Query 018672
Match_columns 352
No_of_seqs 214 out of 1458
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 03:03:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018672.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018672hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 1.2E-59 2.7E-64 416.5 22.6 275 62-347 1-300 (379)
2 PLN03145 Protein phosphatase 2 100.0 1.1E-51 2.5E-56 395.7 30.4 257 89-348 64-340 (365)
3 KOG0698 Serine/threonine prote 100.0 9.7E-50 2.1E-54 380.1 29.3 253 91-344 41-310 (330)
4 PTZ00224 protein phosphatase 2 100.0 1E-46 2.2E-51 362.7 31.2 242 86-341 18-274 (381)
5 PF00481 PP2C: Protein phospha 100.0 2.8E-48 6E-53 358.2 15.9 238 91-330 1-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 1.1E-44 2.3E-49 334.9 22.2 241 88-341 6-255 (262)
7 KOG0699 Serine/threonine prote 100.0 1.1E-44 2.5E-49 331.4 20.4 160 182-343 330-508 (542)
8 cd00143 PP2Cc Serine/threonine 100.0 4.8E-39 1E-43 294.6 28.1 242 91-337 2-254 (254)
9 smart00332 PP2Cc Serine/threon 100.0 1.2E-38 2.7E-43 292.7 28.1 242 88-335 4-255 (255)
10 PRK14559 putative protein seri 100.0 5.9E-38 1.3E-42 317.7 25.6 245 89-344 374-641 (645)
11 KOG0700 Protein phosphatase 2C 100.0 1.2E-37 2.6E-42 291.9 18.3 224 101-326 82-379 (390)
12 KOG1323 Serine/threonine phosp 100.0 2.6E-27 5.7E-32 215.5 20.0 222 117-340 141-489 (493)
13 KOG0618 Serine/threonine phosp 99.9 1.7E-25 3.6E-30 227.1 14.9 247 88-341 520-775 (1081)
14 KOG1379 Serine/threonine prote 99.9 1.1E-21 2.3E-26 179.0 21.1 196 101-336 88-329 (330)
15 PF13672 PP2C_2: Protein phosp 99.8 9.3E-19 2E-23 156.8 13.1 178 95-306 3-193 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 1.8E-16 3.9E-21 139.8 20.9 183 91-322 5-192 (193)
17 TIGR02865 spore_II_E stage II 99.6 1.2E-14 2.7E-19 152.3 20.4 200 89-337 551-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 5.1E-12 1.1E-16 111.1 19.7 174 120-338 4-193 (193)
19 COG2208 RsbU Serine phosphatas 98.3 0.00016 3.5E-09 70.3 21.4 186 103-338 161-366 (367)
20 PF06972 DUF1296: Protein of u 45.0 27 0.00058 24.5 2.8 25 295-319 19-44 (60)
21 COG3700 AphA Acid phosphatase 42.4 47 0.001 29.0 4.5 45 281-325 71-130 (237)
22 PF09436 DUF2016: Domain of un 37.2 19 0.00042 26.3 1.2 23 277-299 23-45 (72)
23 PRK10693 response regulator of 30.6 4.5E+02 0.0097 24.5 10.6 102 102-214 148-259 (303)
24 COG2168 DsrH Uncharacterized c 27.3 47 0.001 25.7 1.9 52 277-332 22-73 (96)
25 cd08325 CARD_CASP1-like Caspas 24.2 1.6E+02 0.0035 21.9 4.4 34 293-326 29-62 (83)
26 PF14014 DUF4230: Protein of u 20.4 3.2E+02 0.0069 22.5 6.0 41 266-306 74-114 (157)
27 cd08787 CARD_NOD2_1_CARD15 Cas 20.0 1.3E+02 0.0029 22.5 3.0 34 292-325 31-64 (87)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-59 Score=416.52 Aligned_cols=275 Identities=35% Similarity=0.532 Sum_probs=245.0
Q ss_pred CCcccccCC-cccCCCCcccCCcccCCCceEEEEeccccCCCCCceeEEEeecCC-CCceeEEEEEEcCCCchHHHHHHH
Q 018672 62 RGPIVDVLP-EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNV-DGQAVCMFGVFDGHGGSRAAEYLK 139 (352)
Q Consensus 62 ~~~~~~~~~-~~~~~~~~~~g~~~s~~~~~~~g~~s~~G~r~~neD~~~~~~~~~-~~~~~~lf~V~DG~GG~~aa~~as 139 (352)
||.+|++|+ +|....+ +.|.++||.+|++|||..|||++.+....+ .-.+|.||+|||||.|++.|.+|+
T Consensus 1 MGaFLdKPkteKhn~~G--------~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~ 72 (379)
T KOG0697|consen 1 MGAFLDKPKTEKHNAEG--------EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCA 72 (379)
T ss_pred CCccccCcccccccccC--------cCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHH
Confidence 678999988 4554444 447999999999999999999998876554 345899999999999999999999
Q ss_pred HHHHHHHHcCCCCc--------chHHHHHHHHHHHHHHHHHHhc--cccccCCCCeEEEEEEeCCeEEEEEeCCceEEEE
Q 018672 140 EHLFENLLKHPQFM--------TDTKLAISETYQQTDVDFLESE--RDTYRDDGSTASTAILVGNHLYVANVGDSRTVIS 209 (352)
Q Consensus 140 ~~l~~~l~~~~~~~--------~~~~~~l~~af~~~~~~i~~~~--~~~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~ 209 (352)
++|++.|.....|. ++.+..|+..|+++++...... .....++||||+.+++...++|++|+||||++++
T Consensus 73 ~hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~ 152 (379)
T KOG0697|consen 73 EHLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLC 152 (379)
T ss_pred HHHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhhee
Confidence 99999988765544 3678899999999998765422 2222349999999999999999999999999999
Q ss_pred eCCceeecCCCCCCCChhHHHHHHHcCCeEEecCccccCCccccccccCCcccc---------cccccCCceeEEEeeCC
Q 018672 210 KAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEG 280 (352)
Q Consensus 210 r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vsralGd~~~k---------~~v~~~P~i~~~~l~~~ 280 (352)
|+|+++.-|.||+|.+|.|++||+++||.|+ ..|+||.|+++|||||+.|| |.|+++|++........
T Consensus 153 rng~~~f~TqDHKP~~p~EkeRIqnAGGSVM---IqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~ee 229 (379)
T KOG0697|consen 153 RNGEVVFSTQDHKPYLPKEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEE 229 (379)
T ss_pred cCCceEEeccCCCCCChHHHHHHhcCCCeEE---EEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeecccc
Confidence 9999999999999999999999999999999 78999999999999999998 56999999999999988
Q ss_pred CeEEEEEcCCCCCCCChHHHHHHHHc----CCCHHHHHHHHHHHHHHcCCCCceEEEEEEccCCCCCCCCC
Q 018672 281 FELLVLASDGLWDVVPNEDAVALART----GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDPAEP 347 (352)
Q Consensus 281 d~~lILaSDGlwd~l~~~ei~~i~~~----~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~~~~~ 347 (352)
|+|+||||||+||+|+++|++++++. ..|+.++|+.+++.|+.+|++||||+|+|.|.+.|+..+.+
T Consensus 230 deFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~~ea 300 (379)
T KOG0697|consen 230 DEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVSIEA 300 (379)
T ss_pred CcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCCHHH
Confidence 89999999999999999999999987 36899999999999999999999999999999998887654
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.1e-51 Score=395.73 Aligned_cols=257 Identities=35% Similarity=0.578 Sum_probs=222.8
Q ss_pred ceEEEEeccccCCCCCceeEEEeecCC--------CCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcchHHHHH
Q 018672 89 KLRCGYSSFRGKRATMEDFYDIKTSNV--------DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAI 160 (352)
Q Consensus 89 ~~~~g~~s~~G~r~~neD~~~~~~~~~--------~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~~~~~~~l 160 (352)
.++++..|++|.|..|||++++..... +..+..||+|||||||+.++++|++++++.|.+...+..++.++|
T Consensus 64 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al 143 (365)
T PLN03145 64 VVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVV 143 (365)
T ss_pred ceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHH
Confidence 578999999999999999987643211 122467999999999999999999999999988766666788899
Q ss_pred HHHHHHHHHHHHHhcc-ccccCCCCeEEEEEEeCCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcCCeE
Q 018672 161 SETYQQTDVDFLESER-DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV 239 (352)
Q Consensus 161 ~~af~~~~~~i~~~~~-~~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v 239 (352)
+++|.++++.+.+... .....+|||++++++.++++|+|||||||+|++++|++++||.||+|.++.|++||.+.||.+
T Consensus 144 ~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v 223 (365)
T PLN03145 144 SSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYV 223 (365)
T ss_pred HHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCce
Confidence 9999999999876432 223349999999999999999999999999999999999999999999999999999999998
Q ss_pred EecCccccCCccccccccCCccccc-------ccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHH----cCC
Q 018672 240 MWAGTWRVGGVLAMSRAFGNRMLKQ-------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR----TGE 308 (352)
Q Consensus 240 ~~~~~~r~~g~l~vsralGd~~~k~-------~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~----~~~ 308 (352)
. ..++++.+++||+|||..+|. .++++|++..+++.++|+|||||||||||+|++++++++++ ...
T Consensus 224 ~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~ 300 (365)
T PLN03145 224 Y---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHN 300 (365)
T ss_pred e---cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCC
Confidence 6 458889999999999987763 37899999999999888999999999999999999877664 346
Q ss_pred CHHHHHHHHHHHHHHcCCCCceEEEEEEccCCCCCCCCCC
Q 018672 309 EPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDPAEPE 348 (352)
Q Consensus 309 ~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~~~~~~ 348 (352)
+|+++|+.|++.|+.+++.||+|||||+|+..+++....+
T Consensus 301 ~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~ 340 (365)
T PLN03145 301 DPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAP 340 (365)
T ss_pred CHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCcccccc
Confidence 8999999999999999999999999999998655544443
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-50 Score=380.07 Aligned_cols=253 Identities=50% Similarity=0.762 Sum_probs=224.8
Q ss_pred EEEEeccccCCCCCceeEEEeecCC----CCc-eeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcc---hHHHHHHH
Q 018672 91 RCGYSSFRGKRATMEDFYDIKTSNV----DGQ-AVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT---DTKLAISE 162 (352)
Q Consensus 91 ~~g~~s~~G~r~~neD~~~~~~~~~----~~~-~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~~---~~~~~l~~ 162 (352)
..+.++.+|+|..|||.+....... .+. ...+|||||||||+.+|+++.++|+..+.++..+.. +.+.++++
T Consensus 41 ~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~ 120 (330)
T KOG0698|consen 41 LGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRR 120 (330)
T ss_pred ceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHH
Confidence 3555588899999999988765522 333 589999999999999999999999999998877665 47899999
Q ss_pred HHH-HHHHHHHHhccccccCCCCeEEEEEEeCC-eEEEEEeCCceEEEEeCC-ceeecCCCCCCCChhHHHHHHHcCCeE
Q 018672 163 TYQ-QTDVDFLESERDTYRDDGSTASTAILVGN-HLYVANVGDSRTVISKAG-KAIPLSEDHKPNRCDERKRIENAGGVV 239 (352)
Q Consensus 163 af~-~~~~~i~~~~~~~~~~~GsT~~~~~i~~~-~l~~anvGDSra~l~r~g-~~~~LT~dH~~~~~~E~~ri~~~gg~v 239 (352)
+|. +++..++.. ......+|||++++++..+ ++|+||+|||||+|++.| ++++||.||+|..++|++||+++||.|
T Consensus 121 ~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v 199 (330)
T KOG0698|consen 121 AFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRV 199 (330)
T ss_pred HHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEE
Confidence 999 699998876 2223458999998888855 999999999999999865 899999999999999999999999999
Q ss_pred Ee-cCccccCCccccccccCCcccc-cccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHc----CCCHHHH
Q 018672 240 MW-AGTWRVGGVLAMSRAFGNRMLK-QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART----GEEPEIA 313 (352)
Q Consensus 240 ~~-~~~~r~~g~l~vsralGd~~~k-~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~----~~~~~~~ 313 (352)
.+ .+.+|++|.|+++|+|||..+| ++++++|+++...+++.|+|||||||||||+++++|++++++. ..++..+
T Consensus 200 ~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a 279 (330)
T KOG0698|consen 200 SNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAA 279 (330)
T ss_pred EEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHH
Confidence 85 4468999999999999999999 8999999999999999889999999999999999999999998 5689999
Q ss_pred HHHHHHHHHHcCCCCceEEEEEEccCCCCCC
Q 018672 314 ARKLTETAFTRGSADNITCIVVRFHHVNEDP 344 (352)
Q Consensus 314 a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~~ 344 (352)
+..|.+.|+.+++.||||||||.|.+.+...
T Consensus 280 ~~~l~~~a~~~~s~DnitvvvV~l~~~~~~~ 310 (330)
T KOG0698|consen 280 AKLLATEALSRGSKDNITVVVVRLKSSPKSP 310 (330)
T ss_pred HHHHHHHHhhcCCCCCeEEEEEEecCccccc
Confidence 9999999999999999999999999876433
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1e-46 Score=362.72 Aligned_cols=242 Identities=36% Similarity=0.618 Sum_probs=209.9
Q ss_pred CCCceEEEEeccccCCCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHH
Q 018672 86 EDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQ 165 (352)
Q Consensus 86 ~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~~~~~~~l~~af~ 165 (352)
.+..+.+|+.+++|+|..|||++.+... .+..+|+|||||||..+|+++++.|.+.+.+.... ...+.|+++|.
T Consensus 18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~----~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~--~~~~~l~~a~~ 91 (381)
T PTZ00224 18 GNSIFRCASACVNGYRESMEDAHLLYLT----DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP--MTDERMEELCL 91 (381)
T ss_pred CCccEEEEEEeCCCCCCCCCCeeEeccC----CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc--ccHHHHHHHHH
Confidence 3568999999999999999999876432 24469999999999999999999999877654322 23456899999
Q ss_pred HHHHHHHHhccccccCCCCeEEEEEEe-CCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcCCeEEecCc
Q 018672 166 QTDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGT 244 (352)
Q Consensus 166 ~~~~~i~~~~~~~~~~~GsT~~~~~i~-~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~~ 244 (352)
.+|++|.+... .+|||++++++. +.++|++||||||+|++|+|++++||.||++.++.|+.||.++||.+. .
T Consensus 92 ~~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~---~ 164 (381)
T PTZ00224 92 EIDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVV---S 164 (381)
T ss_pred HHHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEec---c
Confidence 99999875432 369999998886 579999999999999999999999999999999999999999999886 4
Q ss_pred cccCCccccccccCCcccc---------cccccCCceeEEEeeCCCeEEEEEcCCCCC-CCChHHHHHHHHc----CCCH
Q 018672 245 WRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWD-VVPNEDAVALART----GEEP 310 (352)
Q Consensus 245 ~r~~g~l~vsralGd~~~k---------~~v~~~P~i~~~~l~~~d~~lILaSDGlwd-~l~~~ei~~i~~~----~~~~ 310 (352)
+|++|.+++||+||+..+| +.++++|++..+.+.++ |||||||||||| +++++++.+++.. ..++
T Consensus 165 ~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~-D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~ 243 (381)
T PTZ00224 165 NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSN-DFIILACDGVFEGNFSNEEVVAFVKEQLETCDDL 243 (381)
T ss_pred ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCC-CEEEEECCCcCcCccCHHHHHHHHHHHHhcCCCH
Confidence 6899999999999997654 34678999999999876 899999999999 8999999999863 4689
Q ss_pred HHHHHHHHHHHHHcCCCCceEEEEEEccCCC
Q 018672 311 EIAARKLTETAFTRGSADNITCIVVRFHHVN 341 (352)
Q Consensus 311 ~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~ 341 (352)
+++|+.|++.|+.+|+.||+|||||+|...+
T Consensus 244 ~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 244 AVVAGRVCDEAIRRGSKDNISCLIVQLKDGA 274 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEEEeeCCC
Confidence 9999999999999999999999999999764
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=2.8e-48 Score=358.23 Aligned_cols=238 Identities=47% Similarity=0.686 Sum_probs=202.5
Q ss_pred EEEEeccccCCCCCceeEEEeecCC---CCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCc--chHHHHHHHHHH
Q 018672 91 RCGYSSFRGKRATMEDFYDIKTSNV---DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFM--TDTKLAISETYQ 165 (352)
Q Consensus 91 ~~g~~s~~G~r~~neD~~~~~~~~~---~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~--~~~~~~l~~af~ 165 (352)
.+|+.+.+|+|..|||.+.+..... ......+|+|||||||..+++++++.+.+.+.+...+. .++.++|..+|.
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 4789999999999999999876543 34578999999999999999999999998776544322 268899999999
Q ss_pred H-HHHHHHHhccc-cccCCCCeEEEEEEeCCeEEEEEeCCceEEEEeCCcee-ecCCCCCCCChhHHHHHHHcCCeEEec
Q 018672 166 Q-TDVDFLESERD-TYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAI-PLSEDHKPNRCDERKRIENAGGVVMWA 242 (352)
Q Consensus 166 ~-~~~~i~~~~~~-~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~r~g~~~-~LT~dH~~~~~~E~~ri~~~gg~v~~~ 242 (352)
. ++..+...... ....+|||+++++|.++++|+|||||||+||++.+... +||.||+|.++.|+.||+++||.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 9 88887763221 45569999999999999999999999999999999888 99999999999999999999999987
Q ss_pred CccccCCccccccccCCccccc----ccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHcCCC----HHHHH
Q 018672 243 GTWRVGGVLAMSRAFGNRMLKQ----FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEE----PEIAA 314 (352)
Q Consensus 243 ~~~r~~g~l~vsralGd~~~k~----~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~~~~----~~~~a 314 (352)
.+|++|.+++||+|||..+|+ +++++|++..+.+.++|+|||||||||||+++++|+++++++..+ |+.+|
T Consensus 160 -~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a 238 (254)
T PF00481_consen 160 -NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAA 238 (254)
T ss_dssp -TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred -chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHH
Confidence 789999999999999999998 899999999999999878999999999999999999999987644 99999
Q ss_pred HHHHHHHHHcCCCCce
Q 018672 315 RKLTETAFTRGSADNI 330 (352)
Q Consensus 315 ~~L~~~A~~~g~~DNi 330 (352)
+.|++.|+++|+.|||
T Consensus 239 ~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 239 EKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHhcCCCCCC
Confidence 9999999999999997
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=334.87 Aligned_cols=241 Identities=33% Similarity=0.471 Sum_probs=208.7
Q ss_pred CceEEEEeccccC-CCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCC-----Ccch-HHHHH
Q 018672 88 GKLRCGYSSFRGK-RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQ-----FMTD-TKLAI 160 (352)
Q Consensus 88 ~~~~~g~~s~~G~-r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~-----~~~~-~~~~l 160 (352)
..+.+...+..|. |.+|||++++.....+.. ..||+|||||||+.++++|++.+++.|.+... ...+ ..+.|
T Consensus 6 ~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l 84 (262)
T COG0631 6 LSLKVAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELL 84 (262)
T ss_pred ceeeeeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHH
Confidence 4667777788887 889999999986444443 67999999999999999999999998876421 1111 67899
Q ss_pred HHHHHHHHHHHHHhcc--ccccCCCCeEEEEEEeCCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcCCe
Q 018672 161 SETYQQTDVDFLESER--DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGV 238 (352)
Q Consensus 161 ~~af~~~~~~i~~~~~--~~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~ 238 (352)
.+++..++..|..... .....||||++++++.++++|+|||||||+|++|+|++++||.||++.+..++.++...++.
T Consensus 85 ~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~~ 164 (262)
T COG0631 85 KEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEEA 164 (262)
T ss_pred HHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHHH
Confidence 9999999999887543 45567999999999999999999999999999999999999999999999999998776665
Q ss_pred EEecCccccCCccccccccCCcccccccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHcCCCHHHHHHHHH
Q 018672 239 VMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLT 318 (352)
Q Consensus 239 v~~~~~~r~~g~l~vsralGd~~~k~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~~~~~~~~a~~L~ 318 (352)
..+ +|. .++||+||+.. .++|+++...+.++ +|+|||||||||.+++++++++++...+|+++++.|+
T Consensus 165 ~~~---~~~---~~ltralG~~~-----~~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li 232 (262)
T COG0631 165 RSH---PRR---NALTRALGDFD-----LLEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLI 232 (262)
T ss_pred HhC---ccc---hhhhhhcCCCc-----ccceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHH
Confidence 543 222 38999999985 38999999999998 9999999999999999999999998889999999999
Q ss_pred HHHHHcCCCCceEEEEEEccCCC
Q 018672 319 ETAFTRGSADNITCIVVRFHHVN 341 (352)
Q Consensus 319 ~~A~~~g~~DNiTvIvv~l~~~~ 341 (352)
+.|+++++.||+|+|+|++...+
T Consensus 233 ~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 233 ELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHHhcCCCCceEEEEEEeeccc
Confidence 99999999999999999998765
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=331.42 Aligned_cols=160 Identities=36% Similarity=0.606 Sum_probs=147.9
Q ss_pred CCCeEEEEEEeCCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcCCeEEecCccccCCccccccccCCcc
Q 018672 182 DGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRM 261 (352)
Q Consensus 182 ~GsT~~~~~i~~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vsralGd~~ 261 (352)
+|||++++++.+++||+||.||||++++|+|+++-|+.||+|..+.|..||.++||.|... .|+||.|+++|||||+.
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlD--GRVNGGLNLSRA~GDHa 407 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLD--GRVNGGLNLSRAFGDHA 407 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeec--ceecCccchhhhhhhhh
Confidence 8999999999999999999999999999999999999999999999999999999999885 59999999999999999
Q ss_pred cc---------cccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHc----CCCHHHHHHHHHHHHHHcC---
Q 018672 262 LK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART----GEEPEIAARKLTETAFTRG--- 325 (352)
Q Consensus 262 ~k---------~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~----~~~~~~~a~~L~~~A~~~g--- 325 (352)
|| +.+++-|+|....|++.++|+|+||||||++|+.++++++++. ......+++.|.+.|++..
T Consensus 408 YK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~G 487 (542)
T KOG0699|consen 408 YKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDG 487 (542)
T ss_pred hhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCC
Confidence 98 4588999999999999999999999999999999999999875 3567899999999999853
Q ss_pred ---CCCceEEEEEEccCCCCC
Q 018672 326 ---SADNITCIVVRFHHVNED 343 (352)
Q Consensus 326 ---~~DNiTvIvv~l~~~~~~ 343 (352)
+.||||||++.|.....+
T Consensus 488 DGTGCDNMT~ii~~Fkrk~~e 508 (542)
T KOG0699|consen 488 DGTGCDNMTVIITTFKRKSKE 508 (542)
T ss_pred CCcCCCcceEEEEEeccchhh
Confidence 479999999999964433
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.8e-39 Score=294.63 Aligned_cols=242 Identities=43% Similarity=0.672 Sum_probs=210.7
Q ss_pred EEEEeccccCCCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCC-----cchHHHHHHHHHH
Q 018672 91 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQF-----MTDTKLAISETYQ 165 (352)
Q Consensus 91 ~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~-----~~~~~~~l~~af~ 165 (352)
.+++.+..|.|..|||++.+...... .+..+|+|||||||+..++++++.+.+.+.+.... ...+...|+++|.
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 80 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFL 80 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 56788889999999999998643211 25679999999999999999999999988765432 3456778999999
Q ss_pred HHHHHHHHhcc--ccccCCCCeEEEEEEeCCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcCCeEEecC
Q 018672 166 QTDVDFLESER--DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAG 243 (352)
Q Consensus 166 ~~~~~i~~~~~--~~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~ 243 (352)
.+++.+..... .....+|||++++++.+++++++|+||||+|++++++++++|.||++.++.|+.|+...++.+.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~--- 157 (254)
T cd00143 81 RADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS--- 157 (254)
T ss_pred HHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE---
Confidence 99999876543 2345689999999999999999999999999999999999999999999999999999998654
Q ss_pred ccccCCccccccccCCcccccccccCCceeEEEe-eCCCeEEEEEcCCCCCCCChHHHHHHHHcCC---CHHHHHHHHHH
Q 018672 244 TWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEV-DEGFELLVLASDGLWDVVPNEDAVALARTGE---EPEIAARKLTE 319 (352)
Q Consensus 244 ~~r~~g~l~vsralGd~~~k~~v~~~P~i~~~~l-~~~d~~lILaSDGlwd~l~~~ei~~i~~~~~---~~~~~a~~L~~ 319 (352)
..+.++...+||+||+..+|+.+.++|++..+.+ .++ ++||||||||||+++.+++.+++.... +++++|+.|++
T Consensus 158 ~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~-d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~ 236 (254)
T cd00143 158 NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDD-DFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVD 236 (254)
T ss_pred eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCC-cEEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHH
Confidence 3455667899999999998888899999999999 554 999999999999999999999998876 89999999999
Q ss_pred HHHHcCCCCceEEEEEEc
Q 018672 320 TAFTRGSADNITCIVVRF 337 (352)
Q Consensus 320 ~A~~~g~~DNiTvIvv~l 337 (352)
.|..+++.||+|+|++.|
T Consensus 237 ~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 237 LALRRGSHDNITVVVVRL 254 (254)
T ss_pred HHHhCCCCCCEEEEEEeC
Confidence 999999999999999975
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.2e-38 Score=292.72 Aligned_cols=242 Identities=48% Similarity=0.736 Sum_probs=211.6
Q ss_pred CceEEEEeccccCCCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCc----chHHHHHHHH
Q 018672 88 GKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFM----TDTKLAISET 163 (352)
Q Consensus 88 ~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~----~~~~~~l~~a 163 (352)
..+.+++.+.+|.|..|||++.+.... .....+|+|||||||..+++++++.+.+.+.+..... ..+.+.|+++
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~--~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDL--SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKA 81 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccC--CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHH
Confidence 357788888889999999999886532 1356799999999999999999999999887654332 3578889999
Q ss_pred HHHHHHHHHHhccc--cccCCCCeEEEEEEeCCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcCCeEEe
Q 018672 164 YQQTDVDFLESERD--TYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW 241 (352)
Q Consensus 164 f~~~~~~i~~~~~~--~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~ 241 (352)
+..++..+...... ....+|||++++++..+++|++|+||||+|+++++++.+||.||++.++.|..||...++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~- 160 (255)
T smart00332 82 FLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVI- 160 (255)
T ss_pred HHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEE-
Confidence 99999998775433 234589999999999999999999999999999999999999999999999999999998765
Q ss_pred cCccccCCccccccccCCcccccccccCCceeEEEe-eCCCeEEEEEcCCCCCCCChHHHHHHHHcCC---CHHHHHHHH
Q 018672 242 AGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEV-DEGFELLVLASDGLWDVVPNEDAVALARTGE---EPEIAARKL 317 (352)
Q Consensus 242 ~~~~r~~g~l~vsralGd~~~k~~v~~~P~i~~~~l-~~~d~~lILaSDGlwd~l~~~ei~~i~~~~~---~~~~~a~~L 317 (352)
.++.++...+||++|+..+|+.+.++|++...++ .++ ++||||||||||+++++++.+++.... ++.++|+.|
T Consensus 161 --~~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~-d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l 237 (255)
T smart00332 161 --NGRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKD-DFLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRL 237 (255)
T ss_pred --CCeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCC-cEEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHH
Confidence 3366777899999999999999999999999997 554 999999999999999999999998764 699999999
Q ss_pred HHHHHHcCCCCceEEEEE
Q 018672 318 TETAFTRGSADNITCIVV 335 (352)
Q Consensus 318 ~~~A~~~g~~DNiTvIvv 335 (352)
++.|..++..||+|+|||
T Consensus 238 ~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 238 IDLALARGSKDNITVIVV 255 (255)
T ss_pred HHHHHHcCCCCCeEEEEC
Confidence 999999999999999985
No 10
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=5.9e-38 Score=317.72 Aligned_cols=245 Identities=27% Similarity=0.327 Sum_probs=186.0
Q ss_pred ceEEEEeccccC-CCCCceeEEEeecC-----CCC---ceeEEEEEEcCCCchHHHHHHHHHHHHHHHc----CCCCcch
Q 018672 89 KLRCGYSSFRGK-RATMEDFYDIKTSN-----VDG---QAVCMFGVFDGHGGSRAAEYLKEHLFENLLK----HPQFMTD 155 (352)
Q Consensus 89 ~~~~g~~s~~G~-r~~neD~~~~~~~~-----~~~---~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~----~~~~~~~ 155 (352)
.+.++..+++|. |..|||++.+.... ..+ ....+|+|||||||+.+++.||+.+++.|.+ .......
T Consensus 374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~ 453 (645)
T PRK14559 374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELP 453 (645)
T ss_pred eEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccccc
Confidence 578899999998 99999998764321 111 1356999999999999888887777666543 2111112
Q ss_pred HHHHHHHHHHHHHHHHHHhccc----cccCCCCeEEEEEEeCCeEEEEEeCCceEEEE-eCCceeecCCCCCCCChhHHH
Q 018672 156 TKLAISETYQQTDVDFLESERD----TYRDDGSTASTAILVGNHLYVANVGDSRTVIS-KAGKAIPLSEDHKPNRCDERK 230 (352)
Q Consensus 156 ~~~~l~~af~~~~~~i~~~~~~----~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~-r~g~~~~LT~dH~~~~~~E~~ 230 (352)
..+.|+++|..+|..|.+.... ....||||++++++.++++|++||||||+|++ |+|++++||.||++.+...+.
T Consensus 454 ~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~~ 533 (645)
T PRK14559 454 DEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQR 533 (645)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHHh
Confidence 4567999999999999764321 34469999999999999999999999999988 578999999999987543322
Q ss_pred HHHHcCCeEEecCccccCCccccccccCCcccccccccCCceeEEEeeCCCeEEEEEcCCCCCC--CCh---HHHHHHHH
Q 018672 231 RIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDV--VPN---EDAVALAR 305 (352)
Q Consensus 231 ri~~~gg~v~~~~~~r~~g~l~vsralGd~~~k~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~--l~~---~ei~~i~~ 305 (352)
.+... ....| .+...+||+||+...+ ..+|++..+.+.++ ++||||||||||+ +.. +++..++.
T Consensus 534 Gi~~~------~a~~~-p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~g-D~lLLCSDGL~D~~~ve~~~~~~l~~il~ 602 (645)
T PRK14559 534 GVEPQ------IAYAR-PDAYQLTQALGPRDNS---AIQPDIQFLEIEED-TLLLLCSDGLSDNDLLETHWQTHLLPLLS 602 (645)
T ss_pred CCCHH------HHhcC-cccceeeeccCCCCCC---cccceEEEEEcCCC-CEEEEECCCCCCCcccchHHHHHHHHHHh
Confidence 21100 01122 3457899999986433 36899999999875 9999999999994 554 45567777
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCCceEEEEEEccCCCCCC
Q 018672 306 TGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDP 344 (352)
Q Consensus 306 ~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~~ 344 (352)
...++.+++++|++.|+.+|+.||+|+|||++...+..+
T Consensus 603 ~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~~~ 641 (645)
T PRK14559 603 SSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQLS 641 (645)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCCCC
Confidence 777899999999999999999999999999998765543
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=291.92 Aligned_cols=224 Identities=35% Similarity=0.563 Sum_probs=187.6
Q ss_pred CCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCC------------------------------
Q 018672 101 RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHP------------------------------ 150 (352)
Q Consensus 101 r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~------------------------------ 150 (352)
...-||.+.+.... +..+.|+||||||||..++++++++|+.++..+.
T Consensus 82 ~~~~edrv~~~~s~--~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~ 159 (390)
T KOG0700|consen 82 GKAEEDRVSVAVSE--ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQL 159 (390)
T ss_pred CCcccCcceeeeec--cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcc
Confidence 46678877766553 3467899999999999999999999999886210
Q ss_pred ----CCcchHHHHHHHHHHHHHHHHHHhc------cccccCCCCeEEEEEEeCCeEEEEEeCCceEEEEe---CC---ce
Q 018672 151 ----QFMTDTKLAISETYQQTDVDFLESE------RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISK---AG---KA 214 (352)
Q Consensus 151 ----~~~~~~~~~l~~af~~~~~~i~~~~------~~~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~r---~g---~~ 214 (352)
....++.++|.+||.+++++|+... .+.-.-+||++.++++.+..|||||+|||||+|.+ ++ .+
T Consensus 160 ~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A 239 (390)
T KOG0700|consen 160 SSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVA 239 (390)
T ss_pred cccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEE
Confidence 0135678899999999999997632 22334589999999999999999999999999965 33 57
Q ss_pred eecCCCCCCCChhHHHHHHHcCC---eEEecCccccCCccccccccCCcccc---------------------cccccCC
Q 018672 215 IPLSEDHKPNRCDERKRIENAGG---VVMWAGTWRVGGVLAMSRAFGNRMLK---------------------QFVVAEP 270 (352)
Q Consensus 215 ~~LT~dH~~~~~~E~~ri~~~gg---~v~~~~~~r~~g~l~vsralGd~~~k---------------------~~v~~~P 270 (352)
+|||.||+..+++|+.||+..+- .+.-...+|+.|.+.+||||||.+|| ||++++|
T Consensus 240 ~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP 319 (390)
T KOG0700|consen 240 VQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEP 319 (390)
T ss_pred EecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccc
Confidence 99999999999999999998874 33344458999999999999999998 7899999
Q ss_pred ceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHcC----CCHHHHHHHHHHHHHHcCC
Q 018672 271 EIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTG----EEPEIAARKLTETAFTRGS 326 (352)
Q Consensus 271 ~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~~----~~~~~~a~~L~~~A~~~g~ 326 (352)
.|+..+|.+.|.||||||||||++|+++|+++++... ..-..+|+.|++.|+.+..
T Consensus 320 ~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aa 379 (390)
T KOG0700|consen 320 SITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAA 379 (390)
T ss_pred eEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999873 2235789999999987643
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-27 Score=215.52 Aligned_cols=222 Identities=28% Similarity=0.451 Sum_probs=176.1
Q ss_pred CceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCC--------------------------------C-------c-chH
Q 018672 117 GQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQ--------------------------------F-------M-TDT 156 (352)
Q Consensus 117 ~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~--------------------------------~-------~-~~~ 156 (352)
+.+..+|-+||||.|..+|-.|++.+.+.+..+.. + . .-.
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 44678999999999999999999888765432100 0 0 013
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCCCCeEEEEEEeCCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcC
Q 018672 157 KLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAG 236 (352)
Q Consensus 157 ~~~l~~af~~~~~~i~~~~~~~~~~~GsT~~~~~i~~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~g 236 (352)
.-+|..||+..++.|..........+|||+.+++..-+++|+||.|||||+++|++++++|+.+.+|. .||+|++..+
T Consensus 221 iGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPe--tERqRlQ~La 298 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPE--TERQRLQELA 298 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcH--HHHHHHHHHh
Confidence 45899999999999987665555668999999999999999999999999999999999999999995 4888887544
Q ss_pred --------CeE-----------------------------------------Eec---CccccCCccccccccCCcccc-
Q 018672 237 --------GVV-----------------------------------------MWA---GTWRVGGVLAMSRAFGNRMLK- 263 (352)
Q Consensus 237 --------g~v-----------------------------------------~~~---~~~r~~g~l~vsralGd~~~k- 263 (352)
+.+ ... -..|+.+.+.+||.|||+.+|
T Consensus 299 f~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv 378 (493)
T KOG1323|consen 299 FRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKV 378 (493)
T ss_pred hcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeee
Confidence 111 111 134566678999999999885
Q ss_pred --------cccccCCceeEEEee----CCCeEEEEEcCCCCCCCChHHHHHHHHcC------CCH---HHHHHHHHHHHH
Q 018672 264 --------QFVVAEPEIQDLEVD----EGFELLVLASDGLWDVVPNEDAVALARTG------EEP---EIAARKLTETAF 322 (352)
Q Consensus 264 --------~~v~~~P~i~~~~l~----~~d~~lILaSDGlwd~l~~~ei~~i~~~~------~~~---~~~a~~L~~~A~ 322 (352)
|++++-|++..+.+. ..|+++|||||||||+++++++..++++. .|| ..+|+.|+..|.
T Consensus 379 ~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~ar 458 (493)
T KOG1323|consen 379 VDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAAR 458 (493)
T ss_pred ecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhc
Confidence 889999999999886 34689999999999999999999999862 344 367888888775
Q ss_pred H-------------cCCCCceEEEEEEccCC
Q 018672 323 T-------------RGSADNITCIVVRFHHV 340 (352)
Q Consensus 323 ~-------------~g~~DNiTvIvv~l~~~ 340 (352)
. .|+.|||||-||-|..-
T Consensus 459 g~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 459 GQQKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred CccCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 3 25789999999998753
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-25 Score=227.09 Aligned_cols=247 Identities=25% Similarity=0.382 Sum_probs=212.1
Q ss_pred CceEEEEeccccCCCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHH
Q 018672 88 GKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQT 167 (352)
Q Consensus 88 ~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~~~~~~~l~~af~~~ 167 (352)
.-++||++...|.|..+.-+......+..+ +...|+++||-+...........+.+++.++.....+-.+.|+.+|...
T Consensus 520 ~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~~-~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~ 598 (1081)
T KOG0618|consen 520 FLWTYGVAGVSGQRNKVCSRAVWVENFFLN-PQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRL 598 (1081)
T ss_pred eheeeccchhcccccchhhhhhhhhhcccC-CcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 356799999999987776655443333322 4579999999999999999999999999887766666666699999999
Q ss_pred HHHHHHhccccccCCCCeEEEEEEeC--------CeEEEEEeCCceEEEEeCCceeecCCCC-CCCChhHHHHHHHcCCe
Q 018672 168 DVDFLESERDTYRDDGSTASTAILVG--------NHLYVANVGDSRTVISKAGKAIPLSEDH-KPNRCDERKRIENAGGV 238 (352)
Q Consensus 168 ~~~i~~~~~~~~~~~GsT~~~~~i~~--------~~l~~anvGDSra~l~r~g~~~~LT~dH-~~~~~~E~~ri~~~gg~ 238 (352)
++++.... ...|..++.+.+.. .++++||+|+|.++++++|+-.++|+-. ....++|.+||..++|+
T Consensus 599 ~rklg~~g----~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~ 674 (1081)
T KOG0618|consen 599 NRKLGEEG----QVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGF 674 (1081)
T ss_pred hhhhhhhh----ccccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCe
Confidence 99984432 23566666677764 3689999999999999999999988776 44589999999999999
Q ss_pred EEecCccccCCccccccccCCcccccccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHcCCCHHHHHHHHH
Q 018672 239 VMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLT 318 (352)
Q Consensus 239 v~~~~~~r~~g~l~vsralGd~~~k~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~~~~~~~~a~~L~ 318 (352)
+.. .++++|+...||++|...+.|++.+.|+|....+++.|||||+++.++|++|+.+++++++++..+|-.||++|.
T Consensus 675 i~e--d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~ 752 (1081)
T KOG0618|consen 675 ITE--DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLC 752 (1081)
T ss_pred ecC--CCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHH
Confidence 875 678999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred HHHHHcCCCCceEEEEEEccCCC
Q 018672 319 ETAFTRGSADNITCIVVRFHHVN 341 (352)
Q Consensus 319 ~~A~~~g~~DNiTvIvv~l~~~~ 341 (352)
+.|.++|+.||++++||+|....
T Consensus 753 d~AqSYgc~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 753 DLAQSYGCAENVSVLVVRLNHLE 775 (1081)
T ss_pred HHHHhcccccCeeEEEEEeecch
Confidence 99999999999999999997643
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.89 E-value=1.1e-21 Score=178.97 Aligned_cols=196 Identities=21% Similarity=0.352 Sum_probs=142.1
Q ss_pred CCCCceeEEEeecCCCCceeEEEEEEcCCCchHH-----HHHHHHHHHH----HHHcCCCCcchHHHHHHHHHHHHHHHH
Q 018672 101 RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRA-----AEYLKEHLFE----NLLKHPQFMTDTKLAISETYQQTDVDF 171 (352)
Q Consensus 101 r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~a-----a~~as~~l~~----~l~~~~~~~~~~~~~l~~af~~~~~~i 171 (352)
-...||+|++... ....+.|||||+|||.- +.+.. .|.. .+.+......++...|.++|..+-.+
T Consensus 88 ~~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~-eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~- 161 (330)
T KOG1379|consen 88 GKGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSR-ELMSNCERLVQNSDFNPSDPVNLLEKAYAELKSQ- 161 (330)
T ss_pred CCCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHH-HHHHHHHHHhcccccCCCChHHHHHHHHHHHhhc-
Confidence 3578999998642 23459999999999843 33333 3333 23333334458888888888876332
Q ss_pred HHhccccccCCCCeEEEEEEe--CCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcCCeEEecCccccCC
Q 018672 172 LESERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGG 249 (352)
Q Consensus 172 ~~~~~~~~~~~GsT~~~~~i~--~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~~~r~~g 249 (352)
+...-++|||+++++. +++||+||+|||-..++|+|++++-|..+.. ..|-
T Consensus 162 -----~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H----------------------~FN~ 214 (330)
T KOG1379|consen 162 -----KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQH----------------------YFNT 214 (330)
T ss_pred -----CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchhee----------------------ccCC
Confidence 1222378899999998 7899999999999999999999988877642 2222
Q ss_pred cccccc-------ccCCcccccccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHc-----CCCHHHHHHHH
Q 018672 250 VLAMSR-------AFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART-----GEEPEIAARKL 317 (352)
Q Consensus 250 ~l~vsr-------alGd~~~k~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~-----~~~~~~~a~~L 317 (352)
.++++- +++|. .-..+.+++.+.++ |+||||||||||+|.+++|.+++.. ..+++..|++|
T Consensus 215 PyQLs~~p~~~~~~~~d~------p~~ad~~~~~v~~G-DvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~i 287 (330)
T KOG1379|consen 215 PYQLSSPPEGYSSYISDV------PDSADVTSFDVQKG-DVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKI 287 (330)
T ss_pred ceeeccCCccccccccCC------ccccceEEEeccCC-CEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHH
Confidence 223322 23442 23345788888887 9999999999999999999999864 35789999999
Q ss_pred HHHHHHc-----------------------CCCCceEEEEEE
Q 018672 318 TETAFTR-----------------------GSADNITCIVVR 336 (352)
Q Consensus 318 ~~~A~~~-----------------------g~~DNiTvIvv~ 336 (352)
.+.|.+. |..|+||+||..
T Consensus 288 a~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~ 329 (330)
T KOG1379|consen 288 AEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSS 329 (330)
T ss_pred HHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEec
Confidence 9999753 457999999875
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.79 E-value=9.3e-19 Score=156.75 Aligned_cols=178 Identities=24% Similarity=0.350 Sum_probs=96.5
Q ss_pred eccccCCCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHH----HHHHcCCCCcch--HHHHHHHHHHHHH
Q 018672 95 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLF----ENLLKHPQFMTD--TKLAISETYQQTD 168 (352)
Q Consensus 95 ~s~~G~r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~----~~l~~~~~~~~~--~~~~l~~af~~~~ 168 (352)
.|++|.+.+|||++.+... .+..+++|+||+||...++.+++.++ +.+.+....... ....++.+...+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEIL 78 (212)
T ss_dssp ----TTSSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 4678899999999996543 23357799999997666555555544 455545443222 1222232222222
Q ss_pred HHH-----HHhccccccCCCCeEEEEEEeCCeEEEEEeCCceEE-EEeCCceeecCCCCCCCChhHHHHHHHcCCeEEec
Q 018672 169 VDF-----LESERDTYRDDGSTASTAILVGNHLYVANVGDSRTV-ISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWA 242 (352)
Q Consensus 169 ~~i-----~~~~~~~~~~~GsT~~~~~i~~~~l~~anvGDSra~-l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~ 242 (352)
..+ ..........++||++++++.++.++++|+||||+| +.++|++..++.+|+. +...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~----~~~~----------- 143 (212)
T PF13672_consen 79 SIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG----EYPN----------- 143 (212)
T ss_dssp HHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH----HHHH-----------
T ss_pred HHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc----hhhh-----------
Confidence 211 111233455689999999999999999999999996 4679999999999972 1110
Q ss_pred CccccCCccccccccCCcccccccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHH-HHHHHHc
Q 018672 243 GTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED-AVALART 306 (352)
Q Consensus 243 ~~~r~~g~l~vsralGd~~~k~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~e-i~~i~~~ 306 (352)
.++.+.... .....++..+++.++ +.|+|||||||+.+...+ +..++.+
T Consensus 144 ----------~~~~~~~~~----~~~~~~~~~~~~~~~-d~ilL~SDG~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 144 ----------QTRSLTGDD----PEPDVQYGSIPLEEG-DVILLCSDGVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp ----------CTTSCCHHC----CCTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH---
T ss_pred ----------hhhccCccc----cccCCeEEEEEcCCC-CEEEEECcCccccCCCHHHHHHHhhh
Confidence 122232221 122234555666666 999999999999998654 6666654
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.75 E-value=1.8e-16 Score=139.81 Aligned_cols=183 Identities=20% Similarity=0.194 Sum_probs=133.4
Q ss_pred EEEEeccccCCCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHH
Q 018672 91 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVD 170 (352)
Q Consensus 91 ~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~~~~~~~l~~af~~~~~~ 170 (352)
.+......+ .....|++.+.... +...+|+|+||||+...|.+++..+...+.+....... +.+.+..+|+.
T Consensus 5 ~~~~~~~p~-~~~~GD~~~~~~~~---~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~----~~~~l~~~n~~ 76 (193)
T smart00331 5 LIAQYYEDA-TQVGGDFYDVVKLP---EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGIS----LSQILERLNRA 76 (193)
T ss_pred EEEEEEcch-HhcCccEEEEEEeC---CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCC----HHHHHHHHHHH
Confidence 334444444 46777888775432 23579999999998888888888888877654432222 44556666776
Q ss_pred HHHhccccccCCCCeEEEEEE--eCCeEEEEEeCCceEEEEe-CCceeecCCCCCCCChhHHHHHHHcCCeEEecCcccc
Q 018672 171 FLESERDTYRDDGSTASTAIL--VGNHLYVANVGDSRTVISK-AGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRV 247 (352)
Q Consensus 171 i~~~~~~~~~~~GsT~~~~~i--~~~~l~~anvGDSra~l~r-~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~~~r~ 247 (352)
+.... ...+++|++++++ ..++++++|+||+|+|+++ ++...+++.+.
T Consensus 77 l~~~~---~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~-------------------------- 127 (193)
T smart00331 77 IYENG---EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL-------------------------- 127 (193)
T ss_pred HHhcC---CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC--------------------------
Confidence 65542 2347999999998 4789999999999999998 66665555542
Q ss_pred CCccccccccCCcccccccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHcC--CCHHHHHHHHHHHHH
Q 018672 248 GGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTG--EEPEIAARKLTETAF 322 (352)
Q Consensus 248 ~g~l~vsralGd~~~k~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~~--~~~~~~a~~L~~~A~ 322 (352)
++.+|... ..++++..+.+.++ +.|+|+||||||.++.+++.+++++. .++.++++++++.+.
T Consensus 128 ------~~~lG~~~-----~~~~~~~~~~l~~g-d~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 128 ------GAPLGLEP-----DVEVDVRELTLEPG-DLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred ------CceeeeCC-----CCcceeEEEeeCCC-CEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 23456432 34467788888887 99999999999999999999999875 468899998888764
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.64 E-value=1.2e-14 Score=152.34 Aligned_cols=200 Identities=18% Similarity=0.196 Sum_probs=141.0
Q ss_pred ceEEEEecc-ccCCCCCceeEEEeecCCCCceeEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHH
Q 018672 89 KLRCGYSSF-RGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQT 167 (352)
Q Consensus 89 ~~~~g~~s~-~G~r~~neD~~~~~~~~~~~~~~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~~~~~~~l~~af~~~ 167 (352)
++.+|++.. ++.+..+.|++.+.... + ...+++|+||+|+...|..++..+.+.+.+......+ ...++..+
T Consensus 551 ~~~~g~a~~~k~g~~vsGD~y~~~~l~-~--g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~l 623 (764)
T TIGR02865 551 HVSTGVARAAKDGELVSGDSYSFGKLS-A--GKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKTV 623 (764)
T ss_pred eehhhHHHhcCCCCcccCceEEEEEEC-C--CEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHH
Confidence 344445443 33378999999875422 2 3368899999997666666666665554332111112 24566667
Q ss_pred HHHHHHhccccccCCCCeEEEEEEe--CCeEEEEEeCCceEEEEeCCceeecCCCCCCCChhHHHHHHHcCCeEEecCcc
Q 018672 168 DVDFLESERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTW 245 (352)
Q Consensus 168 ~~~i~~~~~~~~~~~GsT~~~~~i~--~~~l~~anvGDSra~l~r~g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~~~ 245 (352)
|..+..... ..+.+|+..++++ .+++.++|+|+++.|+.|++++.+++..+.|
T Consensus 624 N~~L~~~~~---~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP---------------------- 678 (764)
T TIGR02865 624 NSILSLRST---DEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP---------------------- 678 (764)
T ss_pred HHHHHhCCC---CCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce----------------------
Confidence 776544321 2368999988886 6899999999999999999999888765543
Q ss_pred ccCCccccccccCCcccccccccCCceeEEEeeCCCeEEEEEcCCCCCCCChHH-----HHHHHHc--CCCHHHHHHHHH
Q 018672 246 RVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED-----AVALART--GEEPEIAARKLT 318 (352)
Q Consensus 246 r~~g~l~vsralGd~~~k~~v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~e-----i~~i~~~--~~~~~~~a~~L~ 318 (352)
+|-. ...+++..+.++.++ |+|+++|||+||..++.+ +.+++++ ..+|++.++.|+
T Consensus 679 -----------lGil-----~~~~~~~~~~~L~~G-D~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il 741 (764)
T TIGR02865 679 -----------IGIL-----DEVDVELVRKKLKNG-DLIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLL 741 (764)
T ss_pred -----------eEec-----cCCccceEEEEeCCC-CEEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 2211 124567778889887 999999999999886533 6777765 358999999999
Q ss_pred HHHHHcC---CCCceEEEEEEc
Q 018672 319 ETAFTRG---SADNITCIVVRF 337 (352)
Q Consensus 319 ~~A~~~g---~~DNiTvIvv~l 337 (352)
+.+.+.. ..||+|++++++
T Consensus 742 ~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 742 EKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHhcCCCCCCCeEEEEEEe
Confidence 9998753 379999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.48 E-value=5.1e-12 Score=111.12 Aligned_cols=174 Identities=21% Similarity=0.236 Sum_probs=111.5
Q ss_pred eEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHHHHHhccccccCCCCeEEEEEEe--CCeEE
Q 018672 120 VCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHLY 197 (352)
Q Consensus 120 ~~lf~V~DG~GG~~aa~~as~~l~~~l~~~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~GsT~~~~~i~--~~~l~ 197 (352)
..+++|+|+.|..-.|.+.+..+...+........+ ..+.+..+|+.+....... ...+|++++.+. .++++
T Consensus 4 ~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l~ 77 (193)
T PF07228_consen 4 RYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTLT 77 (193)
T ss_dssp EEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEEE
T ss_pred EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEEE
Confidence 468899999995555555554444444322111112 3344555666654332221 367888888876 56899
Q ss_pred EEEeCCceEEEEeC--CceeecCCCCCCCChhHHHHHHHcCCeEEecCccccCCccccccccCCcccccccccCCceeEE
Q 018672 198 VANVGDSRTVISKA--GKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDL 275 (352)
Q Consensus 198 ~anvGDSra~l~r~--g~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vsralGd~~~k~~v~~~P~i~~~ 275 (352)
++|+|+++++++++ +....+.....| +|-.. ..++...++
T Consensus 78 ~~~aG~~~~l~~~~~~~~~~~~~~~~~~---------------------------------lG~~~-----~~~~~~~~~ 119 (193)
T PF07228_consen 78 YANAGHPPPLLLRPGGREIEQLESEGPP---------------------------------LGIFE-----DIDYQEQEI 119 (193)
T ss_dssp EEEESSSEEEEEETTCTEEEEETCSSBB---------------------------------CSSSC-----TTCEEEEEE
T ss_pred EeCCCCCCEEEEeccccceeecccCccc---------------------------------eeeec-----cccccceEE
Confidence 99999999999998 334334333322 34321 234456667
Q ss_pred EeeCCCeEEEEEcCCCCCCCChH-------HHHHHHHc--CCCHHHHHHHHHHHHHHc---CCCCceEEEEEEcc
Q 018672 276 EVDEGFELLVLASDGLWDVVPNE-------DAVALART--GEEPEIAARKLTETAFTR---GSADNITCIVVRFH 338 (352)
Q Consensus 276 ~l~~~d~~lILaSDGlwd~l~~~-------ei~~i~~~--~~~~~~~a~~L~~~A~~~---g~~DNiTvIvv~l~ 338 (352)
.+.++ +.|+|+||||+|....+ .+.+++.+ ..++++.++.|++.+... ...||+|+++++++
T Consensus 120 ~l~~g-d~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 120 QLEPG-DRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp E--TT-EEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred Eeccc-cEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 77787 99999999999998433 44566663 467999999999999874 46899999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.29 E-value=0.00016 Score=70.29 Aligned_cols=186 Identities=20% Similarity=0.181 Sum_probs=115.9
Q ss_pred CCceeEEEeecCCCCceeEEEEEEcCCC-chHHHHHHHHHHHHHHHcCCCC-cchHHHHHHHHHHHHHHHHHHhcccccc
Q 018672 103 TMEDFYDIKTSNVDGQAVCMFGVFDGHG-GSRAAEYLKEHLFENLLKHPQF-MTDTKLAISETYQQTDVDFLESERDTYR 180 (352)
Q Consensus 103 ~neD~~~~~~~~~~~~~~~lf~V~DG~G-G~~aa~~as~~l~~~l~~~~~~-~~~~~~~l~~af~~~~~~i~~~~~~~~~ 180 (352)
-.-|++.+.... .....++|.|..| |-.++-. .......+...... ..++.+. +..+|+.+......
T Consensus 161 vGGD~yd~~~~~---~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~~~----l~~~n~~~~~~~~~--- 229 (367)
T COG2208 161 VGGDYYDFIQLG---EKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPADV----LETLNRVLKQNLEE--- 229 (367)
T ss_pred cCCceEEEEEEC---CcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHHHH----HHHHHHHHHhcccC---
Confidence 556777765432 2457889999999 5555544 22222222211111 2233332 33334433332222
Q ss_pred CCCCeEEEEEEe--CCeEEEEEeCCceEEEEeCCce---eecCCCCCCCChhHHHHHHHcCCeEEecCccccCCcccccc
Q 018672 181 DDGSTASTAILV--GNHLYVANVGDSRTVISKAGKA---IPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSR 255 (352)
Q Consensus 181 ~~GsT~~~~~i~--~~~l~~anvGDSra~l~r~g~~---~~LT~dH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vsr 255 (352)
.+-+|....+++ ...+.++|+|=--+++.+.++. ..++. ...
T Consensus 230 ~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~---------------------------------~g~ 276 (367)
T COG2208 230 DMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTA---------------------------------LGL 276 (367)
T ss_pred CcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccC---------------------------------CCc
Confidence 167788777777 6789999999999888886543 22222 233
Q ss_pred ccCCcccccccccCCceeEEEeeCCCeEEEEEcCCCCC-------CCChHHHHHHHHc--CCCHHHHHHHHHHHHHHcC-
Q 018672 256 AFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWD-------VVPNEDAVALART--GEEPEIAARKLTETAFTRG- 325 (352)
Q Consensus 256 alGd~~~k~~v~~~P~i~~~~l~~~d~~lILaSDGlwd-------~l~~~ei~~i~~~--~~~~~~~a~~L~~~A~~~g- 325 (352)
++|.. ....+.+....+.++ |.+++.|||+.+ .+..+...+++.. ..+|+++++.+.+...+.-
T Consensus 277 piG~~-----~~~~~~~~~~~l~~g-d~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~ 350 (367)
T COG2208 277 PIGLL-----PDYQYEVASLQLEPG-DLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEEILEAILESLEELQG 350 (367)
T ss_pred eeeec-----CCccchheeEEecCC-CEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhC
Confidence 45543 134455666777785 999999999999 4566677777762 3678888888888876643
Q ss_pred ---CCCceEEEEEEcc
Q 018672 326 ---SADNITCIVVRFH 338 (352)
Q Consensus 326 ---~~DNiTvIvv~l~ 338 (352)
..||+|++++++.
T Consensus 351 ~~~~~DDiTll~lk~~ 366 (367)
T COG2208 351 DQIQDDDITLLVLKVK 366 (367)
T ss_pred CccccCceEEEEEEec
Confidence 3688999999975
No 20
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=44.98 E-value=27 Score=24.51 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=22.1
Q ss_pred CChHHHHHHHHcC-CCHHHHHHHHHH
Q 018672 295 VPNEDAVALARTG-EEPEIAARKLTE 319 (352)
Q Consensus 295 l~~~ei~~i~~~~-~~~~~~a~~L~~ 319 (352)
.+++||...++.. .||.+++++|+.
T Consensus 19 hse~eIya~L~ecnMDpnea~qrLL~ 44 (60)
T PF06972_consen 19 HSEEEIYAMLKECNMDPNEAVQRLLS 44 (60)
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 6889999999876 799999999987
No 21
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=42.39 E-value=47 Score=28.98 Aligned_cols=45 Identities=27% Similarity=0.455 Sum_probs=35.5
Q ss_pred CeEEEEEcCCCC-----------CCCChHHHHHHHHcC----CCHHHHHHHHHHHHHHcC
Q 018672 281 FELLVLASDGLW-----------DVVPNEDAVALARTG----EEPEIAARKLTETAFTRG 325 (352)
Q Consensus 281 d~~lILaSDGlw-----------d~l~~~ei~~i~~~~----~~~~~~a~~L~~~A~~~g 325 (352)
||.++..|.|+| |+|.++..-+.+.+. .-|.+.|..|++.-..||
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 578888888888 467777777777653 348999999999998886
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=37.19 E-value=19 Score=26.33 Aligned_cols=23 Identities=22% Similarity=0.203 Sum_probs=16.5
Q ss_pred eeCCCeEEEEEcCCCCCCCChHH
Q 018672 277 VDEGFELLVLASDGLWDVVPNED 299 (352)
Q Consensus 277 l~~~d~~lILaSDGlwd~l~~~e 299 (352)
++..++.+|+++||+|=-+...-
T Consensus 23 l~~~G~Rllva~nGv~lEv~r~W 45 (72)
T PF09436_consen 23 LERPGHRLLVASNGVFLEVRRPW 45 (72)
T ss_pred cccCCcEEEEecCcEEEEEechH
Confidence 34345999999999996554443
No 23
>PRK10693 response regulator of RpoS; Provisional
Probab=30.60 E-value=4.5e+02 Score=24.49 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=55.3
Q ss_pred CCCceeEEEeecCCCCceeEEEEEEc--CCCchHH-HHHHHHHHHHHHHcCC-----CCcchHHHHHHHHHHHHHHHHHH
Q 018672 102 ATMEDFYDIKTSNVDGQAVCMFGVFD--GHGGSRA-AEYLKEHLFENLLKHP-----QFMTDTKLAISETYQQTDVDFLE 173 (352)
Q Consensus 102 ~~neD~~~~~~~~~~~~~~~lf~V~D--G~GG~~a-a~~as~~l~~~l~~~~-----~~~~~~~~~l~~af~~~~~~i~~ 173 (352)
...-|.+.+..-. + +...|.++| |||++.+ +......++..+.... ....+ ..+.+..+|+.+..
T Consensus 148 ~~~GD~~d~~~l~-~--~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~----p~~~l~~lN~~l~~ 220 (303)
T PRK10693 148 DKPGLVLDIAALS-D--NDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPE----LGALLKQVNHLLRQ 220 (303)
T ss_pred CCCccEEeeeecC-C--CcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCC----HHHHHHHHHHHHHh
Confidence 3456777655432 2 223444554 7765543 3344444444333321 11122 34455667777665
Q ss_pred hccccccCCCCeEEEEEEe--CCeEEEEEeCCceEEEEeCCce
Q 018672 174 SERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKA 214 (352)
Q Consensus 174 ~~~~~~~~~GsT~~~~~i~--~~~l~~anvGDSra~l~r~g~~ 214 (352)
..... .-|+..+++. .+++.++|.|-...++..+++.
T Consensus 221 ~~~~~----~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 221 ANLPG----QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred cCCCc----eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 53221 2577777776 5689999999999886444444
No 24
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=27.30 E-value=47 Score=25.75 Aligned_cols=52 Identities=25% Similarity=0.431 Sum_probs=37.2
Q ss_pred eeCCCeEEEEEcCCCCCCCChHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCCceEE
Q 018672 277 VDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITC 332 (352)
Q Consensus 277 l~~~d~~lILaSDGlwd~l~~~ei~~i~~~~~~~~~~a~~L~~~A~~~g~~DNiTv 332 (352)
++++ |-++|+.|||+-.+...+..+-++... ..+-.|.+...+||-.+.++-
T Consensus 22 l~~~-D~vlL~qdGV~aAl~~~~~~~sl~~~p---~~~~alkeDl~ARGl~~~~s~ 73 (96)
T COG2168 22 LTEG-DAVLLLQDGVYAALKGNRYLASLRESP---IKVYALKEDLLARGLTGQISR 73 (96)
T ss_pred hccc-CeEEEEcccchhhhcCcHHHHHHhcCc---cceeeehhhHHhccchhhcCc
Confidence 3455 889999999999999988888777642 334456666677776555543
No 25
>cd08325 CARD_CASP1-like Caspase activation and recruitment domain found in Caspase-1 and related proteins. Caspase activation and recruitment domain (CARD) similar to those found in Caspase-1 (CASP1, ICE) and related proteins, including CARD-only proteins such as ICEBERG or CARD18, INCA (CARD17), CARD16 (COP1, PSEUDO-ICE), CARD8 (DACAR, NDPP1, TUCAN), and CARD12 (NLRC4), as well as ICE-like caspases such as CASP12, CASP5 (ICH-3) and CASP4 (TX, ICH-2). Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. CASP1 plays a central role in the cellular response to a wide variety of microbial and non-microbial stimuli, being activated by the inflammasome or the pyroptosome. CARD8 binds itself and the initiator caspase-9, interfering with the binding of APAF-1 and suppressing caspase-9 activation. CARD12 is a Nod-like receptor (NLR) that plays an important role in the innate immune response to Gram-negative bacteria. Caspase-4 (CASP4), -5 (CASP5),
Probab=24.16 E-value=1.6e+02 Score=21.94 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=28.3
Q ss_pred CCCChHHHHHHHHcCCCHHHHHHHHHHHHHHcCC
Q 018672 293 DVVPNEDAVALARTGEEPEIAARKLTETAFTRGS 326 (352)
Q Consensus 293 d~l~~~ei~~i~~~~~~~~~~a~~L~~~A~~~g~ 326 (352)
++++.+|+..+-.......+.|+.|++....+|.
T Consensus 29 ~Vl~~~E~e~i~~~~~t~~dkar~Lid~v~~KG~ 62 (83)
T cd08325 29 NVLNEEEMEKIKEENNTIMDKARVLVDSVTEKGQ 62 (83)
T ss_pred CCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHhH
Confidence 4788899988887766789999999999888764
No 26
>PF14014 DUF4230: Protein of unknown function (DUF4230)
Probab=20.41 E-value=3.2e+02 Score=22.54 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=28.5
Q ss_pred cccCCceeEEEeeCCCeEEEEEcCCCCCCCChHHHHHHHHc
Q 018672 266 VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART 306 (352)
Q Consensus 266 v~~~P~i~~~~l~~~d~~lILaSDGlwd~l~~~ei~~i~~~ 306 (352)
..|.|.+....++.+.--++-...|+|..++.++..++.+.
T Consensus 74 ~LP~~~i~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (157)
T PF14014_consen 74 TLPPPEILSVEIDEDSIKVYDEKGGWFNPITPEDQNEAQKE 114 (157)
T ss_pred ECCCcEEeeeecCccceEEEEccCCccCCCCHHHHHHHHHH
Confidence 35778888888876533455677888888887777666543
No 27
>cd08787 CARD_NOD2_1_CARD15 Caspase activation and recruitment domain of NOD2, repeat 1. Caspase activation and recruitment domain (CARD) similar to that found in human NOD2 (CARD15), repeat 1. NOD2 is a member of the Nod-like receptor (NLR) family, which plays a central role in the innate immune response. NLRs typically contain an N-terminal effector domain, a central nucleotide-binding domain and a C-terminal ligand-binding region of several leucine-rich repeats (LRRs). In NOD2, as well as NOD1, the N-terminal effector domain is a CARD. NOD2 contains two N-terminal CARD repeats. Mutations in NOD2 have been associated with Crohns disease and Blau syndrome. Nod2-CARDs have been shown to interact with the CARD domain of the downstream effector RICK (RIP2, CARDIAK), a serine/threonine kinase. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are pr
Probab=20.04 E-value=1.3e+02 Score=22.55 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=24.8
Q ss_pred CCCCChHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Q 018672 292 WDVVPNEDAVALARTGEEPEIAARKLTETAFTRG 325 (352)
Q Consensus 292 wd~l~~~ei~~i~~~~~~~~~~a~~L~~~A~~~g 325 (352)
|++++.++...+-.........|++|++....+|
T Consensus 31 ~evlswEDYe~~~~~~~PL~~~aR~LLD~V~~KG 64 (87)
T cd08787 31 QEVLSWEDYEGFHVLGQPLSHNARQLLDTVYNKG 64 (87)
T ss_pred HhHhhHHHHhhhhhcCCchHHHHHHHHHHHHhcC
Confidence 5667777766665445556678999999988886
Done!