Your job contains 1 sequence.
>018675
MEFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS
RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE
VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS
CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI
WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDD
LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANTL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018675
(352 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 1453 7.9e-149 1
TAIR|locus:2123752 - symbol:AT4G32990 "AT4G32990" species... 1047 3.9e-125 2
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 970 1.2e-97 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 928 3.4e-93 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 923 1.1e-92 1
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 916 6.3e-92 1
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 915 8.1e-92 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 913 1.3e-91 1
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 910 2.7e-91 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 909 3.5e-91 1
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 904 1.2e-90 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 898 5.1e-90 1
UNIPROTKB|B4KTK4 - symbol:Ciao1 "Probable cytosolic iron-... 898 5.1e-90 1
UNIPROTKB|B4LJT7 - symbol:Ciao1 "Probable cytosolic iron-... 890 3.6e-89 1
UNIPROTKB|B4JW81 - symbol:Ciao1 "Probable cytosolic iron-... 887 7.5e-89 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 857 1.1e-85 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 855 1.8e-85 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 854 2.4e-85 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 851 4.9e-85 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 847 1.3e-84 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 847 1.3e-84 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 846 1.7e-84 1
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 846 1.7e-84 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 842 4.4e-84 1
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 836 1.9e-83 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 835 2.4e-83 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 780 1.6e-77 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 773 9.0e-77 1
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 753 1.2e-74 1
UNIPROTKB|B7QKS1 - symbol:ISCW023049 "Probable cytosolic ... 647 2.0e-63 1
UNIPROTKB|Q5DFU0 - symbol:Q5DFU0 "Probable cytosolic iron... 620 1.5e-60 1
POMBASE|SPAC806.02c - symbol:SPAC806.02c "Par A family AT... 607 3.5e-59 1
WB|WBGene00012479 - symbol:Y18D10A.9 species:6239 "Caenor... 561 2.6e-54 1
UNIPROTKB|Q9XW12 - symbol:Y18D10A.9 "Probable cytosolic i... 561 2.6e-54 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 537 9.2e-52 1
UNIPROTKB|H9L0T1 - symbol:CIAO1 "Uncharacterized protein"... 505 2.3e-48 1
ASPGD|ASPL0000060163 - symbol:AN1385 species:162425 "Emer... 304 1.6e-37 3
CGD|CAL0000383 - symbol:orf19.4293 species:5476 "Candida ... 396 8.0e-37 1
UNIPROTKB|Q5AG86 - symbol:CIA1 "Probable cytosolic iron-s... 396 8.0e-37 1
UNIPROTKB|A4R7U3 - symbol:CIA1 "Probable cytosolic iron-s... 305 3.1e-35 3
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 328 3.6e-28 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 293 6.6e-26 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 293 1.7e-25 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 251 2.0e-25 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 292 2.3e-25 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 288 3.0e-25 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 284 5.9e-25 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 298 8.6e-25 1
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 233 1.0e-24 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 286 1.1e-24 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 281 1.2e-24 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 281 1.2e-24 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 281 1.2e-24 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 281 1.2e-24 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 281 1.2e-24 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 281 1.2e-24 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 281 1.2e-24 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 281 1.2e-24 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 281 1.2e-24 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 281 1.2e-24 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 280 1.6e-24 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 279 2.0e-24 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 283 2.6e-24 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 281 3.9e-24 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 263 1.6e-22 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 262 2.2e-22 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 252 1.5e-21 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 252 1.5e-21 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 252 1.5e-21 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 252 1.5e-21 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 252 1.5e-21 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 252 1.5e-21 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 252 1.5e-21 1
FB|FBgn0263933 - symbol:ebi "ebi" species:7227 "Drosophil... 261 1.7e-21 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 251 1.9e-21 1
UNIPROTKB|F1MUW4 - symbol:APAF1 "Uncharacterized protein"... 201 1.3e-20 3
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 243 1.3e-20 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 241 2.1e-20 1
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 254 3.2e-20 1
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 254 3.3e-20 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 251 5.7e-20 1
UNIPROTKB|Q4R8H1 - symbol:TBL1X "F-box-like/WD repeat-con... 252 9.9e-20 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 252 1.0e-19 1
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 251 1.1e-19 1
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 251 1.1e-19 1
UNIPROTKB|F1NYZ8 - symbol:TBL1XR1 "Uncharacterized protei... 251 1.1e-19 1
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 251 1.1e-19 1
UNIPROTKB|Q8N0X2 - symbol:SPAG16 "Sperm-associated antige... 244 1.2e-19 2
ASPGD|ASPL0000042645 - symbol:AN1468 species:162425 "Emer... 212 1.2e-19 2
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 236 1.9e-19 2
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 248 2.4e-19 1
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 249 2.4e-19 1
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 249 2.4e-19 1
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 249 2.4e-19 1
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 249 3.0e-19 1
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 248 3.1e-19 1
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 248 3.1e-19 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 226 3.2e-19 2
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 245 3.3e-19 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 245 3.8e-19 1
WARNING: Descriptions of 1313 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 256/348 (73%), Positives = 299/348 (85%)
Query: 4 LDDGNYELREIQTLEGHTDRVWSLAWKPTAG-VDGVAPVFASCSGDKTVRIWEQSASSRF 62
L + N EL EIQ LEGHTDRVWS+AW P + DGV+P+ ASCSGD TVRIWEQS+ SR
Sbjct: 3 LMEKNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRS 62
Query: 63 WNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
W CK VLEE HTRTVRSCAWSPSG+LLATASFD TT IW++ G ++EC++TLEGHENEVK
Sbjct: 63 WTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVK 122
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182
SVSWNASG+ LATC RDKSVWIWEV+ GNE++C +VL GH QDVKMVQWHPTMDVLFSCS
Sbjct: 123 SVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCS 182
Query: 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242
YDNTIKVWW+ED D + + CVQT+ ESNNGHSST+W++SFNA GDK+V+CSDDLT+KIWG
Sbjct: 183 YDNTIKVWWSEDDDGE-YQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWG 241
Query: 243 ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLI 302
DI +MQSG+ YA W HLCT+SGYHDRTI+S HWSR+ IIASGA D++++ FV+SK D +
Sbjct: 242 TDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRLFVDSKHDSV 301
Query: 303 DGPSYKMLLKKEKAHDMDVNSVQWSPGE-RRLLASASDDGMIKIWELA 349
DGPSY +LLKK KAH+ DVNSVQWSPGE RLLASASDDGM+KIW+LA
Sbjct: 302 DGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLA 349
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 1047 (373.6 bits), Expect = 3.9e-125, Sum P(2) = 3.9e-125
Identities = 182/261 (69%), Positives = 224/261 (85%)
Query: 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP--G 150
SFD TC+WE+ D E V+ L GHE+EVKSVSWNASG+LLATCGRDKSVWIWE+ P
Sbjct: 67 SFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEED 126
Query: 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
+EF+ ++VL GH++DVKMV WHPTMDVLFSCSYDNTIK+W +ED D D ++CVQT+SE N
Sbjct: 127 DEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGD-YNCVQTLSELN 185
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT 270
NGHSST+W++SFNA GDK+V+CSDDL +KIW DI+RMQSG+GY W H+CT+SG+HDRT
Sbjct: 186 NGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRT 245
Query: 271 IFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG- 329
I+SVHWSR+G+IASGA DD++Q FV+S D +DGPSYK+L+KKEKAH+MDVNSVQW+P
Sbjct: 246 IYSVHWSRDGVIASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWAPDK 305
Query: 330 ERRLLASASDDGMIKIWELAN 350
E RLLASASDD M+KIW+LA+
Sbjct: 306 ESRLLASASDDKMVKIWKLAS 326
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 76/246 (30%), Positives = 119/246 (48%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE-QSASSRFWNCKAVLEEM 72
+ L GH V S++W + + A+C DK+V IWE Q ++ AVL
Sbjct: 85 VSVLRGHESEVKSVSWNASGSL------LATCGRDKSVWIWEIQPEEDDEFDTIAVLTG- 137
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIW--EDVGGDYECVATLE----GHENEVKSVSW 126
H+ V+ W P+ +L + S+D T IW ED GDY CV TL GH + V S+S+
Sbjct: 138 HSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISF 197
Query: 127 NASGTLLATCGRDKSVWIWEV----MPGNE----FECVSVLQG-HAQDVKMVQWHPTMDV 177
NA+G + TC D +V IW+ M E + V L G H + + V W V
Sbjct: 198 NAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWSRD-GV 256
Query: 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF--NAKGDKLVSCSDD 235
+ S + D+TI+++ D+DS + + + + H + ++ + + + L S SDD
Sbjct: 257 IASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWAPDKESRLLASASDD 316
Query: 236 LTIKIW 241
+KIW
Sbjct: 317 KMVKIW 322
Score = 237 (88.5 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 74/263 (28%), Positives = 126/263 (47%)
Query: 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE--- 102
S D +WE A+ +VL H V+S +W+ SG LLAT D + IWE
Sbjct: 67 SFDGNTCVWENFATDS--ESVSVLRG-HESEVKSVSWNASGSLLATCGRDKSVWIWEIQP 123
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW--EVMPGNEFECVSVLQ 160
+ +++ +A L GH +VK V W+ + +L +C D ++ IW E G ++ CV L
Sbjct: 124 EEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDG-DYNCVQTLS 182
Query: 161 ----GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN------WHCVQTISESN 210
GH+ V + ++ D + +CS D +K+W + + + W V T+S
Sbjct: 183 ELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLS--- 239
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT 270
H TI+++ ++ G DD TI+++ D + S DG S++ L H+
Sbjct: 240 GFHDRTIYSVHWSRDGVIASGAGDD-TIQLF-VD-SDSDSVDG-PSYKLLVKKEKAHEMD 295
Query: 271 IFSVHWS--REGIIASGAADDSV 291
+ SV W+ +E + + A+DD +
Sbjct: 296 VNSVQWAPDKESRLLASASDDKM 318
Score = 203 (76.5 bits), Expect = 3.9e-125, Sum P(2) = 3.9e-125
Identities = 41/77 (53%), Positives = 50/77 (64%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC 65
D N L E+Q LEGHTDRVW++AW P A DGV ASCS DKTVRIWEQS+ +R W C
Sbjct: 5 DKNLGLEEVQKLEGHTDRVWNVAWNPAA--DGV---IASCSADKTVRIWEQSSLTRSWTC 59
Query: 66 KAVLEEMHTRTVRSCAW 82
K + + + +C W
Sbjct: 60 K-LGHRLGSFDGNTCVW 75
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 45/143 (31%), Positives = 68/143 (47%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
E I L GH++ V + W PT V +F SCS D T++IW +NC L
Sbjct: 128 EFDTIAVLTGHSEDVKMVLWHPTMDV-----LF-SCSYDNTIKIWCSEDEDGDYNCVQTL 181
Query: 70 EEM---HTRTVRSCAWSPSGKLLATASFDATTCIWE-DVG----GD----YECVATLEG- 116
E+ H+ TV S +++ +G + T S D IW+ D+ G+ + V TL G
Sbjct: 182 SELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGF 241
Query: 117 HENEVKSVSWNASGTLLATCGRD 139
H+ + SV W+ G + + G D
Sbjct: 242 HDRTIYSVHWSRDGVIASGAGDD 264
Score = 64 (27.6 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 71 EMHTRTVRSCAWSPSGK-LLATASFDATTCIWE 102
E HT V + AW+P+ ++A+ S D T IWE
Sbjct: 17 EGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
Identities = 174/335 (51%), Positives = 231/335 (68%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRT 76
+ GH DRVWS+AW P +G V ASC GDKT+RIW + W CK +LE+ H RT
Sbjct: 1 MTGHEDRVWSVAWSP----NGF--VLASCGGDKTIRIWGKEGDK--WICKTILEDGHQRT 52
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+RS WSP G LA+ASFDATTCIW+ G++EC ATLEGHENEVKSV W+ SG+LLATC
Sbjct: 53 IRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATC 112
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
GRDKSVWIWEV +E+EC SV+ H QDVK V WHPT ++L SCSYD+TIK++ D
Sbjct: 113 GRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLY---KED 169
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---DG 253
D+W C T+ GH ST+W++SF+ GD++VSCSDD T++IW + Q G G
Sbjct: 170 EDDWSCCDTLE----GHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSG 225
Query: 254 -YASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLL 311
+ W+ +C +SGYHDRTI+ VHWS+ G+IA+ + DD ++ F E + + PS++++
Sbjct: 226 KHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVA 285
Query: 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ KAH MDVNS+ W P + +LA+ SDDG +K+W
Sbjct: 286 TQRKAHSMDVNSICWHPKDENILATCSDDGTVKLW 320
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 83/250 (33%), Positives = 136/250 (54%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G +E TLEGH + V S+ W V G + A+C DK+V IWE + C
Sbjct: 82 GEFECNA--TLEGHENEVKSVDWS----VSG--SLLATCGRDKSVWIWEVQEDDEY-ECA 132
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
+V+ HT+ V+ W P+ ++LA+ S+D T ++++ D+ C TLEGHE+ V S+S+
Sbjct: 133 SVIHS-HTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISF 191
Query: 127 NASGTLLATCGRDKSVWIWEVMP-GNE-----------FECVSVLQG-HAQDVKMVQWHP 173
+ SG + +C DK+V IW+ P GN+ ++CV VL G H + + V W
Sbjct: 192 DGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSK 251
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSD-NWHCVQTISESNNGHSSTIWALSFNAKGDK-LVS 231
++ + S D+ I+++ EDT+SD N Q ++ HS + ++ ++ K + L +
Sbjct: 252 VSGLIATASGDDCIRIF-KEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILAT 310
Query: 232 CSDDLTIKIW 241
CSDD T+K+W
Sbjct: 311 CSDDGTVKLW 320
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 16 TLEGHTDRVWSLAWKPTA------GVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
TLEGH VWS+++ + D ++ S + ++ W C VL
Sbjct: 178 TLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTK-WKCVCVL 236
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGD-----YECVATL-EGHENEVK 122
H RT+ WS L+ATAS D I+ ED D ++ VAT + H +V
Sbjct: 237 SGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVN 296
Query: 123 SVSWNASG-TLLATCGRDKSVWIWEVMPGNE 152
S+ W+ +LATC D +V +W P E
Sbjct: 297 SICWHPKDENILATCSDDGTVKLWRFTPAEE 327
Score = 142 (55.0 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH +W+++++ G L SC D TI+IWG + GD W + H RTI
Sbjct: 3 GHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKE------GD---KWICKTILEDGHQRTI 53
Query: 272 FSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331
S+ WS G + A+ D+ + K ++ E H+ +V SV WS
Sbjct: 54 RSLGWSPCGTFLASASFDATTCIWDQKSG-----EFECNATLE-GHENEVKSVDWSVSGS 107
Query: 332 RLLASASDDGMIKIWEL 348
LLA+ D + IWE+
Sbjct: 108 -LLATCGRDKSVWIWEV 123
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 174/340 (51%), Positives = 225/340 (66%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P V FASC DK +R+W S S W+ K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRVW--SLSGNTWSTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT D+L S SYDNTIK++
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQL 180
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---- 251
DSD W C T+S H+ST+W++ F+A+GD+LVSCSDD T+KIW A +G
Sbjct: 181 DSD-WDCTATLSS----HTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATP 235
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D + W+ +CT+SG H R I+ V W + G+IA+G DD ++ F E+ D D P+++ L
Sbjct: 236 DKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQL 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
+E AH+ DVN+V+W+P L S SDDG IKIW++A+
Sbjct: 296 TAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVAD 335
Score = 217 (81.4 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 69/215 (32%), Positives = 97/215 (45%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W PT + AS S D T++++ +S
Sbjct: 131 EVAGDDEFECAAV--LNAHTQDVKRVVWHPTKDI------LASASYDNTIKMFAESQLDS 182
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV--GGD-----------Y 108
W+C A L HT TV S + G L + S D T IW G D +
Sbjct: 183 DWDCTATLSS-HTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVW 241
Query: 109 ECVATLEG-HENEVKSVSWNASGTLLAT-CGRDKSVWIWEVMPGNE-----FECVSVLQ- 160
+CV TL G H + VSW L+AT CG D + I++ ++ FE ++ +
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATGCG-DDGIRIFKETSDSKRDEPTFEQLTAEET 300
Query: 161 GHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAED 194
H QDV V+W+P + L SCS D TIK+W D
Sbjct: 301 AHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVAD 335
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 173/338 (51%), Positives = 223/338 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P V FASC DK +R+W S S W+ K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRVW--SLSGNTWSTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT D+L S SYDNTIK++
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQL 180
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---- 251
DSD W C T+S H+ST+W++ F+A+GD+LVSCSDD T+KIW A +G
Sbjct: 181 DSD-WDCTATLSS----HTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATP 235
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D + W+ +CT+SG H R I+ V W + G+IA+G DD ++ F E+ D D P+++ L
Sbjct: 236 DKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQL 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+E AH+ DVN+V+W+P L S SDDG IKIW++
Sbjct: 296 TAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 83/255 (32%), Positives = 133/255 (52%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G +E TLEGH + V S++W + G+ A+CS DK+V IWE + F C
Sbjct: 91 GEFECNA--TLEGHENEVKSVSWSRSGGL------LATCSRDKSVWIWEVAGDDEF-ECA 141
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED--VGGDYECVATLEGHENEVKSV 124
AVL HT+ V+ W P+ +LA+AS+D T ++ + + D++C ATL H + V S+
Sbjct: 142 AVLNA-HTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSI 200
Query: 125 SWNASGTLLATCGRDKSVWIWEVM-PGNE-----------FECVSVLQG-HAQDVKMVQW 171
++A G L +C DK++ IW PGN+ ++CV L G H++ + V W
Sbjct: 201 DFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSW 260
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWH-CVQTISESNNGHSSTIWALSFN-AKGDKL 229
++ + D+ I+++ E +DS + ++ H + A+ +N A +L
Sbjct: 261 CKLTGLIATGCGDDGIRIF-KETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQL 319
Query: 230 VSCSDDLTIKIWGAD 244
+SCSDD TIKIW D
Sbjct: 320 ISCSDDGTIKIWKVD 334
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH IW ++++ KG+ SC +D I++W SG+ +W +S H RTI
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSL------SGN---TWSTKTILSDGHKRTI 62
Query: 272 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ WS G +AS + D + + +S + + + H+ +V SV WS
Sbjct: 63 REIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLE-------GHENEVKSVSWSRSG 115
Query: 331 RRLLASASDDGMIKIWELA 349
LLA+ S D + IWE+A
Sbjct: 116 G-LLATCSRDKSVWIWEVA 133
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 63/215 (29%), Positives = 91/215 (42%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPT------AGVDGVAPVFASCSGDKTVRIWE 55
E D +E + L HT V + W PT A D +FA D W+
Sbjct: 131 EVAGDDEFECAAV--LNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSD---WD 185
Query: 56 QSAS-----SRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT--ASFDATTCIWEDVGGDY 108
+A+ S W+ E R V SC+ + K+ DA D +
Sbjct: 186 CTATLSSHTSTVWSIDFDAEG--DRLV-SCSDDKTLKIWRAYHPGNDAGIAT-PDKQSVW 241
Query: 109 ECVATLEG-HENEVKSVSWNASGTLLAT-CGRDKSVWIWEVMPGNE-----FECVSVLQ- 160
+CV TL G H + VSW L+AT CG D + I++ ++ FE ++ +
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATGCG-DDGIRIFKETSDSKRDEPTFEQLTAEET 300
Query: 161 GHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAED 194
H QDV V+W+P + L SCS D TIK+W +D
Sbjct: 301 AHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVDD 335
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 175/338 (51%), Positives = 222/338 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P V FASC DK +RIW + S+ W+ K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIWSLTGST--WSTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT +VL S SYDNTIK++ AED
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMY-AEDP 179
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---- 251
++W C T++ H+STIW + F+A G++LVSCSDD TIKIW A +G
Sbjct: 180 VDNDWDCTATLTS----HTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSAGVATP 235
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D W+ +CT+SG H R I+ V W + G+IA+ DD ++ F E+ D D P+++ L
Sbjct: 236 DQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQL 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+E AHD DVNSVQW+P L S SDDG IKIW++
Sbjct: 296 TAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 216 (81.1 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 66/211 (31%), Positives = 97/211 (45%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W PT V AS S D T++++ +
Sbjct: 131 EVAGDDEFECAAV--LNSHTQDVKRVVWHPTK------EVLASASYDNTIKMYAEDPVDN 182
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-----DVGG----D----Y 108
W+C A L HT T+ + G+ L + S D T IW+ + G D +
Sbjct: 183 DWDCTATLTS-HTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVW 241
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV TL G H + VSW +G + CG D + I++ ++ FE ++ +G
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACG-DDGIRIFKETSDSKPDEPTFEQLTAEEG 300
Query: 162 -HAQDVKMVQWHPTM-DVLFSCSYDNTIKVW 190
H QDV VQW+P + L SCS D TIK+W
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH IW ++++ KG+ SC +D I+IW +G ++W +S H RTI
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL------TG---STWSTKTILSDGHKRTI 62
Query: 272 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ WS G +AS + D + + +S + + + H+ +V SV WS
Sbjct: 63 REIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLE-------GHENEVKSVSWSRSG 115
Query: 331 RRLLASASDDGMIKIWELA 349
LLA+ S D + IWE+A
Sbjct: 116 G-LLATCSRDKSVWIWEVA 133
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 173/338 (51%), Positives = 221/338 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P V FASC DK +RIW S + W+ K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIW--SLTGNTWSTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT D+L S SYDNTIK++ E
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPI 180
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA----DITRMQSG 251
D+D W C T++ H+ST+W + F+A G++LVSCSDD TIKIW A + + +
Sbjct: 181 DND-WDCTATLTS----HTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATP 235
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D W+ +CT+SG H R I+ V W + G+IA+ DD ++ F ES D D P+++ +
Sbjct: 236 DQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKPDEPTFEQI 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+E AHD DVNSVQW+P L S SDDG IKIW++
Sbjct: 296 TAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 213 (80.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 65/211 (30%), Positives = 96/211 (45%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W PT + AS S D T++++ +
Sbjct: 131 EVAGDDEFECAAV--LNPHTQDVKRVVWHPTKDI------LASASYDNTIKMFAEEPIDN 182
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-----DVGG----D----Y 108
W+C A L HT TV + G+ L + S D T IW + G D +
Sbjct: 183 DWDCTATLTS-HTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVW 241
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV T+ G H + VSW +G + CG D + I++ ++ FE ++ +G
Sbjct: 242 KCVCTVSGQHSRAIYDVSWCKLTGLIATACG-DDGIRIFKESSDSKPDEPTFEQITAEEG 300
Query: 162 -HAQDVKMVQWHPTM-DVLFSCSYDNTIKVW 190
H QDV VQW+P + L SCS D TIK+W
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH IW ++++ KG+ SC +D I+IW +G+ +W +S H RTI
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL------TGN---TWSTKTILSDGHKRTI 62
Query: 272 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ WS G +AS + D + + +S + + + H+ +V SV WS
Sbjct: 63 REIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLE-------GHENEVKSVSWSRSG 115
Query: 331 RRLLASASDDGMIKIWELA 349
LLA+ S D + IWE+A
Sbjct: 116 G-LLATCSRDKSVWIWEVA 133
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 173/338 (51%), Positives = 220/338 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P V FASC DK +RIW S + W+ K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIW--SLTGNTWSTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT ++L S SYDNTIK++ E
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPI 180
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---- 251
D+D W C T++ H+STIW + F+A G++LVSCSDD T+KIW A +G
Sbjct: 181 DND-WDCTATLTS----HTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPGNSAGVATP 235
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D W+ +CT+SG H R I+ V W + G+IA+ DD ++ F E+ D D P+++ L
Sbjct: 236 DQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQL 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+E AHD DVNSVQW+P L S SDDG IKIW++
Sbjct: 296 TAEESAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 209 (78.6 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W PT + AS S D T++++ +
Sbjct: 131 EVAGDDEFECAAV--LNSHTQDVKRVVWHPTK------EILASASYDNTIKMYAEEPIDN 182
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-----DVGG----D----Y 108
W+C A L HT T+ + G+ L + S D T IW + G D +
Sbjct: 183 DWDCTATLTS-HTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTVW 241
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV TL G H + VSW +G + CG D + I++ ++ FE ++ +
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACG-DDGIRIFKETSDSKPDEPTFEQLTAEES 300
Query: 162 -HAQDVKMVQWHPTM-DVLFSCSYDNTIKVW 190
H QDV VQW+P + L SCS D TIK+W
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH IW ++++ KG+ SC +D I+IW +G+ +W +S H RTI
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL------TGN---TWSTKTILSDGHKRTI 62
Query: 272 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ WS G +AS + D + + +S + + + H+ +V SV WS
Sbjct: 63 REIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLE-------GHENEVKSVSWSRSG 115
Query: 331 RRLLASASDDGMIKIWELA 349
LLA+ S D + IWE+A
Sbjct: 116 G-LLATCSRDKSVWIWEVA 133
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 172/339 (50%), Positives = 222/339 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P V FASC DK +RIW S + W+ K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIW--SLTGNTWSTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT DVL S SYDNTIK++ E
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPI 180
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA----DITRMQSG 251
D+D W C T++ H+ST+W + F+A G++LVSCSDD TIKIW A + + +
Sbjct: 181 DND-WDCTATLTS----HTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPGNTAGVATP 235
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
+ W+ +CT+SG H R I+ V W + G+IA+ DD ++ F E+ D D P+++ +
Sbjct: 236 EQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQI 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
+E AHD DVNSVQW+P L S SDDG IKIW+++
Sbjct: 296 TAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVS 334
Score = 213 (80.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 65/211 (30%), Positives = 96/211 (45%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W PT V AS S D T++++ +
Sbjct: 131 EVAGDDEFECAAV--LNPHTQDVKRVVWHPTKDV------LASASYDNTIKMFAEEPIDN 182
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-----DVGGD--------Y 108
W+C A L HT TV + G+ L + S D T IW+ + G +
Sbjct: 183 DWDCTATLTS-HTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTVW 241
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV T+ G H + VSW +G + CG D + I++ ++ FE ++ +G
Sbjct: 242 KCVCTVSGQHSRAIYDVSWCKLTGLIATACG-DDGIRIFKETSDSKPDEPTFEQITAEEG 300
Query: 162 -HAQDVKMVQWHPTM-DVLFSCSYDNTIKVW 190
H QDV VQW+P + L SCS D TIK+W
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 172/339 (50%), Positives = 221/339 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P V FASC DK +RIW S + W K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIW--SLTGNTWGTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT DVL S SYDNTIK++ E
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPI 180
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA----DITRMQSG 251
D+D W C T++ H+ST+W + F+A G++LVSCSDD TIKIW A + + +
Sbjct: 181 DND-WDCTATLTS----HTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATP 235
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
+ W+ +CT+SG H R I+ V W + G+IA+ DD ++ F E+ D D P+++ +
Sbjct: 236 EQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQI 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
+E AHD DVNSVQW+P L S SDDG IKIW+++
Sbjct: 296 TAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVS 334
Score = 212 (79.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 65/211 (30%), Positives = 95/211 (45%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W PT V AS S D T++++ +
Sbjct: 131 EVAGDDEFECAAV--LNPHTQDVKRVVWHPTKDV------LASASYDNTIKMFAEEPIDN 182
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-----DVGGD--------Y 108
W+C A L HT TV + G+ L + S D T IW + G +
Sbjct: 183 DWDCTATLTS-HTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPEQQTVW 241
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV T+ G H + VSW +G + CG D + I++ ++ FE ++ +G
Sbjct: 242 KCVCTVSGQHSRAIYDVSWCKLTGLIATACG-DDGIRIFKETSDSKPDEPTFEQITAEEG 300
Query: 162 -HAQDVKMVQWHPTM-DVLFSCSYDNTIKVW 190
H QDV VQW+P + L SCS D TIK+W
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 171/338 (50%), Positives = 220/338 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P FASC DK +RIW S +S W+ K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNT------FASCGEDKAIRIWSLSGNS--WSTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT ++L S SYDNTIK++
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESAL 180
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---- 251
DSD W C T+S H+ST+W++ F+A G++LVSCSDD T+KIW A +G
Sbjct: 181 DSD-WDCTATLSS----HTSTVWSIDFDADGERLVSCSDDTTLKIWRAYHPGNDAGVATP 235
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D W+ +CT+SG H R I+ V W + G+IA+ DD ++ F ES D D P+++ +
Sbjct: 236 DKQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKRDEPTFEQV 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+E AH+ DVNSV+W+P L S SDDG IKIW++
Sbjct: 296 TAEESAHEQDVNSVEWNPVMAGQLISCSDDGTIKIWKM 333
Score = 229 (85.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 69/211 (32%), Positives = 97/211 (45%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W PT + AS S D T++++ +SA
Sbjct: 131 EVAGDDEFECAAV--LNPHTQDVKRVVWHPTK------EILASASYDNTIKMFAESALDS 182
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV--GGD-----------Y 108
W+C A L HT TV S + G+ L + S D T IW G D +
Sbjct: 183 DWDCTATLSS-HTSTVWSIDFDADGERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVW 241
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV TL G H + VSW +G + CG D + I++ ++ FE V+ +
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACG-DDGIRIFKESSDSKRDEPTFEQVTAEES 300
Query: 162 -HAQDVKMVQWHPTM-DVLFSCSYDNTIKVW 190
H QDV V+W+P M L SCS D TIK+W
Sbjct: 301 AHEQDVNSVEWNPVMAGQLISCSDDGTIKIW 331
Score = 153 (58.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 43/139 (30%), Positives = 66/139 (47%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH IW ++++ KG+ SC +D I+IW SG+ SW +S H RTI
Sbjct: 12 GHKGRIWGVAWHPKGNTFASCGEDKAIRIWSL------SGN---SWSTKTILSDGHKRTI 62
Query: 272 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ WS G +AS + D + + +S + + + H+ +V SV WS
Sbjct: 63 REIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLE-------GHENEVKSVSWSKSG 115
Query: 331 RRLLASASDDGMIKIWELA 349
LLA+ S D + IWE+A
Sbjct: 116 G-LLATCSRDKSVWIWEVA 133
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 173/339 (51%), Positives = 221/339 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P V FASC DK +RIW S + W K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIW--SLNGNTWTTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFD TT IW G++EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHPT ++L S SYDNTIK++ AED
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKMF-AEDA 179
Query: 196 -DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG--- 251
DSD W CV T+S H+ST+W++ F+A G++LVSCSDD ++KIW A +G
Sbjct: 180 LDSD-WDCVATLSS----HTSTVWSIDFDATGERLVSCSDDTSLKIWQAYHPGNDAGVAT 234
Query: 252 -DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKM 309
D W+ +CTISG H R I+ V W + +IA+ DD ++ F E+ D D P+++
Sbjct: 235 PDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATACGDDGIRIFKETSDSKRDEPTFEQ 294
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
L +E AHD DVNSV+W+P L S SDDG IK+W++
Sbjct: 295 LTAEEGAHDQDVNSVEWNPVVEGQLISCSDDGTIKVWKM 333
Score = 222 (83.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 68/211 (32%), Positives = 101/211 (47%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W PT + AS S D T++++ + A
Sbjct: 131 EVAGDDEFECAAV--LNPHTQDVKRVVWHPTK------ELLASASYDNTIKMFAEDALDS 182
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV--GGD-----------Y 108
W+C A L HT TV S + +G+ L + S D + IW+ G D +
Sbjct: 183 DWDCVATLSS-HTSTVWSIDFDATGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVW 241
Query: 109 ECVATLEG-HENEVKSVSWNASGTLLAT-CGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV T+ G H + VSW L+AT CG D + I++ ++ FE ++ +G
Sbjct: 242 KCVCTISGQHSRAIYDVSWCKLTNLIATACG-DDGIRIFKETSDSKRDEPTFEQLTAEEG 300
Query: 162 -HAQDVKMVQWHPTMD-VLFSCSYDNTIKVW 190
H QDV V+W+P ++ L SCS D TIKVW
Sbjct: 301 AHDQDVNSVEWNPVVEGQLISCSDDGTIKVW 331
Score = 146 (56.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH IW ++++ KG+ SC +D I+IW + G+ +W +S H RTI
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLN------GN---TWTTKTILSDGHKRTI 62
Query: 272 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ WS G +AS + D + + +S + + + H+ +V SV WS
Sbjct: 63 REIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLE-------GHENEVKSVSWSRSG 115
Query: 331 RRLLASASDDGMIKIWELA 349
LLA+ S D + IWE+A
Sbjct: 116 G-LLATCSRDKSVWIWEVA 133
Score = 139 (54.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE-----QSAS------SRF 62
+ TL HT VWS+ + D SCS D +++IW+ A
Sbjct: 187 VATLSSHTSTVWSIDF------DATGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTV 240
Query: 63 WNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD------YECVATLEG 116
W C + H+R + +W L+ATA D I+++ +E + EG
Sbjct: 241 WKCVCTISGQHSRAIYDVSWCKLTNLIATACGDDGIRIFKETSDSKRDEPTFEQLTAEEG 300
Query: 117 -HENEVKSVSWN--ASGTLLATCGRDKSVWIWEV 147
H+ +V SV WN G L++ C D ++ +W++
Sbjct: 301 AHDQDVNSVEWNPVVEGQLIS-CSDDGTIKVWKM 333
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 173/338 (51%), Positives = 220/338 (65%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P FASC DK +RIW S S W K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNS------FASCGEDKAIRIW--SLSGNTWTTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW +EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIWSK----HECTATLEGHENEVKSVSWSRSGGLLAT 116
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H+QDVK V WHPT ++L S SYDNTIK++
Sbjct: 117 CSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESAL 176
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---- 251
DSD W C T+S H+ST+W++ F+A G++LVSCSDD T+KIW A ++G
Sbjct: 177 DSD-WDCTATLSS----HTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNEAGIATP 231
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D W+ +CT+SG H R I+ V W + G+IAS DD+++ F ES D D PS+++L
Sbjct: 232 DKTTVWKCVCTLSGLHTRAIYDVSWCKLTGLIASACGDDAIRIFKESSDSKRDAPSFELL 291
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+E AH+ DVN+V+W+P L S SDDG IKIW+L
Sbjct: 292 TSEESAHEQDVNAVEWNPVNVGQLISCSDDGTIKIWKL 329
Score = 223 (83.6 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L H+ V + W PT + AS S D T++++ +SA
Sbjct: 127 EVAGDDEFECAAV--LNAHSQDVKRVVWHPTK------EILASASYDNTIKMYAESALDS 178
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV--GGD-----------Y 108
W+C A L HT TV S + G+ L + S DAT IW G + +
Sbjct: 179 DWDCTATLSS-HTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVW 237
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECV-SVLQ 160
+CV TL G H + VSW +G + + CG D ++ I++ ++ FE + S
Sbjct: 238 KCVCTLSGLHTRAIYDVSWCKLTGLIASACG-DDAIRIFKESSDSKRDAPSFELLTSEES 296
Query: 161 GHAQDVKMVQWHPT-MDVLFSCSYDNTIKVW 190
H QDV V+W+P + L SCS D TIK+W
Sbjct: 297 AHEQDVNAVEWNPVNVGQLISCSDDGTIKIW 327
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 172/338 (50%), Positives = 218/338 (64%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P FASC DK +RIW S S W K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNS------FASCGEDKAIRIW--SLSGNTWTTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW +EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIWSK----HECTATLEGHENEVKSVSWSRSGGLLAT 116
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H+QDVK V WHPT +VL S SYDNTIK++
Sbjct: 117 CSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESAL 176
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---- 251
DSD W C T+S H+ST+W++ F+A G++LVSCSDD T+KIW A +G
Sbjct: 177 DSD-WDCTATLSS----HTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNDAGIATP 231
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D W+ +CT+SG H R I+ V W ++ G+IAS DD ++ F E D D P++++L
Sbjct: 232 DKTTVWKCVCTLSGEHSRAIYDVSWCKQTGLIASACGDDGIRIFKECSDSKRDAPTFELL 291
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+E AH+ DVN+V+W+P L S SDDG IKIW+L
Sbjct: 292 TAEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKL 329
Score = 231 (86.4 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 69/211 (32%), Positives = 99/211 (46%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L H+ V + W PT V AS S D T++++ +SA
Sbjct: 127 EVAGDDEFECAAV--LNAHSQDVKRVVWHPTK------EVLASASYDNTIKMFAESALDS 178
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV--GGD-----------Y 108
W+C A L HT TV S + G+ L + S DAT IW G D +
Sbjct: 179 DWDCTATLSS-HTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNDAGIATPDKTTVW 237
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV TL G H + VSW +G + + CG D + I++ ++ FE ++ +
Sbjct: 238 KCVCTLSGEHSRAIYDVSWCKQTGLIASACG-DDGIRIFKECSDSKRDAPTFELLTAEES 296
Query: 162 -HAQDVKMVQWHP-TMDVLFSCSYDNTIKVW 190
H QDV V+W+P T L SCS D TIK+W
Sbjct: 297 AHEQDVNAVEWNPVTAGQLISCSDDGTIKIW 327
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 169/338 (50%), Positives = 219/338 (64%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL+GH R+W +AW P FASC DK +RIW QS ++ W K +L + H R
Sbjct: 9 TLQGHKGRIWGVAWHPKGNS------FASCGEDKAIRIWSQSGNT--WTTKTILSDGHKR 60
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
T+R WSP G+ LA+ASFDATT IW +EC ATLEGHENEVKSVSW+ SG LLAT
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIWSK----HECNATLEGHENEVKSVSWSQSGGLLAT 116
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVWIWEV +EFEC +VL H QDVK V WHP+ ++L S SYDNTIK++
Sbjct: 117 CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESAL 176
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---- 251
DSD W C T+S H+ST+W++ F A G++LVSCSDD T+KIW A ++G
Sbjct: 177 DSD-WDCTATLSS----HTSTVWSIDFEADGERLVSCSDDTTLKIWRAYHPGNEAGIATP 231
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
D W+ +CT++G H R ++ V W + G+IAS DD ++ F ES D D P++++L
Sbjct: 232 DKTTVWKCVCTVAGQHSRAVYDVSWCKLTGLIASACGDDGIRIFKESSDSKRDEPTFELL 291
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+E AH+ DVN+V+W+P L S SDDG IKIW+L
Sbjct: 292 TAEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKL 329
Score = 220 (82.5 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 66/211 (31%), Positives = 98/211 (46%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
E D +E + L HT V + W P+ + AS S D T++++ +SA
Sbjct: 127 EVAGDDEFECAAV--LNAHTQDVKRVVWHPSK------EILASASYDNTIKMYAESALDS 178
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV--GGD-----------Y 108
W+C A L HT TV S + G+ L + S D T IW G + +
Sbjct: 179 DWDCTATLSS-HTSTVWSIDFEADGERLVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVW 237
Query: 109 ECVATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161
+CV T+ G H V VSW +G + + CG D + I++ ++ FE ++ +
Sbjct: 238 KCVCTVAGQHSRAVYDVSWCKLTGLIASACG-DDGIRIFKESSDSKRDEPTFELLTAEES 296
Query: 162 -HAQDVKMVQWHP-TMDVLFSCSYDNTIKVW 190
H QDV V+W+P T L SCS D TIK+W
Sbjct: 297 AHEQDVNAVEWNPVTAGQLISCSDDGTIKIW 327
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 165/343 (48%), Positives = 213/343 (62%)
Query: 8 NYELREIQTLEGHTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
N L +Q H D R W +AW P + ASC GD+T+RIW + S W CK
Sbjct: 2 NDTLALLQKFNAHPDSRCWYVAWNPKG------TLLASCGGDRTIRIWGREGDS--WECK 53
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
VL++ H RTVR AWSP G LA+ASFDATTCIW+ D+EC+ LEGHENEVK V+W
Sbjct: 54 TVLQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAW 113
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
SG LLATC RDKSVWIWEV NE+ECVSV+ H QDVK V WHPT ++L SCSYDN
Sbjct: 114 APSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNN 173
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+ V+ ED D+W C T+ GH+ST+W L+F+ G +L SCSDD T+KIW
Sbjct: 174 VCVYKEED---DDWECRATLE----GHTSTVWGLTFDPSGQRLASCSDDCTVKIWKE--C 224
Query: 247 RMQSG-DGY-ASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLID 303
+ + G +G A+W+ +CT+SG+H RT++ + W G +A+ DD V+ F E + D
Sbjct: 225 QPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPD 284
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
P++ + KAH DVN + W P E LL S SD+G I +W
Sbjct: 285 QPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSCSDNGEIAVW 327
Score = 225 (84.3 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 66/204 (32%), Positives = 95/204 (46%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
++ YE + + HT V + W PT + ASCS D V ++++ W
Sbjct: 136 EENEYEC--VSVVNSHTQDVKHVVWHPTQ------ELLASCSYDNNVCVYKEEDDD--WE 185
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV---GGD------YECVATLE 115
C+A LE HT TV + PSG+ LA+ S D T IW++ GG ++CV TL
Sbjct: 186 CRATLEG-HTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLS 244
Query: 116 G-HENEVKSVSW-NASGTLLATCGRDKSVWIWE----VMPGNEFECVS--VLQGHAQDVK 167
G H V ++W +G L CG D V +++ P +S V + H QDV
Sbjct: 245 GFHGRTVYDIAWCPLTGALATACG-DDGVRVFKEDETADPDQPAFSLSAHVPKAHTQDVN 303
Query: 168 MVQWHPT-MDVLFSCSYDNTIKVW 190
+ WHP +L SCS + I VW
Sbjct: 304 CIAWHPKEAGLLVSCSDNGEIAVW 327
Score = 163 (62.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 46/139 (33%), Positives = 66/139 (47%)
Query: 211 NGH-SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 269
N H S W +++N KG L SC D TI+IWG + GD SW + H R
Sbjct: 12 NAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGRE------GD---SWECKTVLQDGHQR 62
Query: 270 TIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329
T+ V WS G + A+ D+ + K+D ++ L E H+ +V V W+P
Sbjct: 63 TVRKVAWSPCGNYLASASFDATTCIWKKKND-----DFECLTVLE-GHENEVKCVAWAPS 116
Query: 330 ERRLLASASDDGMIKIWEL 348
LLA+ S D + IWE+
Sbjct: 117 GN-LLATCSRDKSVWIWEV 134
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 167/334 (50%), Positives = 216/334 (64%)
Query: 20 HTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
H D R W LAW P AG + ASC GD++VRIW + S W CK+VL E H RTVR
Sbjct: 14 HPDSRCWFLAWNP-AGT-----LLASCGGDRSVRIWGREGDS--WICKSVLCEGHQRTVR 65
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
AWSP G LA+ASFDATTCIW+ D+ECV TLEGHENEVKSV+W SG LLATC R
Sbjct: 66 KVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR 125
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
DKSVW+WEV +E+ECVSVL H QDVK V WHP+ ++L S SYD+T+K++ E+ D
Sbjct: 126 DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE---D 182
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---DGY- 254
+W C T+ GH ST+W+L+F+ G +L SCSDD T++IW + + G G
Sbjct: 183 DWVCCATLE----GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSE 238
Query: 255 ASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
ASW+ +CT+SG+H RTI+ V W + G +A+ DD+++ F E P++ +
Sbjct: 239 ASWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVFEEDPGSDPQQPTFSLTAHV 298
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+AH DVN V W+P ER LLAS SDDG + W+
Sbjct: 299 PQAHSQDVNCVAWNPKERGLLASCSDDGELAFWK 332
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 84/243 (34%), Positives = 131/243 (53%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TLEGH + V S+AW P+ + A+CS DK+V +WE + C +VL H
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNL------LATCSRDKSVWVWEVDEEDEY-ECVSVLNS-H 149
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
T+ V+ W PS +LLA+AS+D T ++ + D+ C ATLEGHE+ V S++++ SG L
Sbjct: 150 TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRL 209
Query: 134 ATCGRDKSVWIW-EVMPGNE-----------FECVSVLQG-HAQDVKMVQWHPTMDVLFS 180
A+C D++V IW + +PGNE ++CV L G H++ + V W L +
Sbjct: 210 ASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLAT 269
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISES-NNGHSSTIWALSFNAKGDKLV-SCSDDLTI 238
D+ I+V+ ED SD +++ HS + +++N K L+ SCSDD +
Sbjct: 270 ACGDDAIRVF-EEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDDGEL 328
Query: 239 KIW 241
W
Sbjct: 329 AFW 331
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 90/291 (30%), Positives = 142/291 (48%)
Query: 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77
EGH V +AW P AS S D T IW+++ + C LE H V
Sbjct: 58 EGHQRTVRKVAWSPCGNY------LASASFDATTCIWKKNEDD--FECVTTLEG-HENEV 108
Query: 78 RSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+S AW+PSG LLAT S D + +WE D +YECV+ L H +VK V W+ S LLA+
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA---- 192
D +V ++ +++ C + L+GH V + + P+ L SCS D T+++W
Sbjct: 169 SYDDTVKLYREEE-DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227
Query: 193 -ED----TDSD-NWHCVQTISESNNGHSSTIWALSF-NAKGDKLVSCSDDLTIKIWGADI 245
E + S+ +W CV T+S HS TI+ +++ G +C DD I+++ D
Sbjct: 228 NEQGVACSGSEASWKCVCTLS---GFHSRTIYDVAWCQLTGTLATACGDD-AIRVFEEDP 283
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-RE-GIIASGAADDSVQFF 294
++ H + H + + V W+ +E G++AS + D + F+
Sbjct: 284 GSDPQQPTFSLTAH---VPQAHSQDVNCVAWNPKERGLLASCSDDGELAFW 331
Score = 225 (84.3 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 68/208 (32%), Positives = 98/208 (47%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
++ YE + L HT V + W P+ + AS S D TV+++ + W
Sbjct: 136 EEDEYEC--VSVLNSHTQDVKHVVWHPSQ------ELLASASYDDTVKLYREEEDD--WV 185
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV--GGD-----------YECV 111
C A LE H TV S A+ PSG+ LA+ S D T IW G + ++CV
Sbjct: 186 CCATLEG-HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCV 244
Query: 112 ATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVS-VLQGHA 163
TL G H + V+W +GTL CG D ++ ++E PG++ F + V Q H+
Sbjct: 245 CTLSGFHSRTIYDVAWCQLTGTLATACG-DDAIRVFEEDPGSDPQQPTFSLTAHVPQAHS 303
Query: 164 QDVKMVQWHPT-MDVLFSCSYDNTIKVW 190
QDV V W+P +L SCS D + W
Sbjct: 304 QDVNCVAWNPKERGLLASCSDDGELAFW 331
Score = 194 (73.4 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 55/153 (35%), Positives = 68/153 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQ-----------SASSRFWN 64
TLEGH VWSLA+ P+ ASCS D+TVRIW Q S S W
Sbjct: 189 TLEGHESTVWSLAFDPSG------QRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWK 242
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATA-SFDATTCIWEDVGGD-----YECVATL-EGH 117
C L H+RT+ AW LATA DA ED G D + A + + H
Sbjct: 243 CVCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVFEEDPGSDPQQPTFSLTAHVPQAH 302
Query: 118 ENEVKSVSWNASGT-LLATCGRDKSVWIWEVMP 149
+V V+WN LLA+C D + W+ P
Sbjct: 303 SQDVNCVAWNPKERGLLASCSDDGELAFWKYQP 335
Score = 151 (58.2 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 43/135 (31%), Positives = 68/135 (50%)
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
S W L++N G L SC D +++IWG + GD + LC G H RT+ V
Sbjct: 17 SRCWFLAWNPAGTLLASCGGDRSVRIWGRE------GDSWICKSVLC--EG-HQRTVRKV 67
Query: 275 HWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
WS G +AS + D + + +++DD ++ + E H+ +V SV W+P L
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNEDD------FECVTTLE-GHENEVKSVAWAPSGN-L 119
Query: 334 LASASDDGMIKIWEL 348
LA+ S D + +WE+
Sbjct: 120 LATCSRDKSVWVWEV 134
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 164/344 (47%), Positives = 220/344 (63%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
+L +Q L GH RVW W P D PV A+C DKT+RIW + R W K VL
Sbjct: 3 KLTLLQCLSGHRGRVWGAGWHPR---D---PVLATCGEDKTIRIWADDGTGR-WVPKTVL 55
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ HTRT+R AWSP G+ LA+ASFDAT IW+ G++EC ATLEGHENEVKSVSW+ S
Sbjct: 56 SDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKS 115
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
G LLATC RDKSVWIWEV +E+EC +VL H+QDVK V+WHP DVL S SYDNTI++
Sbjct: 116 GALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQL 175
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
+ + DSD W T++ H ST+W+++F+A G +L SCSDD T++IW +
Sbjct: 176 YREDLADSD-WSSFDTLAS----HDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGNE 230
Query: 250 SG----DGYAS-WRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLID 303
G DG W+ +CT+SG+H R ++ + W ++ G+IA+ DD V+ F E +
Sbjct: 231 FGVACPDGKTPVWKCVCTLSGFHSRAVYDISWCKKTGLIATACGDDMVRIFREVAGSPAN 290
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
P+++M+ K AH D N+V+WSP LL + SDDG +K+W+
Sbjct: 291 EPTFEMVASKH-AHSQDANTVEWSPTVAGLLVTTSDDGDVKLWK 333
Score = 212 (79.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 57/207 (27%), Positives = 93/207 (44%)
Query: 106 GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ-GHAQ 164
G + L GH V W+ +LATCG DK++ IW + +VL GH +
Sbjct: 2 GKLTLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTR 61
Query: 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224
++ V W P L S S+D T+ +W D S + C T+ GH + + ++S++
Sbjct: 62 TIRDVAWSPCGRFLASASFDATVAIW---DRRSGEFECNATLE----GHENEVKSVSWSK 114
Query: 225 KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REGIIA 283
G L +CS D ++ IW + D Y + H + + V W E ++A
Sbjct: 115 SGALLATCSRDKSVWIW-----EVAQEDEY----ECAAVLNTHSQDVKKVEWHPNEDVLA 165
Query: 284 SGAADDSVQFFVESKDDLIDGPSYKML 310
S + D+++Q + E D D S+ L
Sbjct: 166 SASYDNTIQLYREDLADS-DWSSFDTL 191
Score = 152 (58.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 47/146 (32%), Positives = 69/146 (47%)
Query: 205 TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS 264
T+ + +GH +W ++ + L +C +D TI+IW AD DG W +S
Sbjct: 5 TLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIW-AD-------DGTGRWVPKTVLS 56
Query: 265 GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323
H RTI V WS G +AS + D +V + D G ++ E H+ +V S
Sbjct: 57 DGHTRTIRDVAWSPCGRFLASASFDATVAIW-----DRRSG-EFECNATLE-GHENEVKS 109
Query: 324 VQWSPGERRLLASASDDGMIKIWELA 349
V WS LLA+ S D + IWE+A
Sbjct: 110 VSWSKSGA-LLATCSRDKSVWIWEVA 134
Score = 149 (57.5 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 53/159 (33%), Positives = 70/159 (44%)
Query: 46 SGDKTV-RIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV 104
S D TV I ++ SR +C +TVR G A D T +W+
Sbjct: 193 SHDSTVWSIAFDASGSRLASCS------DDQTVRIWQEYKPGNEFGVACPDGKTPVWK-- 244
Query: 105 GGDYECVATLEG-HENEVKSVSWNASGTLLAT-CGRDKSVWIWEVM--PGNE--FECVSV 158
CV TL G H V +SW L+AT CG D EV P NE FE V+
Sbjct: 245 -----CVCTLSGFHSRAVYDISWCKKTGLIATACGDDMVRIFREVAGSPANEPTFEMVAS 299
Query: 159 LQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTD 196
H+QD V+W PT+ +L + S D +K+W ED +
Sbjct: 300 KHAHSQDANTVEWSPTVAGLLVTTSDDGDVKLWKFEDDE 338
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 162/346 (46%), Positives = 220/346 (63%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G EL +Q L GH R W W P V A+C DKT+RIW + AS R W K
Sbjct: 2 GKLEL--LQCLTGHRGRAWGAGWHPKGNV------LATCGEDKTIRIWAEDASQR-WVAK 52
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
VL + H+RT+R AWSP G+ LA+ASFDAT IW+ G++EC ATLEGHENEVKSVSW
Sbjct: 53 TVLSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSW 112
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
+ SG+LLATC RDKSVW+WEV +E+EC +VL H QDVK V+WHP D+L S SYDNT
Sbjct: 113 SKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNT 172
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
IK++ + DSD W T+ H ST+W++SF+ G++L SCSDD T+KIW
Sbjct: 173 IKLYKEDLADSD-WSSFDTLVS----HESTVWSISFDGSGNRLASCSDDQTVKIWQEYKP 227
Query: 247 RMQSG----DGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDL 301
+ G D W+ +CT++GYH R+++ + W ++ G++A+ DD V+ F E +
Sbjct: 228 GNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFKEVEGSS 287
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
P+++M+ K AH DVN+V+W+P LL + SDDG +K+W+
Sbjct: 288 PHEPTFEMVGSKH-AHSQDVNTVEWNPTVVGLLVTTSDDGDVKLWK 332
Score = 148 (57.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 44/139 (31%), Positives = 65/139 (46%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH W ++ KG+ L +C +D TI+IW D ++ W +S H RTI
Sbjct: 12 GHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQR--------WVAKTVLSDGHSRTI 63
Query: 272 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
V WS G +AS + D +V + D G ++ E H+ +V SV WS
Sbjct: 64 RDVAWSPCGQYLASASFDATVAIW-----DKKSG-EFECNATLE-GHENEVKSVSWSKSG 116
Query: 331 RRLLASASDDGMIKIWELA 349
LLA+ S D + +WE+A
Sbjct: 117 S-LLATCSRDKSVWVWEVA 134
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 166/350 (47%), Positives = 230/350 (65%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G EL +QTL GH RVWS AW P G +FASC DKT+R+W +S + R W +
Sbjct: 2 GKLEL--LQTLTGHAGRVWSAAWHP-GG-----KLFASCGEDKTIRVWNKSDTDR-WVAQ 52
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
VL + HTRT+R AWS G LA+ASFD T +W+ G++EC ATLEGH+NEVKSV+W
Sbjct: 53 TVLTDGHTRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTW 112
Query: 127 NASGTLLATCGRDKSVWIWEV--MPG--NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182
+ SG LLATC RDKSVWIWE+ P +E+ECV+VL GH QDVK V WHP D+L S S
Sbjct: 113 SRSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASAS 172
Query: 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW- 241
YDNTI+++ + DS+ W ++ + ES HSST+W++SF+A G +L SCS+D T+K+W
Sbjct: 173 YDNTIRMYRQDLADSE-WEMLEPL-ES---HSSTVWSISFDATGQRLASCSEDTTVKVWQ 227
Query: 242 --GAD-ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVES 297
G D + D W+ +CT+SGYH R+++ + W ++ G++A+ DD+V+ F E+
Sbjct: 228 QYGPDNALGIPCPDRGTIWKCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIFREA 287
Query: 298 KDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
D + P++++++ E AH D N V W P LL +ASDDG IK+W+
Sbjct: 288 SDSDRNEPTFELVVTVE-AHSQDANKVAWHPTVPGLLLTASDDGEIKLWQ 336
Score = 238 (88.8 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 71/212 (33%), Positives = 99/212 (46%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC 65
+ YE + L GHT V + W P + AS S D T+R++ Q + W
Sbjct: 140 EDEYEC--VAVLNGHTQDVKKVCWHPQEDL------LASASYDNTIRMYRQDLADSEWEM 191
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-------------YECVA 112
LE H+ TV S ++ +G+ LA+ S D T +W+ G D ++CV
Sbjct: 192 LEPLES-HSSTVWSISFDATGQRLASCSEDTTVKVWQQYGPDNALGIPCPDRGTIWKCVC 250
Query: 113 TLEG-HENEVKSVSWNASGTLLAT-CGRDKSVWIW-EVMPG--NE--FECVSVLQGHAQD 165
TL G H V + W LLAT CG D +V I+ E NE FE V ++ H+QD
Sbjct: 251 TLSGYHSRSVYDIDWCKQTGLLATACG-DDTVRIFREASDSDRNEPTFELVVTVEAHSQD 309
Query: 166 VKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTD 196
V WHPT+ +L + S D IK+W D D
Sbjct: 310 ANKVAWHPTVPGLLLTASDDGEIKLWQYVDAD 341
Score = 169 (64.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 46/161 (28%), Positives = 70/161 (43%)
Query: 4 LDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR-- 61
L D +E+ ++ LE H+ VWS+++ D ASCS D TV++W+Q
Sbjct: 184 LADSEWEM--LEPLESHSSTVWSISF------DATGQRLASCSEDTTVKVWQQYGPDNAL 235
Query: 62 ---------FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD----- 107
W C L H+R+V W LLATA D T I+ +
Sbjct: 236 GIPCPDRGTIWKCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIFREASDSDRNEP 295
Query: 108 -YECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWE 146
+E V T+E H + V+W+ + LL T D + +W+
Sbjct: 296 TFELVVTVEAHSQDANKVAWHPTVPGLLLTASDDGEIKLWQ 336
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 42/138 (30%), Positives = 64/138 (46%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH+ +W+ +++ G SC +D TI++W T D W ++ H RTI
Sbjct: 12 GHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDT-----D---RWVAQTVLTDGHTRTI 63
Query: 272 FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ WS G +AS + D +V + D G ++ E HD +V SV WS
Sbjct: 64 RELAWSCCGHYLASASFDTTVAVW-----DKKSG-EFECNATLE-GHDNEVKSVTWSRSG 116
Query: 331 RRLLASASDDGMIKIWEL 348
LLA+ S D + IWE+
Sbjct: 117 N-LLATCSRDKSVWIWEI 133
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 165/338 (48%), Positives = 213/338 (63%)
Query: 13 EIQ-TLEGHTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
E+Q + H D R W +AW P AG A+C GD+ +RIW + S W CK VL
Sbjct: 6 ELQHRVSAHPDSRCWYVAWNP-AGT-----TLATCGGDRAIRIWGKEGDS--WECKCVLS 57
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H RTVR AWSP GK LA+ASFDATTCIW+ D+EC+ LEGHENEVK V+W SG
Sbjct: 58 DGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSG 117
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+LLATC RDKSVWIWEV +E+EC+SV+ H QDVK V WHPT ++L S SYDN I ++
Sbjct: 118 SLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIY 177
Query: 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250
ED D+W C T+ GH ST+W+L+F+ +G +L SCSDD T+KIW T S
Sbjct: 178 KEED---DDWECRATLE----GHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGS 230
Query: 251 GDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKM 309
D SW+ +CT+SG+H RTI+ + W R G +A+ DD V+ F E + P + +
Sbjct: 231 SD--ESWKCICTLSGFHGRTIYDIAWCRLTGALATACGDDGVRVFSEDPTADPEQPIFAL 288
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
KAH+ DVN V W+P E LLA+ SD+G IW+
Sbjct: 289 SAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIWK 326
Score = 200 (75.5 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 61/202 (30%), Positives = 92/202 (45%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
++ YE + + HT V + W PT + AS S D + I+++ W
Sbjct: 136 EEDEYEC--LSVVNSHTQDVKHVVWHPTQ------ELLASASYDNKICIYKEEDDD--WE 185
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGD------YECVATLEG- 116
C+A LE H TV S + P G+ LA+ S D T IW E GD ++C+ TL G
Sbjct: 186 CRATLEG-HESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDESWKCICTLSGF 244
Query: 117 HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNEFE----CVS--VLQGHAQDVKMV 169
H + ++W +G L CG D V ++ P + E +S V + H QDV V
Sbjct: 245 HGRTIYDIAWCRLTGALATACG-DDGVRVFSEDPTADPEQPIFALSAHVPKAHNQDVNCV 303
Query: 170 QWHPT-MDVLFSCSYDNTIKVW 190
W+P +L +CS + +W
Sbjct: 304 SWNPKEAGLLATCSDNGEFAIW 325
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 39/141 (27%), Positives = 66/141 (46%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH + + +++ G L +CS D ++ IW D D Y L ++ H + +
Sbjct: 103 GHENEVKCVAWAPSGSLLATCSRDKSVWIWEVD-----EEDEYEC---LSVVNS-HTQDV 153
Query: 272 FSVHWS-REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
V W + ++AS + D+ + + E DD + L+ H+ V S+ + P
Sbjct: 154 KHVVWHPTQELLASASYDNKICIYKEEDDDW----ECRATLE---GHESTVWSLTFDPEG 206
Query: 331 RRLLASASDDGMIKIWELANT 351
RRL AS SDD +KIW+ + T
Sbjct: 207 RRL-ASCSDDRTVKIWKESTT 226
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 162/334 (48%), Positives = 210/334 (62%)
Query: 20 HTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
H D R W LAW PT + ASC GD+ +RIW S W CK+VL E H RTVR
Sbjct: 14 HPDSRCWFLAWNPTG------TLLASCGGDRKIRIWGTEGDS--WICKSVLSEGHQRTVR 65
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
AWSP G LA+ASFDATTCIW+ D+ECV TLEGHENEVKSV+W SG LLATC R
Sbjct: 66 KVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR 125
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
DKSVW+WEV +E+ECVSVL H QDVK V WHP+ ++L S SYD+T+K++ E D
Sbjct: 126 DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE---GD 182
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA--- 255
+W C T+ GH ST+W+++F+ G +L SCSDD T++IW + + G +
Sbjct: 183 DWVCCATLE----GHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238
Query: 256 -SWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
SW+ +CT+SG+H RTI+ V W + G +A+ DD+++ F E P++ +
Sbjct: 239 PSWKCVCTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHL 298
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+AH DVN V W+P E LLAS SDDG + WE
Sbjct: 299 RQAHSQDVNCVAWNPKEAGLLASCSDDGEVAFWE 332
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 85/243 (34%), Positives = 131/243 (53%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TLEGH + V S+AW P+ + A+CS DK+V +WE + C +VL H
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNL------LATCSRDKSVWVWEVDEEDEY-ECVSVLNS-H 149
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
T+ V+ W PS +LLA+AS+D T ++++ G D+ C ATLEGHE+ V S++++ SG L
Sbjct: 150 TQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRL 209
Query: 134 ATCGRDKSVWIW-EVMPGNE-----------FECVSVLQG-HAQDVKMVQWHPTMDVLFS 180
A+C D++V IW + +PGNE ++CV L G H + + V W L +
Sbjct: 210 ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGALAT 269
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISES-NNGHSSTIWALSFNAK-GDKLVSCSDDLTI 238
D+ I+V+ ED SD +++ HS + +++N K L SCSDD +
Sbjct: 270 ACGDDAIRVF-EEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSDDGEV 328
Query: 239 KIW 241
W
Sbjct: 329 AFW 331
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 93/291 (31%), Positives = 144/291 (49%)
Query: 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77
EGH V +AW P AS S D T IW+++ + C LE H V
Sbjct: 58 EGHQRTVRKVAWSPCGNY------LASASFDATTCIWKKNQDD--FECVTTLEG-HENEV 108
Query: 78 RSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+S AW+PSG LLAT S D + +WE D +YECV+ L H +VK V W+ S LLA+
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA---- 192
D +V +++ G+++ C + L+GH V + + P+ L SCS D T+++W
Sbjct: 169 SYDDTVKLYQE-EGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPG 227
Query: 193 -ED----TDSD-NWHCVQTISESNNGHSSTIWALSF-NAKGDKLVSCSDDLTIKIWGADI 245
E + SD +W CV T+S H+ TI+ +++ G +C DD I+++ D
Sbjct: 228 NEQGVACSGSDPSWKCVCTLS---GFHTRTIYDVAWCQLTGALATACGDD-AIRVFEEDP 283
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-RE-GIIASGAADDSVQFF 294
++ HL H + + V W+ +E G++AS + D V F+
Sbjct: 284 GSDPQQPTFSLTAHLRQA---HSQDVNCVAWNPKEAGLLASCSDDGEVAFW 331
Score = 227 (85.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 68/208 (32%), Positives = 98/208 (47%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
++ YE + L HT V + W P+ + AS S D TV+++++ W
Sbjct: 136 EEDEYEC--VSVLNSHTQDVKHVVWHPSQ------ELLASASYDDTVKLYQEEGDD--WV 185
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV-----------GGD--YECV 111
C A LE H TV S A+ PSG+ LA+ S D T IW G D ++CV
Sbjct: 186 CCATLEG-HESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCV 244
Query: 112 ATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVL-QGHA 163
TL G H + V+W +G L CG D ++ ++E PG++ F + L Q H+
Sbjct: 245 CTLSGFHTRTIYDVAWCQLTGALATACG-DDAIRVFEEDPGSDPQQPTFSLTAHLRQAHS 303
Query: 164 QDVKMVQWHPT-MDVLFSCSYDNTIKVW 190
QDV V W+P +L SCS D + W
Sbjct: 304 QDVNCVAWNPKEAGLLASCSDDGEVAFW 331
Score = 200 (75.5 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 57/150 (38%), Positives = 67/150 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQ-----------SASSRFWN 64
TLEGH VWS+A+ P+ ASCS D+TVRIW Q S S W
Sbjct: 189 TLEGHESTVWSIAFDPSG------QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATA-SFDATTCIWEDVGGD-----YECVATL-EGH 117
C L HTRT+ AW LATA DA ED G D + A L + H
Sbjct: 243 CVCTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAH 302
Query: 118 ENEVKSVSWNASGT-LLATCGRDKSVWIWE 146
+V V+WN LLA+C D V WE
Sbjct: 303 SQDVNCVAWNPKEAGLLASCSDDGEVAFWE 332
Score = 153 (58.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 44/135 (32%), Positives = 67/135 (49%)
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
S W L++N G L SC D I+IWG + GD SW +S H RT+ V
Sbjct: 17 SRCWFLAWNPTGTLLASCGGDRKIRIWGTE------GD---SWICKSVLSEGHQRTVRKV 67
Query: 275 HWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
WS G +AS + D + + +++DD ++ + E H+ +V SV W+P L
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNQDD------FECVTTLE-GHENEVKSVAWAPSGN-L 119
Query: 334 LASASDDGMIKIWEL 348
LA+ S D + +WE+
Sbjct: 120 LATCSRDKSVWVWEV 134
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 162/334 (48%), Positives = 213/334 (63%)
Query: 20 HTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
H D R W LAW P AG + ASC GD+ +RIW S W CK+VL E H RTVR
Sbjct: 14 HPDSRCWFLAWNP-AGT-----LLASCGGDRRIRIWGTEGDS--WICKSVLSEGHQRTVR 65
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
AWSP G LA+ASFDATTCIW+ D+ECV TLEGHENEVKSV+W SG LLATC R
Sbjct: 66 KVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR 125
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
DKSVW+WEV +E+ECVSVL H QDVK V WHP+ ++L S SYD+T+K++ E+ D
Sbjct: 126 DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE---D 182
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA--- 255
+W C T+ GH ST+W+L+F+ G +L SCSDD T++IW + + G +
Sbjct: 183 DWVCCATLE----GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238
Query: 256 -SWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
SW+ +CT+SG+H RTI+ + W + G +A+ DD+++ F E + P++ +
Sbjct: 239 PSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHL 298
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+AH DVN V W+P E LLAS SDDG + W+
Sbjct: 299 HQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 82/243 (33%), Positives = 133/243 (54%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TLEGH + V S+AW P+ + A+CS DK+V +WE + C +VL H
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNL------LATCSRDKSVWVWEVDEEDEY-ECVSVLNS-H 149
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
T+ V+ W PS +LLA+AS+D T ++ + D+ C ATLEGHE+ V S++++ SG L
Sbjct: 150 TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRL 209
Query: 134 ATCGRDKSVWIW-EVMPGNE-----------FECVSVLQG-HAQDVKMVQWHPTMDVLFS 180
A+C D++V IW + +PGNE ++C+ L G H++ + + W L +
Sbjct: 210 ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT 269
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISES-NNGHSSTIWALSFNAKGDKLV-SCSDDLTI 238
D+ I+V+ ED +SD +++ + HS + +++N K L+ SCSDD +
Sbjct: 270 ACGDDAIRVF-QEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
Query: 239 KIW 241
W
Sbjct: 329 AFW 331
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 92/291 (31%), Positives = 142/291 (48%)
Query: 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77
EGH V +AW P AS S D T IW+++ + C LE H V
Sbjct: 58 EGHQRTVRKVAWSPCGNY------LASASFDATTCIWKKNQDD--FECVTTLEG-HENEV 108
Query: 78 RSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+S AW+PSG LLAT S D + +WE D +YECV+ L H +VK V W+ S LLA+
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA---- 192
D +V ++ +++ C + L+GH V + + P+ L SCS D T+++W
Sbjct: 169 SYDDTVKLYREEE-DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227
Query: 193 -ED----TDSD-NWHCVQTISESNNGHSSTIWALSF-NAKGDKLVSCSDDLTIKIWGADI 245
E + SD +W C+ T+S HS TI+ +++ G +C DD I+++ D
Sbjct: 228 NEQGVACSGSDPSWKCICTLS---GFHSRTIYDIAWCQLTGALATACGDD-AIRVFQEDP 283
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-RE-GIIASGAADDSVQFF 294
++ HL H + + V W+ +E G++AS + D V F+
Sbjct: 284 NSDPQQPTFSLTAHLHQA---HSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 213 (80.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 64/208 (30%), Positives = 96/208 (46%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
++ YE + L HT V + W P+ + AS S D TV+++ + W
Sbjct: 136 EEDEYEC--VSVLNSHTQDVKHVVWHPSQ------ELLASASYDDTVKLYREEEDD--WV 185
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV-----------GGD--YECV 111
C A LE H TV S A+ PSG+ LA+ S D T IW G D ++C+
Sbjct: 186 CCATLEG-HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244
Query: 112 ATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVL-QGHA 163
TL G H + ++W +G L CG D ++ +++ P ++ F + L Q H+
Sbjct: 245 CTLSGFHSRTIYDIAWCQLTGALATACG-DDAIRVFQEDPNSDPQQPTFSLTAHLHQAHS 303
Query: 164 QDVKMVQWHPTMD-VLFSCSYDNTIKVW 190
QDV V W+P +L SCS D + W
Sbjct: 304 QDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 187 (70.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 55/150 (36%), Positives = 66/150 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQ-----------SASSRFWN 64
TLEGH VWSLA+ P+ ASCS D+TVRIW Q S S W
Sbjct: 189 TLEGHESTVWSLAFDPSG------QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATA-SFDATTCIWEDVGGD-----YECVATL-EGH 117
C L H+RT+ AW LATA DA ED D + A L + H
Sbjct: 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH 302
Query: 118 ENEVKSVSWNASGT-LLATCGRDKSVWIWE 146
+V V+WN LLA+C D V W+
Sbjct: 303 SQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332
Score = 153 (58.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 44/135 (32%), Positives = 67/135 (49%)
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
S W L++N G L SC D I+IWG + GD SW +S H RT+ V
Sbjct: 17 SRCWFLAWNPAGTLLASCGGDRRIRIWGTE------GD---SWICKSVLSEGHQRTVRKV 67
Query: 275 HWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
WS G +AS + D + + +++DD ++ + E H+ +V SV W+P L
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNQDD------FECVTTLE-GHENEVKSVAWAPSGN-L 119
Query: 334 LASASDDGMIKIWEL 348
LA+ S D + +WE+
Sbjct: 120 LATCSRDKSVWVWEV 134
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 161/334 (48%), Positives = 210/334 (62%)
Query: 20 HTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
H D R W LAW P+ + ASC GD+ +RIW S W CK+VL E H RTVR
Sbjct: 14 HPDSRCWFLAWNPSG------TLLASCGGDRKIRIWGTEGDS--WICKSVLSEGHQRTVR 65
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
AWSP G LA+ASFDATTCIW+ D+ECV TLEGHENEVKSV+W SG LLATC R
Sbjct: 66 KVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR 125
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
DKSVW+WEV +E+ECVSVL H QDVK V WHP+ ++L S SYD+T+K++ E D
Sbjct: 126 DKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE---GD 182
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA--- 255
+W C T+ GH ST+W+++F+ G +L SCSDD T++IW + + G +
Sbjct: 183 DWVCCATLE----GHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238
Query: 256 -SWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
SW+ +CT+SG+H RTI+ V W + G +A+ DD+++ F E P++ +
Sbjct: 239 PSWKCICTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHL 298
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+AH DVN V W+P E LLAS SDDG + WE
Sbjct: 299 RQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWE 332
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 84/243 (34%), Positives = 132/243 (54%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TLEGH + V S+AW P+ + A+CS DK+V +WE + C +VL H
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNL------LATCSRDKSVWVWEVDEEDEY-ECVSVLSS-H 149
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
T+ V+ W PS +LLA+AS+D T ++++ G D+ C ATLEGHE+ V S++++ SG L
Sbjct: 150 TQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRL 209
Query: 134 ATCGRDKSVWIW-EVMPGNE-----------FECVSVLQG-HAQDVKMVQWHPTMDVLFS 180
A+C D++V IW + +PGNE ++C+ L G H + + V W L +
Sbjct: 210 ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGALAT 269
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISES-NNGHSSTIWALSFNAKGDKLV-SCSDDLTI 238
D+ I+V+ ED SD +++ HS + +++N K L+ SCSDD +
Sbjct: 270 ACGDDAIRVF-EEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
Query: 239 KIW 241
W
Sbjct: 329 AFW 331
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 92/291 (31%), Positives = 144/291 (49%)
Query: 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77
EGH V +AW P AS S D T IW+++ + C LE H V
Sbjct: 58 EGHQRTVRKVAWSPCGNY------LASASFDATTCIWKKNQDD--FECVTTLEG-HENEV 108
Query: 78 RSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+S AW+PSG LLAT S D + +WE D +YECV+ L H +VK V W+ S LLA+
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASA 168
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA---- 192
D +V +++ G+++ C + L+GH V + + P+ L SCS D T+++W
Sbjct: 169 SYDDTVKLYQE-EGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPG 227
Query: 193 -ED----TDSD-NWHCVQTISESNNGHSSTIWALSF-NAKGDKLVSCSDDLTIKIWGADI 245
E + SD +W C+ T+S H+ TI+ +++ G +C DD I+++ D
Sbjct: 228 NEQGVACSGSDPSWKCICTLS---GFHTRTIYDVAWCQLTGALATACGDD-AIRVFEEDP 283
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-RE-GIIASGAADDSVQFF 294
++ HL H + + V W+ +E G++AS + D V F+
Sbjct: 284 GSDPQQPTFSLTAHLRQA---HSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 225 (84.3 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 67/208 (32%), Positives = 98/208 (47%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
++ YE + L HT V + W P+ + AS S D TV+++++ W
Sbjct: 136 EEDEYEC--VSVLSSHTQDVKHVVWHPSQ------ELLASASYDDTVKLYQEEGDD--WV 185
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV-----------GGD--YECV 111
C A LE H TV S A+ PSG+ LA+ S D T IW G D ++C+
Sbjct: 186 CCATLEG-HESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244
Query: 112 ATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVL-QGHA 163
TL G H + V+W +G L CG D ++ ++E PG++ F + L Q H+
Sbjct: 245 CTLSGFHTRTIYDVAWCQLTGALATACG-DDAIRVFEEDPGSDPQQPTFSLTAHLRQAHS 303
Query: 164 QDVKMVQWHPTMD-VLFSCSYDNTIKVW 190
QDV V W+P +L SCS D + W
Sbjct: 304 QDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 198 (74.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 57/150 (38%), Positives = 67/150 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQ-----------SASSRFWN 64
TLEGH VWS+A+ P+ ASCS D+TVRIW Q S S W
Sbjct: 189 TLEGHESTVWSIAFDPSG------QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATA-SFDATTCIWEDVGGD-----YECVATL-EGH 117
C L HTRT+ AW LATA DA ED G D + A L + H
Sbjct: 243 CICTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAH 302
Query: 118 ENEVKSVSWNASGT-LLATCGRDKSVWIWE 146
+V V+WN LLA+C D V WE
Sbjct: 303 SQDVNCVAWNPKEPGLLASCSDDGEVAFWE 332
Score = 154 (59.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 44/135 (32%), Positives = 67/135 (49%)
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
S W L++N G L SC D I+IWG + GD SW +S H RT+ V
Sbjct: 17 SRCWFLAWNPSGTLLASCGGDRKIRIWGTE------GD---SWICKSVLSEGHQRTVRKV 67
Query: 275 HWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
WS G +AS + D + + +++DD ++ + E H+ +V SV W+P L
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNQDD------FECVTTLE-GHENEVKSVAWAPSGN-L 119
Query: 334 LASASDDGMIKIWEL 348
LA+ S D + +WE+
Sbjct: 120 LATCSRDKSVWVWEV 134
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 158/336 (47%), Positives = 214/336 (63%)
Query: 14 IQTLEGHTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
+ + H D R W LAW P+ + ASC GD+T+RIW + + W CK+VL E
Sbjct: 8 LSRVSAHPDSRCWFLAWNPSG------TLLASCGGDRTIRIWGKDGDN--WVCKSVLGEG 59
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H RTVR +WSP G LA+ASFDATTCIW ++EC+ TLEGHENEVKSV+W SG+L
Sbjct: 60 HQRTVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSL 119
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LATC RDKSVW+WEV E+ECVSVL H QDVK V WHP ++L S SYD+++K++
Sbjct: 120 LATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYRE 179
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
E+ D+W C T+ GH+ST+W+L+F+ G++L +CSDD T++IW T Q
Sbjct: 180 EE---DDWVCCATLE----GHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSK 232
Query: 253 GYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESK-DDLIDGPSYKML 310
+W+ +CT++GYH RT++ V+W+ G IA+ DD+V+ F E D + P++ +
Sbjct: 233 SDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDAVRIFEEDPGSDPLQ-PTFSLT 291
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+AH DVN V W P E LLAS SDDG + W
Sbjct: 292 AHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFW 327
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 80/244 (32%), Positives = 129/244 (52%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
E I TLEGH + V S+AW P+ + A+CS DK+V +WE + C +VL
Sbjct: 94 EFECITTLEGHENEVKSVAWAPSGSL------LATCSRDKSVWVWEVDEEEEY-ECVSVL 146
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
HT+ V+ W P+ +LLA+AS+D + ++ + D+ C ATLEGH + V S++++ +
Sbjct: 147 NS-HTQDVKHVVWHPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQT 205
Query: 130 GTLLATCGRDKSVWIWEVMPGNE--------FECVSVLQG-HAQDVKMVQW-HPTMDVLF 179
G LATC DK+V IW + E ++CV L G H + V V W H T +
Sbjct: 206 GEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIAT 265
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTIS-ESNNGHSSTIWALSFNAKGDKLV-SCSDDLT 237
+C D+ ++++ ED SD +++ H+ + ++++ K L+ SCSDD
Sbjct: 266 ACG-DDAVRIF-EEDPGSDPLQPTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGE 323
Query: 238 IKIW 241
+ W
Sbjct: 324 MAFW 327
Score = 234 (87.4 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 69/203 (33%), Positives = 97/203 (47%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC 65
D E + L HT V + W P + AS S D +V+++ + W C
Sbjct: 135 DEEEEYECVSVLNSHTQDVKHVVWHPNQ------ELLASASYDDSVKLYREEEDD--WVC 186
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG-GD--------YECVATLEG 116
A LE HT TV S A+ +G+ LAT S D T IW +G G+ ++CV TL G
Sbjct: 187 CATLEG-HTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTG 245
Query: 117 -HENEVKSVSWN-ASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVL-QGHAQDVKM 168
H V V+WN +G + CG D +V I+E PG++ F + + + H QDV
Sbjct: 246 YHTRTVYDVNWNHLTGAIATACG-DDAVRIFEEDPGSDPLQPTFSLTAHMPRAHTQDVNC 304
Query: 169 VQWHPTM-DVLFSCSYDNTIKVW 190
V WHP ++L SCS D + W
Sbjct: 305 VTWHPKEPNLLASCSDDGEMAFW 327
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 159/336 (47%), Positives = 204/336 (60%)
Query: 14 IQTLEGHTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
+Q H D R W +AW P + ASC GD+ +RIW + S W CK VL++
Sbjct: 8 LQKFNAHPDSRCWYVAWNPKG------TLLASCGGDRAIRIWGREGDS--WECKTVLQDG 59
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H R VR AWSP G LA+ASFDATTCIW+ D+EC+ LEGHENEVK V+W SG
Sbjct: 60 HQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQ 119
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LATC RDKSVWIWEV +E+ECVSV+ H QDVK V WHPT ++L SCSYDN + V+
Sbjct: 120 LATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKE 179
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
ED D+W C T+ GH+ST+W L+F+ G +L SCSDD T+KIW Q G
Sbjct: 180 ED---DDWECRATLE----GHTSTVWGLTFDPSGQRLASCSDDRTVKIW----KECQPGG 228
Query: 253 GY-ASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
G +W+ +CT+SG+H RT++ + W G +A+ DD V+ F E + D P + +
Sbjct: 229 GQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPVFSLS 288
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
KAH DVN + W P E LL S SD+G I +W
Sbjct: 289 AHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIAVW 324
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 80/242 (33%), Positives = 128/242 (52%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
N + + LEGH + V +AW P+ A+CS DK+V IWE + C +
Sbjct: 92 NDDFECLTVLEGHENEVKCVAWAPSGNQ------LATCSRDKSVWIWEVDEEDEY-ECVS 144
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
V+ HT+ V+ W P+ +LLA+ S+D C++++ D+EC ATLEGH + V ++++
Sbjct: 145 VVNS-HTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFD 203
Query: 128 ASGTLLATCGRDKSVWIW-EVMPGN----EFECVSVLQG-HAQDVKMVQWHPTMDVLFSC 181
SG LA+C D++V IW E PG ++CV L G H + V + W P L +
Sbjct: 204 PSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATA 263
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISES-NNGHSSTIWALSFNAK-GDKLVSCSDDLTIK 239
D+ ++V+ ED +D V ++S HS + ++++ K LVSCSD+ I
Sbjct: 264 CGDDGVRVF-KEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIA 322
Query: 240 IW 241
+W
Sbjct: 323 VW 324
Score = 231 (86.4 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 66/201 (32%), Positives = 96/201 (47%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
++ YE + + HT V + W PT + ASCS D V ++++ W
Sbjct: 136 EEDEYEC--VSVVNSHTQDVKHVVWHPTQ------ELLASCSYDNNVCVYKEEDDD--WE 185
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV---GGD---YECVATLEG-H 117
C+A LE HT TV + PSG+ LA+ S D T IW++ GG ++CV TL G H
Sbjct: 186 CRATLEG-HTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFH 244
Query: 118 ENEVKSVSW-NASGTLLATCGRDKSVWIWE----VMPGNEFECVS--VLQGHAQDVKMVQ 170
V ++W +G L CG D V +++ P +S V + H+QDV +
Sbjct: 245 GRTVYDIAWCPLTGALATACG-DDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIA 303
Query: 171 WHPT-MDVLFSCSYDNTIKVW 190
WHP +L SCS + I VW
Sbjct: 304 WHPKEAGLLVSCSDNGEIAVW 324
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 43/139 (30%), Positives = 64/139 (46%)
Query: 211 NGH-SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 269
N H S W +++N KG L SC D I+IWG + GD SW + H R
Sbjct: 12 NAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGRE------GD---SWECKTVLQDGHQR 62
Query: 270 TIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329
+ V WS G + A+ D+ + K+D ++ L E H+ +V V W+P
Sbjct: 63 AVRKVAWSPCGNYLASASFDATTCIWKKKND-----DFECLTVLE-GHENEVKCVAWAPS 116
Query: 330 ERRLLASASDDGMIKIWEL 348
+L A+ S D + IWE+
Sbjct: 117 GNQL-ATCSRDKSVWIWEV 134
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 155/337 (45%), Positives = 209/337 (62%)
Query: 17 LEGHTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
+ H D R W LAW P AG + ASC GD++VRIW + S W CK+VL E H R
Sbjct: 11 IPAHPDSRCWFLAWNP-AGT-----LLASCGGDRSVRIWGREGDS--WICKSVLCEGHQR 62
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
TVR AWSP G LA+ASFDATTCIW+ D+ECV TLEGHENEVKSV+W SG LLAT
Sbjct: 63 TVRKVAWSPCGNYLASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWAPSGNLLAT 122
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
C RDKSVW+WE N+ + + Q +K V WHP+ ++L S SYD+T+K++ E+
Sbjct: 123 CSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTVKLYREEE- 181
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG---D 252
D+W C T+ GH ST+W+L+F+ G +L SCSDD T++IW + + G +
Sbjct: 182 --DDWVCCATLE----GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACN 235
Query: 253 GY-ASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
G SW+ +CT+SG+H RTI+ V W + G +A+ DD+++ F E P++ +
Sbjct: 236 GSDPSWKCICTLSGFHSRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLT 295
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+AH DVN V W+P E+ LLAS SDDG + W+
Sbjct: 296 AHLPQAHSQDVNCVAWNPKEQGLLASCSDDGELAFWK 332
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 78/243 (32%), Positives = 130/243 (53%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TLEGH + V S+AW P+ + A+CS DK+V +WE + ++ + V
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNL------LATCSRDKSVWVWEGTVENQPSDPTRV--PYK 149
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
++++ W PS +LLA+AS+D T ++ + D+ C ATLEGHE+ V S++++ SG L
Sbjct: 150 PQSMKKVLWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRL 209
Query: 134 ATCGRDKSVWIW-EVMPGNE-----------FECVSVLQG-HAQDVKMVQWHPTMDVLFS 180
A+C D++V IW + +PGNE ++C+ L G H++ + V W L +
Sbjct: 210 ASCSDDRTVRIWRQYLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALAT 269
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISES-NNGHSSTIWALSFNAKGDKLV-SCSDDLTI 238
D+ I+V+ ED SD +++ HS + +++N K L+ SCSDD +
Sbjct: 270 ACGDDAIRVF-EEDPGSDPQQPTFSLTAHLPQAHSQDVNCVAWNPKEQGLLASCSDDGEL 328
Query: 239 KIW 241
W
Sbjct: 329 AFW 331
Score = 192 (72.6 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 55/153 (35%), Positives = 68/153 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQ-----------SASSRFWN 64
TLEGH VWSLA+ P+ ASCS D+TVRIW Q + S W
Sbjct: 189 TLEGHESTVWSLAFDPSG------QRLASCSDDRTVRIWRQYLPGNEQGVACNGSDPSWK 242
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATA-SFDATTCIWEDVGGD-----YECVATL-EGH 117
C L H+RT+ AW LATA DA ED G D + A L + H
Sbjct: 243 CICTLSGFHSRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLPQAH 302
Query: 118 ENEVKSVSWNASGT-LLATCGRDKSVWIWEVMP 149
+V V+WN LLA+C D + W+ P
Sbjct: 303 SQDVNCVAWNPKEQGLLASCSDDGELAFWKYQP 335
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/345 (44%), Positives = 214/345 (62%)
Query: 9 YELREIQTL--EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
Y L+ I ++ E D+VW+LAW P + A+C+ DK ++IW + + + W
Sbjct: 10 YNLKLIDSMQKEAPYDKVWNLAWHPNG------EILATCANDKYIQIWSKDTNGK-WGLV 62
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYEC--VATLEGHENEVKSV 124
LE H +TVR AWSP G+ LA ASFDA+T IWE + E V++LEGH EVKSV
Sbjct: 63 QSLEG-HEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSV 121
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD 184
+W+++GTLLATC RDKS+WIW++ N+FEC+S+ GH QD+K V WHP ++L S SYD
Sbjct: 122 AWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYD 181
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
+TIK W +D D D W C+ T++ GH S+IW L+FN GDKLVSC +D + W D
Sbjct: 182 DTIKFW--KDIDGD-WECINTLT----GHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFD 234
Query: 245 ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLID 303
+ + W ++ + R I+S+ WS I +G+ADDS+ F+ + DD D
Sbjct: 235 ----KENE---KWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIFYEQESDDTPD 287
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
YK++LKK+ AHD DVN +W+P + +LAS DDG IKIWEL
Sbjct: 288 --KYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWEL 330
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 81/297 (27%), Positives = 145/297 (48%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC 65
D N + +Q+LEGH V +AW P A S D + IWE+S +
Sbjct: 54 DTNGKWGLVQSLEGHEKTVRRVAWSPCGRF------LAGASFDASTSIWEKSKDELEFTH 107
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSV 124
+ LE HT V+S AW +G LLAT S D + IW+ + D+EC++ GH ++K V
Sbjct: 108 VSSLEG-HTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCV 166
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD 184
W+ + LLA+ D ++ W+ + G ++EC++ L GH + + ++ D L SC D
Sbjct: 167 LWHPNEELLASSSYDDTIKFWKDIDG-DWECINTLTGHESSIWDLAFNKDGDKLVSCGED 225
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
+ ++W D +++ W I + N +S I+++ +++ + +V+ S D +I +
Sbjct: 226 KLV-LFWKFDKENEKWI---NIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIFY--- 278
Query: 245 ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQFFVESKD 299
+S D ++ + HD + W+ + I+AS D ++ + E +D
Sbjct: 279 --EQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIW-ELQD 332
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
+ T +D ++ S +W L+++ G+ L +C++D I+IW D
Sbjct: 3 DTTKNDKYNLKLIDSMQKEAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDTN------ 56
Query: 253 GYASWRHLCTISGYHDRTIFSVHWSREGIIASGAA-DDSVQFFVESKDDLIDGPSYKMLL 311
W + ++ G H++T+ V WS G +GA+ D S + +SKD+L + +
Sbjct: 57 --GKWGLVQSLEG-HEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDEL----EFTHVS 109
Query: 312 KKEKAHDMDVNSVQW-SPGERRLLASASDDGMIKIWEL 348
E H +V SV W S G LLA+ S D I IW++
Sbjct: 110 SLE-GHTYEVKSVAWDSTGT--LLATCSRDKSIWIWQM 144
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 143/300 (47%), Positives = 194/300 (64%)
Query: 51 VRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYEC 110
+RIW +++ S W CK++L E HTRT+RS AWSP G LA+ SFDAT CIW GD+EC
Sbjct: 22 IRIWAKNSDSDQWTCKSILTEGHTRTIRSVAWSPCGNYLASCSFDATICIWSKKDGDFEC 81
Query: 111 VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE-VMPGNEFECVSVLQGHAQDVKMV 169
+ATLEGHENEVK V+W++SG LA+C RDKS WIWE + E+EC SVL H+QDVK V
Sbjct: 82 MATLEGHENEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHV 141
Query: 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229
W P + L S SYDNTIK++ ++ D D+W C T+ GH ST+W+LSF++ G+
Sbjct: 142 VWSPKENALVSASYDNTIKIY--KEVD-DDWECSHTLI----GHESTVWSLSFHSSGELF 194
Query: 230 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAAD 288
VSC DD +KIW ++SG W +CTI+GYH+R I+ V WS+ IA+ D
Sbjct: 195 VSCGDDKVLKIWKC----LKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACGD 250
Query: 289 DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
D+++ F + I + + + +AH+ DVN V+W P +LAS SDD IKIW++
Sbjct: 251 DAIRIFSIVRIT-ISISNQLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCIKIWKV 309
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 87/299 (29%), Positives = 141/299 (47%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
D + + I T EGHT + S+AW P ASCS D T+ IW + +
Sbjct: 30 DSDQWTCKSILT-EGHTRTIRSVAWSPCGNY------LASCSFDATICIWSKKDGD--FE 80
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD--YECVATLEGHENEVK 122
C A LE H V+ WS SG LA+ S D + IWE + D YEC + L H +VK
Sbjct: 81 CMATLEG-HENEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVK 139
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182
V W+ L + D ++ I++ + +++EC L GH V + +H + ++ SC
Sbjct: 140 HVVWSPKENALVSASYDNTIKIYKEVD-DDWECSHTLIGHESTVWSLSFHSSGELFVSCG 198
Query: 183 YDNTIKVWWA-EDTDSD-NWHCVQTISESNNGHSSTIWALSFNAKGDKLVS-CSDDLTIK 239
D +K+W + SD W + TI+ H+ I+ + ++ +K+ + C DD I+
Sbjct: 199 DDKVLKIWKCLKSGPSDVKWISICTIA---GYHNRPIYDVDWSKLNNKIATACGDD-AIR 254
Query: 240 IWGADITRMQSGDGYASWRHLCTISGY--HDRTIFSVHWSR--EGIIASGAADDSVQFF 294
I+ I R+ L I+ Y H+ + V W + I+ASG+ D+ ++ +
Sbjct: 255 IFS--IVRITISIS----NQLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCIKIW 307
Score = 130 (50.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE--QSASSRF-WNCKAVLEEM 72
TL GH VWSL++ ++G +F SC DK ++IW+ +S S W +
Sbjct: 174 TLIGHESTVWSLSFH-SSG-----ELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGY 227
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWE------DVGGDYECVATLEGHENEVKSVSW 126
H R + WS +ATA D I+ + +A + H ++V V W
Sbjct: 228 HNRPIYDVDWSKLNNKIATACGDDAIRIFSIVRITISISNQLLFIAYYQAHNHDVNVVRW 287
Query: 127 NAS-GTLLATCGRDKSVWIWEVMPGN 151
+ +LA+ D + IW+V N
Sbjct: 288 HPKVDNILASGSDDNCIKIWKVHSNN 313
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 131/293 (44%), Positives = 176/293 (60%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
++ ++ LEGH DRVW++AW P+ + ASC GDK++R+W S W CK+VL
Sbjct: 2 KMSKLSDLEGHEDRVWNVAWNPSG------TILASCGGDKSIRLWGLEGGS--WVCKSVL 53
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H RTVR +WS G+ LA++SFD TTCIW +E ATLEGHENEVK+ W+ S
Sbjct: 54 LDGHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPS 113
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
G LATC RDK+VWIWEV EFEC SV H+QDVK V WHP D L S SYDNTI+
Sbjct: 114 GRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIR- 172
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIKIWGADITRM 248
++ E+ D +W C T+ + H+ST+W LSF + +L SC+ D ++ +WG
Sbjct: 173 FFCEEVD--DWQCYCTLDK----HASTVWGLSFGPGPEPQLASCAADGSVYVWGT----- 221
Query: 249 QSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDD 300
GD SW LC H R ++ V W R G +A+ D++V+ FV+ D
Sbjct: 222 -KGDR-RSWE-LCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGGD 271
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 81/253 (32%), Positives = 125/253 (49%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
AS S D T IW + + F +C A LE H V++C WSPSG+ LAT S D T IWE
Sbjct: 74 ASSSFDGTTCIWRRQDDT-FESC-ATLEG-HENEVKACGWSPSGRFLATCSRDKTVWIWE 130
Query: 103 DVGGD--YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW--EVMPGNEFECVSV 158
VG D +EC + H +VK V W+ LA+ D ++ + EV ++++C
Sbjct: 131 -VGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEV---DDWQCYCT 186
Query: 159 LQGHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
L HA V + + P + L SC+ D ++ VW + D +W T+ H +
Sbjct: 187 LDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKG-DRRSWELCGTLER----HPRPV 241
Query: 218 WALSF-NAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHW 276
+ +S+ +G +C D+ ++++ D GD SWR CT++ H + + SV W
Sbjct: 242 YDVSWCRTRGFLATACGDN-AVRVFVKD-----GGD--CSWRLGCTLTQAHSQDVNSVSW 293
Query: 277 SREGIIASGAADD 289
S G + + A DD
Sbjct: 294 SPSGGLLASAGDD 306
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 69/231 (29%), Positives = 112/231 (48%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TLEGH + V + W P+ A+CS DKTV IWE F C +V + H++
Sbjct: 97 TLEGHENEVKACGWSPSGRF------LATCSRDKTVWIWEVGEDEEF-ECASV-QTCHSQ 148
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLA 134
V+ W P LA+AS+D T + + D++C TL+ H + V +S+ LA
Sbjct: 149 DVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQLA 208
Query: 135 TCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193
+C D SV++W +E L+ H + V V W T L + DN ++V+ +
Sbjct: 209 SCAADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVF-VK 267
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
D +W T++++ HS + ++S++ G L S DD +++W D
Sbjct: 268 DGGDCSWRLGCTLTQA---HSQDVNSVSWSPSGGLLASAGDDGYVRLWQID 315
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 55/153 (35%), Positives = 83/153 (54%)
Query: 198 DNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIKIWGADITRMQSGDGYAS 256
D+W C T+ + H+ST+W LSF + +L SC+ D ++ +WG GD S
Sbjct: 179 DDWQCYCTLDK----HASTVWGLSFGPGPEPQLASCAADGSVYVWGT------KGDR-RS 227
Query: 257 WRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK 315
W LC H R ++ V W R G +A+ D++V+ FV+ D S+++ +
Sbjct: 228 WE-LCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGGDC----SWRLGCTLTQ 282
Query: 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
AH DVNSV WSP LLASA DDG +++W++
Sbjct: 283 AHSQDVNSVSWSPSGG-LLASAGDDGYVRLWQI 314
Score = 187 (70.9 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 58/194 (29%), Positives = 90/194 (46%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
+D +E +QT H+ V + W P D +A S S D T+R + + W
Sbjct: 133 EDEEFECASVQTC--HSQDVKKVLWHPDR--DELA----SASYDNTIRFFCEEVDD--WQ 182
Query: 65 CKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGG--DYECVATLEGHENEV 121
C L++ H TV ++ P + LA+ + D + +W G +E TLE H V
Sbjct: 183 CYCTLDK-HASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPV 241
Query: 122 KSVSWNASGTLLAT-CGRDKSVWIWEVMPGNEFE----CVSVLQGHAQDVKMVQWHPTMD 176
VSW + LAT CG D +V ++ V G + C ++ Q H+QDV V W P+
Sbjct: 242 YDVSWCRTRGFLATACG-DNAVRVF-VKDGGDCSWRLGC-TLTQAHSQDVNSVSWSPSGG 298
Query: 177 VLFSCSYDNTIKVW 190
+L S D +++W
Sbjct: 299 LLASAGDDGYVRLW 312
Score = 149 (57.5 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 40/137 (29%), Positives = 63/137 (45%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH +W +++N G L SC D +I++WG ++ G SW + H RT+
Sbjct: 11 GHEDRVWNVAWNPSGTILASCGGDKSIRLWG-----LEGG----SWVCKSVLLDGHQRTV 61
Query: 272 FSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331
V WS G + ++ D +DD + S L + H+ +V + WSP R
Sbjct: 62 RGVSWSNCGRYLASSSFDGTTCIWRRQDDTFE--SCATL----EGHENEVKACGWSPSGR 115
Query: 332 RLLASASDDGMIKIWEL 348
LA+ S D + IWE+
Sbjct: 116 -FLATCSRDKTVWIWEV 131
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 140/363 (38%), Positives = 198/363 (54%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+RE+Q L+ R+WSL+W V S D+ +++W + + + W L
Sbjct: 4 VREVQKLKASNKRLWSLSWNHKGSV------LISSGEDRVIKLWAK-CNDQLWGSSFSLP 56
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECVATLEGHENEVKSVSW 126
E H +++R WSP G +A+ASFD T IW+ + E + +LEGH +EVK V+W
Sbjct: 57 EAHKKSIRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAW 116
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
SG L+ATCGRDKSVW+WE + +CVSVLQ H+QDVK V WHP +VL S SYDN
Sbjct: 117 CPSGHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYDNK 176
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
I V+ E D+W T+ +GH ST+W F+ GD L SCSDDL +K+W +
Sbjct: 177 INVYREE---LDDW----TVFAQLSGHDSTVWKAEFSPSGDILASCSDDLCVKLWSWEGV 229
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDL--ID 303
+S +SW + T+SGYH RTIF ++WS + ++AS +D+ + + + L I
Sbjct: 230 CGKS----SSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDNRLCIYKMPANGLTHIG 285
Query: 304 G-PSYKM--LL--KKEKAHDMDVNSVQWSPGE-------------RRLLASASDDGMIKI 345
G P ++ +L AH DVN V+W PG L +ASDDG IK
Sbjct: 286 GKPCFEEPPVLWGHVPNAHSEDVNCVRWKPGNITDISHSESISNCHLFLTTASDDGYIKF 345
Query: 346 WEL 348
W +
Sbjct: 346 WSI 348
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 58/186 (31%), Positives = 98/186 (52%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
E+ + +LEGHT V +AW P+ + A+C DK+V +WE C +VL
Sbjct: 97 EMEALVSLEGHTSEVKCVAWCPSGHL------IATCGRDKSVWLWEFDDEEDV-QCVSVL 149
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H++ V+S AW P G++L + S+D ++ + D+ A L GH++ V ++ S
Sbjct: 150 QP-HSQDVKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPS 208
Query: 130 GTLLATCGRDKSV--WIWEVMPG--NEFECVSVLQG-HAQDVKMVQWHPTMDVLFSCSYD 184
G +LA+C D V W WE + G + + C++ L G H + + + W P +L SC D
Sbjct: 209 GDILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSD 268
Query: 185 NTIKVW 190
N + ++
Sbjct: 269 NRLCIY 274
Score = 183 (69.5 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 62/202 (30%), Positives = 91/202 (45%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC 65
D +++ + L+ H+ V S+AW P V S S D + ++ + W
Sbjct: 138 DDEEDVQCVSVLQPHSQDVKSVAWHPHG------EVLVSTSYDNKINVYREELDD--WTV 189
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW--EDVGG---DYECVATLEG-HEN 119
A L H TV +SPSG +LA+ S D +W E V G + C+ATL G H
Sbjct: 190 FAQLSG-HDSTVWKAEFSPSGDILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTR 248
Query: 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE---------FECVSVLQGH-----AQD 165
+ ++W+ LLA+CG D + I++ MP N FE VL GH ++D
Sbjct: 249 TIFDLNWSPDSQLLASCGSDNRLCIYK-MPANGLTHIGGKPCFEEPPVLWGHVPNAHSED 307
Query: 166 VKMVQWHP--TMDVLFSCSYDN 185
V V+W P D+ S S N
Sbjct: 308 VNCVRWKPGNITDISHSESISN 329
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 131/359 (36%), Positives = 203/359 (56%)
Query: 2 EFLDD--GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS 59
EFL+ G +L I T+ GHT R+WS+A P + P+FA+ S DK+VRI+ +
Sbjct: 269 EFLNQLYGPRKLDTITTISGHTGRLWSVAAHP------MLPLFATSSQDKSVRIY----N 318
Query: 60 SRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHE 118
S +N V++ HTR++R AW P + +LA ASFD+ I E + D+EC A LEGHE
Sbjct: 319 SNTYNLVHVIDGFHTRSIRRVAWRPIERPVLAVASFDSVVSINEKIDDDWECTAALEGHE 378
Query: 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
NEVK ++W+ +G LATC RDKSVWIWE +EF+C++VLQ H QDVK+V WHPT D+L
Sbjct: 379 NEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLL 438
Query: 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTI 238
S SYDN+I W D D D+W ++ GH++T+WAL+F+ G+ L S +D +
Sbjct: 439 VSGSYDNSICFW--RD-DGDDW----ALTCQLQGHTNTVWALAFSPNGNTLASADNDGNV 491
Query: 239 KIW-----GADITRMQSGDGYA-----SWRHLCTISGYHDRTIFSVHWSREGIIASGAAD 288
+W D+ + S + W+ ++ H ++++ W + + S D
Sbjct: 492 FLWIKISSNEDVATIDSTNILRPALQEEWKQQTSLPHIHKGAVYTISWMNDATLCSAGGD 551
Query: 289 DSVQFFVESKDDLIDGPSYKMLLKKEKAHDM-DVNSVQWSPGERRLLASASDDGMIKIW 346
+ + K D + + +++ AH + ++NS+++ +R L S DDG ++W
Sbjct: 552 GKIVVYQREKHD---EALWHVAYEQDHAHGVYEINSLEYLRDDR--LLSGGDDGECRVW 605
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 126/336 (37%), Positives = 187/336 (55%)
Query: 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIW----EQSASSRFWNCKAVLEEMHTRT 76
T RVW W G + ASC DK VR+W E + R C+ L++ HTR
Sbjct: 17 TSRVWMTCWH-----HG-GRILASCGDDKAVRVWSLVGEPDSKMRL-ECRTTLDDSHTRA 69
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
VRS A+S GK L +ASFDA+ +++ G++ V LEGHE+EVK ++ S LATC
Sbjct: 70 VRSVAFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATC 129
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
RDKSVW W+ +F S+LQ H QDVK V WHPT D+L SCSYD++I+ + D
Sbjct: 130 SRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFY---RFD 186
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS 256
++W Q I + H T+W+++F+ +G +LV+ +D I+++ + +S D +
Sbjct: 187 GEDWVTQQKI---DGCHVGTVWSIAFDTEGHRLVTVGEDHCIQLFVRENIGSKSAD-QDT 242
Query: 257 WRHLCTISGYHDR-TIFSVHW-SREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKE 314
W+ + + R ++SV W S +IA+G D ++ F S + P + L
Sbjct: 243 WKSVARYDVENTRWPLYSVAWNSTNDVIATGGGDCKIRLFKISSTP--ESPVIEHLGVVG 300
Query: 315 KAHDMDVNSVQWSPGER--RLLASASDDGMIKIWEL 348
+ H++DVN V W+P + LL SASDDG I++WEL
Sbjct: 301 R-HELDVNHVAWNPNPKFSNLLTSASDDGTIRLWEL 335
Score = 226 (84.6 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 77/294 (26%), Positives = 140/294 (47%)
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-----YECVATLE-GHENEVKS 123
E+ T V W G++LA+ D +W VG EC TL+ H V+S
Sbjct: 13 EKDDTSRVWMTCWHHGGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRS 72
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
V+++ G L + D SV +++ G EF V+ L+GH +VK + + + L +CS
Sbjct: 73 VAFSNDGKCLVSASFDASVVVYQQEDG-EFAEVNKLEGHESEVKCAVFSKSDEFLATCSR 131
Query: 184 DNTIKVW-WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242
D + VW W +D D D V +I + H+ + ++++ D LVSCS D +I+ +
Sbjct: 132 DKS--VWFWQQDEDED--FSVSSILQP---HTQDVKQVAWHPTEDLLVSCSYDSSIRFYR 184
Query: 243 ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESK-- 298
D G+ + + + I G H T++S+ + EG ++ G D +Q FV
Sbjct: 185 FD------GEDWVTQQK---IDGCHVGTVWSIAFDTEGHRLVTVGE-DHCIQLFVRENIG 234
Query: 299 DDLIDGPSYKMLLKKEKAHDM-DVNSVQWSPGERRLLASASDDGMIKIWELANT 351
D ++K + + + + + SV W+ ++A+ D I+++++++T
Sbjct: 235 SKSADQDTWKSVARYDVENTRWPLYSVAWN-STNDVIATGGGDCKIRLFKISST 287
Score = 177 (67.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 65/253 (25%), Positives = 115/253 (45%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
+DG E E+ LEGH V + + D A+CS DK+V W+Q F +
Sbjct: 97 EDG--EFAEVNKLEGHESEVKCAVFSKS---D---EFLATCSRDKSVWFWQQDEDEDF-S 147
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG-HENEVKS 123
++L+ HT+ V+ AW P+ LL + S+D++ + G D+ ++G H V S
Sbjct: 148 VSSILQP-HTQDVKQVAWHPTEDLLVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWS 206
Query: 124 VSWNASGTLLATCGRDKSVWIW--EVMPGNEFE---CVSVLQGHAQDVKM----VQWHPT 174
++++ G L T G D + ++ E + + SV + ++ + V W+ T
Sbjct: 207 IAFDTEGHRLVTVGEDHCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNST 266
Query: 175 MDVLFSCSYDNTIKVWWAEDT-DSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSC 232
DV+ + D I+++ T +S + + + W + N K + L S
Sbjct: 267 NDVIATGGGDCKIRLFKISSTPESPVIEHLGVVGRHELDVNHVAW--NPNPKFSNLLTSA 324
Query: 233 SDDLTIKIWGADI 245
SDD TI++W +I
Sbjct: 325 SDDGTIRLWELEI 337
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 126/336 (37%), Positives = 187/336 (55%)
Query: 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIW----EQSASSRFWNCKAVLEEMHTRT 76
T RVW W G + ASC DK VR+W E + R C+ L++ HTR
Sbjct: 17 TSRVWMTCWH-----HG-GRILASCGDDKAVRVWSLVGEPDSKMRL-ECRTTLDDSHTRA 69
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
VRS A+S GK L +ASFDA+ +++ G++ V LEGHE+EVK ++ S LATC
Sbjct: 70 VRSVAFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATC 129
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
RDKSVW W+ +F S+LQ H QDVK V WHPT D+L SCSYD++I+ + D
Sbjct: 130 SRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFY---RFD 186
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS 256
++W Q I + H T+W+++F+ +G +LV+ +D I+++ + +S D +
Sbjct: 187 GEDWVTQQKI---DGCHVGTVWSIAFDTEGHRLVTVGEDHCIQLFVRENIGSKSAD-QDT 242
Query: 257 WRHLCTISGYHDR-TIFSVHW-SREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKE 314
W+ + + R ++SV W S +IA+G D ++ F S + P + L
Sbjct: 243 WKSVARYDVENTRWPLYSVAWNSTNDVIATGGGDCKIRLFKISSTP--ESPVIEHLGVVG 300
Query: 315 KAHDMDVNSVQWSPGER--RLLASASDDGMIKIWEL 348
+ H++DVN V W+P + LL SASDDG I++WEL
Sbjct: 301 R-HELDVNHVAWNPNPKFSNLLTSASDDGTIRLWEL 335
Score = 226 (84.6 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 77/294 (26%), Positives = 140/294 (47%)
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-----YECVATLE-GHENEVKS 123
E+ T V W G++LA+ D +W VG EC TL+ H V+S
Sbjct: 13 EKDDTSRVWMTCWHHGGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRS 72
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
V+++ G L + D SV +++ G EF V+ L+GH +VK + + + L +CS
Sbjct: 73 VAFSNDGKCLVSASFDASVVVYQQEDG-EFAEVNKLEGHESEVKCAVFSKSDEFLATCSR 131
Query: 184 DNTIKVW-WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242
D + VW W +D D D V +I + H+ + ++++ D LVSCS D +I+ +
Sbjct: 132 DKS--VWFWQQDEDED--FSVSSILQP---HTQDVKQVAWHPTEDLLVSCSYDSSIRFYR 184
Query: 243 ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESK-- 298
D G+ + + + I G H T++S+ + EG ++ G D +Q FV
Sbjct: 185 FD------GEDWVTQQK---IDGCHVGTVWSIAFDTEGHRLVTVGE-DHCIQLFVRENIG 234
Query: 299 DDLIDGPSYKMLLKKEKAHDM-DVNSVQWSPGERRLLASASDDGMIKIWELANT 351
D ++K + + + + + SV W+ ++A+ D I+++++++T
Sbjct: 235 SKSADQDTWKSVARYDVENTRWPLYSVAWN-STNDVIATGGGDCKIRLFKISST 287
Score = 177 (67.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 65/253 (25%), Positives = 115/253 (45%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
+DG E E+ LEGH V + + D A+CS DK+V W+Q F +
Sbjct: 97 EDG--EFAEVNKLEGHESEVKCAVFSKS---D---EFLATCSRDKSVWFWQQDEDEDF-S 147
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG-HENEVKS 123
++L+ HT+ V+ AW P+ LL + S+D++ + G D+ ++G H V S
Sbjct: 148 VSSILQP-HTQDVKQVAWHPTEDLLVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWS 206
Query: 124 VSWNASGTLLATCGRDKSVWIW--EVMPGNEFE---CVSVLQGHAQDVKM----VQWHPT 174
++++ G L T G D + ++ E + + SV + ++ + V W+ T
Sbjct: 207 IAFDTEGHRLVTVGEDHCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNST 266
Query: 175 MDVLFSCSYDNTIKVWWAEDT-DSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSC 232
DV+ + D I+++ T +S + + + W + N K + L S
Sbjct: 267 NDVIATGGGDCKIRLFKISSTPESPVIEHLGVVGRHELDVNHVAW--NPNPKFSNLLTSA 324
Query: 233 SDDLTIKIWGADI 245
SDD TI++W +I
Sbjct: 325 SDDGTIRLWELEI 337
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 126/346 (36%), Positives = 190/346 (54%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM- 72
I++L+ + +++WS + G+ A+ S D+ +++ S + VL+E
Sbjct: 7 IKSLKLYKEKIWSFDFS-----QGI---LATGSTDRKIKL--VSVKYDDFTLIDVLDETA 56
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIW---EDVGGDYEC--VATLEGHENEVKSVSWN 127
H + +RS AW P LLA SFD+T IW E +E +A +EGHENEVK V+W+
Sbjct: 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWS 116
Query: 128 ASGTLLATCGRDKSVWIWEV-MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
G LATC RDKSVWIWE G E+EC+SVLQ H+QDVK V WHP+ +L S SYD+T
Sbjct: 117 NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDT 176
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN-AKGD-KLVSCSDDLTIKIWGAD 244
+++W +D D D+W CV + NGH T+W+ F+ +G +L S SDD T+++W
Sbjct: 177 VRIW--KDYD-DDWECVAVL----NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY- 228
Query: 245 ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDG 304
D W + H R +++V W G+IAS AD + + E +DG
Sbjct: 229 --MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEE-----VDG 281
Query: 305 PSYKMLLKKEKAHDM-DVNSVQWSP-GERRLLASASDDGMIKIWEL 348
+K+ K+ H + ++N V+W + +LA+ DDG++ W L
Sbjct: 282 -EWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 90/305 (29%), Positives = 144/305 (47%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIW--EQSASSRF-WN 64
++ L ++ H + S+AW+P + A+ S D TV IW E+SA F +
Sbjct: 45 DFTLIDVLDETAHKKAIRSVAWRPHTSL------LAAGSFDSTVSIWAKEESADRTFEMD 98
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE--DVGGDYECVATLEGHENEVK 122
A++E H V+ AWS G LAT S D + IWE + G +YEC++ L+ H +VK
Sbjct: 99 LLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK 157
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182
V W+ S LLA+ D +V IW+ +++ECV+VL GH V + T V CS
Sbjct: 158 HVIWHPSEALLASSSYDDTVRIWKDYD-DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216
Query: 183 Y--DNTIKVW--WAEDTDSDN-WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237
D+T++VW +D D W C + + H ++ +++ G + S D
Sbjct: 217 GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDV---HKRQVYNVAWGFNG-LIASVGADGV 272
Query: 238 IKIWGADITRMQSGDGYASW-----RHLCTISGYHDRTIFSVHW---SREGIIASGAADD 289
+ ++ + DG W R LC G ++ + V W + + I+A+G D
Sbjct: 273 LAVY-------EEVDG--EWKVFAKRALC--HGVYEINV--VKWLELNGKTILATGGDDG 319
Query: 290 SVQFF 294
V F+
Sbjct: 320 IVNFW 324
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 77/249 (30%), Positives = 120/249 (48%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC 65
D +E+ + +EGH + V +AW DG A+CS DK+V IWE S + C
Sbjct: 92 DRTFEMDLLAIIEGHENEVKGVAWSN----DGY--YLATCSRDKSVWIWETDESGEEYEC 145
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
+VL+E H++ V+ W PS LLA++S+D T IW+D D+ECVA L GHE V S
Sbjct: 146 ISVLQE-HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD 204
Query: 126 WNASGTLLATC-GRDKS-VWIWEVMPGNEFE-----CVSVLQG-HAQDVKMVQWHPTMDV 177
++ + + C G D S V +W+ M +E + C ++L H + V V W +
Sbjct: 205 FDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-GL 263
Query: 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI--WALSFNAKGDKLVSCSDD 235
+ S D + V+ E+ D + W + + + + W L N K L + DD
Sbjct: 264 IASVGADGVLAVY--EEVDGE-WKVFAKRALCHGVYEINVVKW-LELNGK-TILATGGDD 318
Query: 236 LTIKIWGAD 244
+ W +
Sbjct: 319 GIVNFWSLE 327
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 55/202 (27%), Positives = 92/202 (45%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
D+ E I L+ H+ V + W P+ + AS S D TVRIW+ W
Sbjct: 137 DESGEEYECISVLQEHSQDVKHVIWHPSEAL------LASSSYDDTVRIWKDYDDD--WE 188
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKL--LATASFDATTCIWEDVGGDYE------CVATL-E 115
C AVL H TV S + + + L + S D+T +W+ +G D + C A L +
Sbjct: 189 CVAVLNG-HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD 247
Query: 116 GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN--EFECVSVLQGHAQDVKMVQWHP 173
H+ +V +V+W +G L+A+ G D + ++E + G F ++ G ++ +V+W
Sbjct: 248 VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHG-VYEINVVKWLE 305
Query: 174 T--MDVLFSCSYDNTIKVWWAE 193
+L + D + W E
Sbjct: 306 LNGKTILATGGDDGIVNFWSLE 327
>UNIPROTKB|H9L0T1 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0071817 "MMXD complex" evidence=IEA] [GO:0097361 "CIA complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104486 OMA:EEEYECV EMBL:AADN02064069
ProteinModelPortal:H9L0T1 Ensembl:ENSGALT00000028398 Uniprot:H9L0T1
Length = 225
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 99/228 (43%), Positives = 139/228 (60%)
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+LLATC RDKSVW+W+V E+ECVSVL H QDVK V WHP ++L S SYD+T+K++
Sbjct: 1 SLLATCSRDKSVWVWDVDDEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDTVKLY 60
Query: 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250
E+ D+W C T+ GH ST+W+++F+ G++L SCSDD T++IW R +
Sbjct: 61 HEEE---DDWVCCATLE----GHESTVWSVAFDGSGERLASCSDDKTVRIW--QCYRPGN 111
Query: 251 GDGYA------SWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLID 303
+G A +W+ +C +SGYH RTI+ V W R G +A+ DD+++ F ES
Sbjct: 112 EEGVACSGTDPTWKCVCNLSGYHTRTIYDVSWCRLTGALATACGDDAIRVFEESTSSSPQ 171
Query: 304 G----PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
P++ + +AH DVN V W+P E LLAS SDDG I W+
Sbjct: 172 QQQQQPTFSLTAHVPRAHSQDVNCVAWNPKEPGLLASCSDDGEIAFWK 219
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 62/170 (36%), Positives = 94/170 (55%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ A+CS DK+V +W+ + C +VL HT+ V+ W P+ +LLA+AS+D T +
Sbjct: 2 LLATCSRDKSVWVWDVDDEEEY-ECVSVLNS-HTQDVKHVVWHPNQELLASASYDDTVKL 59
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM-PGNE------- 152
+ + D+ C ATLEGHE+ V SV+++ SG LA+C DK+V IW+ PGNE
Sbjct: 60 YHEEEDDWVCCATLEGHESTVWSVAFDGSGERLASCSDDKTVRIWQCYRPGNEEGVACSG 119
Query: 153 ----FECVSVLQG-HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS 197
++CV L G H + + V W L + D+ I+V+ E T S
Sbjct: 120 TDPTWKCVCNLSGYHTRTIYDVSWCRLTGALATACGDDAIRVF-EESTSS 168
Score = 189 (71.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 68/212 (32%), Positives = 93/212 (43%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
D+ YE + L HT V + W P + AS S D TV+++ + W
Sbjct: 19 DEEEYEC--VSVLNSHTQDVKHVVWHPNQ------ELLASASYDDTVKLYHEEEDD--WV 68
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW--------EDV---GGD--YECV 111
C A LE H TV S A+ SG+ LA+ S D T IW E V G D ++CV
Sbjct: 69 CCATLEG-HESTVWSVAFDGSGERLASCSDDKTVRIWQCYRPGNEEGVACSGTDPTWKCV 127
Query: 112 ATLEG-HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE---------FECVS-VL 159
L G H + VSW +G L CG D ++ ++E + F + V
Sbjct: 128 CNLSGYHTRTIYDVSWCRLTGALATACG-DDAIRVFEESTSSSPQQQQQQPTFSLTAHVP 186
Query: 160 QGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVW 190
+ H+QDV V W+P +L SCS D I W
Sbjct: 187 RAHSQDVNCVAWNPKEPGLLASCSDDGEIAFW 218
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 304 (112.1 bits), Expect = 1.6e-37, Sum P(3) = 1.6e-37
Identities = 63/134 (47%), Positives = 83/134 (61%)
Query: 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150
T +F A ED ++ L+GH++EVKSVSW+ASG LLATC RDKS+WIWE +
Sbjct: 119 TKNFGAEEDREEDEDDEWRFAVLLDGHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLED 178
Query: 151 --NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
N FE V+V+Q H DVK V WHP + L S SYD+TI++W ED D +W V I
Sbjct: 179 GDNNFETVAVMQEHEGDVKCVAWHPAEECLASGSYDDTIRIW-REDID--DWGQVACIK- 234
Query: 209 SNNGHSSTIWALSF 222
GH+ T+W + +
Sbjct: 235 ---GHTGTVWGIDW 245
Score = 171 (65.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 62/240 (25%), Positives = 107/240 (44%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE--QSASSRF 62
+D + E R L+GH V S++W +G+ + A+CS DK++ IWE + + F
Sbjct: 130 EDEDDEWRFAVLLDGHDSEVKSVSWS-ASGM-----LLATCSRDKSIWIWEDLEDGDNNF 183
Query: 63 WNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLEGHENEV 121
AV++E H V+ AW P+ + LA+ S+D T IW ED+ D+ VA ++GH V
Sbjct: 184 -ETVAVMQE-HEGDVKCVAWHPAEECLASGSYDDTIRIWREDID-DWGQVACIKGHTGTV 240
Query: 122 KSVSWNAS------GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175
+ W + T G+++ W + G S H Q V++ + P
Sbjct: 241 WGIDWEDAENVPFPSTSNGVSGQEEEWKTWHALSGPRLVSCS----HDQSVRVWRRQPKA 296
Query: 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235
L + + + TD + W + + H I+A++++ + L S D
Sbjct: 297 Q-LNTAGASSIPSIIRPSGTD-ETWEEDVVLPHA---HELPIYAVAWSRRTGLLASVGAD 351
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 58/199 (29%), Positives = 90/199 (45%)
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF--NAKGDKL 229
HPT+ ++ +CS D T++V+ N+ + TIS GH +I ++ N G+ +
Sbjct: 36 HPTLPLVATCSSDKTVRVY-----SLVNFRLLSTIS---GGHKRSIRTCAWKPNVSGESV 87
Query: 230 VSC-SDDLTIKIW------GADITRMQSG--------------DGYASWRHLCTISGYHD 268
++ S D T+ IW G + T Q D WR + G HD
Sbjct: 88 LATGSFDATVGIWRRWDDYGEEETLAQGNKNTKNFGAEEDREEDEDDEWRFAVLLDG-HD 146
Query: 269 RTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327
+ SV WS G ++A+ + D S+ + +DL DG + + + H+ DV V W
Sbjct: 147 SEVKSVSWSASGMLLATCSRDKSIWIW----EDLEDGDNNFETVAVMQEHEGDVKCVAWH 202
Query: 328 PGERRLLASASDDGMIKIW 346
P E LAS S D I+IW
Sbjct: 203 PAEE-CLASGSYDDTIRIW 220
Score = 142 (55.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 40/103 (38%), Positives = 58/103 (56%)
Query: 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCA 81
+R W A PT P+ A+CS DKTVR++ S + + + H R++R+CA
Sbjct: 28 ERTWLTAPHPTL------PLVATCSSDKTVRVY----SLVNFRLLSTISGGHKRSIRTCA 77
Query: 82 WSP--SGK-LLATASFDATTCIWE--DVGGDYECVATLEGHEN 119
W P SG+ +LAT SFDAT IW D G+ E +A +G++N
Sbjct: 78 WKPNVSGESVLATGSFDATVGIWRRWDDYGEEETLA--QGNKN 118
Score = 110 (43.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
E+ + D W + +GH S + ++S++A G L +CS D +I IW D+ + GD
Sbjct: 129 EEDEDDEWRFAVLL----DGHDSEVKSVSWSASGMLLATCSRDKSIWIW-EDL---EDGD 180
Query: 253 GYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSVQFFVESKDDLIDGPSYKMLL 311
++ + + H+ + V W E +ASG+ DD+++ + ++D+ D +
Sbjct: 181 N--NFETVAVMQE-HEGDVKCVAWHPAEECLASGSYDDTIRIW---REDIDDWGQVACI- 233
Query: 312 KKEKAHDMDVNSVQWSPGERRLLASASD--DGMIKIWELANTL 352
K H V + W E S S+ G + W+ + L
Sbjct: 234 ---KGHTGTVWGIDWEDAENVPFPSTSNGVSGQEEEWKTWHAL 273
Score = 98 (39.6 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 42/161 (26%), Positives = 66/161 (40%)
Query: 154 ECVSVLQGHAQDVKMVQWHPTMDVL--FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNN 211
EC++ G D + W +D +C +T VW + D++N T S +
Sbjct: 206 ECLA--SGSYDDTIRI-WREDIDDWGQVACIKGHTGTVWGIDWEDAENVPFPST-SNGVS 261
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIW-----------GAD----ITRMQSGDGYAS 256
G W G +LVSCS D ++++W GA I R D +
Sbjct: 262 GQEEE-WKTWHALSGPRLVSCSHDQSVRVWRRQPKAQLNTAGASSIPSIIRPSGTD--ET 318
Query: 257 WRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVE 296
W + H+ I++V WSR G++AS AD + + E
Sbjct: 319 WEEDVVLPHAHELPIYAVAWSRRTGLLASVGADGRLVVYEE 359
Score = 63 (27.2 bits), Expect = 1.6e-37, Sum P(3) = 1.6e-37
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 12 REIQTLEG-HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQ 56
R + T+ G H + + AWKP V G + V A+ S D TV IW +
Sbjct: 60 RLLSTISGGHKRSIRTCAWKPN--VSGES-VLATGSFDATVGIWRR 102
Score = 62 (26.9 bits), Expect = 1.6e-37, Sum P(3) = 1.6e-37
Identities = 35/157 (22%), Positives = 67/157 (42%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSF-NAKGDKLVSCSDDLTIKIWGADITRMQSGDGY 254
D D+W V I GH+ T+W + + +A+ S S+ ++ G + + +
Sbjct: 223 DIDDWGQVACIK----GHTGTVWGIDWEDAENVPFPSTSNGVS----GQE-------EEW 267
Query: 255 ASWRHLC---TISGYHDRTIFSVHWSREGIIASGAAD-DSVQFFVESKDDLIDGPSYKML 310
+W L +S HD+++ V W R+ A S+ + +++
Sbjct: 268 KTWHALSGPRLVSCSHDQSV-RV-WRRQPKAQLNTAGASSIPSIIRPSGT---DETWEED 322
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+ AH++ + +V WS LLAS DG + ++E
Sbjct: 323 VVLPHAHELPIYAVAWSR-RTGLLASVGADGRLVVYE 358
Score = 55 (24.4 bits), Expect = 8.6e-37, Sum P(3) = 8.6e-37
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 316 AHDM-DVNSVQWSP-------G--ERRLLASASDDGMIKIWEL 348
AH + ++N V W+ G E +L + +DDG IK+W L
Sbjct: 402 AHGIYEINHVAWAKRADRGRDGNKEEEVLITTADDGSIKVWTL 444
Score = 44 (20.5 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 223 NAKGDKLVSCSDDLTIKIW 241
N + + L++ +DD +IK+W
Sbjct: 424 NKEEEVLITTADDGSIKVW 442
>CGD|CAL0000383 [details] [associations]
symbol:orf19.4293 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 98/265 (36%), Positives = 141/265 (53%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN--EFECVSVLQGHAQ 164
++ +A +EGHENEVK+V WN G LA+C RDKSVWIWE P EFECV+VL H+Q
Sbjct: 126 EWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDHSQ 185
Query: 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224
DVK V WHP+M++L S SYD+TI+++ +D D W CV + NGH T+W F +
Sbjct: 186 DVKNVSWHPSMNILASSSYDDTIRIY-QQDIAGDEWSCVGIL----NGHEGTVWCSKFES 240
Query: 225 K----GD----KLVSCSDDLTIKIWGADITRMQSGDGYA------SWRHLCTISGYHDRT 270
D +LVS SDDL+++IW A R Q + A S RH + +
Sbjct: 241 LKSPIADSSVLRLVSASDDLSVRIWVAK--REQEDEEQAKLELPSSIRHTNEMVWEVESV 298
Query: 271 IFSVHWSREGIIASGAADDSVQFFVESKDDLI--DGPSYKMLLKK--EKAHDM-DVNSVQ 325
+ SVH +A A + ++ + K ++ E AH + ++N V
Sbjct: 299 LPSVHKYPVYSVAWSALTGKIASAGSDGKIVVYSETEKGKWVIDSIHEGAHGVHEINCVI 358
Query: 326 WSP--GERRLLASASDDGMIKIWEL 348
W+ E +L SA DDG + +W++
Sbjct: 359 WAQLDDENEILVSAGDDGYVNLWKI 383
Score = 210 (79.0 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 70/272 (25%), Positives = 126/272 (46%)
Query: 32 TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLL 89
+ V P+ A+ S DK+ ++++ SA +F A LE+ H R++RS A+ P G
Sbjct: 17 SVSVHPTLPIIATASTDKSTKLYKLSARQKF-PLVAKLEDTHKRSIRSVAFKPPLGGADT 75
Query: 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149
+ F + G ++ ++ G + V ++ + K + P
Sbjct: 76 PKSDFLDLPAL---AAGSFDSTISVWGIDEP--DVEYDIEEVI----ANQKEIL---TSP 123
Query: 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209
NE+ +++++GH +VK V W+ L SCS D ++ +W + + + CV +
Sbjct: 124 NNEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVL--- 180
Query: 210 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 269
N HS + +S++ + L S S D TI+I+ DI +GD W + ++G H+
Sbjct: 181 -NDHSQDVKNVSWHPSMNILASSSYDDTIRIYQQDI----AGD---EWSCVGILNG-HEG 231
Query: 270 TIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
T++ S+ + S AD SV V + DDL
Sbjct: 232 TVWC---SKFESLKSPIADSSVLRLVSASDDL 260
Score = 186 (70.5 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS- 60
E L N E + +EGH + V ++ W G ASCS DK+V IWE +
Sbjct: 118 EILTSPNNEWNLMAIIEGHENEVKAVDWN----FQG--QYLASCSRDKSVWIWETDPETL 171
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGD-YECVATLEGHE 118
+ C AVL + H++ V++ +W PS +LA++S+D T I++ D+ GD + CV L GHE
Sbjct: 172 EEFECVAVLND-HSQDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHE 230
Query: 119 NEV--------KSVSWNASGTLLATCGRDKSVWIW 145
V KS ++S L + D SV IW
Sbjct: 231 GTVWCSKFESLKSPIADSSVLRLVSASDDLSVRIW 265
>UNIPROTKB|Q5AG86 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 98/265 (36%), Positives = 141/265 (53%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN--EFECVSVLQGHAQ 164
++ +A +EGHENEVK+V WN G LA+C RDKSVWIWE P EFECV+VL H+Q
Sbjct: 126 EWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDHSQ 185
Query: 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224
DVK V WHP+M++L S SYD+TI+++ +D D W CV + NGH T+W F +
Sbjct: 186 DVKNVSWHPSMNILASSSYDDTIRIY-QQDIAGDEWSCVGIL----NGHEGTVWCSKFES 240
Query: 225 K----GD----KLVSCSDDLTIKIWGADITRMQSGDGYA------SWRHLCTISGYHDRT 270
D +LVS SDDL+++IW A R Q + A S RH + +
Sbjct: 241 LKSPIADSSVLRLVSASDDLSVRIWVAK--REQEDEEQAKLELPSSIRHTNEMVWEVESV 298
Query: 271 IFSVHWSREGIIASGAADDSVQFFVESKDDLI--DGPSYKMLLKK--EKAHDM-DVNSVQ 325
+ SVH +A A + ++ + K ++ E AH + ++N V
Sbjct: 299 LPSVHKYPVYSVAWSALTGKIASAGSDGKIVVYSETEKGKWVIDSIHEGAHGVHEINCVI 358
Query: 326 WSP--GERRLLASASDDGMIKIWEL 348
W+ E +L SA DDG + +W++
Sbjct: 359 WAQLDDENEILVSAGDDGYVNLWKI 383
Score = 210 (79.0 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 70/272 (25%), Positives = 126/272 (46%)
Query: 32 TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLL 89
+ V P+ A+ S DK+ ++++ SA +F A LE+ H R++RS A+ P G
Sbjct: 17 SVSVHPTLPIIATASTDKSTKLYKLSARQKF-PLVAKLEDTHKRSIRSVAFKPPLGGADT 75
Query: 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149
+ F + G ++ ++ G + V ++ + K + P
Sbjct: 76 PKSDFLDLPAL---AAGSFDSTISVWGIDEP--DVEYDIEEVI----ANQKEIL---TSP 123
Query: 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209
NE+ +++++GH +VK V W+ L SCS D ++ +W + + + CV +
Sbjct: 124 NNEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVL--- 180
Query: 210 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 269
N HS + +S++ + L S S D TI+I+ DI +GD W + ++G H+
Sbjct: 181 -NDHSQDVKNVSWHPSMNILASSSYDDTIRIYQQDI----AGD---EWSCVGILNG-HEG 231
Query: 270 TIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
T++ S+ + S AD SV V + DDL
Sbjct: 232 TVWC---SKFESLKSPIADSSVLRLVSASDDL 260
Score = 186 (70.5 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 2 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS- 60
E L N E + +EGH + V ++ W G ASCS DK+V IWE +
Sbjct: 118 EILTSPNNEWNLMAIIEGHENEVKAVDWN----FQG--QYLASCSRDKSVWIWETDPETL 171
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGD-YECVATLEGHE 118
+ C AVL + H++ V++ +W PS +LA++S+D T I++ D+ GD + CV L GHE
Sbjct: 172 EEFECVAVLND-HSQDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHE 230
Query: 119 NEV--------KSVSWNASGTLLATCGRDKSVWIW 145
V KS ++S L + D SV IW
Sbjct: 231 GTVWCSKFESLKSPIADSSVLRLVSASDDLSVRIW 265
>UNIPROTKB|A4R7U3 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:242507 "Magnaporthe oryzae 70-15"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM001234 OrthoDB:EOG4CVKH5 RefSeq:XP_003716845.1
ProteinModelPortal:A4R7U3 STRING:A4R7U3 GeneID:2676736
KEGG:mgr:MGG_03150 Uniprot:A4R7U3
Length = 446
Score = 305 (112.4 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 70/159 (44%), Positives = 93/159 (58%)
Query: 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE----FECVS 157
+D D+E LEGHENE+KS +++ SG LATC RDKS+WIWE + NE +E V+
Sbjct: 129 KDNDDDWEFTLVLEGHENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWETVA 188
Query: 158 VLQGHAQDVKMVQWHPTM----------DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 207
VL H DVK V W P + DVL S SYD+TI++W ED D + W CV +
Sbjct: 189 VLTEHDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIW-REDGDGE-WACVAVLE 246
Query: 208 ESNNGHSSTIWALSFNAKGD-----KLVSCSDDLTIKIW 241
GHSST+W + + K D +L+S S D TI++W
Sbjct: 247 ----GHSSTVWGVQWEPKVDNTKFPRLISWSADKTIRVW 281
Score = 240 (89.5 bits), Expect = 9.9e-23, Sum P(3) = 9.9e-23
Identities = 76/249 (30%), Positives = 112/249 (44%)
Query: 63 WNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG---GD--YECVATLEGH 117
W VLE H ++S A+SPSG+ LAT S D + IWEDVG GD +E VA L H
Sbjct: 135 WEFTLVLEG-HENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWETVAVLTEH 193
Query: 118 ENEVKSVSW-------NASG---TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167
+ +VK V+W N S +LA+ D ++ IW E+ CV+VL+GH+ V
Sbjct: 194 DGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSSTVW 253
Query: 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 227
VQW P +D + + I W+ D W Q E++ + + + G
Sbjct: 254 GVQWEPKVD---NTKFPRLIS--WSADKTIRVWTLEQDDPEASLSQPGAVQSPFKSGLGG 308
Query: 228 KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAA 287
+ + T+K WR + H R I+S WS+ G +AS +
Sbjct: 309 --IPNTMRRTLK---------------EEWRCSAVLPSVHTRDIYSASWSKNGRVASTGS 351
Query: 288 DDSVQFFVE 296
D S+ + E
Sbjct: 352 DGSILVYEE 360
Score = 174 (66.3 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 49/136 (36%), Positives = 70/136 (51%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF-- 62
+D ++E + LEGH + + S A+ P+ A+CS DK++ IWE ++
Sbjct: 131 NDDDWEFTLV--LEGHENEIKSAAFSPSG------QYLATCSRDKSIWIWEDVGANEGDD 182
Query: 63 -WNCKAVLEEMHTRTVRSCAWSPS--GK--------LLATASFDATTCIW-EDVGGDYEC 110
W AVL E H V+ AW P G+ +LA+AS+D T IW ED G++ C
Sbjct: 183 EWETVAVLTE-HDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWAC 241
Query: 111 VATLEGHENEVKSVSW 126
VA LEGH + V V W
Sbjct: 242 VAVLEGHSSTVWGVQW 257
Score = 124 (48.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 55/196 (28%), Positives = 78/196 (39%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTA---GVDGVAP-VFASCSGDKTVRIWEQSASS 60
++G+ E + L H V +AW P + +P V AS S D T+RIW +
Sbjct: 178 NEGDDEWETVAVLTEHDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDG 237
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSP---SGKL--LATASFDATTCIWEDVGGDYECVATLE 115
W C AVLE H+ TV W P + K L + S D T +W D E +
Sbjct: 238 E-WACVAVLEG-HSSTVWGVQWEPKVDNTKFPRLISWSADKTIRVWTLEQDDPEASLSQP 295
Query: 116 GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG-HAQDVKMVQWHPT 174
G V+S + G + T R E+ C +VL H +D+ W
Sbjct: 296 G---AVQSPFKSGLGGIPNTMRRTLK---------EEWRCSAVLPSVHTRDIYSASWSKN 343
Query: 175 MDVLFSCSYDNTIKVW 190
V S D +I V+
Sbjct: 344 GRVA-STGSDGSILVY 358
Score = 123 (48.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 43/150 (28%), Positives = 67/150 (44%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVA-PVFASCSGDKTVRIWEQSASSRFW 63
+DG+ E + LEGH+ VW + W+P VD P S S DKT+R+W
Sbjct: 233 EDGDGEWACVAVLEGHSSTVWGVQWEPK--VDNTKFPRLISWSADKTIRVWTLEQDDP-- 288
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG-HENEVK 122
+A L + V+S S G + T + ++ C A L H ++
Sbjct: 289 --EASLSQ--PGAVQSPFKSGLGGIPNTMR--------RTLKEEWRCSAVLPSVHTRDIY 336
Query: 123 SVSWNASGTLLATCGRDKSVWIWE-VMPGN 151
S SW+ +G + +T G D S+ ++E P N
Sbjct: 337 SASWSKNGRVAST-GSDGSILVYEECAPSN 365
Score = 107 (42.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 45/173 (26%), Positives = 71/173 (41%)
Query: 194 DTDSDN---WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250
D+D DN W + GH + I + +F+ G L +CS D +I IW D+ +
Sbjct: 126 DSDKDNDDDWEFTLVLE----GHENEIKSAAFSPSGQYLATCSRDKSIWIW-EDVGANEG 180
Query: 251 GDGYASWRHLCTISGYHDRTIFSVHWSRE--G---------IIASGAADDSVQFFVESKD 299
D W + ++ HD + V W + G ++AS + DD+++ + E
Sbjct: 181 DD---EWETVAVLTE-HDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWRE--- 233
Query: 300 DLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL----LASASDDGMIKIWEL 348
DG + + H V VQW P L S S D I++W L
Sbjct: 234 ---DGDGEWACVAVLEGHSSTVWGVQWEPKVDNTKFPRLISWSADKTIRVWTL 283
Score = 62 (26.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD----VLFSCSYDNTI 187
L+AT +KSV ++ + + ++ GH + V+ W P + L + S+D+T
Sbjct: 37 LIATA-HEKSVTVFSLSTLSAHS--NLTGGHTRSVRCAVWKPNLPSGKLCLVTASFDSTA 93
Query: 188 KVW-WAED 194
+W W D
Sbjct: 94 GLWRWEGD 101
Score = 55 (24.4 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 317 HDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
H D+ S WS R +AS DG I ++E
Sbjct: 331 HTRDIYSASWSKNGR--VASTGSDGSILVYE 359
Score = 55 (24.4 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 307 YKMLLKKEKAHD-MDVNSVQWSP---------GERRLLASASDDGMIKIWELANTL 352
+K+L K H ++N + W G +L + DDG+++ W+L ++
Sbjct: 389 WKVLGKVSDGHGPYEINHITWCSRYDAGVEQRGVEEMLVTTGDDGIVQAWQLKESI 444
Score = 47 (21.6 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIW 54
GHT V WKP + V AS D T +W
Sbjct: 63 GHTRSVRCAVWKPNLPSGKLCLVTASF--DSTAGLW 96
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 328 (120.5 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 88/249 (35%), Positives = 130/249 (52%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS 60
++ D EL +QT EGH +WS+A+ P DG AS S D T++IW+ +
Sbjct: 816 IDLWDSATGEL--LQTFEGHPHSIWSVAFAP----DGKE--LASASDDSTIKIWDLATGE 867
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120
+ L+ H+++VRS A+SP GKLLA++S D+T +W G+ + +LEG
Sbjct: 868 ----LQQTLDS-HSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQ--QSLEGRSGW 920
Query: 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180
VKSV+++ G LA+ +V +W G E + L+GH+Q V+ V + P L S
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATG---ELLQTLEGHSQSVRSVAFSPDGKQLAS 977
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
S D TIK+W +S QT GH I A++F+ G LVS SDD TIK+
Sbjct: 978 SSSDTTIKLW-----NSTTGELQQTFK----GHDLWIRAVAFSPDGKHLVSGSDDNTIKL 1028
Query: 241 WGADITRMQ 249
W + +Q
Sbjct: 1029 WDLATSELQ 1037
Score = 298 (110.0 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 111/360 (30%), Positives = 172/360 (47%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E QTLE H V S+ + P DG V S S D TV+IW+ +
Sbjct: 742 EQQTLENHLGPVESVVFSP----DGKQLV--SGSYDDTVKIWDPATGELLQTLDG----- 790
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H+ TV S A+SP GKLLA+ S+D T +W+ G E + T EGH + + SV++ G
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG--ELLQTFEGHPHSIWSVAFAPDGKE 848
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+ D ++ IW++ G E L H+Q V+ V + P +L S S D+TIKVW
Sbjct: 849 LASASDDSTIKIWDLATG---ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW-- 903
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG-ADITRMQSG 251
N + +S G S + +++F+ G KL S S+ T+K+W A +Q+
Sbjct: 904 ------N-PATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTL 956
Query: 252 DGYA-SWRHLC-------TISGYHDRTIFSVHWSREGIIASGAADD----SVQFFVESKD 299
+G++ S R + S D TI + + + + D +V F + K
Sbjct: 957 EGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKH 1016
Query: 300 DLIDGP---SYKM--LLKKE-----KAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
L+ G + K+ L E + H V++V +SP +++L AS+S D IK+W+ A
Sbjct: 1017 -LVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQL-ASSSLDSTIKLWDSA 1074
Score = 281 (104.0 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 88/321 (27%), Positives = 147/321 (45%)
Query: 54 WEQSAS-SRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVA 112
W Q + W+ + E H V S +SP GK L + S+D T IW+ G E +
Sbjct: 729 WSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATG--ELLQ 786
Query: 113 TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172
TL+GH V+S++++ G LLA+ D ++ +W+ G E + +GH + V +
Sbjct: 787 TLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG---ELLQTFEGHPHSIWSVAFA 843
Query: 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232
P L S S D+TIK+W D QT+ + HS ++ +++F+ G L S
Sbjct: 844 PDGKELASASDDSTIKIW-----DLATGELQQTL----DSHSQSVRSVAFSPDGKLLASS 894
Query: 233 SDDLTIKIWGADITRMQSG-DGYASW----------RHLC------TISGYHDRT---IF 272
S D TIK+W +Q +G + W + L T+ ++ T +
Sbjct: 895 SLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQ 954
Query: 273 SVHWSREGIIASGAADDSVQFFVESKDDLID--GPSYKMLLKKEKAHDMDVNSVQWSPGE 330
++ + + + + D Q S D I + L + K HD+ + +V +SP
Sbjct: 955 TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 331 RRLLASASDDGMIKIWELANT 351
+ L+ S SDD IK+W+LA +
Sbjct: 1015 KHLV-SGSDDNTIKLWDLATS 1034
Score = 262 (97.3 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 109/357 (30%), Positives = 171/357 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+QTL+GH+ V SLA+ P DG + AS S D T+ +W+ SA+ E H
Sbjct: 785 LQTLDGHSGTVESLAFSP----DG--KLLASGSYDNTIDLWD-SATGELLQTF----EGH 833
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
++ S A++P GK LA+AS D+T IW+ G+ + TL+ H V+SV+++ G LL
Sbjct: 834 PHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQ--QTLDSHSQSVRSVAFSPDGKLL 891
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW--- 190
A+ D ++ +W G E L+G + VK V + P L S S NT+K+W
Sbjct: 892 ASSSLDSTIKVWNPATG---ELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPA 948
Query: 191 WAEDTDSDNWHC--VQTISESNNGH---SST------IW-----ALSFNAKGDKL----V 230
E + H V++++ S +G SS+ +W L KG L V
Sbjct: 949 TGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAV 1008
Query: 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADD 289
+ S D + G+D ++ D S L H R++ +V +S + +AS + D
Sbjct: 1009 AFSPDGKHLVSGSDDNTIKLWDLATS--ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDS 1066
Query: 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+++ + D G + L + H V SV +SP + +LLAS S DG IK+W
Sbjct: 1067 TIKLW-----DSATGELQRTL----EGHSQGVRSVTFSP-DGKLLASNSYDGTIKLW 1113
Score = 256 (95.2 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 76/227 (33%), Positives = 120/227 (52%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
Q+LE H+ V ++A+ P D AS S D T+++W+ SA+ + LE H+
Sbjct: 1038 QSLEDHSRSVHAVAFSPD---D---KQLASSSLDSTIKLWD-SATGEL---QRTLEG-HS 1086
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
+ VRS +SP GKLLA+ S+D T +W + G+ + TL G + V SV+++ G LA
Sbjct: 1087 QGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ--QTLTGRSDWVDSVAFSPDGKQLA 1144
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAED 194
+ D ++ +W+ G E + L+GH+ ++ V + P +L S SYD T K+W
Sbjct: 1145 SGYYDSTIKLWDSATG---ELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW---- 1197
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D +Q I E GHS + +++F+ G L S S TIK+W
Sbjct: 1198 -DPATGELLQ-IFE---GHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Score = 243 (90.6 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 104/358 (29%), Positives = 162/358 (45%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
QTL+ H+ V S+A+ P DG + AS S D T+++W + + LE +
Sbjct: 870 QTLDSHSQSVRSVAFSP----DG--KLLASSSLDSTIKVWNPATGE----LQQSLEG-RS 918
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
V+S A+SP GK LA+ S T +W G E + TLEGH V+SV+++ G LA
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNPATG--ELLQTLEGHSQSVRSVAFSPDGKQLA 976
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAED 194
+ D ++ +W G E +GH ++ V + P L S S DNTIK+W
Sbjct: 977 SSSSDTTIKLWNSTTG---ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLAT 1033
Query: 195 TD-----SDNWHCVQTISES-------NNGHSSTI--WALSFNAKGDKLVSCSDDLTIKI 240
++ D+ V ++ S ++ STI W + L S +
Sbjct: 1034 SELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVT 1093
Query: 241 WGAD--ITRMQSGDGYAS-WRHLC-----TISGYHDRTIFSVHWSREGI-IASGAADDSV 291
+ D + S DG W L T++G D + SV +S +G +ASG D ++
Sbjct: 1094 FSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSD-WVDSVAFSPDGKQLASGYYDSTI 1152
Query: 292 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
+ + D G LL+ + H + SV +SP + +LLAS S D K+W+ A
Sbjct: 1153 KLW-----DSATGE----LLQTLEGHSDRIQSVVFSP-DGKLLASGSYDQTAKLWDPA 1200
Score = 224 (83.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 86/302 (28%), Positives = 141/302 (46%)
Query: 3 FLDDGNYELREIQTLEGHTDRVWSLAW---KPT--AGVDGVAPVFASCSGDKTVRIWEQS 57
F DG EL + T ++W LA + T + V V S G K +
Sbjct: 842 FAPDGK-ELASAS--DDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG-KLLASSSLD 897
Query: 58 ASSRFWN-CKAVLEE-MHTRT--VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT 113
++ + WN L++ + R+ V+S A+SP GK LA+ S T +W G E + T
Sbjct: 898 STIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATG--ELLQT 955
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
LEGH V+SV+++ G LA+ D ++ +W G E +GH ++ V + P
Sbjct: 956 LEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG---ELQQTFKGHDLWIRAVAFSP 1012
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
L S S DNTIK+W D + + +S HS ++ A++F+ +L S S
Sbjct: 1013 DGKHLVSGSDDNTIKLW---DLATSE------LQQSLEDHSRSVHAVAFSPDDKQLASSS 1063
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQ 292
D TIK+W + +Q T+ G H + + SV +S +G ++AS + D +++
Sbjct: 1064 LDSTIKLWDSATGELQR-----------TLEG-HSQGVRSVTFSPDGKLLASNSYDGTIK 1111
Query: 293 FF 294
+
Sbjct: 1112 LW 1113
Score = 183 (69.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 53/160 (33%), Positives = 85/160 (53%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
D EL +QTLEGH+DR+ S+ + P DG + AS S D+T ++W+ +
Sbjct: 1156 DSATGEL--LQTLEGHSDRIQSVVFSP----DG--KLLASGSYDQTAKLWDPATGELLQ- 1206
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
+ E H++ V S A+SP GKLLA++S+ T +W+ V G E + TL + SV
Sbjct: 1207 ----IFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTG--ELLQTLNDPDESAGSV 1260
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164
+++ G LA+ + IW+ G E + L+GH++
Sbjct: 1261 AFSPDGNRLASVDIFDTK-IWDPATG---ELLQALKGHSK 1296
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 98/323 (30%), Positives = 152/323 (47%)
Query: 40 PVFA---SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA 96
P+FA S S D T+RIW+ + K HT +V+ A+ GKLLA+ S D
Sbjct: 118 PIFALMVSASEDATIRIWDFETGEYERSLKG-----HTDSVQDVAFDAQGKLLASCSADL 172
Query: 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156
+ +W D YEC+ T+ GH++ V SV++ +G + + RD+++ +WEV G CV
Sbjct: 173 SIKLW-DFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGY---CV 228
Query: 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-----DNWHCVQTISESNN 211
GH + V+MV+ H + +CS D TI+VW D D+ H V+ I+ +
Sbjct: 229 KTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPE 288
Query: 212 GHSSTI--WALSFNAKGDK----LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG 265
+S I A + N KG L S S D TI+IW + G L T+SG
Sbjct: 289 AAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSV-------GLC----LLTLSG 337
Query: 266 YHDRTIFSVHWSREGIIASGAADD-SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
HD + + + G A+DD +++ + DL + K +K AH S+
Sbjct: 338 -HDNWVRGLAFHPGGKYLVSASDDKTIRVW-----DLRN----KRCMKTLYAHQHFCTSI 387
Query: 325 QWSPGERRLLASASDDGMIKIWE 347
+ ++ S S D +K+WE
Sbjct: 388 DFHKAHPYVI-SGSVDQTVKVWE 409
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 80/287 (27%), Positives = 141/287 (49%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H ++ + P L+ +AS DAT IW+ G+YE +L+GH + V+ V+++A G L
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYE--RSLKGHTDSVQDVAFDAQGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D S+ +W+ +EC+ + GH +V V + P D + S S D TIK+W
Sbjct: 165 LASCSADLSIKLWDFQ--QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW-- 220
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW--GADITRMQS 250
+ +CV+T + GH + + + +G +CS+D TI++W + +++
Sbjct: 221 ---EVATGYCVKTYT----GHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL 273
Query: 251 GDGY-----ASWRHLCTISGYHDRT-IFSVHWSREG-IIASGAADDSVQFFVESKDDLID 303
D +W S ++ + +G +ASG+ D +++ + D+
Sbjct: 274 RDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIW-----DVSV 328
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G + L HD V + + PG + L+ SASDD I++W+L N
Sbjct: 329 G----LCLLTLSGHDNWVRGLAFHPGGKYLV-SASDDKTIRVWDLRN 370
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 83/283 (29%), Positives = 129/283 (45%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
+ G YE ++L+GHTD V +A+ D + ASCS D ++++W+ S +
Sbjct: 138 ETGEYE----RSLKGHTDSVQDVAF------DAQGKLLASCSADLSIKLWDFQQS---YE 184
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
C + H V S A+ P+G + +AS D T +WE G Y CV T GH V+ V
Sbjct: 185 CIKTMHG-HDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG-Y-CVKTYTGHREWVRMV 241
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV------- 177
+ G++ ATC D+++ +W N +C L+ H V+ + W P
Sbjct: 242 RVHIEGSIFATCSNDQTIRVWLT---NSKDCKVELRDHEHTVECIAWAPEAAASAINEAA 298
Query: 178 -------------LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224
L S S D TI++W D C+ T+S GH + + L+F+
Sbjct: 299 GADNKKGHHQGPFLASGSRDKTIRIW-----DVSVGLCLLTLS----GHDNWVRGLAFHP 349
Query: 225 KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH 267
G LVS SDD TI++W D+ + + +H CT +H
Sbjct: 350 GGKYLVSASDDKTIRVW--DLRNKRCMKTLYAHQHFCTSIDFH 390
Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 113 TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172
+L GH + V ++ L+ + D ++ IW+ G E+E L+GH V+ V +
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETG-EYE--RSLKGHTDSVQDVAFD 159
Query: 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232
+L SCS D +IK+W D ++ C++T+ +GH + +++F GD ++S
Sbjct: 160 AQGKLLASCSADLSIKLW---DFQQ-SYECIKTM----HGHDHNVSSVAFVPAGDYVLSA 211
Query: 233 SDDLTIKIW 241
S D TIK+W
Sbjct: 212 SRDRTIKMW 220
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 145 WEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQ 204
W P +F L GH + V +HP ++ S S D TI++W D ++ +
Sbjct: 94 WIPRPPEKFS----LTGHRASITRVIFHPIFALMVSASEDATIRIW---DFETGEYE--- 143
Query: 205 TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S GH+ ++ ++F+A+G L SCS DL+IK+W
Sbjct: 144 ---RSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLW 177
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 293 (108.2 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 106/362 (29%), Positives = 161/362 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
+LEGH++ V S+A+ PT AS SGD TVR W+ S + + CK H
Sbjct: 109 SLEGHSEAVISVAFSPTG------KYLASGSGDTTVRFWDLSTETPHFTCKG-----HRH 157
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V S +WSP GK LA+ + +W+ G + TL GH + +SW N
Sbjct: 158 WVLSISWSPDGKKLASGCKNGQVLLWDPSTG-LQVGRTLTGHSKWITGLSWEPLHMNPEC 216
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+A+ +D SV +W+ G C +L GH Q V ++W +L+S S D TIKVW
Sbjct: 217 RYVASSSKDGSVRVWDTTAGR---CERILTGHTQSVTCLRWGGD-GLLYSASQDRTIKVW 272
Query: 191 WAED-----TDSDNWHCVQTISESNN-----GH----SSTIWALSFNAKGDKLVSCSDDL 236
A D T + H V T++ S + G +T+ A +L +
Sbjct: 273 RAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSR 332
Query: 237 TIKIWGADITRMQSG-DGYAS--W------RHLCTISGYHDRTIFSVHWSREG-IIASGA 286
+ G R+ SG D + W + L ++G H I V +S + I+AS +
Sbjct: 333 YNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTG-HQALINQVLFSPDSRIVASAS 391
Query: 287 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
D S++ + DG + K L + H V + WS + RLL S S D +K+W
Sbjct: 392 FDKSIKLW--------DGRTGKYLASL-RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVW 441
Query: 347 EL 348
++
Sbjct: 442 DV 443
Score = 223 (83.6 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 90/313 (28%), Positives = 146/313 (46%)
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
C + LE H+ V S A+SP+GK LA+ S D T W D+ + T +GH + V S+
Sbjct: 106 CTSSLEG-HSEAVISVAFSPTGKYLASGSGDTTVRFW-DLSTETPHF-TCKGHRHWVLSI 162
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MD----VLF 179
SW+ G LA+ ++ V +W+ P + L GH++ + + W P M+ +
Sbjct: 163 SWSPDGKKLASGCKNGQVLLWD--PSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVA 220
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S S D +++VW DT + C + ++ GH+ ++ L + G L S S D TIK
Sbjct: 221 SSSKDGSVRVW---DTTAGR--CERILT----GHTQSVTCLRWGGDG-LLYSASQDRTIK 270
Query: 240 IWGA-DITRMQSGDGYASWRHLCTIS-GYHDRTIFSVHWSREGIIASGAADDSVQFFVE- 296
+W A D ++ G+ W + +S Y RT E + + S++ E
Sbjct: 271 VWRAHDGVLCRTLQGHGHWVNTMALSTDYALRT--GAFEPAEATVNAQDLQGSLKELKER 328
Query: 297 --SKDDLI--DGPS--------YKMLL------KKEKA----HDMDVNSVQWSPGERRLL 334
S+ +L+ GP + + L KK A H +N V +SP + R++
Sbjct: 329 ASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP-DSRIV 387
Query: 335 ASASDDGMIKIWE 347
ASAS D IK+W+
Sbjct: 388 ASASFDKSIKLWD 400
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 35 VDGVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWSPSGKLLAT 91
V G P S S D T+ +W + K L M H + +SP +++A+
Sbjct: 336 VRGQGPERLVSGSDDFTLFLWSPAED------KKPLARMTGHQALINQVLFSPDSRIVAS 389
Query: 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151
ASFD + +W+ G Y +A+L GH V ++W+A LL + D ++ +W+V
Sbjct: 390 ASFDKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ- 446
Query: 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ + L GHA +V V W P + S D +++W
Sbjct: 447 --KLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 126 (49.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+TL GH+ + L+W+P ++ AS S D +VR+W+ +A C+ +L HT
Sbjct: 193 RTLTGHSKWITGLSWEPLH-MNPECRYVASSSKDGSVRVWDTTAG----RCERILTG-HT 246
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
++V W G LL +AS D T +W G C TL+GH + V +++
Sbjct: 247 QSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVL-C-RTLQGHGHWVNTMA 294
Score = 119 (46.9 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 35/157 (22%), Positives = 76/157 (48%)
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
D ++++W P + + ++ + GH + V + P ++ S S+D +IK+W D
Sbjct: 350 DFTLFLWS--PAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW-----DGR 402
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258
+ ++ GH + ++ ++++A LVS S D T+K+W ++ +
Sbjct: 403 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATD------- 451
Query: 259 HLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 294
+ G+ D +++V WS +G +ASG D ++ +
Sbjct: 452 ----LPGHADE-VYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 82 (33.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKM 309
DG ++L ++ G H ++ + WS + ++ SG++D +++ + V+++ D P
Sbjct: 400 DGRTG-KYLASLRG-HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPG--- 454
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H +V +V WSP +R+ AS D ++IW
Sbjct: 455 -------HADEVYAVDWSPDGQRV-ASGGKDKCLRIW 483
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 251 (93.4 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 69/206 (33%), Positives = 99/206 (48%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
+LEGH++ V S+A+ PT AS SGD TVR W+ S + + CK H
Sbjct: 109 SLEGHSEAVISVAFSPTG------KYLASGSGDTTVRFWDLSTETPHFTCKG-----HRH 157
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V S +WSP G+ LA+ + +W+ G + TL GH + +SW N
Sbjct: 158 WVLSISWSPDGRKLASGCKNGQILLWDPSTGK-QVGRTLAGHSKWITGLSWEPLHANPEC 216
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+A+ +D SV IW+ G C +L GH Q V ++W +L+S S D TIKVW
Sbjct: 217 RYVASSSKDGSVRIWDTTAGR---CERILTGHTQSVTCLRWGGD-GLLYSASQDRTIKVW 272
Query: 191 WAED-----TDSDNWHCVQTISESNN 211
A D T + H V T++ S +
Sbjct: 273 RAHDGVLCRTLQGHGHWVNTMALSTD 298
Score = 217 (81.4 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 86/311 (27%), Positives = 143/311 (45%)
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
C + LE H+ V S A+SP+GK LA+ S D T W D+ + T +GH + V S+
Sbjct: 106 CTSSLEG-HSEAVISVAFSPTGKYLASGSGDTTVRFW-DLSTETPHF-TCKGHRHWVLSI 162
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW---H--PTMDVLF 179
SW+ G LA+ ++ + +W+ G + L GH++ + + W H P +
Sbjct: 163 SWSPDGRKLASGCKNGQILLWDPSTGKQVG--RTLAGHSKWITGLSWEPLHANPECRYVA 220
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S S D ++++W DT + C + ++ GH+ ++ L + G L S S D TIK
Sbjct: 221 SSSKDGSVRIW---DTTAGR--CERILT----GHTQSVTCLRWGGDG-LLYSASQDRTIK 270
Query: 240 IWGA-DITRMQSGDGYASWRHLCTIS-GYHDRT-IF--------------SVHWSREGII 282
+W A D ++ G+ W + +S Y RT F S+ +E +
Sbjct: 271 VWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERAL 330
Query: 283 A--SGAADDSVQFFVESKDDL---IDGPSY-KMLLKKEKAHDMDVNSVQWSPGERRLLAS 336
+ + + V DD + P+ K L + H +N V +SP + R++AS
Sbjct: 331 SRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP-DSRIVAS 389
Query: 337 ASDDGMIKIWE 347
AS D IK+W+
Sbjct: 390 ASFDKSIKLWD 400
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/179 (27%), Positives = 79/179 (44%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLEEM- 72
Q L+G + A V G P S S D T+ +W + K L M
Sbjct: 316 QDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAED------KKPLTRMT 369
Query: 73 -HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H + +SP +++A+ASFD + +W+ G Y +A+L GH V ++W+A
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSR 427
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
LL + D ++ +W+V + L GHA +V V W P + S D +++W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQ---KLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 126 (49.4 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 38/111 (34%), Positives = 57/111 (51%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+TL GH+ + L+W+P V AS S D +VRIW+ +A C+ +L HT
Sbjct: 193 RTLAGHSKWITGLSWEPLHANPECRYV-ASSSKDGSVRIWDTTAG----RCERILTG-HT 246
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
++V W G LL +AS D T +W G C TL+GH + V +++
Sbjct: 247 QSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVL-C-RTLQGHGHWVNTMA 294
Score = 117 (46.2 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 35/157 (22%), Positives = 75/157 (47%)
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
D ++++W P + + ++ + GH + V + P ++ S S+D +IK+W D
Sbjct: 350 DFTLFLWS--PAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLW-----DGR 402
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258
+ ++ GH + ++ ++++A LVS S D T+K+W ++
Sbjct: 403 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMD------- 451
Query: 259 HLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 294
+ G+ D +++V WS +G +ASG D ++ +
Sbjct: 452 ----LPGHADE-VYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 84 (34.6 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKM 309
DG ++L ++ G H ++ + WS + ++ SG++D +++ + V+++ +D P
Sbjct: 400 DGRTG-KYLASLRG-HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPG--- 454
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H +V +V WSP +R+ AS D ++IW
Sbjct: 455 -------HADEVYAVDWSPDGQRV-ASGGKDKCLRIW 483
Score = 79 (32.9 bits), Expect = 6.6e-25, Sum P(2) = 6.6e-25
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 260 LCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHD 318
L ++G H I V +S + I+AS + D S++ + DG + K L + H
Sbjct: 365 LTRMTG-HQALINQVLFSPDSRIVASASFDKSIKLW--------DGRTGKYLASL-RGHV 414
Query: 319 MDVNSVQWSPGERRLLASASDDGMIKIWEL 348
V + WS + RLL S S D +K+W++
Sbjct: 415 AAVYQIAWS-ADSRLLVSGSSDSTLKVWDV 443
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 292 (107.8 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 106/362 (29%), Positives = 161/362 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
+LEGH++ V S+A+ PT AS SGD TVR W+ S + + CK H
Sbjct: 111 SLEGHSEAVISVAFSPTG------KYLASGSGDTTVRFWDLSTETPHFTCKG-----HRH 159
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V S +WSP GK LA+ + +W+ G + TL GH + +SW N
Sbjct: 160 WVLSISWSPDGKKLASGCKNGQILLWDPSTGT-QVGRTLTGHSKWITGLSWEPLHMNPEC 218
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+A+ +D SV +W+ G C +L GH Q V ++W +L+S S D TIKVW
Sbjct: 219 RYVASSSKDGSVRVWDTTAGR---CERILTGHTQSVTCLRWGGD-GLLYSASQDRTIKVW 274
Query: 191 WAED-----TDSDNWHCVQTISESNN-----GH----SSTIWALSFNAKGDKLVSCSDDL 236
A D T + H V T++ S + G +T+ A +L +
Sbjct: 275 RAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSR 334
Query: 237 TIKIWGADITRMQSG-DGYAS--W------RHLCTISGYHDRTIFSVHWSREG-IIASGA 286
+ G R+ SG D + W + L ++G H I V +S + I+AS +
Sbjct: 335 YNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTG-HQALINQVLFSPDSRIVASAS 393
Query: 287 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
D S++ + DG + K L + H V + WS + RLL S S D +K+W
Sbjct: 394 FDKSIKLW--------DGRTGKYLASL-RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVW 443
Query: 347 EL 348
++
Sbjct: 444 DV 445
Score = 220 (82.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 89/313 (28%), Positives = 146/313 (46%)
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
C + LE H+ V S A+SP+GK LA+ S D T W D+ + T +GH + V S+
Sbjct: 108 CTSSLEG-HSEAVISVAFSPTGKYLASGSGDTTVRFW-DLSTETPHF-TCKGHRHWVLSI 164
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MD----VLF 179
SW+ G LA+ ++ + +W+ G + L GH++ + + W P M+ +
Sbjct: 165 SWSPDGKKLASGCKNGQILLWDPSTGTQVG--RTLTGHSKWITGLSWEPLHMNPECRYVA 222
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S S D +++VW DT + C + ++ GH+ ++ L + G L S S D TIK
Sbjct: 223 SSSKDGSVRVW---DTTAGR--CERILT----GHTQSVTCLRWGGDG-LLYSASQDRTIK 272
Query: 240 IWGA-DITRMQSGDGYASWRHLCTIS-GYHDRTIFSVHWSREGIIASGAADDSVQFFVE- 296
+W A D ++ G+ W + +S Y RT E + + S++ E
Sbjct: 273 VWRAHDGVLCRTLQGHGHWVNTMALSTDYALRT--GAFEPAEATVNAQDLQGSLKELKER 330
Query: 297 --SKDDLI--DGPS--------YKMLL------KKEKA----HDMDVNSVQWSPGERRLL 334
S+ +L+ GP + + L KK A H +N V +SP + R++
Sbjct: 331 ASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP-DSRIV 389
Query: 335 ASASDDGMIKIWE 347
ASAS D IK+W+
Sbjct: 390 ASASFDKSIKLWD 402
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 35 VDGVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWSPSGKLLAT 91
V G P S S D T+ +W + K L M H + +SP +++A+
Sbjct: 338 VRGQGPERLVSGSDDFTLFLWSPAED------KKPLARMTGHQALINQVLFSPDSRIVAS 391
Query: 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151
ASFD + +W+ G Y +A+L GH V ++W+A LL + D ++ +W+V
Sbjct: 392 ASFDKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ- 448
Query: 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ + L GHA +V V W P + S D +++W
Sbjct: 449 --KLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 126 (49.4 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+TL GH+ + L+W+P ++ AS S D +VR+W+ +A C+ +L HT
Sbjct: 195 RTLTGHSKWITGLSWEPLH-MNPECRYVASSSKDGSVRVWDTTAG----RCERILTG-HT 248
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
++V W G LL +AS D T +W G C TL+GH + V +++
Sbjct: 249 QSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVL-C-RTLQGHGHWVNTMA 296
Score = 119 (46.9 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 35/157 (22%), Positives = 76/157 (48%)
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
D ++++W P + + ++ + GH + V + P ++ S S+D +IK+W D
Sbjct: 352 DFTLFLWS--PAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW-----DGR 404
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258
+ ++ GH + ++ ++++A LVS S D T+K+W ++ +
Sbjct: 405 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTD------- 453
Query: 259 HLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 294
+ G+ D +++V WS +G +ASG D ++ +
Sbjct: 454 ----LPGHADE-VYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 82 (33.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKM 309
DG ++L ++ G H ++ + WS + ++ SG++D +++ + V+++ D P
Sbjct: 402 DGRTG-KYLASLRG-HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPG--- 456
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H +V +V WSP +R+ AS D ++IW
Sbjct: 457 -------HADEVYAVDWSPDGQRV-ASGGKDKCLRIW 485
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 288 (106.4 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 108/364 (29%), Positives = 165/364 (45%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
+LEGH++ V S+A+ PT AS SGD TVR W+ S + + C+ H
Sbjct: 60 SLEGHSEAVISVAFSPTG------KYLASGSGDTTVRFWDLSTETPHFTCQG-----HRH 108
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V S +WSP GK LA+ + +W+ G + L GH + +SW N
Sbjct: 109 WVLSISWSPDGKTLASGCKNGQILLWDPSTGK-QVGRVLAGHSKWITGLSWEPLHANPEC 167
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+A+ +D SV +W+ G C +L GH Q V ++W +L+S S D TIKVW
Sbjct: 168 RYMASSSKDGSVRVWDTTAGR---CERILTGHTQSVTCLRWGGD-GLLYSASQDRTIKVW 223
Query: 191 WAED-----TDSDNWHCVQTISESNNGHSSTIWAL-----SFNAKGDKLVSCSD--DLTI 238
A D T + H V T++ S + ++ A S NA+ D S + D +
Sbjct: 224 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASINAQ-DLQGSLQELKDRAL 281
Query: 239 K----IWGADITRMQSG-DGYA--SW------RHLCTISGYHDRTIFSVHWSREG-IIAS 284
+ + G R+ SG D + W + L ++G H I V +S + IIAS
Sbjct: 282 RRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTG-HQALINQVLFSPDSRIIAS 340
Query: 285 GAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 344
+ D S++ + DG + K L + H V + WS + RLL S S D +K
Sbjct: 341 ASFDKSIKLW--------DGRTGKYLASL-RGHVAAVYQIAWS-ADSRLLVSGSSDSTLK 390
Query: 345 IWEL 348
+W++
Sbjct: 391 VWDV 394
Score = 224 (83.9 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 89/312 (28%), Positives = 147/312 (47%)
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
C + LE H+ V S A+SP+GK LA+ S D T W D+ + T +GH + V S+
Sbjct: 57 CTSSLEG-HSEAVISVAFSPTGKYLASGSGDTTVRFW-DLSTETPHF-TCQGHRHWVLSI 113
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW---H--PTMDVLF 179
SW+ G LA+ ++ + +W+ G + VL GH++ + + W H P +
Sbjct: 114 SWSPDGKTLASGCKNGQILLWDPSTGKQVG--RVLAGHSKWITGLSWEPLHANPECRYMA 171
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S S D +++VW DT + C + ++ GH+ ++ L + G L S S D TIK
Sbjct: 172 SSSKDGSVRVW---DTTAGR--CERILT----GHTQSVTCLRWGGDG-LLYSASQDRTIK 221
Query: 240 IWGA-DITRMQSGDGYASWRHLCTIS-GYHDRT-IF-----SVH-WSREGIIASGAADDS 290
+W A D ++ G+ W + +S Y RT F S++ +G + D +
Sbjct: 222 VWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQE-LKDRA 280
Query: 291 VQFF-----------VESKDDL---IDGPSY-KMLLKKEKAHDMDVNSVQWSPGERRLLA 335
++ + V DD + P+ K L + H +N V +SP + R++A
Sbjct: 281 LRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSP-DSRIIA 339
Query: 336 SASDDGMIKIWE 347
SAS D IK+W+
Sbjct: 340 SASFDKSIKLWD 351
Score = 172 (65.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLEEM- 72
Q L+G + A + V G P S S D T+ +W + K L M
Sbjct: 267 QDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAED------KKPLARMT 320
Query: 73 -HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H + +SP +++A+ASFD + +W+ G Y +A+L GH V ++W+A
Sbjct: 321 GHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSR 378
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
LL + D ++ +W+V + + L GHA +V V W P + S D +++W
Sbjct: 379 LLVSGSSDSTLKVWDVKAQ---KLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 121 (47.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+ L GH+ + L+W+P + AS S D +VR+W+ +A C+ +L HT
Sbjct: 144 RVLAGHSKWITGLSWEPLHA-NPECRYMASSSKDGSVRVWDTTAG----RCERILTG-HT 197
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
++V W G LL +AS D T +W G C TL+GH + V +++
Sbjct: 198 QSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVL-C-RTLQGHGHWVNTMA 245
Score = 120 (47.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 36/157 (22%), Positives = 77/157 (49%)
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
D ++++W P + + ++ + GH + V + P ++ S S+D +IK+W D
Sbjct: 301 DFTLFMWS--PAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW-----DGR 353
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258
+ ++ GH + ++ ++++A LVS S D T+K+W ++ + D
Sbjct: 354 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL-AAD------ 402
Query: 259 HLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 294
+ G+ D +++V WS +G +ASG D ++ +
Sbjct: 403 ----LPGHADE-VYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 82 (33.9 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKM 309
DG ++L ++ G H ++ + WS + ++ SG++D +++ + V+++ D P
Sbjct: 351 DGRTG-KYLASLRG-HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPG--- 405
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H +V +V WSP +R+ AS D ++IW
Sbjct: 406 -------HADEVYAVDWSPDGQRV-ASGGKDKCLRIW 434
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 101/346 (29%), Positives = 159/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V + S S D T+++W+ A K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSLMVSASEDATIKVWDYEAGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ +GKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDQTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + +L SCS D T++VW
Sbjct: 207 IVSASRDKTMKMWEVATGY---CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWAL-SFNAKGDK----LVSCSDDLTIKIW 241
+ ++ H V+ IS + + H + A S N K K L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
DI+ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DIST-----GMC----LMTLVG-HDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + ++ + S D +K+WE
Sbjct: 370 ------KRCMKTLSAHEHFVTSLDFHKASPYVV-TGSVDQTVKVWE 408
Score = 270 (100.1 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 82/287 (28%), Positives = 134/287 (46%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P L+ +AS DAT +W+ GD+E TL+GH + V+ +S++ +G L
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFE--RTLKGHTDSVQDISFDQTGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D T+K+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G L SCS+D T+++W A++
Sbjct: 220 ---EVATGYCVKTFT----GHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMW-----DIST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + PG R + S +DD ++IW+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHPGGR-FVVSCADDKTLRIWDYKN 369
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 298 (110.0 bits), Expect = 8.6e-25, P = 8.6e-25
Identities = 110/333 (33%), Positives = 157/333 (47%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ AS SGD TV+IW+ +A+S N LE H V+S +S +LLA+AS D T I
Sbjct: 277 LLASASGDGTVKIWD-TATSFLQN---TLEG-HNEWVKSVVFSHDSRLLASASDDGTVKI 331
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W+ G + + L+GH + V+SV ++ L+A+ D++V IWE G +
Sbjct: 332 WDTATGTLQRM--LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL---LRHTFE 386
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
H V V + L S S +K+W DT + + +Q + E GH + ++
Sbjct: 387 DHEDSVMAVSFAHDSRRLASASDGGNVKIW---DTRTGS---LQNVLE---GHDDCVNSV 437
Query: 221 SFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHD-RTIFSVH--- 275
SF+ L S SDD T+KIW A +Q +G+ W S HD R I S
Sbjct: 438 SFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFS--HDSRLIASASDDM 495
Query: 276 ----WSREGIIASG---AADDSVQFFVESKDD-LIDGPSYKMLLK--------KE---KA 316
W + + D+ V+ V S D L+ S M +K E +
Sbjct: 496 TVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEG 555
Query: 317 HDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
HD VNSV +SP + RLLASASDDG +KIW A
Sbjct: 556 HDDRVNSVSFSP-DSRLLASASDDGTVKIWYAA 587
Score = 264 (98.0 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 79/247 (31%), Positives = 122/247 (49%)
Query: 5 DDGNYELREIQT------LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA 58
D GN ++ + +T LEGH D V S+++ P + + AS S D+TV+IW +
Sbjct: 409 DGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRL------LASASDDRTVKIWHAAT 462
Query: 59 SSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118
S + LE H VRS +S +L+A+AS D T IW+ + LE H+
Sbjct: 463 GS----LQRTLEG-HNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQ--NNLESHD 515
Query: 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
N V+SV ++ LLA+ D +V IW+ G+ E + L+GH V V + P +L
Sbjct: 516 NWVRSVVFSHDSRLLASASDDMTVKIWDTATGS-LE--NTLEGHDDRVNSVSFSPDSRLL 572
Query: 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTI 238
S S D T+K+W+A T+ + +G +L+F+ + L S DD T+
Sbjct: 573 ASASDDGTVKIWYA---------ATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTV 623
Query: 239 KIWGADI 245
KIW +I
Sbjct: 624 KIWDMEI 630
Score = 231 (86.4 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 92/299 (30%), Positives = 137/299 (45%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H R V S ++S +LLA+AS D T IW+ + TLEGH VKSV ++ L
Sbjct: 262 HDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQ--NTLEGHNEWVKSVVFSHDSRL 319
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+ D +V IW+ G +L+GH V+ V + ++ S S D T+++W
Sbjct: 320 LASASDDGTVKIWDTATGT---LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIW-- 374
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG- 251
E T H T + H ++ A+SF +L S SD +KIW +Q+
Sbjct: 375 ETTTGLLRH---TFED----HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVL 427
Query: 252 DGYASWRHLCTIS--------GYHDRTIFSVHWSREGIIAS-GAADDSVQFFVESKDD-L 301
+G+ + + S DRT+ H + + + +D V+ V S D L
Sbjct: 428 EGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRL 487
Query: 302 IDGPSYKMLLK-----------KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
I S M +K ++HD V SV +S + RLLASASDD +KIW+ A
Sbjct: 488 IASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH-DSRLLASASDDMTVKIWDTA 545
Score = 226 (84.6 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 76/245 (31%), Positives = 116/245 (47%)
Query: 5 DDGNYELREIQT------LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA 58
DDG ++ + T L+GH D V S+ + + + AS S D+TVRIWE +
Sbjct: 325 DDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRL------IASGSNDRTVRIWETTT 378
Query: 59 SSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118
+ E+ H +V + +++ + LA+AS IW+ G + V LEGH+
Sbjct: 379 GL----LRHTFED-HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNV--LEGHD 431
Query: 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
+ V SVS++ LLA+ D++V IW G+ L+GH V+ V + ++
Sbjct: 432 DCVNSVSFSPDSRLLASASDDRTVKIWHAATGS---LQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS--FNAKGDKLVSCSDDL 236
S S D T+K+W DT T+ NN S W S F+ L S SDD+
Sbjct: 489 ASASDDMTVKIW---DT--------ATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDM 537
Query: 237 TIKIW 241
T+KIW
Sbjct: 538 TVKIW 542
Score = 217 (81.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 96/360 (26%), Positives = 163/360 (45%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TLEGH + V S+ + + + AS S D TV+IW+ + + + +L+ H
Sbjct: 300 TLEGHNEWVKSVVFSHDSRL------LASASDDGTVKIWDTATGT----LQRMLKG-HND 348
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
+VRS +S +L+A+ S D T IWE G T E HE+ V +VS+ LA+
Sbjct: 349 SVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLR--HTFEDHEDSVMAVSFAHDSRRLAS 406
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
+V IW+ G+ +VL+GH V V + P +L S S D T+K+W A T
Sbjct: 407 ASDGGNVKIWDTRTGS---LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAA-T 462
Query: 196 DS--------DNW-------HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
S ++W H + I+ +++ + IW + + L S + + +
Sbjct: 463 GSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVV 522
Query: 241 WGADITRMQSGDGYAS---WRHLC-----TISGYHDRTIFSVHWSREGIIASGAADD-SV 291
+ D + S + W T+ G+ DR + SV +S + + + A+DD +V
Sbjct: 523 FSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR-VNSVSFSPDSRLLASASDDGTV 581
Query: 292 QFFVESKDDL---IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ + + + DG S ++ + +H + LLASA DDG +KIW++
Sbjct: 582 KIWYAATGTVQHTFDG-SGRVAISLAFSHTSN------------LLASAMDDGTVKIWDM 628
Score = 172 (65.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 77/263 (29%), Positives = 123/263 (46%)
Query: 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
A +GH+ V SVS++ LLA+ D +V IW+ F + L+GH + VK V +
Sbjct: 257 AQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDT--ATSF-LQNTLEGHNEWVKSVVF 313
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
+L S S D T+K+W DT + T+ GH+ ++ ++ F+ + S
Sbjct: 314 SHDSRLLASASDDGTVKIW---DTATG------TLQRMLKGHNDSVRSVVFSHDSRLIAS 364
Query: 232 CSDDLTIKIWGAD--ITRMQSGDGYASWRHLCTISGYHD-RTIFSVH-------W-SREG 280
S+D T++IW + R D S + +S HD R + S W +R G
Sbjct: 365 GSNDRTVRIWETTTGLLRHTFEDHEDS---VMAVSFAHDSRRLASASDGGNVKIWDTRTG 421
Query: 281 IIAS---GAAD--DSVQFFVESK--DDLIDGPSYKM-------LLKKEKAHDMDVNSVQW 326
+ + G D +SV F +S+ D + K+ L + + H+ V SV +
Sbjct: 422 SLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVF 481
Query: 327 SPGERRLLASASDDGMIKIWELA 349
S + RL+ASASDD +KIW+ A
Sbjct: 482 SH-DSRLIASASDDMTVKIWDTA 503
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 233 (87.1 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 73/250 (29%), Positives = 106/250 (42%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS 60
ME D + L GH V+ AW P V+ + AS SGD T RIW + +S
Sbjct: 159 MEIDRDVEIPPNKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENS 212
Query: 61 RFWNCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECV 111
+ + VL E H + V S W+ G LLA S+D IW + G
Sbjct: 213 NGGSTQLVLRHCIREGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGN---LA 269
Query: 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
+TL H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 270 STLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDW 326
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
SC D I V C + ++ GH++ + A+ ++ G L S
Sbjct: 327 QNNT-TFASCGTDMCIHVC--------RLGCDLPV-KTFQGHTNEVNAIKWDPSGMLLAS 376
Query: 232 CSDDLTIKIW 241
CSDD+T+KIW
Sbjct: 377 CSDDMTLKIW 386
Score = 211 (79.3 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 75/286 (26%), Positives = 122/286 (42%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 271 TLGQHKGPIFALKWNKKGNY------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 319
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ D + +G D V T +GH NEV ++ W+ SG LLA+
Sbjct: 320 PALDVDWQ-NNTTFASCGTDMCIHVCR-LGCDLP-VKTFQGHTNEVNAIKWDPSGMLLAS 376
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + CV LQ H++++ ++W PT +L S S+D+T
Sbjct: 377 CSDDMTLKIWSM---KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDST 433
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D + C T+++ H +++++F+ G L S S D + IW
Sbjct: 434 VRLW-----DVEQGVCTHTLTK----HQEPVYSIAFSPDGKYLASGSFDKCVHIWNT--- 481
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG S++ G IF V W+ G + + A+D SV
Sbjct: 482 --QSGSLVHSYQGT---GG-----IFEVCWNARGDKVGASASDGSV 517
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 72/299 (24%), Positives = 119/299 (39%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEG-H 117
KA + H V CAW+P LLA+ S D+T IW GG + V EG H
Sbjct: 171 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWH 230
Query: 118 E----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLA D IW GN S L H + ++W+
Sbjct: 231 DVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGN---LASTLGQHKGPIFALKWNK 286
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + SC
Sbjct: 287 KGNYILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQ-NNTTFASCG 336
Query: 234 DDLTIKIW--GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-S 290
D+ I + G D+ + T G H + ++ W G++ + +DD +
Sbjct: 337 TDMCIHVCRLGCDLP-------------VKTFQG-HTNEVNAIKWDPSGMLLASCSDDMT 382
Query: 291 VQFFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
++ + +D + D ++ + K +P +LASAS D +++W++
Sbjct: 383 LKIWSMKQDACVHDLQAHSKEIYTIKWSP--TGPATSNPNSSIMLASASFDSTVRLWDV 439
Score = 152 (58.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDG---VAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H+ ++++ W PT + + AS S D TVR+W+ C L
Sbjct: 394 VHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGV----CTHTLT 449
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP GK LA+ SFD IW G V + +G + V WNA G
Sbjct: 450 K-HQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSL--VHSYQG-TGGIFEVCWNARG 505
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 506 DKVGASASDGSVCVLDL 522
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 51/182 (28%), Positives = 88/182 (48%)
Query: 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
AT+ G EN ++ N S + D+ V I P N+ +VL+GH +V + W
Sbjct: 140 ATVNGEENGAHEIN-NHSKPMEI----DRDVEI----PPNK---ATVLRGHESEVFICAW 187
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
+P D+L S S D+T ++W ++E++NG S+ + +G V
Sbjct: 188 NPVSDLLASGSGDSTARIW--------------NLNENSNGGSTQLVLRHCIREGWHDVP 233
Query: 232 CSDDLTIKIWGADITRMQSG--DGYAS-WR---HLCTISGYHDRTIFSVHWSREG--IIA 283
+ D+T W +D T + G DG+A W +L + G H IF++ W+++G I++
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYILS 293
Query: 284 SG 285
+G
Sbjct: 294 AG 295
Score = 108 (43.1 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 42/141 (29%), Positives = 63/141 (44%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH++ + A+ ++ G L SCSDD+T+KIW M+ A L H + I
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQD---ACVHDLQA----HSKEI 404
Query: 272 FSVHWSREGIIASGAADDSVQFFVESKD------DLIDGPSYKMLLKKEKAHDMDVNSVQ 325
+++ WS G S + S+ S D D+ G L K H V S+
Sbjct: 405 YTIKWSPTGPATSNP-NSSIMLASASFDSTVRLWDVEQGVCTHTLTK----HQEPVYSIA 459
Query: 326 WSPGERRLLASASDDGMIKIW 346
+SP + + LAS S D + IW
Sbjct: 460 FSP-DGKYLASGSFDKCVHIW 479
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 286 (105.7 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 106/363 (29%), Positives = 164/363 (45%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
+LEGH++ V S+A+ PT AS SGD TVR W+ S + + C+ H
Sbjct: 109 SLEGHSEAVISVAFSPTG------KYLASGSGDTTVRFWDLSTETPHFTCQG-----HRH 157
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V S +WSP GK LA+ + +W+ G + L GH + ++SW N
Sbjct: 158 WVLSISWSPDGKKLASGCKNGQILLWDPSTGK-QVGRALAGHSKWITALSWEPLHANPEC 216
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+A+ +D SV +W+ G C +L GH Q V ++W +L+S S D TIKVW
Sbjct: 217 RYVASSSKDGSVRVWDTTAGR---CERILTGHTQSVTCLRWGGD-GLLYSASQDRTIKVW 272
Query: 191 WAED-----TDSDNWHCVQTISESNNGHSSTIWAL-----SFNAKG--DKLVSCSDDLTI 238
A D T + H V T++ S + ++ A S NA+ L +
Sbjct: 273 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLRGSLQELKERALS 331
Query: 239 K---IWGADITRMQSG-DGYAS--W------RHLCTISGYHDRTIFSVHWSREG-IIASG 285
+ + G + R+ SG D + W + L ++G H I V +S + IIAS
Sbjct: 332 RYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTG-HQALINQVLFSPDSRIIASA 390
Query: 286 AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKI 345
+ D S++ + DG + K L + H V + WS + RLL S S D +K+
Sbjct: 391 SFDKSIKLW--------DGRTGKYLASL-RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKV 440
Query: 346 WEL 348
W++
Sbjct: 441 WDV 443
Score = 223 (83.6 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 89/313 (28%), Positives = 144/313 (46%)
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
C + LE H+ V S A+SP+GK LA+ S D T W D+ + T +GH + V S+
Sbjct: 106 CTSSLEG-HSEAVISVAFSPTGKYLASGSGDTTVRFW-DLSTETPHF-TCQGHRHWVLSI 162
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW---H--PTMDVLF 179
SW+ G LA+ ++ + +W+ G + L GH++ + + W H P +
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDPSTGKQVG--RALAGHSKWITALSWEPLHANPECRYVA 220
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S S D +++VW DT + C + ++ GH+ ++ L + G L S S D TIK
Sbjct: 221 SSSKDGSVRVW---DTTAGR--CERILT----GHTQSVTCLRWGGDG-LLYSASQDRTIK 270
Query: 240 IWGA-DITRMQSGDGYASWRHLCTIS-GYHDRTIFSVHWSREGIIASGAADDSVQFFVE- 296
+W A D ++ G+ W + +S Y RT E + + S+Q E
Sbjct: 271 VWRAHDGVLCRTLQGHGHWVNTMALSTDYALRT--GAFEPAEASVNAQDLRGSLQELKER 328
Query: 297 --SKDDLIDGPSYKMLL----------------KKEKA----HDMDVNSVQWSPGERRLL 334
S+ +L+ G + L+ KK A H +N V +SP + R++
Sbjct: 329 ALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP-DSRII 387
Query: 335 ASASDDGMIKIWE 347
ASAS D IK+W+
Sbjct: 388 ASASFDKSIKLWD 400
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWSPSGKLLATASFDATTCIW 101
S S D T+ +W + K L M H + +SP +++A+ASFD + +W
Sbjct: 346 SGSDDFTLFLWSPAED------KKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW 399
Query: 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
+ G Y +A+L GH V ++W+A LL + D ++ +W+V + + L G
Sbjct: 400 DGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ---KLAADLPG 454
Query: 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
HA +V V W P + S D +++W
Sbjct: 455 HADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 152 (58.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ AS S DK++++W+ + + H V AWS +LL + S D+T +
Sbjct: 386 IIASASFDKSIKLWDGRTGKYLASLRG-----HVAAVYQIAWSADSRLLVSGSSDSTLKV 440
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW 145
W DV + A L GH +EV +V W+ G +A+ G+DK + IW
Sbjct: 441 W-DVKAQ-KLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 121 (47.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 36/111 (32%), Positives = 57/111 (51%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+ L GH+ + +L+W+P V AS S D +VR+W+ +A C+ +L HT
Sbjct: 193 RALAGHSKWITALSWEPLHANPECRYV-ASSSKDGSVRVWDTTAG----RCERILTG-HT 246
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
++V W G LL +AS D T +W G C TL+GH + V +++
Sbjct: 247 QSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVL-C-RTLQGHGHWVNTMA 294
Score = 121 (47.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 36/157 (22%), Positives = 77/157 (49%)
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
D ++++W P + + ++ + GH + V + P ++ S S+D +IK+W D
Sbjct: 350 DFTLFLWS--PAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW-----DGR 402
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258
+ ++ GH + ++ ++++A LVS S D T+K+W ++ + D
Sbjct: 403 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL-AAD------ 451
Query: 259 HLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 294
+ G+ D +++V WS +G +ASG D ++ +
Sbjct: 452 ----LPGHADE-VYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 82 (33.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKM 309
DG ++L ++ G H ++ + WS + ++ SG++D +++ + V+++ D P
Sbjct: 400 DGRTG-KYLASLRG-HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPG--- 454
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H +V +V WSP +R+ AS D ++IW
Sbjct: 455 -------HADEVYAVDWSPDGQRV-ASGGKDKCLRIW 483
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 35 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 83
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 84 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 141
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 142 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 198
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 199 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 258
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 259 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 304
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 305 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 343
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 42 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 99
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 100 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 154
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 155 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 207
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 208 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 262
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 263 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 304
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 99/346 (28%), Positives = 156/346 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSAARDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 269 (99.8 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 80/287 (27%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S + D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 99/346 (28%), Positives = 155/346 (44%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V ++ SGKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + +SS A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
D++ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DVST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 272 (100.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/287 (28%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ SG L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVEDISFDHSGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DVST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 369
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 100/346 (28%), Positives = 155/346 (44%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVMVSASEDATIKVWDYETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ +GKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ SCS D T++VW
Sbjct: 207 IVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISESNNGHSSTIW-ALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + STI A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
DI+ G L T+ G HD + V + G ADD + K+
Sbjct: 324 --DIST-----GMC----LMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K +K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 269 (99.8 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 80/287 (27%), Positives = 136/287 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ +G L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHTGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-------GADI 245
+ +CV+T + GH + + N G + SCS+D T+++W A++
Sbjct: 220 ---EVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLID 303
+ SW + S + T S + G + SG+ D +++ + D+
Sbjct: 273 REHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMW-----DIST 327
Query: 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
G M L HD V V + G + +L S +DD +++W+ N
Sbjct: 328 G----MCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDFKN 369
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 283 (104.7 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 108/361 (29%), Positives = 162/361 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
+LEGHT+ V S+A+ PT AS SGD TVR W+ S + + K H
Sbjct: 122 SLEGHTEAVISVAFSPTG------KYLASGSGDTTVRFWDLSTETPQFTAKG-----HRH 170
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V S AWSP GK LA+ ++ +W+ G+ + L GH + + W N
Sbjct: 171 WVLSIAWSPDGKKLASGCKNSQIFLWDPATGN-QIGRVLTGHSKWITCLCWEPLHINPEC 229
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
LA+ +D S+ IW+ + G C +L GH Q V V+W +L+S S D TIKVW
Sbjct: 230 RYLASASKDGSIRIWDTLMGR---CDKILTGHTQSVTCVKWGGD-GLLYSSSQDRTIKVW 285
Query: 191 WAED-----TDSDNWHCVQTISESNN-----GH----SSTIWALSFNAKGDKLVSCSDDL 236
++D T + H V T++ S + G +TI + +L +
Sbjct: 286 RSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQR 345
Query: 237 TIKIWGADITRMQSG-DGYAS--WRH------LCTISGYHDRTIFSVHWSREG-IIASGA 286
K+ G R+ SG D + WR L ++G H I V +S + IIAS +
Sbjct: 346 YDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTG-HQALINQVLFSPDTRIIASAS 404
Query: 287 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
D S++ + +G + K L + H V + WS + RLL S S D +K+W
Sbjct: 405 FDKSIKLW--------EGRTGKYLTSL-RGHVSAVYQIAWS-ADSRLLVSGSSDSTLKVW 454
Query: 347 E 347
+
Sbjct: 455 D 455
Score = 236 (88.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 92/311 (29%), Positives = 149/311 (47%)
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
C + LE HT V S A+SP+GK LA+ S D T W D+ + T +GH + V S+
Sbjct: 119 CTSSLEG-HTEAVISVAFSPTGKYLASGSGDTTVRFW-DLSTETPQF-TAKGHRHWVLSI 175
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW---H--PTMDVLF 179
+W+ G LA+ ++ +++W+ GN+ VL GH++ + + W H P L
Sbjct: 176 AWSPDGKKLASGCKNSQIFLWDPATGNQIG--RVLTGHSKWITCLCWEPLHINPECRYLA 233
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S S D +I++W D+ C + ++ GH+ ++ + + G L S S D TIK
Sbjct: 234 SASKDGSIRIW-----DTLMGRCDKILT----GHTQSVTCVKWGGDG-LLYSSSQDRTIK 283
Query: 240 IWGA-DITRMQSGDGYASWRHLCTIS-GYHDRT-IF-----SVH-WSREGIIAS--GAAD 288
+W + D ++ G+A W + +S Y RT F +++ G +A A
Sbjct: 284 VWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQ 343
Query: 289 ---DSV-----QFFVESKDDL---IDGPSY-KMLLKKEKAHDMDVNSVQWSPGERRLLAS 336
D V + V DD + P+ K L++ H +N V +SP + R++AS
Sbjct: 344 QRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSP-DTRIIAS 402
Query: 337 ASDDGMIKIWE 347
AS D IK+WE
Sbjct: 403 ASFDKSIKLWE 413
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 35 VDGVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWSPSGKLLAT 91
V G P S S D T+ +W + K LE M H + +SP +++A+
Sbjct: 349 VRGQGPERLVSGSDDFTLFLWRPAED------KKPLERMTGHQALINQVLFSPDTRIIAS 402
Query: 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151
ASFD + +WE G Y + +L GH + V ++W+A LL + D ++ +W+
Sbjct: 403 ASFDKSIKLWEGRTGKY--LTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDA---- 456
Query: 152 EFECVSV-LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
E + +++ L GHA +V W P + S D +++W
Sbjct: 457 ETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 123 (48.4 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 39/157 (24%), Positives = 74/157 (47%)
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
D ++++W P + + + + GH + V + P ++ S S+D +IK+W
Sbjct: 363 DFTLFLWR--PAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGR----- 415
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258
S GH S ++ ++++A LVS S D T+K+W A+ T+ + D
Sbjct: 416 ----TGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAE-TKKLAID------ 464
Query: 259 HLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 294
+ G+ D +F+ WS +G +ASG D ++ +
Sbjct: 465 ----LPGHADE-VFATDWSPDGQRVASGGKDKCLRIW 496
Score = 115 (45.5 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+ L GH+ + L W+P ++ AS S D ++RIW+ + R C +L HT
Sbjct: 206 RVLTGHSKWITCLCWEPLH-INPECRYLASASKDGSIRIWD-TLMGR---CDKILTG-HT 259
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
++V W G LL ++S D T +W G C TL+GH + V +++
Sbjct: 260 QSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGIL-C-RTLQGHAHWVNTMA 307
Score = 84 (34.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 24/91 (26%), Positives = 47/91 (51%)
Query: 258 RHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKMLLKKEK 315
++L ++ G H ++ + WS + ++ SG++D +++ + E+K ID P
Sbjct: 418 KYLTSLRG-HVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPG--------- 467
Query: 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H +V + WSP +R+ AS D ++IW
Sbjct: 468 -HADEVFATDWSPDGQRV-ASGGKDKCLRIW 496
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 281 (104.0 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 106/363 (29%), Positives = 163/363 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
+LEGH++ V S+A+ PT AS SGD TVR W+ S + + C+ H
Sbjct: 110 SLEGHSEAVISVAFSPTG------KYLASGSGDTTVRFWDLSTETPHFTCQG-----HRH 158
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V S +WSP GK LA+ + +W+ G + L GH + ++SW N
Sbjct: 159 WVLSISWSPDGKKLASGCKNGQILLWDPSTGK-QVGRALTGHSKWITALSWEPLHANPEC 217
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+A+ +D SV +W+ G C L GHAQ V ++W +L+S S D TIKVW
Sbjct: 218 RYVASSSKDGSVRVWDTTAGR---CERTLTGHAQSVTCLRWGGD-GLLYSASQDRTIKVW 273
Query: 191 WAED-----TDSDNWHCVQTISESNNGHSSTIWAL-----SFNAKG--DKLVSCSDDLTI 238
A D T + H V T++ S + ++ A S NA+ L +
Sbjct: 274 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLRGSLQELKERALS 332
Query: 239 K---IWGADITRMQSG-DGYAS--W------RHLCTISGYHDRTIFSVHWSREG-IIASG 285
+ + G R+ SG D + W + L ++G H I V +S + +IAS
Sbjct: 333 RYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTG-HQALINQVVFSPDSRVIASA 391
Query: 286 AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKI 345
+ D S++ + DG + K L + H V + WS + RLL S S D +K+
Sbjct: 392 SFDKSIKLW--------DGRTGKYLASL-RGHVAAVYQIAWS-ADSRLLVSGSSDSTLKV 441
Query: 346 WEL 348
W++
Sbjct: 442 WDV 444
Score = 229 (85.7 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 91/313 (29%), Positives = 146/313 (46%)
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
C + LE H+ V S A+SP+GK LA+ S D T W D+ + T +GH + V S+
Sbjct: 107 CTSSLEG-HSEAVISVAFSPTGKYLASGSGDTTVRFW-DLSTETPHF-TCQGHRHWVLSI 163
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW---H--PTMDVLF 179
SW+ G LA+ ++ + +W+ G + L GH++ + + W H P +
Sbjct: 164 SWSPDGKKLASGCKNGQILLWDPSTGKQVG--RALTGHSKWITALSWEPLHANPECRYVA 221
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S S D +++VW DT + C +T++ GH+ ++ L + G L S S D TIK
Sbjct: 222 SSSKDGSVRVW---DTTAGR--CERTLT----GHAQSVTCLRWGGDG-LLYSASQDRTIK 271
Query: 240 IWGA-DITRMQSGDGYASWRHLCTIS-GYHDRTIFSVHWSREGIIASGAADDSVQFFVE- 296
+W A D ++ G+ W + +S Y RT E + + S+Q E
Sbjct: 272 VWRAHDGVLCRTLQGHGHWVNTMALSTDYALRT--GAFEPAEASVNAQDLRGSLQELKER 329
Query: 297 --SKDDLI--DGPS--------YKMLL------KKEKA----HDMDVNSVQWSPGERRLL 334
S+ +L+ GP + + L KK A H +N V +SP + R++
Sbjct: 330 ALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSP-DSRVI 388
Query: 335 ASASDDGMIKIWE 347
ASAS D IK+W+
Sbjct: 389 ASASFDKSIKLWD 401
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 35 VDGVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWSPSGKLLAT 91
V G P S S D T+ +W + K L M H + +SP +++A+
Sbjct: 337 VRGQGPERLVSGSDDFTLFLWSPAED------KKPLARMTGHQALINQVVFSPDSRVIAS 390
Query: 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151
ASFD + +W+ G Y +A+L GH V ++W+A LL + D ++ +W+V
Sbjct: 391 ASFDKSIKLWDGRTGKY--LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ- 447
Query: 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ + L GHA +V V W P + S D +++W
Sbjct: 448 --KLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 123 (48.4 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 38/157 (24%), Positives = 77/157 (49%)
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
D ++++W P + + ++ + GH + V + P V+ S S+D +IK+W D
Sbjct: 351 DFTLFLWS--PAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLW-----DGR 403
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258
+ ++ GH + ++ ++++A LVS S D T+K+W ++ S D
Sbjct: 404 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL-STD------ 452
Query: 259 HLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 294
+ G+ D +++V WS +G +ASG D ++ +
Sbjct: 453 ----LPGHADE-VYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 113 (44.8 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+ L GH+ + +L+W+P V AS S D +VR+W+ +A C+ L H
Sbjct: 194 RALTGHSKWITALSWEPLHANPECRYV-ASSSKDGSVRVWDTTAG----RCERTLTG-HA 247
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
++V W G LL +AS D T +W G C TL+GH + V +++
Sbjct: 248 QSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVL-C-RTLQGHGHWVNTMA 295
Score = 81 (33.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKM 309
DG ++L ++ G H ++ + WS + ++ SG++D +++ + V+++ D P
Sbjct: 401 DGRTG-KYLASLRG-HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPG--- 455
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H +V +V WSP +R+ AS D ++IW
Sbjct: 456 -------HADEVYAVDWSPDGQRV-ASGGKDKCLRIW 484
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 263 (97.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 96/346 (27%), Positives = 151/346 (43%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V + + P V V S S D T+++W+ K
Sbjct: 100 EKYALSGHRSPVTRVIFHP------VFSVIVSASEDATIKVWDHETGDFERTLKG----- 148
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT +V+ ++ +GKLLA+ S D T +W+ G +EC+ T+ GH++ V SV+ +G
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + RDK++ +WEV G CV GH + V+MV+ + ++ S S D T++VW
Sbjct: 207 IVSASRDKTIKMWEVATGY---CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVV 263
Query: 193 EDTDS-----DNWHCVQTISES-NNGHSSTIWALSFNAK-----GDKLVSCSDDLTIKIW 241
+ ++ H V+ IS + + H + + A K G L+S S D TIK+W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDL 301
I G L T+ G HD + V G ADD + K+
Sbjct: 324 DVSI-------GMC----LMTLVG-HDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKN-- 369
Query: 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K K AH+ V S+ + + + S D +K+WE
Sbjct: 370 ------KRCTKTLSAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
Score = 252 (93.8 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 75/280 (26%), Positives = 124/280 (44%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V + P ++ +AS DAT +W+ GD+E TL+GH + V+ +S++ +G L
Sbjct: 107 HRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFE--RTLKGHTDSVQDISFDHTGKL 164
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+C D ++ +W+ G FEC+ + GH +V V P D + S S D TIK+W
Sbjct: 165 LASCSADMTIKLWDFQ-G--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW-- 219
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
+ +CV+T + GH + + N G + S S+D T+++W T+ +
Sbjct: 220 ---EVATGYCVKTFT----GHREWVRMVRPNQDGTLIASSSNDQTVRVWVV-ATKECKAE 271
Query: 253 GYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLID--GPSYKML 310
H+ + + G + S+D I S M
Sbjct: 272 -LREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMC 330
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
L HD V V PG + ++ S +DD ++IW+ N
Sbjct: 331 LMTLVGHDNWVRGVLVHPGGKYIV-SCADDKTLRIWDYKN 369
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 262 (97.3 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 67/229 (29%), Positives = 115/229 (50%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E+ TL GH+ + SL++ T+G + F D TV +WE + +
Sbjct: 211 EVFTLTGHSAEIISLSFN-TSGNRIITGSF-----DHTVTVWEADTGRKVYTLIG----- 259
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + S ++ L+ T S D T +W+ V G +CVATL GH++E+ ++ +G L
Sbjct: 260 HCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG--KCVATLTGHDDEILDSCFDYTGKL 317
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+AT D + I+ ECV+ L+GH ++ + ++P + L + S D T ++W
Sbjct: 318 IATASADGTARIFSAATR---ECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW-- 372
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D+ C+Q + GH+ I++ +FN KGD +++ S D T +IW
Sbjct: 373 ---DAQTGQCLQVLE----GHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 243 (90.6 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 72/248 (29%), Positives = 119/248 (47%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E+ TLEGH + V+++A+ G D +A + S DKT ++W + +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYG-DKIA----TGSFDKTCKLWSVETGKCYHTFRG----- 175
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT + +++P L+AT S D T +W+ G E V TL GH E+ S+S+N SG
Sbjct: 176 HTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG--EEVFTLTGHSAEIISLSFNTSGNR 233
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ T D +V +WE G + V L GH ++ ++ ++ + S D T K+W
Sbjct: 234 IITGSFDHTVTVWEADTGRK---VYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLW-- 288
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD----ITRM 248
D+ N CV T++ GH I F+ G + + S D T +I+ A +T++
Sbjct: 289 ---DAVNGKCVATLT----GHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKL 341
Query: 249 QSGDGYAS 256
+ +G S
Sbjct: 342 EGHEGEIS 349
Score = 224 (83.9 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 58/193 (30%), Positives = 100/193 (51%)
Query: 56 QSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE 115
Q ++ +F+ K + H + + A + SG T S+D T +W+ G E + TLE
Sbjct: 76 QHSNHKFYLFKVL--RAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASG--EELHTLE 131
Query: 116 GHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
GH N V ++++N G +AT DK+ +W V G +C +GH ++ + ++P
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG---KCYHTFRGHTAEIVCLSFNPQ 188
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
++ + S D T K+W D + V T++ GHS+ I +LSFN G+++++ S
Sbjct: 189 STLVATGSMDTTAKLW-----DIQSGEEVFTLT----GHSAEIISLSFNTSGNRIITGSF 239
Query: 235 DLTIKIWGADITR 247
D T+ +W AD R
Sbjct: 240 DHTVTVWEADTGR 252
Score = 223 (83.6 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 56/179 (31%), Positives = 90/179 (50%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R++ TL GH + S + + + S DKT ++W+ + + + C A L
Sbjct: 252 RKVYTLIGHCAEISSAVFNWDCSL------ILTGSMDKTCKLWD-AVNGK---CVATLTG 301
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
+ SC + +GKL+ATAS D T I+ ECV LEGHE E+ +S+N G
Sbjct: 302 HDDEILDSC-FDYTGKLIATASADGTARIFS--AATRECVTKLEGHEGEISKISFNPQGN 358
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L T DK+ IW+ G +C+ VL+GH ++ ++ D++ + S DNT ++W
Sbjct: 359 RLLTGSSDKTARIWDAQTG---QCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 210 (79.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 66/224 (29%), Positives = 114/224 (50%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNASGT 131
H+ + S +++ SG + T SFD T +WE D G V TL GH E+ S +N +
Sbjct: 218 HSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK---VYTLIGHCAEISSAVFNWDCS 274
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L+ T DK+ +W+ + G +CV+ L GH ++ + T ++ + S D T +++
Sbjct: 275 LILTGSMDKTCKLWDAVNG---KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251
A + CV + GH I +SFN +G++L++ S D T +IW A Q+G
Sbjct: 332 AATRE-----CVTKLE----GHEGEISKISFNPQGNRLLTGSSDKTARIWDA-----QTG 377
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294
+ L + G+ D IFS ++ +G II +G+ D++ + +
Sbjct: 378 ------QCLQVLEGHTDE-IFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 52/181 (28%), Positives = 88/181 (48%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS-PSGKLLATASFDATTCI 100
F + S D+T ++W+ ++ E H V + A++ P G +AT SFD T +
Sbjct: 107 FITGSYDRTCKLWDTASGEELHTL-----EGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W G +C T GH E+ +S+N TL+AT D + +W++ G E V L
Sbjct: 162 WSVETG--KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEE---VFTLT 216
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW----HCVQTISESNNGHSST 216
GH+ ++ + ++ + + + + S+D+T+ VW A DT + HC + S N S
Sbjct: 217 GHSAEIISLSFNTSGNRIITGSFDHTVTVWEA-DTGRKVYTLIGHCAEISSAVFNWDCSL 275
Query: 217 I 217
I
Sbjct: 276 I 276
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/234 (30%), Positives = 114/234 (48%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL GHT V S+ + P AS S DK ++IW + +F K
Sbjct: 34 NYALKF--TLAGHTKAVSSVKFSPNG------EWLASSSADKLIKIWG-AYDGKFE--KT 82
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ H + AWS LL +AS D T IW+ G +C+ TL+GH N V ++N
Sbjct: 83 I--SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFN 138
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D+SV IW+V G +C+ L H+ V V ++ ++ S SYD
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W DT S C++T+ + +N S + F+ G +++ + D T+K+W
Sbjct: 196 RIW---DTASGQ--CLKTLIDDDNPPVSFV---KFSPNGKYILAATLDNTLKLW 241
Score = 204 (76.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +T+ GH + +AW + + S S DKT++IW+ S+ C
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIWDVSSGK----CL 122
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H+ V C ++P L+ + SFD + IW+ G +C+ TL H + V +V +
Sbjct: 123 KTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHF 179
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDN 185
N G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 186 TIKVW 190
T+K+W
Sbjct: 237 TLKLW 241
Score = 184 (69.8 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 49/151 (32%), Positives = 75/151 (49%)
Query: 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150
T S AT V +Y TL GH V SV ++ +G LA+ DK + IW G
Sbjct: 18 TPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
+FE + GH + V W ++L S S D T+K+W D S C++T+
Sbjct: 78 -KFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW---DVSSGK--CLKTLK--- 126
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GHS+ ++ +FN + + +VS S D +++IW
Sbjct: 127 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 176 (67.0 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 56/182 (30%), Positives = 87/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++ + DG + S S D RIW+ +AS + C L +
Sbjct: 164 LKTLPAHSDPVSAVHFNR----DG--SLIVSSSYDGLCRIWD-TASGQ---CLKTLIDDD 213
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + A+ D T +W+ G +C+ T GH+NE + N S G
Sbjct: 214 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
+ + D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 272 KWIVSGSEDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIK 328
Query: 189 VW 190
+W
Sbjct: 329 LW 330
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/210 (22%), Positives = 94/210 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++VRIW+ C L H+ V + ++ G L+ ++S+D I
Sbjct: 143 LIVSGSFDESVRIWDVKTGK----CLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL +N V V ++ +G + D ++ +W+ G +C+
Sbjct: 198 WDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTY 252
Query: 160 QGHAQDVKMV--QWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
GH + + + T + S S DN + +W + + VQ + GH+
Sbjct: 253 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-----IVQKLQ----GHTDV 303
Query: 217 IWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + + S + +D TIK+W +D
Sbjct: 304 VISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 47 (21.6 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGY 254
D C++T + N I+A +F+ G K +VS S+D + IW +
Sbjct: 242 DYSKGKCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ---- 295
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289
+ G+ D I + E IIAS A ++
Sbjct: 296 -------KLQGHTDVVISTACHPTENIIASAALEN 323
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/234 (30%), Positives = 114/234 (48%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL GHT V S+ + P AS S DK ++IW + +F K
Sbjct: 34 NYALKF--TLAGHTKAVSSVKFSPNG------EWLASSSADKLIKIWG-AYDGKFE--KT 82
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ H + AWS LL +AS D T IW+ G +C+ TL+GH N V ++N
Sbjct: 83 I--SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFN 138
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D+SV IW+V G +C+ L H+ V V ++ ++ S SYD
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W DT S C++T+ + +N S + F+ G +++ + D T+K+W
Sbjct: 196 RIW---DTASGQ--CLKTLIDDDNPPVSFV---KFSPNGKYILAATLDNTLKLW 241
Score = 204 (76.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +T+ GH + +AW + + S S DKT++IW+ S+ C
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIWDVSSGK----CL 122
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H+ V C ++P L+ + SFD + IW+ G +C+ TL H + V +V +
Sbjct: 123 KTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHF 179
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDN 185
N G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 186 TIKVW 190
T+K+W
Sbjct: 237 TLKLW 241
Score = 184 (69.8 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 49/151 (32%), Positives = 75/151 (49%)
Query: 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150
T S AT V +Y TL GH V SV ++ +G LA+ DK + IW G
Sbjct: 18 TPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
+FE + GH + V W ++L S S D T+K+W D S C++T+
Sbjct: 78 -KFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW---DVSSGK--CLKTLK--- 126
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GHS+ ++ +FN + + +VS S D +++IW
Sbjct: 127 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 176 (67.0 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 56/182 (30%), Positives = 87/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++ + DG + S S D RIW+ +AS + C L +
Sbjct: 164 LKTLPAHSDPVSAVHFNR----DG--SLIVSSSYDGLCRIWD-TASGQ---CLKTLIDDD 213
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + A+ D T +W+ G +C+ T GH+NE + N S G
Sbjct: 214 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
+ + D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 272 KWIVSGSEDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIK 328
Query: 189 VW 190
+W
Sbjct: 329 LW 330
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/210 (22%), Positives = 94/210 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++VRIW+ C L H+ V + ++ G L+ ++S+D I
Sbjct: 143 LIVSGSFDESVRIWDVKTGK----CLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL +N V V ++ +G + D ++ +W+ G +C+
Sbjct: 198 WDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTY 252
Query: 160 QGHAQDVKMV--QWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
GH + + + T + S S DN + +W + + VQ + GH+
Sbjct: 253 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-----IVQKLQ----GHTDV 303
Query: 217 IWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + + S + +D TIK+W +D
Sbjct: 304 VISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 47 (21.6 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGY 254
D C++T + N I+A +F+ G K +VS S+D + IW +
Sbjct: 242 DYSKGKCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ---- 295
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289
+ G+ D I + E IIAS A ++
Sbjct: 296 -------KLQGHTDVVISTACHPTENIIASAALEN 323
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/234 (30%), Positives = 114/234 (48%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL GHT V S+ + P AS S DK ++IW + +F K
Sbjct: 34 NYALKF--TLAGHTKAVSSVKFSPNG------EWLASSSADKLIKIWG-AYDGKFE--KT 82
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ H + AWS LL +AS D T IW+ G +C+ TL+GH N V ++N
Sbjct: 83 I--SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFN 138
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D+SV IW+V G +C+ L H+ V V ++ ++ S SYD
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W DT S C++T+ + +N S + F+ G +++ + D T+K+W
Sbjct: 196 RIW---DTASGQ--CLKTLIDDDNPPVSFV---KFSPNGKYILAATLDNTLKLW 241
Score = 204 (76.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +T+ GH + +AW + + S S DKT++IW+ S+ C
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIWDVSSGK----CL 122
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H+ V C ++P L+ + SFD + IW+ G +C+ TL H + V +V +
Sbjct: 123 KTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHF 179
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDN 185
N G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 186 TIKVW 190
T+K+W
Sbjct: 237 TLKLW 241
Score = 184 (69.8 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 49/151 (32%), Positives = 75/151 (49%)
Query: 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150
T S AT V +Y TL GH V SV ++ +G LA+ DK + IW G
Sbjct: 18 TPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
+FE + GH + V W ++L S S D T+K+W D S C++T+
Sbjct: 78 -KFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW---DVSSGK--CLKTLK--- 126
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GHS+ ++ +FN + + +VS S D +++IW
Sbjct: 127 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 176 (67.0 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 56/182 (30%), Positives = 87/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++ + DG + S S D RIW+ +AS + C L +
Sbjct: 164 LKTLPAHSDPVSAVHFNR----DG--SLIVSSSYDGLCRIWD-TASGQ---CLKTLIDDD 213
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + A+ D T +W+ G +C+ T GH+NE + N S G
Sbjct: 214 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
+ + D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 272 KWIVSGSEDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIK 328
Query: 189 VW 190
+W
Sbjct: 329 LW 330
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/210 (22%), Positives = 94/210 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++VRIW+ C L H+ V + ++ G L+ ++S+D I
Sbjct: 143 LIVSGSFDESVRIWDVKTGK----CLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL +N V V ++ +G + D ++ +W+ G +C+
Sbjct: 198 WDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTY 252
Query: 160 QGHAQDVKMV--QWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
GH + + + T + S S DN + +W + + VQ + GH+
Sbjct: 253 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-----IVQKLQ----GHTDV 303
Query: 217 IWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + + S + +D TIK+W +D
Sbjct: 304 VISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 47 (21.6 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGY 254
D C++T + N I+A +F+ G K +VS S+D + IW +
Sbjct: 242 DYSKGKCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ---- 295
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289
+ G+ D I + E IIAS A ++
Sbjct: 296 -------KLQGHTDVVISTACHPTENIIASAALEN 323
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/234 (30%), Positives = 114/234 (48%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL GHT V S+ + P AS S DK ++IW + +F K
Sbjct: 34 NYALKF--TLAGHTKAVSSVKFSPNG------EWLASSSADKLIKIWG-AYDGKFE--KT 82
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ H + AWS LL +AS D T IW+ G +C+ TL+GH N V ++N
Sbjct: 83 I--SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFN 138
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D+SV IW+V G +C+ L H+ V V ++ ++ S SYD
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W DT S C++T+ + +N S + F+ G +++ + D T+K+W
Sbjct: 196 RIW---DTASGQ--CLKTLIDDDNPPVSFV---KFSPNGKYILAATLDNTLKLW 241
Score = 204 (76.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +T+ GH + +AW + + S S DKT++IW+ S+ C
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIWDVSSGK----CL 122
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H+ V C ++P L+ + SFD + IW+ G +C+ TL H + V +V +
Sbjct: 123 KTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHF 179
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDN 185
N G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 186 TIKVW 190
T+K+W
Sbjct: 237 TLKLW 241
Score = 184 (69.8 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 49/151 (32%), Positives = 75/151 (49%)
Query: 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150
T S AT V +Y TL GH V SV ++ +G LA+ DK + IW G
Sbjct: 18 TPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
+FE + GH + V W ++L S S D T+K+W D S C++T+
Sbjct: 78 -KFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW---DVSSGK--CLKTLK--- 126
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GHS+ ++ +FN + + +VS S D +++IW
Sbjct: 127 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 176 (67.0 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 56/182 (30%), Positives = 87/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++ + DG + S S D RIW+ +AS + C L +
Sbjct: 164 LKTLPAHSDPVSAVHFNR----DG--SLIVSSSYDGLCRIWD-TASGQ---CLKTLIDDD 213
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + A+ D T +W+ G +C+ T GH+NE + N S G
Sbjct: 214 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
+ + D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 272 KWIVSGSEDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIK 328
Query: 189 VW 190
+W
Sbjct: 329 LW 330
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/210 (22%), Positives = 94/210 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++VRIW+ C L H+ V + ++ G L+ ++S+D I
Sbjct: 143 LIVSGSFDESVRIWDVKTGK----CLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL +N V V ++ +G + D ++ +W+ G +C+
Sbjct: 198 WDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTY 252
Query: 160 QGHAQDVKMV--QWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
GH + + + T + S S DN + +W + + VQ + GH+
Sbjct: 253 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-----IVQKLQ----GHTDV 303
Query: 217 IWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + + S + +D TIK+W +D
Sbjct: 304 VISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 47 (21.6 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGY 254
D C++T + N I+A +F+ G K +VS S+D + IW +
Sbjct: 242 DYSKGKCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ---- 295
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289
+ G+ D I + E IIAS A ++
Sbjct: 296 -------KLQGHTDVVISTACHPTENIIASAALEN 323
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/234 (30%), Positives = 114/234 (48%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL GHT V S+ + P AS S DK ++IW + +F K
Sbjct: 8 NYALKF--TLAGHTKAVSSVKFSPNG------EWLASSSADKLIKIWG-AYDGKFE--KT 56
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ H + AWS LL +AS D T IW+ G +C+ TL+GH N V ++N
Sbjct: 57 I--SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFN 112
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D+SV IW+V G +C+ L H+ V V ++ ++ S SYD
Sbjct: 113 PQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 169
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W DT S C++T+ + +N S + F+ G +++ + D T+K+W
Sbjct: 170 RIW---DTASGQ--CLKTLIDDDNPPVSFV---KFSPNGKYILAATLDNTLKLW 215
Score = 204 (76.9 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +T+ GH + +AW + + S S DKT++IW+ S+ C
Sbjct: 47 GAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIWDVSSGK----CL 96
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H+ V C ++P L+ + SFD + IW+ G +C+ TL H + V +V +
Sbjct: 97 KTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHF 153
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDN 185
N G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 154 NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 210
Query: 186 TIKVW 190
T+K+W
Sbjct: 211 TLKLW 215
Score = 176 (67.0 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 56/182 (30%), Positives = 87/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++ + DG + S S D RIW+ +AS + C L +
Sbjct: 138 LKTLPAHSDPVSAVHFNR----DG--SLIVSSSYDGLCRIWD-TASGQ---CLKTLIDDD 187
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + A+ D T +W+ G +C+ T GH+NE + N S G
Sbjct: 188 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGG 245
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
+ + D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 246 KWIVSGSEDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIK 302
Query: 189 VW 190
+W
Sbjct: 303 LW 304
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 48/210 (22%), Positives = 94/210 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++VRIW+ C L H+ V + ++ G L+ ++S+D I
Sbjct: 117 LIVSGSFDESVRIWDVKTGK----CLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRI 171
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL +N V V ++ +G + D ++ +W+ G +C+
Sbjct: 172 WDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTY 226
Query: 160 QGHAQDVKMV--QWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
GH + + + T + S S DN + +W + + VQ + GH+
Sbjct: 227 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-----IVQKLQ----GHTDV 277
Query: 217 IWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + + S + +D TIK+W +D
Sbjct: 278 VISTACHPTENIIASAALENDKTIKLWKSD 307
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 67/265 (25%), Positives = 111/265 (41%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
+Y TL GH V SV ++ +G LA+ DK + IW G +FE + GH +
Sbjct: 8 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFE--KTISGHKLGI 64
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAED-------TDSDNW-HCVQTISESN---NG--- 212
V W ++L S S D T+K+W N+ C +SN +G
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 124
Query: 213 HSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG--DGY------ASWRHLCTIS 264
S IW + L + SD ++ + D + + S DG AS + L T+
Sbjct: 125 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 184
Query: 265 GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323
+ + V +S G I + D++++ + SK + +Y K EK + + N
Sbjct: 185 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK--TYTGH-KNEK-YCIFAN- 239
Query: 324 VQWSPGERRLLASASDDGMIKIWEL 348
+S + + S S+D ++ IW L
Sbjct: 240 --FSVTGGKWIVSGSEDNLVYIWNL 262
Score = 47 (21.6 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGY 254
D C++T + N I+A +F+ G K +VS S+D + IW +
Sbjct: 216 DYSKGKCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ---- 269
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289
+ G+ D I + E IIAS A ++
Sbjct: 270 -------KLQGHTDVVISTACHPTENIIASAALEN 297
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/234 (30%), Positives = 114/234 (48%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL GHT V S+ + P AS S DK ++IW + +F K
Sbjct: 34 NYALKF--TLAGHTKAVSSVKFSPNG------EWLASSSADKLIKIWG-AYDGKFE--KT 82
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ H + AWS LL +AS D T IW+ G +C+ TL+GH N V ++N
Sbjct: 83 I--SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFN 138
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D+SV IW+V G +C+ L H+ V V ++ ++ S SYD
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W DT S C++T+ + +N S + F+ G +++ + D T+K+W
Sbjct: 196 RIW---DTASGQ--CLKTLIDDDNPPVSFV---KFSPNGKYILAATLDNTLKLW 241
Score = 204 (76.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +T+ GH + +AW + + S S DKT++IW+ S+ C
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIWDVSSGK----CL 122
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H+ V C ++P L+ + SFD + IW+ G +C+ TL H + V +V +
Sbjct: 123 KTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHF 179
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDN 185
N G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 186 TIKVW 190
T+K+W
Sbjct: 237 TLKLW 241
Score = 176 (67.0 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 56/182 (30%), Positives = 87/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++ + DG + S S D RIW+ +AS + C L +
Sbjct: 164 LKTLPAHSDPVSAVHFNR----DG--SLIVSSSYDGLCRIWD-TASGQ---CLKTLIDDD 213
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + A+ D T +W+ G +C+ T GH+NE + N S G
Sbjct: 214 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
+ + D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 272 KWIVSGSEDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIK 328
Query: 189 VW 190
+W
Sbjct: 329 LW 330
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/210 (22%), Positives = 94/210 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++VRIW+ C L H+ V + ++ G L+ ++S+D I
Sbjct: 143 LIVSGSFDESVRIWDVKTGK----CLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL +N V V ++ +G + D ++ +W+ G +C+
Sbjct: 198 WDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTY 252
Query: 160 QGHAQDVKMV--QWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
GH + + + T + S S DN + +W + + VQ + GH+
Sbjct: 253 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-----IVQKLQ----GHTDV 303
Query: 217 IWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + + S + +D TIK+W +D
Sbjct: 304 VISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 67/265 (25%), Positives = 111/265 (41%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
+Y TL GH V SV ++ +G LA+ DK + IW G +FE + GH +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFE--KTISGHKLGI 90
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAED-------TDSDNW-HCVQTISESN---NG--- 212
V W ++L S S D T+K+W N+ C +SN +G
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 213 HSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG--DGY------ASWRHLCTIS 264
S IW + L + SD ++ + D + + S DG AS + L T+
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 265 GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323
+ + V +S G I + D++++ + SK + +Y K EK + + N
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK--TYTGH-KNEK-YCIFAN- 265
Query: 324 VQWSPGERRLLASASDDGMIKIWEL 348
+S + + S S+D ++ IW L
Sbjct: 266 --FSVTGGKWIVSGSEDNLVYIWNL 288
Score = 47 (21.6 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGY 254
D C++T + N I+A +F+ G K +VS S+D + IW +
Sbjct: 242 DYSKGKCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ---- 295
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289
+ G+ D I + E IIAS A ++
Sbjct: 296 -------KLQGHTDVVISTACHPTENIIASAALEN 323
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/234 (30%), Positives = 114/234 (48%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL GHT V S+ + P AS S DK ++IW + +F K
Sbjct: 34 NYTLKF--TLAGHTKAVSSVKFSPNG------EWLASSSADKLIKIWG-AYDGKFE--KT 82
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ H + AWS LL +AS D T IW+ G +C+ TL+GH N V ++N
Sbjct: 83 I--SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFN 138
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D+SV IW+V G +C+ L H+ V V ++ ++ S SYD
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W DT S C++T+ + +N S + F+ G +++ + D T+K+W
Sbjct: 196 RIW---DTASGQ--CLKTLIDDDNPPVSFV---KFSPNGKYILAATLDNTLKLW 241
Score = 204 (76.9 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +T+ GH + +AW + + S S DKT++IW+ S+ C
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIWDVSSGK----CL 122
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H+ V C ++P L+ + SFD + IW+ G +C+ TL H + V +V +
Sbjct: 123 KTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHF 179
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDN 185
N G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 186 TIKVW 190
T+K+W
Sbjct: 237 TLKLW 241
Score = 167 (63.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 55/182 (30%), Positives = 86/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++ + DG + S S D RIW+ +AS + C L +
Sbjct: 164 LKTLPAHSDPVSAVHFNR----DG--SLIVSSSYDGLCRIWD-TASGQ---CLKTLIDDD 213
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + A+ D T +W+ G +C+ T H+NE + N S G
Sbjct: 214 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTCHKNEKYCIFANFSVTGG 271
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
+ + D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 272 KWIVSGSEDNLVYIWNLQTK---EVVQKLQGHTDVVISTACHPTENIIASAALENDKTIK 328
Query: 189 VW 190
+W
Sbjct: 329 LW 330
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 47/210 (22%), Positives = 93/210 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++VRIW+ C L H+ V + ++ G L+ ++S+D I
Sbjct: 143 LIVSGSFDESVRIWDVKTGK----CLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL +N V V ++ +G + D ++ +W+ G +C+
Sbjct: 198 WDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTY 252
Query: 160 QGHAQDVKMV--QWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
H + + + T + S S DN + +W + + VQ + GH+
Sbjct: 253 TCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-----VVQKLQ----GHTDV 303
Query: 217 IWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + + S + +D TIK+W +D
Sbjct: 304 VISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 122 (48.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 67/265 (25%), Positives = 111/265 (41%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
+Y TL GH V SV ++ +G LA+ DK + IW G +FE + GH +
Sbjct: 34 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFE--KTISGHKLGI 90
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAED-------TDSDNW-HCVQTISESN---NG--- 212
V W ++L S S D T+K+W N+ C +SN +G
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 213 HSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG--DGY------ASWRHLCTIS 264
S IW + L + SD ++ + D + + S DG AS + L T+
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 265 GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323
+ + V +S G I + D++++ + SK + +Y K EK + + N
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK--TYTCH-KNEK-YCIFAN- 265
Query: 324 VQWSPGERRLLASASDDGMIKIWEL 348
+S + + S S+D ++ IW L
Sbjct: 266 --FSVTGGKWIVSGSEDNLVYIWNL 288
Score = 46 (21.3 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGY 254
D C++T + N I+A +F+ G K +VS S+D + IW +Q+ +
Sbjct: 242 DYSKGKCLKTYTCHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWN-----LQTKEVV 294
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289
+ G+ D I + E IIAS A ++
Sbjct: 295 QK------LQGHTDVVISTACHPTENIIASAALEN 323
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 261 (96.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 77/252 (30%), Positives = 112/252 (44%)
Query: 6 DGNYELRE--IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
D N E+ E + L GH V+ AW P+ + AS SGD T RIW+ S ++
Sbjct: 338 DENIEIPESKARVLRGHESEVFICAWNPSRDL------LASGSGDSTARIWDMSDANTNS 391
Query: 64 N------C--KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE 115
N C K E + V S W+ G LLAT S+D IW+ G +TL
Sbjct: 392 NQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDG---RLASTLG 448
Query: 116 GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175
H+ + ++ WN G + + G DK+ IW+ G +C H+ V W T
Sbjct: 449 QHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTG---QCTQQFAFHSAPALDVDWQ-TN 504
Query: 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235
SCS D I V + ++T GH++ + A+ + +G L SCSDD
Sbjct: 505 QAFASCSTDQRIHVCRLGVNEP-----IKTFK----GHTNEVNAIKWCPQGQLLASCSDD 555
Query: 236 LTIKIWGADITR 247
+T+KIW + R
Sbjct: 556 MTLKIWSMNRDR 567
Score = 224 (83.9 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 75/290 (25%), Positives = 127/290 (43%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R TL H +++L W S DKT IW+ S C
Sbjct: 442 RLASTLGQHKGPIFALKWNKCGNY------ILSAGVDKTTIIWDASTGQ----CTQQFA- 490
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H+ W + + A+ S D + +G + E + T +GH NEV ++ W G
Sbjct: 491 FHSAPALDVDWQ-TNQAFASCSTDQRIHVCR-LGVN-EPIKTFKGHTNEVNAIKWCPQGQ 547
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCS 182
LLA+C D ++ IW + N C LQ H++++ ++W PT +L S S
Sbjct: 548 LLASCSDDMTLKIWSM---NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASAS 604
Query: 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242
+D+T+++W D + C+ T+++ H+ +++++F+ G L S S D + IW
Sbjct: 605 FDSTVRLW-----DVERGSCIHTLTK----HTEPVYSVAFSPDGKHLASGSFDKCVHIWS 655
Query: 243 ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
Q+G S++ G IF V W+ +G + + A+D SV
Sbjct: 656 T-----QTGQLVHSYKGT---GG-----IFEVCWNSKGTKVGASASDGSV 692
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 17 LEGHTDRVWSLAWKPTA-GVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
L+ H+ ++++ W PT G + + AS S D TVR+W+ S C L + H
Sbjct: 572 LQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGS----CIHTLTK-H 626
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
T V S A+SP GK LA+ SFD IW G + V + +G + V WN+ GT +
Sbjct: 627 TEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTG--QLVHSYKG-TGGIFEVCWNSKGTKV 683
Query: 134 ATCGRDKSVWIWEV 147
D SV++ ++
Sbjct: 684 GASASDGSVFVLDL 697
Score = 163 (62.4 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 70/298 (23%), Positives = 120/298 (40%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE--DVGGDYE------CVAT--LE 115
KA + H V CAW+PS LLA+ S D+T IW+ D + C+ E
Sbjct: 347 KARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAE 406
Query: 116 GHEN-EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
N +V S+ WN G+LLAT D IW+ + S L H + ++W+
Sbjct: 407 VPSNKDVTSLDWNCDGSLLATGSYDGYARIWKT----DGRLASTLGQHKGPIFALKWNKC 462
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+ + S D T +W D+ C Q + HS+ + + SCS
Sbjct: 463 GNYILSAGVDKTTIIW-----DASTGQCTQQFAF----HSAPALDVDWQTN-QAFASCST 512
Query: 235 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQF 293
D I + + + T G H + ++ W +G + + +DD +++
Sbjct: 513 DQRIHVCRLGVNEP-----------IKTFKG-HTNEVNAIKWCPQGQLLASCSDDMTLKI 560
Query: 294 FVESKDDL---IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ ++D + S ++ K N+ P +LASAS D +++W++
Sbjct: 561 WSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNN----PNTNLILASASFDSTVRLWDV 614
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/227 (26%), Positives = 92/227 (40%)
Query: 83 SPSGKLLATASFDATT---CIWEDVGGDYEC----VATLEGHENEVKSVSWNASGTLLAT 135
+PSG + ++ S A T + D+ + E L GHE+EV +WN S LLA+
Sbjct: 313 APSGTISSSTSGGAGTPAALVPMDIDENIEIPESKARVLRGHESEVFICAWNPSRDLLAS 372
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQ-----GHAQ-----DVKMVQWHPTMDVLFSCSYDN 185
D + IW++ N VL+ G A+ DV + W+ +L + SYD
Sbjct: 373 GSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDG 432
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245
++W TD T+ + H I+AL +N G+ ++S D T IW A
Sbjct: 433 YARIW---KTDG---RLASTLGQ----HKGPIFALKWNKCGNYILSAGVDKTTIIWDAS- 481
Query: 246 TRMQSGDGYASWRHLCTIS-GYHDRTIFSVHWSREGIIASGAADDSV 291
+G CT +H V W AS + D +
Sbjct: 482 ----TGQ--------CTQQFAFHSAPALDVDWQTNQAFASCSTDQRI 516
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 56/169 (33%), Positives = 91/169 (53%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H +++ S +SP GK LA+AS D T IW G +E TLEGH+ + ++W+ L
Sbjct: 45 HLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE--RTLEGHKEGISDIAWSQDSKL 102
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + DK++ IW+V G + V L+GH + V V ++P +++ S S+D +++W
Sbjct: 103 ICSASDDKTIKIWDVESG---KMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW-- 157
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D + C + IS HS + + FN G +VS S D T++IW
Sbjct: 158 ---DVNTGECTKMIS----AHSDPVTGVHFNRDGTLVVSGSYDGTVRIW 199
Score = 235 (87.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 70/218 (32%), Positives = 108/218 (49%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL+GH + S+ + P DG AS S DKT++IW + +F +
Sbjct: 35 NYILK--YTLKGHLKSISSVKFSP----DG--KWLASASADKTIKIWG-AYDGKF---ER 82
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
LE H + AWS KL+ +AS D T IW+ G + V TL+GH+ V VS+N
Sbjct: 83 TLEG-HKEGISDIAWSQDSKLICSASDDKTIKIWDVESG--KMVKTLKGHKEYVFGVSFN 139
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D++V IW+V G EC ++ H+ V V ++ ++ S SYD T+
Sbjct: 140 PQSNLIVSGSFDENVRIWDVNTG---ECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTV 196
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225
++W D+ + TIS + +G + S N K
Sbjct: 197 RIW-----DTTTGQLLNTIS-TEDGKEVSFVKFSPNGK 228
Score = 220 (82.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 61/235 (25%), Positives = 107/235 (45%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +TLEGH + + +AW + + S S DKT++IW+ + K
Sbjct: 74 GAYDGKFERTLEGHKEGISDIAWSQDS------KLICSASDDKTIKIWDVESGKMVKTLK 127
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
H V +++P L+ + SFD IW+ G EC + H + V V +
Sbjct: 128 G-----HKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTG--ECTKMISAHSDPVTGVHF 180
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
N GTL+ + D +V IW+ G +S G ++V V++ P + + + DNT
Sbjct: 181 NRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG--KEVSFVKFSPNGKFVLAGTLDNT 238
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+++W + ++N C++T + N S G +V+ S+D I I+
Sbjct: 239 LRLW----SYNNNKKCLKTYTGHKNEKYCIFSTFSVTC-GKWIVTGSEDNLIYIY 288
Score = 178 (67.7 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 42/129 (32%), Positives = 68/129 (52%)
Query: 113 TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172
TL+GH + SV ++ G LA+ DK++ IW G +FE L+GH + + + W
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDG-KFE--RTLEGHKEGISDIAWS 97
Query: 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232
++ S S D TIK+W D +S V+T+ GH ++ +SFN + + +VS
Sbjct: 98 QDSKLICSASDDKTIKIW---DVESGKM--VKTLK----GHKEYVFGVSFNPQSNLIVSG 148
Query: 233 SDDLTIKIW 241
S D ++IW
Sbjct: 149 SFDENVRIW 157
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGV----DGVAPVFASCSGDKTVRIWEQSASSR 61
D N + ++ T G ++ S P GV DG V S G TVRIW+ + + +
Sbjct: 151 DENVRIWDVNT--GECTKMISAHSDPVTGVHFNRDGTLVVSGSYDG--TVRIWD-TTTGQ 205
Query: 62 FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEV 121
N + + V+ +SP+GK + + D T +W + +C+ T GH+NE
Sbjct: 206 LLNTISTEDGKEVSFVK---FSPNGKFVLAGTLDNTLRLWS-YNNNKKCLKTYTGHKNEK 261
Query: 122 KSVSWNAS---GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
+ S G + T D ++I+ + E V L GH V V HPT +++
Sbjct: 262 YCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTR---EIVQTLAGHEDVVLTVACHPTENII 318
Query: 179 FSCSY--DNTIKVW 190
S + D ++K+W
Sbjct: 319 ASGALEKDRSVKIW 332
Score = 112 (44.5 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 31/91 (34%), Positives = 45/91 (49%)
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
L+GH + + V++ P L S S D TIK+W A D + +T+ G S W
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE-----RTLEGHKEGISDIAW 96
Query: 219 ALSFNAKGDKLV-SCSDDLTIKIWGADITRM 248
+ + KL+ S SDD TIKIW + +M
Sbjct: 97 S-----QDSKLICSASDDKTIKIWDVESGKM 122
Score = 79 (32.9 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 262 TISGYHDRTIFSVHWS-REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 320
T+ G H +F V ++ + +I SG+ D++V+ + D+ G KM+ AH
Sbjct: 125 TLKG-HKEYVFGVSFNPQSNLIVSGSFDENVRIW-----DVNTGECTKMI----SAHSDP 174
Query: 321 VNSVQWSPGERRLLASASDDGMIKIWE 347
V V ++ + L+ S S DG ++IW+
Sbjct: 175 VTGVHFNR-DGTLVVSGSYDGTVRIWD 200
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 201 (75.8 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 56/192 (29%), Positives = 89/192 (46%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS 60
+E+++ N + + HTD V+ + DG ASC DKT+++++
Sbjct: 597 LEWVNKKNMKNLSRLVVRPHTDAVYHACFSE----DGQR--IASCGADKTLQVFKAETGE 650
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120
+ KA H V CA+S K +AT S D IW + G E V + H +
Sbjct: 651 KLLEIKA-----HEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTG--ELVRIYDEHSEQ 703
Query: 121 VKSVSW--NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
V + N++ LLAT D + +W++ N+ EC + + GH V ++ P VL
Sbjct: 704 VNCCHFTNNSNHLLLATGSNDYFLKLWDL---NQEECRNTMFGHTNSVSHCRFSPDDQVL 760
Query: 179 FSCSYDNTIKVW 190
SCS D T+K+W
Sbjct: 761 ASCSADGTLKLW 772
Score = 171 (65.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 59/229 (25%), Positives = 102/229 (44%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK--LLATASFDATTCI 100
A+CS DK V+IW +S + +E H+ V C ++ + LLAT S D +
Sbjct: 675 ATCSVDKKVKIW----NSMTGELVRIYDE-HSEQVNCCHFTNNSNHLLLATGSNDYFLKL 729
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W D+ + EC T+ GH N V ++ +LA+C D ++ +W+V NE + ++V Q
Sbjct: 730 W-DLNQE-ECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKSINVKQ 787
Query: 161 GHAQDVKMVQWHPTMDVLFSC---SYDNT-IKVWWAEDTDSDNWHCVQTISESNNGHSST 216
+ + ++V+ C S D I V + H ++E + GH S
Sbjct: 788 FFLNSEEPQE---DLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHHSA 844
Query: 217 IWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD--GYASWRHLCTI 263
+ F+ V +++W D + ++ D G+ SW H C +
Sbjct: 845 VQYCDFSPHNHLAVVALSQYCVELWSMD-SGLKVADCRGHLSWVH-CVM 891
Score = 166 (63.5 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 49/180 (27%), Positives = 84/180 (46%)
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
N ++ HT V +S G+ +A+ D T +++ G E + ++ HE+EV
Sbjct: 607 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETG--EKLLEIKAHEDEVLC 664
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSC 181
+++A +ATC DK V IW M G E V + H++ V + + +L +
Sbjct: 665 CAFSADDKFIATCSVDKKVKIWNSMTG---ELVRIYDEHSEQVNCCHFTNNSNHLLLATG 721
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D +K+W D + C T+ GH++++ F+ L SCS D T+K+W
Sbjct: 722 SNDYFLKLW-----DLNQEECRNTMF----GHTNSVSHCRFSPDDQVLASCSADGTLKLW 772
Score = 124 (48.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 45/212 (21%), Positives = 90/212 (42%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ A+ S D +++W+ + C+ + HT +V C +SP ++LA+ S D T +
Sbjct: 717 LLATGSNDYFLKLWDLNQEE----CRNTMFG-HTNSVSHCRFSPDDQVLASCSADGTLKL 771
Query: 101 WE-DVGGDYECVAT----LEGHENE------VKSVSWNASGTLLATCGRDKSVWIWEVMP 149
W+ + + + L E + VK SW+A G + ++K V+++++
Sbjct: 772 WDVKSANERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNK-VFLFDIHS 830
Query: 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209
+ GH V+ + P + +++W + D+ C
Sbjct: 831 SGLL--AEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELW-SMDSGLKVADC------- 880
Query: 210 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH S + + F+ G ++ SDD TI++W
Sbjct: 881 -RGHLSWVHCVMFSPDGSSFLTSSDDQTIRLW 911
Score = 120 (47.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 45/169 (26%), Positives = 68/169 (40%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V C SP + LA D I E + + GH+ V+ + + A G L +
Sbjct: 966 VSCCCLSPHLQYLAFGGEDGAIQILELLNN--RIFQSRNGHKTTVRHIQFTADGKTLISS 1023
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D +V IW + F LQ H + VK + +L S S+D T+KVW
Sbjct: 1024 SDDSAVQIWNWQSEDPF----FLQAHQETVKDFRLLKNSRLL-SWSFDGTVKVW------ 1072
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245
N + I + H T+ + ++ K S S D T KIW ++
Sbjct: 1073 --NI-ITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFEL 1118
Score = 95 (38.5 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 206 ISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG 265
I +S NGH +T+ + F A G L+S SDD ++IW QS D + H T+
Sbjct: 997 IFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWN-----WQSEDPFFLQAHQETVKD 1051
Query: 266 YHD-RTIFSVHWSREGII 282
+ + + WS +G +
Sbjct: 1052 FRLLKNSRLLSWSFDGTV 1069
Score = 84 (34.6 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 39/143 (27%), Positives = 58/143 (40%)
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA G D ++ I E++ F+ + GH V+ +Q+ L S S D+ +++W
Sbjct: 978 LAFGGEDGAIQILELLNNRIFQSRN---GHKTTVRHIQFTADGKTLISSSDDSAVQIW-- 1032
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
NW H T+ K +L+S S D T+K+W ITR D
Sbjct: 1033 ------NWQSEDPFFLQ--AHQETVKDFRL-LKNSRLLSWSFDGTVKVWNI-ITRRIEKD 1082
Query: 253 GYASWRHL--CTISGYHDRTIFS 273
+ C IS D T FS
Sbjct: 1083 FVCHQDTVLSCDISS--DATKFS 1103
Score = 72 (30.4 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 68 VLEEMHT---RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
+L EMH V+ C +SP L A +W G VA GH + V V
Sbjct: 833 LLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLK--VADCRGHLSWVHCV 890
Query: 125 SWNASGTLLATCGRDKSVWIWE 146
++ G+ T D+++ +WE
Sbjct: 891 MFSPDGSSFLTSSDDQTIRLWE 912
Score = 65 (27.9 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKML--LKKEKAHDMDVNSVQWSPGERRLLA 335
++ +++ + D+ +F S D S+++L L + + H V +S LLA
Sbjct: 1087 QDTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNT-LLA 1145
Query: 336 SASDDGMIKIWELAN 350
+ D+G I+IW ++N
Sbjct: 1146 TGDDNGEIRIWNVSN 1160
Score = 52 (23.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
++ GH V + + P DG + F + S D+T+R+WE + N VL++
Sbjct: 876 KVADCRGHLSWVHCVMFSP----DGSS--FLTSSDDQTIRLWETKKVCK--NSATVLKQ 926
Score = 51 (23.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 267 HDRTIFSVHWSREGIIASGAADDS-VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H T+ + ++ +G ++DDS VQ + +D P + +AH V +
Sbjct: 1004 HKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSED----PFFL------QAHQETVKDFR 1053
Query: 326 WSPGERRLLASASDDGMIKIWEL 348
R L S S DG +K+W +
Sbjct: 1054 LLKNSR--LLSWSFDGTVKVWNI 1074
Score = 50 (22.7 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 36/169 (21%), Positives = 63/169 (37%)
Query: 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRH 259
H ++E + GH S + F+ V +++W D ++ G+ SW H
Sbjct: 829 HSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLKVADCRGHLSWVH 888
Query: 260 LCTIS--------GYHDRTIFSVHWSREGIIASGAA---DDSVQFFVESKDDLIDGPSYK 308
S D+TI W + + + A + F E++ ++ + +
Sbjct: 889 CVMFSPDGSSFLTSSDDQTIRL--WETKKVCKNSATVLKQEIDVVFQENEVTVLAVDNIR 946
Query: 309 ML-LKKEKAHDMD------VNSVQWSPGERRLLASASDDGMIKIWELAN 350
L L +D V+ SP + LA +DG I+I EL N
Sbjct: 947 RLQLINGNTGQIDYLTEAQVSCCCLSP-HLQYLAFGGEDGAIQILELLN 994
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 53/171 (30%), Positives = 94/171 (54%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H+ + S +SP+G+ LA+++ DA IW G+ C TL GH E+ V+W++ +
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGN--CKKTLYGHSLEISDVAWSSDSSR 95
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
L + DK++ +W++ G +C+ L+GH+ V ++P +++ S S+D ++K+W
Sbjct: 96 LVSASDDKTLKVWDMRSG---KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW-- 150
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
+ C++T+S HS I A++FN G +VS S D +IW A
Sbjct: 151 ---EVKTGKCLKTLS----AHSDPISAVNFNCNGSLIVSGSYDGLCRIWDA 194
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 67/239 (28%), Positives = 114/239 (47%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ +TL GH+ + +AW + S S DKT+++W+ R C
Sbjct: 67 GAYDGNCKKTLYGHSLEISDVAWSSDSSR------LVSASDDKTLKVWDM----RSGKCL 116
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H+ V C ++P L+ + SFD + IWE G +C+ TL H + + +V++
Sbjct: 117 KTLKG-HSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTG--KCLKTLSAHSDPISAVNF 173
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD-VKMVQWHPTMDVLFSCSYDN 185
N +G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 174 NCNGSLIVSGSYDGLCRIWDAASG---QCLRTLADEGNPPVSFVKFSPNGKYILTATLDN 230
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL--SFNAKGDK-LVSCSDDLTIKIW 241
T+K+W D C++T + GH + + L SF+ G K +VS S+D + IW
Sbjct: 231 TLKLW-----DYSRGRCLKTYT----GHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW 280
Score = 180 (68.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/135 (32%), Positives = 65/135 (48%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
+Y TL GH + SV ++ +G LA+ D + IW GN C L GH+ ++
Sbjct: 28 NYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGN---CKKTLYGHSLEI 84
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
V W L S S D T+KVW D + C++T+ GHS ++ FN
Sbjct: 85 SDVAWSSDSSRLVSASDDKTLKVW-----DMRSGKCLKTLK----GHSDFVFCCDFNPPS 135
Query: 227 DKLVSCSDDLTIKIW 241
+ +VS S D ++KIW
Sbjct: 136 NLIVSGSFDESVKIW 150
Score = 178 (67.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 56/182 (30%), Positives = 88/182 (48%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D + ++ + +G + S S D RIW+ +AS + C L +
Sbjct: 158 LKTLSAHSDPISAVNFN----CNG--SLIVSGSYDGLCRIWD-AASGQ---CLRTLADEG 207
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV--SWNASGT 131
V +SP+GK + TA+ D T +W+ G C+ T GH+NE + S++ +G
Sbjct: 208 NPPVSFVKFSPNGKYILTATLDNTLKLWDYSRG--RCLKTYTGHKNEKYCLFASFSVTGR 265
Query: 132 LLATCG-RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
G D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 266 KWVVSGSEDNMVYIWNLQTK---EIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIK 322
Query: 189 VW 190
VW
Sbjct: 323 VW 324
Score = 139 (54.0 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 52/213 (24%), Positives = 97/213 (45%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++V+IWE C L H+ + + ++ +G L+ + S+D I
Sbjct: 137 LIVSGSFDESVKIWEVKTGK----CLKTLSA-HSDPISAVNFNCNGSLIVSGSYDGLCRI 191
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL N V V ++ +G + T D ++ +W+ G C+
Sbjct: 192 WDAASG--QCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGR---CLKTY 246
Query: 160 QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN----WHCVQT--ISESNNGH 213
GH + K LF+ S+ T + W ++ DN W+ +QT I + GH
Sbjct: 247 TGHKNE-KYC--------LFA-SFSVTGRKWVVSGSE-DNMVYIWN-LQTKEIVQRLQGH 294
Query: 214 SSTIWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + + + S + +D TIK+W +D
Sbjct: 295 TDVVISAACHPTKNIIASAALENDKTIKVWSSD 327
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 63/199 (31%), Positives = 98/199 (49%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
+ S D V +W + W H V+SC +SP G+L+A++S D + +W D
Sbjct: 43 TASDDGCVYVWGTKSGRLLWRLAG-----HRGPVKSCCFSPDGRLIASSSSDHSIRLW-D 96
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163
V +C+ L+GH+ V++VS++ LA+ G DK +WEV G V +L GH
Sbjct: 97 VARS-KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR---VHLLVGHC 152
Query: 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN-NGHSSTIWALSF 222
++ + PT D L + S+D+T+ +W D +S N GH+ I L +
Sbjct: 153 DSIQSSDFSPTSDSLATGSWDSTVHIW-------DLRASTPVVSYHNLEGHTGNISCLCY 205
Query: 223 NAKGDKLVSCSDDLTIKIW 241
+A G L S S D TI +W
Sbjct: 206 SASG-LLASGSWDKTICVW 223
Score = 186 (70.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V A+SP G+ L TAS D +W G + L GH VKS ++ G L
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSG--RLLWRLAGHRGPVKSCCFSPDGRL 82
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+A+ D S+ +W+V +C+ VL+GH + V+ V + P L S +D VW
Sbjct: 83 IASSSSDHSIRLWDVARS---KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW-- 137
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
E H + GH +I + F+ D L + S D T+ IW
Sbjct: 138 EVQSGRRVHLLV-------GHCDSIQSSDFSPTSDSLATGSWDSTVHIW 179
Score = 176 (67.0 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 68/245 (27%), Positives = 111/245 (45%)
Query: 27 LAWKPTAGVDGVAPVFASC-SGD-KTVRIWEQSASSRFWN-----CKAVLEEMHTRTVRS 79
L W+ AG G PV + C S D + + S R W+ C VL+ H R+V +
Sbjct: 60 LLWR-LAGHRG--PVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKG-HQRSVET 115
Query: 80 CAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD 139
++SP K LA+ +D +WE G V L GH + ++S ++ + LAT D
Sbjct: 116 VSFSPDSKQLASGGWDKRAIVWEVQSG--RRVHLLVGHCDSIQSSDFSPTSDSLATGSWD 173
Query: 140 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN 199
+V IW++ L+GH ++ + + + +L S S+D TI VW + T ++
Sbjct: 174 STVHIWDLRASTPVVSYHNLEGHTGNISCLCYSAS-GLLASGSWDKTICVW--KPTTNN- 229
Query: 200 WHCVQTISESNNGHSSTIW--ALSFNAKGDKLVSCSDDLTIKIWGADITR-MQSGDGYAS 256
+ GH TIW +L+F+ KL S T+K+W + +++ G
Sbjct: 230 ------LPLQLKGH--TIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLD 281
Query: 257 WRHLC 261
H C
Sbjct: 282 VAHAC 286
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 63/220 (28%), Positives = 97/220 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ L+GH V ++++ P + AS DK +WE + R L H
Sbjct: 103 LHVLKGHQRSVETVSFSPDS------KQLASGGWDKRAIVWEVQSGRRVH-----LLVGH 151
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVA--TLEGHENEVKSVSWNASGT 131
+++S +SP+ LAT S+D+T IW D+ V+ LEGH + + ++ASG
Sbjct: 152 CDSIQSSDFSPTSDSLATGSWDSTVHIW-DLRASTPVVSYHNLEGHTGNISCLCYSASG- 209
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
LLA+ DK++ +W+ N L+GH V + + P L S Y T+KVW
Sbjct: 210 LLASGSWDKTICVWKPTTNN---LPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW- 265
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
D C++T+ G A F G LVS
Sbjct: 266 ----DCLTGKCLETLK----GMLDVAHACIFTPDGKLLVS 297
Score = 164 (62.8 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 46/150 (30%), Positives = 77/150 (51%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R + L GH D + S + PT+ D +A + S D TV IW+ AS+ + + E
Sbjct: 143 RRVHLLVGHCDSIQSSDFSPTS--DSLA----TGSWDSTVHIWDLRASTPVVSYHNL--E 194
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT + +S SG LLA+ S+D T C+W+ + L+GH V S++++
Sbjct: 195 GHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPL--QLKGHTIWVNSLAFSPDEL 251
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
LA+ G ++V +W+ + G +C+ L+G
Sbjct: 252 KLASAGYSRTVKVWDCLTG---KCLETLKG 278
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 58/255 (22%), Positives = 107/255 (41%)
Query: 117 HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176
H EV +++ G L T D V++W G + L GH VK + P
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGR---LLWRLAGHRGPVKSCCFSPDGR 81
Query: 177 VLFSCSYDNTIKVWWAEDTD-----SDNWHCVQTISESNNGHS---------STIWALSF 222
++ S S D++I++W + + V+T+S S + + +W +
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 223 NAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS---W--RHLCTISGYHDR-----TIF 272
+ LV D + + + +G ++ W R + YH+ I
Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNIS 201
Query: 273 SVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR 332
+ +S G++ASG+ D ++ + + ++L P + LK H + VNS+ +SP E +
Sbjct: 202 CLCYSASGLLASGSWDKTICVWKPTTNNL---P---LQLK---GHTIWVNSLAFSPDELK 252
Query: 333 LLASASDDGMIKIWE 347
L ASA +K+W+
Sbjct: 253 L-ASAGYSRTVKVWD 266
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 254 (94.5 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 75/247 (30%), Positives = 110/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW S +S
Sbjct: 152 DGDVEIPPNKAVVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLSENSTSG 205
Query: 64 NCKAVLEEM---------HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL + V S W+ G LLAT S+D IW G +TL
Sbjct: 206 STQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN---LASTL 262
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E + H+ V W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTG---EAKQLFPFHSAPALDVDWQSN 319
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+ SCS D I V D ++T GH++ + A+ ++ G+ L SCSD
Sbjct: 320 -NTFASCSTDMCIHVC---KLGQDR--PIKTFQ----GHTNEVNAIKWDPTGNLLASCSD 369
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 370 DMTLKIW 376
Score = 227 (85.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 78/286 (27%), Positives = 123/286 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K + H+
Sbjct: 261 TLGQHKGPIFALKWNKKGNF------ILSAGVDKTTIIWDAHTGE----AKQLFP-FHSA 309
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W S A+ S D CI G + T +GH NEV ++ W+ +G LLA+
Sbjct: 310 PALDVDWQ-SNNTFASCSTDM--CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLAS 366
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + N CV LQ H +++ ++W PT +L S S+D+T
Sbjct: 367 CSDDMTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDST 423
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D D C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 424 VRLW-----DVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFDKCVHIWNT--- 471
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
Q+G S+R G IF V W+ G + + A+D SV
Sbjct: 472 --QTGALVHSYRGT---GG-----IFEVCWNAAGDKVGASASDGSV 507
Score = 200 (75.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 52/148 (35%), Positives = 75/148 (50%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I+T +GHT+ V ++ W PT + ASCS D T++IW NC L+
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNL------LASCSDDMTLKIWSMKQD----NCVHDLQA 389
Query: 72 MHTRTVRSCAWSPSGK---------LLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
H + + + WSP+G +LA+ASFD+T +W DV C+ TL H+ V
Sbjct: 390 -HNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLW-DVDRGI-CIHTLTKHQEPVY 446
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPG 150
SV+++ G LA+ DK V IW G
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 73/297 (24%), Positives = 124/297 (41%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEGHE 118
KAV+ H V CAW+P LLA+ S D+T IW G + V EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQ 220
Query: 119 N-----EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGN---LASTLGQHKGPIFALKWNK 276
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + + + SCS
Sbjct: 277 KGNFILSAGVDKTTIIW-----DAHTGEAKQLFPF----HSAPALDVDWQSN-NTFASCS 326
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQ 292
D+ I + + G R + T G H + ++ W G + + +DD +++
Sbjct: 327 TDMCIHV-------CKLGQD----RPIKTFQG-HTNEVNAIKWDPTGNLLASCSDDMTLK 374
Query: 293 FFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ +D+ + D ++ + K + +P +LASAS D +++W++
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTS--NPNANLMLASASFDSTVRLWDV 429
Score = 144 (55.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 41/137 (29%), Positives = 61/137 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H ++++ W PT G + AS S D TVR+W+ C L
Sbjct: 384 VHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGI----CIHTLT 439
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP G+ LA+ SFD IW G V + G + V WNA+G
Sbjct: 440 K-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG--ALVHSYRG-TGGIFEVCWNAAG 495
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 496 DKVGASASDGSVCVLDL 512
Score = 117 (46.2 bits), Expect = 0.00061, P = 0.00061
Identities = 77/314 (24%), Positives = 130/314 (41%)
Query: 58 ASSRFWNCKAVLEEMHTRTV-RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG 116
+++R WN T+ V R C G ++ D T+ W G +AT G
Sbjct: 191 STARIWNLSENSTSGSTQLVLRHCI--REGGQDVPSNKDVTSLDWNSEG---TLLAT--G 243
Query: 117 HENEVKSVSWNASGTLLATCGRDKS-VWI--WE-----VMPGNEFECVSVLQGHAQDVKM 168
+ + W G L +T G+ K ++ W ++ + + H + K
Sbjct: 244 SYDGFARI-WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQ 302
Query: 169 V-QWH--PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV---QTISESNNGHSSTIWALSF 222
+ +H P +DV + + NT + TD C ++ GH++ + A+ +
Sbjct: 303 LFPFHSAPALDVDWQSN--NTFA---SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 223 NAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-- 280
+ G+ L SCSDD+T+KIW M+ D H + H++ I+++ WS G
Sbjct: 358 DPTGNLLASCSDDMTLKIWS-----MKQ-DNCV---H--DLQA-HNKEIYTIKWSPTGPG 405
Query: 281 --------IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR 332
++AS + D +V+ + D+ G L K H V SV +SP + R
Sbjct: 406 TSNPNANLMLASASFDSTVRLW-----DVDRGICIHTLTK----HQEPVYSVAFSP-DGR 455
Query: 333 LLASASDDGMIKIW 346
LAS S D + IW
Sbjct: 456 YLASGSFDKCVHIW 469
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 254 (94.5 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 78/247 (31%), Positives = 111/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW + +S
Sbjct: 162 DGDVEIPPNKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENSNGG 215
Query: 64 NCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL E H + V S W+ G LLA S+D IW + G +TL
Sbjct: 216 STQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGN---LASTL 272
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 273 GQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQNN 329
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
M SCS D I V D H V+T GH++ + A+ ++ G L SCSD
Sbjct: 330 M-TFASCSTDMCIHVC---RLGCD--HPVKTFQ----GHTNEVNAIKWDPSGMLLASCSD 379
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 380 DMTLKIW 386
Score = 213 (80.0 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 76/286 (26%), Positives = 123/286 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 271 TLGQHKGPIFALKWNKKGNY------VLSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 319
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ S D + +G D+ V T +GH NEV ++ W+ SG LLA+
Sbjct: 320 PALDVDWQ-NNMTFASCSTDMCIHVCR-LGCDHP-VKTFQGHTNEVNAIKWDPSGMLLAS 376
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + CV LQ H++++ ++W PT +L S S+D+T
Sbjct: 377 CSDDMTLKIWSM---KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDST 433
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D + C T+ + H +++++F+ G L S S D + IW
Sbjct: 434 VRLW-----DVEQGVCTHTLMK----HQEPVYSVAFSPDGKYLASGSFDKYVHIWNT--- 481
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG S++ G IF V W+ G + + A+D SV
Sbjct: 482 --QSGSLVHSYQGT---GG-----IFEVCWNARGDKVGASASDGSV 517
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 75/298 (25%), Positives = 124/298 (41%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEG-H 117
KA + H V CAW+P LLA+ S D+T IW GG + V EG H
Sbjct: 171 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGH 230
Query: 118 E----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLA D IW GN S L H + ++W+
Sbjct: 231 DVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGN---LASTLGQHKGPIFALKWNK 286
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSC 232
+ + S D T +W D+ Q HS+ AL + + + SC
Sbjct: 287 KGNYVLSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAP--ALDVDWQNNMTFASC 335
Query: 233 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SV 291
S D+ I + R+ G + + T G H + ++ W G++ + +DD ++
Sbjct: 336 STDMCIHV-----CRL--GCDHP----VKTFQG-HTNEVNAIKWDPSGMLLASCSDDMTL 383
Query: 292 QFFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ + +D + D ++ + K +P +LASAS D +++W++
Sbjct: 384 KIWSMKQDACVHDLQAHSKEIYTIKWSP--TGPATSNPNSSIMLASASFDSTVRLWDV 439
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDG---VAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H+ ++++ W PT + + AS S D TVR+W+ C L
Sbjct: 394 VHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGV----CTHTLM 449
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP GK LA+ SFD IW G V + +G + V WNA G
Sbjct: 450 K-HQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSL--VHSYQG-TGGIFEVCWNARG 505
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 506 DKVGASASDGSVCVLDL 522
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 251 (93.4 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 65/175 (37%), Positives = 102/175 (58%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
T+EGH+D V S+A+ P DG + AS S +KT+++W+ SA+ K L H+
Sbjct: 150 TIEGHSDWVLSVAFSP----DG--QLLASGSAEKTIKLWD-SATC---GLKHTLGG-HSN 198
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
V +SP G+LLA+ S DAT +W+ G + TLEGH N+++S++++ +G LLA+
Sbjct: 199 WVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLK--HTLEGHSNKIESLAFSPNGQLLAS 256
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
D ++ +W+ G+ F L+GH+ V V + P +L S S DNTIK+W
Sbjct: 257 GSSDATIKLWDTATGS-FR--HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 189 (71.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 80/303 (26%), Positives = 141/303 (46%)
Query: 63 WNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
W + E H+ + + +SP G+LLA+ S D T +W+ G + TLEGH + V+
Sbjct: 30 WGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK--QTLEGHSSSVQ 87
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC- 181
SV+++ +G LLA+ D ++ +W + ++GH+ V+ V + P +
Sbjct: 88 SVAFSPNGQLLASGSSDTTIKLWNSASDS---LKHTMEGHSDRVESVAFSPNGQLWNPAI 144
Query: 182 -SYDNTIKV---WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237
S +TI+ W S + Q ++ + + +W + L S+ +
Sbjct: 145 GSLKHTIEGHSDWVLSVAFSPDG---QLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVL 201
Query: 238 IKIWGADITRMQSGDGYAS---W-------RHLCTISGYHDRTIFSVHWSREG-IIASGA 286
++ D + SG A+ W +H T+ G H I S+ +S G ++ASG+
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPPSGSLKH--TLEG-HSNKIESLAFSPNGQLLASGS 258
Query: 287 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+D +++ + D G S++ LK DM V SV +SP + +LL S S D IK+W
Sbjct: 259 SDATIKLW-----DTATG-SFRHTLKGHS--DM-VLSVVFSP-DSQLLESGSGDNTIKLW 308
Query: 347 ELA 349
+ A
Sbjct: 309 DPA 311
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 46/135 (34%), Positives = 73/135 (54%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL GH++ V L + P DG + AS S D T+++W+ + S K LE H+
Sbjct: 192 TLGGHSNWVLPLVFSP----DG--RLLASGSNDATIKLWDPPSGS----LKHTLEG-HSN 240
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
+ S A+SP+G+LLA+ S DAT +W+ G + TL+GH + V SV ++ LL +
Sbjct: 241 KIESLAFSPNGQLLASGSSDATIKLWDTATGSFR--HTLKGHSDMVLSVVFSPDSQLLES 298
Query: 136 CGRDKSVWIWEVMPG 150
D ++ +W+ G
Sbjct: 299 GSGDNTIKLWDPATG 313
Score = 142 (55.0 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 72/241 (29%), Positives = 111/241 (46%)
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
TL +T R K W G E + L+GH+ ++ V + P +L S S D TIK+W
Sbjct: 16 TLQSTLQRPKVEDNW----GPELQ---TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLW 68
Query: 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250
D + QT+ GHSS++ +++F+ G L S S D TIK+W + +
Sbjct: 69 -----DPASGGLKQTLE----GHSSSVQSVAFSPNGQLLASGSSDTTIKLWNS------A 113
Query: 251 GDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDD---------- 300
D S +H T+ G+ DR + SV +S G + + A S++ +E D
Sbjct: 114 SD---SLKH--TMEGHSDR-VESVAFSPNGQLWNPAIG-SLKHTIEGHSDWVLSVAFSPD 166
Query: 301 ---LIDGPSYKMLLKKEKA-----HDMDVNSVQW------SPGERRLLASASDDGMIKIW 346
L G + K + + A H + +S W SP + RLLAS S+D IK+W
Sbjct: 167 GQLLASGSAEKTIKLWDSATCGLKHTLGGHS-NWVLPLVFSP-DGRLLASGSNDATIKLW 224
Query: 347 E 347
+
Sbjct: 225 D 225
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 252 (93.8 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 75/247 (30%), Positives = 112/247 (45%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG ++ + L GH V+ AW P V+ + AS SGD T RIW + +S
Sbjct: 207 DGEVDIPSSKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENSNGG 260
Query: 64 NCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL E H + V S W+ +G LLAT S+D IW + G +TL
Sbjct: 261 STQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGN---LASTL 317
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 318 GQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQNN 374
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
M SCS D I V C + + ++ GH++ + A+ ++ G L SCSD
Sbjct: 375 M-TFASCSTDMCIHVC--------RLGCDRPV-KTFQGHTNEVNAIKWDPSGMLLASCSD 424
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 425 DMTLKIW 431
Score = 211 (79.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 76/286 (26%), Positives = 123/286 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 316 TLGQHKGPIFALKWNRKGNY------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 364
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ S D + +G D V T +GH NEV ++ W+ SG LLA+
Sbjct: 365 PALDVDWQ-NNMTFASCSTDMCIHVCR-LGCDRP-VKTFQGHTNEVNAIKWDPSGMLLAS 421
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + C+ LQ H +++ ++W PT +L S S+D+T
Sbjct: 422 CSDDMTLKIWSM---KQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDST 478
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D + C T+++ H +++++F+ G L S S D + IW
Sbjct: 479 VRLW-----DIERGVCTHTLTK----HQEPVYSVAFSPDGRYLASGSFDKCVHIWNT--- 526
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG+ S+R G IF V W+ G + + A+D SV
Sbjct: 527 --QSGNLVHSYRGT---GG-----IFEVCWNARGDKVGASASDGSV 562
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 77/300 (25%), Positives = 120/300 (40%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEG-H 117
KA + H V CAW+P LLA+ S D+T IW GG + V EG H
Sbjct: 216 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGH 275
Query: 118 E----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN +GTLLAT D IW GN S L H + ++W+
Sbjct: 276 DVPSNKDVTSLDWNTNGTLLATGSYDGFARIW-TEDGN---LASTLGQHKGPIFALKWNR 331
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSC 232
+ + S D T +W D+ Q HS+ AL + + + SC
Sbjct: 332 KGNYILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAP--ALDVDWQNNMTFASC 380
Query: 233 SDDLTIKIW--GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDS 290
S D+ I + G D R + T G H + ++ W G++ + +DD
Sbjct: 381 STDMCIHVCRLGCD-------------RPVKTFQG-HTNEVNAIKWDPSGMLLASCSDDM 426
Query: 291 VQFFVESKDDLI--DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
K ++ D ++ + K +P +LASAS D +++W++
Sbjct: 427 TLKIWSMKQEVCIHDLQAHNKEIYTIKWSP--TGPATSNPNSNIMLASASFDSTVRLWDI 484
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 43/138 (31%), Positives = 62/138 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAP----VFASCSGDKTVRIWEQSASSRFWNCKAVL 69
I L+ H ++++ W PT G P + AS S D TVR+W+ C L
Sbjct: 439 IHDLQAHNKEIYTIKWSPT-GPATSNPNSNIMLASASFDSTVRLWDIERGV----CTHTL 493
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H V S A+SP G+ LA+ SFD IW G+ V + G + V WNA
Sbjct: 494 TK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNL--VHSYRG-TGGIFEVCWNAR 549
Query: 130 GTLLATCGRDKSVWIWEV 147
G + D SV + ++
Sbjct: 550 GDKVGASASDGSVCVLDL 567
Score = 135 (52.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 51/182 (28%), Positives = 88/182 (48%)
Query: 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
AT+ G EN SV+ +A + D V I P ++ +VL+GH +V + W
Sbjct: 185 ATVNGEENRAHSVNNHAKPMEI-----DGEVDI----PSSK---ATVLRGHESEVFICAW 232
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
+P D+L S S D+T ++W ++E++NG S+ + +G V
Sbjct: 233 NPVSDLLASGSGDSTARIW--------------NLNENSNGGSTQLVLRHCIREGGHDVP 278
Query: 232 CSDDLTIKIWGADITRMQSG--DGYAS-WR---HLCTISGYHDRTIFSVHWSREG--IIA 283
+ D+T W + T + +G DG+A W +L + G H IF++ W+R+G I++
Sbjct: 279 SNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILS 338
Query: 284 SG 285
+G
Sbjct: 339 AG 340
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 252 (93.8 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 79/271 (29%), Positives = 131/271 (48%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+RS +SP GK LAT + D +W+ + + GHE ++ S+ + +G +A+
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHI--FSGHEQDIYSLDFAGNGRYIASG 376
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
DK+V +W++ G +S+ G V V P + + S D T++VW D
Sbjct: 377 SGDKTVRLWDIAEGKLVYTLSIEDG----VTTVAMSPDGLYVAAGSLDKTVRVW-----D 427
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS 256
+ + V+ + E+ +GH ++++++F G +LVS S D TIK+W ++ R Q
Sbjct: 428 TTTGYLVERL-ENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKG 486
Query: 257 WRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK 315
+ T G+ D + SV + +G + SG+ D VQF+ D I G + ML +
Sbjct: 487 GKCHRTFEGHKD-FVLSVCLTPDGHWVMSGSKDRGVQFW-----DPITGNAQMML----Q 536
Query: 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H V SV SP L A+ S D +IW
Sbjct: 537 GHKNSVISVAPSP-TGNLFATGSGDMRARIW 566
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 61/212 (28%), Positives = 94/212 (44%)
Query: 1 MEFLDDGNYELREIQTLEGH-TDRVWSLAWKP---TAGV-DGVAPVFASCSG-------- 47
++F +G Y I + G T R+W +A T + DGV V S G
Sbjct: 364 LDFAGNGRY----IASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSL 419
Query: 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----- 102
DKTVR+W+ + + + H +V S A++P+GK L + S D T +WE
Sbjct: 420 DKTVRVWDTTTGYLVERLEN--PDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPR 477
Query: 103 ----DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSV 158
G +C T EGH++ V SV G + + +D+ V W+ + GN +
Sbjct: 478 QQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGN---AQMM 534
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
LQGH V V PT ++ + S D ++W
Sbjct: 535 LQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 152 (58.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 52/205 (25%), Positives = 92/205 (44%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
A+ + DK +R+W+ ++R K + H + + S ++ +G+ +A+ S D T +W+
Sbjct: 332 ATGAEDKQIRVWD--IATR--TIKHIFSG-HEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH 162
G + V TL E+ V +V+ + G +A DK+V +W+ G E + GH
Sbjct: 387 IAEG--KLVYTLS-IEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGH 443
Query: 163 AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE------DTDSDNWHCVQTISESNNGHSST 216
V V + P L S S D TIK+W ++ C +T GH
Sbjct: 444 KDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFE----GHKDF 499
Query: 217 IWALSFNAKGDKLVSCSDDLTIKIW 241
+ ++ G ++S S D ++ W
Sbjct: 500 VLSVCLTPDGHWVMSGSKDRGVQFW 524
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 251 (93.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 75/247 (30%), Positives = 109/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW S +S
Sbjct: 152 DGDVEIPPNKAVVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLSENSTSG 205
Query: 64 NCKAVLEEM---------HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL + V S W+ G LLAT S+D IW G +TL
Sbjct: 206 STQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN---LASTL 262
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQSN 319
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+ SCS D I V D ++T GH++ + A+ ++ G+ L SCSD
Sbjct: 320 -NTFASCSTDMCIHVC---KLGQDR--PIKTFQ----GHTNEVNAIKWDPTGNLLASCSD 369
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 370 DMTLKIW 376
Score = 224 (83.9 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 78/286 (27%), Positives = 122/286 (42%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 261 TLGQHKGPIFALKWNKKGNF------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 309
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W S A+ S D CI G + T +GH NEV ++ W+ +G LLA+
Sbjct: 310 PALDVDWQ-SNNTFASCSTDM--CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLAS 366
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + N CV LQ H +++ ++W PT +L S S+D+T
Sbjct: 367 CSDDMTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDST 423
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D D C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 424 VRLW-----DVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFDKCVHIWNT--- 471
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
Q+G S+R G IF V W+ G + + A+D SV
Sbjct: 472 --QTGALVHSYRGT---GG-----IFEVCWNAAGDKVGASASDGSV 507
Score = 200 (75.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 52/148 (35%), Positives = 75/148 (50%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I+T +GHT+ V ++ W PT + ASCS D T++IW NC L+
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNL------LASCSDDMTLKIWSMKQD----NCVHDLQA 389
Query: 72 MHTRTVRSCAWSPSGK---------LLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
H + + + WSP+G +LA+ASFD+T +W DV C+ TL H+ V
Sbjct: 390 -HNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW-DVDRGI-CIHTLTKHQEPVY 446
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPG 150
SV+++ G LA+ DK V IW G
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 173 (66.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 73/297 (24%), Positives = 124/297 (41%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEGHE 118
KAV+ H V CAW+P LLA+ S D+T IW G + V EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQ 220
Query: 119 N-----EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGN---LASTLGQHKGPIFALKWNK 276
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + + + SCS
Sbjct: 277 KGNFILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQSN-NTFASCS 326
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQ 292
D+ I + + G R + T G H + ++ W G + + +DD +++
Sbjct: 327 TDMCIHV-------CKLGQD----RPIKTFQG-HTNEVNAIKWDPTGNLLASCSDDMTLK 374
Query: 293 FFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ +D+ + D ++ + K + +P +LASAS D +++W++
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN--NPNANLMLASASFDSTVRLWDV 429
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H ++++ W PT G + + AS S D TVR+W+ C L
Sbjct: 384 VHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGI----CIHTLT 439
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP G+ LA+ SFD IW G V + G + V WNA+G
Sbjct: 440 K-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG--ALVHSYRG-TGGIFEVCWNAAG 495
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 496 DKVGASASDGSVCVLDL 512
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 251 (93.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 75/247 (30%), Positives = 109/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW S +S
Sbjct: 152 DGDVEIPPNKAVVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLSENSTSG 205
Query: 64 NCKAVLEEM---------HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL + V S W+ G LLAT S+D IW G +TL
Sbjct: 206 STQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN---LASTL 262
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQSN 319
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+ SCS D I V D ++T GH++ + A+ ++ G+ L SCSD
Sbjct: 320 -NTFASCSTDMCIHVC---KLGQDR--PIKTFQ----GHTNEVNAIKWDPTGNLLASCSD 369
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 370 DMTLKIW 376
Score = 224 (83.9 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 78/286 (27%), Positives = 122/286 (42%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 261 TLGQHKGPIFALKWNKKGNF------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 309
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W S A+ S D CI G + T +GH NEV ++ W+ +G LLA+
Sbjct: 310 PALDVDWQ-SNNTFASCSTDM--CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLAS 366
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + N CV LQ H +++ ++W PT +L S S+D+T
Sbjct: 367 CSDDMTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDST 423
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D D C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 424 VRLW-----DVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFDKCVHIWNT--- 471
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
Q+G S+R G IF V W+ G + + A+D SV
Sbjct: 472 --QTGALVHSYRGT---GG-----IFEVCWNAAGDKVGASASDGSV 507
Score = 200 (75.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 52/148 (35%), Positives = 75/148 (50%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I+T +GHT+ V ++ W PT + ASCS D T++IW NC L+
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNL------LASCSDDMTLKIWSMKQD----NCVHDLQA 389
Query: 72 MHTRTVRSCAWSPSGK---------LLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
H + + + WSP+G +LA+ASFD+T +W DV C+ TL H+ V
Sbjct: 390 -HNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW-DVDRGI-CIHTLTKHQEPVY 446
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPG 150
SV+++ G LA+ DK V IW G
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 173 (66.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 73/297 (24%), Positives = 124/297 (41%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEGHE 118
KAV+ H V CAW+P LLA+ S D+T IW G + V EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQ 220
Query: 119 N-----EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGN---LASTLGQHKGPIFALKWNK 276
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + + + SCS
Sbjct: 277 KGNFILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQSN-NTFASCS 326
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQ 292
D+ I + + G R + T G H + ++ W G + + +DD +++
Sbjct: 327 TDMCIHV-------CKLGQD----RPIKTFQG-HTNEVNAIKWDPTGNLLASCSDDMTLK 374
Query: 293 FFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ +D+ + D ++ + K + +P +LASAS D +++W++
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN--NPNANLMLASASFDSTVRLWDV 429
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H ++++ W PT G + + AS S D TVR+W+ C L
Sbjct: 384 VHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGI----CIHTLT 439
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP G+ LA+ SFD IW G V + G + V WNA+G
Sbjct: 440 K-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG--ALVHSYRG-TGGIFEVCWNAAG 495
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 496 DKVGASASDGSVCVLDL 512
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 251 (93.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 75/247 (30%), Positives = 109/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW S +S
Sbjct: 152 DGDVEIPPNKAVVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLSENSTSG 205
Query: 64 NCKAVLEEM---------HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL + V S W+ G LLAT S+D IW G +TL
Sbjct: 206 STQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN---LASTL 262
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQSN 319
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+ SCS D I V D ++T GH++ + A+ ++ G+ L SCSD
Sbjct: 320 -NTFASCSTDMCIHVC---KLGQDR--PIKTFQ----GHTNEVNAIKWDPTGNLLASCSD 369
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 370 DMTLKIW 376
Score = 214 (80.4 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 77/289 (26%), Positives = 122/289 (42%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 261 TLGQHKGPIFALKWNKKGNF------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 309
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W S A+ S D CI G + T +GH NEV ++ W+ +G LLA+
Sbjct: 310 PALDVDWQ-SNNTFASCSTDM--CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLAS 366
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT------------MDVLFSCSY 183
C D ++ IW + + CV LQ H +++ ++W PT + L S S+
Sbjct: 367 CSDDMTLKIWSM---KQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASF 423
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
D+T+++W D D C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 424 DSTVRLW-----DVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 474
Query: 244 DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
Q+G S+R G IF V W+ G + + A+D SV
Sbjct: 475 -----QTGALVHSYRGT---GG-----IFEVCWNAAGDKVGASASDGSV 510
Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 52/151 (34%), Positives = 75/151 (49%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I+T +GHT+ V ++ W PT + ASCS D T++IW S C L+
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNL------LASCSDDMTLKIWSMKQDS----CVHDLQA 389
Query: 72 MHTRTVRSCAWSPSGK---------LLAT---ASFDATTCIWEDVGGDYECVATLEGHEN 119
H + + + WSP+G +LA+ ASFD+T +W DV C+ TL H+
Sbjct: 390 -HNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLW-DVDRGI-CIHTLTKHQE 446
Query: 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150
V SV+++ G LA+ DK V IW G
Sbjct: 447 PVYSVAFSPDGRYLASGSFDKCVHIWNTQTG 477
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 73/300 (24%), Positives = 123/300 (41%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEGHE 118
KAV+ H V CAW+P LLA+ S D+T IW G + V EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQ 220
Query: 119 N-----EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGN---LASTLGQHKGPIFALKWNK 276
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + + + SCS
Sbjct: 277 KGNFILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQSN-NTFASCS 326
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQ 292
D+ I + + G R + T G H + ++ W G + + +DD +++
Sbjct: 327 TDMCIHV-------CKLGQD----RPIKTFQG-HTNEVNAIKWDPTGNLLASCSDDMTLK 374
Query: 293 FFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS---ASDDGMIKIWEL 348
+ +D + D ++ + K + +P +LAS AS D +++W++
Sbjct: 375 IWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTN--NPNANLMLASLDSASFDSTVRLWDV 432
Score = 137 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 83/331 (25%), Positives = 135/331 (40%)
Query: 38 VAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS-PSGKLLATASFDA 96
V+ + AS SGD T RIW S +S + + VL H +R PS K D
Sbjct: 180 VSDLLASGSGDSTARIWNLSENSTSGSTQLVLR--HC--IREGGQDVPSNK-------DV 228
Query: 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS-VWI--WE-----VM 148
T+ W G +AT G + + W G L +T G+ K ++ W ++
Sbjct: 229 TSLDWNSEG---TLLAT--GSYDGFARI-WTKDGNLASTLGQHKGPIFALKWNKKGNFIL 282
Query: 149 PGNEFECVSVLQGHAQDVKM-VQWH--PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV-- 203
+ + H + K +H P +DV + + NT + TD C
Sbjct: 283 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSN--NTFA---SCSTDMCIHVCKLG 337
Query: 204 -QTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCT 262
++ GH++ + A+ ++ G+ L SCSDD+T+KIW M+ S H
Sbjct: 338 QDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS-----MKQD----SCVH--D 386
Query: 263 ISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKM-------LLKKEK 315
+ H++ I+++ WS G G + + + S D + ++ +
Sbjct: 387 LQA-HNKEIYTIKWSPTG---PGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLT 442
Query: 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H V SV +SP + R LAS S D + IW
Sbjct: 443 KHQEPVYSVAFSP-DGRYLASGSFDKCVHIW 472
Score = 134 (52.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/140 (28%), Positives = 61/140 (43%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDG-----VAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
+ L+ H ++++ W PT G + + S S D TVR+W+ C
Sbjct: 384 VHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGI----CIH 439
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
L + H V S A+SP G+ LA+ SFD IW G V + G + V WN
Sbjct: 440 TLTK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG--ALVHSYRG-TGGIFEVCWN 495
Query: 128 ASGTLLATCGRDKSVWIWEV 147
A+G + D SV + ++
Sbjct: 496 AAGDKVGASASDGSVCVLDL 515
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 251 (93.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 75/247 (30%), Positives = 111/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW + +S
Sbjct: 161 DGDVEIPPNKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENSNSG 214
Query: 64 NCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL E H + V S W+ G LLAT S+D IW + G +TL
Sbjct: 215 STQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGN---LASTL 271
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 272 GQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQNN 328
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
SCS D I V C + + ++ GH++ + A+ ++ G L SCSD
Sbjct: 329 T-TFASCSTDMCIHVC--------RLGCDRPV-KTFQGHTNEVNAIKWDPSGMLLASCSD 378
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 379 DMTLKIW 385
Score = 223 (83.6 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 78/286 (27%), Positives = 124/286 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 270 TLGQHKGPIFALKWNKKGNY------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 318
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ S D + +G D V T +GH NEV ++ W+ SG LLA+
Sbjct: 319 PALDVDWQ-NNTTFASCSTDMCIHVCR-LGCDRP-VKTFQGHTNEVNAIKWDPSGMLLAS 375
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + CV LQ H++++ ++W PT +L S S+D+T
Sbjct: 376 CSDDMTLKIWSM---KQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDST 432
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D D C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 433 VRLW-----DVDRGVCIHTLTK----HQEPVYSVAFSPDGKYLASGSFDKCVHIWNT--- 480
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG S+R G IF V W+ G + + A+D SV
Sbjct: 481 --QSGTLVHSYRGT---GG-----IFEVCWNARGDKVGASASDGSV 516
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 74/299 (24%), Positives = 121/299 (40%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEG-H 117
KA + H V CAW+P LLA+ S D+T IW G + V EG H
Sbjct: 170 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGH 229
Query: 118 E----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 230 DVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGN---LASTLGQHKGPIFALKWNK 285
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + SCS
Sbjct: 286 KGNYILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQ-NNTTFASCS 335
Query: 234 DDLTIKIW--GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-S 290
D+ I + G D R + T G H + ++ W G++ + +DD +
Sbjct: 336 TDMCIHVCRLGCD-------------RPVKTFQG-HTNEVNAIKWDPSGMLLASCSDDMT 381
Query: 291 VQFFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
++ + +D + D ++ + K + +P +LASAS D +++W++
Sbjct: 382 LKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTS--NPNSNIMLASASFDSTVRLWDV 438
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 42/137 (30%), Positives = 61/137 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H+ ++++ W PT G + AS S D TVR+W+ C L
Sbjct: 393 VHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGV----CIHTLT 448
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP GK LA+ SFD IW G V + G + V WNA G
Sbjct: 449 K-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTL--VHSYRG-TGGIFEVCWNARG 504
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 505 DKVGASASDGSVCVLDL 521
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149
ATA T ++ + E AT+ G EN +++ N S + D V I P
Sbjct: 119 ATAGTTTTAVSQQNTPKNGE--ATVNGEENGAHAIN-NHSKPMEI----DGDVEI----P 167
Query: 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209
N+ +VL+GH +V + W+P D+L S S D+T ++W ++E+
Sbjct: 168 PNK---ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIW--------------NLNEN 210
Query: 210 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG--DGYAS-WR---HLCTI 263
+N S+ + +G V + D+T W +D T + +G DG+A W +L +
Sbjct: 211 SNSGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAST 270
Query: 264 SGYHDRTIFSVHWSREG--IIASG 285
G H IF++ W+++G I+++G
Sbjct: 271 LGQHKGPIFALKWNKKGNYILSAG 294
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 244 (91.0 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/202 (30%), Positives = 94/202 (46%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEM-HTRTVRSCAWSPSGKLLATASFDATTC 99
+ SC D R+W+ + C +L HT + C + PSG LAT+S D T
Sbjct: 366 ILVSCGED---RLWKVLGLPK---CNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVK 419
Query: 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
+W+ GD C+ T EGH V S +W++ G +A+ DK+ IW+V N C L
Sbjct: 420 LWDLCKGD--CILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDV---NSERCRCTL 474
Query: 160 QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 219
GH V +++ P + L + S D T+ +W D+ C Q++ GH +I
Sbjct: 475 YGHTDSVNSIEFFPFSNTLLTSSADKTLSIW-----DARTGICEQSLY----GHMHSIND 525
Query: 220 LSFNAKGDKLVSCSDDLTIKIW 241
F+ +G + SC K+W
Sbjct: 526 AIFDPRGHMIASCDACGVTKLW 547
Score = 163 (62.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 55 EQSASSRF-WNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT 113
E + ++F + K + +H V + P +L + D +W+ +G +C
Sbjct: 333 ESLSPAKFDYKLKNIFR-LHELPVSCVSMQPHKDILVSCGEDR---LWKVLGLP-KCNVL 387
Query: 114 LEG--HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
L G H + + ++ SG LAT D +V +W++ G +C+ +GH++ V W
Sbjct: 388 LTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKG---DCILTFEGHSRAVWSCTW 444
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
H + + S S D T K+W D +S+ C T+ GH+ ++ ++ F + L++
Sbjct: 445 HSCGNFVASSSLDKTSKIW---DVNSERCRC--TLY----GHTDSVNSIEFFPFSNTLLT 495
Query: 232 CSDDLTIKIWGA 243
S D T+ IW A
Sbjct: 496 SSADKTLSIWDA 507
Score = 147 (56.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 42/133 (31%), Positives = 61/133 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I T EGH+ VWS W AS S DKT +IW+ + S R C+ L H
Sbjct: 429 ILTFEGHSRAVWSCTWHSCGNF------VASSSLDKTSKIWDVN-SER---CRCTLYG-H 477
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
T +V S + P L T+S D T IW+ G C +L GH + + ++ G ++
Sbjct: 478 TDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGI--CEQSLYGHMHSINDAIFDPRGHMI 535
Query: 134 ATCGRDKSVWIWE 146
A+C +W+
Sbjct: 536 ASCDACGVTKLWD 548
Score = 143 (55.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
DY+ HE V VS +L +CG D+ +W+V+ + + GH +
Sbjct: 341 DYKLKNIFRLHELPVSCVSMQPHKDILVSCGEDR---LWKVLGLPKCNVLLTGFGHTDWL 397
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
+HP+ D L + S D T+K+W D C+ T GHS +W+ ++++ G
Sbjct: 398 SDCCFHPSGDKLATSSGDTTVKLW-----DLCKGDCILTFE----GHSRAVWSCTWHSCG 448
Query: 227 DKLVSCSDDLTIKIWGADITR 247
+ + S S D T KIW + R
Sbjct: 449 NFVASSSLDKTSKIWDVNSER 469
Score = 47 (21.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 300 DLIDGPSYKMLLKKEKAHDMDVNSVQWS-PGERRLLASASDDGMIKIW 346
DL G +K++ H+ + ++V +S GE +L S DG ++ W
Sbjct: 590 DLKSGEIHKLM-----GHENEAHTVVFSHDGE--ILFSGGSDGTVRTW 630
Score = 45 (20.9 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 19/98 (19%), Positives = 43/98 (43%)
Query: 256 SWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKE 314
S R CT+ G+ D ++ S+ + + + +AD ++ + +++ + + Y
Sbjct: 467 SERCRCTLYGHTD-SVNSIEFFPFSNTLLTSSADKTLSIW-DARTGICEQSLY------- 517
Query: 315 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANTL 352
H +N + P ++AS G+ K+W+ L
Sbjct: 518 -GHMHSINDAIFDP-RGHMIASCDACGVTKLWDFRKLL 553
Score = 38 (18.4 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 332 RLLASASDDGMIKIWEL 348
R+LA AS +G+I + +L
Sbjct: 575 RVLAQASGNGVIHLLDL 591
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 212 (79.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 62/185 (33%), Positives = 91/185 (49%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTA-----GVDGVAPVFASCSGDKTVRIWEQSASSRFWNC 65
L E +++GHTDRV L+W P A V A F S G+ V +W
Sbjct: 229 LEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPL--- 285
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
A LE R R+ + PSGK +A+AS+D T +W DV E + EGH EV +V+
Sbjct: 286 -ATLEGHSGRVCRT-EFHPSGKYIASASYDTTWRLW-DVETTAE-LQLQEGHSREVYTVA 341
Query: 126 WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 185
+N G+LLA+ G D +W++ G V +L+GH +++ + W + S S D
Sbjct: 342 FNNDGSLLASGGLDSIGRVWDLRTGRT---VMILEGHIREIFGLDWGVDGYRVLSGSGDG 398
Query: 186 TIKVW 190
+K W
Sbjct: 399 WVKCW 403
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 61/266 (22%), Positives = 111/266 (41%)
Query: 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154
+ C+W + D + +ATLEGH V ++ SG +A+ D + +W+V E +
Sbjct: 271 EGNVCLWS-LDKD-QPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQ 328
Query: 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
+ +GH+++V V ++ +L S D+ +VW D V + GH
Sbjct: 329 ---LQEGHSREVYTVAFNNDGSLLASGGLDSIGRVW-----DLRTGRTVMILE----GHI 376
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCT----ISGYHDRT 270
I+ L + G +++S S D +K W D+ ++++ G + + + + G +
Sbjct: 377 REIFGLDWGVDGYRVLSGSGDGWVKCW--DLRQVKNTGGIGAHKSVVSDVRWYKGSESAS 434
Query: 271 IFSVHWSREGIIASGAADDSVQ------FFVESKDD----LIDGPSYKMLLKKEKAHDMD 320
+ G + A VQ FFV S D + + L+K H +
Sbjct: 435 FLPTTEGQPGRMDVDGATAPVQPRKSGTFFVSSGFDKNVNIFSADDWS-LIKTLSGHSGN 493
Query: 321 VNSVQWSPGERRLLASASDDGMIKIW 346
V S S + +AS D +K+W
Sbjct: 494 VLSADIS-NNAQWIASCGHDRTVKLW 518
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/179 (25%), Positives = 85/179 (47%)
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVG-GDYECVATLEGHENEVKSVSWNASGTL- 132
R V C ++P G+ +AT ++ + +G + E +++GH + V +SW TL
Sbjct: 198 RPVSICRFAPDGQTIATGNWGGGIRL---LGVPNLEEKLSVKGHTDRVGGLSWFPGATLP 254
Query: 133 ----------LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182
+ G + +V +W + ++ + ++ L+GH+ V ++HP+ + S S
Sbjct: 255 ESNVSESAVNFVSGGGEGNVCLWSL---DKDQPLATLEGHSGRVCRTEFHPSGKYIASAS 311
Query: 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
YD T ++W E T +Q + E GHS ++ ++FN G L S D ++W
Sbjct: 312 YDTTWRLWDVETTAE-----LQ-LQE---GHSREVYTVAFNNDGSLLASGGLDSIGRVW 361
Score = 86 (35.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S +D + ++ A+D W ++T+S GHS + + + + SC D T+K
Sbjct: 466 SSGFDKNVNIFSADD-----WSLIKTLS----GHSGNVLSADISNNAQWIASCGHDRTVK 516
Query: 240 IWGAD 244
+WG +
Sbjct: 517 LWGIE 521
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 236 (88.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 61/198 (30%), Positives = 95/198 (47%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
SCS D R+W+ + N + HT + C + PSG LAT+S D+T +W+
Sbjct: 377 SCSED---RLWKMVGLPQ-GNV-LLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDL 431
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163
G EC TLEGH + V S +W++ G +A+ D + IW+V N C L GH
Sbjct: 432 NKG--ECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDV---NSERCRYTLYGHT 486
Query: 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223
V +++ P ++L + S D T+ VW D+ C Q++ GH ++ +F
Sbjct: 487 DSVNSIEFFPFSNILLTASADKTLSVW-----DARTGKCEQSLY----GHMHSVNDATFT 537
Query: 224 AKGDKLVSCSDDLTIKIW 241
+G + SC K+W
Sbjct: 538 PRGHIIASCDARGVTKLW 555
Score = 167 (63.8 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 48/173 (27%), Positives = 80/173 (46%)
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG-GDYECVATLEGHENEVKSVSWNASG 130
+H V P L + S D +W+ VG + T GH + + ++ SG
Sbjct: 358 LHELPVSCIVMHPCRDYLISCSEDR---LWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSG 414
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ LAT D ++ +W++ N+ EC L+GH V WH D + S S D T K+W
Sbjct: 415 SKLATSSGDSTIKLWDL---NKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIW 471
Query: 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
D +S+ C T+ GH+ ++ ++ F + L++ S D T+ +W A
Sbjct: 472 ---DVNSER--CRYTLY----GHTDSVNSIEFFPFSNILLTASADKTLSVWDA 515
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 95 DATTCIWEDVGG---DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151
+ T+C E+V DY+ HE V + + L +C D+ +W+++
Sbjct: 335 NVTSCT-ENVSAAKFDYKLNNIFRLHELPVSCIVMHPCRDYLISCSEDR---LWKMVGLP 390
Query: 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNN 211
+ + GH + +HP+ L + S D+TIK+W D + C T+
Sbjct: 391 QGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLW-----DLNKGECTLTLE---- 441
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
GH+ +W+ ++++ GD + S S D+T KIW + R
Sbjct: 442 GHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSER 477
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 60/240 (25%), Positives = 102/240 (42%)
Query: 13 EIQTLEGH-TDRVWSL-AWKPTAGVDGVAPVFASCS----GDKTVRIWEQSASSRFWN-- 64
++ T G T ++W L + T ++G SC+ GD V +S+ W+
Sbjct: 416 KLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD-FVASASLDMTSKIWDVN 474
Query: 65 ---CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEV 121
C+ L HT +V S + P +L TAS D T +W+ G +C +L GH + V
Sbjct: 475 SERCRYTLYG-HTDSVNSIEFFPFSNILLTASADKTLSVWDARTG--KCEQSLYGHMHSV 531
Query: 122 KSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181
++ G ++A+C +W+ VS+ G + + V + + VL
Sbjct: 532 NDATFTPRGHIIASCDARGVTKLWDFR--KLIPIVSIDVGPSSGNE-VNFDQSGRVLAQA 588
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S + I + D S H + GH S + ++ F+ G+ L S D TI++W
Sbjct: 589 SANGIIHLL---DLKSGQIHKLV-------GHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 57 (25.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 274 VHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP-GER 331
V++ + G ++A +A+ + DL G +K++ H+ +V+SV +S GE
Sbjct: 576 VNFDQSGRVLAQASANGIIHLL-----DLKSGQIHKLV-----GHESEVHSVVFSHLGEN 625
Query: 332 RLLASASDDGMIKIW 346
L S DG I++W
Sbjct: 626 --LYSGGSDGTIRLW 638
Score = 37 (18.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 332 RLLASASDDGMIKIWEL 348
R+LA AS +G+I + +L
Sbjct: 583 RVLAQASANGIIHLLDL 599
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 248 (92.4 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 98/361 (27%), Positives = 168/361 (46%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
++ GH + V S + P DG AS SGD+T+RIW+ CK+ H
Sbjct: 100 SIPGHGEPVISAQFSP----DGRG--LASGSGDQTMRIWDIELELPLHTCKS-----HKS 148
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V AWSP +A+A + CIW G+ + TL+ H+ + S++W + +
Sbjct: 149 WVLCIAWSPDATKIASACKNGEICIWNAKTGE-QIGKTLKRHKQWITSLAWQPMHKDPTC 207
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
LLA+CG+D +++IW+ + G C+S GH V ++W +++S S D T+K+W
Sbjct: 208 RLLASCGKDGNIFIWDTVQGTVVRCLS---GHTASVTCLRWGGE-GLIYSGSQDRTVKMW 263
Query: 191 WAED-----TDSDNWHCVQTIS-ESNNGHSSTIWALSFNA-KGDKLVSCSD------DLT 237
A+D + + H + T++ ++ ++ + S K D + C +
Sbjct: 264 RADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRCIKPDTVEECQKVAQTRYEAA 323
Query: 238 IKIWGADITRMQSG-DGYA--SW------RHLCTISGYHDRTIFSVHWSREG-IIASGAA 287
++I G + R+ SG D + W + + ++G H + + V +S + IAS +
Sbjct: 324 LEIAGGE--RLVSGSDDFTLFMWNPKETKQSINRMTG-HMQLVNQVVFSPDTRYIASASF 380
Query: 288 DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
D SV+ + G + K L + H V V WS + RLL S S D +K++E
Sbjct: 381 DKSVKLWC--------GRTGKYLASL-RGHVGPVYQVAWS-ADSRLLVSGSADSTLKVFE 430
Query: 348 L 348
L
Sbjct: 431 L 431
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/156 (25%), Positives = 71/156 (45%)
Query: 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW 145
G+ L + S D T +W + + + GH V V ++ +A+ DKSV +W
Sbjct: 329 GERLVSGSDDFTLFMWNPKETK-QSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLW 387
Query: 146 EVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT 205
G + ++ L+GH V V W +L S S D+T+KV+ + ++
Sbjct: 388 ---CGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELK---------TKS 435
Query: 206 ISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ GH ++ + ++ +G K+VS D +K+W
Sbjct: 436 LYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 125 (49.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 75/298 (25%), Positives = 121/298 (40%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+TL+ H + SLAW+P D + ASC D + IW+ + C + HT
Sbjct: 184 KTLKRHKQWITSLAWQPMHK-DPTCRLLASCGKDGNIFIWD-TVQGTVVRCLSG----HT 237
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
+V W G L+ + S D T +W G C + GH + + +++ N L
Sbjct: 238 ASVTCLRWGGEG-LIYSGSQDRTVKMWRADDG-VMC-RNMTGHAHWINTLALNTDYALRT 294
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAED 194
+C I P EC V Q + + + L S S D T+ +W ++
Sbjct: 295 SCFEPSKRCI---KPDTVEECQKVAQTRYEAALEIAGG---ERLVSGSDDFTLFMWNPKE 348
Query: 195 T-DSDN---WHCVQTISESN-NGHSSTIWALSFNAK--------GDKLVSCSDDL--TIK 239
T S N H +Q +++ + + I + SF+ G L S + +
Sbjct: 349 TKQSINRMTGH-MQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQ 407
Query: 240 I-WGADITRMQSGDGYASWR--HLCTISGYHDRT-----IFSVHWSREGI-IASGAAD 288
+ W AD + SG ++ + L T S Y+D +F+V WS EG + SG D
Sbjct: 408 VAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKD 465
Score = 122 (48.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 43/173 (24%), Positives = 71/173 (41%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ T + H V +AW P A + ++C + + IW + K + + H
Sbjct: 140 LHTCKSHKSWVLCIAWSPDA-----TKIASACKNGE-ICIWNAKTGEQIG--KTL--KRH 189
Query: 74 TRTVRSCAWSPSGK-----LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
+ + S AW P K LLA+ D IW+ V G V L GH V + W
Sbjct: 190 KQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTV--VRCLSGHTASVTCLRWGG 247
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181
G L+ + +D++V +W G C + + GHA + + + + SC
Sbjct: 248 EG-LIYSGSQDRTVKMWRADDG--VMCRN-MTGHAHWINTLALNTDYALRTSC 296
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 39/134 (29%), Positives = 59/134 (44%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ I + GH V + + P AS S DK+V++W R A L
Sbjct: 351 QSINRMTGHMQLVNQVVFSPDTRY------IASASFDKSVKLW----CGRTGKYLASLRG 400
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H V AWS +LL + S D+T ++E L GH +EV +V W+ GT
Sbjct: 401 -HVGPVYQVAWSADSRLLVSGSADSTLKVFELK--TKSLYYDLPGHGDEVFTVDWSPEGT 457
Query: 132 LLATCGRDKSVWIW 145
+ + G+DK + +W
Sbjct: 458 KVVSGGKDKVLKLW 471
Score = 94 (38.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 42/172 (24%), Positives = 68/172 (39%)
Query: 110 CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC-VSVLQGHAQDVKM 168
C A++ GH V S ++ G LA+ D+++ IW++ E E + + H V
Sbjct: 97 CSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDI----ELELPLHTCKSHKSWVLC 152
Query: 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228
+ W P + S + I +W A+ + +T+ +S W +
Sbjct: 153 IAWSPDATKIASACKNGEICIWNAKTGEQIG----KTLKRHKQWITSLAWQPMHKDPTCR 208
Query: 229 LV-SCSDDLTIKIWGA---DITRMQSGDGYA----SWRHLCTI-SGYHDRTI 271
L+ SC D I IW + R SG + W I SG DRT+
Sbjct: 209 LLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEGLIYSGSQDRTV 260
Score = 86 (35.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 258 RHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA 316
++L ++ G H ++ V WS + ++ SG+AD +++ F E K K L
Sbjct: 393 KYLASLRG-HVGPVYQVAWSADSRLLVSGSADSTLKVF-ELKT--------KSLYYDLPG 442
Query: 317 HDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H +V +V WSP E + S D ++K+W
Sbjct: 443 HGDEVFTVDWSP-EGTKVVSGGKDKVLKLW 471
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 249 (92.7 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 75/247 (30%), Positives = 111/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW + +S
Sbjct: 165 DGDVEIPPSKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENSNGG 218
Query: 64 NCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL E H + V S W+ G LLAT S+D IW + G +TL
Sbjct: 219 STQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGN---LASTL 275
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 276 GQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQNN 332
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
SCS D I V C + + ++ GH++ + A+ ++ G L SCSD
Sbjct: 333 T-TFASCSTDMCIHVC--------RLGCDRPV-KTFQGHTNEVNAIKWDPSGMLLASCSD 382
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 383 DMTLKIW 389
Score = 220 (82.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 77/286 (26%), Positives = 124/286 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 274 TLGQHKGPIFALKWNKKGNY------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 322
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ S D + +G D V T +GH NEV ++ W+ SG LLA+
Sbjct: 323 PALDVDWQ-NNTTFASCSTDMCIHVCR-LGCDRP-VKTFQGHTNEVNAIKWDPSGMLLAS 379
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + CV LQ H++++ ++W PT +L S S+D+T
Sbjct: 380 CSDDMTLKIWSM---KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDST 436
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D + C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 437 VRLW-----DVERGVCIHTLTK----HQEPVYSVAFSPDGKYLASGSFDKCVHIWNT--- 484
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG S+R G IF V W+ G + + A+D SV
Sbjct: 485 --QSGSLVHSYRGT---GG-----IFEVCWNARGDKVGASASDGSV 520
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 43/138 (31%), Positives = 62/138 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAP----VFASCSGDKTVRIWEQSASSRFWNCKAVL 69
+ L+ H+ ++++ W PT G P + AS S D TVR+W+ C L
Sbjct: 397 VHDLQAHSKEIYTIKWSPT-GPATSNPNSNIMLASASFDSTVRLWDVERGV----CIHTL 451
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H V S A+SP GK LA+ SFD IW G V + G + V WNA
Sbjct: 452 TK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSL--VHSYRG-TGGIFEVCWNAR 507
Query: 130 GTLLATCGRDKSVWIWEV 147
G + D SV + ++
Sbjct: 508 GDKVGASASDGSVCVLDL 525
Score = 136 (52.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 56/228 (24%), Positives = 103/228 (45%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
+A E++ + + A + + AT++ T AT+ G EN +++
Sbjct: 97 QAFREKLAQQQANAAAAAAAAAATATSTAATTPAAAAQQNPPKNGEATVNGEENGAHAIN 156
Query: 126 WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 185
N S + D V E+ P +VL+GH +V + W+P D+L S S D+
Sbjct: 157 -NHSKPMEI----DGDV---EIPPSK----ATVLRGHESEVFICAWNPVSDLLASGSGDS 204
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245
T ++W ++E++NG S+ + +G V + D+T W +D
Sbjct: 205 TARIW--------------NLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDG 250
Query: 246 TRMQSG--DGYAS-WR---HLCTISGYHDRTIFSVHWSREG--IIASG 285
T + +G DG+A W +L + G H IF++ W+++G I+++G
Sbjct: 251 TLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAG 298
Score = 133 (51.9 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 48/156 (30%), Positives = 71/156 (45%)
Query: 103 DVGGDYECV---AT-LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG-NEFECVS 157
++ GD E AT L GHE+EV +WN LLA+ D + IW + N
Sbjct: 163 EIDGDVEIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQL 222
Query: 158 VLQ------GHA----QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 207
VL+ GH +DV + W+ +L + SYD ++W T+ N T+
Sbjct: 223 VLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW----TEDGN--LASTLG 276
Query: 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
+ H I+AL +N KG+ ++S D T IW A
Sbjct: 277 Q----HKGPIFALKWNKKGNYILSAGVDKTTIIWDA 308
Score = 83 (34.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+K + H +VN+++W P LLAS SDD +KIW +
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSM 391
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 249 (92.7 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 75/247 (30%), Positives = 111/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW + +S
Sbjct: 165 DGDVEIPPSKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENSNGG 218
Query: 64 NCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL E H + V S W+ G LLAT S+D IW + G +TL
Sbjct: 219 STQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGN---LASTL 275
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 276 GQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQNN 332
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
SCS D I V C + + ++ GH++ + A+ ++ G L SCSD
Sbjct: 333 T-TFASCSTDMCIHVC--------RLGCDRPV-KTFQGHTNEVNAIKWDPSGMLLASCSD 382
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 383 DMTLKIW 389
Score = 220 (82.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 77/286 (26%), Positives = 124/286 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 274 TLGQHKGPIFALKWNKKGNY------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 322
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ S D + +G D V T +GH NEV ++ W+ SG LLA+
Sbjct: 323 PALDVDWQ-NNTTFASCSTDMCIHVCR-LGCDRP-VKTFQGHTNEVNAIKWDPSGMLLAS 379
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + CV LQ H++++ ++W PT +L S S+D+T
Sbjct: 380 CSDDMTLKIWSM---KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDST 436
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D + C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 437 VRLW-----DVERGVCIHTLTK----HQEPVYSVAFSPDGKYLASGSFDKCVHIWNT--- 484
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG S+R G IF V W+ G + + A+D SV
Sbjct: 485 --QSGSLVHSYRGT---GG-----IFEVCWNARGDKVGASASDGSV 520
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 43/138 (31%), Positives = 62/138 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAP----VFASCSGDKTVRIWEQSASSRFWNCKAVL 69
+ L+ H+ ++++ W PT G P + AS S D TVR+W+ C L
Sbjct: 397 VHDLQAHSKEIYTIKWSPT-GPATSNPNSNIMLASASFDSTVRLWDVERGV----CIHTL 451
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H V S A+SP GK LA+ SFD IW G V + G + V WNA
Sbjct: 452 TK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSL--VHSYRG-TGGIFEVCWNAR 507
Query: 130 GTLLATCGRDKSVWIWEV 147
G + D SV + ++
Sbjct: 508 GDKVGASASDGSVCVLDL 525
Score = 136 (52.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 56/228 (24%), Positives = 103/228 (45%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
+A E++ + + A + + AT++ T AT+ G EN +++
Sbjct: 97 QAFREKLAQQQANAAAAAAAAAATATSTAATTPAAAAQQNPPKNGEATVNGEENGAHAIN 156
Query: 126 WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 185
N S + D V E+ P +VL+GH +V + W+P D+L S S D+
Sbjct: 157 -NHSKPMEI----DGDV---EIPPSK----ATVLRGHESEVFICAWNPVSDLLASGSGDS 204
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245
T ++W ++E++NG S+ + +G V + D+T W +D
Sbjct: 205 TARIW--------------NLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDG 250
Query: 246 TRMQSG--DGYAS-WR---HLCTISGYHDRTIFSVHWSREG--IIASG 285
T + +G DG+A W +L + G H IF++ W+++G I+++G
Sbjct: 251 TLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAG 298
Score = 133 (51.9 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 48/156 (30%), Positives = 71/156 (45%)
Query: 103 DVGGDYECV---AT-LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG-NEFECVS 157
++ GD E AT L GHE+EV +WN LLA+ D + IW + N
Sbjct: 163 EIDGDVEIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQL 222
Query: 158 VLQ------GHA----QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 207
VL+ GH +DV + W+ +L + SYD ++W T+ N T+
Sbjct: 223 VLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW----TEDGN--LASTLG 276
Query: 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
+ H I+AL +N KG+ ++S D T IW A
Sbjct: 277 Q----HKGPIFALKWNKKGNYILSAGVDKTTIIWDA 308
Score = 83 (34.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+K + H +VN+++W P LLAS SDD +KIW +
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSM 391
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 249 (92.7 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 75/247 (30%), Positives = 111/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW + +S
Sbjct: 166 DGDVEIPPSKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENSNGG 219
Query: 64 NCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL E H + V S W+ G LLAT S+D IW + G +TL
Sbjct: 220 STQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGN---LASTL 276
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 277 GQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQNN 333
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
SCS D I V C + + ++ GH++ + A+ ++ G L SCSD
Sbjct: 334 T-TFASCSTDMCIHVC--------RLGCDRPV-KTFQGHTNEVNAIKWDPSGMLLASCSD 383
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 384 DMTLKIW 390
Score = 218 (81.8 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 77/286 (26%), Positives = 124/286 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 275 TLGQHKGPIFALKWNKKGNY------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 323
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ S D + +G D V T +GH NEV ++ W+ SG LLA+
Sbjct: 324 PALDVDWQ-NNTTFASCSTDMCIHVCR-LGCDRP-VKTFQGHTNEVNAIKWDPSGMLLAS 380
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + CV LQ H++++ ++W PT +L S S+D+T
Sbjct: 381 CSDDMTLKIWSM---KQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDST 437
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D + C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 438 VRLW-----DVERGVCLHTLTK----HQEPVYSVAFSPDGKYLASGSFDKCVHIWNT--- 485
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG S+R G IF V W+ G + + A+D SV
Sbjct: 486 --QSGSLVHSYRGT---GG-----IFEVCWNARGDKVGASASDGSV 521
Score = 171 (65.3 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 75/299 (25%), Positives = 121/299 (40%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEG-H 117
KA + H V CAW+P LLA+ S D+T IW GG + V EG H
Sbjct: 175 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGH 234
Query: 118 E----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 235 DVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGN---LASTLGQHKGPIFALKWNK 290
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + SCS
Sbjct: 291 KGNYILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQ-NNTTFASCS 340
Query: 234 DDLTIKIW--GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-S 290
D+ I + G D R + T G H + ++ W G++ + +DD +
Sbjct: 341 TDMCIHVCRLGCD-------------RPVKTFQG-HTNEVNAIKWDPSGMLLASCSDDMT 386
Query: 291 VQFFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
++ + +D + D ++ + K +P +LASAS D +++W++
Sbjct: 387 LKIWSMKQDTCVHDLQAHSKEIYTIKWSP--TGPATSNPNSSIMLASASFDSTVRLWDV 443
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/137 (29%), Positives = 61/137 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDG---VAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H+ ++++ W PT + + AS S D TVR+W+ C L
Sbjct: 398 VHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGV----CLHTLT 453
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP GK LA+ SFD IW G V + G + V WNA G
Sbjct: 454 K-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSL--VHSYRG-TGGIFEVCWNARG 509
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 510 DKVGASASDGSVCVLDL 526
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
AT+ G EN +++ N S + D V E+ P +VL+GH +V + W
Sbjct: 144 ATVNGEENGAHAIN-NHSKPMEI----DGDV---EIPPSK----ATVLRGHESEVFICAW 191
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
+P D+L S S D+T ++W ++E++NG S+ + +G V
Sbjct: 192 NPVSDLLASGSGDSTARIW--------------NLNENSNGGSTQLVLRHCIREGGHDVP 237
Query: 232 CSDDLTIKIWGADITRMQSG--DGYAS-WR---HLCTISGYHDRTIFSVHWSREG--IIA 283
+ D+T W +D T + +G DG+A W +L + G H IF++ W+++G I++
Sbjct: 238 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILS 297
Query: 284 SG 285
+G
Sbjct: 298 AG 299
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 249 (92.7 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 75/247 (30%), Positives = 111/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG E+ + L GH V+ AW P V+ + AS SGD T RIW + +S
Sbjct: 215 DGEVEIPSSKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENSNGG 268
Query: 64 NCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL E H + V S W+ +G LLAT S+D IW + G +TL
Sbjct: 269 STQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGN---LASTL 325
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 326 GQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQNN 382
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
SCS D I V C + + ++ GH++ + A+ ++ G L SCSD
Sbjct: 383 T-TFASCSTDMCIHVC--------RLGCDRPV-KTFQGHTNEVNAIKWDPSGMLLASCSD 432
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 433 DMTLKIW 439
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 76/286 (26%), Positives = 123/286 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 324 TLGQHKGPIFALKWNRKGNY------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 372
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ S D + +G D V T +GH NEV ++ W+ SG LLA+
Sbjct: 373 PALDVDWQ-NNTTFASCSTDMCIHVCR-LGCDRP-VKTFQGHTNEVNAIKWDPSGMLLAS 429
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + C+ LQ H +++ ++W PT +L S S+D+T
Sbjct: 430 CSDDMTLKIWSM---KQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDST 486
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D + C T+++ H +++++F+ G L S S D + IW
Sbjct: 487 VRLW-----DIERGVCTHTLTK----HQEPVYSVAFSPDGKYLASGSFDKCVHIWNT--- 534
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG+ S+R G IF V W+ G + + A+D SV
Sbjct: 535 --QSGNLVHSYRGT---GG-----IFEVCWNARGDKVGASASDGSV 570
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 75/299 (25%), Positives = 117/299 (39%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEG-H 117
KA + H V CAW+P LLA+ S D+T IW GG + V EG H
Sbjct: 224 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGH 283
Query: 118 E----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN +GTLLAT D IW GN S L H + ++W+
Sbjct: 284 DVPSNKDVTSLDWNTNGTLLATGSYDGFARIW-TEDGN---LASTLGQHKGPIFALKWNR 339
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + SCS
Sbjct: 340 KGNYILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQ-NNTTFASCS 389
Query: 234 DDLTIKIW--GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSV 291
D+ I + G D R + T G H + ++ W G++ + +DD
Sbjct: 390 TDMCIHVCRLGCD-------------RPVKTFQG-HTNEVNAIKWDPSGMLLASCSDDMT 435
Query: 292 QFFVESKDDLI--DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
K ++ D ++ + K +P +LASAS D +++W++
Sbjct: 436 LKIWSMKQEVCIHDLQAHNKEIYTIKWSP--TGPATSNPNSNIMLASASFDSTVRLWDI 492
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/138 (31%), Positives = 62/138 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAP----VFASCSGDKTVRIWEQSASSRFWNCKAVL 69
I L+ H ++++ W PT G P + AS S D TVR+W+ C L
Sbjct: 447 IHDLQAHNKEIYTIKWSPT-GPATSNPNSNIMLASASFDSTVRLWDIERGV----CTHTL 501
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H V S A+SP GK LA+ SFD IW G+ V + G + V WNA
Sbjct: 502 TK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNL--VHSYRG-TGGIFEVCWNAR 557
Query: 130 GTLLATCGRDKSVWIWEV 147
G + D SV + ++
Sbjct: 558 GDKVGASASDGSVCVLDL 575
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 51/182 (28%), Positives = 88/182 (48%)
Query: 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
AT+ G EN SV+ +A + D V I P ++ +VL+GH +V + W
Sbjct: 193 ATVNGEENRAHSVNNHAKPMEI-----DGEVEI----PSSK---ATVLRGHESEVFICAW 240
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
+P D+L S S D+T ++W ++E++NG S+ + +G V
Sbjct: 241 NPVSDLLASGSGDSTARIW--------------NLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 232 CSDDLTIKIWGADITRMQSG--DGYAS-WR---HLCTISGYHDRTIFSVHWSREG--IIA 283
+ D+T W + T + +G DG+A W +L + G H IF++ W+R+G I++
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILS 346
Query: 284 SG 285
+G
Sbjct: 347 AG 348
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 248 (92.4 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 75/247 (30%), Positives = 108/247 (43%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW S +S
Sbjct: 152 DGDVEIPSNKAVVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLSENSTSG 205
Query: 64 NCKAVLEEM---------HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ VL + V S W+ G LLAT S+D IW G +TL
Sbjct: 206 PTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN---LASTL 262
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQSN 319
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+ SCS D I V D ++T GH++ + A+ ++ G+ L SCSD
Sbjct: 320 -NTFASCSTDMCIHVC---KLGQDR--PIKTFQ----GHTNEVNAIKWDPTGNLLASCSD 369
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 370 DMTLKIW 376
Score = 224 (83.9 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 78/286 (27%), Positives = 122/286 (42%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 261 TLGQHKGPIFALKWNKKGNF------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 309
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W S A+ S D CI G + T +GH NEV ++ W+ +G LLA+
Sbjct: 310 PALDVDWQ-SNNTFASCSTDM--CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLAS 366
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + N CV LQ H +++ ++W PT +L S S+D+T
Sbjct: 367 CSDDMTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDST 423
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D D C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 424 VRLW-----DVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFDKCVHIWNT--- 471
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
Q+G S+R G IF V W+ G + + A+D SV
Sbjct: 472 --QTGALVHSYRGT---GG-----IFEVCWNAAGDKVGASASDGSV 507
Score = 200 (75.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 52/148 (35%), Positives = 75/148 (50%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I+T +GHT+ V ++ W PT + ASCS D T++IW NC L+
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNL------LASCSDDMTLKIWSMKQD----NCVHDLQA 389
Query: 72 MHTRTVRSCAWSPSGK---------LLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
H + + + WSP+G +LA+ASFD+T +W DV C+ TL H+ V
Sbjct: 390 -HNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW-DVDRGI-CIHTLTKHQEPVY 446
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPG 150
SV+++ G LA+ DK V IW G
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 172 (65.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 73/297 (24%), Positives = 124/297 (41%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEGHE 118
KAV+ H V CAW+P LLA+ S D+T IW G + V EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQ 220
Query: 119 N-----EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGN---LASTLGQHKGPIFALKWNK 276
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + + + SCS
Sbjct: 277 KGNFILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQSN-NTFASCS 326
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQ 292
D+ I + + G R + T G H + ++ W G + + +DD +++
Sbjct: 327 TDMCIHV-------CKLGQD----RPIKTFQG-HTNEVNAIKWDPTGNLLASCSDDMTLK 374
Query: 293 FFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ +D+ + D ++ + K + +P +LASAS D +++W++
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN--NPNANLMLASASFDSTVRLWDV 429
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H ++++ W PT G + + AS S D TVR+W+ C L
Sbjct: 384 VHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGI----CIHTLT 439
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP G+ LA+ SFD IW G V + G + V WNA+G
Sbjct: 440 K-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG--ALVHSYRG-TGGIFEVCWNAAG 495
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 496 DKVGASASDGSVCVLDL 512
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 248 (92.4 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 75/247 (30%), Positives = 108/247 (43%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW S +S
Sbjct: 152 DGDVEIPPNKAVVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLSENSTSG 205
Query: 64 NCKAVLEEM---------HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ VL + V S W+ G LLAT S+D IW G +TL
Sbjct: 206 PTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN---LASTL 262
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQSN 319
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+ SCS D I V D ++T GH++ + A+ ++ G+ L SCSD
Sbjct: 320 -NTFASCSTDMCIHVC---KLGQDR--PIKTFQ----GHTNEVNAIKWDPTGNLLASCSD 369
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 370 DMTLKIW 376
Score = 224 (83.9 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 78/286 (27%), Positives = 122/286 (42%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 261 TLGQHKGPIFALKWNKKGNF------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 309
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W S A+ S D CI G + T +GH NEV ++ W+ +G LLA+
Sbjct: 310 PALDVDWQ-SNNTFASCSTDM--CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLAS 366
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + N CV LQ H +++ ++W PT +L S S+D+T
Sbjct: 367 CSDDMTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDST 423
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D D C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 424 VRLW-----DVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFDKCVHIWNT--- 471
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
Q+G S+R G IF V W+ G + + A+D SV
Sbjct: 472 --QTGALVHSYRGT---GG-----IFEVCWNAAGDKVGASASDGSV 507
Score = 200 (75.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 52/148 (35%), Positives = 75/148 (50%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I+T +GHT+ V ++ W PT + ASCS D T++IW NC L+
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNL------LASCSDDMTLKIWSMKQD----NCVHDLQA 389
Query: 72 MHTRTVRSCAWSPSGK---------LLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
H + + + WSP+G +LA+ASFD+T +W DV C+ TL H+ V
Sbjct: 390 -HNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW-DVDRGI-CIHTLTKHQEPVY 446
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPG 150
SV+++ G LA+ DK V IW G
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 172 (65.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 73/297 (24%), Positives = 124/297 (41%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEGHE 118
KAV+ H V CAW+P LLA+ S D+T IW G + V EG +
Sbjct: 161 KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQ 220
Query: 119 N-----EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGN---LASTLGQHKGPIFALKWNK 276
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + + + SCS
Sbjct: 277 KGNFILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQSN-NTFASCS 326
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQ 292
D+ I + + G R + T G H + ++ W G + + +DD +++
Sbjct: 327 TDMCIHV-------CKLGQD----RPIKTFQG-HTNEVNAIKWDPTGNLLASCSDDMTLK 374
Query: 293 FFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ +D+ + D ++ + K + +P +LASAS D +++W++
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN--NPNANLMLASASFDSTVRLWDV 429
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H ++++ W PT G + + AS S D TVR+W+ C L
Sbjct: 384 VHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGI----CIHTLT 439
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP G+ LA+ SFD IW G V + G + V WNA+G
Sbjct: 440 K-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG--ALVHSYRG-TGGIFEVCWNAAG 495
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 496 DKVGASASDGSVCVLDL 512
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 226 (84.6 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 68/232 (29%), Positives = 104/232 (44%)
Query: 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77
+GH + SL P A+ S D + +W +R + H V
Sbjct: 15 KGHKAAITSLDLSPNG------KQLATASWDTFLMLWNFKPHARAYRYVG-----HKDVV 63
Query: 78 RSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
S +SP G LLA+AS D T +W D G + + + H V+SV ++A G LAT
Sbjct: 64 TSVQFSPHGNLLASASRDRTVRLWIPDKRGKF---SEFKAHTAPVRSVDFSADGQFLATA 120
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
DKS+ +W M F + L H V+ ++ P ++ SCS D TIK+W D
Sbjct: 121 SEDKSIKVWS-MYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW-----D 172
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248
+ N CV S+S G ++ + FN G + S D T+K+W + ++
Sbjct: 173 TTNKQCVNNFSDSV-GFANFV---DFNPSGTCIASAGSDQTVKVWDVRVNKL 220
Score = 199 (75.1 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 55/213 (25%), Positives = 95/213 (44%)
Query: 31 PTAGVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL 88
P VD A A+ S DK++++W ++ HT VR +SP G+L
Sbjct: 104 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-----HTHWVRCAKFSPDGRL 158
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
+ + S D T IW+ + +CV V +N SGT +A+ G D++V +W+V
Sbjct: 159 IVSCSEDKTIKIWDTT--NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
+ V H+ V + +HP+ + L + S D T+K+ D + T+
Sbjct: 217 VNKLLQHYQV---HSGGVNCISFHPSDNYLVTASSDGTLKI-----LDLLEGRLIYTLQ- 267
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH+ ++ +SF+ G+ S D + +W
Sbjct: 268 ---GHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
AS D+TV++W+ + + ++H+ V ++ PS L TAS D T I +
Sbjct: 202 ASAGSDQTVKVWDVRVNKLLQHY-----QVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
+ G + TL+GH V +VS++ G L A+ G D V +W +E C
Sbjct: 257 LLEG--RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTN-FDELHC 306
Score = 61 (26.5 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
LL+ + H VN + + P + L+ +AS DG +KI +L
Sbjct: 220 LLQHYQVHSGGVNCISFHPSDNYLV-TASSDGTLKILDL 257
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 245 (91.3 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 75/283 (26%), Positives = 131/283 (46%)
Query: 8 NYELREIQ-TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
+YE +++ TL+GHTD V +A +D SCS D ++++W+ + ++C
Sbjct: 134 DYETGQLERTLKGHTDAVNDIA------IDAAGKQLVSCSSDLSIKLWDFGQT---YDCL 184
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L+ H TV S + P+G + +AS D T W D+ Y CV T GH + V+ +
Sbjct: 185 KSLKG-HEHTVSSVTFLPTGDFVLSASRDHTIKQW-DISTGY-CVYTFRGHNDWVRMIRI 241
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP------------- 173
+ GTL A+ D++V +W + VL+ H V+ V+W P
Sbjct: 242 SNDGTLFASASLDQTVTVWSFATKS---AKLVLRDHEHAVECVEWAPDTAYTNVTGQQPE 298
Query: 174 --TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
+ +LFS S D +IK W D + T+ H + + L+F+ KG L+S
Sbjct: 299 GNSTHILFSGSRDRSIKAWNINTGD-----VLFTLL----AHENWVRGLAFHPKGKYLIS 349
Query: 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+DD T+++W +++ + + H + +H + F +
Sbjct: 350 VADDKTLRVW--ELSAQRCMKAIEAHEHFVSTVAFHQTSPFVI 390
Score = 214 (80.4 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 62/235 (26%), Positives = 107/235 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E Q L GH + + + P + + ASCS D T+++W+ K
Sbjct: 98 ETQKLTGHRLPITRVIFHP------LWTIMASCSEDATIKVWDYETGQLERTLKG----- 146
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT V A +GK L + S D + +W D G Y+C+ +L+GHE+ V SV++ +G
Sbjct: 147 HTDAVNDIAIDAAGKQLVSCSSDLSIKLW-DFGQTYDCLKSLKGHEHTVSSVTFLPTGDF 205
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW-W 191
+ + RD ++ W++ G CV +GH V+M++ + S S D T+ VW +
Sbjct: 206 VLSASRDHTIKQWDISTGY---CVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSF 262
Query: 192 AEDTDS----DNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
A + D+ H V+ + + + + + ++ S S D +IK W
Sbjct: 263 ATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAW 317
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 63/243 (25%), Positives = 107/243 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+++L+GH V S+ + PT D V S S D T++ W+ S + + H
Sbjct: 184 LKSLKGHEHTVSSVTFLPTG--DFVL----SASRDHTIKQWDISTGYCVYTFRG-----H 232
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW------- 126
VR S G L A+AS D T +W + V L HE+ V+ V W
Sbjct: 233 NDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV--LRDHEHAVECVEWAPDTAYT 290
Query: 127 NASGT--------LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
N +G +L + RD+S+ W + G + + L H V+ + +HP L
Sbjct: 291 NVTGQQPEGNSTHILFSGSRDRSIKAWNINTG---DVLFTLLAHENWVRGLAFHPKGKYL 347
Query: 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTI 238
S + D T++VW + C++ I E++ ST+ +F+ +++ S D++
Sbjct: 348 ISVADDKTLRVW-----ELSAQRCMKAI-EAHEHFVSTV---AFHQTSPFVITGSVDMSC 398
Query: 239 KIW 241
K+W
Sbjct: 399 KVW 401
Score = 142 (55.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 50/205 (24%), Positives = 91/205 (44%)
Query: 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209
G ++C+ L+GH V V + PT D + S S D+TIK W D +CV T
Sbjct: 178 GQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQW-----DISTGYCVYTF--- 229
Query: 210 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG-----ADITRMQSGDGYASWRHLCTIS 264
GH+ + + + G S S D T+ +W A + ++ + +
Sbjct: 230 -RGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV-LRDHEHAVECVEWAPDT 287
Query: 265 GYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
Y + T + I+ SG+ D S++ + + D++ + +L AH+ V +
Sbjct: 288 AYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVL----FTLL-----AHENWVRGL 338
Query: 325 QWSPGERRLLASASDDGMIKIWELA 349
+ P + + L S +DD +++WEL+
Sbjct: 339 AFHP-KGKYLISVADDKTLRVWELS 362
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 17 LEGHTDRVWSLAWKP-TA--GVDGVAP------VFASCSGDKTVRIWEQSASSRFWNCKA 67
L H V + W P TA V G P + S S D++++ W + + A
Sbjct: 271 LRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLA 330
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
H VR A+ P GK L + + D T +WE + C+ +E HE+ V +V+++
Sbjct: 331 -----HENWVRGLAFHPKGKYLISVADDKTLRVWE-LSAQ-RCMKAIEAHEHFVSTVAFH 383
Query: 128 ASGTLLATCGRDKSVWIWE 146
+ + T D S +WE
Sbjct: 384 QTSPFVITGSVDMSCKVWE 402
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 245 (91.3 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 68/231 (29%), Positives = 113/231 (48%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E+ TLEGH + V+++A+ G D +A + S DKT ++W + +
Sbjct: 126 ELNTLEGHRNVVYAIAFNNPYG-DKIA----TGSFDKTCKLWSVETGKCYHTFRG----- 175
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT + +++P L+AT S D T +W+ G E V TL GH E+ S+S+N SG
Sbjct: 176 HTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG--EEVYTLRGHSAEIISLSFNTSGDR 233
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ T D +V +W+ G + V++L GH ++ ++ ++ + S D T K+W
Sbjct: 234 IITGSFDHTVVVWDADTGRK---VNILIGHCAEISSASFNWDCSLILTGSMDKTCKLW-- 288
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
D+ N CV T++ GH I F+ G + + S D T +I+ A
Sbjct: 289 ---DATNGKCVATLT----GHDDEILDSCFDYTGKLIATASADGTARIFSA 332
Score = 235 (87.8 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 60/193 (31%), Positives = 100/193 (51%)
Query: 56 QSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE 115
Q+++ F+ K + + H + + A + SG T S+D T +W+ G E + TLE
Sbjct: 76 QNSNHTFYLFKVL--KAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASG--EELNTLE 131
Query: 116 GHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
GH N V ++++N G +AT DK+ +W V G +C +GH ++ + ++P
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG---KCYHTFRGHTAEIVCLSFNPQ 188
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
++ + S D T K+W D N V T+ GHS+ I +LSFN GD++++ S
Sbjct: 189 STLVATGSMDTTAKLW-----DIQNGEEVYTL----RGHSAEIISLSFNTSGDRIITGSF 239
Query: 235 DLTIKIWGADITR 247
D T+ +W AD R
Sbjct: 240 DHTVVVWDADTGR 252
Score = 214 (80.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R++ L GH + S A + + + S DKT ++W+ + C A L
Sbjct: 252 RKVNILIGHCAEISS------ASFNWDCSLILTGSMDKTCKLWDATNGK----CVATLTG 301
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
+ SC + +GKL+ATAS D T I+ +C+A LEGHE E+ +S+N G
Sbjct: 302 HDDEILDSC-FDYTGKLIATASADGTARIFS--AATRKCIAKLEGHEGEISKISFNPQGN 358
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L T DK+ IW+ G +C+ VL+GH ++ ++ +++ + S DNT ++W
Sbjct: 359 HLLTGSSDKTARIWDAQTG---QCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 70/237 (29%), Positives = 113/237 (47%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS-PSGKLLATASFDATTCI 100
F + S D+T ++W+ +AS N LE H V + A++ P G +AT SFD T +
Sbjct: 107 FITGSYDRTCKLWD-TASGEELN---TLEG-HRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W G +C T GH E+ +S+N TL+AT D + +W++ G E V L+
Sbjct: 162 WSVETG--KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEE---VYTLR 216
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN---WHCVQTISESNNGHSSTI 217
GH+ ++ + ++ + D + + S+D+T+ VW A+ N HC + S S N S I
Sbjct: 217 GHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLI 276
Query: 218 WALSFNAKGDKLVSCSDDLTIK-IWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
S + K KL ++ + + G D + S Y + + T S IFS
Sbjct: 277 LTGSMD-KTCKLWDATNGKCVATLTGHDDEILDSCFDYTG-KLIATASADGTARIFS 331
Score = 196 (74.1 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 63/224 (28%), Positives = 111/224 (49%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNASGT 131
H+ + S +++ SG + T SFD T +W+ D G V L GH E+ S S+N +
Sbjct: 218 HSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRK---VNILIGHCAEISSASFNWDCS 274
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L+ T DK+ +W+ G +CV+ L GH ++ + T ++ + S D T +++
Sbjct: 275 LILTGSMDKTCKLWDATNG---KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251
A C+ + GH I +SFN +G+ L++ S D T +IW A Q+G
Sbjct: 332 AATRK-----CIAKLE----GHEGEISKISFNPQGNHLLTGSSDKTARIWDA-----QTG 377
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294
+ L + G+ D IFS ++ +G I+ +G+ D++ + +
Sbjct: 378 ------QCLQVLEGHTDE-IFSCAFNYKGNIVITGSKDNTCRIW 414
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 230 (86.0 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 53/173 (30%), Positives = 87/173 (50%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
E HT + +S G LLA+AS D T +W +Y + EGH + + ++W++
Sbjct: 40 EGHTAAISCVKFSNDGNLLASASVDKTMILWSAT--NYSLIHRYEGHSSGISDLAWSSDS 97
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ D ++ IW+ + +EC+ VL+GH V V ++P +++ S S+D TI++W
Sbjct: 98 HYTCSASDDCTLRIWDAR--SPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
+ CV+ I HS I ++ FN G +VS S D + KIW A
Sbjct: 156 -----EVKTGKCVRMIK----AHSMPISSVHFNRDGSLIVSASHDGSCKIWDA 199
Score = 222 (83.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 56/183 (30%), Positives = 91/183 (49%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R ++TLEGHT + + + DG + AS S DKT+ +W + S E
Sbjct: 34 RHLKTLEGHTAAISCVKFSN----DG--NLLASASVDKTMILWSATNYSLIHRY-----E 82
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H+ + AWS +AS D T IW D YEC+ L GH N V V++N
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIW-DARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L+ + D+++ IWEV G +CV +++ H+ + V ++ ++ S S+D + K+W
Sbjct: 142 LIVSGSFDETIRIWEVKTG---KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
Query: 192 AED 194
A++
Sbjct: 199 AKE 201
Score = 196 (74.1 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 65/238 (27%), Positives = 108/238 (45%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L I EGH+ + LAW + S S D T+RIW+ A S + C
Sbjct: 74 NYSL--IHRYEGHSSGISDLAWSSDSHYT------CSASDDCTLRIWD--ARSPY-ECLK 122
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
VL HT V ++P L+ + SFD T IWE G +CV ++ H + SV +N
Sbjct: 123 VLRG-HTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG--KCVRMIKAHSMPISSVHFN 179
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDNT 186
G+L+ + D S IW+ G C+ L + V ++ P + + D+T
Sbjct: 180 RDGSLIVSASHDGSCKIWDAKEGT---CLKTLIDDKSPAVSFAKFSPNGKFILVATLDST 236
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS--FNAKGDK-LVSCSDDLTIKIW 241
+K+ N+ + + + GH++ ++ ++ F+ K +VS S+D + +W
Sbjct: 237 LKL--------SNYATGKFL-KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Score = 160 (61.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 108 YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167
Y + TLEGH + V ++ G LLA+ DK++ +W + + +GH+ +
Sbjct: 33 YRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA---TNYSLIHRYEGHSSGIS 89
Query: 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 227
+ W S S D T+++W D S + C++ + GH++ ++ ++FN +
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIW---DARSP-YECLKVL----RGHTNFVFCVNFNPPSN 141
Query: 228 KLVSCSDDLTIKIW 241
+VS S D TI+IW
Sbjct: 142 LIVSGSFDETIRIW 155
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/155 (25%), Positives = 69/155 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D + +IW+ + C L + + V +SP+GK + A+ D+T +
Sbjct: 184 LIVSASHDGSCKIWDAKEGT----CLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIWEVMPGNEFECVS 157
G + V T GH N+V ++ S G + + D V++W++ N +
Sbjct: 240 SNYATGKFLKVYT--GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARN---ILQ 294
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCS--YDNTIKVW 190
L+GH V V HP + + S D TI++W
Sbjct: 295 RLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 38 (18.4 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 332 RLLASASDDGMIKIWEL 348
+ + S S+D + +W+L
Sbjct: 271 KYIVSGSEDNCVYLWDL 287
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 226 (84.6 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 68/232 (29%), Positives = 104/232 (44%)
Query: 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77
+GH + SL P A+ S D + +W +R + H V
Sbjct: 15 KGHKAAITSLDLSPNG------KQLATASWDTFLMLWNFKPHARAYRYVG-----HKDVV 63
Query: 78 RSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
S +SP G LLA+AS D T +W D G + + + H V+SV ++A G LAT
Sbjct: 64 TSVQFSPHGNLLASASRDRTVRLWIPDKRGKF---SEFKAHTAPVRSVDFSADGQFLATA 120
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
DKS+ +W M F + L H V+ ++ P ++ SCS D TIK+W D
Sbjct: 121 SEDKSIKVWS-MYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW-----D 172
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248
+ N CV S+S G ++ + FN G + S D T+K+W + ++
Sbjct: 173 TTNKQCVNNFSDSV-GFANFV---DFNPSGTCIASAGSDQTVKVWDVRVNKL 220
Score = 203 (76.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 66/230 (28%), Positives = 111/230 (48%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT VRS +S G+ LATAS D + +W + + +L H + V+ ++ G L
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRF--LYSLYRHTHWVRCAKFSPDGRL 158
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ +C DK++ IW+ N+ +CV+ V ++P+ + S D T+KVW
Sbjct: 159 IVSCSEDKTIKIWDTT--NK-QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW-- 213
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
D V + + HS + +SF+ G+ L++ S D T+KI D+ +
Sbjct: 214 -DVR------VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI--LDLL-----E 259
Query: 253 GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDL 301
G R + T+ G H +F+V +S+ G + ASG AD V + + D+L
Sbjct: 260 G----RLIYTLQG-HTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
AS D+TV++W+ + + ++H+ V ++ PSG L TAS D T I +
Sbjct: 202 ASAGSDQTVKVWDVRVNKLLQHY-----QVHSGGVNCISFHPSGNYLITASSDGTLKILD 256
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
+ G + TL+GH V +VS++ G L A+ G D V +W +E C
Sbjct: 257 LLEG--RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTN-FDELHC 306
Score = 58 (25.5 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
LL+ + H VN + + P L+ +AS DG +KI +L
Sbjct: 220 LLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILDL 257
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 244 (91.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 6 DGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
DG+ E+ + L GH V+ AW P V+ + AS SGD T RIW + +
Sbjct: 158 DGDVEIPPNKATVLRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLNENGSRA 211
Query: 64 NCKAVL-----EEMH----TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL 114
+ + VL E H + V S W+ G LLAT S+D IW + G +TL
Sbjct: 212 STQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGN---LASTL 268
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
H+ + ++ WN G + + G DK+ IW+ G E H+ V W
Sbjct: 269 GQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQNN 325
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
SCS D I V C + + ++ GH++ + A+ ++ G L SCSD
Sbjct: 326 T-TFASCSTDMCIHVC--------RLGCDRPV-KTFQGHTNEVNAIKWDPSGMLLASCSD 375
Query: 235 DLTIKIW 241
D+T+KIW
Sbjct: 376 DMTLKIW 382
Score = 212 (79.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 76/286 (26%), Positives = 122/286 (42%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 267 TLGQHKGPIFALKWNKKGNY------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 315
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W + A+ S D + +G D V T +GH NEV ++ W+ SG LLA+
Sbjct: 316 PALDVDWQ-NNTTFASCSTDMCIHVCR-LGCDRP-VKTFQGHTNEVNAIKWDPSGMLLAS 372
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VLFSCSYDNT 186
C D ++ IW + + CV LQ H +++ ++W PT +L S S+D+T
Sbjct: 373 CSDDMTLKIWSM---KQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDST 429
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246
+++W D + C T+ + H +++++F+ G L S S D + IW
Sbjct: 430 VRLW-----DMEQGVCTHTLRK----HQEPVYSVAFSPDGKYLASGSFDKCVHIWNT--- 477
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG S++ G IF V W+ +G + + A+D SV
Sbjct: 478 --QSGSLVHSYQGT---GG-----IFEVCWNAQGDKVGASASDGSV 513
Score = 196 (74.1 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 57/187 (30%), Positives = 92/187 (49%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R ++T +GHT+ V ++ W P+ G+ + ASCS D T++IW + N +A
Sbjct: 346 RPVKTFQGHTNEVNAIKWDPS-GM-----LLASCSDDMTLKIWSMKQDACVHNLQA---- 395
Query: 72 MHTRTVRSCAWSPSGK---------LLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
H + + + WSP+G +LA+ASFD+T +W+ G C TL H+ V
Sbjct: 396 -HRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQG--VCTHTLRKHQEPVY 452
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182
SV+++ G LA+ DK V IW G+ V QG + V W+ D + + +
Sbjct: 453 SVAFSPDGKYLASGSFDKCVHIWNTQSGS---LVHSYQGTG-GIFEVCWNAQGDKVGASA 508
Query: 183 YDNTIKV 189
D ++ V
Sbjct: 509 SDGSVCV 515
Score = 163 (62.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 72/299 (24%), Positives = 120/299 (40%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE--DVGGDYECVATLE------GH 117
KA + H V CAW+P LLA+ S D+T IW + G L GH
Sbjct: 167 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGH 226
Query: 118 E----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 227 DVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TENGN---LASTLGQHKGPIFALKWNK 282
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + SCS
Sbjct: 283 KGNYILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQ-NNTTFASCS 332
Query: 234 DDLTIKIW--GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-S 290
D+ I + G D R + T G H + ++ W G++ + +DD +
Sbjct: 333 TDMCIHVCRLGCD-------------RPVKTFQG-HTNEVNAIKWDPSGMLLASCSDDMT 378
Query: 291 VQFFVESKDDLIDG-PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
++ + +D + +++ + K + +P +LASAS D +++W++
Sbjct: 379 LKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTS--NPNSSIMLASASFDSTVRLWDM 435
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 41/137 (29%), Positives = 61/137 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDG---VAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L+ H ++++ W PT + + AS S D TVR+W+ C L
Sbjct: 390 VHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGV----CTHTLR 445
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ H V S A+SP GK LA+ SFD IW G V + +G + V WNA G
Sbjct: 446 K-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSL--VHSYQG-TGGIFEVCWNAQG 501
Query: 131 TLLATCGRDKSVWIWEV 147
+ D SV + ++
Sbjct: 502 DKVGASASDGSVCVLDL 518
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 71/305 (23%), Positives = 123/305 (40%)
Query: 58 ASSRFWNCKAVLEEMHTRTV-RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG 116
+++R WN T+ V R C G ++ D T+ W G +AT G
Sbjct: 197 STARIWNLNENGSRASTQLVLRHCI--REGGHDVPSNKDVTSLDWNSDG---TLLAT--G 249
Query: 117 HENEVKSVSWNASGTLLATCGRDKS-VWI--WE-----VMPGNEFECVSVLQGHAQDVKM 168
+ + W +G L +T G+ K ++ W ++ + + H + K
Sbjct: 250 SYDGFARI-WTENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQ 308
Query: 169 -VQWH--PTMDVLFSCSYDNTIKVWWAEDTDSD--NWHCVQTISESNNGHSSTIWALSFN 223
+H P +DV + +NT + D C + + ++ GH++ + A+ ++
Sbjct: 309 QFPFHSAPALDVDWQ---NNTTFASCSTDMCIHVCRLGCDRPV-KTFQGHTNEVNAIKWD 364
Query: 224 AKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIA 283
G L SCSDD+T+KIW M+ A +L H + I+++ WS G
Sbjct: 365 PSGMLLASCSDDMTLKIWS-----MKQD---ACVHNLQA----HRKEIYTIKWSPTGPTT 412
Query: 284 SGAADDSVQFFVESKDDLID--GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG 341
S + S+ S D + + + H V SV +SP + + LAS S D
Sbjct: 413 SNP-NSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSP-DGKYLASGSFDK 470
Query: 342 MIKIW 346
+ IW
Sbjct: 471 CVHIW 475
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 70/222 (31%), Positives = 105/222 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH D V + + P+ + AS S DKTVRIW + ++ + HT TVR
Sbjct: 59 GHKDAVTCVNFSPSGHL------LASGSRDKTVRIWVPNVKG-----ESTVFRAHTATVR 107
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S + G+LL TAS D T +W + + +L H N V+ ++ G L+ +
Sbjct: 108 SVHFCSDGQLLVTASDDKTVKVWSTHRQRF--LFSLTQHINWVRCAKFSPDGRLIVSASD 165
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
DK+V +W+ ECV H V V +HP+ + + DNT+KVW D+
Sbjct: 166 DKTVKLWDK---TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW-----DTR 217
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
VQ HS+ + ALSF+ G+ L++ S D T+KI
Sbjct: 218 THRLVQHYQL----HSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 182 (69.1 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 48/180 (26%), Positives = 82/180 (45%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H VR +SP G+L+ +AS D T +W+ ECV + H V V ++ SGT
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYCEHGGFVTYVDFHPSGTC 201
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+A G D +V +W+ V Q H+ V + +HP+ + L + S D+T+K+
Sbjct: 202 IAAAGMDNTVKVWDT---RTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI--- 255
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
D + T+ +GH ++F+ G+ S D + +W ++ + GD
Sbjct: 256 --LDLMEGRLLYTL----HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDTVDYGD 309
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 59/195 (30%), Positives = 88/195 (45%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V +S + K LA+ S D+T IW T GH++ V V+++ SG L
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT--GHKDAVTCVNFSPSGHL 75
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+ RDK+V IW +P + E +V + H V+ V + +L + S D T+KVW
Sbjct: 76 LASGSRDKTVRIW--VPNVKGES-TVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW-- 130
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
+ H Q S H + + F+ G +VS SDD T+K+W D T +
Sbjct: 131 ------STHR-QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECVH 181
Query: 253 GYASWRHLCTISGYH 267
Y T +H
Sbjct: 182 SYCEHGGFVTYVDFH 196
Score = 159 (61.0 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 53/167 (31%), Positives = 74/167 (44%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW- 101
AS S D T+ IW SR + H V +SPSG LLA+ S D T IW
Sbjct: 35 ASGSMDSTLMIWHMKPQSRAYRFTG-----HKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
+V G+ H V+SV + + G LL T DK+V +W F S+ Q
Sbjct: 90 PNVKGES---TVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHR-QRF-LFSLTQ- 143
Query: 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
H V+ ++ P ++ S S D T+K+W D + CV + E
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLW-----DKTSRECVHSYCE 185
Score = 131 (51.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
+GH + V V ++ + LA+ D ++ IW + P + GH V V + P+
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSR---AYRFTGHKDAVTCVNFSPS 72
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+L S S D T+++W + ++ T+ + H++T+ ++ F + G LV+ SD
Sbjct: 73 GHLLASGSRDKTVRIW-VPNVKGES-----TVFRA---HTATVRSVHFCSDGQLLVTASD 123
Query: 235 DLTIKIW 241
D T+K+W
Sbjct: 124 DKTVKVW 130
Score = 123 (48.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 30/104 (28%), Positives = 56/104 (53%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
A+ D TV++W+ + + R ++H+ V + ++ PSG L TAS D+T I +
Sbjct: 203 AAAGMDNTVKVWD-TRTHRL----VQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146
+ G + TL GH+ +V+++ +G A+ G D+ V +W+
Sbjct: 258 LMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 227 (85.0 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 62/232 (26%), Positives = 105/232 (45%)
Query: 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCA 81
D+V+ L + +DG + + G++ + IW+ + N E++ C
Sbjct: 11 DKVFGLISTSNSILDGSGKLAITGCGER-ISIWD--LRKQVLNQSLYEEDIKAEVTNVCL 67
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
S G LLA+ D + IW DY+ A GH V ++++N G +L + +D
Sbjct: 68 -SKDGALLASGYSDGSIRIWSM--SDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTE 124
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
V +W+++ + + L+GH + V+ + L + S D IK+W DT++ H
Sbjct: 125 VIVWDIITESG---LFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIW---DTETQ--H 176
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG 253
C+QTI GH + IW + N +L SC+ D I+ W Q DG
Sbjct: 177 CIQTIV----GHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQREDG 224
Score = 178 (67.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 64/235 (27%), Positives = 106/235 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK-AVLEEM 72
+ +++ H VWSL P + GV S DK V+ W+ + N K VL
Sbjct: 470 VASIKAHEGSVWSLVLTPD--LRGVT----SGGADKLVKFWDFELIASQENSKHKVLNLS 523
Query: 73 HTRTVR------SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
T+T++ + +S K LA + D T I+ + +L GH+ V +
Sbjct: 524 LTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHL--SLYGHKLPVMCLDI 581
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
+ TL+ T DK++ IW + G +C H + V + P+ S S D
Sbjct: 582 SDDSTLIITGSADKNIKIWGLDYG---DCHKSFFAHDDSIMQVSFIPSTHHFISASKDKR 638
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
IK W D+D + +QTI E+++G +W+L+ + GD +S S D +I+I+
Sbjct: 639 IKYW-----DADKFEHIQTI-EAHHGE---VWSLAMGSVGDFFISGSHDRSIRIF 684
Score = 66 (28.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 25/86 (29%), Positives = 35/86 (40%)
Query: 266 YHDRTIF--SVHWSREGIIASGAADDSVQFFVESKDDLID--GPSYKMLLKKEKAHDMDV 321
Y D F S++ + ++ +DDS S D I G Y K AHD +
Sbjct: 559 YTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSI 618
Query: 322 NSVQWSPGERRLLASASDDGMIKIWE 347
V + P + SAS D IK W+
Sbjct: 619 MQVSFIPSTHHFI-SASKDKRIKYWD 643
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 242 (90.2 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 78/269 (28%), Positives = 122/269 (45%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTA---GVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
L E+Q GHTDRV L W P D A+ + D TV +W+ S S+
Sbjct: 204 LSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRL-- 261
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
E H V A+ PSG L +ASFD T +W DV E + EGH + S++
Sbjct: 262 ---EGHLARVGRVAFHPSGDYLVSASFDTTWRLW-DVHTGVELLMQ-EGHSEGIFSIACQ 316
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
G+L+++ G D IW++ G + VL H + + + W P L + S D+T+
Sbjct: 317 PDGSLVSSGGNDAIGRIWDLRSGKS---IMVLDEHIRQIVAMAWSPNGYQLATSSADDTV 373
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DKLVSCSD-DLTIKIWGA-D 244
K+W D TI HSS + + + G ++ ++ S D +K+W +
Sbjct: 374 KIW-----DLRKVSLAHTIP----AHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLN 424
Query: 245 ITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ ++S G+ + ++ GY DR I S
Sbjct: 425 CSLIKSMVGHEE--KVMSVDGYGDRFISS 451
Score = 186 (70.5 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 59/181 (32%), Positives = 87/181 (48%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E+ EGH++ ++S+A +P DG + +S D RIW+ + VL+E
Sbjct: 299 ELLMQEGHSEGIFSIACQP----DG--SLVSSGGNDAIGRIWDLRSGKSIM----VLDE- 347
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT- 131
H R + + AWSP+G LAT+S D T IW D+ T+ H + V V + SG
Sbjct: 348 HIRQIVAMAWSPNGYQLATSSADDTVKIW-DLR-KVSLAHTIPAHSSLVSDVRYIESGVN 405
Query: 132 -LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+AT G D V +W P N + + GH + V V + D S YD TIK+W
Sbjct: 406 RFIATSGYDGCVKLWN--PLN-CSLIKSMVGHEEKVMSVDGYG--DRFISSGYDRTIKLW 460
Query: 191 W 191
+
Sbjct: 461 Y 461
Score = 165 (63.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 46 SGDKTVRIWEQSASSRFWNC----KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101
SGD V + R W+ + +++E H+ + S A P G L+++ DA IW
Sbjct: 276 SGDYLVSA-SFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIW 334
Query: 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
+ G + + L+ H ++ +++W+ +G LAT D +V IW++ + +
Sbjct: 335 DLRSG--KSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSS 392
Query: 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 221
DV+ ++ + S YD +K+W + +C ++ +S GH + +S
Sbjct: 393 LVSDVRYIESGVNRFIATS-GYDGCVKLW-------NPLNC--SLIKSMVGHEEKV--MS 440
Query: 222 FNAKGDKLVSCSDDLTIKIW 241
+ GD+ +S D TIK+W
Sbjct: 441 VDGYGDRFISSGYDRTIKLW 460
Score = 151 (58.2 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 61/241 (25%), Positives = 104/241 (43%)
Query: 109 ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168
E + + G E + V ++ +G A+ V +W + V + +GH V
Sbjct: 163 ELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWN---SDNLSEVQLFRGHTDRVSG 219
Query: 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN-NGHSSTIWALSFNAKGD 227
+ W+P + S T+ A++T W Q+ GH + + ++F+ GD
Sbjct: 220 LDWYPLCQAWDADSEQLTLATGAADNTVC-LWKASQSTPLLRLEGHLARVGRVAFHPSGD 278
Query: 228 KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAA 287
LVS S D T ++W D+ +G L G H IFS+ +G + S
Sbjct: 279 YLVSASFDTTWRLW--DV---HTGV------ELLMQEG-HSEGIFSIACQPDGSLVSSGG 326
Query: 288 DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+D++ DL G S M+L + H + ++ WSP +L S++DD +KIW+
Sbjct: 327 NDAIGRIW----DLRSGKSI-MVLDE---HIRQIVAMAWSPNGYQLATSSADD-TVKIWD 377
Query: 348 L 348
L
Sbjct: 378 L 378
Score = 121 (47.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 42/176 (23%), Positives = 74/176 (42%)
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-------- 126
R + +S +G A+ S+ +W + V GH + V + W
Sbjct: 173 RPIAIVRFSNNGNHFASGSWGGQVKVWNS--DNLSEVQLFRGHTDRVSGLDWYPLCQAWD 230
Query: 127 -NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 185
++ LAT D +V +W+ + L+GH V V +HP+ D L S S+D
Sbjct: 231 ADSEQLTLATGAADNTVCLWKASQSTP---LLRLEGHLARVGRVAFHPSGDYLVSASFDT 287
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
T ++W D + V+ + + GHS I++++ G + S +D +IW
Sbjct: 288 TWRLW---DVHTG----VELLMQE--GHSEGIFSIACQPDGSLVSSGGNDAIGRIW 334
Score = 80 (33.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDG-PSYKMLLKKEKAHDMDVNSV 324
H R I ++ WS G +A+ +ADD+V+ + K L P++ L+ DV +
Sbjct: 348 HIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVS-------DVRYI 400
Query: 325 QWSPGERRLLASASDDGMIKIWELAN 350
+ G R +A++ DG +K+W N
Sbjct: 401 E--SGVNRFIATSGYDGCVKLWNPLN 424
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 243 (90.6 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 71/234 (30%), Positives = 102/234 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM---- 72
L GH V+ AW P V+ + AS SGD T RIW S SS + + VL
Sbjct: 161 LRGHESEVFICAWNP------VSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREG 214
Query: 73 -----HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ V S W+ G LLAT S+D IW G +TL H+ + ++ WN
Sbjct: 215 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN---LASTLGQHKGPIFALKWN 271
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
G + + G DK+ IW+ G E H+ V W + SCS D I
Sbjct: 272 KKGNFILSAGVDKTTIIWDAHTG---EAKQQFPFHSAPALDVDWQSN-NTFASCSTDMCI 327
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
V ++T GH++ + A+ ++ G+ L SCSDD+T+K+W
Sbjct: 328 HV-----CKLGQERPIKTFQ----GHTNEVNAIKWDPTGNLLASCSDDMTLKLW 372
Score = 220 (82.5 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 75/287 (26%), Positives = 125/287 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL H +++L W S DKT IW+ K H+
Sbjct: 257 TLGQHKGPIFALKWNKKGNF------ILSAGVDKTTIIWDAHTGE----AKQQFP-FHSA 305
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
W S A+ S D CI G + T +GH NEV ++ W+ +G LLA+
Sbjct: 306 PALDVDWQ-SNNTFASCSTDM--CIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLAS 362
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT--------MDVLF--SCSYDN 185
C D ++ +W + + CV LQ H++++ ++W PT +++ S S+D+
Sbjct: 363 CSDDMTLKLWSM---KQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDS 419
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245
T+++W D++ C+ T+++ H +++++F+ G L S S D + IW
Sbjct: 420 TVRLW-----DAERGACIHTLTK----HQEPVYSVAFSPDGRHLASGSFDKCVHIWNT-- 468
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
QSG S+R G IF V W+ G + + A+D SV
Sbjct: 469 ---QSGALVNSYRGT---GG-----IFEVCWNSTGDKVGASASDGSV 504
Score = 192 (72.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 57/188 (30%), Positives = 93/188 (49%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I+T +GHT+ V ++ W PT + ASCS D T+++W + C L+
Sbjct: 336 RPIKTFQGHTNEVNAIKWDPTGNL------LASCSDDMTLKLWSMKQDT----CVHDLQA 385
Query: 72 MHTRTVRSCAWSPSGK---------LLA-TASFDATTCIWEDVGGDYECVATLEGHENEV 121
H++ + + WSP+G +LA +ASFD+T +W+ G C+ TL H+ V
Sbjct: 386 -HSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERG--ACIHTLTKHQEPV 442
Query: 122 KSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181
SV+++ G LA+ DK V IW G V+ +G + V W+ T D + +
Sbjct: 443 YSVAFSPDGRHLASGSFDKCVHIWNTQSG---ALVNSYRGTG-GIFEVCWNSTGDKVGAS 498
Query: 182 SYDNTIKV 189
+ D ++ V
Sbjct: 499 ASDGSVCV 506
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 75/299 (25%), Positives = 118/299 (39%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE----DVGGDYECV---ATLEGHE 118
KA++ H V CAW+P LLA+ S D+T IW GG + V EG +
Sbjct: 157 KAMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQ 216
Query: 119 N-----EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
+ +V S+ WN+ GTLLAT D IW GN S L H + ++W+
Sbjct: 217 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGN---LASTLGQHKGPIFALKWNK 272
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ + S D T +W D+ Q HS+ + + + + SCS
Sbjct: 273 KGNFILSAGVDKTTIIW-----DAHTGEAKQQFPF----HSAPALDVDWQSN-NTFASCS 322
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQF 293
D+ I + + G R + T G H + ++ W G + + +DD
Sbjct: 323 TDMCIHV-------CKLGQE----RPIKTFQG-HTNEVNAIKWDPTGNLLASCSDDMTLK 370
Query: 294 FVESKDDL----IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLA-SASDDGMIKIWE 347
K D + S ++ K N+ P +LA SAS D +++W+
Sbjct: 371 LWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNN----PNANLMLARSASFDSTVRLWD 425
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDGVAP--VFA-SCSGDKTVRIWEQSASSRFWNCKAVL 69
+ L+ H+ ++++ W PT G + + A S S D TVR+W+ + C L
Sbjct: 380 VHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGA----CIHTL 435
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H V S A+SP G+ LA+ SFD IW G V + G + V WN++
Sbjct: 436 TK-HQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSG--ALVNSYRG-TGGIFEVCWNST 491
Query: 130 GTLLATCGRDKSVWIWEV 147
G + D SV + ++
Sbjct: 492 GDKVGASASDGSVCVLDL 509
Score = 133 (51.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 113 TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172
T G EN ++S N ++ D++V I P ++ VL+GH +V + W+
Sbjct: 126 TANGEENGAHTLS-NHHSDMMEV---DRAVEI----PASK---AMVLRGHESEVFICAWN 174
Query: 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232
P D+L S S D+T ++W +SES+ G S+ + +G + V
Sbjct: 175 PVSDLLASGSGDSTARIW--------------NLSESSTGGSTQLVLRHCIREGGQDVPS 220
Query: 233 SDDLTIKIWGADITRMQSG--DGYAS-WR---HLCTISGYHDRTIFSVHWSREG-IIASG 285
+ D+T W ++ T + +G DG+A W +L + G H IF++ W+++G I S
Sbjct: 221 NKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSA 280
Query: 286 AAD 288
D
Sbjct: 281 GVD 283
Score = 82 (33.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+K + H +VN+++W P LLAS SDD +K+W +
Sbjct: 338 IKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKLWSM 374
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 243 (90.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 64/232 (27%), Positives = 108/232 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ +EGHT RV + W P+ G +C D++ R+W+ A + +E H
Sbjct: 315 VADIEGHTVRVARVMWHPSGRFLGT-----TCY-DRSWRLWDLEAQEEILH-----QEGH 363
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ V A+ G L T DA +W+ G C+ LEGH E+ +S++ +G +
Sbjct: 364 SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG--RCIMFLEGHLKEIYGISFSPNGYHI 421
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWA 192
AT D + +W++ + CV + H V V++ P D L + +YDNT K+W
Sbjct: 422 ATGSGDNTCKVWDL---RQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW-- 476
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
W ++T++ GH + L ++ G + +CS D T K+W A+
Sbjct: 477 ---THPGWSPLKTLA----GHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 212 (79.7 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 14 IQTLEGHTDRVWSLAWKP--TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ TL GH V ++ + P T +D ASC+ D +V++W + + E
Sbjct: 265 LHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADI-----E 319
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT V W PSG+ L T +D + +W D+ E + EGH V ++++ G+
Sbjct: 320 GHTVRVARVMWHPSGRFLGTTCYDRSWRLW-DLEAQEE-ILHQEGHSMGVYDIAFHQDGS 377
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T G D +W++ G C+ L+GH +++ + + P + + S DNT KVW
Sbjct: 378 LAGTGGLDAFGRVWDLRTGR---CIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVW- 433
Query: 192 AEDTDSDNWHCVQTISESNN 211
D CV TI N
Sbjct: 434 ----DLRQRRCVYTIPAHQN 449
Score = 158 (60.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 49 KTVRIWEQSASSRFWN--CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG 106
+T ++ E S R N C + ++ R + C +SP+ K+LATA + +W
Sbjct: 206 RTSQMQELHKSLRSLNNFCSQIGDD---RPISYCHFSPNSKMLATACWSGLCKLWSVP-- 260
Query: 107 DYECVATLEGHENEVKSVSWNASGTL--------LATCGRDKSVWIWEVMPGNEFECVSV 158
D + TL GH V ++ ++ T+ LA+C D SV +W + + E V+
Sbjct: 261 DCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSL---DSDEPVAD 317
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
++GH V V WHP+ L + YD + ++W E + H GHS ++
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE-AQEEILH--------QEGHSMGVY 368
Query: 219 ALSFNAKGDKLVSCSDDLTIKIW 241
++F+ G + D ++W
Sbjct: 369 DIAFHQDGSLAGTGGLDAFGRVW 391
Score = 145 (56.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I LEGH ++ +++ P G A+ SGD T ++W+ R C +
Sbjct: 397 RCIMFLEGHLKEIYGISFSPN-GYH-----IATGSGDNTCKVWDL----RQRRCVYTIPA 446
Query: 72 MHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V + P G L T ++D T IW G + + TL GHE +V + ++ G
Sbjct: 447 -HQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG--WSPLKTLAGHEGKVMGLDISSDG 503
Query: 131 TLLATCGRDKSVWIW 145
L+ATC D++ +W
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 142 (55.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
LA+ + D + +W + D E VA +EGH V V W+ SG L T D+S +W++
Sbjct: 295 LASCAADGSVKLWS-LDSD-EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE 352
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
E + +GH+ V + +H + + D +VW D C+ +
Sbjct: 353 AQEE---ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-----DLRTGRCIMFLE- 403
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH I+ +SF+ G + + S D T K+W
Sbjct: 404 ---GHLKEIYGISFSPNGYHIATGSGDNTCKVW 433
Score = 48 (22.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 20/81 (24%), Positives = 36/81 (44%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H + I+ + +S G IA+G+ D++ + + DL + + AH V V+
Sbjct: 405 HLKEIYGISFSPNGYHIATGSGDNTCKVW-----DL----RQRRCVYTIPAHQNLVTGVK 455
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ P L + + D KIW
Sbjct: 456 FEPIHGDFLLTGAYDNTAKIW 476
Score = 39 (18.8 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
LK H+ V + S + +L+A+ S D K+W
Sbjct: 484 LKTLAGHEGKVMGLDIS-SDGQLIATCSYDRTFKLW 518
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 226 (84.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 74/246 (30%), Positives = 119/246 (48%)
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
L GH N + SV ++ S +L+ + D ++ +W+ G EFE L+GH V+ + +
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESG-EFE--RTLKGHTNAVQDIDFDK 158
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
T ++L SCS D TIK+W D + CV+T+ +GH + + F GD+L+S S
Sbjct: 159 TGNLLASCSADLTIKLW-----DFQTYDCVKTL----HGHDHNVSCVRFTPSGDQLISSS 209
Query: 234 DDLTIKIWGADITR-MQSGDGYASW-RHL-------CTISGYHDRTIFSVHWSREGIIAS 284
D TIK+W A +++ G+ W R + C S +D+TI + + + +A+
Sbjct: 210 RDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLAT 269
Query: 285 GAADDSV-QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMI 343
V + S ++ID P +L E + G+ LA+ S D I
Sbjct: 270 YREHSHVVECLAFSTANIIDIPG-SLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTI 328
Query: 344 KIWELA 349
KIWELA
Sbjct: 329 KIWELA 334
Score = 219 (82.2 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 63/211 (29%), Positives = 98/211 (46%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH + + S+ + P+ + S S D T+++W+ S F + L+
Sbjct: 98 EKHILTGHRNCINSVKFHPSFSL------MVSASEDATIKVWDFE-SGEF---ERTLKG- 146
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT V+ + +G LLA+ S D T +W+ Y+CV TL GH++ V V + SG
Sbjct: 147 HTNAVQDIDFDKTGNLLASCSADLTIKLWDFQ--TYDCVKTLHGHDHNVSCVRFTPSGDQ 204
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
L + RDK++ +WE G C+ L GH V+ + + SCS D TIK W
Sbjct: 205 LISSSRDKTIKVWEAATGY---CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW-- 259
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFN 223
+ C+ T E HS + L+F+
Sbjct: 260 ---NIVKGECLATYRE----HSHVVECLAFS 283
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 65/252 (25%), Positives = 102/252 (40%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS--------SRFWNC 65
++TL GH V + + P+ D + S S DKT+++WE + W
Sbjct: 183 VKTLHGHDHNVSCVRFTPSG--DQLI----SSSRDKTIKVWEAATGYCIKTLVGHEDWVR 236
Query: 66 KAVLEEMHTRTVRSCA-------WS-PSGKLLAT--ASFDATTCIWEDVGGDYECVATLE 115
K + E + + SC+ W+ G+ LAT C+ + +L
Sbjct: 237 KITVSEDGS-CIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLL 295
Query: 116 GHENEVKSVSWNASGTLLATCG------RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169
V G L+ CG RDK++ IWE+ G C++ GH V+ V
Sbjct: 296 STPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGR---CLATYIGHDNWVRAV 352
Query: 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229
++HP L S D TI+VW D C++TI+E+ H+ I L F +
Sbjct: 353 RFHPCGKFLLSVGDDKTIRVW-----DIAQGRCIKTINEA---HTHFISCLDFCLHNPHI 404
Query: 230 VSCSDDLTIKIW 241
+ D IK+W
Sbjct: 405 ATGGVDDVIKVW 416
Score = 155 (59.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 81/316 (25%), Positives = 130/316 (41%)
Query: 8 NYELREIQ-TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
++E E + TL+GHT+ V + + T + ASCS D T+++W+ ++C
Sbjct: 134 DFESGEFERTLKGHTNAVQDIDFDKTGNL------LASCSADLTIKLWDFQT----YDCV 183
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG-------------------- 106
L H V ++PSG L ++S D T +WE G
Sbjct: 184 KTLHG-HDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSE 242
Query: 107 DYECVATLEGHENEVKSVSWN-ASGTLLATCGRDKS--VWIWEVMPGNEFECVSVLQGHA 163
D C+A+ ++ +K+ WN G LAT R+ S V N + L
Sbjct: 243 DGSCIASCS-NDQTIKT--WNIVKGECLATY-REHSHVVECLAFSTANIIDIPGSLLSTP 298
Query: 164 QDVKMVQWHPTMDVLFSCSY------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
+ V+ P +++ C Y D TIK+W + C+ T GH + +
Sbjct: 299 EGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIW-----ELATGRCLATYI----GHDNWV 349
Query: 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS 277
A+ F+ G L+S DD TI++W DI A R + TI+ H I + +
Sbjct: 350 RAVRFHPCGKFLLSVGDDKTIRVW--DI---------AQGRCIKTINEAHTHFISCLDFC 398
Query: 278 REGI-IASGAADDSVQ 292
IA+G DD ++
Sbjct: 399 LHNPHIATGGVDDVIK 414
Score = 143 (55.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
+L GH + V++HP+ ++ S S D TIKVW D +S + +T+ GH++ +
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVW---DFESGEFE--RTLK----GHTNAV 151
Query: 218 WALSFNAKGDKLVSCSDDLTIKIW 241
+ F+ G+ L SCS DLTIK+W
Sbjct: 152 QDIDFDKTGNLLASCSADLTIKLW 175
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 31 PTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90
P + G A+ S DKT++IWE A+ R C A H VR+ + P GK L
Sbjct: 308 PGGNLVGQCGYLATGSRDKTIKIWEL-ATGR---CLATYIG-HDNWVRAVRFHPCGKFLL 362
Query: 91 TASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 147
+ D T +W+ G C+ T+ E H + + + + +AT G D + +W++
Sbjct: 363 SVGDDKTIRVWDIAQG--RCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 61 (26.5 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 280 GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 339
G +A+G+ D +++ + +L G + HD V +V++ P + LL S D
Sbjct: 317 GYLATGSRDKTIKIW-----ELATGRCLATYI----GHDNWVRAVRFHPCGKFLL-SVGD 366
Query: 340 DGMIKIWELA 349
D I++W++A
Sbjct: 367 DKTIRVWDIA 376
Score = 47 (21.6 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQFFVESKDDLIDGPSYKMLLKK 313
A+ R L T G HD + +V + G DD +++ + D+ G K +
Sbjct: 334 ATGRCLATYIG-HDNWVRAVRFHPCGKFLLSVGDDKTIRVW-----DIAQGRCIKTI--- 384
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+AH ++ + + + DD +IK+W+L
Sbjct: 385 NEAHTHFISCLDFCLHNPHIATGGVDD-VIKVWKL 418
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 222 (83.2 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 58/177 (32%), Positives = 87/177 (49%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLEGHENEVKSVSWNASGT 131
H V S +SP G LLA+AS D T +W D G + + + H V+SV ++A G
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF---SEFKAHTAPVRSVDFSADGQ 73
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
LAT DKS+ +W M F + L H V+ ++ P ++ SCS D TIK+W
Sbjct: 74 FLATASEDKSIKVWS-MYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW- 129
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248
D+ N CV S+S G ++ + FN G + S D T+K+W + ++
Sbjct: 130 ----DTTNKQCVNNFSDSV-GFANFV---DFNPSGTCIASAGSDQTVKVWDVRVNKL 178
Score = 203 (76.5 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 66/230 (28%), Positives = 111/230 (48%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT VRS +S G+ LATAS D + +W + + +L H + V+ ++ G L
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRF--LYSLYRHTHWVRCAKFSPDGRL 116
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ +C DK++ IW+ N+ +CV+ V ++P+ + S D T+KVW
Sbjct: 117 IVSCSEDKTIKIWDTT--NK-QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW-- 171
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
D V + + HS + +SF+ G+ L++ S D T+KI D+ +
Sbjct: 172 -DVR------VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI--LDLL-----E 217
Query: 253 GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDL 301
G R + T+ G H +F+V +S+ G + ASG AD V + + D+L
Sbjct: 218 G----RLIYTLQG-HTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 262
Score = 190 (71.9 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 52/172 (30%), Positives = 82/172 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH D V S+ + P + AS S D+TVR+W +F KA HT VR
Sbjct: 16 GHKDVVTSVQFSPHGNL------LASASRDRTVRLWIPDKRGKFSEFKA-----HTAPVR 64
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S +S G+ LATAS D + +W + + +L H + V+ ++ G L+ +C
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSE 122
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
DK++ IW+ N+ +CV+ V ++P+ + S D T+KVW
Sbjct: 123 DKTIKIWDTT--NK-QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
Score = 143 (55.4 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 43/140 (30%), Positives = 67/140 (47%)
Query: 116 GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175
GH++ V SV ++ G LLA+ RD++V +W +P + S + H V+ V +
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLW--IPDKRGK-FSEFKAHTAPVRSVDFSADG 72
Query: 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235
L + S D +IKVW + Q S H+ + F+ G +VSCS+D
Sbjct: 73 QFLATASEDKSIKVW-------SMYR--QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSED 123
Query: 236 LTIKIWGADITRMQSGDGYA 255
TIKIW D T Q + ++
Sbjct: 124 KTIKIW--DTTNKQCVNNFS 141
Score = 142 (55.0 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 51/194 (26%), Positives = 84/194 (43%)
Query: 9 YELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV 68
Y R + +L HT V + P DG + SCS DKT++IW+ + C
Sbjct: 90 YRQRFLYSLYRHTHWVRCAKFSP----DG--RLIVSCSEDKTIKIWDTTNKQ----CVNN 139
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
+ ++PSG +A+A D T +W DV + + + + H V +S++
Sbjct: 140 FSDS-VGFANFVDFNPSGTCIASAGSDQTVKVW-DVRVN-KLLQHYQVHSGGVNCISFHP 196
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188
SG L T D ++ I +++ G + LQGH V V + ++ S D +
Sbjct: 197 SGNYLITASSDGTLKILDLLEGR---LIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
Query: 189 VWWAEDTDSDNWHC 202
+W T+ D HC
Sbjct: 254 LW---RTNFDELHC 264
Score = 58 (25.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
LL+ + H VN + + P L+ +AS DG +KI +L
Sbjct: 178 LLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILDL 215
Score = 46 (21.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 322 NSVQWSPGERRLLASASDDGMIKIWEL 348
N V ++P +ASA D +K+W++
Sbjct: 148 NFVDFNPSGT-CIASAGSDQTVKVWDV 173
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 242 (90.2 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 87/299 (29%), Positives = 138/299 (46%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT V +CA+SP GK + D T IW D+ TL+GH N V V+W+
Sbjct: 139 HTEAVLNCAFSPDGKGFVSVGGDTTVRIW-DIYTSTP-THTLKGHTNWVLQVAWSPDSKK 196
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW---H--PTMDVLFSCSYDNTI 187
+AT G + + IW G + S L+GH + + + W H P L S S D+TI
Sbjct: 197 IATAGMEGDIRIWCPQTGKQLG--STLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTI 254
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
++W DT+S C +S S GH+ ++ L + +G + S S D T++++ R
Sbjct: 255 RIW---DTES----CKNLMSLS--GHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGR 304
Query: 248 M-QSGDGYASWRHLCTIS-GYHDRTIFSVHWSRE-------GIIASGAADD------SVQ 292
+ + DG+A W + ++ Y RT H +E +A +D ++
Sbjct: 305 LVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKSKGME 364
Query: 293 FFVESKDD---LIDGPSY-KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+ DD ++ PS K + + H +N V +SP + R ASAS D IK+W+
Sbjct: 365 ILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSP-DGRYFASASFDKSIKLWD 422
Score = 178 (67.7 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 51/191 (26%), Positives = 85/191 (44%)
Query: 4 LDDGNYEL--REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR 61
L G+Y+ +E TLE RV + + S S D TV +W S +
Sbjct: 327 LRTGSYDHTGKEYDTLE-EAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVT-- 383
Query: 62 FWNCKAVLEEM--HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN 119
K + + H + + ++SP G+ A+ASFD + +W+ G + + GH
Sbjct: 384 ----KTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKF--LGNFRGHVG 437
Query: 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179
V V W++ L + +D ++ IW++ + E L GHA +V V W P D +
Sbjct: 438 AVYQVCWSSDSRYLVSGSKDSTLKIWDIKT-KKME--KELPGHADEVYTVDWSPDGDRVA 494
Query: 180 SCSYDNTIKVW 190
S S D +++W
Sbjct: 495 SGSKDRLLRIW 505
Score = 151 (58.2 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 81 AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK 140
A S ++L + S D T +W ++ L GH+ + VS++ G A+ DK
Sbjct: 358 AKSKGMEILISGSDDFTVIMWNP-SVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDK 416
Query: 141 SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW 200
S+ +W+ G +F + +GH V V W L S S D+T+K+W D +
Sbjct: 417 SIKLWDGQSG-KF--LGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIW---DIKT--- 467
Query: 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ + + GH+ ++ + ++ GD++ S S D ++IW
Sbjct: 468 ---KKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 147 (56.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 55/185 (29%), Positives = 85/185 (45%)
Query: 9 YELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV 68
Y TL+GHT+ V +AW P D A GD +RIW + +
Sbjct: 170 YTSTPTHTLKGHTNWVLQVAWSP----DSKKIATAGMEGD--IRIWCPQTGKQLGS---T 220
Query: 69 LEEMHTRTVRSCAWSP---SGKL--LATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
L+ HT+ + +W P + K LA++S D+T IW+ + + +L GH V
Sbjct: 221 LKG-HTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTES--CKNLMSLSGHTMSVTC 277
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ W G L+ + +D++V ++ G V VL GHA V + + T VL + SY
Sbjct: 278 LKWGGEG-LIYSGSQDRTVRVFNTTDGR---LVRVLDGHAHWVNTLALN-TDYVLRTGSY 332
Query: 184 DNTIK 188
D+T K
Sbjct: 333 DHTGK 337
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/134 (29%), Positives = 62/134 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I L GH + +++ P DG FAS S DK++++W+ + N + H
Sbjct: 387 ISRLTGHQQLINLVSFSP----DG--RYFASASFDKSIKLWDGQSGKFLGNFRG-----H 435
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
V WS + L + S D+T IW+ E L GH +EV +V W+ G +
Sbjct: 436 VGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKME--KELPGHADEVYTVDWSPDGDRV 493
Query: 134 ATCGRDKSVWIWEV 147
A+ +D+ + IW V
Sbjct: 494 ASGSKDRLLRIWTV 507
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 65/262 (24%), Positives = 106/262 (40%)
Query: 110 CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169
C +++ GH V + +++ G + G D +V IW++ L+GH V V
Sbjct: 132 CASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTP---THTLKGHTNWVLQV 188
Query: 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT---ISESNNGHSSTIWALSF---- 222
W P + + + I++W C QT + + GH+ I LS+
Sbjct: 189 AWSPDSKKIATAGMEGDIRIW-----------CPQTGKQLGSTLKGHTKFITGLSWEPFH 237
Query: 223 -NAKGDKLVSCSDDLTIKIWGADITR-MQSGDGYA------SWRHLCTI-SGYHDRTI-- 271
N K +L S S D TI+IW + + + S G+ W I SG DRT+
Sbjct: 238 LNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRV 297
Query: 272 FSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK----EKAHDMDV---NSV 324
F+ R + G A V + D ++ SY K+ E+A + + N V
Sbjct: 298 FNTTDGRLVRVLDGHAH-WVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDV 356
Query: 325 QWSPGERRLLASASDDGMIKIW 346
+ +L S SDD + +W
Sbjct: 357 KAKSKGMEILISGSDDFTVIMW 378
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 55/202 (27%), Positives = 95/202 (47%)
Query: 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 147
+L T S+D T ++ + + + VA LE + N+VK+ S +L + D +V +W
Sbjct: 326 VLRTGSYDHTGKEYDTLE-EAQRVA-LERY-NDVKAKSKGME--ILISGSDDFTVIMWN- 379
Query: 148 MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 207
P +S L GH Q + +V + P S S+D +IK+W D S +
Sbjct: 380 -PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLW---DGQSGKF------L 429
Query: 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH 267
+ GH ++ + +++ LVS S D T+KIW +M+ + G+
Sbjct: 430 GNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEK-----------ELPGHA 478
Query: 268 DRTIFSVHWSREGI-IASGAAD 288
D +++V WS +G +ASG+ D
Sbjct: 479 DE-VYTVDWSPDGDRVASGSKD 499
Score = 83 (34.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKML 310
DG S + L G H ++ V WS + + SG+ D +++ + D+ K +
Sbjct: 422 DGQ-SGKFLGNFRG-HVGAVYQVCWSSDSRYLVSGSKDSTLKIW-----DI----KTKKM 470
Query: 311 LKKEKAHDMDVNSVQWSP-GERRLLASASDDGMIKIW 346
K+ H +V +V WSP G+R +AS S D +++IW
Sbjct: 471 EKELPGHADEVYTVDWSPDGDR--VASGSKDRLLRIW 505
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 244 (91.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 76/248 (30%), Positives = 118/248 (47%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA--V 68
+ ++ + H + + +++ PT D F S S D T+RIW+ F C+ V
Sbjct: 219 MNNVKMYQAHKEAIRGISFSPT---DSK---FVSGSDDGTLRIWD------FMRCQEERV 266
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFD--ATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
L H V+ W P ++ + S D IW+ G +ATL H++ V + W
Sbjct: 267 LRG-HGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGI--ALATLHAHKSTVMDLKW 323
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS--YD 184
N +G L T RD + ++++ N E V V +GH ++ V WHP + LF CS D
Sbjct: 324 NDNGNWLVTASRDHLLKLFDIR--NLREEVQVFRGHKKEASSVSWHPIHEGLF-CSGGSD 380
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
+I ++W TD + CV+T H S +W L+++ G L S S+D TIK W
Sbjct: 381 GSI-LFWNVGTDKEIG-CVET------AHDSIVWTLAWHPLGHILCSGSNDHTIKFW--- 429
Query: 245 ITRMQSGD 252
TR + GD
Sbjct: 430 -TRNRPGD 436
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 65/262 (24%), Positives = 119/262 (45%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+G V + SG+ T +W + +N + +L+ H +VR+ WS + + T
Sbjct: 157 EGRRLVTGASSGEFT--LW----NGLTFNFETILQA-HDISVRTMVWSHNDSWMVTGDHG 209
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
W+ + V + H+ ++ +S++ + + + D ++ IW+ M E
Sbjct: 210 GYVKYWQS---NMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEER- 265
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGH 213
VL+GH DVK V WHP ++ S S DN IK+W D + + T+ + H
Sbjct: 266 --VLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIW-----DPKSGIALATL----HAH 314
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIF 272
ST+ L +N G+ LV+ S D +K++ DI ++ + + + +H
Sbjct: 315 KSTVMDLKWNDNGNWLVTASRDHLLKLF--DIRNLREEVQVFRGHKKEASSVSWHP---- 368
Query: 273 SVHWSREGIIASGAADDSVQFF 294
+H EG+ SG +D S+ F+
Sbjct: 369 -IH---EGLFCSGGSDGSILFW 386
Score = 147 (56.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 72/317 (22%), Positives = 129/317 (40%)
Query: 57 SASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG 116
+ ++RF K +M + + AW+P G+ L T + +W + ++E + L+
Sbjct: 132 AVTTRF--VKTATNKMRC-PIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETI--LQA 186
Query: 117 HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176
H+ V+++ W+ + + + T V W+ N V + Q H + ++ + + PT
Sbjct: 187 HDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNN----VKMYQAHKEAIRGISFSPTDS 242
Query: 177 VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD- 235
S S D T+++W D C + GH + + + ++ + +VS S D
Sbjct: 243 KFVSGSDDGTLRIW-------DFMRCQE--ERVLRGHGADVKCVHWHPQKGMIVSGSKDN 293
Query: 236 -LTIKIW----GADITRMQSGDGYA---SWRH----LCTISGYHDRTIFSVHWSREGI-I 282
IKIW G + + + W L T S H +F + RE + +
Sbjct: 294 QQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQV 353
Query: 283 ASGAADD--SVQFFVESKDDLIDGPSYKMLL-------KK----EKAHDMDVNSVQWSPG 329
G + SV + + G S +L K+ E AHD V ++ W P
Sbjct: 354 FRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHP- 412
Query: 330 ERRLLASASDDGMIKIW 346
+L S S+D IK W
Sbjct: 413 LGHILCSGSNDHTIKFW 429
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 240 (89.5 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 63/232 (27%), Positives = 108/232 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ +EGHT RV + W P+ G +C D++ R+W+ A + +E H
Sbjct: 315 VADIEGHTVRVARVMWHPSGRFLGT-----TCY-DRSWRLWDLEAQEEILH-----QEGH 363
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ V A+ G L T DA +W+ G C+ LEGH E+ ++++ +G +
Sbjct: 364 SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG--RCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWA 192
AT D + +W++ + CV + H V V++ P D L + +YDNT K+W
Sbjct: 422 ATGSGDNTCKVWDL---RQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW-- 476
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
W ++T++ GH + L ++ G + +CS D T K+W A+
Sbjct: 477 ---THPGWSPLKTLA----GHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 212 (79.7 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 14 IQTLEGHTDRVWSLAWKP--TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ TL GH V ++ + P T +D ASC+ D +V++W + + E
Sbjct: 265 LHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADI-----E 319
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT V W PSG+ L T +D + +W D+ E + EGH V ++++ G+
Sbjct: 320 GHTVRVARVMWHPSGRFLGTTCYDRSWRLW-DLEAQEE-ILHQEGHSMGVYDIAFHQDGS 377
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T G D +W++ G C+ L+GH +++ + + P + + S DNT KVW
Sbjct: 378 LAGTGGLDAFGRVWDLRTGR---CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW- 433
Query: 192 AEDTDSDNWHCVQTISESNN 211
D CV TI N
Sbjct: 434 ----DLRQRRCVYTIPAHQN 449
Score = 158 (60.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 49 KTVRIWEQSASSRFWN--CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG 106
+T ++ E S R N C + ++ R + C +SP+ K+LATA + +W
Sbjct: 206 RTSQMQELHKSLRSLNNFCSQIGDD---RPISYCHFSPNSKMLATACWSGLCKLWSVP-- 260
Query: 107 DYECVATLEGHENEVKSVSWNASGTL--------LATCGRDKSVWIWEVMPGNEFECVSV 158
D + TL GH V ++ ++ T+ LA+C D SV +W + + E V+
Sbjct: 261 DCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSL---DSDEPVAD 317
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
++GH V V WHP+ L + YD + ++W E + H GHS ++
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE-AQEEILH--------QEGHSMGVY 368
Query: 219 ALSFNAKGDKLVSCSDDLTIKIW 241
++F+ G + D ++W
Sbjct: 369 DIAFHQDGSLAGTGGLDAFGRVW 391
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I LEGH ++ + + P G A+ SGD T ++W+ R C +
Sbjct: 397 RCIMFLEGHLKEIYGINFSPN-GYH-----IATGSGDNTCKVWDL----RQRRCVYTIPA 446
Query: 72 MHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V + P G L T ++D T IW G + + TL GHE +V + ++ G
Sbjct: 447 -HQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG--WSPLKTLAGHEGKVMGLDISSDG 503
Query: 131 TLLATCGRDKSVWIW 145
L+ATC D++ +W
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 139 (54.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 41/153 (26%), Positives = 69/153 (45%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
LA+ + D + +W + D E VA +EGH V V W+ SG L T D+S +W++
Sbjct: 295 LASCAADGSVKLWS-LDSD-EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE 352
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
E + +GH+ V + +H + + D +VW D C+ +
Sbjct: 353 AQEE---ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-----DLRTGRCIMFLE- 403
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH I+ ++F+ G + + S D T K+W
Sbjct: 404 ---GHLKEIYGINFSPNGYHIATGSGDNTCKVW 433
Score = 50 (22.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H + I+ +++S G IA+G+ D++ + + DL + + AH V V+
Sbjct: 405 HLKEIYGINFSPNGYHIATGSGDNTCKVW-----DL----RQRRCVYTIPAHQNLVTGVK 455
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ P L + + D KIW
Sbjct: 456 FEPIHGDFLLTGAYDNTAKIW 476
Score = 39 (18.8 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
LK H+ V + S + +L+A+ S D K+W
Sbjct: 484 LKTLAGHEGKVMGLDIS-SDGQLIATCSYDRTFKLW 518
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 207 (77.9 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 65/255 (25%), Positives = 119/255 (46%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM-- 72
QTL H V S+ + DG + AS S DKT+R + + + ++E
Sbjct: 18 QTLTSHNRAVSSVKFSS----DG--RLLASASADKTIRTYTINTIND--PIAEPVQEFTG 69
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + A+S + + +AS D T +W+ G + TL GH N V++N +
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSL--IKTLIGHTNYAFCVNFNPQSNM 127
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ + D++V IW+V G +C+ VL H+ V V ++ ++ S SYD ++W
Sbjct: 128 IVSGSFDETVRIWDVTTG---KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW-- 182
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR-MQSG 251
DS HCV+T+ + N S + F+ G ++ + D T+++W + +++
Sbjct: 183 ---DSGTGHCVKTLIDDENPPVSFV---RFSPNGKFILVGTLDNTLRLWNISSAKFLKTY 236
Query: 252 DGYASWRHLCTISGY 266
G+ + ++ C S +
Sbjct: 237 TGHVNAQY-CISSAF 250
Score = 175 (66.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 59/246 (23%), Positives = 112/246 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+Q GH + + +A+ A S S DKT+++W+ S K ++ H
Sbjct: 64 VQEFTGHENGISDVAFSSDARF------IVSASDDKTLKLWDVETGSLI---KTLIG--H 112
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
T ++P ++ + SFD T IW+ G +C+ L H + V +V +N G+L+
Sbjct: 113 TNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG--KCLKVLPAHSDPVTAVDFNRDGSLI 170
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ D IW+ G+ CV L V V++ P + + DNT+++W
Sbjct: 171 VSSSYDGLCRIWDSGTGH---CVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW-- 225
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALS--FNA-KGDKLVSCSDDLTIKIWGADITRM- 248
+ S + ++T + GH + + +S F+ G ++VS S+D + +W + ++
Sbjct: 226 -NISSAKF--LKTYT----GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
Query: 249 QSGDGY 254
Q +G+
Sbjct: 279 QKLEGH 284
Score = 153 (58.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 46/180 (25%), Positives = 79/180 (43%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++ L H+D V ++ + DG + S S D RIW+ +C L +
Sbjct: 148 LKVLPAHSDPVTAVDFNR----DG--SLIVSSSYDGLCRIWDSGTG----HCVKTLIDDE 197
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE---VKSVSWNASG 130
V +SP+GK + + D T +W + + T GH N + S +G
Sbjct: 198 NPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF--LKTYTGHVNAQYCISSAFSVTNG 255
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ + D V +WE+ N + + L+GH + V V HPT +++ S S D T+++W
Sbjct: 256 KRIVSGSEDNCVHMWEL---NSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 51/203 (25%), Positives = 90/203 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D+TVRIW+ + C VL H+ V + ++ G L+ ++S+D I
Sbjct: 127 MIVSGSFDETVRIWDVTTGK----CLKVLPA-HSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G CV TL EN V V ++ +G + D ++ +W + +F +
Sbjct: 182 WDS--GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSA-KF--LKTY 236
Query: 160 QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHC-VQTISESNNGHSSTIW 218
GH Q+ + FS + I V +ED W + + + GH+ T+
Sbjct: 237 TGHVN----AQY--CISSAFSVTNGKRI-VSGSEDNCVHMWELNSKKLLQKLEGHTETVM 289
Query: 219 ALSFNAKGDKLVSCSDDLTIKIW 241
++ + + + S S D T++IW
Sbjct: 290 NVACHPTENLIASGSLDKTVRIW 312
Score = 95 (38.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
L H + V V++ +L S S D TI+ + +T +D + + E GH + I
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTI-NTINDP--IAEPVQEFT-GHENGIS 75
Query: 219 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS- 277
++F++ +VS SDD T+K+W D+ ++G + T+ G H F V+++
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLW--DV---ETGS------LIKTLIG-HTNYAFCVNFNP 123
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKML 310
+ +I SG+ D++V+ + D+ G K+L
Sbjct: 124 QSNMIVSGSFDETVRIW-----DVTTGKCLKVL 151
Score = 61 (26.5 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 308 KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
K LL+K + H V +V P E L+AS S D ++IW
Sbjct: 275 KKLLQKLEGHTETVMNVACHPTEN-LIASGSLDKTVRIW 312
Score = 41 (19.5 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 329 GERRLLASASDDGMIKIWEL 348
G+R + S S+D + +WEL
Sbjct: 255 GKR--IVSGSEDNCVHMWEL 272
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 242 (90.2 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+ V V AS S D+TVR+W+ + S + LE H+ V S A+SP G+LLA+ SFD
Sbjct: 704 NSVWAVLASGSDDETVRLWDPATGS----LQQTLEG-HSGWVLSVAFSPDGRLLASGSFD 758
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
T +W+ G + TL GH N V+SV+++ G LLA+ DK+V +W+ G+
Sbjct: 759 KTVRLWDPATGSLQ--QTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGS---L 813
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L+GH+ V+ V + P +L S S+D T+++W
Sbjct: 814 QQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLW 848
Score = 226 (84.6 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 57/156 (36%), Positives = 88/156 (56%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
QTLEGH+ V S+A+ P DG + AS S DKTVR+W+ + S + H+
Sbjct: 731 QTLEGHSGWVLSVAFSP----DG--RLLASGSFDKTVRLWDPATGSLQQTLRG-----HS 779
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
VRS A+SP G+LLA+ SFD T +W+ G + TL GH + V+SV+++ G LLA
Sbjct: 780 NWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQ--QTLRGHSDTVRSVAFSPDGRLLA 837
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170
+ DK+V +W+ G + +++G +++ Q
Sbjct: 838 SGSFDKTVRLWDPATGT-LQQTLIIKGTVTELQFSQ 872
Score = 196 (74.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 51/154 (33%), Positives = 82/154 (53%)
Query: 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 147
+LA+ S D T +W+ G + TLEGH V SV+++ G LLA+ DK+V +W+
Sbjct: 709 VLASGSDDETVRLWDPATGSLQ--QTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDP 766
Query: 148 MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 207
G+ L+GH+ V+ V + P +L S S+D T+++W D QT+
Sbjct: 767 ATGS---LQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLW-----DPATGSLQQTL- 817
Query: 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GHS T+ +++F+ G L S S D T+++W
Sbjct: 818 ---RGHSDTVRSVAFSPDGRLLASGSFDKTVRLW 848
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/121 (35%), Positives = 68/121 (56%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
QTL GH++ V S+A+ P DG + AS S DKTVR+W+ + S + H+
Sbjct: 773 QTLRGHSNWVRSVAFSP----DG--RLLASGSFDKTVRLWDPATGSLQQTLRG-----HS 821
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
TVRS A+SP G+LLA+ SFD T +W+ G + ++G E++ ++ G+ ++
Sbjct: 822 DTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQ---FSQDGSYIS 878
Query: 135 T 135
T
Sbjct: 879 T 879
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 204 (76.9 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 59/202 (29%), Positives = 100/202 (49%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101
F +C+ + I + + SS K+ +E + T+ + A SP KLL +A +W
Sbjct: 33 FIACACGDVINIVDSTDSS----VKSTIEG-ESDTLTALALSPDDKLLFSAGHSRQIRVW 87
Query: 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
D+ +C+ + +GHE V ++ +ASG LLAT G D+ V +W+V G F C +G
Sbjct: 88 -DLE-TLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGG--F-CTHYFRG 142
Query: 162 HAQDVKMVQWHP--TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 219
H V + +HP ++L S S D T++VW +++ C+ I E H S + +
Sbjct: 143 HKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEK-KCL-AIMEK---HFSAVTS 197
Query: 220 LSFNAKGDKLVSCSDDLTIKIW 241
++ + G L S D + +W
Sbjct: 198 IALSEDGLTLFSAGRDKVVNLW 219
Score = 203 (76.5 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 57/218 (26%), Positives = 92/218 (42%)
Query: 42 FASCSGDKTVRIWEQSA----SSRFWNCKA-VLEEMHTRTVRSCAWSPSGKLLATASFDA 96
F S SGD+T+++W S N K + H + + S A + + L+ T S D
Sbjct: 462 FVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDR 521
Query: 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156
T IW D V TL+GH+ + SV ++ + T DK+V IW + G+ C+
Sbjct: 522 TASIWRLP--DLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGS---CL 576
Query: 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
+GH V + SC D +K+W ++ C+ T + H
Sbjct: 577 KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE-----CIATYDQ----HEDK 627
Query: 217 IWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGY 254
+WAL+ K + + + D I +W D T D +
Sbjct: 628 VWALAVGKKTEMIATGGGDAVINLWH-DSTASDKEDDF 664
Score = 173 (66.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 62/237 (26%), Positives = 108/237 (45%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRT 76
L GH + V SL T + + S DKTVR+W +A+S+ +C V H
Sbjct: 397 LAGHKEVVLSL---DTCVSSSGNVLIVTGSKDKTVRLW--NATSK--SCIGV-GTGHNGD 448
Query: 77 VRSCAWSP-SGKLLATASFDATTCIW--EDVGGDYECVATLE------GHENEVKSVSWN 127
+ + A++ S + S D T +W + + D E L+ H+ ++ SV+
Sbjct: 449 ILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVA 508
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
+ +L+ T D++ IW +P + V L+GH + + V++ + + S D T+
Sbjct: 509 RNDSLVCTGSEDRTASIWR-LP--DLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTV 565
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
K+W D C++T GH+S++ SF G + VSC D +K+W +
Sbjct: 566 KIWAISDGS-----CLKTFE----GHTSSVLRASFITDGTQFVSCGADGLLKLWNVN 613
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 75/352 (21%), Positives = 149/352 (42%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
T+EG +D + +LA P D + +F S + +R+W+ + K H
Sbjct: 55 TIEGESDTLTALALSPD---DKL--LF-SAGHSRQIRVWDLETLKCIRSWKG-----HEG 103
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN--ASGTLL 133
V A SG LLATA D +W DV G + C GH+ V S+ ++ ++ +L
Sbjct: 104 PVMGMACHASGGLLATAGADRKVLVW-DVDGGF-CTHYFRGHKGVVSSILFHPDSNKNIL 161
Query: 134 ATCGRDKSVWIWEVMPGN-EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+ D +V +W++ N E +C+++++ H V + LFS D + +W
Sbjct: 162 ISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Query: 193 EDTDSD----NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT--IKIWGADIT 246
D + ++ ++ ++G + S + K K T I + +
Sbjct: 222 HDYSCKATVATYEVLEAVTTVSSGTPFASFVASLDQKKSKKKESDSQATYFITVGERGVV 281
Query: 247 RMQSGDG----YASWRHLCTISGYHDR-----TIFSVHWSREGIIASGAADDSVQFFVES 297
R+ +G Y T+S + T ++ S G++ AD QFF S
Sbjct: 282 RIWKSEGSICLYEQKSSDITVSSDDEESKRGFTAAAMLPSDHGLLCV-TADQ--QFFFYS 338
Query: 298 KDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
+ ++ +L K+ ++ ++ +++ E + LA A++ ++++++A
Sbjct: 339 VVENVEETEL-VLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVA 389
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/136 (29%), Positives = 66/136 (48%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
+L + TL+GH R++S+ + VD + SGDKTV+IW S S C
Sbjct: 530 DLVHVVTLKGHKRRIFSVEFST---VDQCV---MTASGDKTVKIWAISDGS----CLKTF 579
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
E HT +V ++ G + D +W +V EC+AT + HE++V +++
Sbjct: 580 EG-HTSSVLRASFITDGTQFVSCGADGLLKLW-NVNTS-ECIATYDQHEDKVWALAVGKK 636
Query: 130 GTLLATCGRDKSVWIW 145
++AT G D + +W
Sbjct: 637 TEMIATGGGDAVINLW 652
Score = 121 (47.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 41/149 (27%), Positives = 71/149 (47%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
L+ I++ +GH V +A + G+ A+ D+ V +W+ F C
Sbjct: 92 LKCIRSWKGHEGPVMGMACHASGGL------LATAGADRKVLVWDVDGG--F--CTHYFR 141
Query: 71 EMHTRTVRSCAWSP-SGK-LLATASFDATTCIWEDVGGDYE--CVATLEGHENEVKSVSW 126
H V S + P S K +L + S DAT +W+ + E C+A +E H + V S++
Sbjct: 142 G-HKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIAL 200
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFEC 155
+ G L + GRDK V +W++ +++ C
Sbjct: 201 SEDGLTLFSAGRDKVVNLWDL---HDYSC 226
Score = 85 (35.0 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 38/145 (26%), Positives = 69/145 (47%)
Query: 212 GHSSTIWALS--FNAKGDKL-VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHD 268
GH + +L ++ G+ L V+ S D T+++W A ++ G G +G H+
Sbjct: 399 GHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVG----------TG-HN 446
Query: 269 RTIFSVHWSREGI--IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK---AHDMDVNS 323
I +V ++++ SG+ D +++ V S D + + + LK AHD D+NS
Sbjct: 447 GDILAVAFAKKSFSFFVSGSGDRTLK--VWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 324 VQWSPGERRLLASASDDGMIKIWEL 348
V + + L+ + S+D IW L
Sbjct: 505 VAVARNDS-LVCTGSEDRTASIWRL 528
Score = 70 (29.7 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 250 SGDGYAS-WR-----HLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLI 302
S D AS WR H+ T+ G H R IFSV +S + + + + D +V+ + S
Sbjct: 518 SEDRTASIWRLPDLVHVVTLKG-HKRRIFSVEFSTVDQCVMTASGDKTVKIWAIS----- 571
Query: 303 DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351
DG LK + H V + + + S DG++K+W + NT
Sbjct: 572 DGSC----LKTFEGHTSSVLRASFITDGTQFV-SCGADGLLKLWNV-NT 614
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 236 (88.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 62/232 (26%), Positives = 108/232 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ +EGHT RV + W P+ G +C D++ R+W+ A + +E H
Sbjct: 315 VADIEGHTVRVARVTWHPSGRFLGT-----TCY-DRSWRLWDLEAQEEILH-----QEGH 363
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ V A+ G L T DA +W+ G C+ LEGH E+ ++++ +G +
Sbjct: 364 SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG--RCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWA 192
AT D + +W++ + CV + H V V++ P + L + +YDNT K+W
Sbjct: 422 ATGSGDNTCKVWDL---RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW-- 476
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
W ++T++ GH + L ++ G + +CS D T K+W A+
Sbjct: 477 ---THPGWSPLKTLA----GHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 213 (80.0 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 14 IQTLEGHTDRVWSLAWKP--TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ TL GH V ++ + P T +D ASC+ D +V++W + + E
Sbjct: 265 LHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADI-----E 319
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT V W PSG+ L T +D + +W D+ E + EGH V ++++ G+
Sbjct: 320 GHTVRVARVTWHPSGRFLGTTCYDRSWRLW-DLEAQEE-ILHQEGHSMGVYDIAFHQDGS 377
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T G D +W++ G C+ L+GH +++ + + P + + S DNT KVW
Sbjct: 378 LAGTGGLDAFGRVWDLRTGR---CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW- 433
Query: 192 AEDTDSDNWHCVQTISESNN 211
D CV TI N
Sbjct: 434 ----DLRQRRCVYTIPAHQN 449
Score = 157 (60.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 49 KTVRIWEQSASSRFWN--CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG 106
+T ++ E S R N C + ++ R + C +SP+ K+LATA + +W
Sbjct: 206 RTSQMQELHKSLRSLNNFCSQIGDD---RPISYCHFSPNSKMLATACWSGLCKLWSVP-- 260
Query: 107 DYECVATLEGHENEVKSVSWNASGTL--------LATCGRDKSVWIWEVMPGNEFECVSV 158
D + TL GH V ++ ++ T+ LA+C D SV +W + + E V+
Sbjct: 261 DCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSL---DSDEPVAD 317
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
++GH V V WHP+ L + YD + ++W E + H GHS ++
Sbjct: 318 IEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLE-AQEEILH--------QEGHSMGVY 368
Query: 219 ALSFNAKGDKLVSCSDDLTIKIW 241
++F+ G + D ++W
Sbjct: 369 DIAFHQDGSLAGTGGLDAFGRVW 391
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I LEGH ++ + + P G A+ SGD T ++W+ R C +
Sbjct: 397 RCIMFLEGHLKEIYGINFSPN-GYH-----IATGSGDNTCKVWDL----RQRRCVYTIPA 446
Query: 72 MHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V + P G L T ++D T IW G + + TL GHE +V + ++ G
Sbjct: 447 -HQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG--WSPLKTLAGHEGKVMGLDISSDG 503
Query: 131 TLLATCGRDKSVWIW 145
L+ATC D++ +W
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 141 (54.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
LA+ + D + +W + D E VA +EGH V V+W+ SG L T D+S +W++
Sbjct: 295 LASCAADGSVKLWS-LDSD-EPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLE 352
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
E + +GH+ V + +H + + D +VW D C+ +
Sbjct: 353 AQEE---ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-----DLRTGRCIMFLE- 403
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH I+ ++F+ G + + S D T K+W
Sbjct: 404 ---GHLKEIYGINFSPNGYHIATGSGDNTCKVW 433
Score = 52 (23.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H + I+ +++S G IA+G+ D++ + + DL + + AH V V+
Sbjct: 405 HLKEIYGINFSPNGYHIATGSGDNTCKVW-----DL----RQRRCVYTIPAHQNLVTGVK 455
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ P L + + D KIW
Sbjct: 456 FEPIHGNFLLTGAYDNTAKIW 476
Score = 39 (18.8 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
LK H+ V + S + +L+A+ S D K+W
Sbjct: 484 LKTLAGHEGKVMGLDIS-SDGQLIATCSYDRTFKLW 518
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 67/235 (28%), Positives = 116/235 (49%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
Q L GHTD + S+ V +FA+C+ DK+VR+W SS +C A H+
Sbjct: 380 QILHGHTDTILSI------DVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQ-GTGHS 432
Query: 75 RTVRSCAWSP-SGKLLATASFDATTCIW---EDVGGD----YECVATLEGHENEVKSVSW 126
V S A S + + + S D T +W E G + + +T HE +V SV
Sbjct: 433 NAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCV 492
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
+ + LLA+ +D++ +W + ++ + V +GH + V VQ+ P +L S S D +
Sbjct: 493 SPNDKLLASGSQDRTAKLWAL---SDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGS 549
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+++W +D + C++T GH +++ + F ++G +LVS D +K+W
Sbjct: 550 VRIWSIQD-----FSCLKTFE----GHDASVLKIIFVSRGTQLVSSGSDGLVKLW 595
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 60/202 (29%), Positives = 90/202 (44%)
Query: 44 SCSGDKTVRIW---EQSASSRFWNCKA-VLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
S S D TV++W E + + KA E H + V S SP+ KLLA+ S D T
Sbjct: 450 SGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAK 509
Query: 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
+W D + GH V SV ++ +L + D SV IW + +F C+
Sbjct: 510 LW--ALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQ---DFSCLKTF 564
Query: 160 QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 219
+GH V + + L S D +K+W T N CV+T+ + H +WA
Sbjct: 565 EGHDASVLKIIFVSRGTQLVSSGSDGLVKLW----TIKTN-ECVRTL----DAHQDKVWA 615
Query: 220 LSFNAKGDKLVSCSDDLTIKIW 241
L + + +V+ S D TI +W
Sbjct: 616 LHGGCRDELMVTGSADSTITVW 637
Score = 173 (66.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ AS S D+T ++W S C+ H R V S +SP ++L +AS D + I
Sbjct: 498 LLASGSQDRTAKLWALSDLRLLGVCRG-----HRRGVWSVQFSPVDQILGSASADGSVRI 552
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W D+ C+ T EGH+ V + + + GT L + G D V +W + ECV L
Sbjct: 553 WSIQ--DFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTN---ECVRTLD 607
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
H V + +++ + S D+TI VW
Sbjct: 608 AHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
+L GH + + + +C+ D +++VW D S HCV GHS+ +
Sbjct: 381 ILHGHTDTILSIDVFRKGSMFATCAKDKSVRVW-RMDVSSGRVHCVA----QGTGHSNAV 435
Query: 218 WALSFNA-KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHW 276
+++ + K +VS S D T+K+W D+ +G + T H++ + SV
Sbjct: 436 GSIACSRMKQQFVVSGSQDCTVKVW--DLPETTGAEGVMMMKARSTERA-HEKDVNSVCV 492
Query: 277 S-REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLA 335
S + ++ASG+ D + + + S DL LL + H V SVQ+SP ++ +L
Sbjct: 493 SPNDKLLASGSQDRTAKLWALS--DL-------RLLGVCRGHRRGVWSVQFSPVDQ-ILG 542
Query: 336 SASDDGMIKIWEL 348
SAS DG ++IW +
Sbjct: 543 SASADGSVRIWSI 555
Score = 157 (60.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY-HDR 269
+GH+ TI ++ KG +C+ D ++++W D++ SG R C G H
Sbjct: 383 HGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVS---SG------RVHCVAQGTGHSN 433
Query: 270 TIFSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327
+ S+ SR + + SG+ D +V+ + + +G E+AH+ DVNSV S
Sbjct: 434 AVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVS 493
Query: 328 PGERRLLASASDDGMIKIWELAN 350
P ++ LLAS S D K+W L++
Sbjct: 494 PNDK-LLASGSQDRTAKLWALSD 515
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/184 (26%), Positives = 80/184 (43%)
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV-MPGNEFECVSVLQGHAQDVKMVQW- 171
L GH + + S+ G++ ATC +DKSV +W + + CV+ GH+ V +
Sbjct: 382 LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACS 441
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
+ S S D T+KVW +T + + H + ++ + L S
Sbjct: 442 RMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLAS 501
Query: 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDS 290
S D T K+W R+ +C G H R ++SV +S + I+ S +AD S
Sbjct: 502 GSQDRTAKLWALSDLRLLG---------VCR--G-HRRGVWSVQFSPVDQILGSASADGS 549
Query: 291 VQFF 294
V+ +
Sbjct: 550 VRIW 553
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
+LR + GH VWS+ + P VD + S S D +VRIW S + ++C
Sbjct: 515 DLRLLGVCRGHRRGVWSVQFSP---VD---QILGSASADGSVRIW----SIQDFSCLKTF 564
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
E H +V + G L ++ D +W ECV TL+ H+++V ++
Sbjct: 565 EG-HDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTN--ECVRTLDAHQDKVWALHGGCR 621
Query: 130 GTLLATCGRDKSVWIW 145
L+ T D ++ +W
Sbjct: 622 DELMVTGSADSTITVW 637
Score = 98 (39.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 53/215 (24%), Positives = 90/215 (41%)
Query: 11 LREIQTLEGHTDRVWSLAWK-PTAGV--DGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
LR+ + R W P A + D + + A+ D T+++W+ N K
Sbjct: 87 LRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKG 146
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+H S L ++S D IW D+ CV LE H + V +++++
Sbjct: 147 SSGVVHLVEFHP---DISRLQLFSSSSDCAIRIW-DLRSS-RCVCVLESHYSPVTALAFS 201
Query: 128 ASGTLLATCGRDK--SVW------IWEVMPGNE-FECVSVLQGHAQDVKMVQWHPTMDVL 178
G L + GRDK SVW + +P E E V +L G A +M + ++
Sbjct: 202 PDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLV 261
Query: 179 FSCSYDNTIKVWWAEDTDSDNWHCV--QTISESNN 211
+ S ++VW DS + CV QT+ ++++
Sbjct: 262 TAGS-KGVLRVW-----DSSSSRCVFTQTLPDASS 290
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 267 HDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H R ++SV +S + I+ S +AD SV+ + S D LK + HD V +
Sbjct: 525 HRRGVWSVQFSPVDQILGSASADGSVRIW--SIQDF-------SCLKTFEGHDASVLKII 575
Query: 326 WSPGERRLLASASDDGMIKIWEL 348
+ +L++S SD G++K+W +
Sbjct: 576 FVSRGTQLVSSGSD-GLVKLWTI 597
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 235 (87.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 62/232 (26%), Positives = 108/232 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ +EGHT RV + W P+ G +C D++ R+W+ A + +E H
Sbjct: 316 VADIEGHTVRVARVMWHPSGRFLGT-----TCY-DRSWRLWDLEAQEEILH-----QEGH 364
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ V A+ G L T DA +W+ G C+ LEGH E+ ++++ +G +
Sbjct: 365 SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG--RCIMFLEGHLKEIYGINFSPNGYHI 422
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWA 192
AT D + +W++ + CV + H V V++ P + L + +YDNT K+W
Sbjct: 423 ATGSGDNTCKVWDL---RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW-- 477
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
W ++T++ GH + L ++ G + +CS D T K+W A+
Sbjct: 478 ---THPGWSPLKTLA----GHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 522
Score = 212 (79.7 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 14 IQTLEGHTDRVWSLAWKP--TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ TL GH V ++ + P T +D ASC+ D +V++W + + E
Sbjct: 266 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADI-----E 320
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT V W PSG+ L T +D + +W D+ E + EGH V ++++ G+
Sbjct: 321 GHTVRVARVMWHPSGRFLGTTCYDRSWRLW-DLEAQEE-ILHQEGHSMGVYDIAFHQDGS 378
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T G D +W++ G C+ L+GH +++ + + P + + S DNT KVW
Sbjct: 379 LAGTGGLDAFGRVWDLRTGR---CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW- 434
Query: 192 AEDTDSDNWHCVQTISESNN 211
D CV TI N
Sbjct: 435 ----DLRQRRCVYTIPAHQN 450
Score = 158 (60.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 49 KTVRIWEQSASSRFWN--CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG 106
+T ++ E S R N C + ++ R + C +SP+ K+LATA + +W
Sbjct: 207 RTSQMQELHKSLRSLNNFCSQIGDD---RPISYCHFSPNSKMLATACWSGLCKLWSVP-- 261
Query: 107 DYECVATLEGHENEVKSVSWNASGTL--------LATCGRDKSVWIWEVMPGNEFECVSV 158
D + TL GH V ++ ++ T+ LA+C D SV +W + + E V+
Sbjct: 262 DCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSL---DSDEPVAD 318
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
++GH V V WHP+ L + YD + ++W E + H GHS ++
Sbjct: 319 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE-AQEEILH--------QEGHSMGVY 369
Query: 219 ALSFNAKGDKLVSCSDDLTIKIW 241
++F+ G + D ++W
Sbjct: 370 DIAFHQDGSLAGTGGLDAFGRVW 392
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I LEGH ++ + + P G A+ SGD T ++W+ R C +
Sbjct: 398 RCIMFLEGHLKEIYGINFSPN-GYH-----IATGSGDNTCKVWDL----RQRRCVYTIPA 447
Query: 72 MHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V + P G L T ++D T IW G + + TL GHE +V + ++ G
Sbjct: 448 -HQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG--WSPLKTLAGHEGKVMGLDISSDG 504
Query: 131 TLLATCGRDKSVWIW 145
L+ATC D++ +W
Sbjct: 505 QLIATCSYDRTFKLW 519
Score = 140 (54.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 42/158 (26%), Positives = 70/158 (44%)
Query: 84 PSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVW 143
P LA+ + D + +W + D E VA +EGH V V W+ SG L T D+S
Sbjct: 291 PKDVNLASCAADGSVKLWS-LDSD-EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 348
Query: 144 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV 203
+W++ E + +GH+ V + +H + + D +VW D C+
Sbjct: 349 LWDLEAQEE---ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-----DLRTGRCI 400
Query: 204 QTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ GH I+ ++F+ G + + S D T K+W
Sbjct: 401 MFLE----GHLKEIYGINFSPNGYHIATGSGDNTCKVW 434
Score = 52 (23.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H + I+ +++S G IA+G+ D++ + + DL + + AH V V+
Sbjct: 406 HLKEIYGINFSPNGYHIATGSGDNTCKVW-----DL----RQRRCVYTIPAHQNLVTGVK 456
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ P L + + D KIW
Sbjct: 457 FEPIHGNFLLTGAYDNTAKIW 477
Score = 39 (18.8 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
LK H+ V + S + +L+A+ S D K+W
Sbjct: 485 LKTLAGHEGKVMGLDIS-SDGQLIATCSYDRTFKLW 519
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 235 (87.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 62/232 (26%), Positives = 108/232 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ +EGHT RV + W P+ G +C D++ R+W+ A + +E H
Sbjct: 331 VADIEGHTVRVARVMWHPSGRFLGT-----TCY-DRSWRLWDLEAQEEILH-----QEGH 379
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ V A+ G L T DA +W+ G C+ LEGH E+ ++++ +G +
Sbjct: 380 SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG--RCIMFLEGHLKEIYGINFSPNGYHI 437
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWA 192
AT D + +W++ + CV + H V V++ P + L + +YDNT K+W
Sbjct: 438 ATGSGDNTCKVWDL---RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW-- 492
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
W ++T++ GH + L ++ G + +CS D T K+W A+
Sbjct: 493 ---THPGWSPLKTLA----GHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 537
Score = 212 (79.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 14 IQTLEGHTDRVWSLAWKP--TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ TL GH V ++ + P T +D ASC+ D +V++W + + E
Sbjct: 281 LHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADI-----E 335
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT V W PSG+ L T +D + +W D+ E + EGH V ++++ G+
Sbjct: 336 GHTVRVARVMWHPSGRFLGTTCYDRSWRLW-DLEAQEE-ILHQEGHSMGVYDIAFHQDGS 393
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T G D +W++ G C+ L+GH +++ + + P + + S DNT KVW
Sbjct: 394 LAGTGGLDAFGRVWDLRTGR---CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW- 449
Query: 192 AEDTDSDNWHCVQTISESNN 211
D CV TI N
Sbjct: 450 ----DLRQRRCVYTIPAHQN 465
Score = 158 (60.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 49 KTVRIWEQSASSRFWN--CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG 106
+T ++ E S R N C + ++ R + C +SP+ K+LATA + +W
Sbjct: 222 RTSQMQELHKSLRSLNNFCSQIGDD---RPISYCHFSPNSKMLATACWSGLCKLWSVP-- 276
Query: 107 DYECVATLEGHENEVKSVSWNASGTL--------LATCGRDKSVWIWEVMPGNEFECVSV 158
D + TL GH V ++ ++ T+ LA+C D SV +W + + E V+
Sbjct: 277 DCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSL---DSDEPVAD 333
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
++GH V V WHP+ L + YD + ++W E + H GHS ++
Sbjct: 334 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE-AQEEILH--------QEGHSMGVY 384
Query: 219 ALSFNAKGDKLVSCSDDLTIKIW 241
++F+ G + D ++W
Sbjct: 385 DIAFHQDGSLAGTGGLDAFGRVW 407
Score = 143 (55.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I LEGH ++ + + P G A+ SGD T ++W+ R C +
Sbjct: 413 RCIMFLEGHLKEIYGINFSPN-GYH-----IATGSGDNTCKVWDL----RQRRCVYTIPA 462
Query: 72 MHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V + P G L T ++D T IW G + + TL GHE +V + ++ G
Sbjct: 463 -HQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG--WSPLKTLAGHEGKVMGLDISSDG 519
Query: 131 TLLATCGRDKSVWIW 145
L+ATC D++ +W
Sbjct: 520 QLIATCSYDRTFKLW 534
Score = 139 (54.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 41/153 (26%), Positives = 69/153 (45%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
LA+ + D + +W + D E VA +EGH V V W+ SG L T D+S +W++
Sbjct: 311 LASCAADGSVKLWS-LDSD-EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE 368
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
E + +GH+ V + +H + + D +VW D C+ +
Sbjct: 369 AQEE---ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-----DLRTGRCIMFLE- 419
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH I+ ++F+ G + + S D T K+W
Sbjct: 420 ---GHLKEIYGINFSPNGYHIATGSGDNTCKVW 449
Score = 52 (23.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H + I+ +++S G IA+G+ D++ + + DL + + AH V V+
Sbjct: 421 HLKEIYGINFSPNGYHIATGSGDNTCKVW-----DL----RQRRCVYTIPAHQNLVTGVK 471
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ P L + + D KIW
Sbjct: 472 FEPIHGNFLLTGAYDNTAKIW 492
Score = 39 (18.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
LK H+ V + S + +L+A+ S D K+W
Sbjct: 500 LKTLAGHEGKVMGLDIS-SDGQLIATCSYDRTFKLW 534
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 235 (87.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 62/232 (26%), Positives = 108/232 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ +EGHT RV + W P+ G +C D++ R+W+ A + +E H
Sbjct: 333 VADIEGHTVRVARVMWHPSGRFLGT-----TCY-DRSWRLWDLEAQEEILH-----QEGH 381
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ V A+ G L T DA +W+ G C+ LEGH E+ ++++ +G +
Sbjct: 382 SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG--RCIMFLEGHLKEIYGINFSPNGYHI 439
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWA 192
AT D + +W++ + CV + H V V++ P + L + +YDNT K+W
Sbjct: 440 ATGSGDNTCKVWDL---RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW-- 494
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
W ++T++ GH + L ++ G + +CS D T K+W A+
Sbjct: 495 ---THPGWSPLKTLA----GHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 539
Score = 212 (79.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 57/200 (28%), Positives = 91/200 (45%)
Query: 14 IQTLEGHTDRVWSLAWKP--TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ TL GH V ++ + P T +D ASC+ D +V++W + + E
Sbjct: 283 LHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADI-----E 337
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT V W PSG+ L T +D + +W D+ E + EGH V ++++ G+
Sbjct: 338 GHTVRVARVMWHPSGRFLGTTCYDRSWRLW-DLEAQEE-ILHQEGHSMGVYDIAFHQDGS 395
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T G D +W++ G C+ L+GH +++ + + P + + S DNT KVW
Sbjct: 396 LAGTGGLDAFGRVWDLRTGR---CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW- 451
Query: 192 AEDTDSDNWHCVQTISESNN 211
D CV TI N
Sbjct: 452 ----DLRQRRCVYTIPAHQN 467
Score = 158 (60.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 49 KTVRIWEQSASSRFWN--CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG 106
+T ++ E S R N C + ++ R + C +SP+ K+LATA + +W
Sbjct: 224 RTSQMQELHKSLRSLNNFCSQIGDD---RPISYCHFSPNSKMLATACWSGLCKLWSVP-- 278
Query: 107 DYECVATLEGHENEVKSVSWNASGTL--------LATCGRDKSVWIWEVMPGNEFECVSV 158
D + TL GH V ++ ++ T+ LA+C D SV +W + + E V+
Sbjct: 279 DCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSL---DSDEPVAD 335
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
++GH V V WHP+ L + YD + ++W E + H GHS ++
Sbjct: 336 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE-AQEEILH--------QEGHSMGVY 386
Query: 219 ALSFNAKGDKLVSCSDDLTIKIW 241
++F+ G + D ++W
Sbjct: 387 DIAFHQDGSLAGTGGLDAFGRVW 409
Score = 143 (55.4 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I LEGH ++ + + P G A+ SGD T ++W+ R C +
Sbjct: 415 RCIMFLEGHLKEIYGINFSPN-GYH-----IATGSGDNTCKVWDL----RQRRCVYTIPA 464
Query: 72 MHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V + P G L T ++D T IW G + + TL GHE +V + ++ G
Sbjct: 465 -HQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG--WSPLKTLAGHEGKVMGLDISSDG 521
Query: 131 TLLATCGRDKSVWIW 145
L+ATC D++ +W
Sbjct: 522 QLIATCSYDRTFKLW 536
Score = 139 (54.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 41/153 (26%), Positives = 69/153 (45%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
LA+ + D + +W + D E VA +EGH V V W+ SG L T D+S +W++
Sbjct: 313 LASCAADGSVKLWS-LDSD-EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLE 370
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
E + +GH+ V + +H + + D +VW D C+ +
Sbjct: 371 AQEE---ILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW-----DLRTGRCIMFLE- 421
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH I+ ++F+ G + + S D T K+W
Sbjct: 422 ---GHLKEIYGINFSPNGYHIATGSGDNTCKVW 451
Score = 52 (23.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H + I+ +++S G IA+G+ D++ + + DL + + AH V V+
Sbjct: 423 HLKEIYGINFSPNGYHIATGSGDNTCKVW-----DL----RQRRCVYTIPAHQNLVTGVK 473
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ P L + + D KIW
Sbjct: 474 FEPIHGNFLLTGAYDNTAKIW 494
Score = 39 (18.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
LK H+ V + S + +L+A+ S D K+W
Sbjct: 502 LKTLAGHEGKVMGLDIS-SDGQLIATCSYDRTFKLW 536
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 229 (85.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 70/259 (27%), Positives = 117/259 (45%)
Query: 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
G Y+ + +T+ GH + +AW + + S S DKT+++WE S K
Sbjct: 100 GAYDGKFEKTISGHKLGISDVAWSSDSRL------LVSGSDDKTLKVWELSTGKSLKTLK 153
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
H+ V C ++P L+ + SFD + IW+ G +C+ TL H + V +V +
Sbjct: 154 G-----HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG--KCLKTLPAHSDPVSAVHF 206
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDN 185
N G+L+ + D IW+ G +C+ L V V++ P + + + DN
Sbjct: 207 NRDGSLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 263
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGAD 244
T+K+W D C++T + N I+A +F+ G K +VS S+D + IW
Sbjct: 264 TLKLW-----DYSKGKCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNMVYIWNLQ 316
Query: 245 ITRM-QSGDGYASWRHLCT 262
+ Q G+ LCT
Sbjct: 317 SKEVVQKLQGHTD-TVLCT 334
Score = 220 (82.5 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 50/169 (29%), Positives = 89/169 (52%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT+ V + +SP+G+ LA++S D IW G +E T+ GH+ + V+W++ L
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSSDSRL 128
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
L + DK++ +WE+ G + L+GH+ V ++P +++ S S+D ++++W
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW-- 183
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D C++T+ HS + A+ FN G +VS S D +IW
Sbjct: 184 ---DVRTGKCLKTLP----AHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
Score = 212 (79.7 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 62/204 (30%), Positives = 98/204 (48%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY L+ TL GHT V ++ + P AS S DK ++IW + +F K
Sbjct: 61 NYTLKF--TLAGHTKAVSAVKFSPNG------EWLASSSADKLIKIWG-AYDGKFE--KT 109
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ H + AWS +LL + S D T +WE G + + TL+GH N V ++N
Sbjct: 110 I--SGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTG--KSLKTLKGHSNYVFCCNFN 165
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
L+ + D+SV IW+V G +C+ L H+ V V ++ ++ S SYD
Sbjct: 166 PQSNLIVSGSFDESVRIWDVRTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 222
Query: 188 KVWWAEDTDSDNWHCVQTISESNN 211
++W DT S C++T+ + +N
Sbjct: 223 RIW---DTASGQ--CLKTLIDDDN 241
Score = 181 (68.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 58/187 (31%), Positives = 89/187 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++ + DG + S S D RIW+ +AS + C L +
Sbjct: 191 LKTLPAHSDPVSAVHFNR----DG--SLIVSSSYDGLCRIWD-TASGQ---CLKTLIDDD 240
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + A+ D T +W+ G +C+ T GH+NE + N S G
Sbjct: 241 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGG 298
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIK 188
+ + D V+IW + E V LQGH V HPT +++ S + +N TIK
Sbjct: 299 KWIVSGSEDNMVYIWNLQSK---EVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIK 355
Query: 189 VWWAEDT 195
+W DT
Sbjct: 356 LW-KSDT 361
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/135 (31%), Positives = 67/135 (49%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
+Y TL GH V +V ++ +G LA+ DK + IW G +FE + GH +
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDG-KFE--KTISGHKLGI 117
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
V W +L S S D T+KVW S ++T+ GHS+ ++ +FN +
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGKS-----LKTLK----GHSNYVFCCNFNPQS 168
Query: 227 DKLVSCSDDLTIKIW 241
+ +VS S D +++IW
Sbjct: 169 NLIVSGSFDESVRIW 183
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 50/210 (23%), Positives = 95/210 (45%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ S S D++VRIW+ R C L H+ V + ++ G L+ ++S+D I
Sbjct: 170 LIVSGSFDESVRIWDV----RTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 101 WEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
W+ G +C+ TL +N V V ++ +G + D ++ +W+ G +C+
Sbjct: 225 WDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTY 279
Query: 160 QGHAQDVKMV--QWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
GH + + + T + S S DN + +W + + VQ + GH+ T
Sbjct: 280 TGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKE-----VVQKLQ----GHTDT 330
Query: 217 IWALSFNAKGDKLVSCS--DDLTIKIWGAD 244
+ + + + + S + +D TIK+W +D
Sbjct: 331 VLCTACHPTENIIASAALENDKTIKLWKSD 360
Score = 51 (23.0 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGY 254
D C++T + N I+A +F+ G K +VS S+D + IW +QS +
Sbjct: 269 DYSKGKCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNMVYIWN-----LQSKEVV 321
Query: 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289
+ G+ D + + E IIAS A ++
Sbjct: 322 QK------LQGHTDTVLCTACHPTENIIASAALEN 350
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 237 (88.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 69/236 (29%), Positives = 107/236 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIW---EQSASSRFWNCKA--VLEEMH 73
GH+ V ++ P G + S D T++ W + +AS K H
Sbjct: 432 GHSAAVTAVGL-PNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAH 490
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ + + + SP+ + ATAS+D T IW G+ E ATL H+ + VS+ LL
Sbjct: 491 EKDINALSVSPNDSIFATASYDKTCKIWNLENGELE--ATLANHKRGLWDVSFCQYDKLL 548
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193
AT DK+V IW + + F + L+GH V+ + L SC D IK+W
Sbjct: 549 ATSSGDKTVKIWSL---DTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIW--- 602
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
D + C++T+ +GH++ +WALS GD +VS D + W D T +
Sbjct: 603 --DCSSGECLKTL----DGHNNRLWALSTMNDGDMIVSADADGVFQFW-KDCTEQE 651
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 43/148 (29%), Positives = 67/148 (45%)
Query: 8 NYELREIQ-TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
N E E++ TL H +W +++ D + A+ SGDKTV+IW S K
Sbjct: 519 NLENGELEATLANHKRGLWDVSF---CQYD---KLLATSSGDKTVKIWSLDTFSVM---K 569
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
+ E HT V+ C++ K L + D IW+ G EC+ TL+GH N + ++S
Sbjct: 570 TL--EGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSG--ECLKTLDGHNNRLWALST 625
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFE 154
G ++ + D W+ E E
Sbjct: 626 MNDGDMIVSADADGVFQFWKDCTEQEIE 653
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 59/249 (23%), Positives = 112/249 (44%)
Query: 111 VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN-EFECVSVLQGHAQDVKMV 169
V EGHE+ + S+ G +AT +D + +W + +F+ + GH+ V V
Sbjct: 381 VEIYEGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAV 440
Query: 170 QWHPTM------DVLFSCSYDNTIKVWWA-EDTDSDNWHCVQTISESNNGHSSTIWALSF 222
P + + L + S D TIK W + T S + ++ + + H I ALS
Sbjct: 441 GL-PNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSV 499
Query: 223 NAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGI 281
+ + S D T KIW +++G+ A T++ H R ++ V + + + +
Sbjct: 500 SPNDSIFATASYDKTCKIWN-----LENGELEA------TLAN-HKRGLWDVSFCQYDKL 547
Query: 282 IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG 341
+A+ + D +V+ + S D ++K + H V + +++L+ S DG
Sbjct: 548 LATSSGDKTVKIW--SLDTF-------SVMKTLEGHTNAVQRCSFINKQKQLI-SCGADG 597
Query: 342 MIKIWELAN 350
+IKIW+ ++
Sbjct: 598 LIKIWDCSS 606
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 52/209 (24%), Positives = 92/209 (44%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWE--DVGGDYECVATLEGHENEVKSVSW-N 127
E H + S + G +ATAS D T +W + ++ A GH V +V N
Sbjct: 385 EGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPN 444
Query: 128 --ASG--TLLATCGRDKSVWIWEVMP----GNEFECVSVLQ----GHAQDVKMVQWHPTM 175
+ G L T D ++ W ++P + + + V + H +D+ + P
Sbjct: 445 IVSKGYPEFLLTASNDLTIKKW-IIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPND 503
Query: 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD- 234
+ + SYD T K+W + +N T++ G +W +SF + DKL++ S
Sbjct: 504 SIFATASYDKTCKIW-----NLENGELEATLANHKRG----LWDVSF-CQYDKLLATSSG 553
Query: 235 DLTIKIWGAD-ITRMQSGDGYASWRHLCT 262
D T+KIW D + M++ +G+ + C+
Sbjct: 554 DKTVKIWSLDTFSVMKTLEGHTNAVQRCS 582
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 229 (85.7 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 66/203 (32%), Positives = 98/203 (48%)
Query: 9 YELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV 68
Y+L I T+EGHT + ++ + P G + S DKTV+IW S S C+
Sbjct: 69 YKL--ISTIEGHTKSISAVKFSPCGKFLGTS------SADKTVKIWNMSDLS----CERT 116
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
L H V AWS K + TAS D T I+E + TL+GH N V ++N
Sbjct: 117 LTG-HKLGVNDFAWSADSKSIVTASDDKTLKIYEVP--TVKMAKTLKGHTNYVFCCNFNP 173
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188
+L+ + D+SV IW+V G CV L H+ V V ++ ++ S SYD ++
Sbjct: 174 QSSLVVSGSFDESVRIWDVRTGM---CVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVR 230
Query: 189 VWWAEDTDSDNWHCVQTISESNN 211
+W D+ N CV+T+ + N
Sbjct: 231 IW-----DTANGQCVKTLVDDEN 248
Score = 224 (83.9 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
E HT+++ + +SP GK L T+S D T IW D C TL GH+ V +W+A
Sbjct: 76 EGHTKSISAVKFSPCGKFLGTSSADKTVKIWNM--SDLSCERTLTGHKLGVNDFAWSADS 133
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ T DK++ I+EV P + L+GH V ++P ++ S S+D ++++W
Sbjct: 134 KSIVTASDDKTLKIYEV-P--TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D CV+T+ HS + A+SFN G + S S D ++IW
Sbjct: 191 -----DVRTGMCVKTLP----AHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Score = 212 (79.7 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 72/245 (29%), Positives = 112/245 (45%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+TL GH V AW D + V AS DKT++I+E K HT
Sbjct: 115 RTLTGHKLGVNDFAWS----ADSKSIVTAS--DDKTLKIYEVPTVKMAKTLKG-----HT 163
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
V C ++P L+ + SFD + IW+ G CV TL H + V +VS+N G+L+
Sbjct: 164 NYVFCCNFNPQSSLVVSGSFDESVRIWDVRTG--MCVKTLPAHSDPVSAVSFNRDGSLIT 221
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193
+ D V IW+ G +CV L V V++ P + S + DNT+K+W
Sbjct: 222 SGSYDGLVRIWDTANG---QCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLW--- 275
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWAL--SFNAKGDK-LVSCSDDLTIKIWGADITRM-Q 249
D +T+ + GH + + + +F+ G K ++S S+D I +W + Q
Sbjct: 276 DFGKG-----KTLKQYQ-GHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQ 329
Query: 250 SGDGY 254
S +G+
Sbjct: 330 SLEGH 334
Score = 158 (60.7 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++TL H+D V ++++ DG + S S D VRIW+ +A+ + C L +
Sbjct: 198 VKTLPAHSDPVSAVSFNR----DG--SLITSGSYDGLVRIWD-TANGQ---CVKTLVDDE 247
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + +++ D T +W+ G + + +GHEN + N S G
Sbjct: 248 NPPVAFVKFSPNGKYILSSNLDNTLKLWDF--GKGKTLKQYQGHENNKYCIFANFSVTGG 305
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIK 188
+ + D +++W + E V L+GH Q V HP +++ S + DNTI+
Sbjct: 306 KWIISGSEDCKIYVWNLQTK---EVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIR 362
Query: 189 VW 190
+W
Sbjct: 363 IW 364
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 105 GGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164
G Y+ ++T+EGH + +V ++ G L T DK+V IW + ++ C L GH
Sbjct: 66 GAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNM---SDLSCERTLTGHKL 122
Query: 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224
V W + + S D T+K++ ++++ GH++ ++ +FN
Sbjct: 123 GVNDFAWSADSKSIVTASDDKTLKIYEVPTVK---------MAKTLKGHTNYVFCCNFNP 173
Query: 225 KGDKLVSCSDDLTIKIW 241
+ +VS S D +++IW
Sbjct: 174 QSSLVVSGSFDESVRIW 190
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 55/225 (24%), Positives = 103/225 (45%)
Query: 148 MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 207
+PG ++ +S ++GH + + V++ P L + S D T+K+W D C +T++
Sbjct: 64 IPGAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLS-----CERTLT 118
Query: 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM-QSGDGYASWRHLCT---- 262
GH + +++A +V+ SDD T+KI+ +M ++ G+ ++ C
Sbjct: 119 ----GHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQ 174
Query: 263 ----ISGYHDRTIFSVHWS-REGIIASG--AADDSVQFFVESKD-DLIDGPSYKMLLK-- 312
+SG D ++ W R G+ A D V ++D LI SY L++
Sbjct: 175 SSLVVSGSFDESVRI--WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Query: 313 --------KEKAHDMD--VNSVQWSPGERRLLASASDDGMIKIWE 347
K D + V V++SP + +L+S D+ +K+W+
Sbjct: 233 DTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDN-TLKLWD 276
Score = 134 (52.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
S S D++VRIW+ R C L H+ V + +++ G L+ + S+D IW+
Sbjct: 180 SGSFDESVRIWDV----RTGMCVKTLPA-HSDPVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Query: 104 VGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH 162
G +CV TL EN V V ++ +G + + D ++ +W+ G + + QGH
Sbjct: 235 ANG--QCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKG---KTLKQYQGH 289
Query: 163 AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT--ISESNNGHSSTIWAL 220
+ + + FS + I + +ED W+ +QT + +S GH+ + A
Sbjct: 290 ENNKYCIFAN------FSVTGGKWI-ISGSEDCKIYVWN-LQTKEVVQSLEGHTQAVIAS 341
Query: 221 SFNAKGDKLVS--CSDDLTIKIWGAD 244
+ + + S D TI+IW +D
Sbjct: 342 DCHPMQNMIASGALEPDNTIRIWRSD 367
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 231 (86.4 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 75/267 (28%), Positives = 126/267 (47%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D GD L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDISAGPKEGKVVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S S + H++
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHSVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 150 (57.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 50/195 (25%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ +V + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTTSKPSHSV--DAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSD 198
N +++W AE+ +D
Sbjct: 396 NIMQIWQMAENIYND 410
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 102/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ SA + + KA+ H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDISAGPKEGKVVDAKAIFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + +++ H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 132 (51.5 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 54/236 (22%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + + H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 236 (88.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 73/247 (29%), Positives = 114/247 (46%)
Query: 4 LDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVR---IWEQSASS 60
++D Y+ I GHT V ++A P V+G AS S D+T++ + Q S
Sbjct: 395 IEDNVYKC--IHVFTGHTASVTAVALGPL-DVNGYPTFLASSSQDRTLKRFNLGSQLNKS 451
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120
F N + H R V + S G+++A+AS D T +W+ G E V L GH
Sbjct: 452 DFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTG--EVVGVLRGHRRG 509
Query: 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV-KMVQWHPTMDVLF 179
V + S+N LA+ D+++ IW V + +CV L+GH + K++ V+
Sbjct: 510 VWACSFNPFSRQLASGSGDRTIRIWNV---DTQQCVQTLEGHTGAILKLIYISQGTQVV- 565
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239
S + D +KVW + CV T+ + H +WAL+ G LVS D +
Sbjct: 566 SAAADGLVKVW-----SLSSGECVATL----DNHEDRVWALASRFDGSLLVSGGADAVVS 616
Query: 240 IWGADIT 246
+W D+T
Sbjct: 617 VW-KDVT 622
Score = 187 (70.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 72/254 (28%), Positives = 114/254 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I+ L G D V AW G D +A CS + + + + F VLE H
Sbjct: 316 IKKLNGSFDEVIDCAW---IGDDHLAV----CSNTEFIDVISTDGTQVF----GVLEG-H 363
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGD-YECVATLEGHENEVKSVSW----- 126
T V + S G LAT + D T +W ++ + Y+C+ GH V +V+
Sbjct: 364 TDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDV 423
Query: 127 NASGTLLATCGRDKSVWIWEV---MPGNEFE--CVSVLQGHAQDVKMVQWHPTMDVLFSC 181
N T LA+ +D+++ + + + ++F V ++ H +DV +Q ++ S
Sbjct: 424 NGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASA 483
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D TIK+W DS V + GH +WA SFN +L S S D TI+IW
Sbjct: 484 SQDKTIKLW-----DSSTGEVVGVL----RGHRRGVWACSFNPFSRQLASGSGDRTIRIW 534
Query: 242 GADITR-MQSGDGY 254
D + +Q+ +G+
Sbjct: 535 NVDTQQCVQTLEGH 548
Score = 143 (55.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 81/315 (25%), Positives = 126/315 (40%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAW---SPSGKLLATASFDATTCI 100
S S DKTV++W S + H+ V + W P K+L TA
Sbjct: 206 SGSRDKTVQVWNIKKRSAV----RTIPVFHS--VEAIGWVNGQPEEKILYTAGEGNLILA 259
Query: 101 WEDVGGDY--ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSV 158
W+ G V T N + V + TLL+ D S+ + + +PG F +
Sbjct: 260 WDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHS-DLSLLLRKRVPGEGFITIKK 318
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
L G +V W D L CS I V + T V + E GH+ +
Sbjct: 319 LNGSFDEVIDCAWIGD-DHLAVCSNTEFIDVISTDGTQ------VFGVLE---GHTDIVL 368
Query: 219 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR 278
L + G L + + D T+++W +I D H+ T G H ++ +V
Sbjct: 369 TLDSSEDGVWLATGAKDNTVRLWNLNIE-----DNVYKCIHVFT--G-HTASVTAVALGP 420
Query: 279 EGI------IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR 332
+ +AS + D +++ F L + KAHD DVN++Q S + R
Sbjct: 421 LDVNGYPTFLASSSQDRTLKRF-NLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSK-DGR 478
Query: 333 LLASASDDGMIKIWE 347
++ASAS D IK+W+
Sbjct: 479 IIASASQDKTIKLWD 493
Score = 128 (50.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 55/222 (24%), Positives = 106/222 (47%)
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA C + + +V+ + + VL+GH V + L + + DNT+++W
Sbjct: 337 LAVCSNTEFI---DVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL 393
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWA-----LSFNAKGDKLVSCSDDLTIKIWGADITR 247
D+ + C+ + GH++++ A L N L S S D T+K + ++
Sbjct: 394 NIEDNV-YKCIHVFT----GHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLG-SQ 447
Query: 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPS 306
+ D +++ R + TI HDR + ++ S++G IIAS + D +++ + S +++
Sbjct: 448 LNKSD-FSN-RAVWTIKA-HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVG--- 501
Query: 307 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+L+ H V + ++P R+L AS S D I+IW +
Sbjct: 502 ---VLR---GHRRGVWACSFNPFSRQL-ASGSGDRTIRIWNV 536
Score = 126 (49.4 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 37/144 (25%), Positives = 66/144 (45%)
Query: 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDY 108
+ + I+E + R + KA H V + P+ LLAT + +W D+ G Y
Sbjct: 83 RLLTIYEIPSGRRIKSMKA-----HETPVITMTIDPTNTLLATGGAEGLVKVW-DIAGAY 136
Query: 109 ECVATLEGHENEVKSVSWNA-SGTLLATCGRDKS-VWIWEVMPGNEFECVSVLQGHAQDV 166
+ GH + ++ + T + G D S V +W++ N ++V +GH+ +
Sbjct: 137 -VTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDL---NSSRSMAVFEGHSSVI 192
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVW 190
+ + + PT L S S D T++VW
Sbjct: 193 RGLTFEPTGSFLLSGSRDKTVQVW 216
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 46/161 (28%), Positives = 78/161 (48%)
Query: 83 SPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSV 142
S S KL+A T I+E G + +++ HE V +++ + + TLLAT G + V
Sbjct: 71 SDSKKLIAAFRSRLLT-IYEIPSG--RRIKSMKAHETPVITMTIDPTNTLLATGGAEGLV 127
Query: 143 WIWEVMPGNEFECVSVLQGHAQDVKMVQW--HPTMDVLFSCSYDNTIKVWWAEDTDSDNW 200
+W++ + S +GH + + + H VL S + D+ +++W D +S
Sbjct: 128 KVWDI--AGAYVTHS-FRGHGGVISALCFGKHQNTWVLASGADDSRVRLW---DLNSSR- 180
Query: 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ E GHSS I L+F G L+S S D T+++W
Sbjct: 181 --SMAVFE---GHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Score = 114 (45.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 35/152 (23%), Positives = 70/152 (46%)
Query: 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 147
+LA+ + D+ +W D+ +A EGH + ++ +++ +G+ L + RDK+V +W +
Sbjct: 161 VLASGADDSRVRLW-DLNSS-RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNI 218
Query: 148 MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW-WAEDTDSDNWHCVQTI 206
+ + V + + V P +L++ N I W W + D T
Sbjct: 219 KKRSAVRTIPVFHS-VEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPG-VDTTH 276
Query: 207 SESNNGHSSTIWALSFNAKGDKLVSCSDDLTI 238
SE+N + I + F+ + L+S DL++
Sbjct: 277 SETN----AIIQVVPFSE--NTLLSVHSDLSL 302
Score = 65 (27.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 33/138 (23%), Positives = 62/138 (44%)
Query: 223 NAKGDKLVSCS---DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE 279
N D+++ C+ DD + + S DG + + G+ D + ++ S +
Sbjct: 320 NGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQVFG---VLEGHTD-IVLTLDSSED 375
Query: 280 GI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP----GERRLL 334
G+ +A+GA D++V+ + + +D + YK + H V +V P G L
Sbjct: 376 GVWLATGAKDNTVRLWNLNIEDNV----YKCI-HVFTGHTASVTAVALGPLDVNGYPTFL 430
Query: 335 ASASDDGMIKIWELANTL 352
AS+S D +K + L + L
Sbjct: 431 ASSSQDRTLKRFNLGSQL 448
Score = 50 (22.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 334 LASASDDGMIKIWELAN 350
+ SA+ DG++K+W L++
Sbjct: 564 VVSAAADGLVKVWSLSS 580
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 234 (87.4 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 85/274 (31%), Positives = 128/274 (46%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
VRS A+SP GK LAT D IW D+ L GHE E+ S+ ++ G L +
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIW-DIA-QKRVYRLLTGHEQEIYSLDFSKDGKTLVSG 406
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQD-VKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
D++V +W+V G + +L H D V V + P + + S D I++W T
Sbjct: 407 SGDRTVCLWDVEAGEQ---KLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIW----T 457
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA 255
S T+ E +GH ++++++F+ G LVS S D TIK+W + Y
Sbjct: 458 SSG------TLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYK 511
Query: 256 SWRHLC--TISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLK 312
+C T +G+ D I SV S +G I SG+ D ++QF+ D P ++ L+
Sbjct: 512 EGG-ICKQTFTGHKD-FILSVTVSPDGKWIISGSKDRTIQFWSP------DSPHSQLTLQ 563
Query: 313 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H+ V SV SP A+ S D +IW
Sbjct: 564 ---GHNNSVISVAVSPNGH-CFATGSGDLRARIW 593
Score = 193 (73.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 70/250 (28%), Positives = 110/250 (44%)
Query: 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD 107
D+ +RIW+ A R + L H + + S +S GK L + S D T C+W+ G+
Sbjct: 367 DQQIRIWD-IAQKRVYR----LLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGE 421
Query: 108 YECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
+ + H ++ V +V ++ G +A DK + IW G V L GH + V
Sbjct: 422 QKLIL----HTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGT---LVEQLHGHEESV 473
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-------DNWHCVQTISESNNGHSSTIWA 219
V + P L S S DNTIK+W + + + C QT + GH I +
Sbjct: 474 YSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFT----GHKDFILS 529
Query: 220 LSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE 279
++ + G ++S S D TI+ W D Q T+ G H+ ++ SV S
Sbjct: 530 VTVSPDGKWIISGSKDRTIQFWSPDSPHSQ-----------LTLQG-HNNSVISVAVSPN 577
Query: 280 G-IIASGAAD 288
G A+G+ D
Sbjct: 578 GHCFATGSGD 587
Score = 190 (71.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 69/240 (28%), Positives = 104/240 (43%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R + L GH ++SL + DG V S SGD+TV +W+ A + K +L
Sbjct: 379 RVYRLLTGHEQEIYSLDFSK----DGKTLV--SGSGDRTVCLWDVEAGEQ----KLIL-- 426
Query: 72 MHTRT-VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
HT V + +SP G+ +A S D IW G V L GHE V SV+++ G
Sbjct: 427 -HTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSG---TLVEQLHGHEESVYSVAFSPDG 482
Query: 131 TLLATCGRDKSVWIWE------VMPGNEFE---CVSVLQGHAQDVKMVQWHPTMDVLFSC 181
L + D ++ +WE V P E C GH + V P + S
Sbjct: 483 KYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISG 542
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D TI+ W D+ H T+ GH++++ +++ + G + S DL +IW
Sbjct: 543 SKDRTIQFW-----SPDSPHSQLTLQ----GHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Score = 143 (55.4 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 56/193 (29%), Positives = 89/193 (46%)
Query: 15 QTLEGHTDR-VWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
Q L HTD V ++ + P DG A+ S DK +RIW S + ++E++H
Sbjct: 422 QKLILHTDDGVTTVMFSP----DG--QFIAAGSLDKVIRIWTSSGT--------LVEQLH 467
Query: 74 --TRTVRSCAWSPSGKLLATASFDATTCIWE-----DVGGD-YE----CVATLEGHENEV 121
+V S A+SP GK L + S D T +WE +V Y+ C T GH++ +
Sbjct: 468 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFI 527
Query: 122 KSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181
SV+ + G + + +D+++ W P + ++ LQGH V V P +
Sbjct: 528 LSVTVSPDGKWIISGSKDRTIQFWS--PDSPHSQLT-LQGHNNSVISVAVSPNGHCFATG 584
Query: 182 SYDNTIKVWWAED 194
S D ++W ED
Sbjct: 585 SGDLRARIWSYED 597
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 229 (85.7 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 60/181 (33%), Positives = 94/181 (51%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E+ TLEGH + V+++A+ G D VA + S DKT ++W F+ +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYG-DKVA----TGSFDKTCKLWSAETGKCFYTFRG----- 175
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT + A++P L+AT S D T +W+ G E V+TL GH E+ S+ +N +G
Sbjct: 176 HTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESG--EEVSTLAGHFAEIISLCFNTTGDR 233
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
L T D + +W+V G + V VL GH ++ VQ++ ++ + S D + KVW A
Sbjct: 234 LVTGSFDHTAILWDVPSGRK---VHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDA 290
Query: 193 E 193
E
Sbjct: 291 E 291
Score = 221 (82.9 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 53/160 (33%), Positives = 89/160 (55%)
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
W S L+ATAS D + +W+ GG +C+ATL GH +EV V +N +G L+AT D +
Sbjct: 271 WDCS--LIATASLDKSCKVWDAEGG--QCLATLLGHNDEVLDVCFNYTGQLIATASADGT 326
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
++ + F+C+ L+GH ++ V ++ + + S D T +VW + T +
Sbjct: 327 SRVFST---DTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVK-TGA---- 378
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
C+Q + GHS I++ +FN +GD +++ S D T +IW
Sbjct: 379 CLQVLE----GHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 210 (79.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 52/172 (30%), Positives = 87/172 (50%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT + A++P L+AT S D T +W+ G E V+TL GH E+ S+ +N +G
Sbjct: 176 HTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESG--EEVSTLAGHFAEIISLCFNTTGDR 233
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
L T D + +W+V G + V VL GH ++ VQ++ ++ + S D + KVW
Sbjct: 234 LVTGSFDHTAILWDVPSGRK---VHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVW-- 288
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
D++ C+ T+ GH+ + + FN G + + S D T +++ D
Sbjct: 289 ---DAEGGQCLATLL----GHNDEVLDVCFNYTGQLIATASADGTSRVFSTD 333
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 60/204 (29%), Positives = 97/204 (47%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS-PSGKLLATASFDATTCI 100
F + S D+T +IW+ ++ E H V + A++ P G +AT SFD T +
Sbjct: 107 FITGSYDRTCKIWDTASGEELHTL-----EGHRNVVYAIAFNNPYGDKVATGSFDKTCKL 161
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W G +C T GH E+ +++N TL+AT D + +W+V G E VS L
Sbjct: 162 WSAETG--KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEE---VSTLA 216
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
GH ++ + ++ T D L + S+D+T +W D + V +S GH I +
Sbjct: 217 GHFAEIISLCFNTTGDRLVTGSFDHTAILW-----DVPSGRKVHVLS----GHRGEISCV 267
Query: 221 SFNAKGDKLVSCSDDLTIKIWGAD 244
FN + + S D + K+W A+
Sbjct: 268 QFNWDCSLIATASLDKSCKVWDAE 291
Score = 206 (77.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 56/187 (29%), Positives = 94/187 (50%)
Query: 56 QSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE 115
Q +F+ +A+ + H + + A++ SG T S+D T IW+ G E + TLE
Sbjct: 76 QKDERKFYLFRAL--QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASG--EELHTLE 131
Query: 116 GHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
GH N V ++++N G +AT DK+ +W G +C +GH ++ + ++P
Sbjct: 132 GHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETG---KCFYTFRGHTAEIVCLAFNPQ 188
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
++ + S D T K+W E + V T++ GH + I +L FN GD+LV+ S
Sbjct: 189 STLVATGSMDTTAKLWDVESGEE-----VSTLA----GHFAEIISLCFNTTGDRLVTGSF 239
Query: 235 DLTIKIW 241
D T +W
Sbjct: 240 DHTAILW 246
Score = 201 (75.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 49/179 (27%), Positives = 89/179 (49%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R++ L GH + + + + A+ S DK+ ++W+ C A L
Sbjct: 252 RKVHVLSGHRGEISCVQFNWDCSL------IATASLDKSCKVWDAEGGQ----CLATLLG 301
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H V ++ +G+L+ATAS D T+ ++ ++C+ LEGH+ E+ V +NA G+
Sbjct: 302 -HNDEVLDVCFNYTGQLIATASADGTSRVFST--DTFQCLCQLEGHKGEISKVCFNAQGS 358
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ T DK+ +W V G C+ VL+GH+ ++ ++ D + + S DNT ++W
Sbjct: 359 RVLTASVDKTSRVWCVKTG---ACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 228 (85.3 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 75/267 (28%), Positives = 126/267 (47%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDISAGPKEGKVVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
+V GH+ V+ V WH + LF S + D + +W DT S+ S S + H++
Sbjct: 220 AVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHSVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 150 (57.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 50/195 (25%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ +V + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTTSKPSHSV--DAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSD 198
N +++W AE+ +D
Sbjct: 396 NIMQIWQMAENIYND 410
Score = 150 (57.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 60/238 (25%), Positives = 102/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ SA + + KAV H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDISAGPKEGKVVDAKAVFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + +++ H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 54/236 (22%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + + H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 58/256 (22%), Positives = 107/256 (41%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 110 VSGKIETEIKIN-HEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSP 168
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+ + L S S D+T+ +W + V GHS
Sbjct: 169 DLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGK--VVDAKAVFTGHS 226
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + ++++ + L S +DD + IW + S ++ H ++ S
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPSHSVDAHTAEVN------CLS 279
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ V WSP +
Sbjct: 280 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVHWSPHNETI 331
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 332 LASSGTDRRLNVWDLS 347
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 215 (80.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 70/258 (27%), Positives = 121/258 (46%)
Query: 27 LAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG 86
++W P +G V S SG+ T +W + +N + +L+ H VRS WS +
Sbjct: 131 VSWTP----EGRRLVTGSSSGEFT--LW----NGLTFNFETILQA-HDSAVRSIIWSHNE 179
Query: 87 KLLATASFDATTCIWEDVGGDYECVATLEGHE-NEVKSVSWNASGTLLATCGRDKSVWIW 145
+ + W+ + V + HE ++++ +S++ + LA+C DK + IW
Sbjct: 180 DWMVSGDDSGNIKYWQP---NMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIW 236
Query: 146 EVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT 205
+ E + L GH DVK V WHP ++ S DN IK+W A+ S N + T
Sbjct: 237 DFARCTED---NQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKS--SQN---ITT 288
Query: 206 ISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA-DITRMQSGDGYASWRHLCTIS 264
+ +GH ST+ + +N G+ +VS S D +K++ + MQ+ G+ +
Sbjct: 289 L----HGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALH 344
Query: 265 GYHDRTIFSVHWSREGII 282
YH+ +F V ++G I
Sbjct: 345 PYHE-DLF-VSGDKDGKI 360
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 74/295 (25%), Positives = 127/295 (43%)
Query: 79 SC-AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG 137
+C +W+P G+ L T S +W + ++E + L+ H++ V+S+ W+ + + +
Sbjct: 129 NCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETI--LQAHDSAVRSIIWSHNEDWMVSGD 186
Query: 138 RDKSVWIWEVMPGNEFECVSVLQGHAQD-VKMVQWHPTMDVLFSCSYDNTIKVW-WAEDT 195
++ W+ N V + + H Q ++ + + PT L SC+ D IK+W +A T
Sbjct: 187 DSGNIKYWQPNMNN----VKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCT 242
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA----DITRMQSG 251
+ DN Q + GH + +S++ + +VS D IKIW A +IT +
Sbjct: 243 E-DN----QLV-----GHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGH 292
Query: 252 DGYAS---WRHLCT--ISGYHDRT--IFSVHWSREGIIASGAADDSVQFFVES-KDDLI- 302
S W +S D+ +F + +E G + + +DL
Sbjct: 293 KSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFV 352
Query: 303 ----DGPS-YKMLLKKE------KAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
DG Y ++ E AHD DV S+ W P +LAS S+D K W
Sbjct: 353 SGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHP-IGHILASGSNDHTTKFW 406
Score = 174 (66.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 43/170 (25%), Positives = 78/170 (45%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V+ +W P L+ + D IW+ + + TL GH++ V V WN +G
Sbjct: 250 HGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSS--QNITTLHGHKSTVSKVEWNQNGNW 307
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWW 191
+ + D+ + ++++ E + +GH ++V + HP + LF S D I W
Sbjct: 308 IVSASSDQLLKVFDIRTMKEMQ---TFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWI 364
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ + +E ++ H + +W+LS++ G L S S+D T K W
Sbjct: 365 VGNPEPQ--------AEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFW 406
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/179 (26%), Positives = 73/179 (40%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E L GH V ++W P + S D ++IW+ +S
Sbjct: 243 EDNQLVGHGWDVKCVSWHPQKSL------IVSGGKDNNIKIWDAKSSQNITTLHG----- 291
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H TV W+ +G + +AS D ++ D+ E + T +GH EV +++ +
Sbjct: 292 HKSTVSKVEWNQNGNWIVSASSDQLLKVF-DIRTMKE-MQTFKGHGKEVTALALHPYHED 349
Query: 133 LATCG-RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L G +D + W V GN + H DV + WHP +L S S D+T K W
Sbjct: 350 LFVSGDKDGKILYWIV--GNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFW 406
Score = 58 (25.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 263 ISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-----VESKDDLIDGPSY-KMLLKKEK 315
I HD ++S+ W G I+ASG+ D + +F+ ++ D + P+ K + +E
Sbjct: 374 IHSAHDADVWSLSWHPIGHILASGSNDHTTKFWSRNRPADTMKDKYNNPNASKDIENEED 433
Query: 316 AHDMD 320
A D +
Sbjct: 434 ADDQE 438
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/220 (26%), Positives = 111/220 (50%)
Query: 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 152
S D T +W+ G +EC+ T+ GH++ V SV+ +G + + RDK++ +WEV G
Sbjct: 1 SADMTIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY- 57
Query: 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-----DNWHCVQTIS 207
CV GH + V+MV+ + ++ SCS D T++VW + ++ H V+ IS
Sbjct: 58 --CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 115
Query: 208 ---ESNN-----------GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG 253
ES+ GH + + + F++ G ++SC+DD T+++W
Sbjct: 116 WAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD----------- 164
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQ 292
Y + R + T++ H+ + S+ + + + +G+ D +V+
Sbjct: 165 YKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVK 203
Score = 199 (75.1 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 65/221 (29%), Positives = 102/221 (46%)
Query: 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG 105
S D T+++W+ + C + H V S A P+G + +AS D T +WE
Sbjct: 1 SADMTIKLWDFQG----FECIRTMHG-HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 55
Query: 106 GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV--------MPGNEF--EC 155
G Y CV T GH V+ V N GTL+A+C D++V +W V + +E EC
Sbjct: 56 G-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 113
Query: 156 VS---------VLQ------GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW 200
+S + + GH V+ V +H + SC+ D T++VW D N
Sbjct: 114 ISWAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-----DYKNK 168
Query: 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
C++T+ N H + +L F+ +V+ S D T+K+W
Sbjct: 169 RCMKTL----NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I+T+ GH V S+A P D + S S DKT+++WE C H
Sbjct: 17 IRTMHGHDHNVSSVAIMPNG--DHIV----SASRDKTIKMWEVQTGY----CVKTFTG-H 65
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
VR + G L+A+ S D T +W V EC A L HE+ V+ +SW
Sbjct: 66 REWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISW 116
Score = 112 (44.5 bits), Expect = 0.00034, P = 0.00034
Identities = 41/179 (22%), Positives = 80/179 (44%)
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D TIK+W D + C++T+ +GH + +++ GD +VS S D TIK+W
Sbjct: 1 SADMTIKLW-----DFQGFECIRTM----HGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 51
Query: 242 GADITR-MQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDD 300
+++ G+ W + + D T+ + + + + A + + +
Sbjct: 52 EVQTGYCVKTFTGHREWVRM--VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 109
Query: 301 LID----GP--SYKMLLK---KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
+++ P SY + + E HD V V + G + +L S +DD +++W+ N
Sbjct: 110 VVECISWAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKN 167
Score = 99 (39.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++T GH R W +P DG + ASCS D+TVR+W + CKA L E H
Sbjct: 59 VKTFTGH--REWVRMVRPNQ--DGT--LIASCSNDQTVRVWVVATKE----CKAELRE-H 107
Query: 74 TRTVRSCAWSP 84
V +W+P
Sbjct: 108 EHVVECISWAP 118
Score = 92 (37.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H VR + GK + + + D T +W+ + C+ TL HE+ V S+ ++ +
Sbjct: 135 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYK--NKRCMKTLNAHEHFVTSLDFHKTAPY 192
Query: 133 LATCGRDKSVWIWE 146
+ T D++V +WE
Sbjct: 193 VVTGSVDQTVKVWE 206
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 233 (87.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 70/236 (29%), Positives = 109/236 (46%)
Query: 8 NYELRE-IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY E I++ E H D + + PT P S S D +++W+ W+
Sbjct: 86 NYNTMEKIKSFEAHADYIRCIIVHPTL------PYILSSSDDMFIKLWDYEKG---WSNT 136
Query: 67 AVLEEMHTRTVRSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E H+ V S AW+P ATAS D T +W + + TLEGHE + SV
Sbjct: 137 QVFEG-HSHYVMSIAWNPKDTNQFATASLDKTVKVWS-INSPHPHF-TLEGHEKGINSVE 193
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + DK V IW+ CV L+GH+ +V +V +HP + ++ S S
Sbjct: 194 YFSGGEKPYLISGADDKLVKIWDYQSKT---CVQTLEGHSNNVSVVCYHPELPLILSGSE 250
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTI 238
D T+K+W S + +T+ N G +W+++F +G + DD T+
Sbjct: 251 DGTVKLW-----HSSTYRLERTL---NYG-MGFVWSMNF-LRGSNFIGLGYDDGTV 296
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 53/208 (25%), Positives = 97/208 (46%)
Query: 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG 105
S D +R++ + + K+ E H +R P+ + ++S D +W+
Sbjct: 77 SDDTYIRVYNYNTMEKI---KSF--EAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEK 131
Query: 106 GDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEV-MPGNEFECVSVLQGHA 163
G + EGH + V S++WN T AT DK+V +W + P F L+GH
Sbjct: 132 G-WSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHF----TLEGHE 186
Query: 164 QDVKMVQWHPTMD--VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 221
+ + V++ + L S + D +K+W D S CVQT+ GHS+ + +
Sbjct: 187 KGINSVEYFSGGEKPYLISGADDKLVKIW---DYQSKT--CVQTLE----GHSNNVSVVC 237
Query: 222 FNAKGDKLVSCSDDLTIKIWGADITRMQ 249
++ + ++S S+D T+K+W + R++
Sbjct: 238 YHPELPLILSGSEDGTVKLWHSSTYRLE 265
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 226 (84.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 78/288 (27%), Positives = 133/288 (46%)
Query: 83 SPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRD 139
+P+ +LA FD T + D GD L GH+ E +SWN SG LL+ D
Sbjct: 144 TPTSDVLA---FDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASD-D 199
Query: 140 KSVWIWEVM--P--GNEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAED 194
++ +W++ P G + ++ GH V+ V WH + LF S + D + +W D
Sbjct: 200 HTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---D 256
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDG 253
T S+N S S + H++ + LSFN + +++ S D T+ +W D+ ++
Sbjct: 257 TRSNN---TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--- 308
Query: 254 YASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFFVESK-------DDLIDG 304
L + + D IF V WS E I+AS D + + SK +D DG
Sbjct: 309 -----KLHSFESHKDE-IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG 362
Query: 305 PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANTL 352
P + + H ++ W+P E ++ S S+D ++++W++A +
Sbjct: 363 PPELLFI--HGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/238 (23%), Positives = 103/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W P + S S D T+ +W+ S + + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPNLSGN-----LLSASDDHTICLWDISGAPKEGKIVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 201 (75.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNAS 129
E H+ V C++ P G+ + T+S D + +W+ + GG +C+ EGH + V +S +
Sbjct: 384 EGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGG--KCLLDQEGHSDGVMGISIQSD 441
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
G+LLAT +D V IW++ G + QGH++ V V W P L S S DNT+ +
Sbjct: 442 GSLLATGSQDGLVRIWDLRSGRP---ILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVI 498
Query: 190 WWAEDTDSDNW---H-----CV----QTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237
W + H CV Q+ +NN ++S+ +++ L +CS D
Sbjct: 499 WDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNY------LATCSFDGK 552
Query: 238 IKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIAS 284
IK W + +W L T G H + S+ + I+++
Sbjct: 553 IKTWSPN-----------TWSPLATFEG-HSSKVTSIDLTNSKILST 587
Score = 192 (72.6 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 71/250 (28%), Positives = 109/250 (43%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
E + I +LEGH+D V ++ P + S DK+ R+W+ + + C +
Sbjct: 376 ETQPILSLEGHSDVVNRCSFHPCGRY------ITTSSNDKSWRLWDLESGGK---C-LLD 425
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+E H+ V + G LLAT S D IW+ G + +GH +V SV W+ +
Sbjct: 426 QEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSG--RPILYFQGHSKQVISVDWSPN 483
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH--------------P-T 174
G LA+ D +V IW++ E C +L H V V++ P
Sbjct: 484 GYQLASSSEDNTVVIWDIRK-KEQSC-QIL-AHNSIVSCVKFQKQSTQTNNNNNNSSPGC 540
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
++ L +CS+D IK W + W + T GHSS + S + K++S S
Sbjct: 541 VNYLATCSFDGKIKTW-----SPNTWSPLATFE----GHSSKV--TSIDLTNSKILSTSF 589
Query: 235 DLTIKIWGAD 244
D T KIW D
Sbjct: 590 DKTWKIWSND 599
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 76/307 (24%), Positives = 129/307 (42%)
Query: 82 WSPSGKLLATASFDATTCIWEDVG-------GDYECVATLEGHENEVKSVSWNASGTL-- 132
+SP GK +A S+ + +W G G + V+ + H + + N + L
Sbjct: 277 FSPDGKNVAIGSWSGVSKVWSVSGQKKQILAGHSQRVSCIAYHP--LSGIDGNHTKNLVN 334
Query: 133 LATCGRDKSVWIWEVMPG-----------NEFE----CVSV-------LQGHAQDVKMVQ 170
+AT D + +W ++ NE E VS+ L+GH+ V
Sbjct: 335 IATTSADSTCKLWPLLNNDNNNNNNNNNDNEEEDNDATVSIETQPILSLEGHSDVVNRCS 394
Query: 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230
+HP + + S D + ++W D +S C+ GHS + +S + G L
Sbjct: 395 FHPCGRYITTSSNDKSWRLW---DLESGG-KCLL----DQEGHSDGVMGISIQSDGSLLA 446
Query: 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADD 289
+ S D ++IW ++SG R + G H + + SV WS G +AS + D+
Sbjct: 447 TGSQDGLVRIWD-----LRSG------RPILYFQG-HSKQVISVDWSPNGYQLASSSEDN 494
Query: 290 SVQFF-VESKDD---LIDGPSYKMLLKKEK-AHDMDVNSVQWSPGERRLLASASDDGMIK 344
+V + + K+ ++ S +K +K + + N+ SPG LA+ S DG IK
Sbjct: 495 TVVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIK 554
Query: 345 IWELANT 351
W NT
Sbjct: 555 TWS-PNT 560
Score = 72 (30.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPV----FASCSGDKTVRIW 54
Q L GH+ RV +A+ P +G+DG A+ S D T ++W
Sbjct: 304 QILAGHSQRVSCIAYHPLSGIDGNHTKNLVNIATTSADSTCKLW 347
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 227 (85.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 99/358 (27%), Positives = 153/358 (42%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
QT+ GH + V +++ P DG AS SGD TVR+W+ + + CK H
Sbjct: 103 QTIAGHAEAVLCVSFSP----DGKQ--LASGSGDTTVRLWDLYTETPLFTCKG-----HK 151
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW---NASGT 131
V + AWSP GK L + S C W G+ E + L GH+ + +SW + S
Sbjct: 152 NWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEG-SPLTGHKKWITGISWEPVHLSSP 210
Query: 132 L--LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
T +D IW++ C+S GH V V+W ++++ S D TIK+
Sbjct: 211 CRRFVTSSKDGDARIWDITLKKSIICLS---GHTLAVTCVKWGGD-GIIYTGSQDCTIKM 266
Query: 190 WWAEDTDSDNWHCVQTISESNNGHS-STIWAL---SFNAKGDKLVSCSDDLTI-----KI 240
W E T ++ N + ST + L +F+ G + + K
Sbjct: 267 W--ETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKT 324
Query: 241 WGADITRMQSG-DGYAS--WRHLCT------ISGYHDRTIFSVHWSREGI-IASGAADDS 290
G R+ SG D + W + ++G H + + V++S +G IAS + D S
Sbjct: 325 KGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTG-HQQLVNHVYFSPDGKWIASASFDKS 383
Query: 291 VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
V+ + + I G + + H V V WS + RLL S S D +KIWE+
Sbjct: 384 VRLW-----NGITGQFVTVF----RGHVGPVYQVSWS-ADSRLLLSGSKDSTLKIWEI 431
Score = 193 (73.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 49/147 (33%), Positives = 72/147 (48%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
S S D T+ +WE S S + K L H + V +SP GK +A+ASFD + +W
Sbjct: 334 SGSDDFTMFLWEPSVSKQ---PKKRLTG-HQQLVNHVYFSPDGKWIASASFDKSVRLWNG 389
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163
+ G + V GH V VSW+A LL + +D ++ IWE+ + L GHA
Sbjct: 390 ITGQF--VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK---KLKQDLPGHA 444
Query: 164 QDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+V V W P + + S D +K+W
Sbjct: 445 DEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/157 (28%), Positives = 76/157 (48%)
Query: 85 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWI 144
S + L + S D T +WE + L GH+ V V ++ G +A+ DKSV +
Sbjct: 328 SPERLVSGSDDFTMFLWEP-SVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL 386
Query: 145 WEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQ 204
W + G +F V+V +GH V V W +L S S D+T+K+W +
Sbjct: 387 WNGITG-QF--VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR---------TK 434
Query: 205 TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ + GH+ ++A+ ++ G+K+VS D +K+W
Sbjct: 435 KLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 41/144 (28%), Positives = 67/144 (46%)
Query: 3 FLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF 62
FL + + + + L GH V + + P DG AS S DK+VR+W + +F
Sbjct: 342 FLWEPSVSKQPKKRLTGHQQLVNHVYFSP----DG--KWIASASFDKSVRLWN-GITGQF 394
Query: 63 WNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
+ H V +WS +LL + S D+T IWE + L GH +EV
Sbjct: 395 ----VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI--RTKKLKQDLPGHADEVF 448
Query: 123 SVSWNASGTLLATCGRDKSVWIWE 146
+V W+ G + + G+D+ + +W+
Sbjct: 449 AVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 89 (36.4 bits), Expect = 0.00047, Sum P(2) = 0.00046
Identities = 36/143 (25%), Positives = 58/143 (40%)
Query: 110 CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKM 168
C T+ GH V VS++ G LA+ D +V +W++ F C +GH V
Sbjct: 101 CSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTC----KGHKNWVLT 156
Query: 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA-LSFNAKGD 227
V W P L S S I W + + + ++ + W + ++
Sbjct: 157 VAWSPDGKHLVSGSKSGEICCWNPKKGELEG----SPLTGHKKWITGISWEPVHLSSPCR 212
Query: 228 KLVSCSDDLTIKIWGADITRMQS 250
+ V+ S D +IW DIT +S
Sbjct: 213 RFVTSSKDGDARIW--DITLKKS 233
Score = 72 (30.4 bits), Expect = 0.00047, Sum P(2) = 0.00046
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 262 TISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 320
T+ H ++ V WS + ++ SG+ D +++ + E + K L + H +
Sbjct: 396 TVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIW-EIRT--------KKLKQDLPGHADE 446
Query: 321 VNSVQWSP-GERRLLASASDDGMIKIWE 347
V +V WSP GE+ + S D ++K+W+
Sbjct: 447 VFAVDWSPDGEK--VVSGGKDRVLKLWK 472
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 222 (83.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 69/232 (29%), Positives = 109/232 (46%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGV--DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
+EI+ + GH+ + + P A D + SCS D TV +W S S
Sbjct: 238 QEIKFI-GHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGEL---- 292
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
E H + V A+ P+G LATA FD+T ++ D+ E + EGH V V+++
Sbjct: 293 -EQHPQRVSKVAFHPNGHHLATACFDSTWRMY-DLTTKKELLYQ-EGHSKSVADVAFHPD 349
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
G++ T G D +W++ G C+ L GH +++ V+W P + + S DN++KV
Sbjct: 350 GSVALTGGHDCYGRVWDMRTGR---CIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKV 406
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
W D T+ H+S + + +A G LVS S D T+K+W
Sbjct: 407 W-----DLRMRRNTYTMP----AHTSVVTRVRADAAGQYLVSASFDCTLKMW 449
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 45/173 (26%), Positives = 78/173 (45%)
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+E H+++V A+ P G + T D +W+ G C+ L+GH E+ SV W +
Sbjct: 334 QEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTG--RCIMFLDGHTKEIHSVEWMPN 391
Query: 130 GTLLATCGRDKSVWIWEV-MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188
G + T D S+ +W++ M N + + H V V+ L S S+D T+K
Sbjct: 392 GYEMITGSSDNSMKVWDLRMRRNTY----TMPAHTSVVTRVRADAAGQYLVSASFDCTLK 447
Query: 189 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+W + W ++ + GH + I + + G + S + D T K+W
Sbjct: 448 MW-----STTGWQPLRQLQ----GHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+E+ EGH+ V +A+ P V C G R+W+ R C L+
Sbjct: 329 KELLYQEGHSKSVADVAFHPDGSVALTGG--HDCYG----RVWDM----RTGRCIMFLDG 378
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT+ + S W P+G + T S D + +W D+ T+ H + V V +A+G
Sbjct: 379 -HTKEIHSVEWMPNGYEMITGSSDNSMKVW-DLRMRRNTY-TMPAHTSVVTRVRADAAGQ 435
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L + D ++ +W G ++ + LQGH + V P + S ++D T K+W
Sbjct: 436 YLVSASFDCTLKMWSTT-G--WQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWA 492
Query: 192 AED 194
D
Sbjct: 493 QSD 495
Score = 124 (48.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 38/160 (23%), Positives = 74/160 (46%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVW-IWEV 147
+ + S+D T +W + LE H V V+++ +G LAT D S W ++++
Sbjct: 269 VVSCSYDGTVLLWSL--SQESPIGELEQHPQRVSKVAFHPNGHHLATACFD-STWRMYDL 325
Query: 148 MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 207
E + +GH++ V V +HP V + +D +VW D C+ +
Sbjct: 326 TTKKE---LLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVW-----DMRTGRCIMFL- 376
Query: 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
+GH+ I ++ + G ++++ S D ++K+W + R
Sbjct: 377 ---DGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRR 413
Score = 43 (20.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
L++ + HD + V SP + + + S++ D K+W
Sbjct: 457 LRQLQGHDTRILCVDISP-DGQWMCSSAFDRTFKLW 491
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 227 (85.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 94/360 (26%), Positives = 158/360 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
++ GH + V SL + P DG AS SGD TVR+W+ + + + C H +
Sbjct: 114 SMPGHAEAVVSLNFSP----DGAH--LASGSGDTTVRLWDLNTETPHFTCTG-----HKQ 162
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-----NASG 130
V +W+P GK LA+ + IW+ G + L GH+ + ++W +
Sbjct: 163 WVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKG-RPLSGHKKHINCLAWEPYHRDPEC 221
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
LA+ D IW+V G +C+ + GH V V+W ++++ S D T+K+W
Sbjct: 222 RKLASASGDGDCRIWDVKLG---QCLMNIAGHTNAVTAVRWGGA-GLIYTSSKDRTVKMW 277
Query: 191 WAED-----TDSDNWHCVQTISESNNG--HSSTIWALSFNAKGDKLVSCSD--DLTIKIW 241
A D T S + H V I+ S + + + +K +S + + +K +
Sbjct: 278 RAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRY 337
Query: 242 GA----DITRMQS-GDGYAS--WRH---LCT--ISGYHDRTIFSVHWSRE-GIIASGAAD 288
A ++ + S D WR+ C ++G H + V +S + +IAS + D
Sbjct: 338 QAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTG-HQNVVNDVKYSPDVKLIASASFD 396
Query: 289 DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
SV+ + S DG Y + H V +V WS + RL+ S S D +K+W +
Sbjct: 397 KSVRLWRAS-----DG-QYMATFR---GHVQAVYTVAWS-ADSRLIVSGSKDSTLKVWSV 446
Score = 198 (74.8 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 81/304 (26%), Positives = 133/304 (43%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V S +SP G LA+ S D T +W D+ + T GH+ V VSW G
Sbjct: 118 HAEAVVSLNFSPDGAHLASGSGDTTVRLW-DLNTETPHF-TCTGHKQWVLCVSWAPDGKR 175
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW---H--PTMDVLFSCSYDNTI 187
LA+ + S+ IW+ G + L GH + + + W H P L S S D
Sbjct: 176 LASGCKAGSIIIWDPETGQQKG--RPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDC 233
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW-GADIT 246
++W D C+ I+ GH++ + A+ + G + + S D T+K+W AD
Sbjct: 234 RIW-----DVKLGQCLMNIA----GHTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGI 283
Query: 247 RMQSGDGYASWRHLCTIS-------G-YH---DRTIFSVHWSREGIIASG------AADD 289
++ G+A W + +S G +H DR+ + S E + S D
Sbjct: 284 LCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPD 343
Query: 290 SVQFFVESKDD---LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
V+ V DD + + +++ H VN V++SP + +L+ASAS D +++W
Sbjct: 344 EVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSP-DVKLIASASFDKSVRLW 402
Query: 347 ELAN 350
++
Sbjct: 403 RASD 406
Score = 197 (74.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 48/149 (32%), Positives = 72/149 (48%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWSPSGKLLATASFDATTCIW 101
SCS D T+ +W + + C +E M H V +SP KL+A+ASFD + +W
Sbjct: 350 SCSDDNTLYLWRNNQNK----C---VERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLW 402
Query: 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
G Y +AT GH V +V+W+A L+ + +D ++ +W V + L G
Sbjct: 403 RASDGQY--MATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK---KLAQELPG 457
Query: 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
HA +V V W P + S D IK+W
Sbjct: 458 HADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 173 (66.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 41/153 (26%), Positives = 73/153 (47%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
L + S D T +W + +CV + GH+N V V ++ L+A+ DKSV +W
Sbjct: 348 LVSCSDDNTLYLWRN--NQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRAS 405
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
G + ++ +GH Q V V W ++ S S D+T+KVW + + +++
Sbjct: 406 DG---QYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQ---------TKKLAQ 453
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH+ ++ + + G ++ S D IK+W
Sbjct: 454 ELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 153 (58.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 54/222 (24%), Positives = 104/222 (46%)
Query: 37 GVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA 96
G ++ S S D+TV++W ++A C+ H V + A S + +L T F
Sbjct: 261 GAGLIYTS-SKDRTVKMW-RAADGIL--CRTF--SGHAHWVNNIALS-TDYVLRTGPFHP 313
Query: 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL--LATCGRDKSVWIWEVMPGNEFE 154
+D + ++T E E+ +K + L +C D ++++W N+ +
Sbjct: 314 V----KDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWR---NNQNK 366
Query: 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
CV + GH V V++ P + ++ S S+D ++++W A SD + + T GH
Sbjct: 367 CVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRA----SDGQY-MATF----RGHV 417
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRM-QSGDGYA 255
++ ++++A +VS S D T+K+W ++ Q G+A
Sbjct: 418 QAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHA 459
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
N + + ++ + GH + V + + P + AS S DK+VR+W S +
Sbjct: 362 NNQNKCVERMTGHQNVVNDVKYSPDV------KLIASASFDKSVRLWRASDGQYMATFRG 415
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
H + V + AWS +L+ + S D+T +W + L GH +EV V W
Sbjct: 416 -----HVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQ--TKKLAQELPGHADEVFGVDWA 468
Query: 128 ASGTLLATCGRDKSVWIW 145
G+ +A+ G+DK + +W
Sbjct: 469 PDGSRVASGGKDKVIKLW 486
Score = 53 (23.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIW 54
+ + GHT+ V ++ W G ++ S S D+TV++W
Sbjct: 244 LMNIAGHTNAVTAVRW------GGAGLIYTS-SKDRTVKMW 277
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 226 (84.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 63/191 (32%), Positives = 90/191 (47%)
Query: 63 WNCKAVLEEM----HTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLEGH 117
WNCK H V S +SP G LLA+AS D T +W D G + + H
Sbjct: 45 WNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKS---SEFKAH 101
Query: 118 ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177
V+SV ++A G LAT DKS+ +W M F + L H V+ ++ P +
Sbjct: 102 TAPVRSVDFSADGQFLATASEDKSIKVWN-MYRQRF--LYSLYRHTHWVRCAKFSPDGRL 158
Query: 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237
+ SCS D TIK+W D+ N CV S+S G ++ + FN G + S D T
Sbjct: 159 IVSCSEDKTIKIW-----DTTNKQCVNNFSDSV-GFANFV---DFNPNGTCIASAGSDHT 209
Query: 238 IKIWGADITRM 248
+KIW + ++
Sbjct: 210 VKIWDIRVNKL 220
Score = 190 (71.9 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 58/183 (31%), Positives = 88/183 (48%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + S +SPSGK LATAS+D +W + + GH++ V SV ++ G L
Sbjct: 17 HKAAITSVDFSPSGKQLATASWDTFLMLW-NCKPQARAFRYV-GHKDVVTSVQFSPLGNL 74
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+ RD++V +W +P + S + H V+ V + L + S D +IKVW
Sbjct: 75 LASASRDRTVRLW--IPDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW-- 129
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
N + Q S H+ + F+ G +VSCS+D TIKIW D T Q +
Sbjct: 130 ------NMYR-QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVN 180
Query: 253 GYA 255
++
Sbjct: 181 NFS 183
Score = 182 (69.1 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 50/172 (29%), Positives = 81/172 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH D V S+ + P + AS S D+TVR+W + KA HT VR
Sbjct: 58 GHKDVVTSVQFSPLGNL------LASASRDRTVRLWIPDKRGKSSEFKA-----HTAPVR 106
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S +S G+ LATAS D + +W + + +L H + V+ ++ G L+ +C
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWNMYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
DK++ IW+ N+ +CV+ V ++P + S D+T+K+W
Sbjct: 165 DKTIKIWDTT--NK-QCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
Score = 179 (68.1 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 50/201 (24%), Positives = 89/201 (44%)
Query: 56 QSASSRFWNC--KAVLEEM--HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECV 111
+ S + WN + L + HT VR +SP G+L+ + S D T IW+ + +CV
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT--NKQCV 179
Query: 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
V +N +GT +A+ G D +V IW++ + V H+ V V +
Sbjct: 180 NNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQV---HSGGVNCVSF 236
Query: 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231
HP+ + + + S D T+K+ D + T+ GH+ ++ +SF+ G+ S
Sbjct: 237 HPSGNYIITASSDGTLKI-----LDLLEGRLIYTLQ----GHTGPVFTVSFSKGGELFSS 287
Query: 232 CSDDLTIKIWGADITRMQSGD 252
D + +W + + D
Sbjct: 288 GGADTQVLLWRTNFDYLNCKD 308
Score = 147 (56.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 68/263 (25%), Positives = 109/263 (41%)
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP-GNEFECVSVLQGHAQDVKMVQWHP 173
+GH+ + SV ++ SG LAT D + +W P F V GH V VQ+ P
Sbjct: 15 KGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV----GHKDVVTSVQFSP 70
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
++L S S D T+++W + S H++ + ++ F+A G L + S
Sbjct: 71 LGNLLASASRDRTVRLWIPDKRGK---------SSEFKAHTAPVRSVDFSADGQFLATAS 121
Query: 234 DDLTIKIWGADITRMQSGDGYASWRHL----CT---------ISGYHDRTIFSVHWSREG 280
+D +IK+W R Y+ +RH C +S D+TI + W
Sbjct: 122 EDKSIKVWNMYRQRFL----YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI-KI-WDTTN 175
Query: 281 IIASGAADDSVQF--FVESKDD----LIDGPSYKM---------LLKKEKAHDMDVNSVQ 325
DSV F FV+ + G + + LL+ + H VN V
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 235
Query: 326 WSPGERRLLASASDDGMIKIWEL 348
+ P ++ +AS DG +KI +L
Sbjct: 236 FHPSGNYII-TASSDGTLKILDL 257
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 50/201 (24%), Positives = 86/201 (42%)
Query: 9 YELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV 68
Y R + +L HT V + P DG + SCS DKT++IW+ + C
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSP----DG--RLIVSCSEDKTIKIWDTTNKQ----CVNN 181
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
+ ++P+G +A+A D T IW D+ + + + + H V VS++
Sbjct: 182 FSDS-VGFANFVDFNPNGTCIASAGSDHTVKIW-DIRVN-KLLQHYQVHSGGVNCVSFHP 238
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188
SG + T D ++ I +++ G + LQGH V V + ++ S D +
Sbjct: 239 SGNYIITASSDGTLKILDLLEGR---LIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVL 295
Query: 189 VWWAEDTDSDNWHCVQTISES 209
+W T+ D +C I +
Sbjct: 296 LW---RTNFDYLNCKDMIKRN 313
Score = 76 (31.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 213 HSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIF 272
HS + +SF+ G+ +++ S D T+KI D+ +G R + T+ G H +F
Sbjct: 227 HSGGVNCVSFHPSGNYIITASSDGTLKI--LDLL-----EG----RLIYTLQG-HTGPVF 274
Query: 273 SVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+V +S+ G + +SG AD V + + D L K LK+
Sbjct: 275 TVSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLKR 316
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 224 (83.9 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 69/222 (31%), Positives = 106/222 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH D V + + P+ + AS S DKTVRIW + ++ + HT TVR
Sbjct: 59 GHKDAVTCVNFSPSGHL------LASGSRDKTVRIWIPNVKG-----ESTVFRAHTATVR 107
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S + G+ L TAS D T +W + + +L H N V+ ++ G L+ +
Sbjct: 108 SVHFCSDGQSLVTASDDKTVKVWSTHRQKF--LFSLSQHINWVRCARFSPDGRLIVSASD 165
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
DK+V +W+ ECV H V V +HP+ + + S DNT+KVW D +
Sbjct: 166 DKTVKLWDK---TSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVW---DVRT- 218
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
H + + HS+ + ALSF+ G+ L++ S D T+KI
Sbjct: 219 --H---RLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKI 255
Score = 168 (64.2 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 45/169 (26%), Positives = 77/169 (45%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H VR +SP G+L+ +AS D T +W+ ECV + H V V ++ SGT
Sbjct: 144 HINWVRCARFSPDGRLIVSASDDKTVKLWDKTSR--ECVHSYCEHGGFVTYVDFHPSGTC 201
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+A D +V +W+V + Q H+ V + +HP+ + L + S D+T+K+
Sbjct: 202 IAAASMDNTVKVWDV---RTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKI--- 255
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D + T+ +GH ++F+ G+ S D + +W
Sbjct: 256 --LDLMEGRLLYTL----HGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 168 (64.2 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 50/177 (28%), Positives = 79/177 (44%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLEGHENEVKSVSWNASGT 131
H V +SPSG LLA+ S D T IW +V G+ H V+SV + + G
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGES---TVFRAHTATVRSVHFCSDGQ 116
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T DK+V +W + + + L H V+ ++ P ++ S S D T+K+W
Sbjct: 117 SLVTASDDKTVKVWST---HRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLW- 172
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248
D + CV + E H + + F+ G + + S D T+K+W R+
Sbjct: 173 ----DKTSRECVHSYCE----HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRL 221
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 55/195 (28%), Positives = 89/195 (45%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + S +S + K LA+ S D+ +W GH++ V V+++ SG L
Sbjct: 18 HRDAITSVDFSLNTKQLASGSMDSCLMVWHMK--PQSRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+ RDK+V IW +P + E +V + H V+ V + L + S D T+KVW
Sbjct: 76 LASGSRDKTVRIW--IPNVKGES-TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW-- 130
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
T + + ++S+ H + + F+ G +VS SDD T+K+W D T +
Sbjct: 131 -STHRQKF--LFSLSQ----HINWVRCARFSPDGRLIVSASDDKTVKLW--DKTSRECVH 181
Query: 253 GYASWRHLCTISGYH 267
Y T +H
Sbjct: 182 SYCEHGGFVTYVDFH 196
Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
+GH + + SV ++ + LA+ D + +W + P + GH V V + P+
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSR---AYRFAGHKDAVTCVNFSPS 72
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+L S S D T+++W V+ S H++T+ ++ F + G LV+ SD
Sbjct: 73 GHLLASGSRDKTVRIWIPN---------VKGESTVFRAHTATVRSVHFCSDGQSLVTASD 123
Query: 235 DLTIKIW 241
D T+K+W
Sbjct: 124 DKTVKVW 130
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 30/104 (28%), Positives = 55/104 (52%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
A+ S D TV++W+ + ++H+ V + ++ PSG L TAS D+T I +
Sbjct: 203 AAASMDNTVKVWDVRTHRLLQHY-----QLHSAAVNALSFHPSGNYLLTASSDSTLKILD 257
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146
+ G + TL GH+ +V+++ +G A+ G D+ V +W+
Sbjct: 258 LMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 224 (83.9 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 152 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 210
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 211 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 264
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 265 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 313
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 314 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 371
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 372 WNPNEPWVICSVSEDNIMQIWQMAENI 398
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 215 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 267
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 268 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 326
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 327 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 386
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 387 NIMQIWQMAENIYNDEESDVTTSELEGQG 415
Score = 151 (58.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 64/268 (23%), Positives = 114/268 (42%)
Query: 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWE---- 146
A FDA+ C D GG EC + HE EV + ++AT V +++
Sbjct: 90 AQFDASHCD-SDKGGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH 147
Query: 147 -VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHC 202
P EC L+ GH ++ + W+ + L S S D+T+ +W +
Sbjct: 148 PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK-- 205
Query: 203 VQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLC 261
+ GHS+ + ++++ + L S +DD + IW + S + H
Sbjct: 206 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPSHLVDAHTA 264
Query: 262 TISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV 321
++ S + E I+A+G+AD +V + DL + K+ L ++H ++
Sbjct: 265 EVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHTFESHKDEI 310
Query: 322 NSVQWSPGERRLLASASDDGMIKIWELA 349
V WSP +LAS+ D + +W+L+
Sbjct: 311 FQVHWSPHNETILASSGTDRRLNVWDLS 338
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 163 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 216
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 217 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 276
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 277 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 335 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 392
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 166 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 224
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 225 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 284
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 285 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 336
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 337 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 392
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 224 (83.9 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 152 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 210
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 211 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 264
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 265 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 313
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 314 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 371
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 372 WNPNEPWVICSVSEDNIMQIWQMAENI 398
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 215 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 267
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 268 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 326
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 327 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 386
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 387 NIMQIWQMAENIYNDEESDVTTSELEGQG 415
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 163 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 216
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 217 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 276
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 277 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 335 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 392
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 64/268 (23%), Positives = 114/268 (42%)
Query: 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWE---- 146
A FDA+ C E GG EC + HE EV + ++AT V +++
Sbjct: 90 AQFDASHCDSEK-GGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH 147
Query: 147 -VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHC 202
P EC L+ GH ++ + W+ + L S S D+T+ +W +
Sbjct: 148 PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK-- 205
Query: 203 VQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLC 261
+ GHS+ + ++++ + L S +DD + IW + S + H
Sbjct: 206 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPSHLVDAHTA 264
Query: 262 TISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV 321
++ S + E I+A+G+AD +V + DL + K+ L ++H ++
Sbjct: 265 EVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHTFESHKDEI 310
Query: 322 NSVQWSPGERRLLASASDDGMIKIWELA 349
V WSP +LAS+ D + +W+L+
Sbjct: 311 FQVHWSPHNETILASSGTDRRLNVWDLS 338
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 166 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 224
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 225 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 284
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 285 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 336
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 337 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 392
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 224 (83.9 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 73/267 (27%), Positives = 126/267 (47%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN++ G LL+ D +V +W++ G E + V
Sbjct: 160 DPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASD-DHTVCLWDISAGPKEGKIVDAK 218
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S S + H++
Sbjct: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHSVDAHTA 272
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 273 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 321
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 322 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 379
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 380 WNPNEPWVICSVSEDNIMQIWQMAENI 406
Score = 150 (57.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 50/195 (25%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ +V + HT V
Sbjct: 223 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTTSKPSHSV--DAHTAEVN 275
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 276 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASS 334
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 335 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 394
Query: 185 NTIKVW-WAEDTDSD 198
N +++W AE+ +D
Sbjct: 395 NIMQIWQMAENIYND 409
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 102/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ SA + + KA+ H
Sbjct: 171 LRGHQKEGYGLSWN--SNLKGH---LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTG-H 224
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + +++ H EV +S+N S
Sbjct: 225 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSE 284
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 285 FILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNV 342
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 343 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/236 (22%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSPS--GKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ + G LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 174 HQKEGYGLSWNSNLKGHLLS-ASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + + H +V + ++P + +L + S
Sbjct: 233 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 292
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 293 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 345 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 57/238 (23%), Positives = 103/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPNLSGN-----LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGNLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 396 NIMQIWQMAENIYNDEESDVTTSELEGQG 424
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/276 (23%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C E V G EC + HE EV + ++AT V
Sbjct: 90 AQFDASHCDSEKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 148
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 149 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 209 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 265
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 266 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 311
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 396 NIMQIWQMAENIYNDEESDVTTSELEGQG 424
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/276 (23%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C E V G EC + HE EV + ++AT V
Sbjct: 90 AQFDASHCDSEKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 148
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 149 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 209 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 265
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 266 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 311
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 156 (60.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 53/202 (26%), Positives = 95/202 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSDNWHCVQT 205
N +++W AE+ +D V T
Sbjct: 396 NIMQIWQMAENIYNDEESDVTT 417
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/276 (23%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C E V G EC + HE EV + ++AT V
Sbjct: 90 AQFDASHCDSEKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 148
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 149 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 209 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 265
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 266 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 311
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 396 NIMQIWQMAENIYNDEESDVTTSELEGQG 424
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 63/276 (22%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C + V G EC + HE EV + ++AT V
Sbjct: 90 AQFDASHCDSDKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 148
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 149 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 209 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 265
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 266 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 311
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 396 NIMQIWQMAENIYNDEESDVTTSELEGQG 424
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 63/276 (22%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C + V G EC + HE EV + ++AT V
Sbjct: 90 AQFDASHCDSDKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 148
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 149 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 209 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 265
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 266 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 311
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 396 NIMQIWQMAENIYNDEESDVTTSELEGQG 424
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 63/276 (22%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C + V G EC + HE EV + ++AT V
Sbjct: 90 AQFDASHCDSDKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 148
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 149 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 209 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 265
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 266 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 311
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 220 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 322
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 323 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 380
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 381 WNPNEPWVICSVSEDNIMQIWQMAENI 407
Score = 156 (60.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 55/205 (26%), Positives = 97/205 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 224 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 276
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 277 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISE 208
N +++W AE+ +D V T SE
Sbjct: 396 NIMQIWQMAENIYNDEESDV-TASE 419
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 63/276 (22%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C + V G EC + HE EV + ++AT V
Sbjct: 90 AQFDASHCDSDKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 148
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 149 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 209 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 265
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 266 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 311
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 57/238 (23%), Positives = 103/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPNLSGN-----LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGNLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 57/238 (23%), Positives = 103/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPNLSGN-----LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGNLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 223 (83.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 67/222 (30%), Positives = 104/222 (46%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH D V + + P+ + AS S DKTVRIW + ++ + HT TVR
Sbjct: 59 GHKDAVTCVNFSPSGHL------LASGSRDKTVRIWVPNVKG-----ESTVFRAHTATVR 107
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S + G+ L TAS D T +W + + +L H N V+ ++ G L+ +
Sbjct: 108 SVHFCSDGQSLVTASDDKTVKVWSTHRQRF--LFSLTQHINWVRCAKFSPDGRLIVSASD 165
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
DK+V +W+ EC+ H V V +HP+ + + DNT+KVW D+
Sbjct: 166 DKTVKLWDK---TSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW-----DAR 217
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
+Q HS+ + ALSF+ G+ L++ S D T+KI
Sbjct: 218 THRLLQHYQL----HSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 176 (67.0 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H VR +SP G+L+ +AS D T +W+ EC+ + H V V ++ SGT
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR--ECIHSYCEHGGFVTYVDFHPSGTC 201
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+A G D +V +W+ + Q H+ V + +HP+ + L + S D+T+K+
Sbjct: 202 IAAAGMDNTVKVWDA---RTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI--- 255
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
D + T+ +GH ++F+ G+ S D + +W ++ + GD
Sbjct: 256 --LDLMEGRLLYTL----HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGD 309
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 59/195 (30%), Positives = 87/195 (44%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H V +S + K LA+ S D+T IW T GH++ V V+++ SG L
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT--GHKDAVTCVNFSPSGHL 75
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+ RDK+V IW +P + E +V + H V+ V + L + S D T+KVW
Sbjct: 76 LASGSRDKTVRIW--VPNVKGES-TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW-- 130
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
+ H Q S H + + F+ G +VS SDD T+K+W D T +
Sbjct: 131 ------STHR-QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECIH 181
Query: 253 GYASWRHLCTISGYH 267
Y T +H
Sbjct: 182 SYCEHGGFVTYVDFH 196
Score = 152 (58.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 51/167 (30%), Positives = 73/167 (43%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW- 101
AS S D T+ IW SR + H V +SPSG LLA+ S D T IW
Sbjct: 35 ASGSMDSTLMIWHMKPQSRAYRFTG-----HKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
+V G+ H V+SV + + G L T DK+V +W F S+ Q
Sbjct: 90 PNVKGES---TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR-QRF-LFSLTQ- 143
Query: 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
H V+ ++ P ++ S S D T+K+W D + C+ + E
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLW-----DKTSRECIHSYCE 185
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
+GH + V V ++ + LA+ D ++ IW + P + GH V V + P+
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSR---AYRFTGHKDAVTCVNFSPS 72
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+L S S D T+++W + ++ T+ + H++T+ ++ F + G LV+ SD
Sbjct: 73 GHLLASGSRDKTVRIW-VPNVKGES-----TVFRA---HTATVRSVHFCSDGQSLVTASD 123
Query: 235 DLTIKIW 241
D T+K+W
Sbjct: 124 DKTVKVW 130
Score = 123 (48.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 29/104 (27%), Positives = 54/104 (51%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
A+ D TV++W+ + ++H+ V + ++ PSG L TAS D+T I +
Sbjct: 203 AAAGMDNTVKVWDARTHRLLQHY-----QLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146
+ G + TL GH+ +V+++ +G A+ G D+ V +W+
Sbjct: 258 LMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 205 (77.2 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 70/208 (33%), Positives = 100/208 (48%)
Query: 80 CA-WSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG 137
CA +SP S LAT S D T IW+ G + TL+GH V VSW+ GT LATC
Sbjct: 157 CAQFSPASSARLATGSGDNTARIWDAETGTPK--HTLKGHAGWVLGVSWSPDGTRLATCS 214
Query: 138 RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT---MDV---LFSCSYDNTIKVWW 191
DK+V IW+ G + S L+GHA+ V+ + W P D L S S D T ++W
Sbjct: 215 MDKTVRIWDPETGKQVG--SELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWT 272
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLV-SCSDDLTIKIWGA-DITRM 248
++ H + +GH ++ + + A G +V + S D T+K+W A T +
Sbjct: 273 VNTGRTE--HVL-------SGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLL 323
Query: 249 QSGDGYASW-RHLCTISGYHDRTIFSVH 275
+A W HL + + RT F H
Sbjct: 324 HDLKSHAHWVNHLALSTDFVCRTGFFDH 351
Score = 185 (70.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 54/182 (29%), Positives = 79/182 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRT 76
+ GH + + + P + A+ SGD T RIW+ + K H
Sbjct: 148 IPGHGEPILCAQFSPASSAR-----LATGSGDNTARIWDAETGTPKHTLKG-----HAGW 197
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-----SGT 131
V +WSP G LAT S D T IW+ G + + L+GH V+ ++W GT
Sbjct: 198 VLGVSWSPDGTRLATCSMDKTVRIWDPETGK-QVGSELKGHAKWVQGIAWEPLHLWRDGT 256
Query: 132 -LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIK 188
L + +D + IW V G VL GH V V+W V+++ S+D T+K
Sbjct: 257 PRLVSASKDFTARIWTVNTGRTEH---VLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVK 313
Query: 189 VW 190
VW
Sbjct: 314 VW 315
Score = 170 (64.9 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 62/184 (33%), Positives = 84/184 (45%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM--H 73
TL+GH V ++W P DG A+CS DKTVRIW+ K V E+ H
Sbjct: 190 TLKGHAGWVLGVSWSP----DGTR--LATCSMDKTVRIWDPETG------KQVGSELKGH 237
Query: 74 TRTVRSCAWSP-----SGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ V+ AW P G L +AS D T IW G E V L GH+ V V W
Sbjct: 238 AKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHV--LSGHKGSVSCVRWG 295
Query: 128 A-SGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS--- 182
A +GT ++ T DK+V +W+ + G + L+ HA V H + F C
Sbjct: 296 AGNGTGVVYTASHDKTVKVWDAVKGT---LLHDLKSHAHWVN----HLALSTDFVCRTGF 348
Query: 183 YDNT 186
+D+T
Sbjct: 349 FDHT 352
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 4 LDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
L+DG + I + GH +V + + P DG + AS D ++W + +F
Sbjct: 399 LNDGT---KPIARMIGHQKQVNHVTFSP----DG--SMIASAGWDNATKLWN-ARDGKFI 448
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
N L H V C++S +LL TAS D T +W G + L GHE+EV
Sbjct: 449 N---TLRG-HVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTG--KLATDLPGHEDEVYG 502
Query: 124 VSWNASGTLLATCGRDKSVWIW 145
V W+ G + + GRDK+V +W
Sbjct: 503 VDWSPDGQRVGSGGRDKAVRLW 524
Score = 143 (55.4 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 37/155 (23%), Positives = 77/155 (49%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
L +AS D T +++ + + +A + GH+ +V V+++ G+++A+ G D + +W
Sbjct: 384 LVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNAR 443
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT--I 206
G +F ++ L+GH V + +L + S D T+KVW N V+T +
Sbjct: 444 DG-KF--INTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVW--------N---VRTGKL 489
Query: 207 SESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ GH ++ + ++ G ++ S D +++W
Sbjct: 490 ATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 99 (39.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 44/184 (23%), Positives = 80/184 (43%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R L GH V + W AG +G V+ + S DKTV++W+ + + K+
Sbjct: 277 RTEHVLSGHKGSVSCVRWG--AG-NGTGVVYTA-SHDKTVKVWDAVKGTLLHDLKS---- 328
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H V A S + + T FD T + + + E +E + V
Sbjct: 329 -HAHWVNHLALS-TDFVCRTGFFDHTKTV--PATAEEKTAKAKERYEKAAR-VGGKIVER 383
Query: 132 LLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L++ D ++++++ P N+ + ++ + GH + V V + P ++ S +DN K+W
Sbjct: 384 LVSASD-DFTMYLFD--PLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLW 440
Query: 191 WAED 194
A D
Sbjct: 441 NARD 444
Score = 86 (35.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH + ++ SF+A LV+ S D T+K+W +++G L T H+ +
Sbjct: 453 GHVAPVYQCSFSADSRLLVTASKDTTLKVWN-----VRTGK-------LATDLPGHEDEV 500
Query: 272 FSVHWSREGI-IASGAADDSVQFF 294
+ V WS +G + SG D +V+ +
Sbjct: 501 YGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 61 (26.5 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 286 AADDSVQFFVESKDDLIDG--PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMI 343
A+DD + D L DG P +M+ H VN V +SP + ++ASA D
Sbjct: 387 ASDDFTMYLF---DPLNDGTKPIARMI-----GHQKQVNHVTFSP-DGSMIASAGWDNAT 437
Query: 344 KIW 346
K+W
Sbjct: 438 KLW 440
Score = 55 (24.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 317 HDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H+ +V V WSP +R+ S D +++W
Sbjct: 496 HEDEVYGVDWSPDGQRV-GSGGRDKAVRLW 524
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 212 (79.7 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 66/235 (28%), Positives = 104/235 (44%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
++ +GH + S + P A+ S D + +W +R + H
Sbjct: 12 RSFKGHKAAITSADFSPNC------KQIATASWDTFLMLWSLKPHARAYRYVG-----HK 60
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNASGTLL 133
V S +SP G LLA+AS D T +W D G + + H V+SV ++A G LL
Sbjct: 61 DVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKS---SEFKAHTAPVRSVDFSADGQLL 117
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193
T DKS+ +W + F + L H V+ ++ P ++ SCS D TIK+W
Sbjct: 118 VTASEDKSIKVWSMFR-QRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--- 171
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248
D+ N CV S+S G ++ + FN G + S D +KIW + ++
Sbjct: 172 --DTTNKQCVNNFSDSV-GFANFV---DFNPNGTCIASAGSDHAVKIWDIRMNKL 220
Score = 183 (69.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 48/180 (26%), Positives = 81/180 (45%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT VR +SP G+L+ + S D T IW+ + +CV V +N +GT
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT--NKQCVNNFSDSVGFANFVDFNPNGTC 200
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+A+ G D +V IW++ + V H+ V + +HP + L + S D T+K+
Sbjct: 201 IASAGSDHAVKIWDIRMNKLLQHYQV---HSCGVNCLSFHPLGNSLVTASSDGTVKM--- 254
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
D + T+ GH+ ++ +SF+ G+ L S D + IW + + D
Sbjct: 255 --LDLIEGRLIYTLQ----GHTGPVFTVSFSKDGELLTSGGADAQVLIWRTNFIHLHCKD 308
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 32/103 (31%), Positives = 50/103 (48%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
AS D V+IW+ + + ++H+ V ++ P G L TAS D T + +
Sbjct: 202 ASAGSDHAVKIWDIRMNKLLQHY-----QVHSCGVNCLSFHPLGNSLVTASSDGTVKMLD 256
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW 145
+ G + TL+GH V +VS++ G LL + G D V IW
Sbjct: 257 LIEG--RLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 52 (23.4 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
LL+ + H VN + + P L+ +AS DG +K+ +L
Sbjct: 220 LLQHYQVHSCGVNCLSFHPLGNSLV-TASSDGTVKMLDL 257
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 222 (83.2 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 127 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 185
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 186 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 239
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 240 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 288
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 289 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 346
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 347 WNPNEPWVICSVSEDNIMQVWQMAENI 373
Score = 158 (60.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 138 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 191
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 192 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 251
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 252 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 309
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 310 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 367
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 190 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 242
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 243 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 301
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 302 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 361
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 362 NIMQVWQMAENIYND 376
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 141 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 199
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 200 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 259
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 260 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 311
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 312 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 363
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 76 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 134
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 135 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 192
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 193 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 245
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 246 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 297
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 298 LASSGTDRRLNVWDLS 313
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 224 (83.9 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 205 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 263
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 264 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 317
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 318 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 366
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 367 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 424
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 425 WNPNEPWVICSVSEDNIMQIWQMAENI 451
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 268 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 320
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 321 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 379
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 380 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 439
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 440 NIMQIWQMAENIYNDEESDVTTSELEGQG 468
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 216 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 269
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 270 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 329
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 330 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 387
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 388 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 445
Score = 133 (51.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 219 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 277
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 278 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 337
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 338 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 389
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 390 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 445
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 64/276 (23%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C E V G EC + HE EV + ++AT V
Sbjct: 134 AQFDASHCDSEKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 192
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 193 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 252
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 253 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 309
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 310 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 355
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 356 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 391
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 224 (83.9 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 205 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 263
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 264 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW---DTRSNT---TSKPSHLVDAHTA 317
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D IF V
Sbjct: 318 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDE-IFQV 366
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 367 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 424
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 425 WNPNEPWVICSVSEDNIMQIWQMAENI 451
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH+ V +AW +F S + D+ + IW+ +++ + + L + HT V
Sbjct: 268 GHSAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRSNTT--SKPSHLVDAHTAEVN 320
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + T E H++E+ V W+ T+LA+
Sbjct: 321 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 379
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 380 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 439
Query: 185 NTIKVW-WAEDTDSDNWHCVQTISESNNG 212
N +++W AE+ +D V T G
Sbjct: 440 NIMQIWQMAENIYNDEESDVTTSELEGQG 468
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KA+ H
Sbjct: 216 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-H 269
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D IW+ + L + H EV +S+N S
Sbjct: 270 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 329
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ V W P + +L S D + V
Sbjct: 330 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 387
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 388 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 445
Score = 133 (51.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 219 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 277
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ + ++ H +V + ++P + +L + S
Sbjct: 278 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 337
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 338 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVHWSPHNETILASSGTDRRLNVWD 389
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 390 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 445
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 64/276 (23%), Positives = 114/276 (41%)
Query: 92 ASFDATTCIWE--------DVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSV 142
A FDA+ C E V G EC + HE EV + ++AT V
Sbjct: 134 AQFDASHCDSEKGEFGGFGSVTGKIECEIKIN-HEGEVNRARYMPQNPHIIATKTPSSDV 192
Query: 143 WIWE-----VMPGNEFECVSVLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAED 194
+++ P EC L+ GH ++ + W+ + L S S D+T+ +W
Sbjct: 193 LVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 252
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDG 253
+ + GHS+ + ++++ + L S +DD + IW + S
Sbjct: 253 GPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-SNTTSKPS 309
Query: 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313
+ H ++ S + E I+A+G+AD +V + DL + K+ L
Sbjct: 310 HLVDAHTAEVN------CLSFNPYSEFILATGSADKTVALW-----DL---RNLKLKLHT 355
Query: 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349
++H ++ V WSP +LAS+ D + +W+L+
Sbjct: 356 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 391
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 224 (83.9 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 87/337 (25%), Positives = 145/337 (43%)
Query: 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG 105
+GD T RIW+ + K H V +WSP G+++AT S D T +W+
Sbjct: 163 AGDNTARIWDCDTQTPMHTLKG-----HYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKS 217
Query: 106 GDYECVA-TLEGHENEVKSVSWN-------ASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
G +C+ L GH + S+SW S LA+ +D ++ IW+ + C
Sbjct: 218 G--QCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSR---VCQY 272
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES----NNGH 213
+ GH V V+W +L+S S+D T++VW D +S C+ + N+
Sbjct: 273 TMSGHTNSVSCVKWGG-QGLLYSGSHDRTVRVW---DINSQG-RCINILKSHAHWVNHLS 327
Query: 214 SSTIWAL---SFNAKGDK----------LVSCSDDLTIKIWGADITRMQSGDGYAS--WR 258
ST +AL +F+ G K + + + K ++ + + D Y W
Sbjct: 328 LSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWN 387
Query: 259 HL------CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLL 311
L ++G H + + V +S +G I S + D+S++ + DG K +
Sbjct: 388 PLKSTKPIARMTG-HQKLVNHVAFSPDGRYIVSASFDNSIKLW--------DGRDGKFI- 437
Query: 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ H V V WS + RLL S S D +K+W++
Sbjct: 438 STFRGHVASVYQVAWS-SDCRLLVSCSKDTTLKVWDV 473
Score = 202 (76.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 86/309 (27%), Positives = 142/309 (45%)
Query: 73 HTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYEC-VATLEGHENEVKSVSWNASG 130
H T+ A++P + + T + D T IW+ D + + TL+GH N V VSW+ G
Sbjct: 142 HGSTILCSAFAPHTSSRMVTGAGDNTARIWDC---DTQTPMHTLKGHYNWVLCVSWSPDG 198
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVS-VLQGHAQDVKMVQWHPTMDV-------LFSCS 182
++AT D ++ +W+ G +C+ L+GH++ + + W P V L S S
Sbjct: 199 EVIATGSMDNTIRLWDPKSG---QCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSS 255
Query: 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW- 241
D TIK+W DT S C T+S GH++++ + + +G L S S D T+++W
Sbjct: 256 KDGTIKIW---DTVSRV--CQYTMS----GHTNSVSCVKWGGQG-LLYSGSHDRTVRVWD 305
Query: 242 ----GADITRMQSGDGYASW-RHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 296
G I ++S +A W HL + Y R H ++ A +++ + +
Sbjct: 306 INSQGRCINILKS---HAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEK 362
Query: 297 -------SKDDLIDGPS-YKMLL----KKEK------AHDMDVNSVQWSPGERRLLASAS 338
S++ ++ Y M L K K H VN V +SP + R + SAS
Sbjct: 363 ICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP-DGRYIVSAS 421
Query: 339 DDGMIKIWE 347
D IK+W+
Sbjct: 422 FDNSIKLWD 430
Score = 185 (70.2 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 48/157 (30%), Positives = 78/157 (49%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TL+GH + V ++W P DG V A+ S D T+R+W+ + C H
Sbjct: 179 MHTLKGHYNWVLCVSWSP----DG--EVIATGSMDNTIRLWDPKSGQ----CLGDALRGH 228
Query: 74 TRTVRSCAWSP-------SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
++ + S +W P S LA++S D T IW+ V C T+ GH N V V W
Sbjct: 229 SKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSR--VCQYTMSGHTNSVSCVKW 286
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163
G LL + D++V +W++ ++ C+++L+ HA
Sbjct: 287 GGQG-LLYSGSHDRTVRVWDI--NSQGRCINILKSHA 320
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 40/157 (25%), Positives = 76/157 (48%)
Query: 85 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWI 144
S +++ TAS D T +W + + +A + GH+ V V+++ G + + D S+ +
Sbjct: 370 SEEMMVTASDDYTMFLWNPLKST-KPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKL 428
Query: 145 WEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQ 204
W+ G + + +S +GH V V W +L SCS D T+KVW D + +
Sbjct: 429 WD---GRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW---DVRT------R 476
Query: 205 TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+S GH ++ + ++ G ++ S D +++W
Sbjct: 477 KLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ + S D T+ +W S++ H + V A+SP G+ + +ASFD + +
Sbjct: 373 MMVTASDDYTMFLWNPLKSTK----PIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKL 428
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSV-L 159
W+ G D + ++T GH V V+W++ LL +C +D ++ +W+V +SV L
Sbjct: 429 WD--GRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRK----LSVDL 482
Query: 160 QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
GH +V V W + S D +++W
Sbjct: 483 PGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 136 (52.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 37/110 (33%), Positives = 54/110 (49%)
Query: 17 LEGHTDRVWSLAWKPTAGVD-GVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
L GH+ + SL+W+P V G P AS S D T++IW+ SR C+ + HT
Sbjct: 225 LRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD--TVSRV--CQYTMSG-HTN 279
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
+V W G LL + S D T +W D+ C+ L+ H + V +S
Sbjct: 280 SVSCVKWGGQG-LLYSGSHDRTVRVW-DINSQGRCINILKSHAHWVNHLS 327
Score = 64 (27.6 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 258 RHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFF-VESKDDLIDGPSYKMLLKKEK 315
+ + T G H +++ V WS + ++ S + D +++ + V ++ +D P +K
Sbjct: 435 KFISTFRG-HVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHK------- 486
Query: 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
D +V +V WS +R+ S D M+++W
Sbjct: 487 --D-EVYTVDWSVDGKRV-CSGGKDKMVRLW 513
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 222 (83.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 51/195 (26%), Positives = 93/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ ++D
Sbjct: 397 NIMQVWQMAENINND 411
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 222 (83.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 222 (83.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 222 (83.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 222 (83.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 222 (83.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 222 (83.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 222 (83.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G +
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + H++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAHTA 274
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/238 (24%), Positives = 104/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGH---LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + +++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ +V + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHSV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGHLLS-ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + V GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK--VVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S ++ H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 224 (83.9 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 83/294 (28%), Positives = 133/294 (45%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
N EL I TL H ++SL W + S D+T +W+ A W +
Sbjct: 354 NGEL--ISTLSKHKGPIFSLKWNKKGDY------LLTGSVDRTAVVWDVKAEE--WKQQF 403
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
E H+ W + AT+S D+ + + G+ T GH+ EV V W+
Sbjct: 404 ---EFHSGPTLDVDWR-NNVSFATSSTDSMIYLCKI--GETRPAKTFTGHQGEVNCVKWD 457
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD---------VL 178
+G+LLA+C D + IW + F V L+ H +++ ++W PT L
Sbjct: 458 PTGSLLASCSDDSTAKIWNIKQST-F--VHDLREHTKEIYTIRWSPTGPGTNNPNKQLTL 514
Query: 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTI 238
S S+D+T+K+W D + C S NGH +++L+F+ G+ + S S D +I
Sbjct: 515 ASASFDSTVKLW---DAELGKMLC------SFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Query: 239 KIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSV 291
IW ++ G + + T +G + IF V W++EG IA+ AD+SV
Sbjct: 566 HIWS-----IKEG------KIVKTYTG--NGGIFEVCWNKEGNKIAACFADNSV 606
Score = 215 (80.7 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 74/244 (30%), Positives = 113/244 (46%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIW---EQS--ASSRFWNCKA 67
+++ LEGHT V + AW P+A + AS SGD T RIW E S A N A
Sbjct: 257 DVRILEGHTSEVCACAWSPSASL------LASGSGDATARIWSIPEGSFKAVHTGRNINA 310
Query: 68 VL-------EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120
++ ++ V + W+ G LLAT S D IW + G E ++TL H+
Sbjct: 311 LILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWT-LNG--ELISTLSKHKGP 367
Query: 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180
+ S+ WN G L T D++ +W+V E++ + H+ PT+DV
Sbjct: 368 IFSLKWNKKGDYLLTGSVDRTAVVWDVK-AEEWK--QQFEFHSG--------PTLDV--- 413
Query: 181 CSYDNTIKVWWAEDTDSDNWHCV--QTI-SESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237
+ N + + TDS + C +T +++ GH + + ++ G L SCSDD T
Sbjct: 414 -DWRNNVS-FATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDST 471
Query: 238 IKIW 241
KIW
Sbjct: 472 AKIW 475
Score = 189 (71.6 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 55/159 (34%), Positives = 73/159 (45%)
Query: 57 SASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT--- 113
S +S N + E HT V +CAWSPS LLA+ S DAT IW G ++ V T
Sbjct: 248 SQTSHIPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRN 307
Query: 114 --------LEGHENE----VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
+G NE V ++ WN GTLLAT D IW + G E +S L
Sbjct: 308 INALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIW-TLNG---ELISTLSK 363
Query: 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW 200
H + ++W+ D L + S D T VW D ++ W
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVW---DVKAEEW 399
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
T + DV + E E H V W + AT D +++ ++ E
Sbjct: 388 TAVVWDVKAE-EWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCKI---GETRPAK 442
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
GH +V V+W PT +L SCS D+T K+W + + V + E H+ I
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTF-----VHDLRE----HTKEI 493
Query: 218 WALSFNAKG------DK---LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHD 268
+ + ++ G +K L S S D T+K+W A++ +M LC+ +G H
Sbjct: 494 YTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKM-----------LCSFNG-HR 541
Query: 269 RTIFSVHWSREG-IIASGAADDSVQFF 294
++S+ +S G IASG+ D S+ +
Sbjct: 542 EPVYSLAFSPNGEYIASGSLDKSIHIW 568
Score = 147 (56.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 14 IQTLEGHTDRVWSLAWKPTA-GVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+ L HT ++++ W PT G + AS S D TV++W+ +
Sbjct: 483 VHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNG--- 539
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V S A+SP+G+ +A+ S D + IW G + V T G+ + V WN G
Sbjct: 540 --HREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG--KIVKTYTGNGG-IFEVCWNKEG 594
Query: 131 TLLATCGRDKSVWI 144
+A C D SV +
Sbjct: 595 NKIAACFADNSVCV 608
Score = 79 (32.9 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 31/98 (31%), Positives = 42/98 (42%)
Query: 263 ISGYHDRT--IFSV---HWSREGIIASGAADD-----SVQFFVESKDDLID--GPSYKML 310
++G DRT ++ V W ++ SG D +V F S D +I
Sbjct: 381 LTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRP 440
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
K H +VN V+W P LLAS SDD KIW +
Sbjct: 441 AKTFTGHQGEVNCVKWDP-TGSLLASCSDDSTAKIWNI 477
Score = 67 (28.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 262 TISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV 321
T +G H + V W G + + +DDS K + + H ++
Sbjct: 443 TFTG-HQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTF--------VHDLREHTKEI 493
Query: 322 NSVQWSP-G------ERRL-LASASDDGMIKIWE 347
+++WSP G ++L LASAS D +K+W+
Sbjct: 494 YTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD 527
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 202 (76.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 57/216 (26%), Positives = 109/216 (50%)
Query: 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156
T +W+ G +EC+ T+ GH++ V SV+ +G + + RDK++ +WEV G CV
Sbjct: 2 TIKLWDFQG--FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY---CV 56
Query: 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-----DNWHCVQTIS---E 208
GH + V+MV+ + ++ SCS D T++VW + ++ H V+ IS E
Sbjct: 57 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 116
Query: 209 SNN-----------GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASW 257
S+ GH + + + F++ G ++SC+DD T+++W Y +
Sbjct: 117 SSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD-----------YKNK 165
Query: 258 RHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQ 292
R + T++ H+ + S+ + + + +G+ D +V+
Sbjct: 166 RCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVK 200
Score = 190 (71.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 63/217 (29%), Positives = 100/217 (46%)
Query: 50 TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYE 109
T+++W+ + C + H V S A P+G + +AS D T +WE G Y
Sbjct: 2 TIKLWDFQG----FECIRTMHG-HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-Y- 54
Query: 110 CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV--------MPGNEF--ECVS-- 157
CV T GH V+ V N GTL+A+C D++V +W V + +E EC+S
Sbjct: 55 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 114
Query: 158 -------VLQ------GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQ 204
+ + GH V+ V +H + SC+ D T++VW D N C++
Sbjct: 115 PESSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVW-----DYKNKRCMK 169
Query: 205 TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
T+ N H + +L F+ +V+ S D T+K+W
Sbjct: 170 TL----NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 120 (47.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I+T+ GH V S+A P D + S S DKT+++WE C H
Sbjct: 14 IRTMHGHDHNVSSVAIMPNG--DHIV----SASRDKTIKMWEVQTGY----CVKTFTG-H 62
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
VR + G L+A+ S D T +W V EC A L HE+ V+ +SW
Sbjct: 63 REWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISW 113
Score = 99 (39.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++T GH R W +P DG + ASCS D+TVR+W + CKA L E H
Sbjct: 56 VKTFTGH--REWVRMVRPNQ--DGT--LIASCSNDQTVRVWVVATKE----CKAELRE-H 104
Query: 74 TRTVRSCAWSP 84
V +W+P
Sbjct: 105 EHVVECISWAP 115
Score = 92 (37.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H VR + GK + + + D T +W+ + C+ TL HE+ V S+ ++ +
Sbjct: 132 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYK--NKRCMKTLNAHEHFVTSLDFHKTAPY 189
Query: 133 LATCGRDKSVWIWE 146
+ T D++V +WE
Sbjct: 190 VVTGSVDQTVKVWE 203
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 222 (83.2 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 64/231 (27%), Positives = 107/231 (46%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVD-GVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
I+TL GH V ++++ P A + + V ASC+ D +V++W + + E
Sbjct: 251 IRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADI-----E 305
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H+ V W PSG+ L T +D + +W D+ E + EGH V + ++ G+
Sbjct: 306 GHSMRVARVTWHPSGRFLGTTCYDHSWRLW-DLEVQEE-ILHQEGHSKGVHDLHFHPDGS 363
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T G D +W++ G CV L+GH +++ + + P + + S DN KVW
Sbjct: 364 LAGTGGLDSFARVWDLRTGR---CVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVW- 419
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
D C+ TI H + + ++ F G L++ + D T KIW
Sbjct: 420 ----DLRQRRCIYTIP----AHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW 462
Score = 210 (79.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 58/228 (25%), Positives = 107/228 (46%)
Query: 23 RVWSL-AWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKA---VL-EEMHT 74
++WSL + +P A ++G + A + + R + S R W+ + +L +E H+
Sbjct: 291 KLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHS 350
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
+ V + P G L T D+ +W+ G CV LEGH E+ S++++ +G +A
Sbjct: 351 KGVHDLHFHPDGSLAGTGGLDSFARVWDLRTG--RCVMFLEGHIKEIYSINFSPNGFHVA 408
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAE 193
T D + +W++ + C+ + H V V++ P L + +YDNT K+W
Sbjct: 409 TGSGDNACKVWDL---RQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW--- 462
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
W ++T++ GH + + + G + +CS D T K+W
Sbjct: 463 --THPGWSPLKTLA----GHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 180 (68.4 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 56/182 (30%), Positives = 82/182 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
EI EGH+ V L + P + G + D R+W+ R C LE
Sbjct: 342 EILHQEGHSKGVHDLHFHPDGSLAGTGGL------DSFARVWDL----RTGRCVMFLEG- 390
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-GT 131
H + + S +SP+G +AT S D +W D+ C+ T+ H+N V SV + + G
Sbjct: 391 HIKEIYSINFSPNGFHVATGSGDNACKVW-DLR-QRRCIYTIPAHQNLVSSVKFQPNDGH 448
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T D + IW PG + + L GH V V P ++ +CSYD T K+W
Sbjct: 449 YLLTGAYDNTAKIW-THPG--WSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLWM 505
Query: 192 AE 193
+E
Sbjct: 506 SE 507
Score = 172 (65.6 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-- 132
R + C +SP+ KLL TAS+ +W+ D + TL GH V ++S++ TL
Sbjct: 217 RPISYCQFSPNSKLLVTASWSGLCKLWKVP--DCTLIRTLRGHNTNVGAISFHPQATLTL 274
Query: 133 ------LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
+A+C D SV +W + + E ++ ++GH+ V V WHP+ L + YD++
Sbjct: 275 EESDVNMASCAADGSVKLWSL---DSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHS 331
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W E VQ GHS + L F+ G + D ++W
Sbjct: 332 WRLWDLE---------VQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVW 377
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R + LEGH ++S+ + P G A+ SGD ++W+ + A
Sbjct: 383 RCVMFLEGHIKEIYSINFSPN-GFH-----VATGSGDNACKVWDLRQRRCIYTIPA---- 432
Query: 72 MHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V S + P+ G L T ++D T IW G + + TL GHE +V V + G
Sbjct: 433 -HQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPG--WSPLKTLAGHEGKVMGVDLSPDG 489
Query: 131 TLLATCGRDKSVWIW 145
L+ATC D++ +W
Sbjct: 490 QLIATCSYDRTFKLW 504
Score = 68 (29.0 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H + I+S+++S G +A+G+ D++ + + DL + + AH V+SV+
Sbjct: 391 HIKEIYSINFSPNGFHVATGSGDNACKVW-----DL----RQRRCIYTIPAHQNLVSSVK 441
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ P + L + + D KIW
Sbjct: 442 FQPNDGHYLLTGAYDNTAKIW 462
Score = 51 (23.0 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 24/91 (26%), Positives = 41/91 (45%)
Query: 258 RHLCTISGYHDRTIFSVHWS-REG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK 315
R + TI H + SV + +G + +GA D++ + + P + L K
Sbjct: 425 RCIYTIPA-HQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTH--------PGWSPL-KTLA 474
Query: 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H+ V V SP + +L+A+ S D K+W
Sbjct: 475 GHEGKVMGVDLSP-DGQLIATCSYDRTFKLW 504
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 211 (79.3 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 73/229 (31%), Positives = 104/229 (45%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSG--DKTVRIWEQSASSRFWNCKAVLEEM 72
QTL GH V +A +P D V A SG D V++W + + + M
Sbjct: 297 QTLRGHASYVGGVALRPGVKADE-ENVVAMASGGHDGAVKLWGFNNEESIAD---ITGHM 352
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
R V A+ PSG+ LATA +D++ +W D+ E V EGH V +S+++ G++
Sbjct: 353 PHR-VSKVAFHPSGRFLATACYDSSWRLW-DLEQKTE-VLHQEGHAKPVHCLSYHSDGSV 409
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
L T G D +W++ G C+ L+GH V V + P + + S DNT K+W
Sbjct: 410 LVTGGLDAFGRVWDLRTGR---CIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIW-- 464
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D V TI N S + G LV+CS D T KIW
Sbjct: 465 ---DLRRRQPVYTIPAHTNLISDVKYQQEC---GSFLVTCSYDSTTKIW 507
Score = 180 (68.4 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 56/232 (24%), Positives = 98/232 (42%)
Query: 14 IQTLEGHTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
I + GH RV +A+ P+ A+ D + R+W+ + + + +E
Sbjct: 345 IADITGHMPHRVSKVAFHPSGRF------LATACYDSSWRLWDLEQKT-----EVLHQEG 393
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + V ++ G +L T DA +W+ G C+ LEGH V V ++ +G
Sbjct: 394 HAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTG--RCIMFLEGHLGAVFGVDFSPNGFH 451
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+AT +D + IW++ + DVK Q L +CSYD+T K+W
Sbjct: 452 IATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQ--ECGSFLVTCSYDSTTKIW-- 507
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
+ W ++T+ GH + + ++ + + S D T K+W D
Sbjct: 508 ---SNKTWQPLKTLQ----GHDNKVISVDIAPNSQYIATTSFDRTFKLWSPD 552
Score = 131 (51.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 48/176 (27%), Positives = 79/176 (44%)
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA----- 128
TR V S A+S LL T+S+ +W D E TL GH + V V+
Sbjct: 261 TRPVSSAAFSEDSSLLLTSSWSGLCKLWSVP--DCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 129 --SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD-VKMVQWHPTMDVLFSCSYDN 185
+ +A+ G D +V +W NE E ++ + GH V V +HP+ L + YD+
Sbjct: 319 EENVVAMASGGHDGAVKLWGF--NNE-ESIADITGHMPHRVSKVAFHPSGRFLATACYDS 375
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ ++W E ++ H GH+ + LS+++ G LV+ D ++W
Sbjct: 376 SWRLWDLEQK-TEVLH--------QEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVW 422
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I LEGH V+ + + P G A+ S D T +IW+ + A
Sbjct: 428 RCIMFLEGHLGAVFGVDFSPN-GFH-----IATGSQDNTCKIWDLRRRQPVYTIPA---- 477
Query: 72 MHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
HT + + G L T S+D+TT IW + ++ + TL+GH+N+V SV +
Sbjct: 478 -HTNLISDVKYQQECGSFLVTCSYDSTTKIWSNK--TWQPLKTLQGHDNKVISVDIAPNS 534
Query: 131 TLLATCGRDKSVWIW 145
+AT D++ +W
Sbjct: 535 QYIATTSFDRTFKLW 549
Score = 51 (23.0 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
LK + HD V SV +P + +A+ S D K+W
Sbjct: 515 LKTLQGHDNKVISVDIAPNSQ-YIATTSFDRTFKLW 549
Score = 46 (21.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H +F V +S G IA+G+ D++ + + + P Y + AH ++ V+
Sbjct: 436 HLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQ----PVYTI-----PAHTNLISDVK 486
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ L + S D KIW
Sbjct: 487 YQQECGSFLVTCSYDSTTKIW 507
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 321 VNSVQWSPGERRLLASASDDGMIKIWEL 348
V V +SP + A+ S D KIW+L
Sbjct: 440 VFGVDFSPNGFHI-ATGSQDNTCKIWDL 466
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 225 (84.3 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 57/187 (30%), Positives = 94/187 (50%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L ++ + E H+D + +A PT P+ + S D +++W + W C+
Sbjct: 85 NYNTLEKVHSFEAHSDYLRCIAVHPTQ------PLVLTSSDDMLIKLWNWE---KMWACQ 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V ++P A+AS D T +W+ +G ++ TLEGHE V V
Sbjct: 136 RVFEG-HTHYVMQIVFNPKDNNTFASASLDRTVKVWQ-LGSNFANF-TLEGHEKGVNCVD 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ G L + D+ V IW+ N+ CV L+GHAQ++ V +HP + ++ + S
Sbjct: 193 YYHGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNISAVCFHPELPIVLTGSE 249
Query: 184 DNTIKVW 190
D T+++W
Sbjct: 250 DGTVRIW 256
Score = 174 (66.3 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 56/215 (26%), Positives = 102/215 (47%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ L+ T+S D +W + + C EGH + V + +N
Sbjct: 96 EAHSDYLRCIAVHPTQPLVLTSSDDMLIKLW-NWEKMWACQRVFEGHTHYVMQIVFNPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D++V +W++ G+ F + L+GH + V V ++ D L S + D +
Sbjct: 155 NNTFASASLDRTVKVWQL--GSNFANFT-LEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ I A+ F+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQTLE----GHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYR 262
Query: 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREGII 282
+++ Y + + TIS ++ + II
Sbjct: 263 LETCLNYG-FERVWTISSMRGTNNVALGYDEGSII 296
Score = 41 (19.5 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKD 299
+ SG + W L + + +V W+ G + A DDS +FV D
Sbjct: 444 KTSSGLAFYDWETLQLVRRIEVQPK-NVFWNESGSLVCLATDDS--YFVLGVD 493
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 220 (82.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 63/222 (28%), Positives = 108/222 (48%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHTD + + + P+ + AS S D+TVR+W S KA HT +VR
Sbjct: 58 GHTDVITGVNFAPSGSL------VASSSRDQTVRLWTPSIKGESTVFKA-----HTASVR 106
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S +S G+ L TAS D + +W + + +L H N V+ ++ G L+A+CG
Sbjct: 107 SVHFSRDGQRLVTASDDKSVKVWGVERKKF--LYSLNRHTNWVRCARFSPDGRLIASCGD 164
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
D++V +W+ + +C+++ + V ++ + + S DNTIK+W D ++
Sbjct: 165 DRTVRLWDT---SSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIW---DIRTN 218
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
+ + H++ + SF+ G+ L+S S D TIKI
Sbjct: 219 K------LIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKI 254
Score = 188 (71.2 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 67/233 (28%), Positives = 109/233 (46%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNASGT 131
HT + ++PSG L+A++S D T +W + G+ + H V+SV ++ G
Sbjct: 59 HTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGES---TVFKAHTASVRSVHFSRDGQ 115
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T DKSV +W V +F + L H V+ ++ P ++ SC D T+++W
Sbjct: 116 RLVTASDDKSVKVWGV-ERKKF--LYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLW- 171
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251
DT S C+ ++ G S+T + FN+ G + S D TIKIW DI +
Sbjct: 172 --DTSSHQ--CINIFTDY--GGSATF--VDFNSSGTCIASSGADNTIKIW--DIRTNKLI 221
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDG 304
Y H ++ FS H S +I SG++D +++ DL++G
Sbjct: 222 QHYKV--HNAGVN------CFSFHPSGNYLI-SGSSDSTIKIL-----DLLEG 260
Score = 187 (70.9 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 60/230 (26%), Positives = 100/230 (43%)
Query: 21 TDRVW--SLAWKPT---AGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC--KAVLEEM- 72
T R+W S+ + T A V V S G + V + S + W K L +
Sbjct: 83 TVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDK-SVKVWGVERKKFLYSLN 141
Query: 73 -HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
HT VR +SP G+L+A+ D T +W+ ++C+ + V +N+SGT
Sbjct: 142 RHTNWVRCARFSPDGRLIASCGDDRTVRLWDT--SSHQCINIFTDYGGSATFVDFNSSGT 199
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
+A+ G D ++ IW++ + V H V +HP+ + L S S D+TIK+
Sbjct: 200 CIASSGADNTIKIWDIRTNKLIQHYKV---HNAGVNCFSFHPSGNYLISGSSDSTIKI-- 254
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D + T+ +GH + ++F+ GD S D + +W
Sbjct: 255 ---LDLLEGRLIYTL----HGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 168 (64.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 48/168 (28%), Positives = 83/168 (49%)
Query: 75 RTVRSCA-WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ V SCA ++P+ K LAT S D + IW ++ + GH + + V++ SG+L+
Sbjct: 18 KDVISCADFNPNNKQLATGSCDKSLMIW-NLAPKARAFRFV-GHTDVITGVNFAPSGSLV 75
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193
A+ RD++V +W P + E +V + H V+ V + L + S D ++KVW E
Sbjct: 76 ASSSRDQTVRLWT--PSIKGES-TVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVE 132
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ S N H++ + F+ G + SC DD T+++W
Sbjct: 133 R---------KKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLW 171
Score = 154 (59.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 39/145 (26%), Positives = 75/145 (51%)
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP-GNEFECVSVLQGHAQDVKMVQWHP 173
+GH++ + +N + LAT DKS+ IW + P F V GH + V + P
Sbjct: 15 KGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV----GHTDVITGVNFAP 70
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
+ ++ S S D T+++W T S ++ S H++++ ++ F+ G +LV+ S
Sbjct: 71 SGSLVASSSRDQTVRLW----TPS-----IKGESTVFKAHTASVRSVHFSRDGQRLVTAS 121
Query: 234 DDLTIKIWGADITR-MQSGDGYASW 257
DD ++K+WG + + + S + + +W
Sbjct: 122 DDKSVKVWGVERKKFLYSLNRHTNW 146
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 31/104 (29%), Positives = 52/104 (50%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
AS D T++IW+ + + K +H V ++ PSG L + S D+T I +
Sbjct: 202 ASSGADNTIKIWDIRTNKLIQHYK-----VHNAGVNCFSFHPSGNYLISGSSDSTIKILD 256
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146
+ G + TL GH+ V +V+++ G L A+ G D V +W+
Sbjct: 257 LLEG--RLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 42 (19.8 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 334 LASASDDGMIKIWEL 348
+AS+ D IKIW++
Sbjct: 201 IASSGADNTIKIWDI 215
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 70/259 (27%), Positives = 116/259 (44%)
Query: 40 PVFASCSGDKTVRIWEQSASS--RFW----NCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93
PV+++ + SA + R W N V + H V +SP G A+ S
Sbjct: 420 PVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCS 479
Query: 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153
D T IW + + + GH ++V V W+ + +AT DK+V +W+V G
Sbjct: 480 HDRTARIWSM--DRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG--- 534
Query: 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGH 213
ECV + GH V + P + S D TI +W D C+ + GH
Sbjct: 535 ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW-----DLSTARCITPLM----GH 585
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIW----GADITRMQSGDGYAS-WRHLCTISGYHD 268
+S +W+LS++ +G L S S D T+K+W +T+ + +G ++ R L T
Sbjct: 586 NSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPT-KS 644
Query: 269 RTIFSVHWSREGII-ASGA 286
+ ++ +SR ++ A+GA
Sbjct: 645 TPVHALRFSRRNLLFAAGA 663
Score = 195 (73.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 47/176 (26%), Positives = 81/176 (46%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWED-VGGDYECVATLEGHENEVKSVSWNASGT 131
H+ V S +SP G + ++S D T +W + + C +GH V ++ G
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDAQFSPFGH 473
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
A+C D++ IW + + + + ++ GH DV VQWHP + + + S D T+++W
Sbjct: 474 YFASCSHDRTARIWSM---DRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLW- 529
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
D CV+ GH S + +L+ + G + S +D TI +W R
Sbjct: 530 ----DVQTGECVRIFI----GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTAR 577
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 53/217 (24%), Positives = 91/217 (41%)
Query: 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
++L GH+ V + P D + S S D TI++W + + N C + GH+
Sbjct: 412 TLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKL--NANLVCYK-------GHNYP 462
Query: 217 IWALSFNAKGDKLVSCSDDLTIKIWGAD-ITRMQSGDGYAS------WRHLCTI--SGYH 267
+W F+ G SCS D T +IW D I ++ G+ S W C +G
Sbjct: 463 VWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSS 522
Query: 268 DRTI----------FSVHWSREGIIASGAADDSVQFFVESKDD---LIDGPSYKMLLKKE 314
D+T+ + ++ S A ++ +D ++ S +
Sbjct: 523 DKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPL 582
Query: 315 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351
H+ V S+ +S GE LLAS S D +K+W++ ++
Sbjct: 583 MGHNSCVWSLSYS-GEGSLLASGSADCTVKLWDVTSS 618
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 113 TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 147
T N + S + G+L+A D S+ +W++
Sbjct: 347 TFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDM 381
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/232 (28%), Positives = 110/232 (47%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ + S D T+R+W+ + A L H VR + G + + +D T I
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHL----ATLHGHHA-AVRCVQFD--GTTVVSGGYDFTVKI 402
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W G C+ TL GH N V S+ + + +++ + D S+ +W+ ECV++LQ
Sbjct: 403 WNAHTG--RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
GH +Q ++L SC+ D+ ++VW D CV +S GH S I +L
Sbjct: 461 GHTSLTSGMQLRG--NILVSCNADSHVRVW-----DIHEGTCVHMLS----GHRSAITSL 509
Query: 221 SFNAKGDKLVSCSDDLTIKIW----GA---DITRMQSG-DGYASWRHLCTIS 264
+ + + + + SDD T+K+W GA D+ + SG +G WR LC+ S
Sbjct: 510 QWFGR-NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWR-LCSTS 559
Score = 140 (54.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 46 SGDKTVRIWEQSASSRFWNCKAVLEEM----HTRTVRSCAWSPSGKLLATASFDATTCIW 101
+ DK+ R + WN ++ H V +C +L T S D T +W
Sbjct: 224 AADKS-RYLRADKIEKNWNANPIMGSAVLRGHEDHVITCM-QIHDDVLVTGSDDNTLKVW 281
Query: 102 -EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
D G E + TL GH V + + G + + D++V +W + G+ + LQ
Sbjct: 282 CIDKG---EVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS---LLHTLQ 335
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
GH V+ + + +L + S D T++VW D +S H + T+ +GH + + +
Sbjct: 336 GHTSTVRCMAMAGS--ILVTGSRDTTLRVW---DVESGR-H-LATL----HGHHAAVRCV 384
Query: 221 SFNAKGDKLVSCSDDLTIKIWGADITR 247
F+ G +VS D T+KIW A R
Sbjct: 385 QFD--GTTVVSGGYDFTVKIWNAHTGR 409
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSG--DKTVRIWEQSASSRFWNCKAVL 69
R I+TL GH +RV+SL ++ + CSG D ++R+W+ + C A+L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSI--------VCSGSLDTSIRVWDFTRPEG-QECVALL 459
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ HT + G +L + + D+ +W+ G CV L GH + + S+ W
Sbjct: 460 QG-HTSL--TSGMQLRGNILVSCNADSHVRVWDIHEGT--CVHMLSGHRSAITSLQWFGR 514
Query: 130 GTLLATCGRDKSVWIWEVMPG 150
++AT D +V +W++ G
Sbjct: 515 N-MVATSSDDGTVKLWDIERG 534
Score = 119 (46.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL GHT VW T+ + S S D+TV++W S + HT
Sbjct: 291 TLVGHTGGVW------TSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQG-----HTS 339
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
TVR A + G +L T S D T +W+ G + +ATL GH V+ V ++ +
Sbjct: 340 TVRCMAMA--GSILVTGSRDTTLRVWDVESGRH--LATLHGHHAAVRCVQFDGT 389
Score = 107 (42.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 34/111 (30%), Positives = 53/111 (47%)
Query: 157 SVLQGHAQDV-KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
+VL+GH V +Q H DVL + S DNT+KVW D + T+ GH+
Sbjct: 249 AVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCI-----DKGEVMYTLV----GHTG 297
Query: 216 TIWALSFNAKGDKLVSCSDDLTIKIWGA-DITRMQSGDGYASWRHLCTISG 265
+W + G +VS S D T+K+W D + + + G+ S ++G
Sbjct: 298 GVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG 348
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 33/138 (23%), Positives = 66/138 (47%)
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT 270
+GH + + + F+ G +VS D T+KIW A +G R + T++G+++R
Sbjct: 375 HGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNA-----HTG------RCIRTLTGHNNRV 421
Query: 271 IFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ S I+ SG+ D S++ + ++ + G LL+ H + +Q G
Sbjct: 422 YSLLFESERSIVCSGSLDTSIRVWDFTRPE---GQECVALLQ---GHTSLTSGMQLR-GN 474
Query: 331 RRLLASASDDGMIKIWEL 348
+L S + D +++W++
Sbjct: 475 --ILVSCNADSHVRVWDI 490
Score = 81 (33.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA 337
R I+ S AD V+ + D+ +G ML H + S+QW G R ++A++
Sbjct: 472 RGNILVSCNADSHVRVW-----DIHEGTCVHML----SGHRSAITSLQWF-G-RNMVATS 520
Query: 338 SDDGMIKIWEL 348
SDDG +K+W++
Sbjct: 521 SDDGTVKLWDI 531
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/232 (28%), Positives = 110/232 (47%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ + S D T+R+W+ + A L H VR + G + + +D T I
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHL----ATLHGHHA-AVRCVQFD--GTTVVSGGYDFTVKI 402
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W G C+ TL GH N V S+ + + +++ + D S+ +W+ ECV++LQ
Sbjct: 403 WNAHTG--RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
GH +Q ++L SC+ D+ ++VW D CV +S GH S I +L
Sbjct: 461 GHTSLTSGMQLRG--NILVSCNADSHVRVW-----DIHEGTCVHMLS----GHRSAITSL 509
Query: 221 SFNAKGDKLVSCSDDLTIKIW----GA---DITRMQSG-DGYASWRHLCTIS 264
+ + + + + SDD T+K+W GA D+ + SG +G WR LC+ S
Sbjct: 510 QWFGR-NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWR-LCSTS 559
Score = 140 (54.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 46 SGDKTVRIWEQSASSRFWNCKAVLEEM----HTRTVRSCAWSPSGKLLATASFDATTCIW 101
+ DK+ R + WN ++ H V +C +L T S D T +W
Sbjct: 224 AADKS-RYLRADKIEKNWNANPIMGSAVLRGHEDHVITCM-QIHDDVLVTGSDDNTLKVW 281
Query: 102 -EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
D G E + TL GH V + + G + + D++V +W + G+ + LQ
Sbjct: 282 CIDKG---EVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS---LLHTLQ 335
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
GH V+ + + +L + S D T++VW D +S H + T+ +GH + + +
Sbjct: 336 GHTSTVRCMAMAGS--ILVTGSRDTTLRVW---DVESGR-H-LATL----HGHHAAVRCV 384
Query: 221 SFNAKGDKLVSCSDDLTIKIWGADITR 247
F+ G +VS D T+KIW A R
Sbjct: 385 QFD--GTTVVSGGYDFTVKIWNAHTGR 409
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSG--DKTVRIWEQSASSRFWNCKAVL 69
R I+TL GH +RV+SL ++ + CSG D ++R+W+ + C A+L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSI--------VCSGSLDTSIRVWDFTRPEG-QECVALL 459
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ HT + G +L + + D+ +W+ G CV L GH + + S+ W
Sbjct: 460 QG-HTSL--TSGMQLRGNILVSCNADSHVRVWDIHEGT--CVHMLSGHRSAITSLQWFGR 514
Query: 130 GTLLATCGRDKSVWIWEVMPG 150
++AT D +V +W++ G
Sbjct: 515 N-MVATSSDDGTVKLWDIERG 534
Score = 119 (46.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TL GHT VW T+ + S S D+TV++W S + HT
Sbjct: 291 TLVGHTGGVW------TSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQG-----HTS 339
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
TVR A + G +L T S D T +W+ G + +ATL GH V+ V ++ +
Sbjct: 340 TVRCMAMA--GSILVTGSRDTTLRVWDVESGRH--LATLHGHHAAVRCVQFDGT 389
Score = 107 (42.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 34/111 (30%), Positives = 53/111 (47%)
Query: 157 SVLQGHAQDV-KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
+VL+GH V +Q H DVL + S DNT+KVW D + T+ GH+
Sbjct: 249 AVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCI-----DKGEVMYTLV----GHTG 297
Query: 216 TIWALSFNAKGDKLVSCSDDLTIKIWGA-DITRMQSGDGYASWRHLCTISG 265
+W + G +VS S D T+K+W D + + + G+ S ++G
Sbjct: 298 GVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG 348
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 33/138 (23%), Positives = 66/138 (47%)
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT 270
+GH + + + F+ G +VS D T+KIW A +G R + T++G+++R
Sbjct: 375 HGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNA-----HTG------RCIRTLTGHNNRV 421
Query: 271 IFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330
+ S I+ SG+ D S++ + ++ + G LL+ H + +Q G
Sbjct: 422 YSLLFESERSIVCSGSLDTSIRVWDFTRPE---GQECVALLQ---GHTSLTSGMQLR-GN 474
Query: 331 RRLLASASDDGMIKIWEL 348
+L S + D +++W++
Sbjct: 475 --ILVSCNADSHVRVWDI 490
Score = 81 (33.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA 337
R I+ S AD V+ + D+ +G ML H + S+QW G R ++A++
Sbjct: 472 RGNILVSCNADSHVRVW-----DIHEGTCVHML----SGHRSAITSLQWF-G-RNMVATS 520
Query: 338 SDDGMIKIWEL 348
SDDG +K+W++
Sbjct: 521 SDDGTVKLWDI 531
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 218 (81.8 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 72/267 (26%), Positives = 122/267 (45%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECV 156
D G+ L GH+ E +SWN SG LL+ D ++ +W++ +P G
Sbjct: 162 DPSGECNSDLHLRGHQKEGYGLSWNPYLSGYLLSASD-DHTICLWDISAVPKEGKVVGAK 220
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
++ GH V+ V WH + LF S + D + +W DT S+N S S + +++
Sbjct: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHSVDAYTA 274
Query: 216 TIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + L S S D T+ +W D+ ++ L + + D IF V
Sbjct: 275 EVNCLSFNPNSEFILASGSPDKTVALW--DLRNLKL--------KLHSFESHKDE-IFQV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
WS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D ++++W++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQVWQMAENI 408
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 55/238 (23%), Positives = 103/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ SA + K + H
Sbjct: 173 LRGHQKEGYGLSWNPY--LSGY---LLSASDDHTICLWDISAVPKEGKVVGAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNASGT 131
T V +W + L + + D IW+ + + +++ + EV +S+N +
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSE 286
Query: 132 -LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LA+ DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILASGSPDKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 62/251 (24%), Positives = 108/251 (43%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN---EFECVSVL--QG 161
+ E EG N + + N T D V+ + P EC S L +G
Sbjct: 116 EIEIKINYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRG 175
Query: 162 HAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
H ++ + W+P + L S S D+TI +W + V GH++ + +
Sbjct: 176 HQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGK--VVGAKTIFTGHTAVVEDV 233
Query: 221 SFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH-DRTIFSVHWSR 278
S++ + L S +DD + IW TR + + H ++ Y + S + +
Sbjct: 234 SWHLLHESLFGSVADDQKLMIWD---TR---SNNTSKPSH--SVDAYTAEVNCLSFNPNS 285
Query: 279 EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 338
E I+ASG+ D +V + DL + K+ L ++H ++ VQWSP +LAS+
Sbjct: 286 EFILASGSPDKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 337
Query: 339 DDGMIKIWELA 349
D + +W+L+
Sbjct: 338 TDRRLNVWDLS 348
Score = 132 (51.5 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 54/232 (23%), Positives = 99/232 (42%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE--DVGGDYECVAT---LEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ V + + V GH V+ VS
Sbjct: 176 HQKEGYGLSWNPYLSGYLLS-ASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + + +V + ++P + +L S S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSP 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 216 (81.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 66/222 (29%), Positives = 104/222 (46%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH D V + + P+ + AS S DKTVRIW + ++ + HT TVR
Sbjct: 21 GHKDAVTCVNFSPSGHL------LASGSRDKTVRIWVPNVKG-----ESTVFRAHTATVR 69
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S + G+ TAS D T +W + + +L H N V+ ++ G L+ +
Sbjct: 70 SVHFCSDGQSFVTASDDKTVKVWATHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASD 127
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
DK+V +W+ + ECV H V V +HP+ + + DNT+KVW D +
Sbjct: 128 DKTVKLWDK---SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW---DVRT- 180
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
H + + HS+ + LSF+ G+ L++ S D T+KI
Sbjct: 181 --H---RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 199 (75.1 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 54/211 (25%), Positives = 95/211 (45%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101
F + S DKTV++W ++ H VR +SP G+L+ +AS D T +W
Sbjct: 80 FVTASDDKTVKVWATHRQKFLFSLS-----QHINWVRCAKFSPDGRLIVSASDDKTVKLW 134
Query: 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
+ ECV + H V V ++ SGT +A G D +V +W+V + Q
Sbjct: 135 DK--SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV---RTHRLLQHYQL 189
Query: 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 221
H+ V + +HP+ + L + S D+T+K+ D + T+ +GH ++
Sbjct: 190 HSAAVNGLSFHPSGNYLITASSDSTLKI-----LDLMEGRLLYTL----HGHQGPATTVA 240
Query: 222 FNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
F+ G+ S D + +W ++ + G+
Sbjct: 241 FSRTGEYFASGGSDEQVMVWKSNFDIVDHGE 271
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 116 GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175
GH++ V V+++ SG LLA+ RDK+V IW +P + E +V + H V+ V +
Sbjct: 21 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW--VPNVKGES-TVFRAHTATVRSVHFCSDG 77
Query: 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235
+ S D T+KVW T + + ++S+ H + + F+ G +VS SDD
Sbjct: 78 QSFVTASDDKTVKVW---ATHRQKF--LFSLSQ----HINWVRCAKFSPDGRLIVSASDD 128
Query: 236 LTIKIW 241
T+K+W
Sbjct: 129 KTVKLW 134
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 199 (75.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 73/244 (29%), Positives = 111/244 (45%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GK-LLATASFDATTCI 100
A+CS DK V+IW +SR C V EE HT V C ++ G+ LLAT S D +
Sbjct: 672 ATCSADKKVKIW----NSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKL 726
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W D+ Y C T+ GH N V ++ + +A+C D +V +W V NE + +
Sbjct: 727 W-DLKDKY-CRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKD 784
Query: 161 -----GHAQD-----VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
QD VK W + D + + N + ++ D + N IS
Sbjct: 785 FFRNADEQQDDVEVLVKCCSWSRSSDTILVVA-KNKLLLF---DVTTSNLLTQVIIS--- 837
Query: 211 NGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGA-DITRMQSGDGYASWRHLCTISGYHD 268
H STI F A GD+LV+ + +I++W ++++ G+ SW H T S D
Sbjct: 838 --HHSTIQYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSS--D 892
Query: 269 RTIF 272
++F
Sbjct: 893 GSLF 896
Score = 183 (69.5 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 45/150 (30%), Positives = 72/150 (48%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
ASC DKT+++++ + R A H + C +S K +AT S D IW
Sbjct: 630 ASCGADKTLQVFKAESGERLLEISA-----HDDEILCCTFSADDKYVATCSADKKVKIWN 684
Query: 103 DVGGDYECVATLEGHENEVKSVSWN-ASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
G +C+ E H +V +N G LLATC D + +W++ +++ C + +
Sbjct: 685 SRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLK--DKY-CRNTMF 739
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
GH V ++ P D + SCS D T+K+W
Sbjct: 740 GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 769
Score = 170 (64.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 47/180 (26%), Positives = 83/180 (46%)
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
N ++ H V +S + +A+ D T +++ G E + + H++E+
Sbjct: 604 NLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESG--ERLLEISAHDDEILC 661
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSC 181
+++A +ATC DK V IW G +C+ V + H + V Q++ +L +C
Sbjct: 662 CTFSADDKYVATCSADKKVKIWNSRTG---KCLYVYEEHTEQVNCCQFNNRRGQYLLATC 718
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D IK+W +D +C T+ GH + + F+ D + SCS D T+K+W
Sbjct: 719 SDDTYIKLWDLKDK-----YCRNTMF----GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 769
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/155 (29%), Positives = 72/155 (46%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA--SSRFWNC 65
N++L E L+GH + + A+ + + S S D TV++W + + + + C
Sbjct: 1033 NWQLNECVFLKGHKEAIKDFAFLENSKL-------LSWSFDGTVKVWNITTGKTEKDFAC 1085
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
H V SCA SP G ++ S D T IW + L+GHE V+ +
Sbjct: 1086 -------HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSV--LHELKGHEACVRCSA 1136
Query: 126 WNASGTLLATCGRDKS-VWIWEVMPGNEFE-CVSV 158
++ S LLAT G DK + IW+++ G C SV
Sbjct: 1137 FSPSNKLLAT-GDDKGDIRIWDILTGELLHFCSSV 1170
Score = 129 (50.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 47/209 (22%), Positives = 95/209 (45%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ A+CS D +++W+ ++ C+ + H V C +SP+ +A+ S D T +
Sbjct: 714 LLATCSDDTYIKLWD--LKDKY--CRNTMFG-HVNAVSHCRFSPNDDYIASCSTDGTVKL 768
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASG------TLLATCGRDKSVWIWEVMPGNEFE 154
W +V E + T+E +K NA L+ C +S V+ N+
Sbjct: 769 W-NVHSANE-LRTIE-----IKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLL 821
Query: 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNN--G 212
V + ++ H T+ C+ D + V + + W+ ++++S+ + G
Sbjct: 822 LFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSH-CSIELWN-IKSLSKVADCRG 879
Query: 213 HSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
H+S + ++F++ G ++ S+D TI+IW
Sbjct: 880 HTSWVHCVTFSSDGSLFLTSSEDQTIRIW 908
Score = 122 (48.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 54/212 (25%), Positives = 87/212 (41%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
S + D +++W + C V + H ++ A+ + KLL+ SFD T +W
Sbjct: 1022 SSAHDAVIQVWNWQLNE----C--VFLKGHKEAIKDFAFLENSKLLSW-SFDGTVKVWNI 1074
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL---Q 160
G E H V S + + G+ ++ DK+ IW FE SVL +
Sbjct: 1075 TTGKTE--KDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWS------FESSSVLHELK 1126
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH-CVQ-TISESNNGHSSTIW 218
GH V+ + P+ +L + I++W + + H C T+ E H +
Sbjct: 1127 GHEACVRCSAFSPSNKLLATGDDKGDIRIW--DILTGELLHFCSSVTVDEEEPTHGGWVT 1184
Query: 219 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250
LSF+ LVS L K W D+T +S
Sbjct: 1185 DLSFSPDSKMLVSSGGYL--KWW--DVTTGES 1212
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 51/167 (30%), Positives = 74/167 (44%)
Query: 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTV 77
H V S A P DG F+S S DKT +IW +SS VL E+ H V
Sbjct: 1086 HRGAVLSCAVSP----DGSR--FSSTSADKTAKIWSFESSS-------VLHELKGHEACV 1132
Query: 78 RSCAWSPSGKLLATASFDATTCIWEDVGGD--YECVA-TLEG----HENEVKSVSWNASG 130
R A+SPS KLLAT IW+ + G+ + C + T++ H V +S++
Sbjct: 1133 RCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDS 1192
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177
+L + G W W+V G E + + ++K + P DV
Sbjct: 1193 KMLVSSGGYLK-W-WDVTTG---ESLQTFYTNGTNLKSIHVSPNFDV 1234
Score = 74 (31.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 272 FSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKM--LLKKEKAHDMDVNSVQWSPG 329
F+ H R +++ + D +F S D S++ +L + K H+ V +SP
Sbjct: 1083 FACH--RGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPS 1140
Query: 330 ERRLLASASDDGMIKIWEL 348
+ LLA+ D G I+IW++
Sbjct: 1141 NK-LLATGDDKGDIRIWDI 1158
Score = 56 (24.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE 55
L ++ GHT V + T DG +F + S D+T+RIWE
Sbjct: 871 LSKVADCRGHTSWVHCV----TFSSDG--SLFLTSSEDQTIRIWE 909
Score = 46 (21.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 315 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+ H V+ V +S + L ++S+D I+IWE
Sbjct: 878 RGHTSWVHCVTFS-SDGSLFLTSSEDQTIRIWE 909
Score = 42 (19.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 330 ERRLLASASDDGMIKIWEL 348
E L S S DG +K+W +
Sbjct: 1056 ENSKLLSWSFDGTVKVWNI 1074
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 199 (75.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 73/244 (29%), Positives = 111/244 (45%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GK-LLATASFDATTCI 100
A+CS DK V+IW +SR C V EE HT V C ++ G+ LLAT S D +
Sbjct: 673 ATCSADKKVKIW----NSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKL 727
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W D+ Y C T+ GH N V ++ + +A+C D +V +W V NE + +
Sbjct: 728 W-DLKDKY-CRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKD 785
Query: 161 -----GHAQD-----VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
QD VK W + D + + N + ++ D + N IS
Sbjct: 786 FFRNADEQQDDVEVLVKCCSWSRSSDTILVVA-KNKLLLF---DVTTSNLLTQVIIS--- 838
Query: 211 NGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGA-DITRMQSGDGYASWRHLCTISGYHD 268
H STI F A GD+LV+ + +I++W ++++ G+ SW H T S D
Sbjct: 839 --HHSTIQYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSS--D 893
Query: 269 RTIF 272
++F
Sbjct: 894 GSLF 897
Score = 183 (69.5 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 45/150 (30%), Positives = 72/150 (48%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
ASC DKT+++++ + R A H + C +S K +AT S D IW
Sbjct: 631 ASCGADKTLQVFKAESGERLLEISA-----HDDEILCCTFSADDKYVATCSADKKVKIWN 685
Query: 103 DVGGDYECVATLEGHENEVKSVSWN-ASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
G +C+ E H +V +N G LLATC D + +W++ +++ C + +
Sbjct: 686 SRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLK--DKY-CRNTMF 740
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
GH V ++ P D + SCS D T+K+W
Sbjct: 741 GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 770
Score = 170 (64.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 47/180 (26%), Positives = 83/180 (46%)
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
N ++ H V +S + +A+ D T +++ G E + + H++E+
Sbjct: 605 NLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESG--ERLLEISAHDDEILC 662
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSC 181
+++A +ATC DK V IW G +C+ V + H + V Q++ +L +C
Sbjct: 663 CTFSADDKYVATCSADKKVKIWNSRTG---KCLYVYEEHTEQVNCCQFNNRRGQYLLATC 719
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D IK+W +D +C T+ GH + + F+ D + SCS D T+K+W
Sbjct: 720 SDDTYIKLWDLKDK-----YCRNTMF----GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 770
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/155 (29%), Positives = 72/155 (46%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA--SSRFWNC 65
N++L E L+GH + + A+ + + S S D TV++W + + + + C
Sbjct: 1034 NWQLNECVFLKGHKEAIKDFAFLENSKL-------LSWSFDGTVKVWNITTGKTEKDFAC 1086
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
H V SCA SP G ++ S D T IW + L+GHE V+ +
Sbjct: 1087 -------HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSV--LHELKGHEACVRCSA 1137
Query: 126 WNASGTLLATCGRDKS-VWIWEVMPGNEFE-CVSV 158
++ S LLAT G DK + IW+++ G C SV
Sbjct: 1138 FSPSNKLLAT-GDDKGDIRIWDILTGELLHFCSSV 1171
Score = 129 (50.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 47/209 (22%), Positives = 95/209 (45%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ A+CS D +++W+ ++ C+ + H V C +SP+ +A+ S D T +
Sbjct: 715 LLATCSDDTYIKLWD--LKDKY--CRNTMFG-HVNAVSHCRFSPNDDYIASCSTDGTVKL 769
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASG------TLLATCGRDKSVWIWEVMPGNEFE 154
W +V E + T+E +K NA L+ C +S V+ N+
Sbjct: 770 W-NVHSANE-LRTIE-----IKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLL 822
Query: 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNN--G 212
V + ++ H T+ C+ D + V + + W+ ++++S+ + G
Sbjct: 823 LFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSH-CSIELWN-IKSLSKVADCRG 880
Query: 213 HSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
H+S + ++F++ G ++ S+D TI+IW
Sbjct: 881 HTSWVHCVTFSSDGSLFLTSSEDQTIRIW 909
Score = 122 (48.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 54/212 (25%), Positives = 87/212 (41%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
S + D +++W + C V + H ++ A+ + KLL+ SFD T +W
Sbjct: 1023 SSAHDAVIQVWNWQLNE----C--VFLKGHKEAIKDFAFLENSKLLSW-SFDGTVKVWNI 1075
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL---Q 160
G E H V S + + G+ ++ DK+ IW FE SVL +
Sbjct: 1076 TTGKTE--KDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWS------FESSSVLHELK 1127
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH-CVQ-TISESNNGHSSTIW 218
GH V+ + P+ +L + I++W + + H C T+ E H +
Sbjct: 1128 GHEACVRCSAFSPSNKLLATGDDKGDIRIW--DILTGELLHFCSSVTVDEEEPTHGGWVT 1185
Query: 219 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250
LSF+ LVS L K W D+T +S
Sbjct: 1186 DLSFSPDSKMLVSSGGYL--KWW--DVTTGES 1213
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 51/167 (30%), Positives = 74/167 (44%)
Query: 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTV 77
H V S A P DG F+S S DKT +IW +SS VL E+ H V
Sbjct: 1087 HRGAVLSCAVSP----DGSR--FSSTSADKTAKIWSFESSS-------VLHELKGHEACV 1133
Query: 78 RSCAWSPSGKLLATASFDATTCIWEDVGGD--YECVA-TLEG----HENEVKSVSWNASG 130
R A+SPS KLLAT IW+ + G+ + C + T++ H V +S++
Sbjct: 1134 RCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDS 1193
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177
+L + G W W+V G E + + ++K + P DV
Sbjct: 1194 KMLVSSGGYLK-W-WDVTTG---ESLQTFYTNGTNLKSIHVSPNFDV 1235
Score = 74 (31.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 272 FSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKM--LLKKEKAHDMDVNSVQWSPG 329
F+ H R +++ + D +F S D S++ +L + K H+ V +SP
Sbjct: 1084 FACH--RGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPS 1141
Query: 330 ERRLLASASDDGMIKIWEL 348
+ LLA+ D G I+IW++
Sbjct: 1142 NK-LLATGDDKGDIRIWDI 1159
Score = 56 (24.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE 55
L ++ GHT V + T DG +F + S D+T+RIWE
Sbjct: 872 LSKVADCRGHTSWVHCV----TFSSDG--SLFLTSSEDQTIRIWE 910
Score = 46 (21.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 315 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+ H V+ V +S + L ++S+D I+IWE
Sbjct: 879 RGHTSWVHCVTFS-SDGSLFLTSSEDQTIRIWE 910
Score = 42 (19.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 330 ERRLLASASDDGMIKIWEL 348
E L S S DG +K+W +
Sbjct: 1057 ENSKLLSWSFDGTVKVWNI 1075
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 218 (81.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 70/263 (26%), Positives = 123/263 (46%)
Query: 109 ECVATLE--GHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV--MP--GNEFECVSVLQ 160
EC L GH+ E +SWN SG LL+ D ++ +W++ +P G + ++
Sbjct: 166 ECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASD-DHTICLWDISTVPKEGKIVDAKTIFT 224
Query: 161 GHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 219
GH V+ V WH + LF S + D + +W DT S+N S + + H++ +
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIW---DTRSNN---TSKPSHAVDAHTAEVNC 278
Query: 220 LSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS- 277
LSFN + +++ S D T+ +W D+ ++ L + + D IF V WS
Sbjct: 279 LSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQVQWSP 327
Query: 278 -REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329
E I+AS D + + SK +D DGP + + H ++ W+P
Sbjct: 328 HNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFSWNPN 385
Query: 330 ERRLLASASDDGMIKIWELANTL 352
E ++ S S+D ++++W++A +
Sbjct: 386 EPWVICSVSEDNIMQVWQMAENI 408
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 52/195 (26%), Positives = 92/195 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V ++W +F S + D+ + IW+ +++ AV + HT V
Sbjct: 225 GHTAVVEDVSWHLLH-----ESLFGSVADDQKLMIWDTRSNNTSKPSHAV--DAHTAEVN 277
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 278 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P V+ S S D
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 397 NIMQVWQMAENIYND 411
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/238 (23%), Positives = 102/238 (42%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMH 73
L GH + L+W P + G S S D T+ +W+ S + + K + H
Sbjct: 173 LRGHQKEGYGLSWNPN--LSGC---LLSASDDHTICLWDISTVPKEGKIVDAKTIFTG-H 226
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V +W + L + + D IW+ + + ++ H EV +S+N S
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSE 286
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 287 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 144 (55.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVM-----PGNEFECVS 157
V G E + HE EV + ++AT V +++ P EC
Sbjct: 111 VSGKIEIEIKIN-HEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTP 169
Query: 158 VLQ--GHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+ GH ++ + W+P + L S S D+TI +W + + GH+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGK--IVDAKTIFTGHT 227
Query: 215 STIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273
+ + +S++ + L S +DD + IW + S +A H ++ S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHAVDAHTAEVN------CLS 280
Query: 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+ E I+A+G+AD +V + DL + K+ L ++H ++ VQWSP +
Sbjct: 281 FNPYSEFILATGSADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 332
Query: 334 LASASDDGMIKIWELA 349
LAS+ D + +W+L+
Sbjct: 333 LASSGTDRRLNVWDLS 348
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVS 125
H + +W+P SG LL+ AS D T C+W+ G + GH V+ VS
Sbjct: 176 HQKEGYGLSWNPNLSGCLLS-ASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVS 234
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSA 294
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG 242
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 295 DKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 243 -ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 211 (79.3 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 69/241 (28%), Positives = 114/241 (47%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
Q L GHTD V +L V +FASC+ D+++R+W + S C A HT
Sbjct: 370 QILHGHTDIVLAL------DVFRKGRLFASCAKDQSIRVWRMNKSGEV-ACVAQ-GSGHT 421
Query: 75 RTVRS-CAWSPSGKLLATASFDATTCIW---EDV--------GGDY--ECVATLEGHENE 120
+V + C L T S D T +W E + GG + AT H+ +
Sbjct: 422 HSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKD 481
Query: 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180
+ SV+ + LLAT +D++ +W +P + + GH + + VQ+ P VL +
Sbjct: 482 INSVAVAPNDKLLATGSQDRTAKLW-ALP--RCQLLGTFSGHRRGLWCVQFSPMDQVLAT 538
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
S D TIK+W +D + C++T GH +++ ++F ++G +L+S D +K+
Sbjct: 539 ASADGTIKLWALQD-----FSCLKTFE----GHDASVLKVAFVSRGTQLLSSGSDGLLKL 589
Query: 241 W 241
W
Sbjct: 590 W 590
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 47/186 (25%), Positives = 84/186 (45%)
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H + + S A +P+ KLLAT S D T +W + + T GH + V ++
Sbjct: 475 QHCHDKDINSVAVAPNDKLLATGSQDRTAKLW--ALPRCQLLGTFSGHRRGLWCVQFSPM 532
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
+LAT D ++ +W + +F C+ +GH V V + L S D +K+
Sbjct: 533 DQVLATASADGTIKLWALQ---DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKL 589
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
W T +N CV+T+ + H +W L + D+ ++ + D + +W D+T +
Sbjct: 590 W----TIKNN-ECVRTL----DAHEDKVWGLHCSRLDDRALTGASDSRVVLW-KDVTEAE 639
Query: 250 SGDGYA 255
+ A
Sbjct: 640 QAEEQA 645
Score = 168 (64.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 64/246 (26%), Positives = 112/246 (45%)
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
L GH + V ++ G L A+C +D+S+ +W + E CV+ GH V +
Sbjct: 372 LHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSR 431
Query: 174 TMDV-LFSCSYDNTIKVW------WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
+ L + S D T+K+W ++ T + + + H I +++ A
Sbjct: 432 LKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAV-APN 490
Query: 227 DKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REGIIAS 284
DKL++ S D T K+W + R Q L T SG H R ++ V +S + ++A+
Sbjct: 491 DKLLATGSQDRTAKLWA--LPRCQL---------LGTFSG-HRRGLWCVQFSPMDQVLAT 538
Query: 285 GAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 344
+AD +++ + + D LK + HD V V + +LL+S SD G++K
Sbjct: 539 ASADGTIKLW--ALQDF-------SCLKTFEGHDASVLKVAFVSRGTQLLSSGSD-GLLK 588
Query: 345 IWELAN 350
+W + N
Sbjct: 589 LWTIKN 594
Score = 149 (57.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 49/165 (29%), Positives = 80/165 (48%)
Query: 38 VAP---VFASCSGDKTVRIWEQSASSRFWNCKAV-LEEMHTRTVRSCAWSPSGKLLATAS 93
VAP + A+ S D+T ++W A R C+ + H R + +SP ++LATAS
Sbjct: 487 VAPNDKLLATGSQDRTAKLW---ALPR---CQLLGTFSGHRRGLWCVQFSPMDQVLATAS 540
Query: 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153
D T +W D+ C+ T EGH+ V V++ + GT L + G D + +W + NE
Sbjct: 541 ADGTIKLW--ALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIK-NNE- 596
Query: 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
CV L H V + D + + D+ + V W + T+++
Sbjct: 597 -CVRTLDAHEDKVWGLHCSRLDDRALTGASDSRV-VLWKDVTEAE 639
Score = 134 (52.2 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
LE+ + + SP K+L TAS W G + H V +++++
Sbjct: 61 LEQEDQEDITAFDLSPDDKVLVTASRALLLAQWAWQEGSVTRLWKAI-HTAPVATMAFDP 119
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSV--LQGHAQDVKMVQWHPTMD--VLFSCSYD 184
+ TLLAT G D +V +W+V+ C +G V +V +HP +LFS + D
Sbjct: 120 TSTLLATGGCDGAVRVWDVV-----RCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAAD 174
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
+I+VW ++ C+ ++ H S + +L+F+A G ++S D IW D
Sbjct: 175 TSIRVWSLQERS-----CLAVLT----AHYSAVTSLTFSADGHTMLSSGRDKICVIW--D 223
Query: 245 ITRMQS 250
+ +Q+
Sbjct: 224 LRSLQA 229
Score = 102 (41.0 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 18 EGHTDRVW-SLAWKPTAGV--DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
EG R+W ++ P A + D + + A+ D VR+W+ + + +H
Sbjct: 97 EGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHL 156
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
P+ LL +++ D + +W + C+A L H + V S++++A G +
Sbjct: 157 VAFHP---DPARLLLFSSAADTSIRVWSLQ--ERSCLAVLTAHYSAVTSLTFSADGHTML 211
Query: 135 TCGRDKSVWIWEV 147
+ GRDK IW++
Sbjct: 212 SSGRDKICVIWDL 224
Score = 57 (25.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 261 CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319
C I H + ++ R+G + AS A D S++ + +K + + + H
Sbjct: 369 CQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEV------ACVAQGSGHTH 422
Query: 320 DVNSVQWSPGERRLLASASDDGMIKIWELANTL 352
V ++ S + L + S D +K+W L L
Sbjct: 423 SVGTICCSRLKETFLVTGSQDCTVKLWPLPEAL 455
Score = 47 (21.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
+LL +E A ++ V S G L +A D G +++WE A+
Sbjct: 243 VLLPEEPAPELGVKSA----GLHFL--TAGDQGALRVWEAAS 278
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 219 (82.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 66/213 (30%), Positives = 102/213 (47%)
Query: 63 WN-CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEV 121
W+ C LE H V S ++S +LLA+AS D T IW+ G + TLEGH + V
Sbjct: 285 WSPCLQALEG-HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQ--HTLEGHSDLV 341
Query: 122 KSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181
+SV ++ LLA+ D +V IW+ G+ L+GH V+ V + +L S
Sbjct: 342 RSVIFSHDSRLLASAS-DSTVKIWDTGTGS---LQHTLEGHRDWVRSVIFSHDSQLLASA 397
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D+T+K+W DT + + + + GH + ++ F+ L S SDD T+KIW
Sbjct: 398 SDDSTVKIW---DTGTGS------LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 448
Query: 242 GADITRMQSG-DGYASWRHLCTISGYHDRTIFS 273
+Q +G+ W S HD + +
Sbjct: 449 DTGTGSLQHTLEGHRDWVRSVIFS--HDSRLLA 479
Score = 218 (81.8 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 60/179 (33%), Positives = 93/179 (51%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
E H VRS +S +LLA+AS D+T IW+ G + TLEGH + V+SV ++
Sbjct: 376 EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQ--HTLEGHRDWVRSVIFSHDS 433
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
LLA+ D +V IW+ G+ L+GH V+ V + +L S S D T+++W
Sbjct: 434 QLLASASDDSTVKIWDTGTGS---LQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIW 490
Query: 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
DT+ + H + GHSS + ++SF+ L S S+D T++IW + +Q
Sbjct: 491 ---DTEKGS-H-----KHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQ 540
Score = 211 (79.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 61/177 (34%), Positives = 93/177 (52%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+Q LEGH V S+++ + + AS S D+TV+IW+ S + LE H
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRL------LASASDDRTVKIWDTETGS----LQHTLEG-H 337
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
+ VRS +S +LLA+AS D+T IW+ G + TLEGH + V+SV ++ LL
Sbjct: 338 SDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQ--HTLEGHRDWVRSVIFSHDSQLL 394
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
A+ D +V IW+ G+ L+GH V+ V + +L S S D+T+K+W
Sbjct: 395 ASASDDSTVKIWDTGTGS---LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 448
Score = 193 (73.0 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 75/271 (27%), Positives = 120/271 (44%)
Query: 103 DVGGDYE-CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161
DV + C+ LEGHE V SVS++ LLA+ D++V IW+ G+ L+G
Sbjct: 280 DVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGS---LQHTLEG 336
Query: 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 221
H+ V+ V + +L S S D+T+K+W DT + + + + GH + ++
Sbjct: 337 HSDLVRSVIFSHDSRLLASAS-DSTVKIW---DTGTGS------LQHTLEGHRDWVRSVI 386
Query: 222 FNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWSREG 280
F+ L S SDD T+KIW +Q +G+ W S HD + +
Sbjct: 387 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS--HDSQLLASASDDST 444
Query: 281 IIASGAADDSVQFFVESKDDLIDGPSYK---MLLKK------------EKA---HDMD-- 320
+ S+Q +E D + + LL EK H ++
Sbjct: 445 VKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGH 504
Query: 321 ---VNSVQWSPGERRLLASASDDGMIKIWEL 348
V SV +S + RLLASAS+D ++IW++
Sbjct: 505 SSLVTSVSFSH-DSRLLASASNDQTVRIWDI 534
Score = 180 (68.4 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 53/143 (37%), Positives = 75/143 (52%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
D G L+ TLEGH D V S+ + + + AS S D TV+IW+ S
Sbjct: 407 DTGTGSLQH--TLEGHRDWVRSVIFSHDS------QLLASASDDSTVKIWDTGTGS---- 454
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124
+ LE H VRS +S +LLA+AS D T IW+ G ++ TLEGH + V SV
Sbjct: 455 LQHTLEG-HRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHK--HTLEGHSSLVTSV 511
Query: 125 SWNASGTLLATCGRDKSVWIWEV 147
S++ LLA+ D++V IW++
Sbjct: 512 SFSHDSRLLASASNDQTVRIWDI 534
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 219 (82.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 75/275 (27%), Positives = 130/275 (47%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+RS +SP G LAT + D T +W D+ + T GHE ++ S+ +++ G + +
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVW-DIHTK-KIQHTFYGHELDIYSLDYSSDGRFIVSG 387
Query: 137 GRDKSVWIWEVMPGN-EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195
DK IW++ G F + G V V P ++ + S DN +++W
Sbjct: 388 SGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLW----- 442
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA 255
D+ + + E GH ++++++F+ G L S S D ++K+W +R +S
Sbjct: 443 DAQTGYFL----ERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRS----- 493
Query: 256 SWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKE 314
R T +G+ D + SV +S +G + SG+ D SVQF+ D +G ++ ML
Sbjct: 494 --RCRATFNGHKD-FVLSVAFSPDGSWLISGSKDRSVQFW-----DPRNGTTHMML---- 541
Query: 315 KAHDMDVNSVQWSP--GERRLLASASDDGMIKIWE 347
+ H V SV SP + A+ S D ++W+
Sbjct: 542 QGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 56/206 (27%), Positives = 91/206 (44%)
Query: 43 ASCSGDKTVRIWE---QSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
A+ + DKTV++W+ + F+ H + S +S G+ + + S D
Sbjct: 343 ATGAEDKTVKVWDIHTKKIQHTFYG--------HELDIYSLDYSSDGRFIVSGSGDKKAK 394
Query: 100 IWEDVGGDYECVATLEGHE----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
IW+ G +C TL E N V SV+ + G L+A D V +W+ G E
Sbjct: 395 IWDIEKG--KCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLER 452
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
+GH V V + P L S S D ++K+W + S + C T NGH
Sbjct: 453 Y---EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRS-RCRATF----NGHKD 504
Query: 216 TIWALSFNAKGDKLVSCSDDLTIKIW 241
+ +++F+ G L+S S D +++ W
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFW 530
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 53/153 (34%), Positives = 77/153 (50%)
Query: 31 PTAGVDGVA--P---VFASCSGDKTVRIWEQSASSRFWNCKAVLE--EMHTRTVRSCAWS 83
P GV VA P + A+ S D VR+W+ A + ++ LE E H +V S A+S
Sbjct: 414 PKNGVTSVAMSPDGRLVAAGSLDNIVRLWD--AQTGYF-----LERYEGHLDSVYSVAFS 466
Query: 84 PSGKLLATASFDATTCIWEDVGGDYE---CVATLEGHENEVKSVSWNASGTLLATCGRDK 140
P GK LA+ S D + +W D+ G C AT GH++ V SV+++ G+ L + +D+
Sbjct: 467 PDGKSLASGSLDKSLKLW-DLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDR 525
Query: 141 SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
SV W+ G +LQGH V V P
Sbjct: 526 SVQFWDPRNGTTH---MMLQGHKNSVISVALSP 555
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/136 (33%), Positives = 68/136 (50%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++ EGH D V+S+A+ P DG + AS S DK++++W+ S S C+A H
Sbjct: 450 LERYEGHLDSVYSVAFSP----DGKS--LASGSLDKSLKLWDLSGSRSRSRCRATFNG-H 502
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW---NASG 130
V S A+SP G L + S D + W+ G + L+GH+N V SV+ N S
Sbjct: 503 KDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMM--LQGHKNSVISVALSPKNNSH 560
Query: 131 TLLATCGRDKSVWIWE 146
+ AT D +W+
Sbjct: 561 GVFATGSGDFRSRLWK 576
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 221 (82.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 69/249 (27%), Positives = 124/249 (49%)
Query: 9 YELREI--QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
+EL+ + Q L GHTD V +L V +FASC+ D+++RIW + + + C
Sbjct: 362 FELQTLACQILHGHTDIVLAL------DVFRKGWLFASCAKDQSIRIWRMNKAGQV-ACV 414
Query: 67 AVLEEMHTRTVRS-CAWSPSGKLLATASFDATTCIW--------EDVGGDYECV-----A 112
A HT +V + C L T S D T +W ++ D + + +
Sbjct: 415 AQ-GSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQS 473
Query: 113 TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172
T H+ ++ S++ + + LLAT +D++ +W +P + + + V GH + + VQ+
Sbjct: 474 TQRCHDKDINSLAVSPNDKLLATGSQDRTAKLW-ALP--QCQLLGVFSGHRRGLWNVQFS 530
Query: 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232
PT VL + S D TIK+W +D + C++T GH +++ ++F ++G +L+S
Sbjct: 531 PTDQVLATASADGTIKLWALQD-----FSCLKTFE----GHDASVLKVAFVSRGAQLLSS 581
Query: 233 SDDLTIKIW 241
D +K+W
Sbjct: 582 GSDGLLKLW 590
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 48/186 (25%), Positives = 82/186 (44%)
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H + + S A SP+ KLLAT S D T +W + + GH + +V ++ +
Sbjct: 475 QRCHDKDINSLAVSPNDKLLATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWNVQFSPT 532
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
+LAT D ++ +W + +F C+ +GH V V + L S D +K+
Sbjct: 533 DQVLATASADGTIKLWALQ---DFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKL 589
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
W T N CV+T+ + H +W L + D ++ D I +W D+T +
Sbjct: 590 W----TIKSN-ECVRTL----DAHEDKVWGLHCSRLDDHAITGGSDSRIILW-KDVTEAE 639
Query: 250 SGDGYA 255
+ A
Sbjct: 640 QAEEQA 645
Score = 156 (60.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 60/243 (24%), Positives = 108/243 (44%)
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
L GH + V ++ G L A+C +D+S+ IW + + CV+ GH V +
Sbjct: 372 LHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICCSR 431
Query: 174 TMD-VLFSCSYDNTIKVWW------AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
+ L + S D T+K+W +++T SD + H I +L+ +
Sbjct: 432 LKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPND 491
Query: 227 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REGIIASG 285
L + S D T K+W ++ L SG H R +++V +S + ++A+
Sbjct: 492 KLLATGSQDRTAKLWALPQCQL-----------LGVFSG-HRRGLWNVQFSPTDQVLATA 539
Query: 286 AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKI 345
+AD +++ + + D LK + HD V V + +LL+S SD G++K+
Sbjct: 540 SADGTIKLW--ALQDF-------SCLKTFEGHDASVLKVAFVSRGAQLLSSGSD-GLLKL 589
Query: 346 WEL 348
W +
Sbjct: 590 WTI 592
Score = 147 (56.8 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 41/155 (26%), Positives = 73/155 (47%)
Query: 48 DKTVRIWEQSASSRFW---NCKAV-LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
DK + Q +++ W C+ + + H R + + +SP+ ++LATAS D T +W
Sbjct: 491 DKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKLW-- 548
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163
D+ C+ T EGH+ V V++ + G L + G D + +W + ECV L H
Sbjct: 549 ALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSN---ECVRTLDAHE 605
Query: 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
V + D + D+ I + W + T+++
Sbjct: 606 DKVWGLHCSRLDDHAITGGSDSRI-ILWKDVTEAE 639
Score = 140 (54.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 50/177 (28%), Positives = 83/177 (46%)
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG--HENEVKSVSW 126
LE+ + + SP ++L TAS W G VA L H V S+++
Sbjct: 61 LEQEDQEDITAFDLSPDDEVLVTASRALLLAQWAWREGT---VARLWKAIHTAPVASMAF 117
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP--TMDVLFSCSYD 184
+A+ TLLAT G D +V +W+++ + +G V +V +HP T +LFS + D
Sbjct: 118 DATSTLLATGGCDGAVRVWDIV---QHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVD 174
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+I+VW +D C+ ++ H S + +LSF+ G ++S D +W
Sbjct: 175 TSIRVWSLQDRS-----CLAVLT----AHYSAVTSLSFSEDGHTMLSSGRDKICIVW 222
Score = 105 (42.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 32/133 (24%), Positives = 60/133 (45%)
Query: 18 EGHTDRVW-SLAWKPTAGV--DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
EG R+W ++ P A + D + + A+ D VR+W+ + + +H
Sbjct: 97 EGTVARLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHL 156
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
P+ LL +++ D + +W D C+A L H + V S+S++ G +
Sbjct: 157 VAFHP---DPTRLLLFSSAVDTSIRVWSLQ--DRSCLAVLTAHYSAVTSLSFSEDGHTML 211
Query: 135 TCGRDKSVWIWEV 147
+ GRDK +W++
Sbjct: 212 SSGRDKICIVWDL 224
Score = 57 (25.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 261 CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319
C I H + ++ R+G + AS A D S++ + +K + + + H
Sbjct: 369 CQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQV------ACVAQGSGHTH 422
Query: 320 DVNSVQWSPGERRLLASASDDGMIKIWELANTL 352
V ++ S + L + S D +K+W L L
Sbjct: 423 SVGTICCSRLKESFLVTGSQDCTVKLWPLPEAL 455
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 216 (81.1 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 73/267 (27%), Positives = 123/267 (46%)
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPG-NEFECV--- 156
D G+ L GH+ E +SWN+ SG LL+ D +V +W++ G E + V
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAK 219
Query: 157 SVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215
+V GH+ V+ V WH + LF S + D + +W DT S+ S + H++
Sbjct: 220 AVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMW---DTRSNT---TSKPSHLVDAHTA 273
Query: 216 TIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+ LSFN + +++ S D T+ +W D+ ++ L T + D V
Sbjct: 274 EVNCLSFNPYSEFILATGSADKTVALW--DLRNLKL--------KLHTFESHKDEIFQVV 323
Query: 275 HWS--REGIIASGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
HWS E I+AS D + + SK +D DGP + + H ++
Sbjct: 324 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFS 381
Query: 326 WSPGERRLLASASDDGMIKIWELANTL 352
W+P E ++ S S+D +++IW++A +
Sbjct: 382 WNPNEPWVICSVSEDNIMQIWQMAENI 408
Score = 143 (55.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 59/239 (24%), Positives = 103/239 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---SRFWNCKAVLEEMH 73
L GH + L+W + + G S S D TV +W+ +A + + KAV H
Sbjct: 172 LRGHQKEGYGLSWN--SNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAVFTG-H 225
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA-SG 130
+ V AW + L + + D +W+ + L + H EV +S+N S
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV-KMVQWHPTMD-VLFSCSYDNTIK 188
+LAT DK+V +W++ N + + H ++ ++V W P + +L S D +
Sbjct: 286 FILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLN 343
Query: 189 VW-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
VW E + D + + GH++ I S+N ++ S S+D ++IW
Sbjct: 344 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 402
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 54/237 (22%), Positives = 98/237 (41%)
Query: 73 HTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYE-----CVATLEGHENEVKSVS 125
H + +W+ SG LL+ AS D T C+W+ G E A GH V+ V+
Sbjct: 175 HQKEGYGLSWNSNLSGHLLS-ASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVA 233
Query: 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSY 183
W+ +L + D+ + +W+ + ++ H +V + ++P + +L + S
Sbjct: 234 WHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW-ALSFNAKGDKLVSCSD-DLTIKIW 241
D T+ +W D N ES H I+ + ++ + +++ S D + +W
Sbjct: 294 DKTVALW-----DLRNLKLKLHTFES---HKDEIFQVVHWSPHNETILASSGTDRRLNVW 345
Query: 242 G-ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS--REGIIASGAADDSVQFF 294
+ I QS D L I G H I W+ +I S + D+ +Q +
Sbjct: 346 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 402
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 221 (82.9 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 64/216 (29%), Positives = 100/216 (46%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 136 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V V +HP + ++ + S
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCVSFHPELPIIITGSE 249
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 250 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 285
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 51/197 (25%), Positives = 92/197 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 155 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + +SF+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQTLE----GHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYR 262
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 263 LESTLNYGMERVWCVAS 279
Score = 136 (52.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V+S P+ + + ++ + C+W V T E + V++ + A + T
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHE--TQTLVKTFEVCDLPVRAAKFVARKNWVVTG 75
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D + ++ N E V + + H+ ++ + HPT + + S D IK+W D D
Sbjct: 76 ADDMQIRVFNY---NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW---DWD 129
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
W C Q GH+ + + N K ++ S S D TIK+W
Sbjct: 130 K-KWSCSQVFE----GHTHYVMQIVINPKDNNQFASASLDRTIKVW 170
Score = 59 (25.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 293 FFVESKDD-LIDGPSY--KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ + DD L+ Y K ++ + H +V+ V + P E ++ + S+DG ++IW
Sbjct: 201 YLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHP-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 211 (79.3 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 69/241 (28%), Positives = 114/241 (47%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
Q L GHTD V +L V +FASC+ D+++R+W + S C A HT
Sbjct: 370 QILHGHTDIVLAL------DVFRKGRLFASCAKDQSIRVWRMNKSGEV-ACVAQ-GSGHT 421
Query: 75 RTVRS-CAWSPSGKLLATASFDATTCIW---EDV--------GGDY--ECVATLEGHENE 120
+V + C L T S D T +W E + GG + AT H+ +
Sbjct: 422 HSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKD 481
Query: 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180
+ SV+ + LLAT +D++ +W +P + + GH + + VQ+ P VL +
Sbjct: 482 INSVAVAPNDKLLATGSQDRTAKLW-ALP--RCQLLGTFSGHRRGLWCVQFSPMDQVLAT 538
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
S D TIK+W +D + C++T GH +++ ++F ++G +L+S D +K+
Sbjct: 539 ASADGTIKLWALQD-----FSCLKTFE----GHDASVLKVAFVSRGTQLLSSGSDGLLKL 589
Query: 241 W 241
W
Sbjct: 590 W 590
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 47/186 (25%), Positives = 84/186 (45%)
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H + + S A +P+ KLLAT S D T +W + + T GH + V ++
Sbjct: 475 QRCHDKDINSVAVAPNDKLLATGSQDRTAKLW--ALPRCQLLGTFSGHRRGLWCVQFSPM 532
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
+LAT D ++ +W + +F C+ +GH V V + L S D +K+
Sbjct: 533 DQVLATASADGTIKLWALQ---DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKL 589
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
W T +N CV+T+ + H +W L + D+ ++ + D + +W D+T +
Sbjct: 590 W----TIKNN-ECVRTL----DAHEDKVWGLHCSRLDDRALTGASDSRVVLW-KDVTEAE 639
Query: 250 SGDGYA 255
+ A
Sbjct: 640 QAEEQA 645
Score = 167 (63.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 64/246 (26%), Positives = 111/246 (45%)
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
L GH + V ++ G L A+C +D+S+ +W + E CV+ GH V +
Sbjct: 372 LHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSR 431
Query: 174 TMDV-LFSCSYDNTIKVW------WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
+ L + S D T+K+W ++ T + + H I +++ A
Sbjct: 432 LKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAV-APN 490
Query: 227 DKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REGIIAS 284
DKL++ S D T K+W + R Q L T SG H R ++ V +S + ++A+
Sbjct: 491 DKLLATGSQDRTAKLWA--LPRCQL---------LGTFSG-HRRGLWCVQFSPMDQVLAT 538
Query: 285 GAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 344
+AD +++ + + D LK + HD V V + +LL+S SD G++K
Sbjct: 539 ASADGTIKLW--ALQDF-------SCLKTFEGHDASVLKVAFVSRGTQLLSSGSD-GLLK 588
Query: 345 IWELAN 350
+W + N
Sbjct: 589 LWTIKN 594
Score = 149 (57.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 49/165 (29%), Positives = 80/165 (48%)
Query: 38 VAP---VFASCSGDKTVRIWEQSASSRFWNCKAV-LEEMHTRTVRSCAWSPSGKLLATAS 93
VAP + A+ S D+T ++W A R C+ + H R + +SP ++LATAS
Sbjct: 487 VAPNDKLLATGSQDRTAKLW---ALPR---CQLLGTFSGHRRGLWCVQFSPMDQVLATAS 540
Query: 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153
D T +W D+ C+ T EGH+ V V++ + GT L + G D + +W + NE
Sbjct: 541 ADGTIKLW--ALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIK-NNE- 596
Query: 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
CV L H V + D + + D+ + V W + T+++
Sbjct: 597 -CVRTLDAHEDKVWGLHCSRLDDRALTGASDSRV-VLWKDVTEAE 639
Score = 134 (52.2 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
LE+ + + SP K+L TAS W G + H V +++++
Sbjct: 61 LEQEDQEDITAFDLSPDDKVLVTASRALLLAQWAWQEGSVTRLWKAI-HTAPVATMAFDP 119
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSV--LQGHAQDVKMVQWHPTMD--VLFSCSYD 184
+ TLLAT G D +V +W+V+ C +G V +V +HP +LFS + D
Sbjct: 120 TSTLLATGGCDGAVRVWDVV-----RCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAAD 174
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
+I+VW ++ C+ ++ H S + +L+F+A G ++S D IW D
Sbjct: 175 TSIRVWSLQERS-----CLAVLT----AHYSAVTSLTFSADGHTMLSSGRDKICVIW--D 223
Query: 245 ITRMQS 250
+ +Q+
Sbjct: 224 LRSLQA 229
Score = 102 (41.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 18 EGHTDRVW-SLAWKPTAGV--DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
EG R+W ++ P A + D + + A+ D VR+W+ + + +H
Sbjct: 97 EGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHL 156
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
P+ LL +++ D + +W + C+A L H + V S++++A G +
Sbjct: 157 VAFHP---DPARLLLFSSAADTSIRVWSLQ--ERSCLAVLTAHYSAVTSLTFSADGHTML 211
Query: 135 TCGRDKSVWIWEV 147
+ GRDK IW++
Sbjct: 212 SSGRDKICVIWDL 224
Score = 57 (25.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 261 CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319
C I H + ++ R+G + AS A D S++ + +K + + + H
Sbjct: 369 CQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEV------ACVAQGSGHTH 422
Query: 320 DVNSVQWSPGERRLLASASDDGMIKIWELANTL 352
V ++ S + L + S D +K+W L L
Sbjct: 423 SVGTICCSRLKETFLVTGSQDCTVKLWPLPEAL 455
Score = 47 (21.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350
+LL +E A ++ V S G L +A D G +++WE A+
Sbjct: 243 VLLPEEPAPELGVKSA----GLHFL--TAGDQGALRVWEAAS 278
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 217 (81.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 80/320 (25%), Positives = 149/320 (46%)
Query: 34 GVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93
G + VF +G+ ++ ++S++ + +++ R+V C +SP GKLLAT +
Sbjct: 218 GCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSV--C-FSPDGKLLATGA 274
Query: 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153
D IW D+ + L GHE ++ S+ + G L + D+SV IW++
Sbjct: 275 EDKLIRIW-DLSTK-RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCS 332
Query: 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI---SESN 210
+S+ G V V P ++ + S D T++VW DS V+ + +E+
Sbjct: 333 LTLSIEDG----VTTVAVSPDGKLIAAGSLDRTVRVW-----DSTTGFLVERLDSGNENG 383
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS--GYHD 268
NGH ++++++F+ G+++ S S D T+K+W + G + + C ++ G+ D
Sbjct: 384 NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE--------GKSDKKSTCEVTYIGHKD 435
Query: 269 RTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327
+ SV + + I SG+ D V F+ D P ++L+ + + V S
Sbjct: 436 -FVLSVCCTPDNEYILSGSKDRGVIFW----DQASGNPL--LMLQGHRNSVISVAVSLNS 488
Query: 328 PGERRLLASASDDGMIKIWE 347
G + A+ S D +IW+
Sbjct: 489 KGTEGIFATGSGDCKARIWK 508
Score = 179 (68.1 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 75/242 (30%), Positives = 109/242 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE- 70
R I+ L GH ++SL + P DG V S SGD++VRIW+ S C L
Sbjct: 288 RIIKILRGHEQDIYSLDFFP----DGDRLV--SGSGDRSVRIWDLRTSQ----CSLTLSI 337
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE-------GHENEVKS 123
E TV A SP GKL+A S D T +W+ G V L+ GHE+ V S
Sbjct: 338 EDGVTTV---AVSPDGKLIAAGSLDRTVRVWDSTTGFL--VERLDSGNENGNGHEDSVYS 392
Query: 124 VSWNASGTLLATCGRDKSVWIW--EVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181
V+++ +G +A+ D++V +W E + C GH V V P + + S
Sbjct: 393 VAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSG 452
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK--LVSCSDDLTIK 239
S D + ++W D S N + + N S A+S N+KG + + S D +
Sbjct: 453 SKDRGV-IFW--DQASGN--PLLMLQGHRNSVISV--AVSLNSKGTEGIFATGSGDCKAR 505
Query: 240 IW 241
IW
Sbjct: 506 IW 507
Score = 134 (52.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKP---TAGV-DGVAPVFASCSG--------D 48
++F DG+ R + + R+W L T + DGV V S G D
Sbjct: 303 LDFFPDGD---RLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLD 359
Query: 49 KTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWSPSGKLLATASFDATTCIWEDVG- 105
+TVR+W+ + + E H +V S A+S +G+ +A+ S D T +W G
Sbjct: 360 RTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGK 419
Query: 106 GDYE--CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163
D + C T GH++ V SV + + +D+ V W+ GN + +LQGH
Sbjct: 420 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP---LLMLQGHR 476
Query: 164 QDVKMV----QWHPTMDVLFSCSYDNTIKVW-WAE 193
V V T + + S D ++W W +
Sbjct: 477 NSVISVAVSLNSKGTEGIFATGSGDCKARIWKWTK 511
Score = 125 (49.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 65/249 (26%), Positives = 116/249 (46%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS-VLQGHAQD 165
D + V +L+ H + V V ++ G +AT G +K+ ++ V G E V+ ++ + +
Sbjct: 190 DIDMVHSLD-HSSVVCCVRFSRDGKFIAT-GCNKTTQVFNVTTG---ELVAKLIDESSNE 244
Query: 166 VKMVQWHPTMDVLFS--C-SYDNTIKVWWAEDTDSDNWHC-VQTISESNNGHSSTIWALS 221
K + D+ C S D + AED W + I + GH I++L
Sbjct: 245 NKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLD 304
Query: 222 FNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG- 280
F GD+LVS S D +++IW D+ Q C+++ + + +V S +G
Sbjct: 305 FFPDGDRLVSGSGDRSVRIW--DLRTSQ-----------CSLTLSIEDGVTTVAVSPDGK 351
Query: 281 IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASASD 339
+IA+G+ D +V+ + + L++ + H+ V SV +S GE+ +AS S
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGN--ENGNGHEDSVYSVAFSNNGEQ--IASGSL 407
Query: 340 DGMIKIWEL 348
D +K+W L
Sbjct: 408 DRTVKLWHL 416
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 217 (81.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 80/320 (25%), Positives = 149/320 (46%)
Query: 34 GVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93
G + VF +G+ ++ ++S++ + +++ R+V C +SP GKLLAT +
Sbjct: 218 GCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSV--C-FSPDGKLLATGA 274
Query: 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153
D IW D+ + L GHE ++ S+ + G L + D+SV IW++
Sbjct: 275 EDKLIRIW-DLSTK-RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCS 332
Query: 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI---SESN 210
+S+ G V V P ++ + S D T++VW DS V+ + +E+
Sbjct: 333 LTLSIEDG----VTTVAVSPDGKLIAAGSLDRTVRVW-----DSTTGFLVERLDSGNENG 383
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS--GYHD 268
NGH ++++++F+ G+++ S S D T+K+W + G + + C ++ G+ D
Sbjct: 384 NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE--------GKSDKKSTCEVTYIGHKD 435
Query: 269 RTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327
+ SV + + I SG+ D V F+ D P ++L+ + + V S
Sbjct: 436 -FVLSVCCTPDNEYILSGSKDRGVIFW----DQASGNPL--LMLQGHRNSVISVAVSLNS 488
Query: 328 PGERRLLASASDDGMIKIWE 347
G + A+ S D +IW+
Sbjct: 489 KGTEGIFATGSGDCKARIWK 508
Score = 179 (68.1 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 75/242 (30%), Positives = 109/242 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE- 70
R I+ L GH ++SL + P DG V S SGD++VRIW+ S C L
Sbjct: 288 RIIKILRGHEQDIYSLDFFP----DGDRLV--SGSGDRSVRIWDLRTSQ----CSLTLSI 337
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE-------GHENEVKS 123
E TV A SP GKL+A S D T +W+ G V L+ GHE+ V S
Sbjct: 338 EDGVTTV---AVSPDGKLIAAGSLDRTVRVWDSTTGFL--VERLDSGNENGNGHEDSVYS 392
Query: 124 VSWNASGTLLATCGRDKSVWIW--EVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181
V+++ +G +A+ D++V +W E + C GH V V P + + S
Sbjct: 393 VAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSG 452
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK--LVSCSDDLTIK 239
S D + ++W D S N + + N S A+S N+KG + + S D +
Sbjct: 453 SKDRGV-IFW--DQASGN--PLLMLQGHRNSVISV--AVSLNSKGTEGIFATGSGDCKAR 505
Query: 240 IW 241
IW
Sbjct: 506 IW 507
Score = 134 (52.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKP---TAGV-DGVAPVFASCSG--------D 48
++F DG+ R + + R+W L T + DGV V S G D
Sbjct: 303 LDFFPDGD---RLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLD 359
Query: 49 KTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWSPSGKLLATASFDATTCIWEDVG- 105
+TVR+W+ + + E H +V S A+S +G+ +A+ S D T +W G
Sbjct: 360 RTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGK 419
Query: 106 GDYE--CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163
D + C T GH++ V SV + + +D+ V W+ GN + +LQGH
Sbjct: 420 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP---LLMLQGHR 476
Query: 164 QDVKMV----QWHPTMDVLFSCSYDNTIKVW-WAE 193
V V T + + S D ++W W +
Sbjct: 477 NSVISVAVSLNSKGTEGIFATGSGDCKARIWKWTK 511
Score = 125 (49.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 65/249 (26%), Positives = 116/249 (46%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS-VLQGHAQD 165
D + V +L+ H + V V ++ G +AT G +K+ ++ V G E V+ ++ + +
Sbjct: 190 DIDMVHSLD-HSSVVCCVRFSRDGKFIAT-GCNKTTQVFNVTTG---ELVAKLIDESSNE 244
Query: 166 VKMVQWHPTMDVLFS--C-SYDNTIKVWWAEDTDSDNWHC-VQTISESNNGHSSTIWALS 221
K + D+ C S D + AED W + I + GH I++L
Sbjct: 245 NKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLD 304
Query: 222 FNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG- 280
F GD+LVS S D +++IW D+ Q C+++ + + +V S +G
Sbjct: 305 FFPDGDRLVSGSGDRSVRIW--DLRTSQ-----------CSLTLSIEDGVTTVAVSPDGK 351
Query: 281 IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASASD 339
+IA+G+ D +V+ + + L++ + H+ V SV +S GE+ +AS S
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGN--ENGNGHEDSVYSVAFSNNGEQ--IASGSL 407
Query: 340 DGMIKIWEL 348
D +K+W L
Sbjct: 408 DRTVKLWHL 416
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 215 (80.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 62/203 (30%), Positives = 98/203 (48%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT--TC 99
FA+ S D T R+W+ +R+ + VL H VR W P+ L+AT S D
Sbjct: 232 FATASDDGTARVWD---FARYTE-ERVLRG-HGAEVRCIDWHPTKGLIATGSRDTQQPVK 286
Query: 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159
IW+ G C+ATL+ H++ V +V +N +G L T GRD V ++++ E
Sbjct: 287 IWDPKSGS--CLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMR---TY 341
Query: 160 QGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218
+ H ++V + WHP + LF S D +I V+W D + + I + H IW
Sbjct: 342 RAHKKEVISLAWHPIHEGLFVSGGGDGSI-VYWMVDGEKE-------IGLLEHAHDQAIW 393
Query: 219 ALSFNAKGDKLVSCSDDLTIKIW 241
++ ++ G L + S+D K W
Sbjct: 394 SMKWHPLGHILATGSNDNNTKFW 416
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 58/203 (28%), Positives = 93/203 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + L GH V + W PT G+ +A S + V+IW+ + S C A L+E
Sbjct: 251 EERVLRGHGAEVRCIDWHPTKGL--IAT--GSRDTQQPVKIWDPKSGS----CLATLQE- 301
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT- 131
H +V + ++ +G L T D ++ D+ E + T H+ EV S++W+
Sbjct: 302 HKSSVMAVEFNKNGNWLLTGGRDHLVKMY-DIRMMKE-MRTYRAHKKEVISLAWHPIHEG 359
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L + G D S+ W M E E + H Q + ++WHP +L + S DN K +W
Sbjct: 360 LFVSGGGDGSIVYW--MVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTK-FW 416
Query: 192 AEDTDSDNWHCVQTISESNN-GH 213
A + D + +S +N GH
Sbjct: 417 ARNRPGDTVEDIFGLSNTNMIGH 439
Score = 169 (64.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 53/229 (23%), Positives = 106/229 (46%)
Query: 24 VWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS 83
V+S+ W P +G + +G+ T +W +A +N + +L+ H +R+ W+
Sbjct: 136 VYSVCWSP----EGKRLITGCQTGEFT--LWNGTA----FNFETILQA-HDSAIRALKWA 184
Query: 84 PSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSV 142
+ + L +A W+ + H++E ++ +++ + AT D +
Sbjct: 185 SNEQWLLSADQGGYVKYWQP---NMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTA 241
Query: 143 WIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNW 200
+W+ E VL+GH +V+ + WHPT ++ + S D +K+W D +
Sbjct: 242 RVWDFARYTEER---VLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIW-----DPKSG 293
Query: 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
C+ T+ E H S++ A+ FN G+ L++ D +K++ DI M+
Sbjct: 294 SCLATLQE----HKSSVMAVEFNKNGNWLLTGGRDHLVKMY--DIRMMK 336
Score = 99 (39.9 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 267 HDRTIFSVHWS--REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
H + + S+ W EG+ SG D S+ ++ ++DG LL E AHD + S+
Sbjct: 344 HKKEVISLAWHPIHEGLFVSGGGDGSIVYW------MVDGEKEIGLL--EHAHDQAIWSM 395
Query: 325 QWSPGERRLLASASDDGMIKIW 346
+W P +LA+ S+D K W
Sbjct: 396 KWHP-LGHILATGSNDNNTKFW 416
Score = 95 (38.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 33/139 (23%), Positives = 54/139 (38%)
Query: 109 ECVAT--LEGHENEVK----SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH 162
+C+ T + N+VK SV W+ G L T + +W G F ++LQ H
Sbjct: 118 DCILTKFIRTAMNKVKCPVYSVCWSPEGKRLITGCQTGEFTLWN---GTAFNFETILQAH 174
Query: 163 AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF 222
++ ++W L S +K W + +N H + I L+F
Sbjct: 175 DSAIRALKWASNEQWLLSADQGGYVKYW---QPNMNNAHMFSAHKDE------AIRGLAF 225
Query: 223 NAKGDKLVSCSDDLTIKIW 241
K + SDD T ++W
Sbjct: 226 APTDVKFATASDDGTARVW 244
Score = 65 (27.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 298 KDDLIDGPSYKML--LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+D L+ +M+ ++ +AH +V S+ W P L S DG I W
Sbjct: 323 RDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYW 373
Score = 61 (26.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 267 HDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298
HD+ I+S+ W G I+A+G+ D++ +F+ ++
Sbjct: 388 HDQAIWSMKWHPLGHILATGSNDNNTKFWARNR 420
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 214 (80.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 54/181 (29%), Positives = 91/181 (50%)
Query: 12 REIQTLEGHTDRVWS--LAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
R++ TL GH + S +W + + G S DKT +W+ ++ C A L
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTG--------SMDKTCMLWDATSGK----CVATL 299
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ SC + +GKL+ATAS D T ++ +C+ LEGHE E+ +S+N
Sbjct: 300 TGHDDEILDSC-FDYTGKLIATASADGTARVYNAT--TRKCITKLEGHEGEISKISFNPQ 356
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
G L T DK+ IW+V G +C+ VL+GH ++ ++ +++ + S DN+ ++
Sbjct: 357 GNRLLTGSSDKTARIWDVQTG---QCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRI 413
Query: 190 W 190
W
Sbjct: 414 W 414
Score = 206 (77.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 52/176 (29%), Positives = 89/176 (50%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-GT 131
H + + A + +G T S+D T +W+ G E + TLEGH N V ++++N G
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASG--EELHTLEGHRNVVYAIAFNNPYGD 148
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
+AT DK+ +W G +C +GH ++ + ++P V+ + S D T K+W
Sbjct: 149 KIATGSFDKTCKLWSAETG---KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLW- 204
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
D + V T++ GH + I +LSF+ GD++++ S D T+ +W A R
Sbjct: 205 ----DIQSGEEVVTLT----GHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGR 252
Score = 200 (75.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 65/225 (28%), Positives = 112/225 (49%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV--SWNASG 130
H + S ++ SG + T SFD T +W+ G V TL GH E+ S SW+ S
Sbjct: 218 HLAEIISLSFDTSGDRIITGSFDHTVVVWDASTG--RKVHTLIGHCAEISSALFSWDCS- 274
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L+ T DK+ +W+ G +CV+ L GH ++ + T ++ + S D T +V+
Sbjct: 275 -LILTGSMDKTCMLWDATSG---KCVATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
Query: 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250
++ C+ + GH I +SFN +G++L++ S D T +IW D+ Q+
Sbjct: 331 -----NATTRKCITKLE----GHEGEISKISFNPQGNRLLTGSSDKTARIW--DV---QT 376
Query: 251 GDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294
G + L + G+ D IFS ++ +G I+ +G+ D+S + +
Sbjct: 377 G------QCLQVLEGHTDE-IFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 197 (74.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 55/203 (27%), Positives = 96/203 (47%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS-PSGKLLATASFDATTCI 100
F + S D+T ++W+ ++ E H V + A++ P G +AT SFD T +
Sbjct: 107 FITGSYDRTCKVWDTASGEELHTL-----EGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W G +C T GH E+ +S+N T++AT D + +W++ G E V L
Sbjct: 162 WSAETG--KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEE---VVTLT 216
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
GH ++ + + + D + + S+D+T+ VW D+ V T+ GH + I +
Sbjct: 217 GHLAEIISLSFDTSGDRIITGSFDHTVVVW-----DASTGRKVHTLI----GHCAEISSA 267
Query: 221 SFNAKGDKLVSCSDDLTIKIWGA 243
F+ +++ S D T +W A
Sbjct: 268 LFSWDCSLILTGSMDKTCMLWDA 290
Score = 187 (70.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 50/178 (28%), Positives = 86/178 (48%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E+ TLEGH + V+++A+ G D +A + S DKT ++W + +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYG-DKIA----TGSFDKTCKLWSAETGKCYHTFRG----- 175
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
HT + +++P ++AT S D T +W+ G E V TL GH E+ S+S++ SG
Sbjct: 176 HTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG--EEVVTLTGHLAEIISLSFDTSGDR 233
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ T D +V +W+ G + V L GH ++ + ++ + S D T +W
Sbjct: 234 IITGSFDHTVVVWDASTGRK---VHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLW 288
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 45/152 (29%), Positives = 70/152 (46%)
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH- 172
L H + +V+ N +G+ T D++ +W+ G E L+GH V + ++
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELH---TLEGHRNVVYAIAFNN 144
Query: 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232
P D + + S+D T K+W AE C T GH++ I LSFN + + +
Sbjct: 145 PYGDKIATGSFDKTCKLWSAE-----TGKCYHTF----RGHTAEIVCLSFNPQSTVVATG 195
Query: 233 SDDLTIKIWGADITRMQSGDGYASWR-HLCTI 263
S D T K+W DI QSG+ + HL I
Sbjct: 196 SMDTTAKLW--DI---QSGEEVVTLTGHLAEI 222
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 219 (82.2 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 69/249 (27%), Positives = 122/249 (48%)
Query: 9 YELREI--QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
+EL+ + Q L GHTD V +L V +FASC+ D+++RIW+ + + + C
Sbjct: 362 FELQTLACQILHGHTDIVLAL------DVFRKGWLFASCAKDQSIRIWKMNKAGQV-ACV 414
Query: 67 AVLEEMHTRTVRS-CAWSPSGKLLATASFDATTCIW--------EDVGGD-----YECVA 112
A HT +V + C L T S D T +W + D +
Sbjct: 415 AQ-GSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQT 473
Query: 113 TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172
T H+ ++ S++ + + LLAT +D++ +W +P + + + V GH + + VQ+
Sbjct: 474 TRRCHDKDINSLAVSPNDKLLATGSQDRTAKLW-ALP--QCQLLGVFTGHRRGLWNVQFS 530
Query: 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232
PT VL + S D TIK+W +D + C++T GH +++ ++F ++G +L+S
Sbjct: 531 PTDQVLATASADGTIKLWALQD-----FSCLKTFE----GHDASVLKVAFVSRGSQLLSS 581
Query: 233 SDDLTIKIW 241
D +K+W
Sbjct: 582 GSDGLLKLW 590
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 48/183 (26%), Positives = 81/183 (44%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + + S A SP+ KLLAT S D T +W + + GH + +V ++ + +
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLW--ALPQCQLLGVFTGHRRGLWNVQFSPTDQV 535
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LAT D ++ +W + +F C+ +GH V V + L S D +K+W
Sbjct: 536 LATASADGTIKLWALQ---DFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLW-- 590
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
T N CV+T+ + H +W L + D ++ D I +W D+T + +
Sbjct: 591 --TIKSN-ECVRTL----DAHEDKVWGLHCSQLDDHAITGGSDSRIILW-KDVTEAEQAE 642
Query: 253 GYA 255
A
Sbjct: 643 EQA 645
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 59/243 (24%), Positives = 110/243 (45%)
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
L GH + V ++ G L A+C +D+S+ IW++ + CV+ GH V +
Sbjct: 372 LHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSR 431
Query: 174 TMD-VLFSCSYDNTIKVW------WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
+ L + S D T+K+W A+ T +D+ + + H I +L+ +
Sbjct: 432 LKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPND 491
Query: 227 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REGIIASG 285
L + S D T K+W ++ L +G H R +++V +S + ++A+
Sbjct: 492 KLLATGSQDRTAKLWALPQCQL-----------LGVFTG-HRRGLWNVQFSPTDQVLATA 539
Query: 286 AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKI 345
+AD +++ + + D LK + HD V V + +LL+S SD G++K+
Sbjct: 540 SADGTIKLW--ALQDF-------SCLKTFEGHDASVLKVAFVSRGSQLLSSGSD-GLLKL 589
Query: 346 WEL 348
W +
Sbjct: 590 WTI 592
Score = 149 (57.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 52/195 (26%), Positives = 88/195 (45%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
D G L+ T H + SLA P D + A+ S D+T ++W
Sbjct: 463 DSGPVLLQAQTTRRCHDKDINSLAVSPN---D---KLLATGSQDRTAKLWALP------Q 510
Query: 65 CKAV-LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
C+ + + H R + + +SP+ ++LATAS D T +W D+ C+ T EGH+ V
Sbjct: 511 CQLLGVFTGHRRGLWNVQFSPTDQVLATASADGTIKLW--ALQDFSCLKTFEGHDASVLK 568
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
V++ + G+ L + G D + +W + ECV L H V + D +
Sbjct: 569 VAFVSRGSQLLSSGSDGLLKLWTIKSN---ECVRTLDAHEDKVWGLHCSQLDDHAITGGS 625
Query: 184 DNTIKVWWAEDTDSD 198
D+ I + W + T+++
Sbjct: 626 DSRI-ILWKDVTEAE 639
Score = 139 (54.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 48/175 (27%), Positives = 81/175 (46%)
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
LE+ + S SP ++L TAS W G + H V S++++A
Sbjct: 61 LEQEDQEDITSFDLSPDDEVLVTASRALLLAQWAWREGTVTRLWKAI-HTAPVASMAFDA 119
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP--TMDVLFSCSYDNT 186
+ TLLAT G D +V +W+++ + +G V +V +HP T +LFS + D +
Sbjct: 120 TSTLLATGGCDGAVRVWDIV---QHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTS 176
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
I+VW +D C+ ++ H S + +LSF+ G ++S D +W
Sbjct: 177 IRVWSLQDRS-----CLAVLT----AHYSAVTSLSFSEGGHTMLSSGRDKICIVW 222
Score = 107 (42.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 34/146 (23%), Positives = 63/146 (43%)
Query: 18 EGHTDRVW-SLAWKPTAGV--DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
EG R+W ++ P A + D + + A+ D VR+W+ + + +H
Sbjct: 97 EGTVTRLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHL 156
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
P+ LL +++ D + +W D C+A L H + V S+S++ G +
Sbjct: 157 VAFHP---DPTRLLLFSSAVDTSIRVWSLQ--DRSCLAVLTAHYSAVTSLSFSEGGHTML 211
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVLQ 160
+ GRDK +W++ V V +
Sbjct: 212 SSGRDKICIVWDLQSYQTTRTVPVFE 237
Score = 58 (25.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 261 CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319
C I H + ++ R+G + AS A D S++ + +K + + + H
Sbjct: 369 CQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQV------ACVAQGSGHTH 422
Query: 320 DVNSVQWSPGERRLLASASDDGMIKIWELANTL 352
V ++ S + L + S D +K+W L L
Sbjct: 423 SVGTICCSRLKESFLVTGSQDCTVKLWPLPEAL 455
Score = 45 (20.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 336 SASDDGMIKIWELAN 350
+A D G++++WE A+
Sbjct: 264 TAGDQGILRVWEAAS 278
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 221 (82.9 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 71/223 (31%), Positives = 107/223 (47%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
S S D T+R+W+ S C VL H VR + GKL+ + ++D IW
Sbjct: 1090 SGSRDATLRVWDIEQGS----CLHVLVG-HLAAVRCVQYD--GKLIVSGAYDYMVKIWHP 1142
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163
EC+ TL+GH N V S+ ++ G + + D S+ +W+V GN C L GH
Sbjct: 1143 ER--QECLHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVETGN---CKHTLMGHQ 1195
Query: 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223
++ ++L S + D+T+KVW D C+QT+S N HS+ + L FN
Sbjct: 1196 SLTSGMELR--QNILVSGNADSTVKVW-----DITTGQCLQTLSGPNKHHSA-VTCLQFN 1247
Query: 224 AKGDKLVSCSDDLTIKIWGA---DITR----MQSG-DGYASWR 258
++ +V+ SDD T+K+W D R + SG G WR
Sbjct: 1248 SRF--VVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWR 1288
Score = 174 (66.3 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 62/215 (28%), Positives = 107/215 (49%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+R+ + L+GH D V + +G V S S D T+++W SA + C L
Sbjct: 984 VRKPKVLKGHDDHV--ITCLQFSGNRIV-----SGSDDNTLKVW--SAVNG--KCLRTLV 1032
Query: 71 EMHTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
HT V WS SG ++ + S D T +W+ G CV TL+GH + V+ + +
Sbjct: 1033 G-HTGGV----WSSQMSGNIIISGSTDRTLKVWDMDSG--ACVHTLQGHTSTVRCM--HL 1083
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188
G+ + + RD ++ +W++ G+ C+ VL GH V+ VQ+ + V S +YD +K
Sbjct: 1084 HGSKVVSGSRDATLRVWDIEQGS---CLHVLVGHLAAVRCVQYDGKLIV--SGAYDYMVK 1138
Query: 189 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223
+W E + C+ T+ GH++ +++L F+
Sbjct: 1139 IWHPERQE-----CLHTLQ----GHTNRVYSLQFD 1164
Score = 131 (51.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM--DVLFSCSYDNT 186
SG + + D ++ +W + G +C+ L GH V W M +++ S S D T
Sbjct: 1004 SGNRIVSGSDDNTLKVWSAVNG---KCLRTLVGHTGGV----WSSQMSGNIIISGSTDRT 1056
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+KVW D D+ CV T+ GH+ST+ + + G K+VS S D T+++W
Sbjct: 1057 LKVW-----DMDSGACVHTLQ----GHTSTVRCMHLH--GSKVVSGSRDATLRVW 1100
Score = 102 (41.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 158 VLQGHAQDV-KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
VL+GH V +Q+ V S S DNT+KVW A N C++T+ GH+
Sbjct: 989 VLKGHDDHVITCLQFSGNRIV--SGSDDNTLKVWSAV-----NGKCLRTLV----GHTGG 1037
Query: 217 IWALSFNAKGDKLVSCSDDLTIKIW----GADITRMQSGDGYASWRHLC---TISGYHDR 269
+W S G+ ++S S D T+K+W GA + +Q HL +SG D
Sbjct: 1038 VW--SSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDA 1095
Query: 270 TI 271
T+
Sbjct: 1096 TL 1097
Score = 79 (32.9 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA 337
R+ I+ SG AD +V+ + D+ G + L K H V +Q++ R + ++
Sbjct: 1204 RQNILVSGNADSTVKVW-----DITTGQCLQTLSGPNKHHSA-VTCLQFNS---RFVVTS 1254
Query: 338 SDDGMIKIWEL 348
SDDG +K+W++
Sbjct: 1255 SDDGTVKLWDV 1265
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 219 (82.2 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 70/260 (26%), Positives = 114/260 (43%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PYILTSSDDMLIKLWDWEKK---WSCS 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGH+ V +
Sbjct: 136 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHDKGVNCID 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V V +HP + ++ + S
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCVNFHPELPIIITGSE 249
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD---LTIKI 240
D T+++W S + T+ N G +W +S +G V+ D + IK+
Sbjct: 250 DGTVRIW-----HSSTYRLESTL---NYG-MERVWCVS-GLRGSNSVALGYDEGSIIIKL 299
Query: 241 WGADITRMQSGDGYASW-RH 259
+ +G W +H
Sbjct: 300 GREEPAMSMDTNGKIIWAKH 319
Score = 176 (67.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 53/215 (24%), Positives = 99/215 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 96 EAHSDYIRCIAVHPTQPYILTSSDDMLIKLW-DWEKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 155 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHDKGVNCIDYYSGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + ++F+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQTLE----GHAQNVSCVNFHPELPIIITGSEDGTVRIWHSSTYR 262
Query: 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREGII 282
++S Y R C +SG ++ + II
Sbjct: 263 LESTLNYGMERVWC-VSGLRGSNSVALGYDEGSII 296
Score = 133 (51.9 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 40/167 (23%), Positives = 71/167 (42%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V+S PS + + ++ + C+W V T E + V++ + A + T
Sbjct: 18 VKSVDLHPSEPWMLASLYNGSVCVWNHE--TQTLVKTFEVCDLPVRASKFVARKNWVITG 75
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW-WAEDT 195
D + ++ N E V + + H+ ++ + HPT + + S D IK+W W +
Sbjct: 76 ADDMQIRVFNY---NTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEK-- 130
Query: 196 DSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
W C Q GH+ + + N K ++ S S D TIK+W
Sbjct: 131 ---KWSCSQVFE----GHTHYVMQIVINPKDNNQFASASLDRTIKVW 170
Score = 59 (25.8 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 293 FFVESKDD-LIDGPSY--KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ + DD L+ Y K ++ + H +V+ V + P E ++ + S+DG ++IW
Sbjct: 201 YLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHP-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 217 (81.4 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 56 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 106
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 107 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 163
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V +HP + ++ + S
Sbjct: 164 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCASFHPELPIIITGSE 220
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 221 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 256
Score = 177 (67.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 67 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 125
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 126 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 182
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + SF+ + +++ S+D T++IW + R
Sbjct: 183 KIW-----DYQNKTCVQTLE----GHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 233
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 234 LESTLNYGMERVWCVAS 250
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 199 (75.1 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 55/192 (28%), Positives = 90/192 (46%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS 60
+E+++ N + + HTD V+ + DG ASC DKT+++++
Sbjct: 595 LEWINKKNIKNLSRLVVRPHTDAVYHACFSE----DGQR--IASCGADKTLQVFKAETGE 648
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120
+ KA H V CA+S + +AT S D IW V G E V + + H +
Sbjct: 649 KLLEIKA-----HEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTG--ELVQSYDEHSEQ 701
Query: 121 VKSVSW--NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
V + N++ LLAT D + +W++ N+ EC + + GH V ++ P +L
Sbjct: 702 VNCCHFTNNSNHLLLATGSSDYFLKLWDL---NQKECRNTMFGHTNSVSHCRFSPDDKLL 758
Query: 179 FSCSYDNTIKVW 190
SCS D T+K+W
Sbjct: 759 ASCSADGTLKLW 770
Score = 185 (70.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 62/229 (27%), Positives = 99/229 (43%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK--LLATASFDATTCI 100
A+CS DK V+IW + +E H+ V C ++ + LLAT S D +
Sbjct: 673 ATCSVDKKVKIWNSVTGELVQS----YDE-HSEQVNCCHFTNNSNHLLLATGSSDYFLKL 727
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W D+ EC T+ GH N V ++ LLA+C D ++ +W+V NE + ++V Q
Sbjct: 728 W-DLN-QKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQ 785
Query: 161 GHAQDVKMVQWHPTMDVLFSC---SYDNTIKVWWAEDTDS-DNWHCVQTISESNNGHSST 216
+ + M+V+ C S D V A++ N H ++E + GH ST
Sbjct: 786 FFLNSEESQE---DMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHTGHHST 842
Query: 217 IWALSFNAKGDKLVSCSDDLTIKIWGAD-ITRMQSGDGYASWRHLCTIS 264
I F+ V +++W D ++ G+ SW H S
Sbjct: 843 IQYCDFSPSNHLAVVALSQYCVELWNMDSCLKVADCRGHLSWVHCAMFS 891
Score = 158 (60.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 57/235 (24%), Positives = 98/235 (41%)
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
N ++ HT V +S G+ +A+ D T +++ G E + ++ HE+EV
Sbjct: 605 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETG--EKLLEIKAHEDEVLC 662
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSC 181
+++A +ATC DK V IW + G E V H++ V + + +L +
Sbjct: 663 CAFSADDRFIATCSVDKKVKIWNSVTG---ELVQSYDEHSEQVNCCHFTNNSNHLLLATG 719
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D +K+W D + C T+ GH++++ F+ L SCS D T+K+W
Sbjct: 720 SSDYFLKLW-----DLNQKECRNTMF----GHTNSVSHCRFSPDDKLLASCSADGTLKLW 770
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIF--SVHWSREGIIASGAADDSVQFF 294
+ + L + D + WS +G AA + V F
Sbjct: 771 DVKSANERKSINVKQF-FLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLF 824
Score = 147 (56.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 49/212 (23%), Positives = 95/212 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ A+ S D +++W+ + C+ + HT +V C +SP KLLA+ S D T +
Sbjct: 715 LLATGSSDYFLKLWDLNQKE----CRNTMFG-HTNSVSHCRFSPDDKLLASCSADGTLKL 769
Query: 101 WE-DVGGDYECVAT----LEGHENE------VKSVSWNASGTLLATCGRDKSVWIWEVMP 149
W+ + + + L E++ VK SW+A G L ++K V ++ +
Sbjct: 770 WDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNK-VLLFNIHT 828
Query: 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209
G + GH ++ + P+ + +++W + DS C++ +++
Sbjct: 829 GGLL--AEIHTGHHSTIQYCDFSPSNHLAVVALSQYCVELW---NMDS----CLK-VADC 878
Query: 210 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH S + F+ G ++ SDD TI++W
Sbjct: 879 R-GHLSWVHCAMFSPDGSSFLTSSDDETIRLW 909
Score = 117 (46.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 64/272 (23%), Positives = 111/272 (40%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V C SP + LA S D + E + + H+N V+ + + G + +
Sbjct: 964 VSCCCLSPHLQYLAFGSDDGAIQVLELLNN--RLFQSRTRHKNTVRHIQFTTDGKNVISS 1021
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D ++ +W +E E VS LQ H + VK + +L S S+D T+KVW
Sbjct: 1022 SDDSAIQVWNWQ--SE-ETVS-LQAHQETVKDFRLLKNSRLL-SWSFDGTVKVW------ 1070
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS 256
N I + H T+ + + K S S D T KIW D+ +
Sbjct: 1071 --NI-ITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLL--------SP 1119
Query: 257 WRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA 316
L G + FSV + ++A+G + ++ + S +L+ + ++
Sbjct: 1120 LHELRGHKGCVRCSAFSVDST---LLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAAT 1176
Query: 317 HDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
H V +++SP + ++L SA G +K W +
Sbjct: 1177 HGGWVTDLRFSP-DGKMLVSAG--GYLKWWNV 1205
Score = 68 (29.0 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 40/171 (23%), Positives = 67/171 (39%)
Query: 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD-ITRMQSGDGYASW 257
N H ++E + GH STI F+ V +++W D ++ G+ SW
Sbjct: 825 NIHTGGLLAEIHTGHHSTIQYCDFSPSNHLAVVALSQYCVELWNMDSCLKVADCRGHLSW 884
Query: 258 RHLCTIS--------GYHDRTIFSVHWSREGIIASGAA--DDSVQF-FVESKDDLIDGPS 306
H S D TI W + + + A + + F E++ ++ +
Sbjct: 885 VHCAMFSPDGSSFLTSSDDETIRL--WETKKVCKNSAIVLNKKIDVVFQENEVMVLAVDN 942
Query: 307 YKML-LKKEKAHDMD------VNSVQWSPGERRLLASASDDGMIKIWELAN 350
+ L + K +D V+ SP + LA SDDG I++ EL N
Sbjct: 943 IRRLQVINGKTGQIDYLTEAQVSCCCLSP-HLQYLAFGSDDGAIQVLELLN 992
Score = 64 (27.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
L EI T GH + + P+ + VA + C V +W + + +C+ L
Sbjct: 832 LAEIHT--GHHSTIQYCDFSPSNHLAVVA-LSQYC-----VELWNMDSCLKVADCRGHLS 883
Query: 71 EMHTRTVRSCA-WSPSGKLLATASFDATTCIWE 102
+H CA +SP G T+S D T +WE
Sbjct: 884 WVH------CAMFSPDGSSFLTSSDDETIRLWE 910
Score = 62 (26.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKML--LKKEKAHDMDVNSVQWSPGERRLLA 335
++ +++ + D+ +F S D S+ +L L + + H V +S + LLA
Sbjct: 1085 QDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSV-DSTLLA 1143
Query: 336 SASDDGMIKIWELAN 350
+ D+G I+IW ++N
Sbjct: 1144 TGDDNGEIRIWNVSN 1158
>UNIPROTKB|F1NMC6 [details] [associations]
symbol:ELP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0046425 "regulation of JAK-STAT
cascade" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046425 GeneTree:ENSGT00390000000916 OMA:DCLIRIW
EMBL:AADN02008271 IPI:IPI00593505 ProteinModelPortal:F1NMC6
Ensembl:ENSGALT00000021568 Uniprot:F1NMC6
Length = 822
Score = 150 (57.9 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVA--PV-FASCSGDKTVRIWEQSASSRF 62
D Y + L GH + V+++ W+P+ G P+ S S DKTV IWE S
Sbjct: 263 DTTYAITLESVLAGHENWVYAVHWQPSFSKGGSMQQPMRILSASMDKTVIIWEPDKESGV 322
Query: 63 WNCKAVLEEMHTRTVR--SCAWSPSGKLLATASFDATTCIWEDVG---GDYECVATLEGH 117
W + + E+ T+ C +SP G ++ +F +W+ ++ + GH
Sbjct: 323 WLEQVRVGEVGGNTLGFFDCQFSPDGSMIIAHAFHGAFHLWKQASVSKKEWTPEVVISGH 382
Query: 118 ENEVKSVSWNASGTLLATCGRDKS 141
N V+ V W+ G + + G D++
Sbjct: 383 FNSVEDVQWDPEGEFIISVGSDQT 406
Score = 141 (54.7 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLE 70
R + L GH RV + W DG S + DK + +WE + + K+V
Sbjct: 48 RTVAALRGHGGRVSCVRWIRRR--DGATETELVSGASDKKLILWEWNRNQLV---KSVPL 102
Query: 71 EMHTRTVRSCAWS-------PSGKLL-ATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
E HT V CA P LL A+A+ D+T IW + +C+ L+ V
Sbjct: 103 EGHTEAV--CAVDAIYQSDEPDLNLLIASAASDSTVRIWSRHDSEVKCIEVLQFGNGFVM 160
Query: 123 SVSWN---ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179
VS + S + CG D + +F+ L GH ++ V+W D LF
Sbjct: 161 DVSLSFLPGSNVPILACGGDDCKINLFIQQNGQFQKTLTLPGHEDWIRGVEWAICGDDLF 220
Query: 180 --SCSYDNTIKVW 190
SC+ D I++W
Sbjct: 221 LASCAQDCLIRIW 233
Score = 127 (49.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRT 76
LEGHT+ V ++ + + + AS + D TVRIW + S C VL+ +
Sbjct: 102 LEGHTEAVCAVDAIYQSDEPDLNLLIASAASDSTVRIWSRHDSEV--KCIEVLQFGNGFV 159
Query: 77 VR-SCAWSPSGK--LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-- 131
+ S ++ P +LA D ++ G ++ TL GHE+ ++ V W G
Sbjct: 160 MDVSLSFLPGSNVPILACGGDDCKINLFIQQNGQFQKTLTLPGHEDWIRGVEWAICGDDL 219
Query: 132 LLATCGRDKSVWIWEV 147
LA+C +D + IW+V
Sbjct: 220 FLASCAQDCLIRIWKV 235
Score = 118 (46.6 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 55/257 (21%), Positives = 107/257 (41%)
Query: 111 VATLEGHENEVKSVSWNASGTLLAT-CGRDK----SVWIWEVMPGNEFECVSVLQGHAQD 165
V L GH E+ V+ N S T++A+ C K ++ +W + ++ + L H
Sbjct: 555 VQKLYGHGYEIFCVACNNSNTVIASACKASKKEHAAIILWST---SSWKKIQSLPFHNLT 611
Query: 166 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN--WHCVQTISESNNGHSSTIWALSFN 223
V + + P +L + S D +W ED+ + C ++ HS IW+ +
Sbjct: 612 VTQLAFSPNDKLLLAVSRDRNWSLWREEDSSESGPVFSCCAYTDKNTAVHSRIIWSCDWT 671
Query: 224 AKGDKLVSCSDDLTIKIWG-ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR---- 278
V+ S D + IWG D+ G S + T+ D ++ +V SR
Sbjct: 672 PDSKYFVTGSRDKKVIIWGQCDLPVTTEGIVLDSIKPCSTVLDAGD-SVTAVSISRVLTP 730
Query: 279 EG--IIASGAADDSVQFFV---ESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+G ++A G + + F+ ++ + + + + ++H + V + W E R
Sbjct: 731 DGRYVVAIGLENGKINFYTWKQSGQEPSVADWTKCVEMDNSQSHALAVKRLCWRHREGR- 789
Query: 334 LASASDDGMIKIWELAN 350
A +D+ + +LA+
Sbjct: 790 -AGHNDENNSEWLQLAS 805
Score = 59 (25.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 43/194 (22%), Positives = 80/194 (41%)
Query: 163 AQDVKMVQWHP-TMDVLFSCSYDNTIK----VWWAEDTDSDNWHCVQTISESNNGHSSTI 217
AQD + W T FS D++I+ ++ +DTD+ + + T+ GH + +
Sbjct: 225 AQDCLIRIWKVCTKSKQFSEIEDDSIRLKENIFTVKDTDTT--YAI-TLESVLAGHENWV 281
Query: 218 WAL----SFNAKGD-----KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHD 268
+A+ SF+ G +++S S D T+ IW D +SG W +
Sbjct: 282 YAVHWQPSFSKGGSMQQPMRILSASMDKTVIIWEPD---KESG----VWLEQVRVGEVGG 334
Query: 269 RTI--FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
T+ F +S +G +I + A + + ++ + ++ H V VQ
Sbjct: 335 NTLGFFDCQFSPDGSMIIAHAFHGAFHLWKQASVSKKEWTPEVVI----SGHFNSVEDVQ 390
Query: 326 WSPGERRLLASASD 339
W P +++ SD
Sbjct: 391 WDPEGEFIISVGSD 404
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 211 (79.3 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 51/172 (29%), Positives = 87/172 (50%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYE-CVATLEGHENEVKSVSWNAS 129
E HT+++ S +SP GK L T+S D T IW D+ C TL GH+ V ++W++
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKLGVNDIAWSSD 140
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
+ + DK++ I+E++ L+GH V ++P ++ S S+D ++++
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRI 197
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
W D C++T+ HS + A+SFN G + S S D ++IW
Sbjct: 198 W-----DVKTGMCIKTLP----AHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Score = 206 (77.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 68/231 (29%), Positives = 112/231 (48%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+TL GH V +AW D V S S DKT++I+E +SR K + + H
Sbjct: 123 RTLTGHKLGVNDIAWSS----DSRCVV--SASDDKTLKIFE-IVTSRM--TKTL--KGHN 171
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
V C ++P L+ + SFD + IW+ G C+ TL H + V +VS+N G+L+A
Sbjct: 172 NYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG--MCIKTLPAHSDPVSAVSFNRDGSLIA 229
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193
+ D V IW+ G +C+ L V V++ P + + + D+T+K+W
Sbjct: 230 SGSYDGLVRIWDTANG---QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW--- 283
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWAL--SFNAKGDK-LVSCSDDLTIKIW 241
D +T+ + GH ++ + + +F+ G K ++S S+D I IW
Sbjct: 284 DFSKG-----KTLKQYT-GHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Score = 202 (76.2 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY+L + TLEGHT + S + P G + S DKTV+IW C+
Sbjct: 76 NYKL--MCTLEGHTKSISSAKFSPCGKYLGTS------SADKTVKIWNMDHMI----CER 123
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
L H V AWS + + +AS D T I+E V TL+GH N V ++N
Sbjct: 124 TLTG-HKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTS--RMTKTLKGHNNYVFCCNFN 180
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
+L+ + D+SV IW+V G C+ L H+ V V ++ ++ S SYD +
Sbjct: 181 PQSSLVVSGSFDESVRIWDVKTGM---CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 188 KVW 190
++W
Sbjct: 238 RIW 240
Score = 159 (61.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 51/182 (28%), Positives = 86/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I+TL H+D V ++++ DG + AS S D VRIW+ +A+ + C L +
Sbjct: 206 IKTLPAHSDPVSAVSFNR----DG--SLIASGSYDGLVRIWD-TANGQ---CIKTLVDDE 255
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + ++ D+T +W+ G + + GHEN + N S G
Sbjct: 256 NPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG--KTLKQYTGHENSKYCIFANFSVTGG 313
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIK 188
+ + D ++IW + +C L+GH Q V HP +++ S + DN I
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQC---LEGHTQPVLASDCHPVQNIIASGALEPDNKIH 370
Query: 189 VW 190
+W
Sbjct: 371 IW 372
Score = 153 (58.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
+Y+ + TLEGH + S ++ G L T DK+V IW + + C L GH V
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKLGV 132
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
+ W + S S D T+K++ E S ++++ GH++ ++ +FN +
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIF--EIVTS-------RMTKTLKGHNNYVFCCNFNPQS 183
Query: 227 DKLVSCSDDLTIKIW 241
+VS S D +++IW
Sbjct: 184 SLVVSGSFDESVRIW 198
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 34/143 (23%), Positives = 73/143 (51%)
Query: 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNG 212
++ + L+GH + + ++ P L + S D T+K+W + D+ C +T++ G
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW-----NMDHMICERTLT----G 127
Query: 213 HSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIF 272
H + +++++ +VS SDD T+KI+ +RM T+ G H+ +F
Sbjct: 128 HKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTK-----------TLKG-HNNYVF 175
Query: 273 SVHWS-REGIIASGAADDSVQFF 294
+++ + ++ SG+ D+SV+ +
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIW 198
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 211 (79.3 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 51/172 (29%), Positives = 87/172 (50%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYE-CVATLEGHENEVKSVSWNAS 129
E HT+++ S +SP GK L T+S D T IW D+ C TL GH+ V ++W++
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKLGVNDIAWSSD 140
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
+ + DK++ I+E++ L+GH V ++P ++ S S+D ++++
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSR---MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRI 197
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
W D C++T+ HS + A+SFN G + S S D ++IW
Sbjct: 198 W-----DVKTGMCIKTLP----AHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Score = 206 (77.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 68/231 (29%), Positives = 112/231 (48%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
+TL GH V +AW D V S S DKT++I+E +SR K + + H
Sbjct: 123 RTLTGHKLGVNDIAWSS----DSRCVV--SASDDKTLKIFE-IVTSRM--TKTL--KGHN 171
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
V C ++P L+ + SFD + IW+ G C+ TL H + V +VS+N G+L+A
Sbjct: 172 NYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG--MCIKTLPAHSDPVSAVSFNRDGSLIA 229
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193
+ D V IW+ G +C+ L V V++ P + + + D+T+K+W
Sbjct: 230 SGSYDGLVRIWDTANG---QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW--- 283
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWAL--SFNAKGDK-LVSCSDDLTIKIW 241
D +T+ + GH ++ + + +F+ G K ++S S+D I IW
Sbjct: 284 DFSKG-----KTLKQYT-GHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Score = 202 (76.2 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA 67
NY+L + TLEGHT + S + P G + S DKTV+IW C+
Sbjct: 76 NYKL--MCTLEGHTKSISSAKFSPCGKYLGTS------SADKTVKIWNMDHMI----CER 123
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
L H V AWS + + +AS D T I+E V TL+GH N V ++N
Sbjct: 124 TLTG-HKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTS--RMTKTLKGHNNYVFCCNFN 180
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
+L+ + D+SV IW+V G C+ L H+ V V ++ ++ S SYD +
Sbjct: 181 PQSSLVVSGSFDESVRIWDVKTGM---CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 188 KVW 190
++W
Sbjct: 238 RIW 240
Score = 159 (61.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 51/182 (28%), Positives = 86/182 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I+TL H+D V ++++ DG + AS S D VRIW+ +A+ + C L +
Sbjct: 206 IKTLPAHSDPVSAVSFNR----DG--SLIASGSYDGLVRIWD-TANGQ---CIKTLVDDE 255
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---G 130
V +SP+GK + ++ D+T +W+ G + + GHEN + N S G
Sbjct: 256 NPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG--KTLKQYTGHENSKYCIFANFSVTGG 313
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIK 188
+ + D ++IW + +C L+GH Q V HP +++ S + DN I
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQC---LEGHTQPVLASDCHPVQNIIASGALEPDNKIH 370
Query: 189 VW 190
+W
Sbjct: 371 IW 372
Score = 153 (58.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166
+Y+ + TLEGH + S ++ G L T DK+V IW + + C L GH V
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKLGV 132
Query: 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
+ W + S S D T+K++ E S ++++ GH++ ++ +FN +
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIF--EIVTS-------RMTKTLKGHNNYVFCCNFNPQS 183
Query: 227 DKLVSCSDDLTIKIW 241
+VS S D +++IW
Sbjct: 184 SLVVSGSFDESVRIW 198
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 34/143 (23%), Positives = 73/143 (51%)
Query: 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNG 212
++ + L+GH + + ++ P L + S D T+K+W + D+ C +T++ G
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW-----NMDHMICERTLT----G 127
Query: 213 HSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIF 272
H + +++++ +VS SDD T+KI+ +RM T+ G H+ +F
Sbjct: 128 HKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTK-----------TLKG-HNNYVF 175
Query: 273 SVHWS-REGIIASGAADDSVQFF 294
+++ + ++ SG+ D+SV+ +
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIW 198
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 205 (77.2 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 71/248 (28%), Positives = 103/248 (41%)
Query: 14 IQTLEGHTDRVWSLAWK-PTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
I TL GH VW + W P G + ASCS D V IW++ + R W+ AV +
Sbjct: 46 IDTLTGHEGPVWRVDWAHPKFGT-----ILASCSYDGKVLIWKEE-NGR-WSQIAV-HAV 97
Query: 73 HTRTVRSCAWSPS--GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW---- 126
H+ +V S W+P G LL AS D + E ++ H V S SW
Sbjct: 98 HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157
Query: 127 -----NASGTL----LATCGRDKSVWIWEV-MPGNEFECVSVLQGHAQDVKMVQWHPTM- 175
+GT T G D V IW+ + S L+GH+ V+ V W PT+
Sbjct: 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 217
Query: 176 --DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
L S S D T +W +D + W +T+ + +W S++ G+ L
Sbjct: 218 LRSYLASVSQDRTCIIW-TQDNEQGPWK--KTLLKEEK-FPDVLWRASWSLSGNVLALSG 273
Query: 234 DDLTIKIW 241
D + +W
Sbjct: 274 GDNKVTLW 281
Score = 189 (71.6 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 78/288 (27%), Positives = 122/288 (42%)
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
V+ H + GK LAT S D T I+E G ++ + TL GHE V V W
Sbjct: 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWA 62
Query: 128 AS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW--HPTMDVLFSCSY 183
GT+LA+C D V IW+ G + ++V H+ V VQW H +L S
Sbjct: 63 HPKFGTILASCSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS 121
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
D + V E ++ + I G +S WA + + + + GA
Sbjct: 122 DGKVSV--VEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178
Query: 244 D-ITRMQSGDGYASWRHL-CTISGYHDRTIFSVHWSREGIIASGAADDSVQ--FFVESKD 299
D + ++ + A L T+ G+ D + V WS ++ S A S + ++D
Sbjct: 179 DNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237
Query: 300 DLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+ GP K LLK+EK D+ + WS +LA + D + +W+
Sbjct: 238 NE-QGPWKKTLLKEEKFPDV-LWRASWSLSGN-VLALSGGDNKVTLWK 282
Score = 152 (58.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 72/255 (28%), Positives = 102/255 (40%)
Query: 111 VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170
V H + + G LATC DK++ I+EV G + + L GH V V
Sbjct: 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEV-EGETHKLIDTLTGHEGPVWRVD 60
Query: 171 W-HPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228
W HP +L SCSYD + +W E+ W + + + +S WA + G
Sbjct: 61 WAHPKFGTILASCSYDGKVLIWKEEN---GRWSQIAVHAVHSASVNSVQWAP--HEYGPL 115
Query: 229 LVSCSDDLTIKIW-----GAD----ITRMQSGDGYASWRHLCTIS--GYHDRTIFSVHWS 277
L+ S D + + G I G ASW TI G H+ T S
Sbjct: 116 LLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP-ATIEEDGEHNGT----KES 170
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE--RRLLA 335
R+ + +G AD+ V+ + + D +Y +L + H V V WSP R LA
Sbjct: 171 RKFV--TGGADNLVKIWKYNSD----AQTY-VLESTLEGHSDWVRDVAWSPTVLLRSYLA 223
Query: 336 SASDDGMIKIWELAN 350
S S D IW N
Sbjct: 224 SVSQDRTCIIWTQDN 238
Score = 151 (58.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWS-PS-GKLLATASFDATT 98
A+CS DKT++I+E + +++ + H V W+ P G +LA+ S+D
Sbjct: 25 ATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79
Query: 99 CIWEDVGGDYECVATLEGHENEVKSVSW--NASGTLLATCGRDKSVWIWEVMPGNEFECV 156
IW++ G + +A H V SV W + G LL D V + E +
Sbjct: 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI 139
Query: 157 SVLQGHAQDVKMVQWHP-TMDV------------LFSCSYDNTIKVWWAEDTDSDNWHCV 203
++ HA V W P T++ + DN +K+W ++D+ +
Sbjct: 140 -IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW-KYNSDAQTYVLE 197
Query: 204 QTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTI 263
T+ ++ W+ + + L S S D T IW D + G W+
Sbjct: 198 STLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQD---NEQGP----WKKTLLK 249
Query: 264 SGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES 297
++ WS G ++A D+ V + E+
Sbjct: 250 EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284
Score = 130 (50.8 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 33/95 (34%), Positives = 46/95 (48%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TLEGH+D V +AW PT + AS S D+T IW Q W + EE
Sbjct: 199 TLEGHSDWVRDVAWSPTVLLRSY---LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD 255
Query: 76 TVRSCAWSPSGKLLATASFDATTCIW-EDVGGDYE 109
+ +WS SG +LA + D +W E++ G +E
Sbjct: 256 VLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWE 290
>DICTYBASE|DDB_G0276423 [details] [associations]
symbol:hira "histone cell cycle regulation defective
homolog A" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007110 InterPro:IPR011494 InterPro:IPR015943
InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569 Pfam:PF09453
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0276423 GO:GO:0005634 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:AAFI02000015 KO:K11293 RefSeq:XP_643117.1
ProteinModelPortal:Q86HX1 STRING:Q86HX1 EnsemblProtists:DDB0233325
GeneID:8620522 KEGG:ddi:DDB_G0276423 OMA:DIHPDES
ProtClustDB:CLSZ2497234 Uniprot:Q86HX1
Length = 1114
Score = 219 (82.2 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 59/174 (33%), Positives = 84/174 (48%)
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIW---------EDVGGDYECVATLEGHEN 119
+E H +V S WS GK LA+ S D IW ++ ++ CVATL GH +
Sbjct: 63 IENAHFHSVNSVKWSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHAS 122
Query: 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179
++ VSW+ +ATC DKS+ IWE N+F+ VS L+ H VK + W P L
Sbjct: 123 DISEVSWSPDNKYIATCSFDKSIIIWET---NKFQMVSKLEEHKGFVKGLTWDPLGRYLA 179
Query: 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL--SFNAKGDKLVS 231
S S D ++ +W D W V+TI HS + L S+ G +V+
Sbjct: 180 SQSEDKSLIIWRTSD-----W-VVETIVTEPFKHSGNSFFLRPSWTPDGQFIVA 227
Score = 174 (66.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 50/177 (28%), Positives = 81/177 (45%)
Query: 84 PSGKLLATASFDATTCIW----------EDVGGDYECVATLEG-HENEVKSVSWNASGTL 132
P G +AT DA IW E+ G + + ++E H + V SV W+ G
Sbjct: 23 PDGTRVATGGGDAKIKIWSMAPISLLEAEEDAGIPKLLCSIENAHFHSVNSVKWSKDGKY 82
Query: 133 LATCGRDKSVWIWEVMPGNE--------FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD 184
LA+ DK IW + N + CV+ L+GHA D+ V W P + +CS+D
Sbjct: 83 LASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHASDISEVSWSPDNKYIATCSFD 142
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+I +W +++ + V + E H + L+++ G L S S+D ++ IW
Sbjct: 143 KSIIIW-----ETNKFQMVSKLEE----HKGFVKGLTWDPLGRYLASQSEDKSLIIW 190
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 36/136 (26%), Positives = 72/136 (52%)
Query: 216 TIWALSFNAKGDKLVSCSDDLTIKIWG-ADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274
+I+++ + G ++ + D IKIW A I+ +++ + + LC+I H ++ SV
Sbjct: 15 SIYSIDIHPDGTRVATGGGDAKIKIWSMAPISLLEAEEDAGIPKLLCSIENAHFHSVNSV 74
Query: 275 HWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKML-LKKEKAHDMDVNSVQWSPGER 331
WS++G +ASG+ D + + + + L+ + + + + H D++ V WSP +
Sbjct: 75 KWSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHASDISEVSWSP-DN 133
Query: 332 RLLASASDDGMIKIWE 347
+ +A+ S D I IWE
Sbjct: 134 KYIATCSFDKSIIIWE 149
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 58/223 (26%), Positives = 97/223 (43%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TL GH + ++W P D A+CS DK++ IWE +++F + LEE H
Sbjct: 114 VATLRGHASDISEVSWSP----DN--KYIATCSFDKSIIIWE---TNKF-QMVSKLEE-H 162
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSV----SWNAS 129
V+ W P G+ LA+ S D + IW E + T E ++ S SW
Sbjct: 163 KGFVKGLTWDPLGRYLASQSEDKSLIIWRTSDWVVETIVT-EPFKHSGNSFFLRPSWTPD 221
Query: 130 GT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV-------KMVQWHPTMDVLFSC 181
G ++AT G + + ++ +++ L GH + V K+ + + D F
Sbjct: 222 GQFIVATHGINNATHTGVLVSRTDWDIGLDLVGHRKAVVVSRCSSKIYKDFKSRDQKFCL 281
Query: 182 ----SYDNTIKVWWAED------TDSDNWHCVQTISESNNGHS 214
D+T+ +W + T S C+Q IS ++G+S
Sbjct: 282 ILLGGQDSTLSLWSSSSPRSLMVTRSLFDQCIQDISWCSDGYS 324
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC----------VSVLQGHAQDVKMVQ 170
+ S+ + GT +AT G D + IW + P + E S+ H V V+
Sbjct: 16 IYSIDIHPDGTRVATGGGDAKIKIWSMAPISLLEAEEDAGIPKLLCSIENAHFHSVNSVK 75
Query: 171 WHPTMDVLFSCSYDNTIKVWWAEDTDS------DNWHCVQTISESNNGHSSTIWALSFNA 224
W L S S D +W + +S +NW CV T+ GH+S I +S++
Sbjct: 76 WSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATL----RGHASDISEVSWSP 131
Query: 225 KGDKLVSCSDDLTIKIWGADITRMQS 250
+ +CS D +I IW + +M S
Sbjct: 132 DNKYIATCSFDKSIIIWETNKFQMVS 157
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 214 (80.4 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 63/232 (27%), Positives = 112/232 (48%)
Query: 23 RVWSL-AWKPTAGVDG----VAPVFASCSGDKTVRIWEQSASSRFWNCKA---VL-EEMH 73
++WSL + +P A ++G VA V SG + + S R W+ +A +L +E H
Sbjct: 305 KLWSLESDEPVADIEGHSMRVARVMWHPSG-RFLGTTCYDHSWRLWDLEAQEEILHQEGH 363
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
++ V A+ G L T DA +W+ G C+ LEGH E+ ++++ +G +
Sbjct: 364 SKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTG--RCIMFLEGHLKEIYGLNFSPNGYHV 421
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWA 192
AT D + +W++ + +C+ + H V V++ P + L + +YDNT K+W
Sbjct: 422 ATGSGDNTCKVWDL---RQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW-- 476
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
W ++T++ GH + L + G + +CS D T K+W A+
Sbjct: 477 ---THPGWSPLKTLA----GHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE 521
Score = 209 (78.6 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 55/200 (27%), Positives = 92/200 (46%)
Query: 14 IQTLEGHTDRVWSLAWKP--TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ TL GH+ V ++ + P T +D ASC+ D +V++W + + E
Sbjct: 265 VHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADI-----E 319
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT 131
H+ V W PSG+ L T +D + +W D+ E + EGH V ++++ G+
Sbjct: 320 GHSMRVARVMWHPSGRFLGTTCYDHSWRLW-DLEAQEE-ILHQEGHSKGVYDIAFHTDGS 377
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T G D +W++ G C+ L+GH +++ + + P + + S DNT KVW
Sbjct: 378 LAGTGGLDAFGRVWDLRTGR---CIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVW- 433
Query: 192 AEDTDSDNWHCVQTISESNN 211
D C+ TI N
Sbjct: 434 ----DLRQRKCIYTIPAHQN 449
Score = 164 (62.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 48/175 (27%), Positives = 80/175 (45%)
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-- 132
R + C +SP+ KLLATA + +W D V TL GH V ++ ++ T+
Sbjct: 231 RPLSYCHFSPNSKLLATACWSGLCKLWSVP--DCNLVHTLRGHSTNVGAIVFHPKATVSL 288
Query: 133 ------LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
LA+C D SV +W + E V+ ++GH+ V V WHP+ L + YD++
Sbjct: 289 DKKDVNLASCAADGSVKLWSL---ESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHS 345
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++W E + H GHS ++ ++F+ G + D ++W
Sbjct: 346 WRLWDLE-AQEEILH--------QEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVW 391
Score = 164 (62.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 53/182 (29%), Positives = 82/182 (45%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
EI EGH+ V+ +A+ + G + D R+W+ R C LE
Sbjct: 356 EILHQEGHSKGVYDIAFHTDGSLAGTGGL------DAFGRVWDL----RTGRCIMFLEG- 404
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-GT 131
H + + +SP+G +AT S D T +W D+ +C+ T+ H+N V V + + G
Sbjct: 405 HLKEIYGLNFSPNGYHVATGSGDNTCKVW-DLR-QRKCIYTIPAHQNLVTGVKFEPNHGN 462
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T D + IW PG + + L GH V + ++ +CSYD T K+W
Sbjct: 463 FLLTGAYDNTAKIW-THPG--WSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWT 519
Query: 192 AE 193
AE
Sbjct: 520 AE 521
Score = 145 (56.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 40/135 (29%), Positives = 61/135 (45%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
R I LEGH ++ L + P G A+ SGD T ++W+ + A
Sbjct: 397 RCIMFLEGHLKEIYGLNFSPN-GYH-----VATGSGDNTCKVWDLRQRKCIYTIPA---- 446
Query: 72 MHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
H V + P+ G L T ++D T IW G + + TL GHE +V + + G
Sbjct: 447 -HQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPG--WSPLKTLAGHEGKVMGLDISLDG 503
Query: 131 TLLATCGRDKSVWIW 145
L+ATC D++ +W
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
LA+ + D + +W + D E VA +EGH V V W+ SG L T D S +W++
Sbjct: 295 LASCAADGSVKLWS-LESD-EPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLE 352
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
E + +GH++ V + +H + + D +VW D C+ +
Sbjct: 353 AQEE---ILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVW-----DLRTGRCIMFLE- 403
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH I+ L+F+ G + + S D T K+W
Sbjct: 404 ---GHLKEIYGLNFSPNGYHVATGSGDNTCKVW 433
Score = 54 (24.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 267 HDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H + I+ +++S G +A+G+ D++ + + DL + + AH V V+
Sbjct: 405 HLKEIYGLNFSPNGYHVATGSGDNTCKVW-----DL----RQRKCIYTIPAHQNLVTGVK 455
Query: 326 WSPGERRLLASASDDGMIKIW 346
+ P L + + D KIW
Sbjct: 456 FEPNHGNFLLTGAYDNTAKIW 476
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 217 (81.4 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 56 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 106
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 107 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 163
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V +HP + ++ + S
Sbjct: 164 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCASFHPELPIIITGSE 220
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 221 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 256
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 67 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 125
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 126 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 182
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + SF+ + +++ S+D T++IW + R
Sbjct: 183 KIW-----DYQNKTCVQTLE----GHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 233
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 234 LESTLNYGMERVWCVAS 250
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 217 (81.4 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 136 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V +HP + ++ + S
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCASFHPELPIIITGSE 249
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 250 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 285
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 155 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + SF+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQTLE----GHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 263 LESTLNYGMERVWCVAS 279
Score = 136 (52.9 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V+S P+ + + ++ + C+W V T E + V++ + A + T
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHE--TQTLVKTFEVCDLPVRAAKFVARKNWVVTG 75
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D + ++ N E V + + H+ ++ + HPT + + S D IK+W D D
Sbjct: 76 ADDMQIRVFNY---NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW---DWD 129
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
W C Q GH+ + + N K ++ S S D TIK+W
Sbjct: 130 K-KWSCSQVFE----GHTHYVMQIVINPKDNNQFASASLDRTIKVW 170
Score = 55 (24.4 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 293 FFVESKDD-LIDGPSY--KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ + DD L+ Y K ++ + H +V+ + P E ++ + S+DG ++IW
Sbjct: 201 YLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 217 (81.4 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 136 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V +HP + ++ + S
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCASFHPELPIIITGSE 249
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 250 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 285
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 155 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + SF+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQTLE----GHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 263 LESTLNYGMERVWCVAS 279
Score = 136 (52.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V+S P+ + + ++ + C+W V T E + V++ + A + T
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHE--TQTLVKTFEVCDLPVRAAKFVARKNWVVTG 75
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D + ++ N E V + + H+ ++ + HPT + + S D IK+W D D
Sbjct: 76 ADDMQIRVFNY---NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW---DWD 129
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
W C Q GH+ + + N K ++ S S D TIK+W
Sbjct: 130 K-KWSCSQVFE----GHTHYVMQIVINPKDNNQFASASLDRTIKVW 170
Score = 55 (24.4 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 293 FFVESKDD-LIDGPSY--KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ + DD L+ Y K ++ + H +V+ + P E ++ + S+DG ++IW
Sbjct: 201 YLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 217 (81.4 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 136 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V +HP + ++ + S
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCASFHPELPIIITGSE 249
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 250 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 285
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 155 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + SF+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQTLE----GHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 263 LESTLNYGMERVWCVAS 279
Score = 136 (52.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V+S P+ + + ++ + C+W V T E + V++ + A + T
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHE--TQTLVKTFEVCDLPVRAAKFVARKNWVVTG 75
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D + ++ N E V + + H+ ++ + HPT + + S D IK+W D D
Sbjct: 76 ADDMQIRVFNY---NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW---DWD 129
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
W C Q GH+ + + N K ++ S S D TIK+W
Sbjct: 130 K-KWSCSQVFE----GHTHYVMQIVINPKDNNQFASASLDRTIKVW 170
Score = 55 (24.4 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 293 FFVESKDD-LIDGPSY--KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ + DD L+ Y K ++ + H +V+ + P E ++ + S+DG ++IW
Sbjct: 201 YLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 217 (81.4 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 136 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V +HP + ++ + S
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCASFHPELPIIITGSE 249
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 250 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 285
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 155 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + SF+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQTLE----GHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 263 LESTLNYGMERVWCVAS 279
Score = 136 (52.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V+S P+ + + ++ + C+W V T E + V++ + A + T
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHE--TQTLVKTFEVCDLPVRAAKFVARKNWVVTG 75
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D + ++ N E V + + H+ ++ + HPT + + S D IK+W D D
Sbjct: 76 ADDMQIRVFNY---NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW---DWD 129
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
W C Q GH+ + + N K ++ S S D TIK+W
Sbjct: 130 K-KWSCSQVFE----GHTHYVMQIVINPKDNNQFASASLDRTIKVW 170
Score = 55 (24.4 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 293 FFVESKDD-LIDGPSY--KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ + DD L+ Y K ++ + H +V+ + P E ++ + S+DG ++IW
Sbjct: 201 YLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIW 256
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 217 (81.4 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 136 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV L+GHAQ+V +HP + ++ + S
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTLEGHAQNVSCASFHPELPIIITGSE 249
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 250 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 285
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 155 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ GH+ + SF+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQTLE----GHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 263 LESTLNYGMERVWCVAS 279
Score = 136 (52.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
V+S P+ + + ++ + C+W V T E + V++ + A + T
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHE--TQTLVKTFEVCDLPVRAAKFVARKNWVVTG 75
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D + ++ N E V + + H+ ++ + HPT + + S D IK+W D D
Sbjct: 76 ADDMQIRVFNY---NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW---DWD 129
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
W C Q GH+ + + N K ++ S S D TIK+W
Sbjct: 130 K-KWSCSQVFE----GHTHYVMQIVINPKDNNQFASASLDRTIKVW 170
Score = 55 (24.4 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 293 FFVESKDD-LIDGPSY--KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ + DD L+ Y K ++ + H +V+ + P E ++ + S+DG ++IW
Sbjct: 201 YLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIW 256
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 150 (57.9 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 43/147 (29%), Positives = 64/147 (43%)
Query: 109 ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168
E V L H+NEV V ++ SG LAT D + IW+V+ N+ E L+ H V
Sbjct: 215 ETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSF 274
Query: 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228
V W P L +C +K+W D D T +N G T+ + ++ +
Sbjct: 275 VSWSPDDTKLLTCGNAEVLKLW-----DVDTGVLRHTFGNNNTGF--TVSSCAWFPDSTR 327
Query: 229 LVSCSDDLT--IKIWGADITRMQSGDG 253
LV S D I +W D +++ G
Sbjct: 328 LVCGSSDPERGIVMWDTDGNEIKAWRG 354
Score = 143 (55.4 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 33/79 (41%), Positives = 43/79 (54%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGT 131
H V +S SGK LATAS D T IW+ + + E TLE H+N V VSW+ T
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDT 282
Query: 132 LLATCGRDKSVWIWEVMPG 150
L TCG + + +W+V G
Sbjct: 283 KLLTCGNAEVLKLWDVDTG 301
Score = 111 (44.1 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 36/97 (37%), Positives = 47/97 (48%)
Query: 259 HLCTISGYHDRTI-FSVHWSREGIIAS--GAADDSVQFFVESKDDLIDGPSYKMLLKKEK 315
HL ++G + + FS H + +I S G D S F+ S + D Y LK K
Sbjct: 422 HLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSS---FIASGSE--DSQVYIWNLKNTK 476
Query: 316 ------AHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H M VN V W+P R+LASASDD I+IW
Sbjct: 477 PLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 83 (34.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 38/144 (26%), Positives = 56/144 (38%)
Query: 4 LDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
LDD EL+ TLE H + V ++W P D +C + +++W+
Sbjct: 254 LDDNKVELKH--TLESHQNPVSFVSWSP----DDTK--LLTCGNAEVLKLWDVDTGV--- 302
Query: 64 NCKAVLEEMHTR-TVRSCAWSPSGKLLATASFDATTCI--WEDVGGDYECVATLEGHENE 120
+ +T TV SCAW P L S D I W D G+ E A +
Sbjct: 303 -LRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMW-DTDGN-EIKAWRGTRIPK 359
Query: 121 VKSVSWNASGTLLATCGRDKSVWI 144
V ++ G + T DK + I
Sbjct: 360 VVDLAVTPDGESMITVFSDKEIRI 383
Score = 52 (23.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 334 LASASDDGMIKIWELANT 351
+AS S+D + IW L NT
Sbjct: 458 IASGSEDSQVYIWNLKNT 475
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 192 (72.6 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 74/248 (29%), Positives = 112/248 (45%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GK-LLATASFDA---- 96
A+CS DK V+IW +SR C V EE HT V C ++ G+ LLAT S D
Sbjct: 672 ATCSADKKVKIW----NSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKN 726
Query: 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156
T +W D+ Y C T+ GH N V ++ + +A+C D +V +W V NE +
Sbjct: 727 TVQLW-DLKDKY-CRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTI 784
Query: 157 SVLQ-----GHAQD-----VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 206
+ QD VK W + D + + N + ++ D + N I
Sbjct: 785 EIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVA-KNKLLLF---DVTTSNLLTQVII 840
Query: 207 SESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGA-DITRMQSGDGYASWRHLCTIS 264
S H STI F A GD+LV+ + +I++W ++++ G+ SW H T S
Sbjct: 841 S-----HHSTIQYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFS 894
Query: 265 GYHDRTIF 272
D ++F
Sbjct: 895 S--DGSLF 900
Score = 174 (66.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 46/154 (29%), Positives = 73/154 (47%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
ASC DKT+++++ + R A H + C +S K +AT S D IW
Sbjct: 630 ASCGADKTLQVFKAESGERLLEISA-----HDDEILCCTFSADDKYVATCSADKKVKIWN 684
Query: 103 DVGGDYECVATLEGHENEVKSVSWN-ASGT-LLATCGRD----KSVWIWEVMPGNEFECV 156
G +C+ E H +V +N G LLATC D +V +W++ +++ C
Sbjct: 685 SRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLK--DKY-CR 739
Query: 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
+ + GH V ++ P D + SCS D T+K+W
Sbjct: 740 NTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLW 773
Score = 166 (63.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 63/292 (21%), Positives = 125/292 (42%)
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
N ++ H V +S + +A+ D T +++ G E + + H++E+
Sbjct: 604 NLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESG--ERLLEISAHDDEILC 661
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSC 181
+++A +ATC DK V IW G +C+ V + H + V Q++ +L +C
Sbjct: 662 CTFSADDKYVATCSADKKVKIWNSRTG---KCLYVYEEHTEQVNCCQFNNRRGQYLLATC 718
Query: 182 SYD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237
S D NT+++W +D +C T+ GH + + F+ D + SCS D T
Sbjct: 719 SDDTYIKNTVQLWDLKDK-----YCRNTMF----GHVNAVSHCRFSPNDDYIASCSTDGT 769
Query: 238 IKIWGA-DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 296
+K+W +++ + +R+ + + WSR + D++ +
Sbjct: 770 VKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSR--------SSDTILVVAK 821
Query: 297 SKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+K L D + +L + +H + + G+ L+A A I++W +
Sbjct: 822 NKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDE-LVAVALSHCSIELWNI 872
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/155 (29%), Positives = 72/155 (46%)
Query: 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA--SSRFWNC 65
N++L E L+GH + + A+ + + S S D TV++W + + + + C
Sbjct: 1037 NWQLNECVFLKGHKEAIKDFAFLENSKL-------LSWSFDGTVKVWNITTGKTEKDFAC 1089
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
H V SCA SP G ++ S D T IW + L+GHE V+ +
Sbjct: 1090 -------HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSV--LHELKGHEACVRCSA 1140
Query: 126 WNASGTLLATCGRDKS-VWIWEVMPGNEFE-CVSV 158
++ S LLAT G DK + IW+++ G C SV
Sbjct: 1141 FSPSNKLLAT-GDDKGDIRIWDILTGELLHFCSSV 1174
Score = 122 (48.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 49/213 (23%), Positives = 96/213 (45%)
Query: 41 VFASCSGD----KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA 96
+ A+CS D TV++W+ ++ C+ + H V C +SP+ +A+ S D
Sbjct: 714 LLATCSDDTYIKNTVQLWD--LKDKY--CRNTMFG-HVNAVSHCRFSPNDDYIASCSTDG 768
Query: 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASG------TLLATCGRDKSVWIWEVMPG 150
T +W +V E + T+E +K NA L+ C +S V+
Sbjct: 769 TVKLW-NVHSANE-LRTIE-----IKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAK 821
Query: 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
N+ V + ++ H T+ C+ D + V + + W+ ++++S+
Sbjct: 822 NKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSH-CSIELWN-IKSLSKVA 879
Query: 211 N--GHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ GH+S + ++F++ G ++ S+D TI+IW
Sbjct: 880 DCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIW 912
Score = 122 (48.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 54/212 (25%), Positives = 87/212 (41%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
S + D +++W + C V + H ++ A+ + KLL+ SFD T +W
Sbjct: 1026 SSAHDAVIQVWNWQLNE----C--VFLKGHKEAIKDFAFLENSKLLSW-SFDGTVKVWNI 1078
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL---Q 160
G E H V S + + G+ ++ DK+ IW FE SVL +
Sbjct: 1079 TTGKTE--KDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWS------FESSSVLHELK 1130
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH-CVQ-TISESNNGHSSTIW 218
GH V+ + P+ +L + I++W + + H C T+ E H +
Sbjct: 1131 GHEACVRCSAFSPSNKLLATGDDKGDIRIW--DILTGELLHFCSSVTVDEEEPTHGGWVT 1188
Query: 219 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250
LSF+ LVS L K W D+T +S
Sbjct: 1189 DLSFSPDSKMLVSSGGYL--KWW--DVTTGES 1216
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 51/167 (30%), Positives = 74/167 (44%)
Query: 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTV 77
H V S A P DG F+S S DKT +IW +SS VL E+ H V
Sbjct: 1090 HRGAVLSCAVSP----DGSR--FSSTSADKTAKIWSFESSS-------VLHELKGHEACV 1136
Query: 78 RSCAWSPSGKLLATASFDATTCIWEDVGGD--YECVA-TLEG----HENEVKSVSWNASG 130
R A+SPS KLLAT IW+ + G+ + C + T++ H V +S++
Sbjct: 1137 RCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDS 1196
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177
+L + G W W+V G E + + ++K + P DV
Sbjct: 1197 KMLVSSGGYLK-W-WDVTTG---ESLQTFYTNGTNLKSIHVSPNFDV 1238
Score = 74 (31.1 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 272 FSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKM--LLKKEKAHDMDVNSVQWSPG 329
F+ H R +++ + D +F S D S++ +L + K H+ V +SP
Sbjct: 1087 FACH--RGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPS 1144
Query: 330 ERRLLASASDDGMIKIWEL 348
+ LLA+ D G I+IW++
Sbjct: 1145 NK-LLATGDDKGDIRIWDI 1162
Score = 56 (24.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE 55
L ++ GHT V + T DG +F + S D+T+RIWE
Sbjct: 875 LSKVADCRGHTSWVHCV----TFSSDG--SLFLTSSEDQTIRIWE 913
Score = 46 (21.3 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 315 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+ H V+ V +S + L ++S+D I+IWE
Sbjct: 882 RGHTSWVHCVTFS-SDGSLFLTSSEDQTIRIWE 913
Score = 42 (19.8 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 330 ERRLLASASDDGMIKIWEL 348
E L S S DG +K+W +
Sbjct: 1060 ENSKLLSWSFDGTVKVWNI 1078
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 208 (78.3 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 74/261 (28%), Positives = 113/261 (43%)
Query: 8 NYELRE-IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY E I + E H D + S+A PT P + S D T+++W+ W C
Sbjct: 83 NYNTSEKIASFEAHPDYIRSIAVHPTQ------PFVLTASDDMTIKLWDWEKG---WKCV 133
Query: 67 AVLEEMHTRTVRSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENE-VKSV 124
V E H+ V A +P A+A D T IW +G + TLE HE + V V
Sbjct: 134 QVYEG-HSHYVMGLAINPKDTNTFASACLDRTVKIWS-LGSPHANF-TLEAHETKGVNHV 190
Query: 125 SW--NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182
+ A L T DK+V +W+ ++ L+GH +V +HP + V+ S S
Sbjct: 191 DYYPQADKPYLLTTSDDKTVKVWDYTTK---ALIATLEGHTSNVSFACYHPELPVIISGS 247
Query: 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DD--LTIK 239
D TIK+W A + + Q++S W +S+ +G + V+ DD + +K
Sbjct: 248 EDGTIKIWHA-----NTYRLEQSLSYG----LERAWCVSYQ-RGKQGVALGFDDGAVVVK 297
Query: 240 IWGADITRMQSGDGYASW-RH 259
+ + G G W RH
Sbjct: 298 MGREEPAVSMDGSGKIVWARH 318
Score = 188 (71.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 64/221 (28%), Positives = 103/221 (46%)
Query: 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG 105
S D +RI+ + S + + +A H +RS A P+ + TAS D T +W+
Sbjct: 74 SDDFQLRIYNYNTSEKIASFEA-----HPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEK 128
Query: 106 GDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEV-MPGNEFECVSVLQGH- 162
G ++CV EGH + V ++ N T A+ D++V IW + P F L+ H
Sbjct: 129 G-WKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANF----TLEAHE 183
Query: 163 AQDVKMVQWHPTMD--VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
+ V V ++P D L + S D T+KVW D + T+ GH+S +
Sbjct: 184 TKGVNHVDYYPQADKPYLLTTSDDKTVKVW-----DYTTKALIATLE----GHTSNVSFA 234
Query: 221 SFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLC 261
++ + ++S S+D TIKIW A+ R++ Y R C
Sbjct: 235 CYHPELPVIISGSEDGTIKIWHANTYRLEQSLSYGLERAWC 275
Score = 51 (23.0 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 273 SVHWSREGIIASGAADDSVQFFVESKDDLIDG 304
+V+WS G + + A DD+ S+++ I+G
Sbjct: 468 NVYWSESGELVTLACDDTFYVLRFSRENYING 499
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 66/235 (28%), Positives = 112/235 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++T++ H +WS++ P G F + DK+V+ W+ + + L
Sbjct: 489 LETIDAHDGALWSMSLSPDQR--G----FVTGGADKSVKFWDFELVKDENSTQKRLSVKQ 542
Query: 74 TRTVRS-----C-AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
TRT++ C ++SP+ KLLA + D T I+ + +L GH+ V + +
Sbjct: 543 TRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIF--YVDTLKFFLSLYGHKLPVICMDIS 600
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
G L+AT D++V IW G +F +C L H V +Q+ P + F+ D+
Sbjct: 601 HDGALIATGSADRNVKIW----GLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHK 656
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
IK W D+D + +QT+ GH IW L+ + GD +VS S D ++++W
Sbjct: 657 IKQW-----DADKFEHIQTLE----GHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 153 (58.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 50/215 (23%), Positives = 96/215 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRF-WNCKA-----VLEEMHTRTVRSCAWSPSGKLLATASF 94
VF + G+K + + F W+ + +L+ + C SP G LA
Sbjct: 27 VFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCP-SPDGLHLAVGYE 85
Query: 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154
D + I+ + G+ T GH+ + ++ ++ G LA+ +D + +W+V+ NE
Sbjct: 86 DGSIRIFSLLSGEGN--VTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVI--NESG 141
Query: 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+GH + + ++L + D +K WW D D HC +T+ GH
Sbjct: 142 LYR-LKGHKDAITQALFLREKNLLVTSGKDTMVK-WW----DLDTQHCFKTMV----GHR 191
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
+ +W L ++ +L++ + D +++W DI +Q
Sbjct: 192 TEVWGLVLLSEEKRLITGASDSELRVW--DIAYLQ 224
Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 293 FFVESKDDLI---DGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASASDDGMIKIWE 347
FF KD I D ++ + E H ++ + SP G+ + S+S D +++WE
Sbjct: 648 FFTAGKDHKIKQWDADKFEHIQTLE-GHHQEIWCLAVSPSGD--YVVSSSHDKSLRLWE 703
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 211 (79.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 65/233 (27%), Positives = 108/233 (46%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
LR + L GH R+ + + P+ G S S D T R+W+ S +L+
Sbjct: 255 LRLLGDLVGHERRISDVKYHPSGKFIG------SASHDMTWRLWDASTHQEL-----LLQ 303
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
E H + V S ++ G L+ + D+ + +W+ G V TL GH + +V+W+ +G
Sbjct: 304 EGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSK--VMTLAGHSKPIYTVAWSPNG 361
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTIK 188
+AT G D + +W++ +E + +L H V V++ L SC YDN I
Sbjct: 362 YQVATGGGDGIINVWDIRKRDEGQLNQIL-AHRNIVTQVRFSKEDGGKKLVSCGYDNLIN 420
Query: 189 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
V+ SD W + +++ GH+ I +L + LVS D +IK+W
Sbjct: 421 VY-----SSDTWLKMGSLA----GHTDKIISLDISNNSHFLVSGGWDRSIKLW 464
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 67/283 (23%), Positives = 127/283 (44%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
Q L+ H ++ ++ W P + + SC+ D ++ ++ S L H
Sbjct: 212 QKLDSHVGKIGAIDWHPDSNNQMI-----SCAEDGLIKNFQYSNEEGGLRLLGDLVG-HE 265
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
R + + PSGK + +AS D T +W+ ++ + EGH+ V S+S+ G+L+
Sbjct: 266 RRISDVKYHPSGKFIGSASHDMTWRLWD--ASTHQELLLQEGHDKGVFSLSFQCDGSLVC 323
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAED 194
+ G D +W++ G++ V L GH++ + V W P + + D I VW
Sbjct: 324 SGGMDSLSMLWDIRSGSK---VMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRK 380
Query: 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAK--GDKLVSCSDDLTIKIWGADITRMQSGD 252
D + Q ++ H + + + F+ + G KLVSC D I ++ +D
Sbjct: 381 RDEGQLN--QILA-----HRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSD-------- 425
Query: 253 GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294
+W + +++G+ D+ I S+ S + SG D S++ +
Sbjct: 426 ---TWLKMGSLAGHTDK-IISLDISNNSHFLVSGGWDRSIKLW 464
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 199 (75.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 55/192 (28%), Positives = 90/192 (46%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS 60
+E+++ N + + HTD V+ + DG ASC DKT+++++
Sbjct: 331 LEWINKKNIKNLSRLVVRPHTDAVYHACFSE----DGQR--IASCGADKTLQVFKAETGE 384
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120
+ KA H V CA+S + +AT S D IW V G E V + + H +
Sbjct: 385 KLLEIKA-----HEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTG--ELVQSYDEHSEQ 437
Query: 121 VKSVSW--NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
V + N++ LLAT D + +W++ N+ EC + + GH V ++ P +L
Sbjct: 438 VNCCHFTNNSNHLLLATGSSDYFLKLWDL---NQKECRNTMFGHTNSVSHCRFSPDDKLL 494
Query: 179 FSCSYDNTIKVW 190
SCS D T+K+W
Sbjct: 495 ASCSADGTLKLW 506
Score = 158 (60.7 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 57/235 (24%), Positives = 98/235 (41%)
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
N ++ HT V +S G+ +A+ D T +++ G E + ++ HE+EV
Sbjct: 341 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETG--EKLLEIKAHEDEVLC 398
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSC 181
+++A +ATC DK V IW + G E V H++ V + + +L +
Sbjct: 399 CAFSADDRFIATCSVDKKVKIWNSVTG---ELVQSYDEHSEQVNCCHFTNNSNHLLLATG 455
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D +K+W D + C T+ GH++++ F+ L SCS D T+K+W
Sbjct: 456 SSDYFLKLW-----DLNQKECRNTMF----GHTNSVSHCRFSPDDKLLASCSADGTLKLW 506
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIF--SVHWSREGIIASGAADDSVQFF 294
+ + L + D + WS +G AA + V F
Sbjct: 507 DVKSANERKSINVKQF-FLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLF 560
Score = 155 (59.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 54/187 (28%), Positives = 85/187 (45%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK--LLATASFDATTCI 100
A+CS DK V+IW + +E H+ V C ++ + LLAT S D +
Sbjct: 409 ATCSVDKKVKIWNSVTGELVQS----YDE-HSEQVNCCHFTNNSNHLLLATGSSDYFLKL 463
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W D+ EC T+ GH N V ++ LLA+C D ++ +W+V NE + ++V Q
Sbjct: 464 W-DLN-QKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQ 521
Query: 161 GHAQDVKMVQWHPTMDVLFSC---SYDNTIKVWWAEDTDS-DNWHCVQTISESNNGHSST 216
+ + M+V+ C S D V A++ N H ++E + GH ST
Sbjct: 522 FFLNSEESQE---DMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHTGHHST 578
Query: 217 IWALSFN 223
I F+
Sbjct: 579 IQYCDFS 585
Score = 108 (43.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 55/232 (23%), Positives = 98/232 (42%)
Query: 117 HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176
H+N V+ + + G + + D ++ +W +E E VS LQ H + VK +
Sbjct: 747 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQ--SE-ETVS-LQAHQETVKDFRLLKNSR 802
Query: 177 VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236
+L S S+D T+KVW N I + H T+ + + K S S D
Sbjct: 803 LL-SWSFDGTVKVW--------NI-ITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADK 852
Query: 237 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 296
T KIW D+ + L G + FSV + ++A+G + ++ +
Sbjct: 853 TAKIWSFDLL--------SPLHELRGHKGCVRCSAFSVDST---LLATGDDNGEIRIWNV 901
Query: 297 SKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
S +L+ + ++ H V +++SP + ++L SA G +K W +
Sbjct: 902 SNGELLHSCAPVLVEGGAATHGGWVTDLRFSP-DGKMLVSAG--GYLKWWNV 950
Score = 101 (40.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 40/150 (26%), Positives = 66/150 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE-QSASSR--------FWNCK 66
T+ GHT+ V + P D + ASCS D T+++W+ +SA+ R F N +
Sbjct: 474 TMFGHTNSVSHCRFSPD---D---KLLASCSADGTLKLWDVKSANERKSINVKQFFLNSE 527
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
E+M V+ C+WS G L A+ + GG + T GH + ++ +
Sbjct: 528 ESQEDMEVM-VKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHT--GHHSTIQYCDF 584
Query: 127 NASGTLLAT-----CGRDKSVWIWEVMPGN 151
+ S L C + +IW +PG+
Sbjct: 585 SPSNHLAVVALSQYCVEKRGKFIW--LPGS 612
Score = 79 (32.9 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 21/100 (21%), Positives = 44/100 (44%)
Query: 146 EVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT 205
+V G EF C+ + + + + + P + SC T + + D + ++
Sbjct: 678 KVATGEEF-CLQIKRAASPQKRKKKMIPDQSFMVSC-IQGTSECFVLGDVYGHSLKVLEL 735
Query: 206 IS----ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
++ +S H +T+ + F G ++S SDD I++W
Sbjct: 736 LNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVW 775
Score = 62 (26.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKML--LKKEKAHDMDVNSVQWSPGERRLLA 335
++ +++ + D+ +F S D S+ +L L + + H V +S + LLA
Sbjct: 830 QDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSV-DSTLLA 888
Query: 336 SASDDGMIKIWELAN 350
+ D+G I+IW ++N
Sbjct: 889 TGDDNGEIRIWNVSN 903
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNC--KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
FA+CS D TVRIW+ F C + +L H V+ W P+ L+ + S D+
Sbjct: 217 FATCSDDGTVRIWD------FLRCHEERILRG-HGADVKCVDWHPTKGLVVSGSKDSQQP 269
Query: 100 I--WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
I W+ G + +ATL H+N V V N +G L T RD ++++ N E +
Sbjct: 270 IKFWDPKTG--QSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR--NLKEELQ 325
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
V +GH ++ V WHP + LF+ + ++W + + + H I
Sbjct: 326 VFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE-------VGGMEMAHEGMI 378
Query: 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
W+L+++ G L S S+D T K W TR + GD
Sbjct: 379 WSLAWHPLGHILCSGSNDHTSKFW----TRNRPGD 409
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+G V + SG+ T +W + +N + +L+ H VR+ WS + + TA
Sbjct: 130 EGRRLVTGASSGEFT--LW----NGLTFNFETILQA-HDSPVRAMTWSHNDMWMLTADHG 182
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
W+ + V + H+ ++ S++ + ATC D +V IW+ + +E
Sbjct: 183 GYVKYWQS---NMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEER- 238
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGH 213
+L+GH DVK V WHPT ++ S S D+ IK W D + T+ + H
Sbjct: 239 --ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-----DPKTGQSLATL----HAH 287
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIF 272
+T+ + N G+ L++ S D K++ DI ++ + + T +H
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF--DIRNLKEELQVFRGHKKEATAVAWHP---- 341
Query: 273 SVHWSREGIIASGAADDSVQFF 294
VH EG+ ASG +D S+ F+
Sbjct: 342 -VH---EGLFASGGSDGSLLFW 359
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/179 (29%), Positives = 74/179 (41%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + L GH V + W PT G+ V S + ++ W+ A L
Sbjct: 236 EERILRGHGADVKCVDWHPTKGL----VVSGSKDSQQPIKFWDPKTGQSL----ATLHA- 286
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGT 131
H TV + +G L TAS D C D+ E + GH+ E +V+W+
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHL-CKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L A+ G D S+ W V G E E + H + + WHP +L S S D+T K W
Sbjct: 346 LFASGGSDGSLLFWHV--GVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFW 402
Score = 137 (53.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
W+P G+ L T + +W + ++E + L+ H++ V++++W+ + + T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFETI--LQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
V W+ N V + Q H + ++ + PT + +CS D T+++W D
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW-------DFLR 233
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT--IKIW 241
C + GH + + + ++ +VS S D IK W
Sbjct: 234 CHE--ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW 273
Score = 75 (31.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 267 HDRTIFSVHWS--REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
H + +V W EG+ ASG +D S+ F+ + + G E AH+ + S+
Sbjct: 330 HKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGG--------MEMAHEGMIWSL 381
Query: 325 QWSPGERRLLASASDDGMIKIW 346
W P +L S S+D K W
Sbjct: 382 AWHP-LGHILCSGSNDHTSKFW 402
Score = 65 (27.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
L D + K L+ + H + +V W P L AS DG + W +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNC--KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
FA+CS D TVRIW+ F C + +L H V+ W P+ L+ + S D+
Sbjct: 213 FATCSDDGTVRIWD------FLRCHEERILRG-HGADVKCVDWHPTKGLVVSGSKDSQQP 265
Query: 100 I--WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
I W+ G + +ATL H+N V V N +G L T RD ++++ N E +
Sbjct: 266 IKFWDPKTG--QSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR--NLKEELQ 321
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
V +GH ++ V WHP + LF+ + ++W + + + H I
Sbjct: 322 VFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE-------VGGMEMAHEGMI 374
Query: 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
W+L+++ G L S S+D T K W TR + GD
Sbjct: 375 WSLAWHPLGHILCSGSNDHTSKFW----TRNRPGD 405
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+G V + SG+ T +W + +N + +L+ H VR+ WS + + TA
Sbjct: 126 EGRRLVTGASSGEFT--LW----NGLTFNFETILQA-HDSPVRAMTWSHNDMWMLTADHG 178
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
W+ + V + H+ ++ S++ + ATC D +V IW+ + +E
Sbjct: 179 GYVKYWQS---NMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEER- 234
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGH 213
+L+GH DVK V WHPT ++ S S D+ IK W D + T+ + H
Sbjct: 235 --ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-----DPKTGQSLATL----HAH 283
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIF 272
+T+ + N G+ L++ S D K++ DI ++ + + T +H
Sbjct: 284 KNTVMEVKLNLNGNWLLTASRDHLCKLF--DIRNLKEELQVFRGHKKEATAVAWHP---- 337
Query: 273 SVHWSREGIIASGAADDSVQFF 294
VH EG+ ASG +D S+ F+
Sbjct: 338 -VH---EGLFASGGSDGSLLFW 355
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/179 (29%), Positives = 74/179 (41%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + L GH V + W PT G+ V S + ++ W+ A L
Sbjct: 232 EERILRGHGADVKCVDWHPTKGL----VVSGSKDSQQPIKFWDPKTGQSL----ATLHA- 282
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGT 131
H TV + +G L TAS D C D+ E + GH+ E +V+W+
Sbjct: 283 HKNTVMEVKLNLNGNWLLTASRDHL-CKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 341
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L A+ G D S+ W V G E E + H + + WHP +L S S D+T K W
Sbjct: 342 LFASGGSDGSLLFWHV--GVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFW 398
Score = 137 (53.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
W+P G+ L T + +W + ++E + L+ H++ V++++W+ + + T
Sbjct: 123 WTPEGRRLVTGASSGEFTLWNGLTFNFETI--LQAHDSPVRAMTWSHNDMWMLTADHGGY 180
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
V W+ N V + Q H + ++ + PT + +CS D T+++W D
Sbjct: 181 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW-------DFLR 229
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT--IKIW 241
C + GH + + + ++ +VS S D IK W
Sbjct: 230 CHE--ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW 269
Score = 75 (31.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 267 HDRTIFSVHWS--REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
H + +V W EG+ ASG +D S+ F+ + + G E AH+ + S+
Sbjct: 326 HKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGG--------MEMAHEGMIWSL 377
Query: 325 QWSPGERRLLASASDDGMIKIW 346
W P +L S S+D K W
Sbjct: 378 AWHP-LGHILCSGSNDHTSKFW 398
Score = 65 (27.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
L D + K L+ + H + +V W P L AS DG + W +
Sbjct: 310 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 357
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNC--KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
FA+CS D TVRIW+ F C + +L H V+ W P+ L+ + S D+
Sbjct: 217 FATCSDDGTVRIWD------FLRCHEERILRG-HGADVKCVDWHPTKGLVVSGSKDSQQP 269
Query: 100 I--WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
I W+ G + +ATL H+N V V N +G L T RD ++++ N E +
Sbjct: 270 IKFWDPKTG--QSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR--NLKEELQ 325
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
V +GH ++ V WHP + LF+ + ++W + + + H I
Sbjct: 326 VFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE-------VGGMEMAHEGMI 378
Query: 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
W+L+++ G L S S+D T K W TR + GD
Sbjct: 379 WSLAWHPLGHILCSGSNDHTSKFW----TRNRPGD 409
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+G V + SG+ T +W + +N + +L+ H VR+ WS + + TA
Sbjct: 130 EGRRLVTGASSGEFT--LW----NGLTFNFETILQA-HDSPVRAMTWSHNDMWMLTADHG 182
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
W+ + V + H+ ++ S++ + ATC D +V IW+ + +E
Sbjct: 183 GYVKYWQS---NMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEER- 238
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGH 213
+L+GH DVK V WHPT ++ S S D+ IK W D + T+ + H
Sbjct: 239 --ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-----DPKTGQSLATL----HAH 287
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIF 272
+T+ + N G+ L++ S D K++ DI ++ + + T +H
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF--DIRNLKEELQVFRGHKKEATAVAWHP---- 341
Query: 273 SVHWSREGIIASGAADDSVQFF 294
VH EG+ ASG +D S+ F+
Sbjct: 342 -VH---EGLFASGGSDGSLLFW 359
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/179 (29%), Positives = 74/179 (41%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + L GH V + W PT G+ V S + ++ W+ A L
Sbjct: 236 EERILRGHGADVKCVDWHPTKGL----VVSGSKDSQQPIKFWDPKTGQSL----ATLHA- 286
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGT 131
H TV + +G L TAS D C D+ E + GH+ E +V+W+
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHL-CKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L A+ G D S+ W V G E E + H + + WHP +L S S D+T K W
Sbjct: 346 LFASGGSDGSLLFWHV--GVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFW 402
Score = 137 (53.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
W+P G+ L T + +W + ++E + L+ H++ V++++W+ + + T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFETI--LQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
V W+ N V + Q H + ++ + PT + +CS D T+++W D
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW-------DFLR 233
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT--IKIW 241
C + GH + + + ++ +VS S D IK W
Sbjct: 234 CHE--ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW 273
Score = 75 (31.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 267 HDRTIFSVHWS--REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
H + +V W EG+ ASG +D S+ F+ + + G E AH+ + S+
Sbjct: 330 HKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGG--------MEMAHEGMIWSL 381
Query: 325 QWSPGERRLLASASDDGMIKIW 346
W P +L S S+D K W
Sbjct: 382 AWHP-LGHILCSGSNDHTSKFW 402
Score = 65 (27.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
L D + K L+ + H + +V W P L AS DG + W +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNC--KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
FA+CS D TVRIW+ F C + +L H V+ W P+ L+ + S D+
Sbjct: 217 FATCSDDGTVRIWD------FLRCHEERILRG-HGADVKCVDWHPTKGLVVSGSKDSQQP 269
Query: 100 I--WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
I W+ G + +ATL H+N V V N +G L T RD ++++ N E +
Sbjct: 270 IKFWDPKTG--QSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR--NLKEELQ 325
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
V +GH ++ V WHP + LF+ + ++W + + + H I
Sbjct: 326 VFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE-------VGGMEMAHEGMI 378
Query: 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
W+L+++ G L S S+D T K W TR + GD
Sbjct: 379 WSLAWHPLGHILCSGSNDHTSKFW----TRNRPGD 409
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+G V + SG+ T +W + +N + +L+ H VR+ WS + + TA
Sbjct: 130 EGRRLVTGASSGEFT--LW----NGLTFNFETILQA-HDSPVRAMTWSHNDMWMLTADHG 182
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
W+ + V + H+ ++ S++ + ATC D +V IW+ + +E
Sbjct: 183 GYVKYWQS---NMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEER- 238
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGH 213
+L+GH DVK V WHPT ++ S S D+ IK W D + T+ + H
Sbjct: 239 --ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-----DPKTGQSLATL----HAH 287
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIF 272
+T+ + N G+ L++ S D K++ DI ++ + + T +H
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF--DIRNLKEELQVFRGHKKEATAVAWHP---- 341
Query: 273 SVHWSREGIIASGAADDSVQFF 294
VH EG+ ASG +D S+ F+
Sbjct: 342 -VH---EGLFASGGSDGSLLFW 359
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/179 (29%), Positives = 74/179 (41%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + L GH V + W PT G+ V S + ++ W+ A L
Sbjct: 236 EERILRGHGADVKCVDWHPTKGL----VVSGSKDSQQPIKFWDPKTGQSL----ATLHA- 286
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGT 131
H TV + +G L TAS D C D+ E + GH+ E +V+W+
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHL-CKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L A+ G D S+ W V G E E + H + + WHP +L S S D+T K W
Sbjct: 346 LFASGGSDGSLLFWHV--GVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFW 402
Score = 137 (53.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
W+P G+ L T + +W + ++E + L+ H++ V++++W+ + + T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFETI--LQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
V W+ N V + Q H + ++ + PT + +CS D T+++W D
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW-------DFLR 233
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT--IKIW 241
C + GH + + + ++ +VS S D IK W
Sbjct: 234 CHE--ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW 273
Score = 75 (31.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 267 HDRTIFSVHWS--REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
H + +V W EG+ ASG +D S+ F+ + + G E AH+ + S+
Sbjct: 330 HKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGG--------MEMAHEGMIWSL 381
Query: 325 QWSPGERRLLASASDDGMIKIW 346
W P +L S S+D K W
Sbjct: 382 AWHP-LGHILCSGSNDHTSKFW 402
Score = 65 (27.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
L D + K L+ + H + +V W P L AS DG + W +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNC--KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
FA+CS D TVRIW+ F C + +L H V+ W P+ L+ + S D+
Sbjct: 217 FATCSDDGTVRIWD------FLRCHEERILRG-HGADVKCVDWHPTKGLVVSGSKDSQQP 269
Query: 100 I--WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
I W+ G + +ATL H+N V V N +G L T RD ++++ N E +
Sbjct: 270 IKFWDPKTG--QSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR--NLKEELQ 325
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
V +GH ++ V WHP + LF+ + ++W + + + H I
Sbjct: 326 VFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE-------VGGMEMAHEGMI 378
Query: 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
W+L+++ G L S S+D T K W TR + GD
Sbjct: 379 WSLAWHPLGHILCSGSNDHTSKFW----TRNRPGD 409
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+G V + SG+ T +W + +N + +L+ H VR+ WS + + TA
Sbjct: 130 EGRRLVTGASSGEFT--LW----NGLTFNFETILQA-HDSPVRAMTWSHNDMWMLTADHG 182
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
W+ + V + H+ ++ S++ + ATC D +V IW+ + +E
Sbjct: 183 GYVKYWQS---NMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEER- 238
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGH 213
+L+GH DVK V WHPT ++ S S D+ IK W D + T+ + H
Sbjct: 239 --ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-----DPKTGQSLATL----HAH 287
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIF 272
+T+ + N G+ L++ S D K++ DI ++ + + T +H
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF--DIRNLKEELQVFRGHKKEATAVAWHP---- 341
Query: 273 SVHWSREGIIASGAADDSVQFF 294
VH EG+ ASG +D S+ F+
Sbjct: 342 -VH---EGLFASGGSDGSLLFW 359
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/179 (29%), Positives = 74/179 (41%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + L GH V + W PT G+ V S + ++ W+ A L
Sbjct: 236 EERILRGHGADVKCVDWHPTKGL----VVSGSKDSQQPIKFWDPKTGQSL----ATLHA- 286
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGT 131
H TV + +G L TAS D C D+ E + GH+ E +V+W+
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHL-CKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L A+ G D S+ W V G E E + H + + WHP +L S S D+T K W
Sbjct: 346 LFASGGSDGSLLFWHV--GVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFW 402
Score = 137 (53.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
W+P G+ L T + +W + ++E + L+ H++ V++++W+ + + T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFETI--LQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
V W+ N V + Q H + ++ + PT + +CS D T+++W D
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW-------DFLR 233
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT--IKIW 241
C + GH + + + ++ +VS S D IK W
Sbjct: 234 CHE--ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW 273
Score = 75 (31.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 267 HDRTIFSVHWS--REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
H + +V W EG+ ASG +D S+ F+ + + G E AH+ + S+
Sbjct: 330 HKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGG--------MEMAHEGMIWSL 381
Query: 325 QWSPGERRLLASASDDGMIKIW 346
W P +L S S+D K W
Sbjct: 382 AWHP-LGHILCSGSNDHTSKFW 402
Score = 65 (27.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
L D + K L+ + H + +V W P L AS DG + W +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNC--KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
FA+CS D TVRIW+ F C + +L H V+ W P+ L+ + S D+
Sbjct: 217 FATCSDDGTVRIWD------FLRCHEERILRG-HGADVKCVDWHPTKGLVVSGSKDSQQP 269
Query: 100 I--WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
I W+ G + +ATL H+N V V N +G L T RD ++++ N E +
Sbjct: 270 IKFWDPKTG--QSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR--NLKEELQ 325
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
V +GH ++ V WHP + LF+ + ++W + + + H I
Sbjct: 326 VFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE-------VGGMEMAHEGMI 378
Query: 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
W+L+++ G L S S+D T K W TR + GD
Sbjct: 379 WSLAWHPLGHILCSGSNDHTSKFW----TRNRPGD 409
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+G V + SG+ T +W + +N + +L+ H VR+ WS + + TA
Sbjct: 130 EGRRLVTGASSGEFT--LW----NGLTFNFETILQA-HDSPVRAMTWSHNDMWMLTADHG 182
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
W+ + V + H+ ++ S++ + ATC D +V IW+ + +E
Sbjct: 183 GYVKYWQS---NMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEER- 238
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGH 213
+L+GH DVK V WHPT ++ S S D+ IK W D + T+ + H
Sbjct: 239 --ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-----DPKTGQSLATL----HAH 287
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIF 272
+T+ + N G+ L++ S D K++ DI ++ + + T +H
Sbjct: 288 KNTVMEVKLNLNGNWLLTASRDHLCKLF--DIRNLKEELQVFRGHKKEATAVAWHP---- 341
Query: 273 SVHWSREGIIASGAADDSVQFF 294
VH EG+ ASG +D S+ F+
Sbjct: 342 -VH---EGLFASGGSDGSLLFW 359
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/179 (29%), Positives = 74/179 (41%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + L GH V + W PT G+ V S + ++ W+ A L
Sbjct: 236 EERILRGHGADVKCVDWHPTKGL----VVSGSKDSQQPIKFWDPKTGQSL----ATLHA- 286
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGT 131
H TV + +G L TAS D C D+ E + GH+ E +V+W+
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHL-CKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L A+ G D S+ W V G E E + H + + WHP +L S S D+T K W
Sbjct: 346 LFASGGSDGSLLFWHV--GVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFW 402
Score = 137 (53.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
W+P G+ L T + +W + ++E + L+ H++ V++++W+ + + T
Sbjct: 127 WTPEGRRLVTGASSGEFTLWNGLTFNFETI--LQAHDSPVRAMTWSHNDMWMLTADHGGY 184
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
V W+ N V + Q H + ++ + PT + +CS D T+++W D
Sbjct: 185 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW-------DFLR 233
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT--IKIW 241
C + GH + + + ++ +VS S D IK W
Sbjct: 234 CHE--ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW 273
Score = 75 (31.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 267 HDRTIFSVHWS--REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
H + +V W EG+ ASG +D S+ F+ + + G E AH+ + S+
Sbjct: 330 HKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGG--------MEMAHEGMIWSL 381
Query: 325 QWSPGERRLLASASDDGMIKIW 346
W P +L S S+D K W
Sbjct: 382 AWHP-LGHILCSGSNDHTSKFW 402
Score = 65 (27.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
L D + K L+ + H + +V W P L AS DG + W +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 217 (81.4 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 42 FASCSGDKTVRIWEQSASSRFWNC--KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99
FA+CS D TVRIW+ F C + +L H V+ W P+ L+ + S D+
Sbjct: 218 FATCSDDGTVRIWD------FLRCHEERILRG-HGADVKCVDWHPTKGLVVSGSKDSQQP 270
Query: 100 I--WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157
I W+ G + +ATL H+N V V N +G L T RD ++++ N E +
Sbjct: 271 IKFWDPKTG--QSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR--NLKEELQ 326
Query: 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
V +GH ++ V WHP + LF+ + ++W + + + H I
Sbjct: 327 VFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKE-------VGGMEMAHEGMI 379
Query: 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
W+L+++ G L S S+D T K W TR + GD
Sbjct: 380 WSLAWHPLGHILCSGSNDHTSKFW----TRNRPGD 410
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95
+G V + SG+ T +W + +N + +L+ H VR+ WS + + TA
Sbjct: 131 EGRRLVTGASSGEFT--LW----NGLTFNFETILQA-HDSPVRAMTWSHNDMWMLTADHG 183
Query: 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155
W+ + V + H+ ++ S++ + ATC D +V IW+ + +E
Sbjct: 184 GYVKYWQS---NMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEER- 239
Query: 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGH 213
+L+GH DVK V WHPT ++ S S D+ IK W D + T+ + H
Sbjct: 240 --ILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW-----DPKTGQSLATL----HAH 288
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-DGYASWRHLCTISGYHDRTIF 272
+T+ + N G+ L++ S D K++ DI ++ + + T +H
Sbjct: 289 KNTVMEVKLNLNGNWLLTASRDHLCKLF--DIRNLKEELQVFRGHKKEATAVAWHP---- 342
Query: 273 SVHWSREGIIASGAADDSVQFF 294
VH EG+ ASG +D S+ F+
Sbjct: 343 -VH---EGLFASGGSDGSLLFW 360
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 52/179 (29%), Positives = 74/179 (41%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + L GH V + W PT G+ V S + ++ W+ A L
Sbjct: 237 EERILRGHGADVKCVDWHPTKGL----VVSGSKDSQQPIKFWDPKTGQSL----ATLHA- 287
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGT 131
H TV + +G L TAS D C D+ E + GH+ E +V+W+
Sbjct: 288 HKNTVMEVKLNLNGNWLLTASRDHL-CKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 346
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
L A+ G D S+ W V G E E + H + + WHP +L S S D+T K W
Sbjct: 347 LFASGGSDGSLLFWHV--GVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFW 403
Score = 137 (53.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
W+P G+ L T + +W + ++E + L+ H++ V++++W+ + + T
Sbjct: 128 WTPEGRRLVTGASSGEFTLWNGLTFNFETI--LQAHDSPVRAMTWSHNDMWMLTADHGGY 185
Query: 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201
V W+ N V + Q H + ++ + PT + +CS D T+++W D
Sbjct: 186 VKYWQSNMNN----VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIW-------DFLR 234
Query: 202 CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT--IKIW 241
C + GH + + + ++ +VS S D IK W
Sbjct: 235 CHE--ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW 274
Score = 75 (31.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 267 HDRTIFSVHWS--REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
H + +V W EG+ ASG +D S+ F+ + + G E AH+ + S+
Sbjct: 331 HKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGG--------MEMAHEGMIWSL 382
Query: 325 QWSPGERRLLASASDDGMIKIW 346
W P +L S S+D K W
Sbjct: 383 AWHP-LGHILCSGSNDHTSKFW 403
Score = 65 (27.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
L D + K L+ + H + +V W P L AS DG + W +
Sbjct: 315 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 362
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 203 (76.5 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 54/165 (32%), Positives = 81/165 (49%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+ S A+SP GK LA+ + D I++ G + + TLEGH ++S++++ LL T
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATG--KLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D + I++V N L GH V V + P S S D +IKVW DT
Sbjct: 209 SDDGYIKIYDVQHAN---LAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVW---DTS 262
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S + CV T + H +W++ +N G K+VS DD I I+
Sbjct: 263 SRS--CVNTFFD----HQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 34/133 (25%), Positives = 64/133 (48%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TLEGH + SL + P + + + S D ++I++ + N L H
Sbjct: 183 LHTLEGHAMPIRSLTFSPDS------QLLVTASDDGYIKIYDVQHA----NLAGTLSG-H 231
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
V S A+SP ++S D + +W+ CV T H+++V SV +N +G+ +
Sbjct: 232 GSWVLSVAFSPDDTHFVSSSSDKSIKVWDT--SSRSCVNTFFDHQDQVWSVKYNPTGSKI 289
Query: 134 ATCGRDKSVWIWE 146
+ G D+++ I++
Sbjct: 290 VSAGDDRAIHIYD 302
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 199 (75.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 70/270 (25%), Positives = 117/270 (43%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS 60
+E+++ N + + HTD V+ + DG ASC DKT+++++
Sbjct: 603 LEWINKKNIKNLSRLVVRPHTDAVYHACFSE----DGQR--IASCGVDKTLQVFKAETGE 656
Query: 61 RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120
+ KA H V CA+S + +AT S D IW + G V + H +
Sbjct: 657 KLLEIKA-----HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGL--VHVYDEHSEQ 709
Query: 121 VKSVSW--NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178
V + N+ LLAT D + +W++ N+ EC + + GH V ++ P +L
Sbjct: 710 VNCCHFTNNSHYLLLATASSDCFLKLWDL---NQKECRNTMFGHTNSVNHCRFSPDDKLL 766
Query: 179 FSCSYDNTIKVW---WAEDTDSDNWHCVQTISESNNGHSSTIW-ALSFNAKGDKLVSCSD 234
SCS D T+K+W A + S N SE I S++A G +++ +
Sbjct: 767 ASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAK 826
Query: 235 DLTIKIWGAD-ITRMQSGDGYASWRHLCTI 263
+ I +W D ++ G+ SW H C +
Sbjct: 827 N-KIFLWNMDSCLKVADCRGHLSWVH-CVM 854
Score = 198 (74.8 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 60/205 (29%), Positives = 98/205 (47%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK--LLATASFDATTCI 100
A+CS DK V+IW +S V +E H+ V C ++ + LLATAS D +
Sbjct: 681 ATCSVDKKVKIW----NSMTGGLVHVYDE-HSEQVNCCHFTNNSHYLLLATASSDCFLKL 735
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W D+ EC T+ GH N V ++ LLA+C D ++ +W+V NE + ++V Q
Sbjct: 736 W-DLN-QKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQ 793
Query: 161 GHAQDVKMVQWHPTMDVLFSC---SYDNTIKVWWAEDTDSDNWHCVQTISESN-NGHSST 216
+ + M+V+ C S D T ++ A W+ + ++ GH S
Sbjct: 794 FFLNSEEPQE---DMEVIVKCCSWSADGT-RIMVAAKNKIFLWNMDSCLKVADCRGHLSW 849
Query: 217 IWALSFNAKGDKLVSCSDDLTIKIW 241
+ + F+ G ++ SDD TI++W
Sbjct: 850 VHCVMFSPDGSSFLTSSDDQTIRLW 874
Score = 114 (45.2 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 39/140 (27%), Positives = 68/140 (48%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE-QSASSR--------FWNCK 66
T+ GHT+ V + P D + ASCS D T+++W+ +SA+ R F N +
Sbjct: 746 TMFGHTNSVNHCRFSPD---D---KLLASCSADGTLKLWDVKSANERKSINVKQFFLNSE 799
Query: 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
E+M V+ C+WS G + A+ + +W ++ + VA GH + V V +
Sbjct: 800 EPQEDMEV-IVKCCSWSADGTRIMVAAKNKIF-LW-NMDSCLK-VADCRGHLSWVHCVMF 855
Query: 127 NASGTLLATCGRDKSVWIWE 146
+ G+ T D+++ +WE
Sbjct: 856 SPDGSSFLTSSDDQTIRLWE 875
Score = 82 (33.9 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+A G D +V I E++ F+ S + GH + V+ +Q+ L S S D++I+VW
Sbjct: 941 IAFGGEDGAVEILELLNNRIFQ--SRI-GHKKTVRHIQFTDDGKTLISSSDDSSIQVW-- 995
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK-IWGADITRMQ 249
NW + + H T+ K KL+S S D T+K IW R++
Sbjct: 996 ------NWQSEEYVFLQ--AHQETVKDFKL-LKNSKLLSWSFDGTVKKIWSIITGRIE 1044
Score = 63 (27.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKML--LKKEKAHDMDVNSVQWSPGERRLLA 335
++ +++ + D+ +F S D S+++L L + + H V +S + LLA
Sbjct: 1051 QDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSV-DSTLLA 1109
Query: 336 SASDDGMIKIWELAN 350
+ D+G I+IW ++N
Sbjct: 1110 TGDDNGEIRIWNVSN 1124
Score = 42 (19.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 29/104 (27%), Positives = 42/104 (40%)
Query: 263 ISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK--------- 313
IS D +I +W E + A ++V+ F K+ + S+ +KK
Sbjct: 984 ISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVKKIWSIITGRI 1043
Query: 314 EK---AHDMDVNSVQWSPGERRLLASASDDGMIKIW--ELANTL 352
EK H V S SP + +S S D KIW EL + L
Sbjct: 1044 EKDFVCHQDTVLSCDISPDATKF-SSTSADKTAKIWSFELLSPL 1086
Score = 41 (19.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 267 HDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325
H +T+ + ++ +G + S + D S+Q + ++ Y L +AH V +
Sbjct: 967 HKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEE------YVFL----QAHQETVKDFK 1016
Query: 326 WSPGERRLLASASDDGMIK-IWEL 348
+ L S S DG +K IW +
Sbjct: 1017 LLKNSK--LLSWSFDGTVKKIWSI 1038
Score = 37 (18.1 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 334 LASASDDGMIKIWELAN 350
+A +DG ++I EL N
Sbjct: 941 IAFGGEDGAVEILELLN 957
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 187 (70.9 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 61/228 (26%), Positives = 100/228 (43%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
TLEGH V SLA ++ + +S S DKT+ IW + + + H+
Sbjct: 10 TLEGHNGWVTSLA----TSMENPNMLLSS-SRDKTLIIWNLTRDETSYGYPKRSLKGHSH 64
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135
V C S G +AS+D T +WE G GH N+V SVS++A + +
Sbjct: 65 IVSDCVISSDGAYALSASWDKTLRLWELATGT--TTRRFVGHTNDVLSVSFSADNRQIVS 122
Query: 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTIKVWWAE 193
RD+S+ +W + ++ +GH++ V V++ P V+ S +D +KVW
Sbjct: 123 GSRDRSIKLWNTLGDCKYTITE--KGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVW--- 177
Query: 194 DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
+ S C + + GH+ I ++ + G S D T +W
Sbjct: 178 ELSS----C--KLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLW 219
Score = 147 (56.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/207 (27%), Positives = 90/207 (43%)
Query: 66 KAVLEEMHTRTVRSCAWSPSG-KLLATASFDATTCIW----EDVGGDYECVATLEGHENE 120
K LE H V S A S +L ++S D T IW ++ Y +L+GH +
Sbjct: 8 KGTLEG-HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYP-KRSLKGHSHI 65
Query: 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180
V ++ G + DK++ +WE+ G GH DV V + + S
Sbjct: 66 VSDCVISSDGAYALSASWDKTLRLWELATGTT---TRRFVGHTNDVLSVSFSADNRQIVS 122
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF--NAKGDKLVSCSDDLTI 238
S D +IK+W +T D C TI+E GHS + + F N + +VS D +
Sbjct: 123 GSRDRSIKLW---NTLGD---CKYTITEK--GHSEWVSCVRFSPNPQNPVIVSSGWDKLV 174
Query: 239 KIWGADITRMQSGD-GYASWRHLCTIS 264
K+W ++Q+ G+ + + TIS
Sbjct: 175 KVWELSSCKLQTDHIGHTGYINTVTIS 201
Score = 113 (44.8 bits), Expect = 0.00075, P = 0.00075
Identities = 49/193 (25%), Positives = 77/193 (39%)
Query: 4 LDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
L D Y + E +GH++ V + + P PV S DK V++WE S+
Sbjct: 135 LGDCKYTITE----KGHSEWVSCVRFSPNPQ----NPVIVSSGWDKLVKVWELSS----- 181
Query: 64 NCKAVLEEM-HTRTVRSCAWSPSGKLLATASFDATTCIWE--DVGGDYECVATLEGHENE 120
CK + + HT + + SP G L A+ D TT +W+ + Y A E H
Sbjct: 182 -CKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALV 240
Query: 121 VK-SVSWNASGTL--LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177
+ W + T + +K + E+ P EF V + + + W
Sbjct: 241 FSPNRYWLCAATASSIIIFDLEKKSKVDELKP--EFAAVGKKSREPECISLA-WSADGQT 297
Query: 178 LFSCSYDNTIKVW 190
LF+ DN I+ W
Sbjct: 298 LFAGYTDNIIRAW 310
Score = 54 (24.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 28/135 (20%), Positives = 55/135 (40%)
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271
GH+ I ++ + G S D T +W D+ +HL +++ +D I
Sbjct: 190 GHTGYINTVTISPDGSLCASGGKDGTTMLW--DLNES---------KHLYSLNA-NDE-I 236
Query: 272 FSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331
++ +S A S+ F K +D + +K+ + + S+ WS +
Sbjct: 237 HALVFSPNRYWLCAATASSIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQ 296
Query: 332 RLLASASDDGMIKIW 346
L A +D+ +I+ W
Sbjct: 297 TLFAGYTDN-IIRAW 310
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 214 (80.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 67/235 (28%), Positives = 111/235 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++T++ H +WSL+ P G F + DK+V+ W+ + + L
Sbjct: 489 LETVDAHDGALWSLSLSPDQR--G----FVTGGADKSVKFWDFELVKDENSTQKRLSVKQ 542
Query: 74 TRTVRS-----C-AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
TRT++ C ++SP+ KLLA + D T I+ + +L GH+ V + +
Sbjct: 543 TRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIF--YVDTLKFFLSLYGHKLPVICMDIS 600
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
G L+AT D++V IW G +F +C L H V +++ P + F+ D
Sbjct: 601 YDGALIATGSADRNVKIW----GLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRK 656
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
IK W D+D + VQT+ GH IW L+ + GD +VS S D ++++W
Sbjct: 657 IKQW-----DADKFEHVQTLE----GHHQEIWCLAISPSGDYVVSSSHDKSLRLW 702
Score = 154 (59.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 52/215 (24%), Positives = 95/215 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRF-WNCKA-----VLEEMHTRTVRSCAWSPSGKLLATASF 94
VF + G+K + + F W+ + +L+ + C SP G LA
Sbjct: 27 VFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCP-SPDGLHLAVGYE 85
Query: 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154
D + I+ + G+ T GH+ V S+ ++ G LA+ +D + +W+V+ NE
Sbjct: 86 DGSIRIFSLLSGEGN--VTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVI--NESG 141
Query: 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+GH + + ++L S D +K WW D D HC +T+ GH
Sbjct: 142 LYR-LKGHKDAITQALFLREKNLLVSSGKDTMVK-WW----DLDTQHCFKTVV----GHR 191
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
+ +W L ++ +L++ + D ++ W DI ++
Sbjct: 192 TEVWGLVLVSEEKRLITGASDSELRAW--DIAYLE 224
Score = 44 (20.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 293 FFVESKDDLI---DGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASASDDGMIKIWE 347
FF KD I D ++ + E H ++ + SP G+ + S+S D +++WE
Sbjct: 648 FFTAGKDRKIKQWDADKFEHVQTLE-GHHQEIWCLAISPSGD--YVVSSSHDKSLRLWE 703
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 209 (78.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 82/293 (27%), Positives = 128/293 (43%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
+R I TL H D V A+ A + A+CS DKT+R++ + S F
Sbjct: 2 VRLIHTLADHGDDVSCCAFS--------AALLATCSLDKTIRLY---SLSDFAELPYSPL 50
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
+ HT V C +SPSG +LA+ S D TT +W G V G + V+ ++
Sbjct: 51 KFHTYAVHCCCFSPSGHVLASCSTDGTTVLWSSHSGHTLTVLEQPGG-SPVRVCCFSPDS 109
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ--WHPTMDVLFSCSYDNTIK 188
LA+ D S+ +W + C SV +D +V + P + + S +
Sbjct: 110 AYLASGAADGSIALWNAQTYKLYRCGSV-----KDSSLVACAFSPDGGLFVTGSSGGDLT 164
Query: 189 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK----GD-----KLVSCSDDLTIK 239
VW D C+ S H I SF+++ G+ +L SC D IK
Sbjct: 165 VW------DDRMRCLH----SEKAHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIK 214
Query: 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSV 291
+W ITR+ G+ ++ T+SG H + + +S +G ++ASG+ D SV
Sbjct: 215 LWAVTITRVL---GF-ELKYKSTLSG-HCAPVLACAFSHDGKMLASGSVDKSV 262
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 67/300 (22%), Positives = 124/300 (41%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
AS + D ++ +W + + + + C +V + ++ +CA+SP G L T S +W+
Sbjct: 113 ASGAADGSIALWN-AQTYKLYRCGSVKDS----SLVACAFSPDGGLFVTGSSGGDLTVWD 167
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA---SGT------LLATCGRDKSVWIWEV----MP 149
D C+ + + H+ + S+++ SG LA+CG+D + +W V +
Sbjct: 168 D---RMRCLHSEKAHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTITRVL 224
Query: 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV--QTIS 207
G E + S L GH V + +L S S D ++ + H + Q++
Sbjct: 225 GFELKYKSTLSGHCAPVLACAFSHDGKMLASGSVDKSVII-----------HGIGPQSVL 273
Query: 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH 267
+ H+ + +F L + S D T+ IW D+ G +H
Sbjct: 274 HTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQFDLETPCQGSMNDPLKH-------- 325
Query: 268 DRTIFSVHWSREGI---IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
F+ WS E + + + +D V F + + IDG L K+ A D+ + S+
Sbjct: 326 ----FTEEWSEEDVSVWLRAQGLEDLVGIF---RANNIDGKELLHLTKESLAGDLKIESL 378
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 49/211 (23%), Positives = 83/211 (39%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
V ASCS D T +W SS + VLE+ VR C +SP LA+ + D + +
Sbjct: 68 VLASCSTDGTTVLW----SSHSGHTLTVLEQPGGSPVRVCCFSPDSAYLASGAADGSIAL 123
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W Y+ ++ + + +++ G L T + +W+ + C+ +
Sbjct: 124 WN--AQTYKLYRCGSVKDSSLVACAFSPDGGLFVTGSSGGDLTVWD----DRMRCLHSEK 177
Query: 161 GHAQDVKMVQW--HPTMD-------VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNN 211
H + + P L SC D IK+W T + + +
Sbjct: 178 AHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTITRVLGFEL--KYKSTLS 235
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242
GH + + A +F+ G L S S D ++ I G
Sbjct: 236 GHCAPVLACAFSHDGKMLASGSVDKSVIIHG 266
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 26 SLAWKPTAGVDGVAPV-FASCSGDKTVRIWEQSASSRFW---NCKAVLEEMHTRTVRSCA 81
S + +P +G +G+ ASC D +++W + + K+ L H V +CA
Sbjct: 187 SFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTITRVLGFELKYKSTLSG-HCAPVLACA 245
Query: 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141
+S GK+LA+ S D + I +G + TL H V + ++ + LLAT DK+
Sbjct: 246 FSHDGKMLASGSVDKSVII-HGIGPQ-SVLHTLTQHTRYVTTCAFAPNTLLLATGSMDKT 303
Query: 142 VWIWE 146
V IW+
Sbjct: 304 VNIWQ 308
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 53/204 (25%), Positives = 89/204 (43%)
Query: 157 SVLQGHAQDVKMVQWHPTMDV-LFSCSY--DNTIKVWWAEDTDSDNWHCVQTISESNNGH 213
S+ +AQ K+ + D L +C++ D + V + D W S H
Sbjct: 120 SIALWNAQTYKLYRCGSVKDSSLVACAFSPDGGLFVTGSSGGDLTVWDDRMRCLHSEKAH 179
Query: 214 SSTIWALSFNAK----GD-----KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS 264
I SF+++ G+ +L SC D IK+W ITR+ G+ ++ T+S
Sbjct: 180 DLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTITRVL---GF-ELKYKSTLS 235
Query: 265 GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323
G H + + +S +G ++ASG+ D SV +I G + +L H V +
Sbjct: 236 G-HCAPVLACAFSHDGKMLASGSVDKSV---------IIHGIGPQSVLHTLTQHTRYVTT 285
Query: 324 VQWSPGERRLLASASDDGMIKIWE 347
++P LLA+ S D + IW+
Sbjct: 286 CAFAPNTL-LLATGSMDKTVNIWQ 308
>CGD|CAL0004667 [details] [associations]
symbol:SEC13 species:5476 "Candida albicans" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0051028 EMBL:AACQ01000027
EMBL:AACQ01000026 KO:K14004 RefSeq:XP_720011.1 RefSeq:XP_720143.1
ProteinModelPortal:Q5AEF2 SMR:Q5AEF2 STRING:Q5AEF2 GeneID:3638207
GeneID:3638425 KEGG:cal:CaO19.316 KEGG:cal:CaO19.7948
Uniprot:Q5AEF2
Length = 298
Score = 201 (75.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 81/280 (28%), Positives = 119/280 (42%)
Query: 86 GKLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSV 142
GK LAT S D T I++ G D Y+ + TL GHE V VSW G++LA+C D
Sbjct: 21 GKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWAHPKFGSILASCSYDGKA 80
Query: 143 WIWEVMPGNE-FECVSVLQGHAQDVKMVQW--HPTMDVLFSCSYDNTIKVWWAEDTDSDN 199
IW+ P + + ++ H V V W H VL S D + V D D
Sbjct: 81 LIWKEQPETQQWSIIAEHTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFND-DGTT 139
Query: 200 WHCVQTISESNNGHSSTIWA-LSFNAKGD-------KLVSCSDDLTIKIWGADITRMQSG 251
H + G +S WA +S ++K ++VSC D KIW D +
Sbjct: 140 SHVI--FDAHAIGANSATWAPVSTSSKDSAALKQQRRIVSCGSDNLAKIWKYDA----AN 193
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREGII----ASGAADDSVQFFVESKDDLIDGPSY 307
+ Y L G+ D + V WS +I A+ + D +V + + +D G
Sbjct: 194 NTYVEEAKL---EGHTD-WVRDVAWSPSNLIRSYIATASQDRTVLIWTQDRD----GKWQ 245
Query: 308 KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
K LL +EK D+ WS +LA + D + +W+
Sbjct: 246 KQLLTEEKFPDVCWRC-SWSLSGN-ILAVSGGDNKVSLWK 283
Score = 195 (73.7 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 68/259 (26%), Positives = 107/259 (41%)
Query: 6 DG--NYELREIQTLEGHTDRVWSLAWK-PTAGVDGVAPVFASCSGDKTVRIWEQSASSRF 62
DG NY+L I TL GH VW ++W P G + ASCS D IW++ ++
Sbjct: 39 DGTDNYKL--ITTLTGHEGPVWQVSWAHPKFG-----SILASCSYDGKALIWKEQPETQQ 91
Query: 63 WNCKAVLEEMHTRTVRSCAWSPS--GKLLATASFDATTCI--WEDVGGDYECVATLEGHE 118
W+ A +H +V S +W+P G +L S D + + D G + + H
Sbjct: 92 WSIIAE-HTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSHVI--FDAHA 148
Query: 119 NEVKSVSW-------NASGTL-----LATCGRDKSVWIWEV-MPGNEFECVSVLQGHAQD 165
S +W S L + +CG D IW+ N + + L+GH
Sbjct: 149 IGANSATWAPVSTSSKDSAALKQQRRIVSCGSDNLAKIWKYDAANNTYVEEAKLEGHTDW 208
Query: 166 VKMVQWHPT---MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF 222
V+ V W P+ + + S D T+ +W +D D W Q ++E W S+
Sbjct: 209 VRDVAWSPSNLIRSYIATASQDRTVLIW-TQDRDG-KWQ-KQLLTEEK--FPDVCWRCSW 263
Query: 223 NAKGDKLVSCSDDLTIKIW 241
+ G+ L D + +W
Sbjct: 264 SLSGNILAVSGGDNKVSLW 282
Score = 164 (62.8 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 51/157 (32%), Positives = 73/157 (46%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKP--TAGVDGVAPV----FASCSGDKTVRIW 54
++F DDG + + H S W P T+ D A SC D +IW
Sbjct: 131 VDFNDDGTTS--HV-IFDAHAIGANSATWAPVSTSSKDSAALKQQRRIVSCGSDNLAKIW 187
Query: 55 EQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL---LATASFDATTCIW-EDVGGDYEC 110
+ A++ + +A LE HT VR AWSPS + +ATAS D T IW +D G ++
Sbjct: 188 KYDAANNTYVEEAKLEG-HTDWVRDVAWSPSNLIRSYIATASQDRTVLIWTQDRDGKWQK 246
Query: 111 -VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146
+ T E + SW+ SG +LA G D V +W+
Sbjct: 247 QLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWK 283
Score = 160 (61.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 60/237 (25%), Positives = 101/237 (42%)
Query: 117 HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW-HPTM 175
H++ + + G LATC DK++ I+++ + ++ ++ L GH V V W HP
Sbjct: 8 HDDLIHDAVLDYYGKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWAHPKF 67
Query: 176 -DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+L SCSYD +W E ++ W + + +S WA + G L+ S
Sbjct: 68 GSILASCSYDGKALIW-KEQPETQQWSIIAEHTVHQASVNSVSWAP--HELGAVLLCTSS 124
Query: 235 DLTIKI--WGADITRMQS-GDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSV 291
D + + + D T D +A + T + + S ++ I S +D+
Sbjct: 125 DGKVSVVDFNDDGTTSHVIFDAHAIGANSATWAPVSTSSKDSAALKQQRRIVSCGSDNLA 184
Query: 292 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE--RRLLASASDDGMIKIW 346
+ + K D + +Y K E H V V WSP R +A+AS D + IW
Sbjct: 185 KIW---KYDAANN-TYVEEAKLE-GHTDWVRDVAWSPSNLIRSYIATASQDRTVLIW 236
Score = 149 (57.5 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 70/281 (24%), Positives = 113/281 (40%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEM-HTRTVRSCAWS-PS-GKLLATASFDATTC 99
A+CS DKT++I++ + N K + H V +W+ P G +LA+ S+D
Sbjct: 25 ATCSSDKTIKIFDLDGTD---NYKLITTLTGHEGPVWQVSWAHPKFGSILASCSYDGKAL 81
Query: 100 IWEDVGG--DYECVATLEGHENEVKSVSW--NASGTLLATCGRDKSVWIWEVMPGNEFEC 155
IW++ + +A H+ V SVSW + G +L D V + +
Sbjct: 82 IWKEQPETQQWSIIAEHTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSH 141
Query: 156 VSVLQGHAQDVKMVQWHP----TMDV--------LFSCSYDNTIKVWWAEDTDSDNWHCV 203
V + HA W P + D + SC DN K+W D ++ +
Sbjct: 142 V-IFDAHAIGANSATWAPVSTSSKDSAALKQQRRIVSCGSDNLAKIW-KYDAANNTY--- 196
Query: 204 QTISESN-NGHSSTI----WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASW- 257
+ E+ GH+ + W+ S N + + S D T+ IW Q DG W
Sbjct: 197 --VEEAKLEGHTDWVRDVAWSPS-NLIRSYIATASQDRTVLIW------TQDRDG--KWQ 245
Query: 258 RHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES 297
+ L T + D + WS G I+A D+ V + E+
Sbjct: 246 KQLLTEEKFPD-VCWRCSWSLSGNILAVSGGDNKVSLWKEN 285
Score = 148 (57.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN 64
D N E LEGHTD V +AW P+ + + A+ S D+TV IW Q + W
Sbjct: 190 DAANNTYVEEAKLEGHTDWVRDVAWSPS---NLIRSYIATASQDRTVLIWTQDRDGK-WQ 245
Query: 65 CKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLE 115
+ + EE C+WS SG +LA + D +W E++ G +E ++
Sbjct: 246 KQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEVD 297
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 37/139 (26%), Positives = 63/139 (45%)
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT 270
N H I + G +L +CS D TIKI+ D+ DG +++ + T++G H+
Sbjct: 6 NAHDDLIHDAVLDYYGKRLATCSSDKTIKIF--DL------DGTDNYKLITTLTG-HEGP 56
Query: 271 IFSVHWSRE---GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327
++ V W+ I+AS + D + E + ++ + H VNSV W+
Sbjct: 57 VWQVSWAHPKFGSILASCSYDGKALIWKEQPET-----QQWSIIAEHTVHQASVNSVSWA 111
Query: 328 PGER-RLLASASDDGMIKI 345
P E +L S DG + +
Sbjct: 112 PHELGAVLLCTSSDGKVSV 130
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 195 (73.7 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 83/309 (26%), Positives = 138/309 (44%)
Query: 65 CKAVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYEC-VATLEGHENEVK 122
C A + H T+ S +SPS L T S D T +W+ D + +AT++GH N V
Sbjct: 126 CTASMNG-HDGTIISAQFSPSTSSRLVTGSGDFTARLWDC---DTQTPIATMKGHTNWVS 181
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP---TMD--- 176
V+W +++AT D ++ W+ G+ L+ H + + + W P D
Sbjct: 182 CVAWAPDASIIATGSMDNTIRFWDPKKGSPIG--DALRRHTKPIMALCWQPLHLAPDSGP 239
Query: 177 -VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235
+L S S DNT+++W + ++T+ + +GH++ I + + + + + S S D
Sbjct: 240 YLLASGSKDNTVRIWNVK---------LRTLLFTLSGHTAPITCVRWGGQ-NWIYSSSYD 289
Query: 236 LTIKIWGA-DITRMQSGDGYASW-RHLCTI------SGYHDRTIFSVH-WSREGIIAS-- 284
TI+IW A D + G+A+ HL SG +D T F +S E A
Sbjct: 290 KTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKER 349
Query: 285 --GAADDSVQFFVESKDDLI----DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 338
S + V + DDL D + K H VN +SP + R +A+AS
Sbjct: 350 YEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSP-DGRCIATAS 408
Query: 339 DDGMIKIWE 347
D +++W+
Sbjct: 409 FDSSVRLWD 417
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 86/358 (24%), Positives = 146/358 (40%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
++ GH + S + P+ + + SGD T R+W+ + K HT
Sbjct: 129 SMNGHDGTIISAQFSPST-----SSRLVTGSGDFTARLWDCDTQTPIATMKG-----HTN 178
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA------S 129
V AW+P ++AT S D T W+ G L H + ++ W S
Sbjct: 179 WVSCVAWAPDASIIATGSMDNTIRFWDPKKGS-PIGDALRRHTKPIMALCWQPLHLAPDS 237
Query: 130 GT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188
G LLA+ +D +V IW V + L GH + V+W + ++S SYD TI+
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRT---LLFTLSGHTAPITCVRWGG-QNWIYSSSYDKTIR 293
Query: 189 VWWAEDTDSDN---WHCVQ----TISESNNGHSSTIWALSFNAKG---------DKLVSC 232
+W A+D + H + ++S + S F K ++ +C
Sbjct: 294 IWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKERYEAC 353
Query: 233 SDDLTIKIWGA-DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDS 290
++ A D ++ D S + + + G H + + +S +G IA+ + D S
Sbjct: 354 LKQSGERLVSASDDLQLILWDPQKSTKPITKMHG-HQKVVNHASFSPDGRCIATASFDSS 412
Query: 291 VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
V+ + DG + K L + H V WS + RLL S+S D +K+W++
Sbjct: 413 VRLW--------DGKTGKFLATL-RGHVAAVYQCAWST-DSRLLVSSSQDTTLKVWDV 460
Score = 176 (67.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
S S D + +W+ S++ H + V ++SP G+ +ATASFD++ +W+
Sbjct: 363 SASDDLQLILWDPQKSTK----PITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN-EFECVSVLQGH 162
G + +ATL GH V +W+ LL + +D ++ +W+V +F+ L GH
Sbjct: 419 KTGKF--LATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFD----LPGH 472
Query: 163 AQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
V V W P + S D +++W
Sbjct: 473 EDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 175 (66.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 56/180 (31%), Positives = 85/180 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I T++GHT+ V +AW P A + A+ S D T+R W+ S + H
Sbjct: 170 IATMKGHTNWVSCVAWAPDASI------IATGSMDNTIRFWDPKKGSPIGDAL----RRH 219
Query: 74 TRTVRSCAWSP------SGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW 126
T+ + + W P SG LLA+ S D T IW +V + TL GH + V W
Sbjct: 220 TKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIW-NVKLR-TLLFTLSGHTAPITCVRW 277
Query: 127 NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
+ ++ DK++ IW+ G +C+ +L+GHA V + T VL S +YD+T
Sbjct: 278 GGQNWIYSS-SYDKTIRIWDAKDG---KCLHILKGHAARVNHLSLS-TEHVLRSGAYDHT 332
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/140 (32%), Positives = 68/140 (48%)
Query: 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC 65
D + I + GH V ++ P DG A+ S D +VR+W+ + +F
Sbjct: 374 DPQKSTKPITKMHGHQKVVNHASFSP----DGRC--IATASFDSSVRLWD-GKTGKFL-- 424
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
A L H V CAWS +LL ++S D T +W DV + L GHE++V +V
Sbjct: 425 -ATLRG-HVAAVYQCAWSTDSRLLVSSSQDTTLKVW-DVRSK-KMKFDLPGHEDQVFAVD 480
Query: 126 WNASGTLLATCGRDKSVWIW 145
W+ G +A+ G DK+V IW
Sbjct: 481 WSPDGQRVASGGADKAVRIW 500
Score = 134 (52.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 39/167 (23%), Positives = 79/167 (47%)
Query: 129 SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188
SG L + D + +W+ P + ++ + GH + V + P + + S+D++++
Sbjct: 357 SGERLVSASDDLQLILWD--PQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVR 414
Query: 189 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248
+W D + T+ GH + ++ +++ LVS S D T+K+W +M
Sbjct: 415 LW-----DGKTGKFLATL----RGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKM 465
Query: 249 QSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFF 294
+ + G+ D+ +F+V WS +G +ASG AD +V+ +
Sbjct: 466 KFD-----------LPGHEDQ-VFAVDWSPDGQRVASGGADKAVRIW 500
Score = 78 (32.5 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF-VESKDDLIDGPSYKM 309
DG + L T+ G H ++ WS + ++ S + D +++ + V SK D P
Sbjct: 417 DGKTG-KFLATLRG-HVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPG--- 471
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
H+ V +V WSP +R+ AS D ++IW
Sbjct: 472 -------HEDQVFAVDWSPDGQRV-ASGGADKAVRIW 500
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 207 (77.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 65/255 (25%), Positives = 115/255 (45%)
Query: 114 LEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGN----EFECVSVLQGHAQDVKM 168
L+GH E +SWN + L+ + D++V W++ E + V +GH V+
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 169 VQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 227
V WH D +F S D + +W + S HC+ + HS+ + L+FN +
Sbjct: 228 VAWHVLHDGVFGSVGDDKKLLIW--DVRTSTPGHCI-------DAHSAEVNCLAFNPYSE 278
Query: 228 KLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS--REGIIAS 284
+++ S D T+ +W RM+ L + + D IF V WS E I+AS
Sbjct: 279 FILATGSADKTVALWDLRNLRMK----------LHSFESHRDE-IFQVQWSPHNETILAS 327
Query: 285 GAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA 337
D + + SK +D DGP + + H ++ W+P E ++ S
Sbjct: 328 SGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFI--HGGHTAKISDFSWNPNEPWVVCSV 385
Query: 338 SDDGMIKIWELANTL 352
S+D ++++W++A+ +
Sbjct: 386 SEDNILQVWQMADNI 400
Score = 168 (64.2 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 56/199 (28%), Positives = 89/199 (44%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
EL+ +GH V +AW DGV F S DK + IW+ S+ +C
Sbjct: 211 ELQAKDVFKGHESVVEDVAWHVLH--DGV---FGSVGDDKKLLIWDVRTSTP-GHCI--- 261
Query: 70 EEMHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
+ H+ V A++P + +LAT S D T +W D+ + + E H +E+ V W+
Sbjct: 262 -DAHSAEVNCLAFNPYSEFILATGSADKTVALW-DLRNLRMKLHSFESHRDEIFQVQWSP 319
Query: 129 SG-TLLATCGRDKSVWIWEVMPGNEF-----------ECVSVLQGHAQDVKMVQWHPTMD 176
T+LA+ G DK + +W++ E E + + GH + W+P
Sbjct: 320 HNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 379
Query: 177 -VLFSCSYDNTIKVWWAED 194
V+ S S DN ++VW D
Sbjct: 380 WVVCSVSEDNILQVWQMAD 398
Score = 168 (64.2 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 54/231 (23%), Positives = 104/231 (45%)
Query: 73 HTRTVRSCAWSPSGK-LLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVSW 126
HT+ +W+P+ + L+ +AS D T C W+ +V G+ + +GHE+ V+ V+W
Sbjct: 171 HTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAW 230
Query: 127 NA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
+ + + G DK + IW+V C+ H+ +V + ++P + +L + S D
Sbjct: 231 HVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDA---HSAEVNCLAFNPYSEFILATGSAD 287
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG- 242
T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 288 KTVALW-----DLRN---LRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
Query: 243 ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 340 SKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNI 390
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 60/238 (25%), Positives = 103/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF---WNCKAVLEEMH 73
L+GHT + L+W P +G+ S S D+TV W+ +A+ K V + H
Sbjct: 168 LKGHTKEGYGLSWNPNK--EGL---ILSASDDQTVCHWDINANQNVAGELQAKDVFKG-H 221
Query: 74 TRTVRSCAWSP-SGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNA-SG 130
V AW + + D IW+ C+ + H EV +++N S
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCI---DAHSAEVNCLAFNPYSE 278
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ VQW P + +L S D + V
Sbjct: 279 FILATGSADKTVALWDLR--NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHV 336
Query: 190 W----WAEDTDSDNWHC-VQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W ED +++ + + GH++ I S+N +V S S+D +++W
Sbjct: 337 WDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVW 394
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 207 (77.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 65/255 (25%), Positives = 115/255 (45%)
Query: 114 LEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGN----EFECVSVLQGHAQDVKM 168
L+GH E +SWN + L+ + D++V W++ E + V +GH V+
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 169 VQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 227
V WH D +F S D + +W + S HC+ + HS+ + L+FN +
Sbjct: 228 VAWHVLHDGVFGSVGDDKKLLIW--DVRTSTPGHCI-------DAHSAEVNCLAFNPYSE 278
Query: 228 KLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS--REGIIAS 284
+++ S D T+ +W RM+ L + + D IF V WS E I+AS
Sbjct: 279 FILATGSADKTVALWDLRNLRMK----------LHSFESHRDE-IFQVQWSPHNETILAS 327
Query: 285 GAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA 337
D + + SK +D DGP + + H ++ W+P E ++ S
Sbjct: 328 SGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFI--HGGHTAKISDFSWNPNEPWVVCSV 385
Query: 338 SDDGMIKIWELANTL 352
S+D ++++W++A+ +
Sbjct: 386 SEDNILQVWQMADNI 400
Score = 168 (64.2 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 56/199 (28%), Positives = 89/199 (44%)
Query: 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
EL+ +GH V +AW DGV F S DK + IW+ S+ +C
Sbjct: 211 ELQAKDVFKGHESVVEDVAWHVLH--DGV---FGSVGDDKKLLIWDVRTSTP-GHCI--- 261
Query: 70 EEMHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
+ H+ V A++P + +LAT S D T +W D+ + + E H +E+ V W+
Sbjct: 262 -DAHSAEVNCLAFNPYSEFILATGSADKTVALW-DLRNLRMKLHSFESHRDEIFQVQWSP 319
Query: 129 SG-TLLATCGRDKSVWIWEVMPGNEF-----------ECVSVLQGHAQDVKMVQWHPTMD 176
T+LA+ G DK + +W++ E E + + GH + W+P
Sbjct: 320 HNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 379
Query: 177 -VLFSCSYDNTIKVWWAED 194
V+ S S DN ++VW D
Sbjct: 380 WVVCSVSEDNILQVWQMAD 398
Score = 168 (64.2 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 54/231 (23%), Positives = 104/231 (45%)
Query: 73 HTRTVRSCAWSPSGK-LLATASFDATTCIWE-----DVGGDYECVATLEGHENEVKSVSW 126
HT+ +W+P+ + L+ +AS D T C W+ +V G+ + +GHE+ V+ V+W
Sbjct: 171 HTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAW 230
Query: 127 NA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
+ + + G DK + IW+V C+ H+ +V + ++P + +L + S D
Sbjct: 231 HVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDA---HSAEVNCLAFNPYSEFILATGSAD 287
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWG- 242
T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 288 KTVALW-----DLRN---LRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
Query: 243 ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E + ++D++
Sbjct: 340 SKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNI 390
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 60/238 (25%), Positives = 103/238 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF---WNCKAVLEEMH 73
L+GHT + L+W P +G+ S S D+TV W+ +A+ K V + H
Sbjct: 168 LKGHTKEGYGLSWNPNK--EGL---ILSASDDQTVCHWDINANQNVAGELQAKDVFKG-H 221
Query: 74 TRTVRSCAWSP-SGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSVSWNA-SG 130
V AW + + D IW+ C+ + H EV +++N S
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCI---DAHSAEVNCLAFNPYSE 278
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ N + + H ++ VQW P + +L S D + V
Sbjct: 279 FILATGSADKTVALWDLR--NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHV 336
Query: 190 W----WAEDTDSDNWHC-VQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W ED +++ + + GH++ I S+N +V S S+D +++W
Sbjct: 337 WDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVW 394
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 212 (79.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 68/241 (28%), Positives = 115/241 (47%)
Query: 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
Q L GHTD V +L V +FASC+ D++VRIW + + + C A HT
Sbjct: 370 QILHGHTDIVLAL------DVFRKGWLFASCAKDQSVRIWRMNKAGQVM-CVAQ-GSGHT 421
Query: 75 RTVRS-CAWSPSGKLLATASFDATTCIW--------EDVGGD-----YECVATLEGHENE 120
+V + C L T S D T +W ++ D + T H+ +
Sbjct: 422 HSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKD 481
Query: 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180
+ SV+ + LLAT +D++ +W +P + + + V GH + + VQ+ P VL +
Sbjct: 482 INSVAIAPNDKLLATGSQDRTAKLW-ALP--QCQLLGVFSGHRRGLWCVQFSPMDQVLAT 538
Query: 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240
S D TIK+W +D + C++T GH +++ ++F ++G +L+S D +K+
Sbjct: 539 ASADGTIKLWALQD-----FSCLKTFE----GHDASVLKVAFVSRGTQLLSSGSDGLVKL 589
Query: 241 W 241
W
Sbjct: 590 W 590
Score = 173 (66.0 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 46/186 (24%), Positives = 82/186 (44%)
Query: 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
+ H + + S A +P+ KLLAT S D T +W + + GH + V ++
Sbjct: 475 QRCHDKDINSVAIAPNDKLLATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWCVQFSPM 532
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
+LAT D ++ +W + +F C+ +GH V V + L S D +K+
Sbjct: 533 DQVLATASADGTIKLWALQ---DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKL 589
Query: 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
W T +N CV+T+ + H +W L + D ++ + D + +W D+T +
Sbjct: 590 W----TIKNN-ECVRTL----DAHEDKVWGLHCSRLDDHALTGASDSRVILW-KDVTEAE 639
Query: 250 SGDGYA 255
+ A
Sbjct: 640 QAEEQA 645
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 65/246 (26%), Positives = 112/246 (45%)
Query: 114 LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
L GH + V ++ G L A+C +D+SV IW + + CV+ GH V V
Sbjct: 372 LHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSR 431
Query: 174 TMD-VLFSCSYDNTIKVW------WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
+ L + S D T+K+W +++T DN + + H I +++ A
Sbjct: 432 LKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAI-APN 490
Query: 227 DKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REGIIAS 284
DKL++ S D T K+W ++ L SG H R ++ V +S + ++A+
Sbjct: 491 DKLLATGSQDRTAKLWALPQCQL-----------LGVFSG-HRRGLWCVQFSPMDQVLAT 538
Query: 285 GAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 344
+AD +++ + + D LK + HD V V + +LL+S SD G++K
Sbjct: 539 ASADGTIKLW--ALQDF-------SCLKTFEGHDASVLKVAFVSRGTQLLSSGSD-GLVK 588
Query: 345 IWELAN 350
+W + N
Sbjct: 589 LWTIKN 594
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 44/160 (27%), Positives = 75/160 (46%)
Query: 43 ASCSGDKTVRIWEQSASSRFW---NCKAV-LEEMHTRTVRSCAWSPSGKLLATASFDATT 98
A DK + Q +++ W C+ + + H R + +SP ++LATAS D T
Sbjct: 486 AIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTI 545
Query: 99 CIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSV 158
+W D+ C+ T EGH+ V V++ + GT L + G D V +W + NE CV
Sbjct: 546 KLW--ALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIK-NNE--CVRT 600
Query: 159 LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198
L H V + D + + D+ + + W + T+++
Sbjct: 601 LDAHEDKVWGLHCSRLDDHALTGASDSRV-ILWKDVTEAE 639
Score = 111 (44.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 58/251 (23%), Positives = 105/251 (41%)
Query: 18 EGHTDRVW-SLAWKPTAGV--DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT 74
EG R+W ++ P A + D + + A+ D VR+W+ + + +H
Sbjct: 97 EGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHL 156
Query: 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA 134
P+ LL +++ DA +W D C+A L H + V S++++A G +
Sbjct: 157 VAFHP---DPTRLLLFSSATDAAIRVWSLQ--DRSCLAVLTAHYSAVTSLAFSADGHTML 211
Query: 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV-------LFSCSYDN-T 186
+ GRDK IW++ V V + V + + P + F + D T
Sbjct: 212 SSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPE-EPVSQLGVKSPGLYFLTAGDQGT 270
Query: 187 IKVWWAEDTDSDNWHCVQTISESNN-GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245
++VW ++ + CV T ++ G T L+ A G L + +D + ++ A
Sbjct: 271 LRVW-----EAASGQCVYTQAQPPGPGQELTHCTLAHTA-GVVLTATADH-NLLLYEARS 323
Query: 246 TRMQSG-DGYA 255
R+Q GY+
Sbjct: 324 LRLQKQFAGYS 334
Score = 65 (27.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 24/93 (25%), Positives = 40/93 (43%)
Query: 261 CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319
C I H + ++ R+G + AS A D SV+ + +K + M + + H
Sbjct: 369 CQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQV------MCVAQGSGHTH 422
Query: 320 DVNSVQWSPGERRLLASASDDGMIKIWELANTL 352
V +V S + L + S D +K+W L L
Sbjct: 423 SVGTVCCSRLKESFLVTGSQDCTVKLWPLPKAL 455
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 207 (77.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 72/277 (25%), Positives = 126/277 (45%)
Query: 94 FDATTCIWEDVGGDYECVATLE--GHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMP 149
FD T E D +C L+ GH+ E +SWN G LL+ C D+S+ +W++
Sbjct: 149 FDTTKHPLEPTP-DGKCSPNLKLTGHKKEGYGISWNPRKEGHLLS-CSDDQSICMWDISA 206
Query: 150 GNE----FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT 205
++ + +++ GH V+ V WH D F D+ + W T + H V+
Sbjct: 207 ASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEA 266
Query: 206 ISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTIS 264
H+S + LSFN + LV+ S D T+ +W D+ + G+ S IS
Sbjct: 267 -------HNSEVNCLSFNPFCEFLVATGSTDKTVALW--DMRNL--GNRLHS-----LIS 310
Query: 265 GYHDRTIFSVHWS--REGIIASGAADDSVQFF-------VESKDDLIDGPSYKMLLKKEK 315
H +F V +S E ++AS +D V + ++ +D DGP + +
Sbjct: 311 --HTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFI--HG 366
Query: 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIWELANTL 352
H ++ W+P + +AS ++D +++IW++A +
Sbjct: 367 GHTSKISDFSWNPNDPWSIASVAEDNILQIWQMAENI 403
Score = 183 (69.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 64/237 (27%), Positives = 103/237 (43%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE--EMHT 74
L GH + ++W P +G SCS D+++ +W+ SA+S+ + L HT
Sbjct: 170 LTGHKKEGYGISWNPRK--EGH---LLSCSDDQSICMWDISAASKSDSTLDALNIYNGHT 224
Query: 75 RTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTL 132
V AW + D IW+ G + + +E H +EV +S+N L
Sbjct: 225 SIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGT-KPIHVVEAHNSEVNCLSFNPFCEFL 283
Query: 133 LATCGRDKSVWIWEVMP-GNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVW 190
+AT DK+V +W++ GN L H +V VQ+ P + VL SC D + VW
Sbjct: 284 VATGSTDKTVALWDMRNLGNRLHS---LISHTDEVFQVQFSPHNETVLASCGSDRRVNVW 340
Query: 191 -----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIKIW 241
E + D + + GH+S I S+N + S ++D ++IW
Sbjct: 341 DLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIW 397
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/203 (25%), Positives = 88/203 (43%)
Query: 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE 70
L + GHT V +AW F S DK + IW+ ++ +
Sbjct: 214 LDALNIYNGHTSIVEDVAWHYIHDT-----FFGSVGDDKKLMIWDTRTGTK----PIHVV 264
Query: 71 EMHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS 129
E H V +++P + L+AT S D T +W D+ + +L H +EV V ++
Sbjct: 265 EAHNSEVNCLSFNPFCEFLVATGSTDKTVALW-DMRNLGNRLHSLISHTDEVFQVQFSPH 323
Query: 130 G-TLLATCGRDKSVWIWEVM-----PGNEF------ECVSVLQGHAQDVKMVQWHPTMD- 176
T+LA+CG D+ V +W++ NE E + + GH + W+P
Sbjct: 324 NETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPW 383
Query: 177 VLFSCSYDNTIKVW-WAEDTDSD 198
+ S + DN +++W AE+ +D
Sbjct: 384 SIASVAEDNILQIWQMAENIYND 406
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 208 (78.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 82/291 (28%), Positives = 128/291 (43%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
I TL H D V A+ T + A+CS DKT+R++ S + + + H
Sbjct: 5 IHTLADHGDDVSCCAFSST--------LLATCSLDKTIRLYSLSDFAELPHSPL---KFH 53
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
T V C++SPSG +LA+ S D TT +W G V G + V+ ++ T L
Sbjct: 54 TYAVHCCSFSPSGHVLASCSTDGTTVLWSAHSGHTLTVLEQPGG-SPVRVCCFSPDSTYL 112
Query: 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ--WHPTMDVLFSCSYDNTIKVWW 191
A+ D SV +W + C SV +D +V + P +L + S + VW
Sbjct: 113 ASGAADGSVVLWNAHSYKLYRCGSV-----KDSSLVACAFSPDGGLLVTGSSGGDLTVW- 166
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK----GD------KLVSCSDDLTIKIW 241
D C+ S H I SF+++ G+ +L SC D IK+W
Sbjct: 167 -----DDRMRCLH----SEKAHDLGITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLW 217
Query: 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSV 291
TR+ G+ ++ T+SG H + + +S +G ++ASG+ D SV
Sbjct: 218 VVSFTRVL---GF-ELKYRSTLSG-HCAPVLACAFSHDGQMLASGSVDKSV 263
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 69/294 (23%), Positives = 122/294 (41%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
AS + D +V +W + S + + C +V + ++ +CA+SP G LL T S +W+
Sbjct: 113 ASGAADGSVVLWN-AHSYKLYRCGSVKDS----SLVACAFSPDGGLLVTGSSGGDLTVWD 167
Query: 103 DVGGDYECVATLEGHENEVKSVSWNA---SGT-------LLATCGRDKSVWIWEVMPGNE 152
D C+ + + H+ + S+++ SG LA+CG+D + +W V
Sbjct: 168 D---RMRCLHSEKAHDLGITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLWVV----S 220
Query: 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHC-VQTISESNN 211
F V + + P + FS +D + + D + Q++ +
Sbjct: 221 FTRVLGFELKYRSTLSGHCAPVLACAFS--HDGQMLASGSVDKSVIIYDIGTQSVLHTLT 278
Query: 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRHLCTISGYHDRT 270
H+ + +F L + S D T+ IW D+ T Q+G +H I + +
Sbjct: 279 QHTRYVTTCAFAPNTLLLATGSMDKTVNIWQFDLETPCQAGSVSDQLKHF--IEDWSEED 336
Query: 271 IFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324
+ W R A G +D V F + + IDG L K+ A DM + S+
Sbjct: 337 VSK--WLR----AQGL-EDLVDIF---RTNNIDGKELLHLTKESLAGDMKIESL 380
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 66/283 (23%), Positives = 115/283 (40%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
V ASCS D T +W SA S + VLE+ VR C +SP LA+ + D + +
Sbjct: 68 VLASCSTDGTTVLW--SAHSG--HTLTVLEQPGGSPVRVCCFSPDSTYLASGAADGSVVL 123
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W Y+ ++ + + +++ G LL T + +W+ + C+ +
Sbjct: 124 WN--AHSYKLYRCGSVKDSSLVACAFSPDGGLLVTGSSGGDLTVWD----DRMRCLHSEK 177
Query: 161 GHAQDVKMVQW--HPT--------MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210
H + + P + L SC D IK+W T + + S
Sbjct: 178 AHDLGITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLWVVSFTRVLGFELKYRSTLS- 236
Query: 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIW--GADI--------TRMQSGDGYASWRHL 260
GH + + A +F+ G L S S D ++ I+ G TR + +A L
Sbjct: 237 -GHCAPVLACAFSHDGQMLASGSVDKSVIIYDIGTQSVLHTLTQHTRYVTTCAFAP-NTL 294
Query: 261 CTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE--SKDDL 301
+G D+T+ + E +G+ D ++ F+E S++D+
Sbjct: 295 LLATGSMDKTVNIWQFDLETPCQAGSVSDQLKHFIEDWSEEDV 337
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 202 (76.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 61/229 (26%), Positives = 101/229 (44%)
Query: 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
E + HT V S+ + DG + V AS DKT+++W ++
Sbjct: 96 ESTVFKAHTATVRSVHFSS----DGQSLVTAS--DDKTIKVWTVHRQKFLFSLS-----Q 144
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H VR +SP G+L+A+AS D T +W+ EC+ + H V ++ SGT
Sbjct: 145 HINWVRCARFSPDGRLIASASDDKTVKLWDKTSR--ECIHSFCEHGGFANHVEFHPSGTC 202
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+A G DK+V +W+V + V H V + +HP+ + L + S D+T+K+
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQHYQV---HTAAVNSLSFHPSGNYLITASNDSTLKI--- 256
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
D + T+ +GH ++F+ GD S D + +W
Sbjct: 257 --LDLLEGRLLYTL----HGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 181 (68.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 54/174 (31%), Positives = 80/174 (45%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRT 76
L GH D V + + P+ + AS S DKTV +W S KA HT T
Sbjct: 58 LVGHKDAVMCVQFSPSGHL------VASGSRDKTVCLWVPSVKGESTVFKA-----HTAT 106
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
VRS +S G+ L TAS D T +W + + +L H N V+ ++ G L+A+
Sbjct: 107 VRSVHFSSDGQSLVTASDDKTIKVWTVHRQKF--LFSLSQHINWVRCARFSPDGRLIASA 164
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
DK+V +W+ EC+ H V++HP+ + + D T+KVW
Sbjct: 165 SDDKTVKLWDK---TSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Score = 180 (68.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/177 (26%), Positives = 84/177 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLEGHENEVKSVSWNASGT 131
H V +SPSG L+A+ S D T C+W V G+ + H V+SV +++ G
Sbjct: 61 HKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGES---TVFKAHTATVRSVHFSSDGQ 117
Query: 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
L T DK++ +W V + + + L H V+ ++ P ++ S S D T+K+W
Sbjct: 118 SLVTASDDKTIKVWTV---HRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW- 173
Query: 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248
D + C+ + E + G ++ + F+ G + + D T+K+W + R+
Sbjct: 174 ----DKTSRECIHSFCE-HGGFANHV---EFHPSGTCIAAAGTDKTVKVWDVRMNRL 222
Score = 157 (60.3 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + S +S + K LA+ S D+ IW + L GH++ V V ++ SG L
Sbjct: 19 HRDAITSVDFSLNKKQLASGSMDSCLKIWS-MKPQMRAYC-LVGHKDAVMCVQFSPSGHL 76
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
+A+ RDK+V +W +P + E +V + H V+ V + L + S D TIKVW
Sbjct: 77 VASGSRDKTVCLW--VPSVKGES-TVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTV 133
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
Q S + H + + F+ G + S SDD T+K+W
Sbjct: 134 HR---------QKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW 173
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 37/126 (29%), Positives = 65/126 (51%)
Query: 116 GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175
GH + + SV ++ + LA+ D + IW + P C L GH V VQ+ P+
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYC---LVGHKDAVMCVQFSPSG 74
Query: 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235
++ S S D T+ +W ++ T+ ++ H++T+ ++ F++ G LV+ SDD
Sbjct: 75 HLVASGSRDKTVCLW-VPSVKGES-----TVFKA---HTATVRSVHFSSDGQSLVTASDD 125
Query: 236 LTIKIW 241
TIK+W
Sbjct: 126 KTIKVW 131
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
A+ DKTV++W+ + + ++HT V S ++ PSG L TAS D+T I +
Sbjct: 204 AAAGTDKTVKVWDVRMNRLLQHY-----QVHTAAVNSLSFHPSGNYLITASNDSTLKILD 258
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146
+ G + TL GH+ V+++ +G A+ G D+ V +W+
Sbjct: 259 LLEG--RLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
>POMBASE|SPBC215.15 [details] [associations]
symbol:sec13 "COPII-coated vesicle component Sec13"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006999
"nuclear pore organization" evidence=ISO] [GO:0030127 "COPII
vesicle coat" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0071937 "barrier septum assembly involved in cell
cycle cytokinesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC215.15 GO:GO:0005829
GO:GO:0005886 GO:GO:0006886 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0005789 EMBL:CU329671 eggNOG:COG2319 GO:GO:0005643
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0051028 GO:GO:0071937
GO:GO:0030127 GO:GO:0006999 HOGENOM:HOG000216895 KO:K14004
OMA:IKLWKEE OrthoDB:EOG4QNR53 PIR:T39905 RefSeq:NP_596692.1
ProteinModelPortal:O94319 STRING:O94319 PRIDE:O94319
EnsemblFungi:SPBC215.15.1 GeneID:2540716 KEGG:spo:SPBC215.15
NextBio:20801838 Uniprot:O94319
Length = 297
Score = 199 (75.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 75/279 (26%), Positives = 116/279 (41%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEM--HTRTVRSCAWS-PS-GKLLATASFDATT 98
A+CS D+T++++ S + N + +LE + H+ V W+ P G +LA+AS+D
Sbjct: 25 ATCSSDQTIKVF--SIEN---NQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHV 79
Query: 99 CIWEDVGGDYECVATLEGHENEVKSVSW--NASGTLLATCGRDKSVWIWEVMPGNEFECV 156
+W + GG + + H+ V +VSW + G LLA D V + E +
Sbjct: 80 IVWRETGGVWSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGSCD-T 138
Query: 157 SVLQGHAQDVKMVQWHPTM---DV-----------LFSCSYDNTIKVWWAEDTDSDNWHC 202
+ H V W P V L + DN +K+W A D +NW
Sbjct: 139 RIFTAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVKIW-AFDAGVNNWIL 197
Query: 203 VQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHL-C 261
T++ + WA S L S S D + IW + GDG W+
Sbjct: 198 EDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIW------TKEGDG--PWQKTPL 249
Query: 262 TISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKD 299
T + D + V WS G I+A D+ V F ES++
Sbjct: 250 TEEKFPD-IAWRVSWSLSGNILAVSCGDNKVYLFKESQN 287
Score = 182 (69.1 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 70/246 (28%), Positives = 102/246 (41%)
Query: 14 IQTLEGHTDRVWSLAWK-PTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM 72
++TL GH+ VW L W P G + AS S D V +W ++ W+ + +
Sbjct: 46 LETLRGHSGPVWQLGWAHPKFGT-----ILASASYDGHVIVWRETGG--VWS-ELMDHTA 97
Query: 73 HTRTVRSCAWSPS--GKLLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNA- 128
H +V + +W+P G LLA AS D + E D C + HE +V W+
Sbjct: 98 HQASVNAVSWAPHEYGALLACASSDGKVSVLE-FKDDGSCDTRIFTAHEPGCNAVCWSPP 156
Query: 129 --SGTL-----------LATCGRDKSVWIWEVMPG-NEFECVSVLQGHAQDVKMVQWHPT 174
SG++ LAT G D V IW G N + L GH + V W P+
Sbjct: 157 SLSGSVVGQSPAAGPKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPS 216
Query: 175 MDV----LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL- 229
+ + L S S D + +W E D W E W +S++ G+ L
Sbjct: 217 VGLTKTYLASASQDKNVFIWTKEG-DGP-WQKTPLTEEK---FPDIAWRVSWSLSGNILA 271
Query: 230 VSCSDD 235
VSC D+
Sbjct: 272 VSCGDN 277
Score = 161 (61.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 83/309 (26%), Positives = 122/309 (39%)
Query: 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA 128
++ H + GK LAT S D T ++ + TL GH V + W
Sbjct: 4 VDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAH 63
Query: 129 S--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSC-SYD 184
GT+LA+ D V +W G E + H V V W P L +C S D
Sbjct: 64 PKFGTILASASYDGHVIVWRETGGVWSELMDHT-AHQASVNAVSWAPHEYGALLACASSD 122
Query: 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA---LSFNAKGD-------KLVSCSD 234
+ V +D S + + T E G ++ W+ LS + G KL +
Sbjct: 123 GKVSVLEFKDDGSCDTR-IFTAHEP--GCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGC 179
Query: 235 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GI----IASGAADD 289
D +KIW D G +W T++G+ D T V W+ G+ +AS + D
Sbjct: 180 DNLVKIWAFDA-------GVNNWILEDTLAGHVDWTR-DVAWAPSVGLTKTYLASASQDK 231
Query: 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKI---- 345
+V F+ +K+ DGP K L +EK D+ V WS L S D+ +
Sbjct: 232 NV--FIWTKEG--DGPWQKTPLTEEKFPDIAWR-VSWSLSGNILAVSCGDNKVYLFKESQ 286
Query: 346 --WELANTL 352
W+L N L
Sbjct: 287 NKWQLLNEL 295
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/161 (31%), Positives = 73/161 (45%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKP---TAGVDGVAPV-----FASCSGDKTVR 52
+EF DDG+ + R I T H ++ W P + V G +P A+ D V+
Sbjct: 128 LEFKDDGSCDTR-IFT--AHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVK 184
Query: 53 IWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL----LATASFDATTCIWEDVG-GD 107
IW A W + L H R AW+PS L LA+AS D IW G G
Sbjct: 185 IWAFDAGVNNWILEDTLAG-HVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGP 243
Query: 108 YECVATLEGHENEVK-SVSWNASGTLLA-TCGRDKSVWIWE 146
++ E ++ VSW+ SG +LA +CG D V++++
Sbjct: 244 WQKTPLTEEKFPDIAWRVSWSLSGNILAVSCG-DNKVYLFK 283
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 211 (79.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 75/259 (28%), Positives = 116/259 (44%)
Query: 1 MEFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE-QSAS 59
+E D + L + T++ H VWSL P DG + V S S DK+ + W Q
Sbjct: 488 LEIFDIASSTL--LDTIKAHDGPVWSLQVHP----DGKSLV--SGSADKSAKFWNFQVVQ 539
Query: 60 SRFWNCKAV---LEEMHTRTVR------SCAWSPSGKLLATASFDATTCIWEDVGGDYEC 110
K L +HTRT++ S +SP +LLA A D T ++ +
Sbjct: 540 EEIPGTKRTTPRLRLVHTRTLKVSDDILSVRFSPDARLLAVALLDNTVKVF--FNDSLKL 597
Query: 111 VATLEGHENEVKS--VSWNASGTLLATCGRDKSVWIWEVMPGNEF-ECVSVLQGHAQDVK 167
L GH+ V + +SW++ L+ TC DK+V +W G +F +C H +
Sbjct: 598 FLNLYGHKLPVLNMDISWDSK--LIVTCSADKTVRLW----GLDFGDCHKSFLAHEDSIM 651
Query: 168 MVQWHPTMDV-----LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF 222
V + P+ + FS S D IK W D D + +Q +S GH IWA++
Sbjct: 652 AVAFVPSNNEGNGHNFFSVSKDRVIKYW-----DGDKFEHIQKLS----GHHGEIWAMAI 702
Query: 223 NAKGDKLVSCSDDLTIKIW 241
+ G+ +V+ S D +I+ W
Sbjct: 703 SHTGEFIVTASHDKSIRTW 721
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNC-KAVLEEMHTRTVRSCAWSPS-----GKLLATASF 94
+ +CS DKTVR+W F +C K+ L H ++ + A+ PS G + S
Sbjct: 619 LIVTCSADKTVRLWGLD----FGDCHKSFLA--HEDSIMAVAFVPSNNEGNGHNFFSVSK 672
Query: 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146
D W+ G +E + L GH E+ +++ + +G + T DKS+ WE
Sbjct: 673 DRVIKYWD--GDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWE 722
Score = 113 (44.8 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 59/255 (23%), Positives = 115/255 (45%)
Query: 106 GDYECVATLE----GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ- 160
GD E TL GH +++SV+ ++ +LA+ S+ +W V N C+ L+
Sbjct: 409 GDVEYNRTLAIDIPGHRTDIRSVALSSDDRMLASASNG-SLKVWNVRTQN---CLRTLEC 464
Query: 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220
G+A + P ++ + D ++++ D S T+ ++ H +W+L
Sbjct: 465 GYALCSAFL---PGDKIVVVGNKDGELEIF---DIASS------TLLDTIKAHDGPVWSL 512
Query: 221 SFNAKGDKLVSCSDDLTIKIWGADITRMQ-SGDGYASWR----HLCTISGYHDRTIFSVH 275
+ G LVS S D + K W + + + G + R H T+ D I SV
Sbjct: 513 QVHPDGKSLVSGSADKSAKFWNFQVVQEEIPGTKRTTPRLRLVHTRTLKVSDD--ILSVR 570
Query: 276 WSREG-IIASGAADDSVQ-FFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333
+S + ++A D++V+ FF +S ++ +K+ + +MD++ W + +L
Sbjct: 571 FSPDARLLAVALLDNTVKVFFNDSLKLFLNLYGHKLPVL-----NMDIS---W---DSKL 619
Query: 334 LASASDDGMIKIWEL 348
+ + S D +++W L
Sbjct: 620 IVTCSADKTVRLWGL 634
Score = 51 (23.0 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 29/115 (25%), Positives = 41/115 (35%)
Query: 17 LEGHTDRVWSLAWK-PT------AGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL 69
L GHTD++ SL + PT AG+ A + D +++W+ ++ +C
Sbjct: 153 LRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQ----HCI--- 205
Query: 70 EEMHTRTVRSCAWS----PSGKLLATASFDATTCIWE-DVGGDYECVATLEGHEN 119
E H WS P T D W D G E G EN
Sbjct: 206 -ETHIAQSNGECWSLGLAPDQSGCITGGNDGELKAWSIDEGAMIEISKEKTGSEN 259
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 212 (79.7 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 66/235 (28%), Positives = 107/235 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE------QSASSRFWNCKA 67
++TL H VWS+A P G F + DK V+ W+ +S+ + + K
Sbjct: 484 METLNAHDGAVWSIALSPDQR--G----FVTGGADKCVKFWDFELVKDESSIQKRLSMKQ 537
Query: 68 VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
V V +SP+ KLLA + D T ++ + +L GH+ V + +
Sbjct: 538 VRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYT--DTLKFFLSLYGHKLPVLCMDIS 595
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
G L+AT D++V IW G +F +C L H V +Q+ + F+ DN
Sbjct: 596 YDGALIATGSADRNVKIW----GLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNK 651
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
IK W D+D + +QT+ GH +W L+ + GD +VS S D ++++W
Sbjct: 652 IKQW-----DADKFEHIQTLE----GHHQEVWCLALSPNGDYVVSASHDKSLRLW 697
Score = 159 (61.0 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 58/232 (25%), Positives = 106/232 (45%)
Query: 27 LAWKPTA--GVDGVA---PVFASCSGDKTVRIWEQSASSRF-WNCKAVLEEMHTRTVR-- 78
L + P A G+ G A P F + G++ + + F W+ + + + + +
Sbjct: 8 LRYAPAALFGLVGSARGNPAFVTLRGERGRCVAVPACEHVFVWDARKGEKVLILKGSKHE 67
Query: 79 SCAW-SPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG 137
SC SP G LA D + I+ + G E GH+ V ++ ++ G L +
Sbjct: 68 SCLRPSPDGLHLAVGYEDGSIRIFSLLSG--EASVAFNGHKAAVTALQYDQLGGRLVSGS 125
Query: 138 RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS 197
+D V +W+V+ NE L+GH V V + ++L + D +K WW D
Sbjct: 126 KDTDVIVWDVI--NESGLYR-LKGHKDAVTQVLFLKEKNLLVTSGKDTLVK-WW----DL 177
Query: 198 DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
D HC +T+ GH + +W ++ ++ +L++ + D +++W DIT +Q
Sbjct: 178 DTQHCFKTLV----GHRTEVWGMALVSEEKRLITGTADSELRVW--DITYIQ 223
Score = 53 (23.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 293 FFVESKDDLI---DGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASASDDGMIKIWE 347
FF KD+ I D ++ + E H +V + SP G+ + SAS D +++WE
Sbjct: 643 FFTAGKDNKIKQWDADKFEHIQTLE-GHHQEVWCLALSPNGD--YVVSASHDKSLRLWE 698
Score = 41 (19.5 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 15 QTLEGHTDRVWSLA 28
+TL GH VW +A
Sbjct: 184 KTLVGHRTEVWGMA 197
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 197 (74.4 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 68/264 (25%), Positives = 117/264 (44%)
Query: 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRS 79
HTD V+ + DG ASC DKT+++++ + + KA H V
Sbjct: 614 HTDAVYHACFSQ----DGQR--IASCGADKTLQVFKAETGEKLLDIKA-----HEDEVLC 662
Query: 80 CAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-NASG-TLLATCG 137
CA+S +AT S D IW+ G + V T E H +V + N S LLAT
Sbjct: 663 CAFSSDDSYIATCSVDKKVKIWDS--GTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGS 720
Query: 138 RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS 197
D + +W++ N+ EC + + GH V ++ P ++L SCS D T+K+W +
Sbjct: 721 NDSFLKLWDL---NQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANE 777
Query: 198 DNWHCVQTISESNNGHSSTIWAL----SFNAKGDKLVSCSDD--LTIKIWGADI-TRMQS 250
V+ S+ + + S++A GD+++ + + L + I + + T + +
Sbjct: 778 KKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHT 837
Query: 251 GDGYASWRHLCTISGYHDRTIFSV 274
G + S C S Y + ++
Sbjct: 838 G--HHSTIQYCDFSPYDHLAVIAL 859
Score = 176 (67.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 62/225 (27%), Positives = 103/225 (45%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK--LLATASFDATTCI 100
A+CS DK V+IW+ S + + + EE H+ V C ++ LLAT S D+ +
Sbjct: 673 ATCSVDKKVKIWD-SGTGKLVH---TYEE-HSEQVNCCHFTNKSNHLLLATGSNDSFLKL 727
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160
W D+ EC T+ GH N V ++ LLA+C D ++ +W+V NE + ++V +
Sbjct: 728 W-DLN-QKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKR 785
Query: 161 GHAQDVKMVQWHPTMDVLFSC---SYD-NTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216
+ ++V+ C S D + I V + H ++E + GH ST
Sbjct: 786 FFLSSEDPPE---DVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHST 842
Query: 217 IWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD--GYASWRH 259
I F+ V +++W D +R++ D G+ SW H
Sbjct: 843 IQYCDFSPYDHLAVIALSQYCVELWNID-SRVKVADCRGHLSWVH 886
Score = 158 (60.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 46/180 (25%), Positives = 87/180 (48%)
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
N ++ HT V +S G+ +A+ D T +++ G E + ++ HE+EV
Sbjct: 605 NLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--EKLLDIKAHEDEVLC 662
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSC 181
++++ + +ATC DK V IW+ G + V + H++ V + + +L +
Sbjct: 663 CAFSSDDSYIATCSVDKKVKIWDSGTG---KLVHTYEEHSEQVNCCHFTNKSNHLLLATG 719
Query: 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
S D+ +K+W D + C T+ GH++++ F+ + L SCS D T+K+W
Sbjct: 720 SNDSFLKLW-----DLNQKECRNTMF----GHTNSVTHCRFSPDDELLASCSADGTLKLW 770
Score = 120 (47.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/212 (21%), Positives = 91/212 (42%)
Query: 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100
+ A+ S D +++W+ + C+ + HT +V C +SP +LLA+ S D T +
Sbjct: 715 LLATGSNDSFLKLWDLNQKE----CRNTMFG-HTNSVTHCRFSPDDELLASCSADGTLKL 769
Query: 101 WEDVGGDYECVATL-----------EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149
W+ + + + E E VK SW+A G + ++K V + ++
Sbjct: 770 WDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNK-VLLLDIHT 828
Query: 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209
+ GH ++ + P + +++W + DS V+ +++
Sbjct: 829 SGLL--TEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELW---NIDSR----VK-VADC 878
Query: 210 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
GH S + + F+ G ++ SDD TI++W
Sbjct: 879 R-GHLSWVHGVMFSPDGSSFLTASDDQTIRVW 909
Score = 119 (46.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 59/237 (24%), Positives = 98/237 (41%)
Query: 116 GHENEVKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173
GH+ V+ + + A G L + D VW W+ E+ LQ H + VK +
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT---EEYV---FLQAHQETVK--DFRL 1052
Query: 174 TMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232
D L S S+D T+KVW I H T+ + + ++ K S
Sbjct: 1053 LRDSRLLSWSFDGTVKVWNV---------ITGRIERDFTCHQGTVLSCAISSDATKFSST 1103
Query: 233 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGII-ASGAADDSV 291
S D T KIW ++ S H + G H+ + +S +GI+ A+G + +
Sbjct: 1104 SADKTAKIWSFELP---------SPLH--ELKG-HNSCVRCSAFSLDGILLATGDDNGEI 1151
Query: 292 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ + S L+ + + + H V V +SP +R++L SA G +K W +
Sbjct: 1152 RIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSP-DRKMLVSAG--GYLKWWNV 1205
Score = 80 (33.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 25/106 (23%), Positives = 46/106 (43%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHT---RTVRSCAWSPSGKLLATASFDATTCI 100
S GD+ + + + +L E+HT T++ C +SP L A +
Sbjct: 807 SADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVEL 866
Query: 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146
W ++ + VA GH + V V ++ G+ T D+++ +WE
Sbjct: 867 W-NIDSRVK-VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910
Score = 61 (26.5 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 263 ISGYHDRTIFSVHWSREGIIASGA-ADDSVQFFVESKDDLIDGPSYKML--LKKEKAHDM 319
I+G +R F+ H +G + S A + D+ +F S D S+++ L + K H+
Sbjct: 1073 ITGRIERD-FTCH---QGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNS 1128
Query: 320 DVNSVQWSPGERRLLASASDDGMIKIWELAN 350
V +S + LLA+ D+G I+IW +++
Sbjct: 1129 CVRCSAFSL-DGILLATGDDNGEIRIWNVSD 1158
Score = 55 (24.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 315 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
+ H V+ V +SP L +ASDD I++WE
Sbjct: 879 RGHLSWVHGVMFSPDGSSFL-TASDDQTIRVWE 910
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 185 (70.2 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 54/187 (28%), Positives = 83/187 (44%)
Query: 67 AVLEEM--HTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKS 123
A +EE+ H V S SG+LLAT D +W C+ +L GH + V+S
Sbjct: 15 AAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVES 72
Query: 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
V N L+ + S+ +W++ + + L GH ++ + +HP + + S S
Sbjct: 73 VRLNTPEELIVAGSQSGSIRVWDLEAA---KILRTLMGHKANICSLDFHPYGEFVASGSQ 129
Query: 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243
D IK+W D CV GHS + L F+ G L S +DD T+K+W
Sbjct: 130 DTNIKLW-----DIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 180
Query: 244 DITRMQS 250
+M S
Sbjct: 181 TAGKMMS 187
Score = 134 (52.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 56 QSASSRFWNCKA--VLEEM--HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECV 111
QS S R W+ +A +L + H + S + P G+ +A+ S D +W D+ CV
Sbjct: 87 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW-DIRRK-GCV 144
Query: 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171
GH V+ + ++ G LA+ D +V +W++ G + +S GH V +V++
Sbjct: 145 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG---KMMSEFPGHTGPVNVVEF 201
Query: 172 HP 173
HP
Sbjct: 202 HP 203
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 206 (77.6 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 85/322 (26%), Positives = 143/322 (44%)
Query: 53 IWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLLATASFDATTCIWE-DVGGDYEC 110
I+ A SR C A + H + + ++SP S + + S D+T IW+ D G
Sbjct: 131 IFRVKAVSR---CSASIAG-HGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLH- 185
Query: 111 VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170
TL+GH + V +VS++ +G ++AT D +V IW+ G + L+GH + + +
Sbjct: 186 --TLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALG--APLKGHVKWITSLA 241
Query: 171 WHPTM------DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224
W P L S S D+T+++W D S V + GH ++ + +
Sbjct: 242 WEPYHLQQSGHPRLASASKDSTVRIW---DVISKRADIVLS------GHKGSVTCVRWGG 292
Query: 225 KGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASW-RHLCTIS------GYHDRT------ 270
G K+ + S D TIK+W + T +Q+ +A HL + YHD T
Sbjct: 293 TG-KIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPES 351
Query: 271 -IFSVHWSREGIIASGAADDS-VQFFVESKDD----LIDGPSYKMLLKKEKAHDMDVNSV 324
V +++ + ++ V+ V + DD L D S + + H +VN V
Sbjct: 352 DADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHV 411
Query: 325 QWSPGERRLLASASDDGMIKIW 346
+SP + +ASA D +K+W
Sbjct: 412 TFSP-DMAYIASAGFDNHVKLW 432
Score = 204 (76.9 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 94/361 (26%), Positives = 161/361 (44%)
Query: 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR 75
++ GH + + + ++ P + + S SGD T RIW+ + K HT
Sbjct: 143 SIAGHGEAILATSFSPVS-----SSTMVSGSGDSTARIWDCDTGTPLHTLKG-----HTS 192
Query: 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-----SG 130
V + ++SP+G ++AT S D T IW+ G A L+GH + S++W SG
Sbjct: 193 WVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQ-ALGAPLKGHVKWITSLAWEPYHLQQSG 251
Query: 131 -TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189
LA+ +D +V IW+V+ VL GH V V+W T + ++ S+D TIKV
Sbjct: 252 HPRLASASKDSTVRIWDVISKR---ADIVLSGHKGSVTCVRWGGTGKI-YTSSHDRTIKV 307
Query: 190 WWAE-----DTDSDNWHCVQTISESNN--------GHSSTIWALSFN----AKG--DKLV 230
W ++ T S + H V ++ S + H+ + + AK +K
Sbjct: 308 WNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKRFEKAA 367
Query: 231 SCSDDLTIKIWGA--DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAA 287
+ ++ + K+ A D T M D +S + + + G H + + V +S + IAS
Sbjct: 368 TINNKIVEKLVSASDDFT-MYLWDPESSSKPVARLLG-HQKEVNHVTFSPDMAYIASAGF 425
Query: 288 DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
D+ V+ + +G K + + H V +S + RLL S+S D +K+W
Sbjct: 426 DNHVKLW--------NGRDGKFITTL-RGHVGAVYQCCFS-ADSRLLVSSSKDTTLKVWN 475
Query: 348 L 348
+
Sbjct: 476 V 476
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 84/357 (23%), Positives = 152/357 (42%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TL+GHT V ++++ P + A+ S D TVRIW+ A L+ H
Sbjct: 184 LHTLKGHTSWVLAVSYSPNGAM------IATGSMDNTVRIWDAKKGQALG---APLKG-H 233
Query: 74 TRTVRSCAWSP-----SGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
+ + S AW P SG LA+AS D+T IW+ + + V L GH+ V V W
Sbjct: 234 VKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIV--LSGHKGSVTCVRWG 291
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187
+G + T D+++ +W G + L HA V + T +L + +D+T
Sbjct: 292 GTGKIY-TSSHDRTIKVWNSQTGT---LIQTLSAHAHRVNHLALS-TDFILRTAYHDHTG 346
Query: 188 KVWWAEDTDSD---------------NWHCVQTISESNNGHSSTIWALSFNAKG-DKLVS 231
KV ++D+D N V+ + +++ + +W ++K +L+
Sbjct: 347 KV---PESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLG 403
Query: 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSV 291
++ + D+ + S G+ + H+ +G + I ++ + + DS
Sbjct: 404 HQKEVNHVTFSPDMAYIASA-GFDN--HVKLWNGRDGKFITTLRGHVGAVYQCCFSADSR 460
Query: 292 QFFVESKDDLIDGPSYKM--LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
SKD + + + L + H +V +V WSP +++ S D I+IW
Sbjct: 461 LLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKV-GSGGKDKAIRIW 516
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 38/143 (26%), Positives = 60/143 (41%)
Query: 3 FLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF 62
+L D + + L GH V + + P AS D V++W +F
Sbjct: 387 YLWDPESSSKPVARLLGHQKEVNHVTFSPDMAY------IASAGFDNHVKLWN-GRDGKF 439
Query: 63 WNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVK 122
L H V C +S +LL ++S D T +W G L GH++EV
Sbjct: 440 IT---TLRG-HVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLS--EDLPGHKDEVF 493
Query: 123 SVSWNASGTLLATCGRDKSVWIW 145
+V W+ G + + G+DK++ IW
Sbjct: 494 AVDWSPDGQKVGSGGKDKAIRIW 516
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 46/155 (29%), Positives = 69/155 (44%)
Query: 203 VQTISESNNGHSSTIWALSFN-AKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRHL 260
V S S GH I A SF+ +VS S D T +IW D T + + G+ SW
Sbjct: 137 VSRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSW--- 193
Query: 261 CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319
+ +V +S G +IA+G+ D++V+ + K + P K H
Sbjct: 194 ----------VLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPL--------KGHVK 235
Query: 320 DVNSVQWSP------GERRLLASASDDGMIKIWEL 348
+ S+ W P G RL ASAS D ++IW++
Sbjct: 236 WITSLAWEPYHLQQSGHPRL-ASASKDSTVRIWDV 269
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 204 (76.9 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 70/276 (25%), Positives = 130/276 (47%)
Query: 85 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW----NASGTLLATCGRDK 140
SGK + T +D T IW + G + + T+ GH +K+V W +G ++T +D+
Sbjct: 114 SGKWILTGCYDNTINIWTNKG---KHILTIPGHTAPIKAVDWLSLDEVNGRFVST-SQDQ 169
Query: 141 SVWIWEV-MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN 199
+ +W+ + N +CVSV +GH + V V P + S+D +K+W AE D+
Sbjct: 170 TAMLWQWNIDSNAVDCVSVCKGHERSVDSVAVSPDAQRFATGSWDTMLKLWSAELEDAVE 229
Query: 200 WHC-------VQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
V+T + GH +I A+ + G L++ S D T+K+W ++ +++
Sbjct: 230 GSAKRAKESGVRTPKMTLQGHRESISAVQW-MDGTTLLTGSWDHTLKVWDLNLEGIKT-- 286
Query: 253 GYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLL 311
+ T +++IF ++S+ +I + +AD +++ + D + S ++
Sbjct: 287 ------EIST-----NKSIFDANFSKLNRLIVTASADKNLRLY----DPRTNQGS--VVR 329
Query: 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347
H+ V +V WS E L S S D K+W+
Sbjct: 330 NTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLWD 365
Score = 173 (66.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 74/307 (24%), Positives = 132/307 (42%)
Query: 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE 71
+ I T+ GHT + ++ W +D V F S S D+T +W+ + S +C +V +
Sbjct: 135 KHILTIPGHTAPIKAVDW---LSLDEVNGRFVSTSQDQTAMLWQWNIDSNAVDCVSVCKG 191
Query: 72 MHTRTVRSCAWSPSGKLLATASFDATTCIW----ED-VGGDYECVA---------TLEGH 117
H R+V S A SP + AT S+D +W ED V G + TL+GH
Sbjct: 192 -HERSVDSVAVSPDAQRFATGSWDTMLKLWSAELEDAVEGSAKRAKESGVRTPKMTLQGH 250
Query: 118 ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177
+ +V W GT L T D ++ +W++ E + + + + +
Sbjct: 251 RESISAVQW-MDGTTLLTGSWDHTLKVWDL----NLEGIKTEISTNKSIFDANFSKLNRL 305
Query: 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL-VSCSDDL 236
+ + S D ++++ D ++ V+ + GH++ + + ++ + L VS S D
Sbjct: 306 IVTASADKNLRLY---DPRTNQGSVVRN---TYLGHNAWVQTVMWSTTEEFLFVSGSYDN 359
Query: 237 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 296
K+W R Y + G H + + WS I SG AD++V+ F +
Sbjct: 360 QNKLWDC---RSPKAPLY-------DLLG-HGEKVLDIDWSNPKYIVSGGADNTVRVF-K 407
Query: 297 SKDDLID 303
S+ +D
Sbjct: 408 SRKATVD 414
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 209 (78.6 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 62/216 (28%), Positives = 98/216 (45%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + +A PT P + S D +++W+ W+C
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQ------PFILTSSDDMLIKLWDWDKK---WSCS 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
V E HT V +P A+AS D T +W+ +G TLEGHE V +
Sbjct: 136 QVFEG-HTHYVMQIVINPKDNNQFASASLDRTIKVWQ-LGSSSPNF-TLEGHEKGVNCID 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ + G L + D+ V IW+ N+ CV +GHAQ+V +HP + ++ + S
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQ--NK-TCVQTPEGHAQNVSCATFHPELPIIITGSE 249
Query: 184 DNTIKVWWA-----EDT---DSDNWHCVQTISESNN 211
D T+++W + E T + CV ++ SNN
Sbjct: 250 DGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 285
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 50/197 (25%), Positives = 90/197 (45%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +R A P+ + T+S D +W D + C EGH + V + N
Sbjct: 96 EAHSDYIRCIAVHPTQPFILTSSDDMLIKLW-DWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
A+ D+++ +W++ G+ + L+GH + V + ++ D L S + D +
Sbjct: 155 NNQFASASLDRTIKVWQL--GSSSPNFT-LEGHEKGVNCIDYYSGGDKPYLISGADDRLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT GH+ + +F+ + +++ S+D T++IW + R
Sbjct: 212 KIW-----DYQNKTCVQT----PEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYR 262
Query: 248 MQSGDGYASWRHLCTIS 264
++S Y R C S
Sbjct: 263 LESTLNYGMERVWCVAS 279
Score = 139 (54.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 44/177 (24%), Positives = 75/177 (42%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
K L M R V+S P+ + + ++ + C+W V T E + V++
Sbjct: 8 KRKLTAMSDR-VKSVDLHPTEPWMLASLYNGSVCVWNHE--TQTLVKTFEVCDLPVRAAK 64
Query: 126 WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 185
+ A + T D + ++ N E V + + H+ ++ + HPT + + S D
Sbjct: 65 FVARKNWVVTGADDMQIRVFNY---NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIW 241
IK+W D D W C Q GH+ + + N K ++ S S D TIK+W
Sbjct: 122 LIKLW---DWDK-KWSCSQVFE----GHTHYVMQIVINPKDNNQFASASLDRTIKVW 170
Score = 56 (24.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 293 FFVESKDD-LIDGPSY--KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
+ + DD L+ Y K ++ + H +V+ + P E ++ + S+DG ++IW
Sbjct: 201 YLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHP-ELPIIITGSEDGTVRIW 256
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 203 (76.5 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 72/253 (28%), Positives = 122/253 (48%)
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
++VL HT +VRS +S G+ L TAS D + +W V + + TL H N V+
Sbjct: 94 ESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWS-VHRQ-KIICTLREHNNWVRCAR 151
Query: 126 WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 185
++ G L+ + D++V +W+ G++ V +HP+ + + S DN
Sbjct: 152 FSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSS---YVDFHPSSTCIATASSDN 208
Query: 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245
T++VW D + H T+ + HS+ + ALSF+ G+ L++ S D T+KI D+
Sbjct: 209 TVRVW---DIRT---H---TLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKI--LDL 257
Query: 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDG 304
+G R L T+ G H + V +SR G AS +D V + + D +D
Sbjct: 258 L-----EG----RLLYTLHG-HQGSASCVSFSRSGDQFASAGSDQQVMVW-RTNFDSVD- 305
Query: 305 PSYKMLLKKEKAH 317
Y +L++++ H
Sbjct: 306 --YSRVLQQKRDH 316
Score = 188 (71.2 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 52/172 (30%), Positives = 83/172 (48%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH D V + + P+A + AS S DKTVR+W S ++VL HT +VR
Sbjct: 58 GHKDAVTCVQFSPSAHL------LASSSRDKTVRLWVPSVKG-----ESVLFRAHTGSVR 106
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S +S G+ L TAS D + +W V + + TL H N V+ ++ G L+ +
Sbjct: 107 SVCFSADGQSLLTASDDQSIKLWS-VHRQ-KIICTLREHNNWVRCARFSPDGQLMVSVSD 164
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
D++V +W+ G++ V +HP+ + + S DNT++VW
Sbjct: 165 DRTVKLWDASSRQLIHTFCEPGGYSS---YVDFHPSSTCIATASSDNTVRVW 213
Score = 185 (70.2 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 82/302 (27%), Positives = 129/302 (42%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + S +SPSGK +A+ S DA+ +W T GH++ V V ++ S L
Sbjct: 17 HRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFT--GHKDAVTCVQFSPSAHL 74
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+ RDK+V +W +P + E V + + H V+ V + L + S D +IK+W
Sbjct: 75 LASSSRDKTVRLW--VPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW-- 129
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM---- 248
C T+ E NN + F+ G +VS SDD T+K+W A ++
Sbjct: 130 -SVHRQKIIC--TLREHNNW----VRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTF 182
Query: 249 -QSGDGYASWR--H---LCTISGYHDRTI----FSVHWSREGIIASGAADDSVQF----- 293
+ G GY+S+ H C + D T+ H + AA +++ F
Sbjct: 183 CEPG-GYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGN 241
Query: 294 --FVESKD------DLIDGPSYKMLLKKEKAHDMDVNSVQWS-PGERRLLASASDDGMIK 344
S D DL++G LL H + V +S G++ ASA D +
Sbjct: 242 HLLTASSDSTLKILDLLEG----RLLYTLHGHQGSASCVSFSRSGDQ--FASAGSDQQVM 295
Query: 345 IW 346
+W
Sbjct: 296 VW 297
Score = 181 (68.8 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 62/215 (28%), Positives = 96/215 (44%)
Query: 4 LDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW 63
LDD E + +GH D + SL + P+ AS S D +V +W SR +
Sbjct: 5 LDDPTLE----RNFKGHRDAITSLDFSPSG------KQIASGSVDASVMVWNMKPQSRAY 54
Query: 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW-EDVGGDYECVATLEGHENEVK 122
H V +SPS LLA++S D T +W V G E V H V+
Sbjct: 55 RFTG-----HKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKG--ESVL-FRAHTGSVR 106
Query: 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182
SV ++A G L T D+S+ +W V + + + L+ H V+ ++ P ++ S S
Sbjct: 107 SVCFSADGQSLLTASDDQSIKLWSV---HRQKIICTLREHNNWVRCARFSPDGQLMVSVS 163
Query: 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217
D T+K+W D+ + + T E G+SS +
Sbjct: 164 DDRTVKLW-----DASSRQLIHTFCEPG-GYSSYV 192
Score = 151 (58.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 47/189 (24%), Positives = 88/189 (46%)
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174
+GH + + S+ ++ SG +A+ D SV +W + P + GH V VQ+ P+
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSR---AYRFTGHKDAVTCVQFSPS 71
Query: 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234
+L S S D T+++W V+ S H+ ++ ++ F+A G L++ SD
Sbjct: 72 AHLLASSSRDKTVRLWVPS---------VKGESVLFRAHTGSVRSVCFSADGQSLLTASD 122
Query: 235 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD-SVQF 293
D +IK+W ++ +CT+ H+ + +S +G + +DD +V+
Sbjct: 123 DQSIKLWSVHRQKI-----------ICTLRE-HNNWVRCARFSPDGQLMVSVSDDRTVKL 170
Query: 294 FVESKDDLI 302
+ S LI
Sbjct: 171 WDASSRQLI 179
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102
A+ S D TVR+W+ + + ++H+ V + ++ PSG L TAS D+T I +
Sbjct: 202 ATASSDNTVRVWDIRTHTLLQHY-----QVHSAAVNALSFHPSGNHLLTASSDSTLKILD 256
Query: 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW 145
+ G + TL GH+ VS++ SG A+ G D+ V +W
Sbjct: 257 LLEG--RLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 44 (20.5 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 334 LASASDDGMIKIWEL-ANTL 352
+A+AS D +++W++ +TL
Sbjct: 201 IATASSDNTVRVWDIRTHTL 220
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 206 (77.6 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 79/277 (28%), Positives = 126/277 (45%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
VR+ A+SP GK L T + D +W D+ + GHE ++ S+ ++ +G + +
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLW-DLSTQ-KVRYVFSGHEQDIYSLDFSHNGRFIVSG 420
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D++ +W+V G +C+ L+ V + P + S D I+VW T
Sbjct: 421 SGDRTARLWDVETG---QCILKLEIE-NGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT- 475
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS 256
+ E GH ++++++F+ L+S S D TIK+W TR G
Sbjct: 476 ---------LVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATR-SVGLSAIK 525
Query: 257 WRHLC--TISGYHDRTIFSVHWS---REGIIASGAADDSVQFFVESKDDLIDGPSYKMLL 311
+C T +G+ D + SV S R G+ SG+ D S+QF+ DL G SY
Sbjct: 526 PEGICKATYTGHTD-FVLSVAVSPDSRWGL--SGSKDRSMQFW-----DLQTGQSYLTC- 576
Query: 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
+ H V SV +SP R+ AS S D +IW +
Sbjct: 577 ---QGHKNSVISVCFSPDGRQF-ASGSGDLRARIWSI 609
Score = 179 (68.1 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 62/245 (25%), Positives = 115/245 (46%)
Query: 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD 107
D+ +++W+ S + V H + + S +S +G+ + + S D T +W+ G
Sbjct: 381 DRQIKLWDLSTQK----VRYVFSG-HEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETG- 434
Query: 108 YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167
+C+ LE EN V +++ + + +A D+ + +W V G V L+GH + V
Sbjct: 435 -QCILKLE-IENGVTAIAISPNDQFIAVGSLDQIIRVWSVS-GT---LVERLEGHKESVY 488
Query: 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT--ISESN-NGHSSTIWALSFNA 224
+ + P +L S S D TIKVW + T S ++ I ++ GH+ + +++ +
Sbjct: 489 SIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSP 548
Query: 225 KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IA 283
+S S D +++ W +Q+G Y T G H ++ SV +S +G A
Sbjct: 549 DSRWGLSGSKDRSMQFWD-----LQTGQSYL------TCQG-HKNSVISVCFSPDGRQFA 596
Query: 284 SGAAD 288
SG+ D
Sbjct: 597 SGSGD 601
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/210 (26%), Positives = 90/210 (42%)
Query: 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103
S SGD+T R+W+ C LE + V + A SP+ + +A S D +W
Sbjct: 419 SGSGDRTARLWDVETGQ----CILKLEIENG--VTAIAISPNDQFIAVGSLDQIIRVWS- 471
Query: 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN---------EFE 154
V G V LEGH+ V S++++ ++L + DK++ +WE+ E
Sbjct: 472 VSGTL--VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGI 529
Query: 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
C + GH V V P S S D +++ W + T C GH
Sbjct: 530 CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQ-TGQSYLTC--------QGHK 580
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGAD 244
+++ ++ F+ G + S S DL +IW D
Sbjct: 581 NSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 44/147 (29%), Positives = 67/147 (45%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN--------C 65
++ LEGH + V+S+A+ P + + S S DKT+++WE A+ C
Sbjct: 477 VERLEGHKESVYSIAFSPDSSI------LLSGSLDKTIKVWELQATRSVGLSAIKPEGIC 530
Query: 66 KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE-DVGGDYECVATLEGHENEVKSV 124
KA HT V S A SP + + S D + W+ G Y T +GH+N V SV
Sbjct: 531 KATYTG-HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSY---LTCQGHKNSVISV 586
Query: 125 SWNASGTLLATCGRDKSVWIWEVMPGN 151
++ G A+ D IW + P +
Sbjct: 587 CFSPDGRQFASGSGDLRARIWSIDPAS 613
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 44/168 (26%), Positives = 69/168 (41%)
Query: 36 DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM---HTRTVRSCAWSPSGKLLATA 92
+GV + S D+ + + R W+ L E H +V S A+SP +L +
Sbjct: 444 NGVTAIAIS-PNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSG 502
Query: 93 SFDATTCIWE-----DVG-----GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSV 142
S D T +WE VG + C AT GH + V SV+ + + +D+S+
Sbjct: 503 SLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSM 562
Query: 143 WIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
W++ G + QGH V V + P S S D ++W
Sbjct: 563 QFWDLQTGQSY---LTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 203 (76.5 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 65/256 (25%), Positives = 119/256 (46%)
Query: 114 LEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEV--MPGNE--FECVSVLQGHAQDVK 167
L GH+ E +SWN + G LL+ D ++ +W++ P + ++ GH V+
Sbjct: 177 LRGHQKEGYGLSWNPNLNGYLLSASD-DHTICLWDINATPKEHRVIDAKNIFTGHTAVVE 235
Query: 168 MVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226
V WH + LF S + D + +W DT ++N S + + H++ + LSFN
Sbjct: 236 DVAWHLLHESLFGSVADDQKLMIW---DTRNNN---TSKPSHTVDAHTAEVNCLSFNPYS 289
Query: 227 DKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS--REGIIA 283
+ +++ S D T+ +W D+ ++ L + + D IF V WS E I+A
Sbjct: 290 EFILATGSADKTVALW--DLRNLKL--------KLHSFESHKDE-IFQVQWSPHNETILA 338
Query: 284 SGAADDSVQFFVESK-------DDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS 336
S D + + SK +D DGP + + H ++ W+P E ++ S
Sbjct: 339 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI--HGGHTAKISDFSWNPNEPWIICS 396
Query: 337 ASDDGMIKIWELANTL 352
S+D ++++W++A +
Sbjct: 397 VSEDNIMQVWQMAENV 412
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 60/238 (25%), Positives = 106/238 (44%)
Query: 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS---RFWNCKAVLEEMH 73
L GH + L+W P ++G S S D T+ +W+ +A+ R + K + H
Sbjct: 177 LRGHQKEGYGLSWNPN--LNGY---LLSASDDHTICLWDINATPKEHRVIDAKNIFTG-H 230
Query: 74 TRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNA-SG 130
T V AW + L + + D IW+ + + T++ H EV +S+N S
Sbjct: 231 TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSE 290
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189
+LAT DK+V +W++ + + S + H ++ VQW P + +L S D + V
Sbjct: 291 FILATGSADKTVALWDLR-NLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHV 348
Query: 190 W-----WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIW 241
W E + D + + GH++ I S+N ++ S S+D +++W
Sbjct: 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406
Score = 154 (59.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 51/195 (26%), Positives = 90/195 (46%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GHT V +AW +F S + D+ + IW+ ++ V + HT V
Sbjct: 229 GHTAVVEDVAWHLLH-----ESLFGSVADDQKLMIWDTRNNNTSKPSHTV--DAHTAEVN 281
Query: 79 SCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATC 136
+++P + +LAT S D T +W D+ + + E H++E+ V W+ T+LA+
Sbjct: 282 CLSFNPYSEFILATGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 340
Query: 137 GRDKSVWIWEVMP-GNEF----------ECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYD 184
G D+ + +W++ G E E + + GH + W+P ++ S S D
Sbjct: 341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED 400
Query: 185 NTIKVW-WAEDTDSD 198
N ++VW AE+ +D
Sbjct: 401 NIMQVWQMAENVYND 415
Score = 151 (58.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 62/243 (25%), Positives = 109/243 (44%)
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN---EFECVSVLQ--GHAQDVKMV 169
EG N + + NA T D V+ + P EC L+ GH ++ +
Sbjct: 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGL 187
Query: 170 QWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228
W+P ++ L S S D+TI +W T + H V GH++ + ++++ +
Sbjct: 188 SWNPNLNGYLLSASDDHTICLWDINATPKE--HRVIDAKNIFTGHTAVVEDVAWHLLHES 245
Query: 229 LV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH-DRTIFSVHWSREGIIASGA 286
L S +DD + IW TR + + H T+ + + S + E I+A+G+
Sbjct: 246 LFGSVADDQKLMIWD---TR---NNNTSKPSH--TVDAHTAEVNCLSFNPYSEFILATGS 297
Query: 287 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346
AD +V + DL + K+ L ++H ++ VQWSP +LAS+ D + +W
Sbjct: 298 ADKTVALW-----DL---RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349
Query: 347 ELA 349
+L+
Sbjct: 350 DLS 352
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 52/233 (22%), Positives = 99/233 (42%)
Query: 73 HTRTVRSCAWSPS--GKLLATASFDATTCIWEDVGG---DYECVAT---LEGHENEVKSV 124
H + +W+P+ G LL+ AS D T C+W D+ ++ + GH V+ V
Sbjct: 180 HQKEGYGLSWNPNLNGYLLS-ASDDHTICLW-DINATPKEHRVIDAKNIFTGHTAVVEDV 237
Query: 125 SWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCS 182
+W+ +L + D+ + IW+ N + + H +V + ++P + +L + S
Sbjct: 238 AWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGS 297
Query: 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIW 241
D T+ +W D N ++ S H I+ + ++ + +++ S D + +W
Sbjct: 298 ADKTVALW-----DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349
Query: 242 G-ADITRMQSG-DGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSV 291
+ I QS D L I G H I W+ E I ++D++
Sbjct: 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI 402
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 202 (76.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 57/224 (25%), Positives = 98/224 (43%)
Query: 31 PTAGVDGVAP--VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL 88
P VD A AS S DK++++W ++ HT VR +SP G+L
Sbjct: 104 PVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYR-----HTHWVRCAKFSPDGRL 158
Query: 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148
+ + S D T IW+ + +CV V++N +GT +A+ G D +V IW++
Sbjct: 159 IVSCSEDKTIKIWDTT--NKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIR 216
Query: 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208
+ V H+ V V +HP+ + L + S D T+K+ D + T+
Sbjct: 217 VNKLLQHYQV---HSGGVNCVSFHPSGNYLITASSDGTLKI-----LDLLEGRLIYTLQ- 267
Query: 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
GH+ ++ +SF+ G+ S D + +W + + D
Sbjct: 268 ---GHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNYKD 308
Score = 186 (70.5 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 55/185 (29%), Positives = 88/185 (47%)
Query: 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL 132
H + S +SP+GK LAT S+D +W + + GH++ + SV ++ G L
Sbjct: 17 HKAAITSVDFSPNGKQLATGSWDTFLMLWS-LRPQARAFRYV-GHKDVITSVQFSPLGNL 74
Query: 133 LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192
LA+ RD+++ +W +P + S + H V+ V + L S S D +IKVW
Sbjct: 75 LASASRDRTIRLW--IPDKRGKS-SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW-- 129
Query: 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252
N + Q S H+ + F+ G +VSCS+D TIKIW D T Q +
Sbjct: 130 ------NMYR-QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVN 180
Query: 253 GYASW 257
++ +
Sbjct: 181 NFSDF 185
Score = 175 (66.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 47/172 (27%), Positives = 81/172 (47%)
Query: 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR 78
GH D + S+ + P + AS S D+T+R+W + KA HT VR
Sbjct: 58 GHKDVITSVQFSPLGNL------LASASRDRTIRLWIPDKRGKSSEFKA-----HTAPVR 106
Query: 79 SCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR 138
S +S G+ LA+AS D + +W + + +L H + V+ ++ G L+ +C
Sbjct: 107 SVDFSADGQFLASASEDKSIKVWNMYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 139 DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
DK++ IW+ N+ +CV+ V ++P + S D+T+K+W
Sbjct: 165 DKTIKIWDTT--NK-QCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
Score = 141 (54.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 41/146 (28%), Positives = 68/146 (46%)
Query: 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP-GNEFECVSVLQGHAQDVKMVQWHP 173
+GH+ + SV ++ +G LAT D + +W + P F V GH + VQ+ P
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV----GHKDVITSVQFSP 70
Query: 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233
++L S S D TI++W + S H++ + ++ F+A G L S S
Sbjct: 71 LGNLLASASRDRTIRLWIPDKRGK---------SSEFKAHTAPVRSVDFSADGQFLASAS 121
Query: 234 DDLTIKIWGADITRMQSGDGYASWRH 259
+D +IK+W R Y+ +RH
Sbjct: 122 EDKSIKVWNMYRQRFL----YSLYRH 143
Score = 59 (25.8 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348
LL+ + H VN V + P L+ +AS DG +KI +L
Sbjct: 220 LLQHYQVHSGGVNCVSFHPSGNYLI-TASSDGTLKILDL 257
Score = 47 (21.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 322 NSVQWSPGERRLLASASDDGMIKIWEL 348
N V ++P +ASA D +KIW++
Sbjct: 190 NFVAFNPNGT-CIASAGSDHTVKIWDI 215
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 213 (80.0 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 66/235 (28%), Positives = 111/235 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
++T++ H +WSL+ P G F + DK+V+ W+ + + L
Sbjct: 489 LETIDAHDGALWSLSLSPDQR--G----FVTGGADKSVKFWDFELVKDENSTQKRLSVKQ 542
Query: 74 TRTVRS-----C-AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127
TRT++ C ++SP+ KLLA + D T I+ + +L GH+ V + +
Sbjct: 543 TRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIF--YVDTLKFFLSLYGHKLPVICMDIS 600
Query: 128 ASGTLLATCGRDKSVWIWEVMPGNEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186
G L+AT D++V IW G +F +C L H V +++ P + F+ D
Sbjct: 601 YDGALIATGSADRNVKIW----GLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRK 656
Query: 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241
IK W D+D + +QT+ GH IW L+ + GD +VS S D ++++W
Sbjct: 657 IKQW-----DADKFEHIQTLE----GHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 152 (58.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 51/215 (23%), Positives = 96/215 (44%)
Query: 41 VFASCSGDKTVRIWEQSASSRF-WNCKA-----VLEEMHTRTVRSCAWSPSGKLLATASF 94
VF + G+K + + F W+ + +L+ + C SP G LA
Sbjct: 27 VFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCP-SPDGLHLAVGYE 85
Query: 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154
D + I+ + G+ T GH+ + S+ ++ G LA+ +D + +W+V+ NE
Sbjct: 86 DGSIRIFSLLSGEGN--VTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVI--NESG 141
Query: 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214
L+GH + + ++L + D +K WW D D HC +T+ GH
Sbjct: 142 LYR-LKGHKDAITQALFLREKNLLVTSGKDTMVK-WW----DLDTQHCFKTMV----GHR 191
Query: 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249
+ +W L ++ +L++ + D ++ W DI+ +Q
Sbjct: 192 TEVWGLVLVSEEKRLITGASDSELRAW--DISYLQ 224
Score = 45 (20.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 293 FFVESKDDLI---DGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASASDDGMIKIWE 347
FF KD I D ++ + E H ++ + SP G+ + S+S D +++WE
Sbjct: 648 FFTAGKDRKIKQWDADKFEHIQTLE-GHHQEIWCLAVSPSGD--YVVSSSHDKSLRLWE 703
Score = 43 (20.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 20/81 (24%), Positives = 36/81 (44%)
Query: 281 IIASGAADDSVQFF-VESKDDLIDGPSYKMLLKKEKA---------HDMDVNSVQWSPGE 330
I+A D ++ F + SK+++ KM K+KA D++VN E
Sbjct: 293 ILACHGTDSVLEVFCILSKEEIQKKMDKKMKKAKKKAKLNSCNEEEEDLEVNVKMTLQDE 352
Query: 331 RRLLASASDDGMIKIWELANT 351
+ +A+ IK ++L +T
Sbjct: 353 IQRVANIKTSAKIKSFDLIHT 373
Score = 37 (18.1 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 15 QTLEGHTDRVWSL 27
+T+ GH VW L
Sbjct: 185 KTMVGHRTEVWGL 197
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 204 (76.9 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 62/189 (32%), Positives = 87/189 (46%)
Query: 8 NYE-LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66
NY L + E H+D + SL PT P S S D V++W+ W K
Sbjct: 85 NYNTLERVHQFEAHSDYLRSLVVHPTL------PYVISSSDDMLVKMWDWDNK---WAMK 135
Query: 67 AVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125
E HT V A +P ATAS D T +W+ G + TLEGHE V V
Sbjct: 136 QSFEG-HTHYVMQIAINPKDNNTFATASLDKTVKVWQ-FGSNVPNF-TLEGHEKGVNCVD 192
Query: 126 WNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183
+ G + + D V IW+ N+ CV L GHAQ+V V +HP + ++ + S
Sbjct: 193 YYHGGEKPYIISGADDHLVKIWDYQ--NK-TCVQTLDGHAQNVSSVCFHPELPLIITGSE 249
Query: 184 DNTIKVWWA 192
D+T+++W A
Sbjct: 250 DSTVRLWHA 258
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/194 (24%), Positives = 94/194 (48%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS- 129
E H+ +RS P+ + ++S D +W D + + EGH + V ++ N
Sbjct: 96 EAHSDYLRSLVVHPTLPYVISSSDDMLVKMW-DWDNKWAMKQSFEGHTHYVMQIAINPKD 154
Query: 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTI 187
AT DK+V +W+ G+ + L+GH + V V ++ + + S + D+ +
Sbjct: 155 NNTFATASLDKTVKVWQF--GSNVPNFT-LEGHEKGVNCVDYYHGGEKPYIISGADDHLV 211
Query: 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247
K+W D N CVQT+ +GH+ + ++ F+ + +++ S+D T+++W A+ R
Sbjct: 212 KIW-----DYQNKTCVQTL----DGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYR 262
Query: 248 MQSGDGYASWRHLC 261
+++ Y R C
Sbjct: 263 LETTLNYGLERVWC 276
Score = 48 (22.0 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG--YASWRHLCTISGYHDRTI 271
S+T + N K K + SD + I G + ++S + + W + + T
Sbjct: 411 SATNVKIKKNFKDHKSIR-SDMVLEGISGGPLLALRSNNSLCFFDWESAVLVRRI-EITS 468
Query: 272 FSVHWSREGIIASGAADDSVQFFV 295
S++WS G + + DDS F+V
Sbjct: 469 KSIYWSDNGEMVAICGDDS--FYV 490
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 195 (73.7 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 53/169 (31%), Positives = 79/169 (46%)
Query: 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136
+ S A+SP GK LA+ + D I++ G + + TLEGH ++S++++ LL T
Sbjct: 133 ILSIAYSPDGKYLASGAIDGIINIFDIATG--KLLHTLEGHAMPIRSLTFSPDSQLLVTA 190
Query: 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196
D + I++V N L GHA V V + P S S D ++KVW D
Sbjct: 191 SDDGYIKIYDVQHAN---LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW-----D 242
Query: 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245
CV T + H +W + +N G K+VS DD I I+ I
Sbjct: 243 VGTRTCVHTFFD----HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCPI 287
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 37/120 (30%), Positives = 54/120 (45%)
Query: 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG 130
E H +RS +SP +LL TAS D I+ DV TL GH + V +V++
Sbjct: 169 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIY-DVQ-HANLAGTLSGHASWVLNVAFCPDD 226
Query: 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
T + DKSV +W+V G CV H V V+++ + S D I ++
Sbjct: 227 THFVSSSSDKSVKVWDV--GTR-TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH 73
+ TLEGH + SL + P + + + S D ++I++ + N L H
Sbjct: 165 LHTLEGHAMPIRSLTFSPDS------QLLVTASDDGYIKIYDVQHA----NLAGTLSG-H 213
Query: 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL 133
V + A+ P ++S D + +W DVG CV T H+++V V +N +G+ +
Sbjct: 214 ASWVLNVAFCPDDTHFVSSSSDKSVKVW-DVG-TRTCVHTFFDHQDQVWGVKYNGNGSKI 271
Query: 134 ATCGRDKSVWIWE 146
+ G D+ + I++
Sbjct: 272 VSVGDDQEIHIYD 284
WARNING: HSPs involving 1163 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 352 352 0.00078 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1413
No. of states in DFA: 627 (67 KB)
Total size of DFA: 309 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.39u 0.10s 30.49t Elapsed: 00:00:02
Total cpu time: 30.63u 0.11s 30.74t Elapsed: 00:00:02
Start: Mon May 20 23:53:39 2013 End: Mon May 20 23:53:41 2013
WARNINGS ISSUED: 2