~~G--------------~~V~vlEK~ 58 (643)
T 1jnr_A 24 DILIIGGGFSGCGAAYEAAYWAKLGG--------------LKVTLVEKA 58 (643)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHTTTT--------------CCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHhhhhhhCC--------------CeEEEEeCc
Confidence 7999999999999999998 4 44 678888764
No 329
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.25 E-value=0.66 Score=40.15 Aligned_cols=35 Identities=23% Similarity=0.213 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
.++|+|||+|..|.++|..|+..+- .+|++++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv-------------~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV-------------GNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-------------SEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC-------------CeEEEEcCCC
Confidence 3599999999999999999998871 4899998864
No 330
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=86.96 E-value=0.33 Score=45.81 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=28.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
++|+|||.|.+|+..|..|.+.+ .+|+..+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G--------------~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARG--------------VTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTT--------------CCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCC--------------CEEEEEECCC
Confidence 58999999999999998888776 7888888753
No 331
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=86.23 E-value=0.3 Score=43.44 Aligned_cols=46 Identities=20% Similarity=0.424 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHh
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 149 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~ 149 (352)
.++|+|||||..|+ +.++.+.. +..+|+++| .++.+.+..++.|..
T Consensus 84 pk~VLIiGgGdG~~--~revlk~~------------~v~~v~~VE-------ID~~Vv~~a~~~lp~ 129 (294)
T 3o4f_A 84 AKHVLIIGGGDGAM--LREVTRHK------------NVESITMVE-------IDAGVVSFCRQYLPN 129 (294)
T ss_dssp CCEEEEESCTTSHH--HHHHHTCT------------TCCEEEEEE-------SCHHHHHHHHHHCHH
T ss_pred CCeEEEECCCchHH--HHHHHHcC------------CcceEEEEc-------CCHHHHHHHHhcCcc
Confidence 46999999998775 44444332 226899998 467777777776643
No 332
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.20 E-value=0.89 Score=40.64 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc--EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~--~V~lv~~~ 129 (352)
.+|+|||+|..|.-+|..|+..+ . +|++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g--------------~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRG--------------IAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCCEEEEEeCC
Confidence 58999999999999999998755 4 89999864
No 333
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=85.12 E-value=0.94 Score=45.13 Aligned_cols=56 Identities=16% Similarity=0.118 Sum_probs=37.4
Q ss_pred CCccccCCccccCCCCCEEEEccccccccCCCCcCCCCc-hHHHHHHHHHHHHHHHHHh
Q 018671 202 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL-AQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 202 ~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~-~~~A~~qg~~~a~~i~~~~ 259 (352)
.|.|.||.+.|+ ..|++||+|+|+... ..|...+... ...|+-.|+.+++++....
T Consensus 372 ~GGi~vd~~~~v-~IpGLYAaGE~a~~g-~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 372 MGGIRTDYRGEA-KLKGLFSAGEAACWD-MHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECC-SSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEECCCCce-ecCCEEecccccccc-ccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 367899999998 899999999986311 1122222222 2346677888888877655
No 334
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.95 E-value=0.47 Score=42.77 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|.|||+|..|..+|..++..+ .+|++++..
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G--------------~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG--------------FRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 48999999999999999999877 899999875
No 335
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=84.36 E-value=0.98 Score=43.81 Aligned_cols=56 Identities=18% Similarity=0.134 Sum_probs=37.2
Q ss_pred CCccccCCccccCCCCCEEEEccccccccCCCCcCCCC-chHHHHHHHHHHHHHHHHHh
Q 018671 202 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA-LAQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 202 ~G~i~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~-~~~~A~~qg~~~a~~i~~~~ 259 (352)
.|.|.||...|+ ..|++||+|+|+... ..|...+.. +...|.-.|+.+++++....
T Consensus 354 ~GGi~vd~~~~t-~I~GLyAaGE~a~~g-~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 354 CGGVMVDDHGRT-DVEGLYAIGEVSYTG-LHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp SCEEECCTTCBC-SSBTEEECGGGEECS-SSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEECCCCCC-ccCCEEecccccccc-ccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 377899998887 899999999998321 112222222 22346677888888876543
No 336
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=84.34 E-value=1 Score=33.19 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=27.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|+|+|+|..|..++..|...+ ..+|+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g-------------~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSS-------------NYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCS-------------SEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-------------CceEEEEeCC
Confidence 48999999999999999998754 1678888863
No 337
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=84.34 E-value=1.4 Score=40.00 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
|+|+|+|||..|.+++....+++ .+|+++++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G--------------~~vv~vd~~ 33 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAG--------------MKVVLVDKN 33 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 69999999999999999998887 888888865
No 338
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=83.99 E-value=1.4 Score=39.16 Aligned_cols=98 Identities=16% Similarity=0.252 Sum_probs=54.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEE
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 161 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~ 161 (352)
.+.+|+.||+|+.++... .+++.. +.+|+-++. +++..+.+++.+++.|+ .+|+=
T Consensus 122 ~g~rVLDIGcG~G~~ta~-~lA~~~-------------ga~V~gIDi-------s~~~l~~Ar~~~~~~gl----~~v~~ 176 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGI-LLSHVY-------------GMRVNVVEI-------EPDIAELSRKVIEGLGV----DGVNV 176 (298)
T ss_dssp TTCEEEEECCCSSCHHHH-HHHHTT-------------CCEEEEEES-------SHHHHHHHHHHHHHHTC----CSEEE
T ss_pred CcCEEEEECCCccHHHHH-HHHHcc-------------CCEEEEEEC-------CHHHHHHHHHHHHhcCC----CCeEE
Confidence 446999999997543322 123321 278999984 56777777887777664 12222
Q ss_pred EECCeEEEcCCcEEecceEEEecCCCcc--hhhhhcCCCCCCCCccccC
Q 018671 162 VDSQKLILNDGTEVPYGLLVWSTGVGPS--TLVKSLDLPKSPGGRIGID 208 (352)
Q Consensus 162 v~~~~v~~~~g~~i~~D~vi~a~G~~~~--~~~~~~~l~~~~~G~i~Vd 208 (352)
+..+...+.+ -++|.|+.+.. .+. .+++.+--.+.+.|++.+.
T Consensus 177 v~gDa~~l~d---~~FDvV~~~a~-~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 177 ITGDETVIDG---LEFDVLMVAAL-AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp EESCGGGGGG---CCCSEEEECTT-CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred EECchhhCCC---CCcCEEEECCC-ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 2232212222 24899988765 333 2444432223455665554
No 339
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=83.85 E-value=0.89 Score=45.65 Aligned_cols=41 Identities=27% Similarity=0.391 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
++|+|||||.+|+.+|..|.+.+.. +. .....+|+|+|+.+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~-----~~-~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAAT-----LP-AGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTT-----SC-TTCEEEEEEECCCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcc-----cc-cCCCceEEEEeccC
Confidence 5899999999999999999876511 00 00126899999864
No 340
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=83.77 E-value=0.8 Score=43.61 Aligned_cols=6 Identities=17% Similarity=0.196 Sum_probs=2.8
Q ss_pred CeEeec
Q 018671 306 GLSLAG 311 (352)
Q Consensus 306 ~~~~~G 311 (352)
++.+.|
T Consensus 444 ~l~~~G 449 (513)
T 4gde_A 444 DIWSRG 449 (513)
T ss_dssp TEEECS
T ss_pred CcEEec
Confidence 344444
No 341
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.75 E-value=0.89 Score=38.16 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=47.9
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEEC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDS 164 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~~ 164 (352)
+|+|+|+|..|..+|..|.+.+ .+|++++.. ++..+ +..++.|+.++.+..++ .
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g--------------~~v~vid~~-------~~~~~---~l~~~~~~~~i~gd~~~--~ 55 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRK--------------YGVVIINKD-------RELCE---EFAKKLKATIIHGDGSH--K 55 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTT--------------CCEEEEESC-------HHHHH---HHHHHSSSEEEESCTTS--H
T ss_pred EEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC-------HHHHH---HHHHHcCCeEEEcCCCC--H
Confidence 7999999999999999998866 899999863 22222 21233577766541110 0
Q ss_pred CeEEEcCCcEEecceEEEecCCCcc
Q 018671 165 QKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 165 ~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+. +..-..-.+|.+|.+++....
T Consensus 56 ~~--l~~a~i~~ad~vi~~~~~d~~ 78 (218)
T 3l4b_C 56 EI--LRDAEVSKNDVVVILTPRDEV 78 (218)
T ss_dssp HH--HHHHTCCTTCEEEECCSCHHH
T ss_pred HH--HHhcCcccCCEEEEecCCcHH
Confidence 00 000001258999999987543
No 342
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.44 E-value=1.1 Score=40.58 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=31.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
+..+|+|||+|-.|+++|..|+..+- .++++++...
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGV-------------g~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGV-------------RKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTC-------------CEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCC-------------CEEEEecCCE
Confidence 45699999999999999999999872 6899998753
No 343
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=83.13 E-value=0.66 Score=45.45 Aligned_cols=32 Identities=34% Similarity=0.630 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|||||.+|+-+|..|++.. ..+|.|+|++
T Consensus 8 DyIVVGgG~AG~v~A~rLse~~-------------~~~VLllEaG 39 (577)
T 3q9t_A 8 DFVIVGGGTAGNTVAGRLAENP-------------NVTVLIVEAG 39 (577)
T ss_dssp EEEEESCSHHHHHHHHHHTTST-------------TSCEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhCC-------------CCcEEEEecC
Confidence 6899999999999999998753 2689999987
No 344
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=82.92 E-value=1.3 Score=39.31 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=30.5
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
+..+|+|||+|-.|.++|..|+..+- .+++|++...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV-------------G~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI-------------GKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC-------------SEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC-------------CEEEEECCCc
Confidence 44699999999999999999998872 5889998753
No 345
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=82.88 E-value=1.2 Score=44.42 Aligned_cols=44 Identities=11% Similarity=0.039 Sum_probs=32.6
Q ss_pred CccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 209 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 209 ~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
...++ +.|++||+|||+... .-..+..+..+|.+++.++...+.
T Consensus 446 ~~~~t-~v~gl~a~Ge~~~~~-------~hg~~~~sl~~g~~ag~~a~~~~~ 489 (662)
T 3gyx_A 446 YNRMT-TVEGLWTCADGVGAS-------GHKFSSGSHAEGRIVGKQMVRWYL 489 (662)
T ss_dssp CTTBC-SSBTEECCSSSBCSC-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-ccCCeEeCccccccc-------cCccHhHHHHHHHHHHHHHHHHHh
Confidence 45666 899999999998521 112266788889999998887765
No 346
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=82.67 E-value=2 Score=40.41 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=43.4
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC-C--------CCCCCcHHHHHHHHHHHHhCCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E--------ILSSFDDRLRHYATTQLSKSGV 152 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~--------~l~~~~~~~~~~~~~~l~~~gV 152 (352)
+..+|.|||.|+.|+-+|..+++.+ .+|+-++-. . ..|-..+.+.+.+.+.++...+
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G--------------~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l 85 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLG--------------HRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRL 85 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC--------------CcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCe
Confidence 3458999999999999999999887 899998764 1 1344556666666666665555
Q ss_pred EE
Q 018671 153 RL 154 (352)
Q Consensus 153 ~v 154 (352)
.+
T Consensus 86 ~~ 87 (444)
T 3vtf_A 86 SF 87 (444)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 347
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.36 E-value=1.4 Score=38.79 Aligned_cols=32 Identities=22% Similarity=0.216 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|.|||+|..|..+|..++..+ .+|+++++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G--------------~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG--------------FAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCC
Confidence 48999999999999999999876 899999864
No 348
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=82.28 E-value=1.1 Score=43.06 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=26.5
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|||+|.+|+-+|..|++.+ .+|.++|++
T Consensus 7 d~~iiG~G~~g~~~a~~l~~~~--------------~~v~~~e~~ 37 (504)
T 1n4w_A 7 PAVVIGTGYGAAVSALRLGEAG--------------VQTLMLEMG 37 (504)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CcEEEEeCC
Confidence 7999999999999999999865 677777764
No 349
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=81.85 E-value=0.78 Score=44.98 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
.++|||||.+|+-+|..|++.. ..+|.|+|++.
T Consensus 21 DyIIVGgG~AG~vlA~RLse~~-------------~~~VLlLEaG~ 53 (583)
T 3qvp_A 21 DYIIAGGGLTGLTTAARLTENP-------------NISVLVIESGS 53 (583)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-------------TCCEEEECSSC
T ss_pred cEEEECCcHHHHHHHHHHHhCC-------------CCcEEEEecCC
Confidence 7999999999999999998632 37999999864
No 350
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=81.77 E-value=1.1 Score=43.08 Aligned_cols=22 Identities=23% Similarity=0.249 Sum_probs=20.2
Q ss_pred cEEEECCChHHHHHHHHHHHhH
Q 018671 85 HCVVVGGGPTGVEFSGELSDFI 106 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~ 106 (352)
.++|||+|.+|+-+|..|++.+
T Consensus 13 d~~iiG~G~~g~~~a~~l~~~~ 34 (507)
T 1coy_A 13 PALVIGSGYGGAVAALRLTQAG 34 (507)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHHCC
Confidence 7999999999999999999854
No 351
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.74 E-value=1.7 Score=38.51 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=28.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|.|||+|..|..+|..++..+ .+|+++++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G--------------~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG--------------HTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 58999999999999999998876 799999874
No 352
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=80.69 E-value=0.66 Score=45.32 Aligned_cols=32 Identities=31% Similarity=0.462 Sum_probs=27.1
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|||||.+|+-+|..|++- +..+|.|+|++
T Consensus 4 D~IIVG~G~aG~v~A~rLse~-------------~~~~VlllEaG 35 (566)
T 3fim_B 4 DYVVVGAGNAGNVVAARLTED-------------PDVSVLVLEAG 35 (566)
T ss_dssp EEEESCCSTTHHHHHHHHTTS-------------TTCCEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHhC-------------cCCcEEEEecC
Confidence 689999999999999999862 12789999876
No 353
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=80.47 E-value=1.7 Score=37.50 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=29.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+..+|+|||+|-.|.++|..|+..+- .++++++..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gv-------------g~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGV-------------GTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTC-------------SEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCC-------------CeEEEEeCC
Confidence 34699999999999999999998872 589999875
No 354
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=80.30 E-value=2.1 Score=42.38 Aligned_cols=43 Identities=19% Similarity=0.051 Sum_probs=35.2
Q ss_pred CCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 208 DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 208 d~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+++|+++..+++|++|+++... .-..|..||..|+.|+...+.
T Consensus 370 ~~tle~k~~~gLf~AGqi~g~~----------Gy~eA~a~G~~AG~naa~~~~ 412 (641)
T 3cp8_A 370 RSTMETRPVENLFFAGQINGTS----------GYEEAAAQGLMAGINAVRKIL 412 (641)
T ss_dssp CTTSBBSSSBTEEECSGGGTBC----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCcCCEEEEEeecCCc----------cHHHHHHHHHHHHHHHHHHhc
Confidence 3588988899999999999631 234889999999999988776
No 355
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=80.12 E-value=1.9 Score=39.18 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=41.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCC------------CCCcHHHHHHHHHHHHh
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------------SSFDDRLRHYATTQLSK 149 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l------------~~~~~~~~~~~~~~l~~ 149 (352)
+..+|+|||.|..|+++|..|+..+- .+++|++...+- ...+..-.+.+.+.|++
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gv-------------g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ 101 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGV-------------KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQN 101 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTC-------------SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHH
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCC-------------CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHh
Confidence 44699999999999999999998872 589999875321 12233345566677776
Q ss_pred C--CCEE
Q 018671 150 S--GVRL 154 (352)
Q Consensus 150 ~--gV~v 154 (352)
. ++++
T Consensus 102 lnp~v~v 108 (346)
T 1y8q_A 102 LNPMVDV 108 (346)
T ss_dssp TCTTSEE
T ss_pred HCCCeEE
Confidence 5 3544
No 356
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=80.06 E-value=1.3 Score=43.52 Aligned_cols=20 Identities=30% Similarity=0.760 Sum_probs=19.1
Q ss_pred cEEEECCChHHHHHHHHHHH
Q 018671 85 HCVVVGGGPTGVEFSGELSD 104 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~ 104 (352)
.++|||+|.+|+-+|..|++
T Consensus 26 d~iivG~G~~g~~~a~~l~~ 45 (587)
T 1gpe_A 26 DYIIAGGGLTGLTVAAKLTE 45 (587)
T ss_dssp EEEEECCSHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHh
Confidence 79999999999999999987
No 357
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=80.04 E-value=2.1 Score=42.31 Aligned_cols=44 Identities=16% Similarity=0.059 Sum_probs=35.9
Q ss_pred cCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 207 IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 207 Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
.+++|+++..+++|++|.++.. .--..|..||.+|+.|.+..+.
T Consensus 380 l~~tLe~k~~~gLf~AGqinGt----------~GyeEAaaqGl~AG~nAa~~~~ 423 (637)
T 2zxi_A 380 LYPTLETKKIRGLFHAGNFNGT----------TGYEEAAGQGIVAGINAALRAF 423 (637)
T ss_dssp BCTTSBBSSSBTEEECGGGGTB----------CSHHHHHHHHHHHHHHHHHHHT
T ss_pred cCccccccCCCCEEEeeecCCc----------chHHHHHHHHHHHHHHHHHHhc
Confidence 4578999889999999999963 2345788999999999887765
No 358
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=80.00 E-value=2.7 Score=41.49 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
.+|+|||+|..|+++|..|+..+- .+++|++...
T Consensus 18 s~VlVVGaGGLGsevak~La~aGV-------------G~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGF-------------SHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-------------CEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC-------------CeEEEecCCE
Confidence 499999999999999999998872 5999998764
No 359
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=79.88 E-value=4.2 Score=38.11 Aligned_cols=32 Identities=25% Similarity=0.203 Sum_probs=29.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+..|||.|..|.-+|..|++.+ .+|+.++..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G--------------~~V~~~D~~ 43 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHG--------------VDVLGVDIN 43 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CccEEEeeCHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 48999999999999999999987 899999875
No 360
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=79.65 E-value=2.1 Score=39.01 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=31.0
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
+..+|+|||+|..|.++|..|+..+- .++++++...
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGv-------------g~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGI-------------GEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTC-------------SEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCC-------------CeEEEECCCc
Confidence 45799999999999999999998872 6899998753
No 361
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=79.48 E-value=0.88 Score=35.40 Aligned_cols=33 Identities=24% Similarity=0.151 Sum_probs=26.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|+|||+|..|..+|..|...+ .+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g--------------~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ--------------YKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT--------------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEcCC
Confidence 469999999999999988887644 668888763
No 362
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=79.34 E-value=2.3 Score=39.91 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=29.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||+|..|+++|..|+..+- .+++|++..
T Consensus 41 ~~VlvvG~GGlGs~va~~La~aGv-------------g~i~ivD~D 73 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALSGF-------------RQIHVIDMD 73 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHTTC-------------CCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCC-------------CEEEEEcCC
Confidence 499999999999999999998872 589999875
No 363
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=78.32 E-value=2 Score=42.08 Aligned_cols=47 Identities=15% Similarity=0.296 Sum_probs=35.7
Q ss_pred ccCCCCCHHHhccCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 70 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 70 ~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
.-.|+...+ +-+..+|+|||+|-.|+++|..|+..+- .+++|++...
T Consensus 314 Rllp~~g~e-kL~~arVLIVGaGGLGs~vA~~La~aGV-------------G~ItLvD~D~ 360 (615)
T 4gsl_A 314 RILPDLNLD-IIKNTKVLLLGAGTLGCYVSRALIAWGV-------------RKITFVDNGT 360 (615)
T ss_dssp HTCTTCCHH-HHHTCEEEEECCSHHHHHHHHHHHHTTC-------------CEEEEECCCB
T ss_pred hhcchhhHH-HHhCCeEEEECCCHHHHHHHHHHHHcCC-------------CEEEEEcCCC
Confidence 333444443 3345699999999999999999999872 6899998864
No 364
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=77.96 E-value=2.5 Score=35.17 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=28.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|.|||+|..|..+|..|++.+ .+|+++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g--------------~~V~~~~~~ 51 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAG--------------HEVTYYGSK 51 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEcCC
Confidence 48999999999999999998866 788888764
No 365
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=77.95 E-value=2.7 Score=39.58 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEE----CCe---EEEcCCcEEecceEEEecCCCcch
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVD----SQK---LILNDGTEVPYGLLVWSTGVGPST 190 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~----~~~---v~~~~g~~i~~D~vi~a~G~~~~~ 190 (352)
.+.+.+.+.+++.|++++++ +|++|. ++. |.+ +|+++.+|.||+++|..+..
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~~ 302 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPEK 302 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccchh
Confidence 67777888889999999998 788774 333 333 68889999999999987653
No 366
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=77.93 E-value=1.2 Score=43.12 Aligned_cols=31 Identities=39% Similarity=0.682 Sum_probs=25.7
Q ss_pred cEEEECCChHHHHHHHHHHHh-HhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~-~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|||+|.+|+-+|..|++. + .+|.++|++
T Consensus 15 d~~ivG~G~~G~~~a~~l~~~~~--------------~~v~~~e~g 46 (546)
T 2jbv_A 15 DYIVVGGGSAGAAVAARLSEDPA--------------VSVALVEAG 46 (546)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTT--------------SCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC--------------CCEEEEecC
Confidence 799999999999999999875 3 567777664
No 367
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=77.79 E-value=9 Score=34.34 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=30.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++|.|||-|.+|-.+|..+..++ .+|+.+++.
T Consensus 139 ~g~tvGIIGlG~IG~~vA~~l~~~G--------------~~V~~~dr~ 172 (324)
T 3hg7_A 139 KGRTLLILGTGSIGQHIAHTGKHFG--------------MKVLGVSRS 172 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred ccceEEEEEECHHHHHHHHHHHhCC--------------CEEEEEcCC
Confidence 4579999999999999999998877 899988875
No 368
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=77.72 E-value=2.9 Score=41.39 Aligned_cols=45 Identities=20% Similarity=0.159 Sum_probs=36.2
Q ss_pred ccCCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 206 GIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 206 ~Vd~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
..+.+|+++..+++|++|.++.. .--..|..||.+|+.|.+..+.
T Consensus 374 ~L~~tle~k~~~gLf~AGqinGt----------tGYeEAaaqGl~AG~nAa~~~~ 418 (651)
T 3ces_A 374 DLKPTLESKFIQGLFFAGQINGT----------TGYEEAAAQGLLAGLNAARLSA 418 (651)
T ss_dssp GBCTTSBBSSSBTEEECSGGGTC----------CCHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCccccccCCCCeEEEEEecCC----------cChHHHHHHHHHHHHHHHHHhc
Confidence 34578999889999999999852 2345899999999999887765
No 369
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=77.17 E-value=2.7 Score=38.67 Aligned_cols=33 Identities=15% Similarity=0.154 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..+|+|+|+|.+|..+|..+..++ .+|+++++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lG--------------a~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLG--------------AKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHT--------------CEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 469999999999999999998887 889999864
No 370
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=76.78 E-value=2 Score=41.88 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=30.7
Q ss_pred ccCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 81 ~~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
-+..+|+|||+|-.|+++|..|+..+- .+++|++..
T Consensus 325 L~~~kVLIVGaGGLGs~va~~La~aGV-------------G~ItLvD~D 360 (598)
T 3vh1_A 325 IKNTKVLLLGAGTLGCYVSRALIAWGV-------------RKITFVDNG 360 (598)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHTTTC-------------CEEEEECCS
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCC-------------CEEEEECCC
Confidence 345699999999999999999998872 589999775
No 371
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=76.52 E-value=2.3 Score=44.40 Aligned_cols=39 Identities=13% Similarity=0.176 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
.+|+|||+|..|+|+|..|+..+-. ..++.+++|++...
T Consensus 426 ~~VlvVGaGGlGsevlk~La~~Gv~--------~g~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 426 SKVFLVGSGAIGCEMLKNWALLGLG--------SGSDGYIVVTDNDS 464 (1015)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTTT--------CSTTCEEEEECCCB
T ss_pred CeEEEEecCHHHHHHHHHHHHcCcC--------cCCCCeEEEEeCCE
Confidence 5999999999999999999988710 01124999998763
No 372
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.38 E-value=2.5 Score=40.06 Aligned_cols=32 Identities=16% Similarity=0.420 Sum_probs=28.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|+|+|..|..+|..|...+ .+|++++..
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~--------------~~v~vId~d 35 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGEN--------------NDITIVDKD 35 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTT--------------EEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--------------CCEEEEECC
Confidence 38999999999999999997755 899999863
No 373
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=76.28 E-value=3.7 Score=37.68 Aligned_cols=33 Identities=12% Similarity=0.250 Sum_probs=29.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+++|+|+|+|.+|..++..+.+++ .+|.++++.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G--------------~~vi~~d~~ 46 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMG--------------YKIAVLDPT 46 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEeCC
Confidence 369999999999999999999887 888888764
No 374
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=76.25 E-value=2.8 Score=37.13 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=28.7
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..++|.|||.|..|..+|..++ .+ .+|+++++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG--------------~~V~v~d~~ 43 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SK--------------HEVVLQDVS 43 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT--------------SEEEEECSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cC--------------CEEEEEECC
Confidence 3469999999999999999999 77 899999863
No 375
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=76.15 E-value=1.9 Score=41.92 Aligned_cols=56 Identities=18% Similarity=0.201 Sum_probs=37.0
Q ss_pred CCccccCCcccc-----CCCCCEEEEccccccccCCCCcCCCCc-hHHHHHHHHHHHHHHHHHh
Q 018671 202 GGRIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPAL-AQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 202 ~G~i~Vd~~l~~-----~~~~~IfaiGD~a~~~~~~~~~~~~~~-~~~A~~qg~~~a~~i~~~~ 259 (352)
.|.|.||+..|+ +..|++||+|+|+.-.. |...++.. ...|+-.|++++++++..+
T Consensus 502 ~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~--g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 502 MGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVH--GYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp CCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSS--TTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEECCCCeEECCCCCEeCCEEecccccCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 366888887774 36799999999985221 32222222 2356777899999887654
No 376
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=76.07 E-value=3.7 Score=37.52 Aligned_cols=103 Identities=14% Similarity=0.115 Sum_probs=66.5
Q ss_pred CCEEEEcCCCC---------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC--
Q 018671 24 YDKLVIALGAE---------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG-- 92 (352)
Q Consensus 24 yD~LViAtGs~---------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG-- 92 (352)
+|.+|+=+-.. ...|-|.+...+.++...+.|...+++++. . -++++|++||-+
T Consensus 127 ~D~IviR~~~~~~~~~lA~~s~vPVINa~~~~~HPtQaLaDl~Ti~E~~G------~---------l~glkva~vGD~~n 191 (365)
T 4amu_A 127 YDGIEFRGFAQSDVDALVKYSGVPVWNGLTDDEHPTQIIADFMTMKEKFG------N---------LKNKKIVFIGDYKN 191 (365)
T ss_dssp CSEEEEECSCHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHHHHS------S---------CTTCEEEEESSTTS
T ss_pred CcEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhC------C---------CCCCEEEEECCCCc
Confidence 78888765432 112223333345566666777777777641 1 234799999987
Q ss_pred hHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEE
Q 018671 93 PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLV 155 (352)
Q Consensus 93 ~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~ 155 (352)
.++-.++..++.++ .+|+++.+..+.|..++++.+.+.+..++.|..+.
T Consensus 192 nva~Sl~~~~~~lG--------------~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~ 240 (365)
T 4amu_A 192 NVGVSTMIGAAFNG--------------MHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLR 240 (365)
T ss_dssp HHHHHHHHHHHHTT--------------CEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEE
T ss_pred chHHHHHHHHHHcC--------------CEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEE
Confidence 34445555555555 89999988766665567888888887888886653
No 377
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=76.07 E-value=3 Score=37.55 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.+|+|||+|..|..+|..|+..+ . +|+|++..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g--------------~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRE--------------LADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECC
Confidence 48999999999999999998754 4 79999875
No 378
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=75.81 E-value=2.9 Score=36.39 Aligned_cols=31 Identities=19% Similarity=0.055 Sum_probs=27.5
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+|.|||+|..|.-+|..|++.+ .+|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQG--------------HEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred eEEEECcCHHHHHHHHHHHhCC--------------CCEEEEEcC
Confidence 6999999999999999998866 789998775
No 379
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=75.60 E-value=1.7 Score=40.66 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEE--CCeE--EEcCCcEEecceEEEecCCCcc
Q 018671 137 DRLRHYATTQLSKSGVRLVRG-IVKDVD--SQKL--ILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 137 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~--~~~v--~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
..+.+.+.+.+++.|++++++ +|++|. ++.+ +..+|+++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 367777888888899999998 788875 3443 2357889999999999998765
No 380
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=75.57 E-value=3.3 Score=36.45 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=29.5
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++|.|||.|.+|..+|..+..++ .+|+++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G--------------~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALG--------------AKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--------------CEEEEEECC
Confidence 3479999999999999999998876 789998863
No 381
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=75.52 E-value=2.6 Score=37.86 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|.|||+|..|..+|..++..+ .+|+++++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G--------------~~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG--------------FRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 48999999999999999999876 899999874
No 382
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=75.50 E-value=3.1 Score=38.65 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=29.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..+|+|+|+|.+|..+|..+..++ .+|++++..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG--------------a~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG--------------AVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--------------CEEEEEcCC
Confidence 469999999999999999999887 899998864
No 383
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=75.28 E-value=3.3 Score=37.85 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=29.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|+|+|+|.+|..+|..+..++ .+|+++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G--------------a~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG--------------AQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEECC
Confidence 479999999999999999998877 799999863
No 384
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=75.28 E-value=3.4 Score=36.56 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=29.5
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++|.|||.|.+|..+|..+..++ .+|+++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G--------------~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALG--------------ANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 3469999999999999999998876 799999863
No 385
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=75.19 E-value=4.6 Score=38.21 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=29.6
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..++|.|||+|..|.-+|..++..+ .+|++++..
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G--------------~~V~l~D~~ 69 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVG--------------ISVVAVESD 69 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT--------------CEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 3468999999999999999998876 899999864
No 386
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=75.10 E-value=3 Score=37.01 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=26.8
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+|+|||+|..|..+|..|+..+. ..+|++++..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~------------~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGS------------CSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------------CSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC------------CCEEEEEeCC
Confidence 79999999999999999877540 0289999864
No 387
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=75.05 E-value=3.6 Score=34.55 Aligned_cols=74 Identities=20% Similarity=0.291 Sum_probs=49.7
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCC-EEEeCceE
Q 018671 83 LLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGV-RLVRGIVK 160 (352)
Q Consensus 83 ~~~vvVvGg-G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV-~v~~~~V~ 160 (352)
.++|+|.|| |.+|..++..|.+.+ .+|+++.+.. ... +.+...++ +++...+.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G--------------~~V~~~~R~~------~~~-----~~~~~~~~~~~~~~Dl~ 75 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG--------------HEPVAMVRNE------EQG-----PELRERGASDIVVANLE 75 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESSG------GGH-----HHHHHTTCSEEEECCTT
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC--------------CeEEEEECCh------HHH-----HHHHhCCCceEEEcccH
Confidence 468999997 999999999998876 8999998752 111 22444578 77665333
Q ss_pred EEECCeEEEcCCcEEecceEEEecCCCc
Q 018671 161 DVDSQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 161 ~v~~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
+.+.-.-+ .+|.||.+.|...
T Consensus 76 ----~~~~~~~~---~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 76 ----EDFSHAFA---SIDAVVFAAGSGP 96 (236)
T ss_dssp ----SCCGGGGT---TCSEEEECCCCCT
T ss_pred ----HHHHHHHc---CCCEEEECCCCCC
Confidence 11110001 4899999999765
No 388
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=74.97 E-value=3.4 Score=35.97 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=28.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++++|+|+|.+|..+|..|++.+ .+|+++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G--------------~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLD--------------CAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcC--------------CEEEEEECC
Confidence 368999999999999999998876 789998763
No 389
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=74.81 E-value=3.1 Score=36.57 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=27.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+|.|||+|..|.-+|..|++.+ .+|+++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGG--------------NDVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC--------------CcEEEEEC
Confidence 38999999999999999998766 78999976
No 390
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=74.79 E-value=4.8 Score=37.71 Aligned_cols=50 Identities=18% Similarity=0.193 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEECC--e-EEE-cCCcEEecceEEEecCCC
Q 018671 138 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K-LIL-NDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 138 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~-v~~-~~g~~i~~D~vi~a~G~~ 187 (352)
.+.+.+.+.+.+.|++|+++ +|++|+.+ + +.+ .++.++.+|.||+|++..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCHH
Confidence 57778888899999999999 89988642 3 332 356689999999999753
No 391
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=74.76 E-value=3.3 Score=39.38 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHh-HhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~-~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
..+|.|||.|..|.-+|..|++. + . +|++++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G--------------~~~V~~~D~~ 52 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPC--------------FEKVLGFQRN 52 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTT--------------CCEEEEECCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCC--------------CCeEEEEECC
Confidence 35899999999999999999987 6 7 99999875
No 392
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=74.69 E-value=3.3 Score=38.45 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=28.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|+|+|+|.+|..+|..+..++ .+|++++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G--------------a~V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG--------------AIVRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEcCC
Confidence 469999999999999999988877 789988864
No 393
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=74.51 E-value=3.3 Score=36.82 Aligned_cols=35 Identities=23% Similarity=0.213 Sum_probs=30.2
Q ss_pred ccCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 81 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 81 ~~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+..+|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G--------------~~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNG--------------FKVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCC--------------CeEEEEeCC
Confidence 34568999999999999999999876 789999874
No 394
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=74.37 E-value=3.3 Score=36.92 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=27.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.+|+|||+|..|..+|..|+..+ . +|++++..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g--------------~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDN--------------LADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CceEEEEeCC
Confidence 48999999999999999998765 4 89999875
No 395
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=74.26 E-value=4.9 Score=40.42 Aligned_cols=34 Identities=26% Similarity=0.354 Sum_probs=29.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..++|.|||+|..|.-+|..++..+ .+|++++..
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG--------------~~V~l~D~~ 344 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSN--------------YPVILKEVN 344 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSS
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCC--------------CEEEEEECC
Confidence 4568999999999999999999876 899999875
No 396
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=74.26 E-value=3.1 Score=38.79 Aligned_cols=32 Identities=13% Similarity=0.215 Sum_probs=28.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|+|.|..|..+|..|.+.+ .+|++++..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g--------------~~vvvId~d 36 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG--------------VKMVVLDHD 36 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--------------CCEEEEECC
Confidence 38999999999999999998876 889999864
No 397
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=74.13 E-value=4 Score=37.66 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
.+|||+|+|.+|+.+|..+..++. .+|+++++..
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~Ga-------------~~I~v~D~~G 222 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAAGA-------------TKVTVVDKFG 222 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-------------CEEEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHHcCC-------------CeEEEEECCC
Confidence 499999999999999999988761 4999999864
No 398
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=73.96 E-value=3.8 Score=37.66 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=29.4
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++|+|+|+|.+|..+|..+..++ .+|+++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G--------------a~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG--------------ATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 4579999999999999999998877 789998863
No 399
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=73.91 E-value=3.3 Score=37.29 Aligned_cols=31 Identities=23% Similarity=0.130 Sum_probs=27.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+|.|||+|..|..+|..|++.+ .+|+++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g--------------~~V~~~~r 35 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG--------------QSVLAWDI 35 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeC
Confidence 38999999999999999998765 78999875
No 400
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=73.82 E-value=2.2 Score=37.56 Aligned_cols=31 Identities=29% Similarity=0.485 Sum_probs=27.3
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+|+|||+|..|.-+|..|++.+ .+|+++.+.
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g--------------~~V~~~~r~ 34 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSL--------------PHTTLIGRH 34 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHC--------------TTCEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCC--------------CeEEEEEec
Confidence 8999999999999999998765 678888875
No 401
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=73.77 E-value=3.6 Score=39.17 Aligned_cols=33 Identities=24% Similarity=0.169 Sum_probs=29.0
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+++++|+|+|.+|..+|..|+..+ .+|++++.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~G--------------A~Viv~D~ 296 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAG--------------ARVIVTEI 296 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEcC
Confidence 3479999999999999999999887 88988875
No 402
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=73.62 E-value=4.1 Score=37.45 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
.+|+|+|+|.+|+.+|..|...+. .+|+++++..
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~G~-------------~~I~v~Dr~G 226 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDLGV-------------KNVVAVDRKG 226 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-------------CEEEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHhCCC-------------CeEEEEECCC
Confidence 599999999999999999988761 4899999873
No 403
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=73.41 E-value=3.8 Score=38.32 Aligned_cols=33 Identities=24% Similarity=0.159 Sum_probs=29.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+++|+|+|.|.+|..+|..+..++ .+|++++.
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~G--------------a~Viv~D~ 251 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMG--------------SIVYVTEI 251 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCC--------------CEEEEEeC
Confidence 3479999999999999999998887 88888875
No 404
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=73.30 E-value=4.3 Score=34.66 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=29.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|.|||.|..|..+|..|++.+ .+|++.++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G--------------~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG--------------HEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 369999999999999999998876 789999874
No 405
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=73.12 E-value=3.7 Score=35.54 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=28.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|+|.|+|..|..++..|.+.+ .+|+.+.+.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g--------------~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG--------------HEVTGLRRS 35 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECT
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 48999999999999999998866 788888875
No 406
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=72.90 E-value=8 Score=34.38 Aligned_cols=100 Identities=19% Similarity=0.136 Sum_probs=66.5
Q ss_pred CCEEEEcCCCC---------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC--
Q 018671 24 YDKLVIALGAE---------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG-- 92 (352)
Q Consensus 24 yD~LViAtGs~---------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG-- 92 (352)
+|.+|+=+-.. ...|-|.|...+.++...+.|...+++++. . -++++|++||.+
T Consensus 95 ~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g------~---------l~gl~va~vGD~~~ 159 (307)
T 2i6u_A 95 VDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAERKG------A---------LRGLRLSYFGDGAN 159 (307)
T ss_dssp EEEEEEECSSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHHHHHS------C---------CTTCEEEEESCTTS
T ss_pred CCEEEEecCChhHHHHHHhhCCCCEEcCCCCCcCccHHHHHHHHHHHHhC------C---------cCCeEEEEECCCCc
Confidence 57777765431 123334444456677777788888877641 1 134699999986
Q ss_pred hHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEE
Q 018671 93 PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRL 154 (352)
Q Consensus 93 ~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v 154 (352)
.++-.++..++.++ .+|+++.+..+.| ++++.+.+++..++.|.++
T Consensus 160 rva~Sl~~~~~~~g--------------~~v~~~~P~~~~~--~~~~~~~~~~~a~~~G~~~ 205 (307)
T 2i6u_A 160 NMAHSLLLGGVTAG--------------IHVTVAAPEGFLP--DPSVRAAAERRAQDTGASV 205 (307)
T ss_dssp HHHHHHHHHHHHTT--------------CEEEEECCTTSCC--CHHHHHHHHHHHHHHTCCE
T ss_pred CcHHHHHHHHHHCC--------------CEEEEECCccccC--CHHHHHHHHHHHHHcCCeE
Confidence 67777777777776 8999999876655 4556666666666777543
No 407
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=72.90 E-value=3.7 Score=34.29 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=27.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|.|||+|..|..+|..|.+.+ .+|+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g--------------~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSG--------------FKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 58999999999999999998765 678888763
No 408
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=72.83 E-value=3.5 Score=36.29 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=28.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|.|||.|..|..+|..|.+.+ .+|+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G--------------~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG--------------YLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCC--------------CeEEEEcCC
Confidence 58999999999999999998876 789998763
No 409
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=72.73 E-value=9 Score=33.95 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=28.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.+|.|||.|..|..+|..|++.+ . +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G--------------~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAG--------------AIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS--------------CCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCC--------------CCeEEEEcCC
Confidence 58999999999999999999876 6 89998863
No 410
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=72.59 E-value=3.7 Score=39.05 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|.|||.|..|.-+|..|++.+ .+|++++..
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G--------------~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIG--------------HDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhCC--------------CEEEEEECC
Confidence 48999999999999999999877 789999864
No 411
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=72.45 E-value=4 Score=37.54 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=29.0
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++|+|+|+|.+|..++..+..++ .+|+++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--------------a~V~~~d~~ 204 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--------------AVVMATDVR 204 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 3579999999999999999888877 788888864
No 412
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=72.36 E-value=4.1 Score=38.55 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=30.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..++|.|||+|..|..+|..++..+ .+|++++..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG--------------~~V~l~D~~ 86 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAG--------------IETFLVVRN 86 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEECc
Confidence 3468999999999999999999876 899999875
No 413
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=72.16 E-value=4.3 Score=40.15 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=28.8
Q ss_pred CCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 215 SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 215 ~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
..|++||+|+|+... ....+..+.-+|++++++++..+.
T Consensus 430 ~I~GLyAaGe~a~~~-------~~r~~~~sl~~G~~ag~~aa~~~~ 468 (643)
T 1jnr_A 430 TVKGLFAIGDCAGAN-------PHKFSSGSFTEGRIAAKAAVRFIL 468 (643)
T ss_dssp SSBTEEECGGGBCSC-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCEEeeecccccc-------ccccchhHHHHHHHHHHHHHHHHh
Confidence 799999999998631 123445678889999888877654
No 414
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=72.06 E-value=3.8 Score=38.67 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+|.|||.|..|.-+|..|++.+ .+|++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G--------------~~V~~~D~~ 34 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELG--------------ANVRCIDTD 34 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhcC--------------CEEEEEECC
Confidence 8999999999999999999876 799999864
No 415
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=71.80 E-value=4.5 Score=37.01 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=28.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|.|+|+|..|..++.++.+++ .+|.++++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG--------------~~viv~d~~ 44 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMG--------------YKVVVLDPS 44 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 369999999999999999999887 777777764
No 416
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=71.72 E-value=4 Score=36.44 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=29.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..++|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G--------------~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAG--------------YALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCC--------------CeEEEEcCC
Confidence 3458999999999999999999876 789988763
No 417
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=71.69 E-value=4.4 Score=38.68 Aligned_cols=7 Identities=29% Similarity=0.543 Sum_probs=3.9
Q ss_pred CCeEeec
Q 018671 305 KGLSLAG 311 (352)
Q Consensus 305 ~~~~~~G 311 (352)
.++.|.|
T Consensus 419 ~~L~fAG 425 (520)
T 1s3e_A 419 DRIYFAG 425 (520)
T ss_dssp TTEEECS
T ss_pred CCEEEee
Confidence 3466666
No 418
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=71.57 E-value=4.4 Score=37.93 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+++|+|+|.|.+|..+|..+..++ .+|+++++.
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~G--------------a~Viv~D~~ 243 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFG--------------ARVVVTEVD 243 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC--------------CEEEEECCC
Confidence 579999999999999999999887 899988763
No 419
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=71.44 E-value=4.1 Score=36.07 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=28.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.++++|+|+|.+|..+|..|.+.+ . +|+++++.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G--------------~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTA--------------AERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT--------------CSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCC--------------CCEEEEEeCC
Confidence 368999999999999999998765 5 89998763
No 420
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=71.22 E-value=4.5 Score=38.04 Aligned_cols=33 Identities=24% Similarity=0.153 Sum_probs=29.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+++|+|+|.|.+|..+|..+..++ .+|++.+.
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafG--------------a~Viv~d~ 278 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAG--------------ARVKVTEV 278 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCC--------------CEEEEEeC
Confidence 4579999999999999999998887 89988875
No 421
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=71.21 E-value=4.8 Score=36.66 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=28.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++|+|+|+|.+|..++..+..++ .+|+++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G--------------a~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG--------------AQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 369999999999999999998877 789999864
No 422
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=71.18 E-value=3.5 Score=39.80 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
.+|+|||+|..|+|+|..|+..+- .+++|++...
T Consensus 33 ~~VlvvG~GGlGseiak~La~aGV-------------g~itlvD~D~ 66 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLPGI-------------GSFTIIDGNQ 66 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-------------SEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC-------------CeEEEEeCCE
Confidence 599999999999999999998772 5899998764
No 423
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=71.08 E-value=2.7 Score=39.25 Aligned_cols=42 Identities=19% Similarity=0.098 Sum_probs=34.2
Q ss_pred CccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHH
Q 018671 209 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 254 (352)
Q Consensus 209 ~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~ 254 (352)
.+|+++..|++|++|.+..+..+.|+ -.-|.|...|..|++.
T Consensus 375 ~tmesk~~~gLy~aGE~lD~~~~~GG----ynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 375 RTMQAKEVPGLYFVGECVDVTGWLGG----YNFQWAWASGFVAGQD 416 (417)
T ss_dssp TTCBBTTSTTEEECGGGBSEEECSSS----HHHHHHHHHHHHHHHH
T ss_pred hhccccCCCCeEEEEEeEecccCCCC----HHHHHHHHHHHHHhCc
Confidence 36999899999999999988777774 3568888889877764
No 424
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.06 E-value=3.7 Score=36.69 Aligned_cols=36 Identities=17% Similarity=0.090 Sum_probs=26.9
Q ss_pred hccCCcEEEECC-ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 80 KSRLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 80 ~~~~~~vvVvGg-G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..+.++|+|.|| |.+|..++..|.+.+ .+|+.+.+.
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G--------------~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQG--------------RTVRGFDLR 52 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTT--------------CCEEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 345579999997 999999999998876 778888764
No 425
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=70.99 E-value=10 Score=35.65 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=29.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
-++.|||.|..|.-+|..|++.+ .+|++++..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G--------------~~V~~~D~~ 40 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFG--------------HEVVCVDKD 40 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred eEEEEEcCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 38999999999999999999877 899999875
No 426
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=70.90 E-value=3.4 Score=38.45 Aligned_cols=43 Identities=16% Similarity=0.047 Sum_probs=35.5
Q ss_pred CCccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 018671 208 DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 208 d~~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~~ 260 (352)
+.+|+++..+|+|++|+.+.+ .--..|..||-.++.|....+.
T Consensus 320 ~~tle~k~~~~Lf~AGqi~G~----------~Gy~eAaa~Gl~AG~naa~~~~ 362 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLAGV----------EGYLESAATGFLAGLNAARKAL 362 (443)
T ss_dssp CTTSEETTEEEEEECGGGGTB----------CSHHHHHHHHHHHHHHHHHHHT
T ss_pred ChhceecCCCCEEECcccccc----------HHHHHHHHhHHHHHHHHHHHhc
Confidence 478999889999999999964 2234788999999999988765
No 427
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=70.83 E-value=5.3 Score=32.32 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=28.0
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGg-G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|+|.|+ |.+|..++..|.+.+ .+|+++.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--------------~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--------------YEVTVLVRD 36 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--------------CeEEEEEeC
Confidence 48999997 999999999998865 789999875
No 428
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=70.82 E-value=8.4 Score=34.55 Aligned_cols=100 Identities=6% Similarity=0.041 Sum_probs=67.5
Q ss_pred CCEEEEcCCCC---------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC--
Q 018671 24 YDKLVIALGAE---------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG-- 92 (352)
Q Consensus 24 yD~LViAtGs~---------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG-- 92 (352)
+|.+|+=+-.. ...|-|.|...+.++...+.|...+++++. . -++++|++||.|
T Consensus 114 ~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g------~---------l~gl~va~vGD~~~ 178 (325)
T 1vlv_A 114 VDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIEENFG------R---------LKGVKVVFMGDTRN 178 (325)
T ss_dssp CSEEEEESSCHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHHHHHS------C---------STTCEEEEESCTTS
T ss_pred CCEEEEECCChHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhC------C---------cCCcEEEEECCCCc
Confidence 68888866532 123434444456677777788888877641 1 134699999985
Q ss_pred hHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEE
Q 018671 93 PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRL 154 (352)
Q Consensus 93 ~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v 154 (352)
.++-.++..++.++ .+|+++.+..+.| ++++.+.+++..++.|.++
T Consensus 179 rva~Sl~~~~~~~G--------------~~v~~~~P~~~~p--~~~~~~~~~~~a~~~G~~v 224 (325)
T 1vlv_A 179 NVATSLMIACAKMG--------------MNFVACGPEELKP--RSDVFKRCQEIVKETDGSV 224 (325)
T ss_dssp HHHHHHHHHHHHTT--------------CEEEEESCGGGCC--CHHHHHHHHHHHHHHCCEE
T ss_pred CcHHHHHHHHHHCC--------------CEEEEECCccccC--CHHHHHHHHHHHHHcCCeE
Confidence 67777777777776 8999999876554 4556666666667778654
No 429
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=70.71 E-value=4.5 Score=35.34 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=28.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G--------------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG--------------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC--------------CeEEEEcCC
Confidence 38999999999999999999876 789998875
No 430
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=70.68 E-value=4.8 Score=36.81 Aligned_cols=32 Identities=16% Similarity=0.114 Sum_probs=28.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
+++|+|+|.|..|..+|..|.+.+ .+|++.+.
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~G--------------akVvv~D~ 204 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEG--------------AKLVVTDV 204 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred cCEEEEECchHHHHHHHHHHHHCC--------------CEEEEEcC
Confidence 479999999999999999999887 78887664
No 431
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=70.61 E-value=4.6 Score=36.11 Aligned_cols=31 Identities=23% Similarity=0.187 Sum_probs=26.8
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc--EEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~--~V~lv~~~ 129 (352)
+|+|||+|..|.-+|..|+..+ . +|++++..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g--------------~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKG--------------FAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT--------------CCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCC--------------CCCeEEEEeCC
Confidence 7999999999999999988755 4 89999864
No 432
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=70.51 E-value=5.1 Score=35.60 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=27.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
..+|+|||+|..|..+|..++..+. ..+|.|++..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~------------~~ev~L~Di~ 48 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGI------------ADRLVLLDLS 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC------------CSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC------------CCEEEEEcCC
Confidence 3589999999999999998875440 1489999875
No 433
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=70.47 E-value=5 Score=35.01 Aligned_cols=33 Identities=15% Similarity=0.366 Sum_probs=29.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++++|+|+|-+|--+|..|.+.+ .+|+++.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G--------------~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG--------------LQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 469999999999999999999876 799999875
No 434
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=70.45 E-value=4.4 Score=36.23 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=27.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||+|.+|..+|..|+.... ..+|.+++..
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~------------~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQT------------ANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------------SSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------------CCEEEEEeCC
Confidence 489999999999999999876530 1389999875
No 435
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=70.30 E-value=2.7 Score=40.90 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=36.8
Q ss_pred CCccccCCcccc-----CCCCCEEEEccccccccCCCCcCCCCc-hHHHHHHHHHHHHHHHHHh
Q 018671 202 GGRIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPAL-AQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 202 ~G~i~Vd~~l~~-----~~~~~IfaiGD~a~~~~~~~~~~~~~~-~~~A~~qg~~~a~~i~~~~ 259 (352)
.|.|.||+..|+ +..|++||+|.++.-. .|...++.. ...|+-.|++++++++...
T Consensus 507 ~GGl~id~~~~vl~~~g~~I~GLyAaGe~~~g~--~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 507 MGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGV--HGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp CCEEEBCTTCEEECTTSCEEEEEEECSTTEESS--STTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCeEECCCceEECCCCCCcCCcEeceEcCCCC--cCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 366888887774 3579999999997522 232233322 2356778999999886543
No 436
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=70.27 E-value=11 Score=33.74 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=67.5
Q ss_pred CCEEEEcCCCC---------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECC-Ch
Q 018671 24 YDKLVIALGAE---------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG-GP 93 (352)
Q Consensus 24 yD~LViAtGs~---------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGg-G~ 93 (352)
+|.+|+=+-.. ...|-|.|...+.++...+.|...+++++. . -++++|++||. +.
T Consensus 102 ~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g------~---------l~gl~va~vGD~~r 166 (315)
T 1pvv_A 102 VDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWEKKG------T---------IKGVKVVYVGDGNN 166 (315)
T ss_dssp CSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHS------C---------CTTCEEEEESCCCH
T ss_pred CcEEEEecCchHHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHHHHhC------C---------cCCcEEEEECCCcc
Confidence 68888876532 223334444556677777888888877641 1 13469999997 66
Q ss_pred HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEE
Q 018671 94 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRL 154 (352)
Q Consensus 94 ~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v 154 (352)
++-.++..++.++ .+|+++.+..+.| ++++.+.+.+..++.|.++
T Consensus 167 va~Sl~~~~~~~g--------------~~v~~~~P~~~~~--~~~~~~~~~~~a~~~g~~~ 211 (315)
T 1pvv_A 167 VAHSLMIAGTKLG--------------ADVVVATPEGYEP--DEKVIKWAEQNAAESGGSF 211 (315)
T ss_dssp HHHHHHHHHHHTT--------------CEEEEECCTTCCC--CHHHHHHHHHHHHHHTCEE
T ss_pred hHHHHHHHHHHCC--------------CEEEEECCccccC--CHHHHHHHHHHHHHcCCeE
Confidence 6777777777766 8999999876655 4556666666666778654
No 437
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=70.23 E-value=4.3 Score=35.08 Aligned_cols=70 Identities=19% Similarity=0.061 Sum_probs=48.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
++|+|.|+|..|..++..|.+.+ .+|+.+.+.. .. .+.+...+++++...+.+++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g--------------~~V~~~~r~~------~~-----~~~~~~~~~~~~~~D~~d~~ 60 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQG--------------WRIIGTSRNP------DQ-----MEAIRASGAEPLLWPGEEPS 60 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGT--------------CEEEEEESCG------GG-----HHHHHHTTEEEEESSSSCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHCC--------------CEEEEEEcCh------hh-----hhhHhhCCCeEEEecccccc
Confidence 48999999999999999998765 7899888742 11 12344567777665333321
Q ss_pred CCeEEEcCCcEEecceEEEecCCCc
Q 018671 164 SQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 164 ~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
+ -.+|.||.++|...
T Consensus 61 -----~-----~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 61 -----L-----DGVTHLLISTAPDS 75 (286)
T ss_dssp -----C-----TTCCEEEECCCCBT
T ss_pred -----c-----CCCCEEEECCCccc
Confidence 1 13799999888653
No 438
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=70.06 E-value=3.8 Score=35.66 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=28.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++++|+|+|-+|..+|..|.+.+ .+|+++++.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G--------------~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQ--------------QNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTT--------------CEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 368999999999999999998876 799999864
No 439
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=70.05 E-value=5 Score=36.06 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=27.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.+|+|||+|..|.-+|..++..+ . +|+|++..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g--------------~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKD--------------LGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECC
Confidence 48999999999999999888755 4 79999875
No 440
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=69.89 E-value=16 Score=31.60 Aligned_cols=82 Identities=13% Similarity=0.144 Sum_probs=48.5
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcH-HHHHHHHHHHHhCCCEEEeCceEE
Q 018671 84 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDD-RLRHYATTQLSKSGVRLVRGIVKD 161 (352)
Q Consensus 84 ~~vvVvGg-G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~-~~~~~~~~~l~~~gV~v~~~~V~~ 161 (352)
++|+|.|| |..|-.++..|.+.+ .+|+++.+...- ...+ +-.+.+ +.+...+++++...+.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g--------------~~V~~~~R~~~~-~~~~~~~~~~~-~~l~~~~v~~v~~D~~d 66 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG--------------NPTYALVRKTIT-AANPETKEELI-DNYQSLGVILLEGDIND 66 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT--------------CCEEEEECCSCC-SSCHHHHHHHH-HHHHHTTCEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC--------------CcEEEEECCCcc-cCChHHHHHHH-HHHHhCCCEEEEeCCCC
Confidence 48999996 999999999998866 788888775311 1122 222222 34556788766442211
Q ss_pred EECCeEE-EcCCcEEecceEEEecCCC
Q 018671 162 VDSQKLI-LNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 162 v~~~~v~-~~~g~~i~~D~vi~a~G~~ 187 (352)
. +.+. .-. .+|.||.++|..
T Consensus 67 ~--~~l~~~~~----~~d~vi~~a~~~ 87 (307)
T 2gas_A 67 H--ETLVKAIK----QVDIVICAAGRL 87 (307)
T ss_dssp H--HHHHHHHT----TCSEEEECSSSS
T ss_pred H--HHHHHHHh----CCCEEEECCccc
Confidence 0 0100 001 278888888864
No 441
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=69.86 E-value=4 Score=41.52 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=31.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
+..+|+|||+|-.|+++|..|+..+- .+++|++...
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~Gv-------------g~i~l~D~d~ 445 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALSGF-------------RQIHVIDMDT 445 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTTTC-------------CEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCC-------------CcEEEECCCe
Confidence 56799999999999999999998772 5999998864
No 442
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=69.80 E-value=4.1 Score=38.14 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+|.|||.|..|..+|..|++.+ .+|++++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G--------------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG--------------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 7999999999999999999876 789999764
No 443
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=69.76 E-value=4.9 Score=38.38 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=29.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++|+|+|.|.+|..+|..+..++ .+|+++++.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~G--------------a~Viv~d~~ 306 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQG--------------ARVSVTEID 306 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 4579999999999999999998876 789888753
No 444
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=69.45 E-value=5 Score=37.36 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=27.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+++|.|+|+|..|.+++.++.+++ .+|.++++.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG--------------~~v~v~d~~ 67 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMG--------------YRVAVLDPD 67 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEECCC
Confidence 468999999999999999999887 677777653
No 445
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=69.44 E-value=5.7 Score=35.51 Aligned_cols=33 Identities=6% Similarity=0.080 Sum_probs=28.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.++++|+|+|-+|-.+|..|++.+ . +|+++.+.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~G--------------a~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDG--------------VKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCC--------------CCEEEEEECC
Confidence 469999999999999999998876 5 89999875
No 446
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=69.36 E-value=4.4 Score=36.04 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=27.2
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+|+|||+|..|.-+|..|+... ...+|++++..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~------------~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQ------------LARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT------------CCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCC------------CCCEEEEEeCC
Confidence 7999999999999999988631 02789999875
No 447
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=69.35 E-value=5.7 Score=35.71 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=27.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+|+|||+|..|..+|..|+.... ..+|++++.
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~------------~~~l~l~D~ 38 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGI------------TDELVVIDV 38 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC------------CSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------------CceEEEEec
Confidence 589999999999999999987541 038999985
No 448
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=69.34 E-value=5.1 Score=34.89 Aligned_cols=33 Identities=18% Similarity=0.056 Sum_probs=28.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++++|||+|..|-.+|..|.+.+ .+|+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g--------------~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEG--------------AKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcC--------------CEEEEEECC
Confidence 358999999999999999998866 688888763
No 449
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=69.10 E-value=4.7 Score=35.91 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=26.8
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
+|.|||+|..|.-+|..|++.+ .+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g--------------~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG--------------NEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC--------------CEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCC--------------CeEEEEEc
Confidence 6999999999999999998765 78999875
No 450
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=68.83 E-value=5.6 Score=34.93 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=27.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.++++|+|+|-+|..++..|++.+ . +|+++.+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G--------------~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHG--------------VQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--------------CCEEEEEECC
Confidence 469999999999999999998876 5 79998764
No 451
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=68.80 E-value=12 Score=33.76 Aligned_cols=101 Identities=11% Similarity=0.047 Sum_probs=67.4
Q ss_pred CCEEEEcCCCC---------CCCCCCCCccccCcCCCCHHHHHHHHHH-HHHHHhhccCCCCCHHHhccCCcEEEECCC-
Q 018671 24 YDKLVIALGAE---------ASTFGIHGVKENATFLREVHHAQEIRRK-LLLNLMLSDVPGISEEEKSRLLHCVVVGGG- 92 (352)
Q Consensus 24 yD~LViAtGs~---------~~~~~ipG~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG- 92 (352)
+|.+|+=+-.. ...|-|.|...+.++...+.|...++++ +.. . -++++|++||.+
T Consensus 100 ~D~IviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQ~LaDl~Ti~e~~~g~-----~---------l~gl~ia~vGD~~ 165 (333)
T 1duv_G 100 YDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGK-----A---------FNEMTLVYAGDAR 165 (333)
T ss_dssp CSEEEEECSCHHHHHHHHHHHSSCEEESCCSSCCHHHHHHHHHHHHHHSTTC-----C---------GGGCEEEEESCTT
T ss_pred CCEEEEEcCCchHHHHHHHhCCCCeEcCCCCCCCchHHHHHHHHHHHHhcCC-----C---------CCCcEEEEECCCc
Confidence 78888876532 1233344444566677777777777765 310 0 134699999986
Q ss_pred -hHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEE
Q 018671 93 -PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRL 154 (352)
Q Consensus 93 -~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v 154 (352)
.++-.++..++.++ .+|+++.+..+.| ++++.+.+++..++.|.++
T Consensus 166 ~~va~Sl~~~~~~~G--------------~~v~~~~P~~~~p--~~~~~~~~~~~a~~~G~~v 212 (333)
T 1duv_G 166 NNMGNSMLEAAALTG--------------LDLRLVAPQACWP--EAALVTECRALAQQNGGNI 212 (333)
T ss_dssp SHHHHHHHHHHHHHC--------------CEEEEECCGGGCC--CHHHHHHHHHHHHHTTCEE
T ss_pred cchHHHHHHHHHHcC--------------CEEEEECCcccCC--CHHHHHHHHHHHHHcCCeE
Confidence 67777777777776 8999999876554 4567677777777888655
No 452
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=68.80 E-value=5.4 Score=35.84 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=27.8
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
...+|+|||+|..|..+|..|+.... ..+++|++.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~------------~~el~l~D~ 42 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGI------------AQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTC------------CSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC------------CCeEEEEeC
Confidence 34599999999999999999886541 138999986
No 453
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=68.72 E-value=5.6 Score=35.57 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
++|+|||+|..|..+|..++..+ . +|++++..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g--------------~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE--------------LADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEecc
Confidence 48999999999999999998754 5 89999863
No 454
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=68.56 E-value=5.4 Score=32.86 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=26.8
Q ss_pred cEEEEC-CChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 85 HCVVVG-GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 85 ~vvVvG-gG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+|.|+| +|..|..+|..|.+.+ .+|+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g--------------~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLG--------------HEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT--------------CEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 689999 9999999999998765 789998864
No 455
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=68.54 E-value=5.6 Score=36.26 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=20.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhH
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFI 106 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~ 106 (352)
++|+|+|+|.+|.+++.++.+++
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G 24 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG 24 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC
Confidence 48999999999999999988876
No 456
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=68.48 E-value=5.2 Score=36.03 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=28.6
Q ss_pred hccCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 80 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 80 ~~~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.....+|+|||+|..|..+|..++.... ..++.|++.
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~------------~~el~L~Di 52 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDL------------ADELALVDV 52 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTC------------CSEEEEECS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCC------------CceEEEEeC
Confidence 3455799999999999999998876531 148999985
No 457
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=68.38 E-value=5.4 Score=35.16 Aligned_cols=32 Identities=19% Similarity=0.145 Sum_probs=28.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G--------------~~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAG--------------LSTWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--------------CeEEEEECC
Confidence 48999999999999999999876 789998763
No 458
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=68.37 E-value=4.2 Score=40.26 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 130 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 130 (352)
-.++|||+|..++-+|..++..+ ++|.++++..
T Consensus 9 ~D~~i~GtGl~~~~~a~~~~~~g--------------~~vl~id~~~ 41 (650)
T 1vg0_A 9 FDVIVIGTGLPESIIAAACSRSG--------------QRVLHVDSRS 41 (650)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCC--------------CEEEEEcCCC
Confidence 37999999999999999999987 8999999874
No 459
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=68.17 E-value=5.9 Score=34.80 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=28.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.++++|+|+|-+|-.++..|.+.+ . +|+++.+.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G--------------~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNF--------------AKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTT--------------CSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcC--------------CCEEEEEeCC
Confidence 469999999999999999998876 4 89999864
No 460
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=68.01 E-value=6.4 Score=32.46 Aligned_cols=71 Identities=13% Similarity=0.005 Sum_probs=45.9
Q ss_pred cEEEECC-ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 85 HCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 85 ~vvVvGg-G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
+|+|.|| |.+|..++..|.+.+ .+|+++.+.. ... +.+...+++++...+.+.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g--------------~~V~~~~R~~------~~~-----~~~~~~~~~~~~~D~~d~~ 56 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG--------------HEVLAVVRDP------QKA-----ADRLGATVATLVKEPLVLT 56 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESCH------HHH-----HHHTCTTSEEEECCGGGCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC--------------CEEEEEEecc------ccc-----ccccCCCceEEeccccccc
Confidence 6899997 999999999998876 7999998641 111 1233456776654222111
Q ss_pred CCeEEEcCCcEEecceEEEecCCC
Q 018671 164 SQKLILNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 164 ~~~v~~~~g~~i~~D~vi~a~G~~ 187 (352)
. ..- -.+|.||.+.|..
T Consensus 57 ~---~~~----~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 57 E---ADL----DSVDAVVDALSVP 73 (224)
T ss_dssp H---HHH----TTCSEEEECCCCC
T ss_pred H---hhc----ccCCEEEECCccC
Confidence 1 000 1379999999875
No 461
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=67.96 E-value=5.8 Score=35.70 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=29.5
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++|.|||.|..|..+|..++..+ .+|+.+++.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G--------------~~V~~~d~~ 182 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFN--------------MRILYYSRT 182 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC--------------CEEEEECCC
Confidence 3568999999999999999998876 789888764
No 462
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=67.94 E-value=5.1 Score=37.32 Aligned_cols=10 Identities=30% Similarity=0.182 Sum_probs=4.8
Q ss_pred HHHHHHHHHH
Q 018671 138 RLRHYATTQL 147 (352)
Q Consensus 138 ~~~~~~~~~l 147 (352)
.+.+.+.+.+
T Consensus 236 ~l~~~l~~~l 245 (470)
T 3i6d_A 236 TLVEEIEKQL 245 (470)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 4444455544
No 463
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=67.78 E-value=3.4 Score=40.79 Aligned_cols=56 Identities=18% Similarity=0.090 Sum_probs=35.0
Q ss_pred CccccCCcccc--------CCCCCEEEEccccccccCCCCcCCCC-chHHHHHHHHHHHHHHHHHh
Q 018671 203 GRIGIDEWLRV--------PSVQDVFAVGDCSGYLESTGKTVLPA-LAQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 203 G~i~Vd~~l~~--------~~~~~IfaiGD~a~~~~~~~~~~~~~-~~~~A~~qg~~~a~~i~~~~ 259 (352)
|.|.||...|+ +..|++||+|+|+... ..|...+.. +...++--|+.++++++...
T Consensus 368 GGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g-~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 432 (621)
T 2h88_A 368 GGIPTNYKGQVITHVNGEDKVVPGLYACGEAASAS-VHGANRLGANSLLDLVVFGRACALTIAETC 432 (621)
T ss_dssp CBEEBCTTSEEEEEETTEEEEEEEEEECGGGEECS-SSTTSCCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEeECCCCeEeecccCCCcccCceEEcccccccc-ccCCCCCchHhHHHHHHHHHHHHHHHHHhh
Confidence 56777776653 2589999999986311 112222222 23456777999998887654
No 464
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=67.77 E-value=6.1 Score=35.40 Aligned_cols=33 Identities=21% Similarity=0.187 Sum_probs=27.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|+|||+|..|.-+|..++..+ -.+|.|++..
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g-------------~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKN-------------LGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-------------CCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-------------CCeEEEEeCC
Confidence 48999999999999999998754 1279999865
No 465
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=67.76 E-value=11 Score=33.95 Aligned_cols=100 Identities=13% Similarity=0.125 Sum_probs=64.2
Q ss_pred CCEEEEcCCCC---------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC-h
Q 018671 24 YDKLVIALGAE---------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG-P 93 (352)
Q Consensus 24 yD~LViAtGs~---------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG-~ 93 (352)
+|.+|+=+-.. ...|-|.+...+.++...+.|...+++++. . -++++|++||.+ .
T Consensus 126 ~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~E~~G------~---------l~glkva~vGD~~n 190 (340)
T 4ep1_A 126 IDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYEETN------T---------FKGIKLAYVGDGNN 190 (340)
T ss_dssp CSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHS------C---------CTTCEEEEESCCCH
T ss_pred CCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhC------C---------CCCCEEEEECCCch
Confidence 78888876632 122333333445566667778877777641 1 234799999965 4
Q ss_pred HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEE
Q 018671 94 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRL 154 (352)
Q Consensus 94 ~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v 154 (352)
++-.++..++.++ .+|+++.+..+.| ++.+.+.+.+..++.|.++
T Consensus 191 va~Sl~~~~~~~G--------------~~v~~~~P~~~~~--~~~~~~~~~~~a~~~G~~v 235 (340)
T 4ep1_A 191 VCHSLLLASAKVG--------------MHMTVATPVGYRP--NEEIVKKALAIAKETGAEI 235 (340)
T ss_dssp HHHHHHHHHHHHT--------------CEEEEECCTTCCC--CHHHHHHHHHHHHHHCCCE
T ss_pred hHHHHHHHHHHcC--------------CEEEEECCcccCC--CHHHHHHHHHHHHHcCCeE
Confidence 4555666666665 8999999876554 4666666666666777544
No 466
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=67.70 E-value=5 Score=37.93 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=47.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEE
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 161 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~ 161 (352)
..++|+|+|||.+|..+|..|.+. .+|.+++.. ++-.+.+.+.|. +..++.+..+
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~~---------------~~v~iIE~d-------~~r~~~la~~l~--~~~Vi~GD~t- 288 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQT---------------YSVKLIERN-------LQRAEKLSEELE--NTIVFCGDAA- 288 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTT---------------SEEEEEESC-------HHHHHHHHHHCT--TSEEEESCTT-
T ss_pred cccEEEEEcchHHHHHHHHHhhhc---------------CceEEEecC-------HHHHHHHHHHCC--CceEEecccc-
Confidence 346999999999999999988432 689999863 333344444332 3433333100
Q ss_pred EECCeEEEcCCcEEecceEEEecCCCcc
Q 018671 162 VDSQKLILNDGTEVPYGLLVWSTGVGPS 189 (352)
Q Consensus 162 v~~~~v~~~~g~~i~~D~vi~a~G~~~~ 189 (352)
+.-.+.+-..-.+|.++.+|+..-.
T Consensus 289 ---d~~~L~ee~i~~~D~~ia~T~~De~ 313 (461)
T 4g65_A 289 ---DQELLTEENIDQVDVFIALTNEDET 313 (461)
T ss_dssp ---CHHHHHHTTGGGCSEEEECCSCHHH
T ss_pred ---chhhHhhcCchhhcEEEEcccCcHH
Confidence 0000111112458999999987543
No 467
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=67.59 E-value=6.6 Score=32.19 Aligned_cols=71 Identities=20% Similarity=0.239 Sum_probs=45.4
Q ss_pred cEEEECC-ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 85 HCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 85 ~vvVvGg-G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
+|+|.|| |.+|..++..|.+.+ .+|+++.+.. ... +.+. .+++++...+.+.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g--------------~~V~~~~R~~------~~~-----~~~~-~~~~~~~~D~~d~~ 55 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG--------------HEVTAIVRNA------GKI-----TQTH-KDINILQKDIFDLT 55 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESCS------HHH-----HHHC-SSSEEEECCGGGCC
T ss_pred eEEEEcCCchhHHHHHHHHHhCC--------------CEEEEEEcCc------hhh-----hhcc-CCCeEEeccccChh
Confidence 6899995 999999999998876 8999998752 111 1122 56766544222111
Q ss_pred CCeEEEcCCcEEecceEEEecCCCc
Q 018671 164 SQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 164 ~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
. .. .-.+|.||.+.|..+
T Consensus 56 --~-~~----~~~~d~vi~~ag~~~ 73 (221)
T 3ew7_A 56 --L-SD----LSDQNVVVDAYGISP 73 (221)
T ss_dssp --H-HH----HTTCSEEEECCCSST
T ss_pred --h-hh----hcCCCEEEECCcCCc
Confidence 1 00 013799999998753
No 468
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=67.58 E-value=5.9 Score=35.09 Aligned_cols=34 Identities=26% Similarity=0.152 Sum_probs=28.5
Q ss_pred cCCcEEEECCCh-HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGP-TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~-~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++++|||+|. .|.-+|..|...+ ..||++++.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~g--------------AtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNN--------------ATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--------------CEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 347999999995 7999999998876 899999753
No 469
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=67.45 E-value=6 Score=34.31 Aligned_cols=33 Identities=18% Similarity=0.142 Sum_probs=26.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
++|.|||.|..|..+|..|.+.+. ..+|+++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~------------~~~V~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF------------KGKIYGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC------------CSEEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC------------CcEEEEEeC
Confidence 379999999999999999987650 037888875
No 470
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=67.40 E-value=2.7 Score=35.53 Aligned_cols=73 Identities=21% Similarity=0.191 Sum_probs=44.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEEE
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 163 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 163 (352)
++++|+|+|..|..+|..|.+.+ . |+++++.. +.. +.+. .|+.++.+..++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g--------------~-v~vid~~~-------~~~----~~~~-~~~~~i~gd~~~~- 61 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSE--------------V-FVLAEDEN-------VRK----KVLR-SGANFVHGDPTRV- 61 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSE--------------E-EEEESCGG-------GHH----HHHH-TTCEEEESCTTCH-
T ss_pred CEEEEECCChHHHHHHHHHHhCC--------------e-EEEEECCH-------HHH----HHHh-cCCeEEEcCCCCH-
Confidence 48999999999999999987654 7 88887531 211 2233 5777665521100
Q ss_pred CCeEEEcCCcEEecceEEEecCCC
Q 018671 164 SQKLILNDGTEVPYGLLVWSTGVG 187 (352)
Q Consensus 164 ~~~v~~~~g~~i~~D~vi~a~G~~ 187 (352)
+.+. .-+ .-.+|.+|++++..
T Consensus 62 -~~l~-~a~-i~~ad~vi~~~~~d 82 (234)
T 2aef_A 62 -SDLE-KAN-VRGARAVIVDLESD 82 (234)
T ss_dssp -HHHH-HTT-CTTCSEEEECCSCH
T ss_pred -HHHH-hcC-cchhcEEEEcCCCc
Confidence 0000 001 12489999998764
No 471
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=67.33 E-value=4.9 Score=35.09 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=28.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G--------------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG--------------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT--------------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC--------------CeEEEEcCC
Confidence 38999999999999999999876 789998865
No 472
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=66.83 E-value=4.8 Score=37.84 Aligned_cols=6 Identities=17% Similarity=0.451 Sum_probs=3.4
Q ss_pred CeEeec
Q 018671 306 GLSLAG 311 (352)
Q Consensus 306 ~~~~~G 311 (352)
++.|.|
T Consensus 424 ~l~fAG 429 (472)
T 1b37_A 424 RVYFTG 429 (472)
T ss_dssp TEEECS
T ss_pred cEEEee
Confidence 455555
No 473
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=66.68 E-value=6 Score=35.63 Aligned_cols=36 Identities=17% Similarity=0.068 Sum_probs=28.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
...+|+|||+|..|..+|..++..+- -.+|++++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~------------~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDL------------ADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCC------------CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC------------CCeEEEEECC
Confidence 44699999999999999999886540 0389999863
No 474
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=66.61 E-value=7.2 Score=34.79 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=28.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++++|+|+|-+|-.+|..|++.+. .+|+++.+.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~-------------~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGI-------------KEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-------------SEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC-------------CEEEEEECC
Confidence 4699999999999999999988761 389999874
No 475
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=66.57 E-value=2.9 Score=40.96 Aligned_cols=57 Identities=19% Similarity=0.036 Sum_probs=35.6
Q ss_pred CccccCCccccC---------CCCCEEEEccccccccCCCCcCCCCc-hHHHHHHHHHHHHHHHHHhh
Q 018671 203 GRIGIDEWLRVP---------SVQDVFAVGDCSGYLESTGKTVLPAL-AQVAERQGKYLFSLLNRIGK 260 (352)
Q Consensus 203 G~i~Vd~~l~~~---------~~~~IfaiGD~a~~~~~~~~~~~~~~-~~~A~~qg~~~a~~i~~~~~ 260 (352)
|.|.||...|+. ..|++||+|+|+.. ...|...+... ...|+-.|+.++++++....
T Consensus 358 GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe~a~~-g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~ 424 (588)
T 2wdq_A 358 GGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV-SVHGANRLGGNSLLDLVVFGRAAGLHLQESIA 424 (588)
T ss_dssp CBEEBCTTCEEEEECTTSCEEEEEEEEECGGGEEC-SSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHH
T ss_pred ceEEECCCCCCcccccccCCCeeCCceeCcccccc-CCCCCCCCcchhHHHHHHHHHHHHHHHHHhhh
Confidence 668888777762 57999999998631 11122222222 23466778888888776553
No 476
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=66.52 E-value=6.4 Score=34.06 Aligned_cols=30 Identities=23% Similarity=0.214 Sum_probs=26.3
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
+|.|||+|..|..+|..|.+.+ .+|+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG--------------HYLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCC--------------CEEEEEEC
Confidence 7999999999999999998765 68888875
No 477
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=66.48 E-value=6 Score=36.64 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=29.0
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.+++|+|+|+|.+|..+|..+...+ . +|+++++.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G--------------~~~V~v~~r~ 200 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRG--------------VRAVLVANRT 200 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHC--------------CSEEEEECSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCC--------------CCEEEEEeCC
Confidence 5679999999999999999998766 5 88888763
No 478
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=66.47 E-value=6.7 Score=35.69 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=28.4
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+++|+|+|.|.+|..+|..+..++ .+|.+.+.
T Consensus 174 ~GktV~I~G~GnVG~~~A~~l~~~G--------------akVvvsD~ 206 (355)
T 1c1d_A 174 DGLTVLVQGLGAVGGSLASLAAEAG--------------AQLLVADT 206 (355)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC--------------CEEEEEeC
Confidence 3479999999999999999998887 88886654
No 479
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=66.36 E-value=19 Score=32.26 Aligned_cols=109 Identities=11% Similarity=0.040 Sum_probs=66.2
Q ss_pred CCEEEEcCCCC---------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC--
Q 018671 24 YDKLVIALGAE---------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG-- 92 (352)
Q Consensus 24 yD~LViAtGs~---------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG-- 92 (352)
+|.+|+=+-.. ...|-|.+...+.++...+.|...+++++... .. ....-++++|++||-+
T Consensus 101 ~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~~---~~-----~~~~l~gl~va~vGD~~~ 172 (328)
T 3grf_A 101 VDICTARLATKEMMREMAQHASVPCINALDDFGHPLQMVCDFMTIKEKFTAA---GE-----FSNGFKGIKFAYCGDSMN 172 (328)
T ss_dssp CSEEEEECSSHHHHHHHHHHCSSCEEESSCSSCCHHHHHHHHHHHHHHHHHT---TC-----CTTTGGGCCEEEESCCSS
T ss_pred CCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCCc---cc-----cccccCCcEEEEeCCCCc
Confidence 68888876632 22333334444666777778888888775210 00 0001244699999976
Q ss_pred hHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHh--CCCEE
Q 018671 93 PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK--SGVRL 154 (352)
Q Consensus 93 ~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~--~gV~v 154 (352)
.++-.++..++.++ .+|+++.+..+....++++.+.+.+..++ .|.++
T Consensus 173 ~va~Sl~~~~~~~G--------------~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v 222 (328)
T 3grf_A 173 NVTYDLMRGCALLG--------------MECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSI 222 (328)
T ss_dssp HHHHHHHHHHHHHT--------------CEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEE
T ss_pred chHHHHHHHHHHcC--------------CEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeE
Confidence 45555666666665 89999988765412346677777766666 67554
No 480
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=66.32 E-value=13 Score=33.35 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=63.6
Q ss_pred CCEEEEcCCCC---------CCCCCCCCccccCcCCCCHHHHHHHHHHHHHHHhhccCCCCCHHHhccCCcEEEECCC-h
Q 018671 24 YDKLVIALGAE---------ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG-P 93 (352)
Q Consensus 24 yD~LViAtGs~---------~~~~~ipG~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG-~ 93 (352)
+|.+|+=+-.. ...|-|.+...+.++...+.|...+++++. . -++++|++||-+ .
T Consensus 104 ~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g------~---------l~glkva~vGD~~r 168 (323)
T 3gd5_A 104 VDGLAIRTFAQTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIRENFG------R---------LAGLKLAYVGDGNN 168 (323)
T ss_dssp CSEEEEECSSHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHHHHS------C---------CTTCEEEEESCCCH
T ss_pred CCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhC------C---------CCCCEEEEECCCCc
Confidence 78888877642 122333333455566667777777777641 1 234799999965 4
Q ss_pred HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEE
Q 018671 94 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRL 154 (352)
Q Consensus 94 ~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v 154 (352)
++-.++..++.++ .+|+++.+..+.| ++.+.+.+.+..++.|..+
T Consensus 169 va~Sl~~~~~~~G--------------~~v~~~~P~~~~~--~~~~~~~~~~~a~~~g~~v 213 (323)
T 3gd5_A 169 VAHSLLLGCAKVG--------------MSIAVATPEGFTP--DPAVSARASEIAGRTGAEV 213 (323)
T ss_dssp HHHHHHHHHHHHT--------------CEEEEECCTTCCC--CHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHcC--------------CEEEEECCCcccC--CHHHHHHHHHHHHHcCCeE
Confidence 5556666666655 8999999876554 4566666666666666544
No 481
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=65.95 E-value=5.9 Score=35.45 Aligned_cols=30 Identities=27% Similarity=0.296 Sum_probs=27.4
Q ss_pred cEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 85 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 85 ~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
+|.|||+|..|.-+|..|++.+ .+|+++++
T Consensus 16 kI~iIG~G~mG~ala~~L~~~G--------------~~V~~~~r 45 (335)
T 1z82_A 16 RFFVLGAGSWGTVFAQMLHENG--------------EEVILWAR 45 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred cEEEECcCHHHHHHHHHHHhCC--------------CeEEEEeC
Confidence 8999999999999999998866 78999876
No 482
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=65.77 E-value=4.9 Score=36.58 Aligned_cols=31 Identities=19% Similarity=0.153 Sum_probs=27.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+|.|||+|..|.-+|..|++.+ .+|+++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G--------------~~V~l~~r 60 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKG--------------QKVRLWSY 60 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT--------------CCEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHHCC--------------CeEEEEeC
Confidence 48999999999999999999866 78888876
No 483
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=65.70 E-value=6.7 Score=37.23 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=30.0
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++|+|||.|.+|-.+|..+..++ .+|+++++.
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G--------------~~Viv~d~~ 289 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLG--------------ARVYITEID 289 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCc--------------CEEEEEeCC
Confidence 4579999999999999999999887 899999864
No 484
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=65.16 E-value=7.1 Score=34.06 Aligned_cols=34 Identities=6% Similarity=-0.050 Sum_probs=27.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.++++|+|+|-+|-.+|..|.+.+. .+|+++.+.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~-------------~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGP-------------SELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCC-------------SEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCC-------------CEEEEEeCC
Confidence 4699999999999999999988651 389988763
No 485
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=65.16 E-value=4.6 Score=37.79 Aligned_cols=53 Identities=13% Similarity=0.099 Sum_probs=37.8
Q ss_pred CccccCC----ccccCCCCCEEEEccccccccCCCCcCCCCchHHHHHHHHHHHHHHHHHh
Q 018671 203 GRIGIDE----WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 259 (352)
Q Consensus 203 G~i~Vd~----~l~~~~~~~IfaiGD~a~~~~~~~~~~~~~~~~~A~~qg~~~a~~i~~~~ 259 (352)
|.|.+|+ +++....|++|++|.+..+....| .-.-+.|...|+.|+++++...
T Consensus 387 GGv~~~~i~~~t~~~~~i~GLy~aGEv~~v~g~~G----G~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 387 GGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTG----GYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp EEECGGGEETTTTEESSSBTEEECGGGBSCBCCTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeeecccccccccCcCCCEEEEEeeccCccCCC----cHHHHHHHHHHHHHHHHHHHhh
Confidence 4455543 455567899999999998654333 3345789999999999887654
No 486
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=64.97 E-value=6.4 Score=36.89 Aligned_cols=31 Identities=13% Similarity=0.197 Sum_probs=27.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+|.|||.|..|.-+|..|++ + .+|++++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G--------------~~V~~~D~~ 67 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-N--------------HEVVALDIV 67 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-T--------------SEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHc-C--------------CeEEEEecC
Confidence 489999999999999999987 6 799999864
No 487
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=64.90 E-value=23 Score=31.35 Aligned_cols=80 Identities=15% Similarity=0.174 Sum_probs=49.7
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCEEEeCceEEE
Q 018671 84 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 162 (352)
Q Consensus 84 ~~vvVvGg-G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 162 (352)
++|+|.|| |.+|-.++..|.+.+ .+|+++.+..-. .+.-.+ ..+.+...+++++...+.+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g--------------~~V~~l~R~~~~---~~~~~~-~~~~l~~~~v~~~~~Dl~d- 71 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH--------------RPTYILARPGPR---SPSKAK-IFKALEDKGAIIVYGLINE- 71 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT--------------CCEEEEECSSCC---CHHHHH-HHHHHHHTTCEEEECCTTC-
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC--------------CCEEEEECCCCC---ChhHHH-HHHHHHhCCcEEEEeecCC-
Confidence 48999997 999999999998765 788888875311 222222 2344666788877553221
Q ss_pred ECCeEE--EcCCcEEecceEEEecCC
Q 018671 163 DSQKLI--LNDGTEVPYGLLVWSTGV 186 (352)
Q Consensus 163 ~~~~v~--~~~g~~i~~D~vi~a~G~ 186 (352)
.+.+. ++ ...+|.||.++|.
T Consensus 72 -~~~l~~~~~---~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 72 -QEAMEKILK---EHEIDIVVSTVGG 93 (346)
T ss_dssp -HHHHHHHHH---HTTCCEEEECCCG
T ss_pred -HHHHHHHHh---hCCCCEEEECCch
Confidence 00000 01 0147888888876
No 488
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=64.82 E-value=6.1 Score=34.74 Aligned_cols=34 Identities=26% Similarity=0.127 Sum_probs=28.5
Q ss_pred cCCcEEEECCCh-HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGP-TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~-~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++++|||+|. .|.-+|..|...+ ..|+++++.
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~g--------------AtVtv~hs~ 192 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAG--------------CTTTVTHRF 192 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTT--------------CEEEEECSS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCC--------------CeEEEEeCC
Confidence 347999999996 6999999998766 899999753
No 489
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=64.69 E-value=28 Score=29.23 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=35.0
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCE
Q 018671 83 LLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVR 153 (352)
Q Consensus 83 ~~~vvVvGg-G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~ 153 (352)
.++++|.|| |..|.++|..|++.+ .+|+++.+. ++-.+.+.+.+++.+-+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G--------------~~V~~~~r~-------~~~~~~~~~~~~~~~~~ 59 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREG--------------AAVVVADIN-------AEAAEAVAKQIVADGGT 59 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESC-------HHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--------------CEEEEEcCC-------HHHHHHHHHHHHhcCCc
Confidence 357888875 788999999999876 889998763 23334455556655543
No 490
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=64.60 E-value=5.8 Score=37.78 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=28.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++|.|||+|..|..+|..++..+ .+|++++..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG--------------~~V~l~D~~ 37 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG--------------HQVLLYDIS 37 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC--------------CeEEEEECC
Confidence 48999999999999999999876 789999864
No 491
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=64.54 E-value=7.1 Score=34.77 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc--EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~--~V~lv~~~ 129 (352)
++|.|||.|..|..+|..|.+.+ . +|+++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G--------------~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSG--------------FKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTT--------------CCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC--------------CCCEEEEEECC
Confidence 48999999999999999998876 4 88888763
No 492
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=64.47 E-value=21 Score=30.33 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=34.5
Q ss_pred CcEEEEC-CChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCCCE
Q 018671 84 LHCVVVG-GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVR 153 (352)
Q Consensus 84 ~~vvVvG-gG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~ 153 (352)
++++|.| +|..|.++|..|++.+ .+|.++.+. ++-.+.+.+.+.+.+.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G--------------~~V~~~~r~-------~~~~~~~~~~~~~~~~~ 79 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLG--------------ARVVLTARD-------VEKLRAVEREIVAAGGE 79 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT--------------CEEEEEESC-------HHHHHHHHHHHHHTTCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCC--------------CEEEEEECC-------HHHHHHHHHHHHHhCCc
Confidence 5777777 4789999999999876 889888763 23334455556665544
No 493
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=64.42 E-value=6.7 Score=34.32 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=26.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 128 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~ 128 (352)
.+|.|||.|..|..+|..|.+.+ .+|+++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~~ 35 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEG--------------VTVYAFDL 35 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTT--------------CEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCC--------------CeEEEEeC
Confidence 48999999999999999998765 78888875
No 494
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=64.41 E-value=7.3 Score=34.03 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=28.4
Q ss_pred cCCcEEEECCC-hHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGG-PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG-~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++++|||.| ..|.-+|..|...+ ..|+++++.
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~g--------------AtVtv~~~~ 183 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRN--------------YTVSVCHSK 183 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTT--------------CEEEEECTT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCC--------------CeEEEEeCC
Confidence 34799999976 58999999998876 899999763
No 495
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=64.27 E-value=7.8 Score=34.77 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=27.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCcc-EEEEEeCC
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 129 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~ 129 (352)
.+|+|||+|..|..+|..|+... . +|+|++..
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~--------------~~~v~L~Di~ 40 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKE--------------LGDVVLFDIA 40 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEeCC
Confidence 48999999999999999888754 4 89999875
No 496
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=64.08 E-value=8.5 Score=33.60 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=29.0
Q ss_pred cCCcEEEEC-CChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVG-GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvG-gG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
++++++|+| +|.+|..+|..|++.+ .+|+++.+.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G--------------~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEG--------------AEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc--------------CEEEEEECC
Confidence 357899999 8999999999999876 788888764
No 497
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=64.08 E-value=7.2 Score=34.19 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=45.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHHHhCC-CEEEeCceEE
Q 018671 83 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSG-VRLVRGIVKD 161 (352)
Q Consensus 83 ~~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~g-V~v~~~~V~~ 161 (352)
.++++|+|+|-+|-.++..|.+.+. .+|+++.+. ++-.+.+.+.+...+ +...
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~-------------~~v~v~~R~-------~~~a~~la~~~~~~~~~~~~------ 179 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQP-------------ASITVTNRT-------FAKAEQLAELVAAYGEVKAQ------ 179 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCC-------------SEEEEEESS-------HHHHHHHHHHHGGGSCEEEE------
T ss_pred CCEEEEECchHHHHHHHHHHHhcCC-------------CeEEEEECC-------HHHHHHHHHHhhccCCeeEe------
Confidence 4699999999999999999987651 389999863 222333444444332 2221
Q ss_pred EECCeEEEcCCcEEecceEEEecCCCc
Q 018671 162 VDSQKLILNDGTEVPYGLLVWSTGVGP 188 (352)
Q Consensus 162 v~~~~v~~~~g~~i~~D~vi~a~G~~~ 188 (352)
.-+.+. -.+|.||-||+...
T Consensus 180 -~~~~l~------~~aDiIInaTp~gm 199 (281)
T 3o8q_A 180 -AFEQLK------QSYDVIINSTSASL 199 (281)
T ss_dssp -EGGGCC------SCEEEEEECSCCCC
T ss_pred -eHHHhc------CCCCEEEEcCcCCC
Confidence 111110 24899999997654
No 498
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=64.01 E-value=7.6 Score=35.87 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=27.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEe
Q 018671 84 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 127 (352)
Q Consensus 84 ~~vvVvGgG~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~ 127 (352)
++|.|+|||..|..++.++.+++ .+|.+++
T Consensus 25 ~~I~ilGgG~lg~~l~~aa~~lG--------------~~v~~~d 54 (403)
T 3k5i_A 25 RKVGVLGGGQLGRMLVESANRLN--------------IQVNVLD 54 (403)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEE
Confidence 59999999999999999999987 7777777
No 499
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=64.00 E-value=8.6 Score=32.53 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=28.2
Q ss_pred CCcEEEECC-----------------ChHHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 83 LLHCVVVGG-----------------GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 83 ~~~vvVvGg-----------------G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
+++|+|-|| |-.|..+|.+++..+ .+|+++...
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G--------------a~V~l~~~~ 57 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG--------------ANVTLVSGP 57 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT--------------CEEEEEECS
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 468888887 689999999999987 899999765
No 500
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=63.89 E-value=7.4 Score=34.17 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=28.5
Q ss_pred cCCcEEEECCCh-HHHHHHHHHHHhHhhHHHhhcCCCCCccEEEEEeCC
Q 018671 82 RLLHCVVVGGGP-TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 129 (352)
Q Consensus 82 ~~~~vvVvGgG~-~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 129 (352)
.+++++|||.|. .|.-+|..|...+ ..|+++++.
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~g--------------AtVtv~h~~ 193 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAG--------------ATVSVCHIK 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--------------CEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--------------CeEEEEeCC
Confidence 457999999665 7999999998876 899999863
Done!