Query 018675
Match_columns 352
No_of_seqs 202 out of 2338
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 03:05:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018675.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018675hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0645 WD40 repeat protein [G 100.0 2.2E-56 4.7E-61 352.1 35.7 308 11-349 4-311 (312)
2 KOG0271 Notchless-like WD40 re 100.0 4E-48 8.7E-53 318.7 27.3 294 12-351 106-441 (480)
3 KOG0271 Notchless-like WD40 re 100.0 1.2E-44 2.7E-49 298.2 25.7 290 12-347 148-479 (480)
4 KOG0286 G-protein beta subunit 100.0 7.1E-43 1.5E-47 278.5 33.1 294 9-347 43-343 (343)
5 KOG0279 G protein beta subunit 100.0 1.2E-42 2.5E-47 275.6 32.1 305 11-350 5-314 (315)
6 KOG0272 U4/U6 small nuclear ri 100.0 2.7E-43 5.8E-48 293.6 23.1 284 17-347 171-458 (459)
7 KOG0272 U4/U6 small nuclear ri 100.0 1.4E-40 3E-45 277.4 19.3 248 12-294 208-457 (459)
8 KOG0318 WD40 repeat stress pro 100.0 2E-37 4.4E-42 265.0 34.1 307 14-351 140-562 (603)
9 KOG0284 Polyadenylation factor 100.0 2.8E-38 6E-43 262.6 19.9 282 21-350 96-381 (464)
10 KOG0315 G-protein beta subunit 100.0 2.5E-36 5.4E-41 236.1 28.8 278 40-350 11-289 (311)
11 KOG0273 Beta-transducin family 100.0 1.6E-36 3.5E-41 256.4 27.3 292 15-350 173-483 (524)
12 KOG0293 WD40 repeat-containing 100.0 1.6E-36 3.4E-41 252.6 23.9 301 6-349 209-513 (519)
13 KOG0296 Angio-associated migra 100.0 2.1E-35 4.6E-40 242.3 28.7 300 12-350 55-399 (399)
14 KOG0263 Transcription initiati 100.0 3.7E-36 7.9E-41 269.0 24.5 261 7-350 364-650 (707)
15 KOG0279 G protein beta subunit 100.0 5.9E-35 1.3E-39 231.9 27.5 254 12-296 54-312 (315)
16 KOG0318 WD40 repeat stress pro 100.0 2.4E-34 5.2E-39 246.3 32.8 299 15-349 184-602 (603)
17 KOG0285 Pleiotropic regulator 100.0 5E-35 1.1E-39 239.7 27.0 296 12-348 142-438 (460)
18 KOG0265 U5 snRNP-specific prot 100.0 9.1E-35 2E-39 233.0 27.8 292 14-348 40-337 (338)
19 KOG0266 WD40 repeat-containing 100.0 6.6E-34 1.4E-38 259.2 34.4 296 13-349 150-454 (456)
20 KOG0282 mRNA splicing factor [ 100.0 5.7E-36 1.2E-40 253.9 18.8 298 10-347 203-503 (503)
21 KOG0263 Transcription initiati 100.0 2.9E-35 6.2E-40 263.3 24.3 208 14-246 444-651 (707)
22 KOG0295 WD40 repeat-containing 100.0 7.3E-35 1.6E-39 239.1 23.5 291 12-348 99-405 (406)
23 KOG0643 Translation initiation 100.0 1.7E-33 3.6E-38 222.4 27.5 299 16-350 5-318 (327)
24 KOG0645 WD40 repeat protein [G 100.0 2.5E-33 5.5E-38 221.8 28.0 250 18-296 58-310 (312)
25 cd00200 WD40 WD40 domain, foun 100.0 2.4E-32 5.2E-37 234.8 35.3 287 14-347 2-289 (289)
26 PLN00181 protein SPA1-RELATED; 100.0 4.8E-32 1E-36 264.2 39.2 304 17-348 479-792 (793)
27 KOG0291 WD40-repeat-containing 100.0 3.4E-32 7.3E-37 242.1 33.2 302 12-351 298-614 (893)
28 KOG0281 Beta-TrCP (transducin 100.0 1.2E-34 2.7E-39 236.7 15.8 291 13-351 189-479 (499)
29 KOG0319 WD40-repeat-containing 100.0 5.4E-33 1.2E-37 246.7 27.3 293 12-347 314-617 (775)
30 KOG0319 WD40-repeat-containing 100.0 6.4E-33 1.4E-37 246.2 26.6 310 12-351 138-579 (775)
31 KOG0284 Polyadenylation factor 100.0 7.5E-34 1.6E-38 236.3 18.4 258 4-297 115-380 (464)
32 KOG0273 Beta-transducin family 100.0 1.7E-31 3.8E-36 226.0 30.4 279 22-350 236-524 (524)
33 KOG0291 WD40-repeat-containing 100.0 9.4E-31 2E-35 233.0 35.4 300 12-350 136-509 (893)
34 KOG0315 G-protein beta subunit 100.0 7.7E-32 1.7E-36 210.9 24.0 236 87-351 11-247 (311)
35 KOG0313 Microtubule binding pr 100.0 1.3E-31 2.9E-36 221.1 25.1 287 19-349 103-418 (423)
36 KOG0277 Peroxisomal targeting 100.0 2.5E-32 5.4E-37 214.3 19.4 254 11-348 51-308 (311)
37 KOG0292 Vesicle coat complex C 100.0 9.8E-32 2.1E-36 242.9 25.9 299 15-350 3-322 (1202)
38 KOG0313 Microtubule binding pr 100.0 1.8E-31 3.9E-36 220.3 23.5 259 12-296 135-417 (423)
39 KOG0285 Pleiotropic regulator 100.0 1.8E-31 4E-36 218.8 22.2 243 71-351 148-391 (460)
40 KOG0286 G-protein beta subunit 100.0 2.7E-30 5.9E-35 206.7 27.4 242 21-294 97-342 (343)
41 KOG0292 Vesicle coat complex C 100.0 1.1E-30 2.5E-35 236.1 27.1 214 12-245 42-281 (1202)
42 KOG0306 WD40-repeat-containing 100.0 3.3E-30 7.2E-35 229.4 29.3 289 15-350 367-665 (888)
43 KOG0276 Vesicle coat complex C 100.0 3.4E-30 7.3E-35 225.1 27.2 283 16-344 8-294 (794)
44 KOG0300 WD40 repeat-containing 100.0 1.2E-30 2.6E-35 211.1 22.5 306 4-350 131-477 (481)
45 KOG0973 Histone transcription 100.0 4.6E-30 9.9E-35 237.4 28.7 297 19-350 11-356 (942)
46 KOG2096 WD40 repeat protein [G 100.0 7.6E-30 1.6E-34 206.5 25.4 310 13-347 78-400 (420)
47 KOG0276 Vesicle coat complex C 100.0 6.6E-30 1.4E-34 223.3 26.6 212 13-248 47-261 (794)
48 KOG0278 Serine/threonine kinas 100.0 6.7E-31 1.5E-35 205.9 17.6 288 16-349 9-297 (334)
49 KOG0306 WD40-repeat-containing 100.0 3.4E-29 7.4E-34 223.0 30.3 313 3-350 83-581 (888)
50 KOG0316 Conserved WD40 repeat- 100.0 3.2E-29 7E-34 194.8 26.4 287 10-347 6-297 (307)
51 KOG0640 mRNA cleavage stimulat 100.0 4.8E-30 1E-34 207.0 21.3 304 13-348 104-425 (430)
52 KOG0275 Conserved WD40 repeat- 100.0 9.4E-31 2E-35 212.3 16.3 289 19-347 211-507 (508)
53 KOG0295 WD40 repeat-containing 100.0 3.2E-30 6.9E-35 211.9 19.2 255 72-351 106-366 (406)
54 KOG0266 WD40 repeat-containing 100.0 1.1E-28 2.3E-33 225.0 30.2 249 72-350 157-410 (456)
55 KOG0772 Uncharacterized conser 100.0 3.6E-29 7.7E-34 214.3 24.9 304 12-346 158-484 (641)
56 KOG0316 Conserved WD40 repeat- 100.0 7.3E-29 1.6E-33 192.9 22.4 241 72-350 15-258 (307)
57 KOG0647 mRNA export protein (c 100.0 1.9E-28 4E-33 197.0 25.3 284 19-340 25-315 (347)
58 KOG0265 U5 snRNP-specific prot 100.0 1.3E-28 2.9E-33 197.7 24.2 249 70-350 43-297 (338)
59 KOG0264 Nucleosome remodeling 100.0 1.1E-28 2.3E-33 208.5 23.3 262 71-350 121-405 (422)
60 PLN00181 protein SPA1-RELATED; 100.0 1.7E-27 3.7E-32 232.4 33.6 273 48-349 457-738 (793)
61 KOG0277 Peroxisomal targeting 100.0 2E-28 4.4E-33 192.4 21.6 246 25-350 12-266 (311)
62 KOG0301 Phospholipase A2-activ 100.0 2.7E-28 5.9E-33 215.6 24.9 281 12-350 5-289 (745)
63 KOG0281 Beta-TrCP (transducin 100.0 1.2E-29 2.6E-34 207.6 14.2 257 3-297 213-477 (499)
64 KOG1063 RNA polymerase II elon 100.0 5.7E-28 1.2E-32 213.5 25.4 310 17-350 263-649 (764)
65 KOG0299 U3 snoRNP-associated p 100.0 5.9E-28 1.3E-32 204.2 23.5 305 14-348 135-455 (479)
66 KOG2445 Nuclear pore complex c 100.0 2.7E-27 5.8E-32 190.9 25.9 275 18-349 10-318 (361)
67 KOG0289 mRNA splicing factor [ 100.0 2.9E-27 6.2E-32 198.7 27.1 285 22-348 220-505 (506)
68 KOG1407 WD40 repeat protein [F 100.0 6.5E-27 1.4E-31 184.6 26.2 288 15-350 14-312 (313)
69 KOG1332 Vesicle coat complex C 100.0 2.4E-28 5.2E-33 190.9 18.0 257 18-298 8-287 (299)
70 KOG0305 Anaphase promoting com 100.0 2.6E-27 5.5E-32 208.7 26.6 267 40-350 189-462 (484)
71 KOG0641 WD40 repeat protein [G 100.0 1.5E-25 3.2E-30 173.7 32.6 304 10-348 22-348 (350)
72 KOG0283 WD40 repeat-containing 100.0 1.1E-27 2.4E-32 216.5 24.0 259 12-296 257-575 (712)
73 KOG0283 WD40 repeat-containing 100.0 6.3E-28 1.4E-32 218.0 21.2 246 72-348 265-575 (712)
74 KOG0294 WD40 repeat-containing 100.0 5.5E-27 1.2E-31 189.6 24.2 247 10-350 32-282 (362)
75 KOG0288 WD40 repeat protein Ti 100.0 2.2E-28 4.8E-33 204.1 16.4 291 13-347 167-459 (459)
76 KOG0274 Cdc4 and related F-box 100.0 1E-26 2.2E-31 212.0 28.7 276 20-351 207-484 (537)
77 PTZ00421 coronin; Provisional 100.0 2.3E-26 5E-31 209.3 30.9 212 16-245 70-291 (493)
78 KOG1332 Vesicle coat complex C 100.0 7.7E-28 1.7E-32 188.1 17.9 256 69-348 6-285 (299)
79 PTZ00421 coronin; Provisional 100.0 4.2E-26 9.2E-31 207.6 31.9 207 20-244 19-245 (493)
80 KOG0268 Sof1-like rRNA process 100.0 6.5E-28 1.4E-32 198.3 17.4 286 12-348 57-344 (433)
81 cd00200 WD40 WD40 domain, foun 100.0 8.9E-26 1.9E-30 193.8 31.6 243 72-350 7-250 (289)
82 KOG0278 Serine/threonine kinas 100.0 4.8E-28 1E-32 189.9 15.4 248 12-298 50-298 (334)
83 KOG0282 mRNA splicing factor [ 100.0 6.2E-28 1.3E-32 205.2 17.3 248 12-294 249-502 (503)
84 KOG0643 Translation initiation 100.0 1E-26 2.2E-31 184.1 22.2 219 12-244 43-317 (327)
85 KOG1063 RNA polymerase II elon 100.0 2.4E-26 5.3E-31 203.3 26.0 325 7-350 177-603 (764)
86 KOG1446 Histone H3 (Lys4) meth 100.0 3E-24 6.5E-29 174.2 33.5 292 12-348 5-302 (311)
87 KOG0973 Histone transcription 100.0 2.2E-26 4.8E-31 213.2 24.0 256 12-299 60-357 (942)
88 KOG0310 Conserved WD40 repeat- 100.0 5.6E-26 1.2E-30 193.6 24.4 277 21-345 26-305 (487)
89 PTZ00420 coronin; Provisional 100.0 4.5E-25 9.7E-30 201.9 31.5 216 12-245 65-294 (568)
90 KOG0296 Angio-associated migra 100.0 7E-26 1.5E-30 186.6 23.4 251 71-350 61-317 (399)
91 PTZ00420 coronin; Provisional 99.9 7.1E-25 1.5E-29 200.7 31.5 250 44-329 49-317 (568)
92 KOG0264 Nucleosome remodeling 99.9 8.2E-26 1.8E-30 191.1 23.0 265 19-298 122-405 (422)
93 KOG0293 WD40 repeat-containing 99.9 8.7E-26 1.9E-30 188.7 22.6 247 71-351 221-472 (519)
94 KOG0650 WD40 repeat nucleolar 99.9 1.9E-25 4.1E-30 194.7 25.4 301 7-346 386-732 (733)
95 KOG1408 WD40 repeat protein [F 99.9 1.4E-25 3.1E-30 199.2 24.0 306 16-350 364-714 (1080)
96 KOG0275 Conserved WD40 repeat- 99.9 3.4E-26 7.5E-31 185.9 16.6 249 72-350 211-468 (508)
97 KOG0289 mRNA splicing factor [ 99.9 7E-25 1.5E-29 184.4 23.5 251 12-294 252-503 (506)
98 KOG0640 mRNA cleavage stimulat 99.9 1.2E-25 2.5E-30 181.8 16.7 212 71-351 109-337 (430)
99 KOG0299 U3 snoRNP-associated p 99.9 7.2E-25 1.6E-29 185.6 22.0 255 71-351 139-412 (479)
100 KOG4283 Transcription-coupled 99.9 2.6E-24 5.6E-29 172.9 23.7 302 19-348 41-364 (397)
101 KOG0274 Cdc4 and related F-box 99.9 2.5E-24 5.5E-29 196.4 26.6 242 14-298 242-483 (537)
102 KOG1036 Mitotic spindle checkp 99.9 1.2E-23 2.5E-28 170.1 26.6 279 21-338 13-293 (323)
103 KOG0301 Phospholipase A2-activ 99.9 1.5E-24 3.3E-29 192.0 23.2 239 14-298 50-289 (745)
104 KOG0639 Transducin-like enhanc 99.9 1.4E-24 3.1E-29 185.7 21.5 292 12-349 411-704 (705)
105 KOG1539 WD repeat protein [Gen 99.9 3.1E-23 6.7E-28 187.3 30.6 315 12-351 193-608 (910)
106 KOG0300 WD40 repeat-containing 99.9 1.6E-24 3.5E-29 175.7 20.3 257 12-296 181-475 (481)
107 KOG0310 Conserved WD40 repeat- 99.9 4.3E-24 9.3E-29 182.2 23.7 240 17-294 64-306 (487)
108 KOG0641 WD40 repeat protein [G 99.9 6.9E-23 1.5E-27 158.9 27.4 254 14-296 82-348 (350)
109 KOG0308 Conserved WD40 repeat- 99.9 1E-24 2.3E-29 191.8 19.6 281 38-349 36-327 (735)
110 KOG0305 Anaphase promoting com 99.9 9.7E-24 2.1E-28 186.2 24.8 239 20-296 216-460 (484)
111 KOG0772 Uncharacterized conser 99.9 6E-25 1.3E-29 188.5 15.3 213 13-241 260-484 (641)
112 KOG0269 WD40 repeat-containing 99.9 4.6E-25 1E-29 197.5 15.0 236 26-291 92-334 (839)
113 KOG1407 WD40 repeat protein [F 99.9 3.5E-23 7.6E-28 163.6 22.7 234 16-288 59-293 (313)
114 KOG0308 Conserved WD40 repeat- 99.9 6.7E-24 1.5E-28 186.7 19.2 211 14-245 66-286 (735)
115 KOG0647 mRNA export protein (c 99.9 8E-23 1.7E-27 164.8 23.4 249 73-349 26-281 (347)
116 KOG0288 WD40 repeat protein Ti 99.9 1.1E-24 2.4E-29 182.2 12.5 246 71-350 172-418 (459)
117 KOG1446 Histone H3 (Lys4) meth 99.9 7E-22 1.5E-26 160.5 28.4 246 73-351 13-264 (311)
118 KOG2055 WD40 repeat protein [G 99.9 3E-22 6.5E-27 169.9 27.2 310 7-350 196-513 (514)
119 KOG4328 WD40 protein [Function 99.9 9.2E-23 2E-27 172.8 23.6 316 12-350 177-496 (498)
120 KOG0321 WD40 repeat-containing 99.9 1.1E-22 2.3E-27 178.9 24.1 302 27-351 55-393 (720)
121 KOG1007 WD repeat protein TSSC 99.9 7.7E-23 1.7E-27 163.9 19.8 286 15-351 57-363 (370)
122 KOG0302 Ribosome Assembly prot 99.9 1.2E-23 2.6E-28 174.2 15.3 224 10-241 200-435 (440)
123 KOG2106 Uncharacterized conser 99.9 7.4E-21 1.6E-25 163.2 32.1 283 19-347 198-519 (626)
124 KOG0267 Microtubule severing p 99.9 2.5E-24 5.4E-29 191.5 10.9 240 11-287 18-257 (825)
125 KOG0268 Sof1-like rRNA process 99.9 3.4E-23 7.5E-28 170.7 16.3 253 4-298 86-346 (433)
126 KOG0269 WD40 repeat-containing 99.9 4.2E-23 9.2E-28 185.0 18.0 248 25-351 43-298 (839)
127 KOG0646 WD40 repeat protein [G 99.9 5.2E-22 1.1E-26 168.7 23.5 246 41-350 52-308 (476)
128 KOG2106 Uncharacterized conser 99.9 9.9E-22 2.2E-26 168.5 24.0 268 6-348 353-625 (626)
129 KOG1274 WD40 repeat protein [G 99.9 1.8E-21 3.9E-26 177.8 26.0 253 70-350 9-263 (933)
130 KOG0302 Ribosome Assembly prot 99.9 8E-22 1.7E-26 163.5 21.5 265 17-293 147-435 (440)
131 KOG4283 Transcription-coupled 99.9 2.6E-22 5.5E-27 161.4 17.7 222 69-351 38-278 (397)
132 KOG1036 Mitotic spindle checkp 99.9 3E-21 6.5E-26 156.2 23.4 247 74-351 13-264 (323)
133 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 5E-20 1.1E-24 160.3 33.1 272 40-351 2-281 (300)
134 KOG1034 Transcriptional repres 99.9 9.5E-21 2.1E-25 154.5 23.5 319 17-349 34-383 (385)
135 KOG2445 Nuclear pore complex c 99.9 1.2E-20 2.5E-25 152.8 23.5 227 11-244 49-318 (361)
136 KOG0267 Microtubule severing p 99.9 6.7E-23 1.4E-27 182.5 11.0 253 40-339 5-258 (825)
137 KOG1274 WD40 repeat protein [G 99.9 6.1E-20 1.3E-24 167.9 29.2 269 18-332 10-284 (933)
138 KOG2048 WD40 repeat protein [G 99.9 2.8E-19 6.2E-24 158.6 31.7 293 21-348 25-318 (691)
139 KOG2048 WD40 repeat protein [G 99.9 1.5E-19 3.2E-24 160.4 29.8 251 73-349 24-275 (691)
140 KOG4227 WD40 repeat protein [G 99.9 1.3E-20 2.8E-25 157.3 21.6 318 16-350 51-388 (609)
141 KOG1009 Chromatin assembly com 99.9 3.7E-20 8E-25 155.0 24.0 298 21-348 13-371 (434)
142 KOG0270 WD40 repeat-containing 99.9 1.4E-20 3E-25 159.2 20.7 206 26-244 178-404 (463)
143 KOG0294 WD40 repeat-containing 99.9 2E-20 4.3E-25 151.9 19.4 207 13-246 75-283 (362)
144 KOG1539 WD repeat protein [Gen 99.9 2.4E-19 5.1E-24 162.4 28.0 309 13-347 236-646 (910)
145 KOG0646 WD40 repeat protein [G 99.9 2.8E-20 6.2E-25 158.2 20.7 209 22-245 82-308 (476)
146 KOG2096 WD40 repeat protein [G 99.9 1.5E-20 3.3E-25 152.8 17.7 218 112-349 80-308 (420)
147 KOG1445 Tumor-specific antigen 99.9 4.1E-20 8.8E-25 162.9 21.6 130 12-148 70-200 (1012)
148 KOG1273 WD40 repeat protein [G 99.9 2.3E-19 5.1E-24 145.8 23.6 290 24-350 26-323 (405)
149 KOG1523 Actin-related protein 99.9 1.6E-19 3.5E-24 147.0 22.0 253 74-341 10-270 (361)
150 KOG0270 WD40 repeat-containing 99.9 3.2E-20 7E-25 157.0 16.5 207 17-244 239-449 (463)
151 KOG1408 WD40 repeat protein [F 99.9 5.8E-19 1.3E-23 157.6 24.9 292 26-350 329-672 (1080)
152 KOG0639 Transducin-like enhanc 99.8 3.6E-20 7.8E-25 159.0 15.9 244 72-350 417-664 (705)
153 KOG1523 Actin-related protein 99.8 1.8E-18 3.9E-23 141.0 23.4 218 20-245 9-237 (361)
154 KOG1273 WD40 repeat protein [G 99.8 1.3E-18 2.9E-23 141.4 22.3 251 77-350 26-281 (405)
155 KOG2919 Guanine nucleotide-bin 99.8 1.2E-18 2.5E-23 142.2 22.0 281 26-339 54-360 (406)
156 KOG0307 Vesicle coat complex C 99.8 2.7E-20 5.9E-25 174.0 13.6 209 22-245 65-285 (1049)
157 KOG0642 Cell-cycle nuclear pro 99.8 1.2E-19 2.6E-24 157.9 15.8 216 13-244 286-561 (577)
158 KOG0321 WD40 repeat-containing 99.8 1.1E-18 2.4E-23 153.9 20.9 255 15-297 94-391 (720)
159 KOG1538 Uncharacterized conser 99.8 5.3E-19 1.1E-23 156.8 17.8 241 12-294 44-290 (1081)
160 KOG0322 G-protein beta subunit 99.8 8.5E-19 1.8E-23 139.2 17.0 258 12-349 5-323 (323)
161 KOG1188 WD40 repeat protein [G 99.8 2.5E-18 5.5E-23 141.2 19.2 286 40-348 41-345 (376)
162 KOG0290 Conserved WD40 repeat- 99.8 1.5E-17 3.2E-22 133.9 21.8 267 10-351 34-320 (364)
163 KOG4378 Nuclear protein COP1 [ 99.8 2.2E-18 4.8E-23 147.9 17.6 265 23-329 36-304 (673)
164 KOG1034 Transcriptional repres 99.8 1.8E-17 3.8E-22 135.6 21.7 271 3-295 71-381 (385)
165 KOG1963 WD40 repeat protein [G 99.8 1.2E-16 2.7E-21 146.0 28.8 310 19-350 203-539 (792)
166 COG2319 FOG: WD40 repeat [Gene 99.8 1.6E-15 3.5E-20 137.4 36.6 296 16-351 60-361 (466)
167 KOG2055 WD40 repeat protein [G 99.8 1.6E-17 3.5E-22 141.5 19.7 244 74-345 213-463 (514)
168 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 1.8E-15 3.9E-20 131.5 33.3 269 13-328 23-300 (300)
169 KOG1517 Guanine nucleotide bin 99.8 7.4E-17 1.6E-21 149.9 25.3 298 25-351 1068-1383(1387)
170 KOG0642 Cell-cycle nuclear pro 99.8 1.5E-18 3.3E-23 151.1 13.4 290 39-351 242-563 (577)
171 KOG0303 Actin-binding protein 99.8 2E-17 4.3E-22 138.4 19.4 209 17-244 77-294 (472)
172 KOG1007 WD repeat protein TSSC 99.8 9.5E-18 2.1E-22 135.0 16.2 223 10-243 111-360 (370)
173 KOG1334 WD40 repeat protein [G 99.8 6.6E-18 1.4E-22 144.7 16.1 316 10-348 131-465 (559)
174 KOG1538 Uncharacterized conser 99.8 6.6E-17 1.4E-21 143.7 22.2 274 23-349 14-293 (1081)
175 KOG4328 WD40 protein [Function 99.8 3.8E-17 8.2E-22 139.1 19.4 222 14-247 227-453 (498)
176 COG2319 FOG: WD40 repeat [Gene 99.8 1.3E-14 2.7E-19 131.5 36.9 293 12-350 146-443 (466)
177 KOG0303 Actin-binding protein 99.8 3.3E-17 7.1E-22 137.1 17.7 209 113-350 76-295 (472)
178 KOG4378 Nuclear protein COP1 [ 99.8 4.9E-17 1.1E-21 139.8 18.6 267 46-350 9-281 (673)
179 KOG0290 Conserved WD40 repeat- 99.8 9E-17 2E-21 129.5 18.9 216 19-245 94-319 (364)
180 PRK11028 6-phosphogluconolacto 99.8 1.3E-14 2.8E-19 128.2 34.4 288 41-349 4-304 (330)
181 KOG0650 WD40 repeat nucleolar 99.8 3.7E-16 8.1E-21 137.2 22.7 245 67-346 393-677 (733)
182 KOG1240 Protein kinase contain 99.8 6.9E-16 1.5E-20 145.6 25.8 328 5-347 1031-1431(1431)
183 KOG0307 Vesicle coat complex C 99.7 5.2E-18 1.1E-22 158.9 10.5 212 12-244 107-327 (1049)
184 KOG1310 WD40 repeat protein [G 99.7 4.2E-17 9.1E-22 141.8 15.3 223 12-244 41-303 (758)
185 KOG1188 WD40 repeat protein [G 99.7 1E-16 2.2E-21 131.9 15.7 270 13-295 62-344 (376)
186 KOG2919 Guanine nucleotide-bin 99.7 6.5E-16 1.4E-20 126.3 19.5 212 22-245 105-328 (406)
187 KOG1587 Cytoplasmic dynein int 99.7 3.1E-15 6.6E-20 136.3 25.7 277 49-350 222-517 (555)
188 KOG1409 Uncharacterized conser 99.7 3.8E-16 8.2E-21 128.7 17.6 224 9-249 12-275 (404)
189 KOG0644 Uncharacterized conser 99.7 2.4E-18 5.3E-23 156.0 5.1 122 10-148 179-300 (1113)
190 KOG1524 WD40 repeat-containing 99.7 3.8E-16 8.2E-21 135.6 17.7 266 19-344 12-281 (737)
191 KOG1009 Chromatin assembly com 99.7 3.4E-15 7.3E-20 125.6 22.6 265 10-299 54-374 (434)
192 KOG1524 WD40 repeat-containing 99.7 4.5E-16 9.8E-21 135.1 16.8 207 39-293 75-282 (737)
193 KOG0771 Prolactin regulatory e 99.7 3.3E-16 7.2E-21 132.3 15.5 199 25-245 148-355 (398)
194 KOG0771 Prolactin regulatory e 99.7 6.6E-16 1.4E-20 130.5 15.7 202 78-349 148-354 (398)
195 KOG1445 Tumor-specific antigen 99.7 1.8E-15 3.9E-20 134.0 17.0 231 46-297 600-844 (1012)
196 KOG1517 Guanine nucleotide bin 99.7 1E-14 2.2E-19 136.0 22.3 260 22-297 1110-1381(1387)
197 KOG1310 WD40 repeat protein [G 99.7 4.4E-15 9.6E-20 129.4 16.8 171 71-244 47-231 (758)
198 KOG1963 WD40 repeat protein [G 99.7 4.9E-13 1.1E-17 122.9 29.3 285 46-348 178-486 (792)
199 KOG0649 WD40 repeat protein [G 99.6 1.1E-12 2.5E-17 103.6 23.8 282 22-347 11-314 (325)
200 PRK11028 6-phosphogluconolacto 99.6 8.1E-12 1.8E-16 110.3 32.3 264 12-297 26-304 (330)
201 PRK01742 tolB translocation pr 99.6 1.6E-13 3.5E-18 125.0 21.4 236 48-329 183-426 (429)
202 KOG1587 Cytoplasmic dynein int 99.6 5E-13 1.1E-17 122.0 22.6 253 21-297 242-516 (555)
203 KOG0649 WD40 repeat protein [G 99.6 4E-12 8.6E-17 100.5 23.9 205 14-244 55-274 (325)
204 KOG2110 Uncharacterized conser 99.5 3.3E-11 7.2E-16 100.8 27.4 185 41-246 58-250 (391)
205 KOG2139 WD40 repeat protein [G 99.5 6.1E-12 1.3E-16 104.9 22.3 187 23-234 100-301 (445)
206 KOG4227 WD40 repeat protein [G 99.5 2.1E-12 4.6E-17 108.6 18.7 164 72-246 54-227 (609)
207 KOG2394 WD40 protein DMR-N9 [G 99.5 2.5E-13 5.5E-18 118.3 13.5 143 20-172 218-383 (636)
208 KOG0322 G-protein beta subunit 99.5 2.4E-13 5.2E-18 108.5 12.3 168 19-192 148-322 (323)
209 PRK01742 tolB translocation pr 99.5 2.4E-12 5.2E-17 117.4 20.4 197 15-243 197-400 (429)
210 KOG1334 WD40 repeat protein [G 99.5 1E-12 2.2E-17 113.4 15.8 269 72-349 140-424 (559)
211 PF08662 eIF2A: Eukaryotic tra 99.5 6E-12 1.3E-16 101.5 19.4 149 78-244 9-179 (194)
212 KOG1064 RAVE (regulator of V-A 99.5 3.2E-13 7E-18 132.1 12.9 192 18-245 2205-2399(2439)
213 KOG2110 Uncharacterized conser 99.5 8.1E-11 1.8E-15 98.5 25.1 241 20-350 4-249 (391)
214 KOG1272 WD40-repeat-containing 99.5 3.8E-13 8.2E-18 115.3 9.8 221 39-296 141-361 (545)
215 KOG2139 WD40 repeat protein [G 99.5 1.1E-10 2.4E-15 97.5 23.8 205 21-236 140-367 (445)
216 KOG2111 Uncharacterized conser 99.4 1.2E-09 2.5E-14 90.0 29.0 238 25-298 9-257 (346)
217 PF08662 eIF2A: Eukaryotic tra 99.4 3.3E-11 7.2E-16 97.2 19.6 111 73-193 58-179 (194)
218 KOG2394 WD40 protein DMR-N9 [G 99.4 3.4E-12 7.5E-17 111.4 13.7 169 42-223 188-383 (636)
219 PRK03629 tolB translocation pr 99.4 4.5E-10 9.7E-15 102.4 27.4 234 50-328 180-427 (429)
220 KOG0974 WD-repeat protein WDR6 99.4 1.4E-11 3E-16 115.4 17.6 190 39-244 99-288 (967)
221 KOG3881 Uncharacterized conser 99.4 8.4E-11 1.8E-15 99.1 19.6 194 40-247 116-323 (412)
222 PF10282 Lactonase: Lactonase, 99.4 5.1E-08 1.1E-12 86.5 37.8 283 49-349 13-322 (345)
223 KOG1240 Protein kinase contain 99.4 5E-10 1.1E-14 106.9 24.8 261 72-351 1046-1336(1431)
224 KOG1354 Serine/threonine prote 99.4 1.3E-10 2.8E-15 96.5 18.1 267 20-296 24-358 (433)
225 PRK03629 tolB translocation pr 99.3 1.8E-09 4E-14 98.4 26.4 197 18-244 195-406 (429)
226 KOG4497 Uncharacterized conser 99.3 3.1E-10 6.8E-15 93.8 18.9 274 19-342 89-425 (447)
227 KOG4497 Uncharacterized conser 99.3 1.3E-10 2.9E-15 95.9 16.7 190 21-242 48-238 (447)
228 PRK02889 tolB translocation pr 99.3 9.2E-10 2E-14 100.4 24.0 160 73-245 194-361 (427)
229 KOG2111 Uncharacterized conser 99.3 7.7E-09 1.7E-13 85.3 26.3 179 49-245 75-257 (346)
230 PRK05137 tolB translocation pr 99.3 4.1E-09 8.8E-14 96.6 27.3 171 50-243 183-365 (435)
231 PRK05137 tolB translocation pr 99.3 1.8E-09 3.9E-14 98.9 24.8 190 15-234 195-396 (435)
232 KOG1272 WD40-repeat-containing 99.3 9E-12 1.9E-16 107.0 8.8 193 77-350 132-324 (545)
233 KOG0644 Uncharacterized conser 99.3 2E-12 4.4E-17 118.2 5.0 159 72-244 188-346 (1113)
234 PRK04922 tolB translocation pr 99.3 2.1E-09 4.5E-14 98.4 24.0 173 49-244 184-368 (433)
235 PF02239 Cytochrom_D1: Cytochr 99.3 8.7E-08 1.9E-12 85.2 32.5 294 13-350 28-348 (369)
236 KOG1354 Serine/threonine prote 99.3 6E-10 1.3E-14 92.6 17.2 271 75-350 26-360 (433)
237 PRK02889 tolB translocation pr 99.3 1.2E-09 2.6E-14 99.7 21.2 191 17-236 191-392 (427)
238 KOG3881 Uncharacterized conser 99.3 3.8E-10 8.2E-15 95.2 16.2 153 39-194 161-321 (412)
239 KOG1064 RAVE (regulator of V-A 99.3 1.5E-10 3.3E-15 114.0 15.6 193 74-302 2208-2403(2439)
240 PRK04922 tolB translocation pr 99.3 2.6E-09 5.7E-14 97.7 23.1 198 16-243 198-410 (433)
241 COG2706 3-carboxymuconate cycl 99.3 7E-08 1.5E-12 81.3 28.9 284 48-350 15-322 (346)
242 PF02239 Cytochrom_D1: Cytochr 99.2 2.3E-07 4.9E-12 82.5 32.5 284 40-350 6-303 (369)
243 KOG0280 Uncharacterized conser 99.2 1.3E-09 2.7E-14 88.9 15.5 208 22-243 70-283 (339)
244 COG2706 3-carboxymuconate cycl 99.2 7.2E-07 1.6E-11 75.3 32.2 260 19-297 37-321 (346)
245 KOG0974 WD-repeat protein WDR6 99.2 9.3E-10 2E-14 103.5 16.6 190 124-349 93-288 (967)
246 KOG4190 Uncharacterized conser 99.1 1E-09 2.2E-14 96.8 13.6 300 8-345 722-1032(1034)
247 KOG4547 WD40 repeat-containing 99.1 1.5E-08 3.4E-13 90.0 20.9 189 39-244 5-220 (541)
248 PF10282 Lactonase: Lactonase, 99.1 1.2E-06 2.6E-11 77.8 33.2 244 96-348 13-274 (345)
249 TIGR02800 propeller_TolB tol-p 99.1 4.2E-08 9.1E-13 89.7 23.4 190 17-236 185-386 (417)
250 TIGR02800 propeller_TolB tol-p 99.1 1.2E-07 2.7E-12 86.6 26.4 155 73-244 188-354 (417)
251 KOG2321 WD40 repeat protein [G 99.1 3.8E-08 8.2E-13 87.3 20.0 248 73-350 50-303 (703)
252 PF04762 IKI3: IKI3 family; I 99.1 3.7E-07 8E-12 90.0 29.1 234 76-349 211-456 (928)
253 KOG0280 Uncharacterized conser 99.1 9.8E-08 2.1E-12 78.1 20.8 271 49-350 46-334 (339)
254 PF15492 Nbas_N: Neuroblastoma 99.0 9.6E-07 2.1E-11 72.4 25.9 243 80-349 3-259 (282)
255 KOG1409 Uncharacterized conser 99.0 2.5E-08 5.4E-13 83.2 16.5 248 71-351 21-272 (404)
256 KOG0309 Conserved WD40 repeat- 99.0 5.6E-09 1.2E-13 95.1 13.0 297 22-350 25-340 (1081)
257 PRK00178 tolB translocation pr 99.0 4.7E-07 1E-11 83.0 25.8 155 73-244 197-363 (430)
258 PRK04792 tolB translocation pr 99.0 8.6E-07 1.9E-11 81.4 26.3 152 73-241 216-377 (448)
259 KOG4532 WD40-like repeat conta 99.0 2.1E-07 4.6E-12 75.2 19.0 207 26-245 72-283 (344)
260 KOG2321 WD40 repeat protein [G 99.0 4.9E-07 1.1E-11 80.5 22.9 287 12-347 43-341 (703)
261 PRK00178 tolB translocation pr 98.9 8.4E-07 1.8E-11 81.4 25.3 195 17-241 194-401 (430)
262 KOG4547 WD40 repeat-containing 98.9 2.2E-07 4.8E-12 82.8 19.8 150 83-244 2-172 (541)
263 PRK01029 tolB translocation pr 98.9 6.2E-07 1.3E-11 81.7 22.8 161 75-244 185-359 (428)
264 KOG2041 WD40 repeat protein [G 98.9 1.6E-07 3.4E-12 85.7 18.0 293 20-348 13-336 (1189)
265 KOG0309 Conserved WD40 repeat- 98.9 5.6E-09 1.2E-13 95.0 8.9 213 16-244 109-339 (1081)
266 PF04762 IKI3: IKI3 family; I 98.9 8E-06 1.7E-10 80.8 31.4 244 74-348 75-378 (928)
267 PF00400 WD40: WD domain, G-be 98.9 1E-08 2.3E-13 59.4 6.5 38 12-55 2-39 (39)
268 KOG3914 WD repeat protein WDR4 98.9 6.8E-08 1.5E-12 82.2 13.8 156 77-246 65-225 (390)
269 KOG2041 WD40 repeat protein [G 98.9 8E-08 1.7E-12 87.5 14.7 243 75-341 15-280 (1189)
270 PRK01029 tolB translocation pr 98.9 1.6E-06 3.5E-11 79.0 23.4 203 21-243 184-402 (428)
271 PRK04792 tolB translocation pr 98.8 2E-06 4.3E-11 79.0 23.2 188 20-237 216-416 (448)
272 KOG3914 WD repeat protein WDR4 98.8 1.9E-07 4.2E-12 79.5 14.3 156 122-351 66-225 (390)
273 TIGR02658 TTQ_MADH_Hv methylam 98.8 8.4E-05 1.8E-09 65.1 31.1 267 49-351 27-332 (352)
274 PLN02919 haloacid dehalogenase 98.8 2.4E-05 5.3E-10 78.8 31.0 211 26-244 572-833 (1057)
275 PF00400 WD40: WD domain, G-be 98.8 3.4E-08 7.3E-13 57.2 6.4 38 109-146 2-39 (39)
276 KOG0882 Cyclophilin-related pe 98.8 1.2E-07 2.6E-12 81.9 12.3 214 20-246 8-233 (558)
277 PF15492 Nbas_N: Neuroblastoma 98.8 3.3E-05 7.1E-10 63.6 25.4 203 39-245 9-260 (282)
278 COG5170 CDC55 Serine/threonine 98.7 2.1E-07 4.5E-12 76.9 11.6 249 74-349 26-309 (460)
279 KOG2315 Predicted translation 98.7 4.4E-05 9.6E-10 68.2 25.8 280 23-349 36-390 (566)
280 KOG2315 Predicted translation 98.7 1.4E-05 3E-10 71.3 22.1 197 20-244 164-390 (566)
281 KOG2695 WD40 repeat protein [G 98.6 2.1E-07 4.5E-12 77.9 9.1 168 43-223 228-401 (425)
282 KOG4714 Nucleoporin [Nuclear s 98.6 1.3E-06 2.8E-11 70.5 13.1 160 73-244 88-254 (319)
283 KOG4714 Nucleoporin [Nuclear s 98.6 7.7E-07 1.7E-11 71.8 10.9 147 39-193 101-254 (319)
284 KOG4190 Uncharacterized conser 98.5 6E-07 1.3E-11 79.7 9.7 175 111-301 728-910 (1034)
285 COG5170 CDC55 Serine/threonine 98.5 4E-06 8.7E-11 69.4 13.8 216 20-246 25-311 (460)
286 KOG4532 WD40-like repeat conta 98.5 2.5E-05 5.4E-10 63.5 17.7 147 42-195 131-284 (344)
287 KOG2314 Translation initiation 98.5 0.00014 3.1E-09 65.1 22.9 276 26-350 215-526 (698)
288 PLN02919 haloacid dehalogenase 98.5 0.00014 3.1E-09 73.5 25.5 163 78-246 686-890 (1057)
289 KOG1920 IkappaB kinase complex 98.4 9.1E-05 2E-09 72.1 22.1 241 75-350 69-323 (1265)
290 KOG0882 Cyclophilin-related pe 98.4 6.6E-06 1.4E-10 71.4 12.9 213 117-350 8-232 (558)
291 COG5354 Uncharacterized protei 98.4 0.00051 1.1E-08 61.0 23.7 278 22-350 72-396 (561)
292 COG4946 Uncharacterized protei 98.4 0.0016 3.4E-08 57.6 29.3 142 39-194 332-478 (668)
293 KOG2314 Translation initiation 98.4 0.00024 5.3E-09 63.6 21.5 282 23-348 251-572 (698)
294 KOG2695 WD40 repeat protein [G 98.4 3.7E-06 8E-11 70.6 9.8 180 124-327 217-401 (425)
295 PRK04043 tolB translocation pr 98.3 0.00057 1.2E-08 62.2 23.8 140 76-234 189-338 (419)
296 PF07433 DUF1513: Protein of u 98.3 0.002 4.4E-08 54.7 27.2 208 26-247 9-250 (305)
297 PF11768 DUF3312: Protein of u 98.2 2.8E-05 6.2E-10 70.2 13.4 72 73-148 258-329 (545)
298 PF11768 DUF3312: Protein of u 98.2 2E-05 4.4E-10 71.1 11.8 113 77-194 208-330 (545)
299 PRK04043 tolB translocation pr 98.1 0.0016 3.4E-08 59.3 23.0 181 23-234 189-387 (419)
300 KOG1275 PAB-dependent poly(A) 98.1 9.2E-05 2E-09 70.0 14.1 147 83-242 184-340 (1118)
301 COG5354 Uncharacterized protei 98.1 0.0028 6.1E-08 56.5 22.2 195 22-244 174-395 (561)
302 KOG1008 Uncharacterized conser 98.1 4.5E-06 9.7E-11 75.6 5.1 205 75-297 57-275 (783)
303 PF08450 SGL: SMP-30/Gluconola 98.1 0.0046 1E-07 52.1 30.4 196 26-243 4-212 (246)
304 KOG2066 Vacuolar assembly/sort 98.0 0.0002 4.2E-09 67.0 15.0 189 20-244 38-233 (846)
305 KOG2114 Vacuolar assembly/sort 98.0 0.0013 2.8E-08 62.2 20.2 206 120-349 27-243 (933)
306 KOG1912 WD40 repeat protein [G 98.0 0.00093 2E-08 62.5 18.8 51 14-66 102-152 (1062)
307 KOG3617 WD40 and TPR repeat-co 97.9 0.00055 1.2E-08 64.5 16.0 107 27-148 21-131 (1416)
308 TIGR02658 TTQ_MADH_Hv methylam 97.9 0.012 2.5E-07 51.9 29.3 232 47-297 75-330 (352)
309 KOG2114 Vacuolar assembly/sort 97.9 0.0037 7.9E-08 59.3 21.2 196 81-297 30-243 (933)
310 KOG1832 HIV-1 Vpr-binding prot 97.9 1.1E-05 2.4E-10 75.8 4.3 201 11-247 1091-1294(1516)
311 KOG2066 Vacuolar assembly/sort 97.8 0.00095 2.1E-08 62.6 15.4 140 38-193 82-233 (846)
312 KOG1920 IkappaB kinase complex 97.8 0.0035 7.7E-08 61.6 19.7 201 22-244 69-322 (1265)
313 KOG3617 WD40 and TPR repeat-co 97.8 0.00079 1.7E-08 63.6 14.8 71 23-104 61-131 (1416)
314 KOG1275 PAB-dependent poly(A) 97.8 0.00088 1.9E-08 63.7 15.2 185 130-347 147-340 (1118)
315 KOG1912 WD40 repeat protein [G 97.8 0.0042 9E-08 58.3 18.4 215 12-242 46-302 (1062)
316 KOG1008 Uncharacterized conser 97.8 1.8E-05 4E-10 71.8 3.2 208 119-349 57-275 (783)
317 COG4946 Uncharacterized protei 97.7 0.0056 1.2E-07 54.2 17.7 144 19-180 357-505 (668)
318 TIGR03300 assembly_YfgL outer 97.7 0.033 7E-07 50.2 23.5 266 39-350 65-339 (377)
319 PF03178 CPSF_A: CPSF A subuni 97.7 0.033 7.1E-07 49.0 24.7 227 5-241 8-262 (321)
320 smart00320 WD40 WD40 repeats. 97.7 0.00017 3.6E-09 40.4 5.3 38 12-55 3-40 (40)
321 KOG1645 RING-finger-containing 97.6 0.005 1.1E-07 53.4 15.4 77 72-151 191-269 (463)
322 TIGR03300 assembly_YfgL outer 97.6 0.048 1E-06 49.2 26.9 261 39-346 105-376 (377)
323 smart00320 WD40 WD40 repeats. 97.6 0.00023 5E-09 39.8 5.3 36 111-146 5-40 (40)
324 KOG3621 WD40 repeat-containing 97.5 0.02 4.3E-07 53.4 18.8 107 39-149 45-155 (726)
325 KOG1645 RING-finger-containing 97.4 0.01 2.2E-07 51.5 14.0 81 112-196 187-269 (463)
326 PF06977 SdiA-regulated: SdiA- 97.3 0.079 1.7E-06 44.4 22.1 204 14-232 14-239 (248)
327 KOG4640 Anaphase-promoting com 97.3 0.0019 4.1E-08 59.1 9.5 74 75-151 21-95 (665)
328 KOG3621 WD40 repeat-containing 97.3 0.00096 2.1E-08 61.7 7.6 121 72-193 31-154 (726)
329 KOG1832 HIV-1 Vpr-binding prot 97.3 0.00033 7.2E-09 66.3 4.7 156 72-245 1099-1256(1516)
330 PF08450 SGL: SMP-30/Gluconola 97.1 0.12 2.6E-06 43.4 25.7 188 24-232 42-244 (246)
331 KOG4640 Anaphase-promoting com 97.1 0.0028 6.2E-08 58.0 9.0 74 22-107 21-95 (665)
332 PF14783 BBS2_Mid: Ciliary BBS 97.1 0.031 6.8E-07 39.9 12.4 101 217-344 2-109 (111)
333 PF07433 DUF1513: Protein of u 97.1 0.14 3.1E-06 43.8 23.6 100 78-181 8-116 (305)
334 PF06977 SdiA-regulated: SdiA- 97.0 0.17 3.7E-06 42.4 22.9 168 75-244 22-201 (248)
335 PF14783 BBS2_Mid: Ciliary BBS 96.9 0.091 2E-06 37.5 14.7 96 82-189 10-110 (111)
336 PF04053 Coatomer_WDAD: Coatom 96.9 0.36 7.8E-06 44.3 22.6 228 75-349 33-262 (443)
337 PF10647 Gmad1: Lipoprotein Lp 96.8 0.26 5.6E-06 41.7 17.6 157 76-236 25-187 (253)
338 PF04841 Vps16_N: Vps16, N-ter 96.8 0.42 9.1E-06 43.6 24.6 31 215-245 217-247 (410)
339 PF13360 PQQ_2: PQQ-like domai 96.8 0.26 5.6E-06 41.0 24.5 138 48-195 2-142 (238)
340 PRK02888 nitrous-oxide reducta 96.5 0.61 1.3E-05 44.1 18.9 119 172-298 285-405 (635)
341 PF14583 Pectate_lyase22: Olig 96.5 0.57 1.2E-05 41.6 24.1 71 40-115 49-121 (386)
342 PF08553 VID27: VID27 cytoplas 96.4 0.17 3.6E-06 49.4 15.3 134 94-243 502-646 (794)
343 PF08596 Lgl_C: Lethal giant l 96.4 0.71 1.5E-05 41.7 24.8 205 23-244 3-290 (395)
344 PF12234 Rav1p_C: RAVE protein 96.3 0.43 9.3E-06 45.4 17.2 109 80-191 35-154 (631)
345 COG3204 Uncharacterized protei 96.3 0.56 1.2E-05 39.7 19.0 169 75-244 86-263 (316)
346 KOG2079 Vacuolar assembly/sort 96.3 0.024 5.1E-07 55.5 8.8 103 86-191 99-201 (1206)
347 PF08596 Lgl_C: Lethal giant l 96.2 0.86 1.9E-05 41.2 20.0 172 12-194 77-291 (395)
348 PF15390 DUF4613: Domain of un 96.2 0.17 3.7E-06 46.7 13.5 126 19-147 54-185 (671)
349 PRK13616 lipoprotein LpqB; Pro 96.2 0.38 8.2E-06 45.9 16.5 163 75-244 350-525 (591)
350 PF08553 VID27: VID27 cytoplas 96.2 0.062 1.3E-06 52.2 11.2 102 229-348 545-646 (794)
351 PF13360 PQQ_2: PQQ-like domai 96.2 0.6 1.3E-05 38.8 22.0 182 40-245 37-231 (238)
352 PF12894 Apc4_WD40: Anaphase-p 96.2 0.018 4E-07 34.2 4.9 30 118-147 11-40 (47)
353 PRK02888 nitrous-oxide reducta 96.2 0.82 1.8E-05 43.2 17.8 75 119-194 321-405 (635)
354 PF03178 CPSF_A: CPSF A subuni 96.1 0.85 1.8E-05 40.1 29.0 155 77-244 29-202 (321)
355 KOG4441 Proteins containing BT 96.0 0.73 1.6E-05 43.9 17.1 180 85-289 284-486 (571)
356 PF12894 Apc4_WD40: Anaphase-p 95.9 0.03 6.6E-07 33.3 5.1 31 214-244 11-41 (47)
357 PF04053 Coatomer_WDAD: Coatom 95.9 0.46 9.9E-06 43.6 14.8 156 5-191 16-171 (443)
358 PF12234 Rav1p_C: RAVE protein 95.7 0.69 1.5E-05 44.0 15.5 101 41-147 43-155 (631)
359 KOG4441 Proteins containing BT 95.6 1.3 2.7E-05 42.4 17.3 179 39-236 285-486 (571)
360 PF00930 DPPIV_N: Dipeptidyl p 95.6 1.1 2.4E-05 40.0 16.2 89 96-190 23-128 (353)
361 COG0823 TolB Periplasmic compo 95.4 1.1 2.4E-05 41.0 15.6 123 50-183 219-345 (425)
362 KOG2079 Vacuolar assembly/sort 95.4 0.076 1.6E-06 52.2 8.2 99 41-147 101-202 (1206)
363 KOG2444 WD40 repeat protein [G 95.3 0.084 1.8E-06 42.7 6.9 104 86-192 70-176 (238)
364 PHA02713 hypothetical protein; 95.2 1.5 3.3E-05 41.7 16.4 146 85-243 351-532 (557)
365 PRK11138 outer membrane biogen 95.1 2.5 5.3E-05 38.4 26.0 262 40-348 121-393 (394)
366 KOG2395 Protein involved in va 95.1 0.27 5.7E-06 44.8 10.2 115 217-348 378-499 (644)
367 KOG2395 Protein involved in va 95.1 0.81 1.8E-05 41.8 13.2 141 89-244 349-500 (644)
368 PF10647 Gmad1: Lipoprotein Lp 94.9 2.1 4.5E-05 36.2 17.1 149 23-185 25-187 (253)
369 KOG2444 WD40 repeat protein [G 94.7 0.14 3E-06 41.5 6.6 103 39-148 70-177 (238)
370 COG0823 TolB Periplasmic compo 94.4 1.2 2.7E-05 40.7 13.1 111 27-149 243-359 (425)
371 PRK13616 lipoprotein LpqB; Pro 94.3 3.2 7E-05 39.8 16.1 107 74-186 447-561 (591)
372 PF14870 PSII_BNR: Photosynthe 93.9 3.9 8.5E-05 35.5 27.7 238 74-343 16-255 (302)
373 PF10313 DUF2415: Uncharacteri 93.8 0.25 5.5E-06 28.5 4.7 32 319-350 1-34 (43)
374 TIGR02604 Piru_Ver_Nterm putat 93.8 4.9 0.00011 36.1 16.0 105 76-182 15-142 (367)
375 PF14870 PSII_BNR: Photosynthe 93.7 4.2 9.2E-05 35.3 29.9 284 21-346 16-301 (302)
376 COG3490 Uncharacterized protei 93.2 4.7 0.0001 34.2 19.3 103 26-137 72-180 (366)
377 PF15390 DUF4613: Domain of un 92.7 7.2 0.00016 36.6 14.6 115 76-192 58-185 (671)
378 KOG1916 Nuclear protein, conta 92.5 0.14 3E-06 49.5 3.8 203 17-242 128-372 (1283)
379 PF04841 Vps16_N: Vps16, N-ter 92.0 9.6 0.00021 34.8 21.6 31 318-349 216-246 (410)
380 PF00930 DPPIV_N: Dipeptidyl p 91.9 8.8 0.00019 34.2 23.2 139 21-180 42-200 (353)
381 COG3386 Gluconolactonase [Carb 91.8 8.2 0.00018 33.7 22.1 230 82-340 32-277 (307)
382 PRK13684 Ycf48-like protein; P 91.4 9.7 0.00021 33.7 28.4 284 21-347 45-329 (334)
383 PF05096 Glu_cyclase_2: Glutam 91.3 8.1 0.00018 32.6 18.5 198 121-338 47-250 (264)
384 PF07995 GSDH: Glucose / Sorbo 90.9 5.2 0.00011 35.4 11.8 112 120-236 3-135 (331)
385 PRK11138 outer membrane biogen 90.8 13 0.00027 33.8 22.5 184 40-244 161-353 (394)
386 PHA02713 hypothetical protein; 90.7 5.3 0.00012 38.2 12.4 145 39-192 352-532 (557)
387 KOG2377 Uncharacterized conser 90.6 5.8 0.00012 36.0 11.4 102 73-178 65-168 (657)
388 PF07676 PD40: WD40-like Beta 90.2 1 2.2E-05 25.3 4.5 28 319-346 9-38 (39)
389 PF10313 DUF2415: Uncharacteri 89.6 1.4 3E-05 25.5 4.6 31 119-149 1-34 (43)
390 PF00780 CNH: CNH domain; Int 89.0 13 0.00029 31.6 24.3 146 85-244 6-165 (275)
391 PF08728 CRT10: CRT10; InterP 87.5 8.1 0.00018 37.6 10.9 109 39-147 114-245 (717)
392 COG3391 Uncharacterized conser 87.3 22 0.00048 32.1 23.6 187 40-245 87-284 (381)
393 KOG1897 Damage-specific DNA bi 87.2 35 0.00077 34.3 29.1 80 22-102 531-611 (1096)
394 PF05694 SBP56: 56kDa selenium 86.6 25 0.00055 32.0 20.5 121 76-196 182-345 (461)
395 PF10168 Nup88: Nuclear pore c 86.4 24 0.00052 34.8 13.7 79 164-244 85-179 (717)
396 KOG4649 PQQ (pyrrolo-quinoline 86.1 19 0.00042 30.2 23.9 119 18-144 29-161 (354)
397 KOG3630 Nuclear pore complex, 85.1 11 0.00025 38.2 10.7 148 76-232 102-261 (1405)
398 PF11715 Nup160: Nucleoporin N 84.8 7.2 0.00016 37.2 9.5 33 319-351 215-250 (547)
399 PF06433 Me-amine-dh_H: Methyl 84.2 29 0.00062 30.6 13.8 151 40-194 148-321 (342)
400 KOG3630 Nuclear pore complex, 83.7 2.4 5.3E-05 42.6 5.6 102 23-135 157-260 (1405)
401 PF10168 Nup88: Nuclear pore c 83.7 48 0.001 32.8 20.8 75 76-150 86-181 (717)
402 PF07995 GSDH: Glucose / Sorbo 83.4 31 0.00068 30.5 26.7 107 77-185 4-135 (331)
403 KOG1900 Nuclear pore complex, 83.3 12 0.00027 38.5 10.3 147 93-244 96-272 (1311)
404 KOG1916 Nuclear protein, conta 83.0 2.5 5.5E-05 41.5 5.3 141 96-243 153-322 (1283)
405 PF12657 TFIIIC_delta: Transcr 82.8 9.2 0.0002 30.1 7.8 29 120-148 87-121 (173)
406 PRK13684 Ycf48-like protein; P 82.7 34 0.00074 30.3 24.9 234 74-344 45-283 (334)
407 TIGR03606 non_repeat_PQQ dehyd 81.9 44 0.00094 31.0 16.0 57 118-175 29-90 (454)
408 PF08728 CRT10: CRT10; InterP 81.3 30 0.00064 33.9 11.7 107 85-192 113-245 (717)
409 COG3204 Uncharacterized protei 80.8 36 0.00077 29.3 19.8 166 17-192 81-262 (316)
410 KOG2377 Uncharacterized conser 80.4 47 0.001 30.5 13.5 108 214-338 66-173 (657)
411 PHA03098 kelch-like protein; P 80.0 56 0.0012 31.1 16.9 63 85-149 342-415 (534)
412 TIGR02604 Piru_Ver_Nterm putat 79.9 45 0.00098 29.9 15.8 59 76-137 73-142 (367)
413 PF07569 Hira: TUP1-like enhan 77.5 18 0.00039 29.8 8.1 63 39-102 22-93 (219)
414 PF01731 Arylesterase: Arylest 76.8 5.5 0.00012 27.2 4.1 31 320-350 55-85 (86)
415 KOG4499 Ca2+-binding protein R 76.5 43 0.00093 27.8 10.6 94 26-128 162-263 (310)
416 PF14655 RAB3GAP2_N: Rab3 GTPa 76.4 21 0.00046 32.6 8.8 32 319-351 308-339 (415)
417 PF11715 Nup160: Nucleoporin N 75.9 15 0.00032 35.1 8.3 68 84-152 156-252 (547)
418 PF14761 HPS3_N: Hermansky-Pud 75.6 43 0.00093 27.4 11.8 49 131-181 29-77 (215)
419 PHA02790 Kelch-like protein; P 75.6 72 0.0016 29.9 16.6 63 84-148 317-384 (480)
420 PF14727 PHTB1_N: PTHB1 N-term 74.9 68 0.0015 29.4 24.8 146 86-243 37-203 (418)
421 PF14655 RAB3GAP2_N: Rab3 GTPa 74.3 25 0.00054 32.1 8.7 97 219-327 6-117 (415)
422 PF07569 Hira: TUP1-like enhan 73.3 28 0.0006 28.7 8.2 72 171-245 18-96 (219)
423 PHA03098 kelch-like protein; P 71.0 97 0.0021 29.4 13.7 63 85-149 389-465 (534)
424 COG5167 VID27 Protein involved 70.9 39 0.00086 31.4 9.0 64 82-148 569-632 (776)
425 COG3391 Uncharacterized conser 70.6 83 0.0018 28.5 18.9 155 78-244 77-239 (381)
426 PF00780 CNH: CNH domain; Int 70.4 66 0.0014 27.2 16.9 144 39-194 7-166 (275)
427 COG3386 Gluconolactonase [Carb 70.2 75 0.0016 27.8 22.2 191 41-244 39-243 (307)
428 TIGR03606 non_repeat_PQQ dehyd 69.4 97 0.0021 28.8 14.3 55 76-130 31-90 (454)
429 TIGR02276 beta_rpt_yvtn 40-res 69.2 9.1 0.0002 21.4 3.4 23 328-350 1-23 (42)
430 PF02897 Peptidase_S9_N: Proly 68.1 96 0.0021 28.2 27.6 102 76-181 125-244 (414)
431 PF01436 NHL: NHL repeat; Int 66.8 16 0.00034 18.7 4.0 25 217-241 4-28 (28)
432 PF02897 Peptidase_S9_N: Proly 65.8 1.1E+02 0.0023 27.9 25.2 115 23-149 125-261 (414)
433 KOG1900 Nuclear pore complex, 65.4 1.9E+02 0.004 30.6 13.7 82 268-350 178-273 (1311)
434 KOG2247 WD40 repeat-containing 64.3 0.86 1.9E-05 41.3 -2.5 146 78-240 38-184 (615)
435 PHA02790 Kelch-like protein; P 63.0 1.4E+02 0.0029 28.1 15.6 62 85-148 271-339 (480)
436 PF14727 PHTB1_N: PTHB1 N-term 62.2 1.3E+02 0.0028 27.7 31.8 163 25-192 23-203 (418)
437 COG5308 NUP170 Nuclear pore co 62.2 1.1E+02 0.0025 30.8 10.6 86 214-301 181-279 (1263)
438 TIGR03118 PEPCTERM_chp_1 conse 62.1 1.1E+02 0.0023 26.7 12.7 115 78-193 26-170 (336)
439 PF14781 BBS2_N: Ciliary BBSom 61.6 66 0.0014 24.1 9.3 103 39-147 10-124 (136)
440 COG5167 VID27 Protein involved 61.6 25 0.00055 32.6 6.0 61 277-348 571-631 (776)
441 KOG1896 mRNA cleavage and poly 60.1 2.3E+02 0.0049 29.8 18.9 146 39-192 1046-1212(1366)
442 COG3490 Uncharacterized protei 59.5 1.2E+02 0.0025 26.2 9.7 51 39-93 125-180 (366)
443 COG4590 ABC-type uncharacteriz 57.7 1.1E+02 0.0023 28.3 9.0 156 77-244 223-386 (733)
444 KOG4460 Nuclear pore complex, 57.4 1.1E+02 0.0023 28.9 9.1 73 76-148 105-198 (741)
445 KOG4499 Ca2+-binding protein R 54.1 1.3E+02 0.0028 25.1 16.6 139 74-225 108-264 (310)
446 KOG4460 Nuclear pore complex, 53.8 2E+02 0.0043 27.2 11.8 78 271-350 106-199 (741)
447 COG4590 ABC-type uncharacteriz 50.3 33 0.00071 31.4 4.8 165 163-351 220-388 (733)
448 PF06433 Me-amine-dh_H: Methyl 50.2 1.8E+02 0.004 25.8 24.8 132 49-194 17-166 (342)
449 PLN00033 photosystem II stabil 49.7 2.1E+02 0.0045 26.2 32.4 114 214-346 280-396 (398)
450 PF12768 Rax2: Cortical protei 48.8 1.8E+02 0.0038 25.1 12.0 93 49-146 16-121 (281)
451 KOG3616 Selective LIM binding 48.7 43 0.00094 32.8 5.5 68 118-191 14-81 (1636)
452 smart00564 PQQ beta-propeller 48.1 40 0.00087 17.5 4.0 24 41-64 8-31 (33)
453 cd00216 PQQ_DH Dehydrogenases 47.3 2.5E+02 0.0054 26.4 17.1 104 48-152 174-323 (488)
454 cd00216 PQQ_DH Dehydrogenases 46.1 2.6E+02 0.0057 26.3 20.6 68 40-108 62-132 (488)
455 COG5308 NUP170 Nuclear pore co 43.4 3.8E+02 0.0082 27.4 13.8 78 165-244 183-275 (1263)
456 TIGR03075 PQQ_enz_alc_DH PQQ-d 41.9 3.2E+02 0.0069 26.1 11.9 66 40-108 70-142 (527)
457 TIGR02608 delta_60_rpt delta-6 41.7 48 0.001 20.4 3.3 19 76-94 2-20 (55)
458 KOG3616 Selective LIM binding 41.7 67 0.0014 31.6 5.6 67 75-146 15-81 (1636)
459 KOG1983 Tomosyn and related SN 41.3 4.4E+02 0.0096 27.6 13.1 28 76-103 37-64 (993)
460 COG5290 IkappaB kinase complex 39.0 62 0.0013 32.0 5.0 91 80-176 252-349 (1243)
461 PF12341 DUF3639: Protein of u 38.4 59 0.0013 16.7 3.7 26 22-55 2-27 (27)
462 PLN00033 photosystem II stabil 36.6 3.4E+02 0.0073 24.9 27.0 112 217-345 241-352 (398)
463 PF12768 Rax2: Cortical protei 36.1 2.9E+02 0.0062 23.9 11.8 52 96-149 16-73 (281)
464 PF08801 Nucleoporin_N: Nup133 35.4 3.5E+02 0.0077 24.7 15.0 30 215-244 190-219 (422)
465 COG5290 IkappaB kinase complex 33.4 5.2E+02 0.011 26.1 15.0 31 117-147 111-141 (1243)
466 KOG1897 Damage-specific DNA bi 32.8 5.8E+02 0.013 26.4 24.6 75 118-192 530-612 (1096)
467 KOG2247 WD40 repeat-containing 32.1 10 0.00022 34.9 -1.1 143 121-289 37-180 (615)
468 PF01011 PQQ: PQQ enzyme repea 31.8 94 0.002 17.0 4.1 25 42-66 3-27 (38)
469 PF05694 SBP56: 56kDa selenium 31.4 4.3E+02 0.0093 24.5 26.2 33 319-351 312-344 (461)
470 PF12657 TFIIIC_delta: Transcr 31.0 2E+02 0.0044 22.5 6.2 36 23-58 87-122 (173)
471 PF14781 BBS2_N: Ciliary BBSom 30.7 2.3E+02 0.0051 21.3 10.9 69 80-150 4-83 (136)
472 PRK13615 lipoprotein LpqB; Pro 29.4 5.3E+02 0.011 24.9 16.9 158 78-243 337-501 (557)
473 KOG1896 mRNA cleavage and poly 28.3 7.5E+02 0.016 26.4 12.4 117 19-149 1095-1214(1366)
474 PF07250 Glyoxal_oxid_N: Glyox 26.5 3.9E+02 0.0085 22.5 11.5 138 99-243 49-196 (243)
475 PF14269 Arylsulfotran_2: Aryl 26.0 4.3E+02 0.0093 23.0 7.9 69 77-147 146-219 (299)
476 PF03088 Str_synth: Strictosid 25.4 2.3E+02 0.005 19.5 5.6 42 45-92 33-74 (89)
477 TIGR03118 PEPCTERM_chp_1 conse 25.4 4.7E+02 0.01 23.0 20.3 204 23-244 24-279 (336)
478 KOG2280 Vacuolar assembly/sort 25.2 7E+02 0.015 25.0 13.6 172 50-247 65-249 (829)
479 PF05096 Glu_cyclase_2: Glutam 24.3 4.5E+02 0.0098 22.5 21.3 123 12-151 34-160 (264)
480 PF06739 SBBP: Beta-propeller 24.0 1.4E+02 0.0031 16.5 3.4 22 215-236 13-34 (38)
481 smart00135 LY Low-density lipo 23.5 1.4E+02 0.003 16.2 3.7 30 320-349 10-39 (43)
482 KOG3611 Semaphorins [Signal tr 23.2 7.8E+02 0.017 24.8 9.9 69 119-189 408-489 (737)
483 PF14761 HPS3_N: Hermansky-Pud 23.0 4.3E+02 0.0094 21.7 13.7 49 87-136 29-77 (215)
484 PF10584 Proteasome_A_N: Prote 22.3 33 0.00071 16.9 0.2 7 82-88 8-14 (23)
485 PRK14131 N-acetylneuraminic ac 22.0 5.8E+02 0.013 22.9 18.2 26 85-110 84-120 (376)
486 KOG4649 PQQ (pyrrolo-quinoline 21.8 5.1E+02 0.011 22.2 25.6 136 40-188 24-160 (354)
487 PRK10526 acyl-CoA thioesterase 20.0 5.3E+02 0.011 22.2 7.2 62 178-241 224-285 (286)
No 1
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=2.2e-56 Score=352.05 Aligned_cols=308 Identities=58% Similarity=1.082 Sum_probs=272.4
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+..++.++||+++|+.++|+|.. +..|||||.|+.||+|+...+ .-+.++..+...|++.|++++|+|.|++|+
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~-----g~ilAscg~Dk~vriw~~~~~-~s~~ck~vld~~hkrsVRsvAwsp~g~~La 77 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGK-----GVILASCGTDKAVRIWSTSSG-DSWTCKTVLDDGHKRSVRSVAWSPHGRYLA 77 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCC-----ceEEEeecCCceEEEEecCCC-CcEEEEEeccccchheeeeeeecCCCcEEE
Confidence 56788999999999999999953 358999999999999998753 337788777788999999999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+|++|.++.||....++++++.+++||..+|.|++|+++|++||+|++|++|.+|.+..+..+++...++.|.+.|..+.
T Consensus 78 ~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~ 157 (312)
T KOG0645|consen 78 SASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVI 157 (312)
T ss_pred EeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEE
Confidence 99999999999988899999999999999999999999999999999999999999998889999999999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
|||+..+|+++|.|++|++|+-.+ .+.|.+.+++. +|...|++++|+|.|..|++++.|++++||...
T Consensus 158 WHPt~dlL~S~SYDnTIk~~~~~~--dddW~c~~tl~----g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~------ 225 (312)
T KOG0645|consen 158 WHPTEDLLFSCSYDNTIKVYRDED--DDDWECVQTLD----GHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY------ 225 (312)
T ss_pred EcCCcceeEEeccCCeEEEEeecC--CCCeeEEEEec----CccceEEEEEecCCCceEEEecCCcceEeeeec------
Confidence 999999999999999999997653 45688888775 788899999999999999999999999999532
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCC
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~ 330 (352)
+.+...|...++.++|. ++.+++++.|+.+++|.... -.+.+....+..+...|...|+++.|+|..
T Consensus 226 ----------~~~~~~~sr~~Y~v~W~-~~~IaS~ggD~~i~lf~~s~--~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~ 292 (312)
T KOG0645|consen 226 ----------TDLSGMHSRALYDVPWD-NGVIASGGGDDAIRLFKESD--SPDEPSWNLLAKKEGAHEVDVNSVQWNPKV 292 (312)
T ss_pred ----------cCcchhcccceEeeeec-ccceEeccCCCEEEEEEecC--CCCCchHHHHHhhhcccccccceEEEcCCC
Confidence 22334567789999998 88999999999999997652 233455555556678899999999999965
Q ss_pred cceEEEecCCCeEEEEeec
Q 018675 331 RRLLASASDDGMIKIWELA 349 (352)
Q Consensus 331 ~~~l~s~~~Dg~i~iw~~~ 349 (352)
+..|++||.||.+++|++.
T Consensus 293 ~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 293 SNRLASGGDDGIVNFWELE 311 (312)
T ss_pred CCceeecCCCceEEEEEec
Confidence 6678999999999999985
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4e-48 Score=318.69 Aligned_cols=294 Identities=32% Similarity=0.586 Sum_probs=240.6
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
++..++.||.+.|-|+.|+|+ +..|+|||.|.++|+||+.+.....++ +.|..-|.|++|+|||+.||+
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~------g~~l~tGsGD~TvR~WD~~TeTp~~t~-----KgH~~WVlcvawsPDgk~iAS 174 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPT------GSRLVTGSGDTTVRLWDLDTETPLFTC-----KGHKNWVLCVAWSPDGKKIAS 174 (480)
T ss_pred eeccccCCCCCcEEEEEecCC------CceEEecCCCceEEeeccCCCCcceee-----cCCccEEEEEEECCCcchhhc
Confidence 344568899999999999996 579999999999999999987654444 458999999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-----CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-----SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-----~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
|+.||+|++||..+++. ....+.+|...|++++|.| .+.+|++++.||+++|||+..+ .++..+.+|+.+|
T Consensus 175 G~~dg~I~lwdpktg~~-~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~---~~~~~lsgHT~~V 250 (480)
T KOG0271|consen 175 GSKDGSIRLWDPKTGQQ-IGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLG---TCVRTLSGHTASV 250 (480)
T ss_pred cccCCeEEEecCCCCCc-ccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCc---eEEEEeccCccce
Confidence 99999999999877653 3557899999999999965 5678999999999999998644 4678889999999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc-----------CCCC--------
Q 018675 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN-----------AKGD-------- 227 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~-----------~~~~-------- 227 (352)
+|+.|--+ .+++++|.|++|++|+..+. .+. ....||...|+.|+++ |.++
T Consensus 251 TCvrwGG~-gliySgS~DrtIkvw~a~dG-----~~~----r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~ 320 (480)
T KOG0271|consen 251 TCVRWGGE-GLIYSGSQDRTIKVWRALDG-----KLC----RELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEE 320 (480)
T ss_pred EEEEEcCC-ceEEecCCCceEEEEEccch-----hHH----HhhcccchheeeeeccchhhhhccccccccccCCChHHH
Confidence 99999754 47899999999999975542 122 2345899999998866 3343
Q ss_pred -----------------EEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCC
Q 018675 228 -----------------KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADD 289 (352)
Q Consensus 228 -----------------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~ 289 (352)
.|++|++|.++.+|+-... -+++..+. .|.+-+..+.|+|++ ++|+++.|+
T Consensus 321 ~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~----------kkpi~rmt-gHq~lVn~V~fSPd~r~IASaSFDk 389 (480)
T KOG0271|consen 321 QKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKS----------KKPITRMT-GHQALVNHVSFSPDGRYIASASFDK 389 (480)
T ss_pred HHHHHHHHHHhhccCcceeEEecCCceEEEeccccc----------ccchhhhh-chhhheeeEEECCCccEEEEeeccc
Confidence 4999999999999964211 11222222 377789999999987 899999999
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.|++|+...+ ..+..+.||-+.|+.++|+.|.+ +|+|||.|.++++|++.++
T Consensus 390 SVkLW~g~tG---------k~lasfRGHv~~VYqvawsaDsR-LlVS~SkDsTLKvw~V~tk 441 (480)
T KOG0271|consen 390 SVKLWDGRTG---------KFLASFRGHVAAVYQVAWSADSR-LLVSGSKDSTLKVWDVRTK 441 (480)
T ss_pred ceeeeeCCCc---------chhhhhhhccceeEEEEeccCcc-EEEEcCCCceEEEEEeeee
Confidence 9999965443 23456789999999999999875 8999999999999999764
No 3
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-44 Score=298.16 Aligned_cols=290 Identities=28% Similarity=0.540 Sum_probs=237.8
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-----CC
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-----SG 86 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-----~~ 86 (352)
.+..+.+||...|.|++|+|+ ++.+|||+.||+|++||..+++.... .+ ..|.+.|++++|.| ..
T Consensus 148 Tp~~t~KgH~~WVlcvawsPD------gk~iASG~~dg~I~lwdpktg~~~g~---~l-~gH~K~It~Lawep~hl~p~~ 217 (480)
T KOG0271|consen 148 TPLFTCKGHKNWVLCVAWSPD------GKKIASGSKDGSIRLWDPKTGQQIGR---AL-RGHKKWITALAWEPLHLVPPC 217 (480)
T ss_pred CcceeecCCccEEEEEEECCC------cchhhccccCCeEEEecCCCCCcccc---cc-cCcccceeEEeecccccCCCc
Confidence 445678999999999999998 68999999999999999988765332 12 45999999999976 56
Q ss_pred CEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 87 KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 87 ~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
++||+++.||+++|||...+ .++..+.+|+.+|+|++|-.+ .+++++|.|++|++|+...+ .+++.+++|...|
T Consensus 218 r~las~skDg~vrIWd~~~~--~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG---~~~r~lkGHahwv 291 (480)
T KOG0271|consen 218 RRLASSSKDGSVRIWDTKLG--TCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDG---KLCRELKGHAHWV 291 (480)
T ss_pred cceecccCCCCEEEEEccCc--eEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccch---hHHHhhcccchhe
Confidence 89999999999999997655 467788999999999999765 48999999999999998664 3567788999999
Q ss_pred eEEEEc-----------CCCC-------------------------EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccC
Q 018675 167 KMVQWH-----------PTMD-------------------------VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210 (352)
Q Consensus 167 ~~~~~~-----------~~~~-------------------------~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 210 (352)
+.++.+ |.+. .|++|+.|.++.+|+..... +++ ...
T Consensus 292 N~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k----kpi----~rm 363 (480)
T KOG0271|consen 292 NHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK----KPI----TRM 363 (480)
T ss_pred eeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc----cch----hhh
Confidence 888755 3333 49999999999999643221 111 234
Q ss_pred CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCC
Q 018675 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADD 289 (352)
Q Consensus 211 ~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~ 289 (352)
.+|+.-|+.+.|+||++++|+++-|..||+|+.+..++ +.++- .|...++.++|+.+. .+++|+.|.
T Consensus 364 tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~-----------lasfR-GHv~~VYqvawsaDsRLlVS~SkDs 431 (480)
T KOG0271|consen 364 TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKF-----------LASFR-GHVAAVYQVAWSADSRLLVSGSKDS 431 (480)
T ss_pred hchhhheeeEEECCCccEEEEeecccceeeeeCCCcch-----------hhhhh-hccceeEEEEeccCccEEEEcCCCc
Confidence 58999999999999999999999999999998765432 12222 367789999999875 788999999
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
++++|+.... .+...+.||..+|.++.|+|||++ +++|+.|+.+++|.
T Consensus 432 TLKvw~V~tk---------Kl~~DLpGh~DEVf~vDwspDG~r-V~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 432 TLKVWDVRTK---------KLKQDLPGHADEVFAVDWSPDGQR-VASGGKDKVLRLWR 479 (480)
T ss_pred eEEEEEeeee---------eecccCCCCCceEEEEEecCCCce-eecCCCceEEEeec
Confidence 9999976542 344567899999999999999975 78999999999995
No 4
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=7.1e-43 Score=278.49 Aligned_cols=294 Identities=24% Similarity=0.435 Sum_probs=240.3
Q ss_pred cceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCE
Q 018675 9 YELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 9 ~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 88 (352)
++++...+|+||...|+++.|+++ ..+++|+|+||.+.|||.-+..+..- + ..-..-|.+|+|+|+|++
T Consensus 43 i~~~~rr~LkGH~~Ki~~~~ws~D------sr~ivSaSqDGklIvWDs~TtnK~ha----i-pl~s~WVMtCA~sPSg~~ 111 (343)
T KOG0286|consen 43 IQMRTRRTLKGHLNKIYAMDWSTD------SRRIVSASQDGKLIVWDSFTTNKVHA----I-PLPSSWVMTCAYSPSGNF 111 (343)
T ss_pred eeeeeEEEecccccceeeeEecCC------cCeEEeeccCCeEEEEEcccccceeE----E-ecCceeEEEEEECCCCCe
Confidence 344556889999999999999998 47999999999999999876543211 1 223467999999999999
Q ss_pred EEEEeCCCcEEEEEccCC----ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 89 LATASFDATTCIWEDVGG----DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
+|.|+.|+...||+..+. .......+.+|.+-+.|+.|-+ ..+|+|+|.|.+..+||+..+. .+..+.+|..
T Consensus 112 VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~---~~~~f~GH~g 187 (343)
T KOG0286|consen 112 VACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQ---QTQVFHGHTG 187 (343)
T ss_pred EEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccce---EEEEecCCcc
Confidence 999999999999987633 2233456789999999999977 4678899999999999997664 4567889999
Q ss_pred CeeEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 165 DVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 165 ~v~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
.|.+++++| +++.+++|+-|+..++||++.. .+.+++. +|+..|++|+|+|+|.-+++|++|++.|+||+
T Consensus 188 DV~slsl~p~~~ntFvSg~cD~~aklWD~R~~-----~c~qtF~----ghesDINsv~ffP~G~afatGSDD~tcRlyDl 258 (343)
T KOG0286|consen 188 DVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG-----QCVQTFE----GHESDINSVRFFPSGDAFATGSDDATCRLYDL 258 (343)
T ss_pred cEEEEecCCCCCCeEEecccccceeeeeccCc-----ceeEeec----ccccccceEEEccCCCeeeecCCCceeEEEee
Confidence 999999999 8999999999999999988764 4566554 89999999999999999999999999999998
Q ss_pred CccccccCCCCccceeeEEeec-ccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcce
Q 018675 244 DITRMQSGDGYASWRHLCTISG-YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV 321 (352)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 321 (352)
+..+ ++..++. .....+.+++|+.+| ++.+|..|.++.+|+.-+. +....+.+|..+|
T Consensus 259 RaD~-----------~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~---------e~vg~L~GHeNRv 318 (343)
T KOG0286|consen 259 RADQ-----------ELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKG---------ERVGVLAGHENRV 318 (343)
T ss_pred cCCc-----------EEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeecccc---------ceEEEeeccCCee
Confidence 7432 1222221 123468899999987 5677788999999975432 2344567999999
Q ss_pred eEEEecCCCcceEEEecCCCeEEEEe
Q 018675 322 NSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 322 ~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
.++..+|||. .++|||.|.++|||.
T Consensus 319 Scl~~s~DG~-av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 319 SCLGVSPDGM-AVATGSWDSTLRIWA 343 (343)
T ss_pred EEEEECCCCc-EEEecchhHheeecC
Confidence 9999999996 689999999999994
No 5
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=275.57 Aligned_cols=305 Identities=24% Similarity=0.375 Sum_probs=240.6
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceee-eeeeeeecceecceEEEEECCCCCEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW-NCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
+....+|+||++.|+.++..+.. .+.+++++.|+++.+|++......+ .+...+ +.|...|..+..++||++.
T Consensus 5 l~l~~tl~gh~d~Vt~la~~~~~-----~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~-~GHsH~v~dv~~s~dg~~a 78 (315)
T KOG0279|consen 5 LVLRGTLEGHTDWVTALAIKIKN-----SDILVSASRDKTIIVWKLTSDDIKYGVPVRRL-TGHSHFVSDVVLSSDGNFA 78 (315)
T ss_pred heeeeeecCCCceEEEEEeecCC-----CceEEEcccceEEEEEEeccCccccCceeeee-eccceEecceEEccCCceE
Confidence 35567899999999999998863 5789999999999999987553222 222223 4599999999999999999
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec--CccCee
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG--HAQDVK 167 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--h~~~v~ 167 (352)
++++.|+++++||..++ +....+.+|...|.+++|+++..++++|+.|++|++|+..... ..+... +..-|.
T Consensus 79 lS~swD~~lrlWDl~~g--~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~c----k~t~~~~~~~~WVs 152 (315)
T KOG0279|consen 79 LSASWDGTLRLWDLATG--ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC----KYTIHEDSHREWVS 152 (315)
T ss_pred EeccccceEEEEEecCC--cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccE----EEEEecCCCcCcEE
Confidence 99999999999999887 4566778999999999999999999999999999999986432 223332 267799
Q ss_pred EEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 168 MVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 168 ~~~~~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
|+.|+|+ ..++++++.|+++++||+..-+ +.....||...++.++++|||.+.++|+.||.+.+||++.
T Consensus 153 cvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~---------l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~ 223 (315)
T KOG0279|consen 153 CVRFSPNESNPIIVSASWDKTVKVWNLRNCQ---------LRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE 223 (315)
T ss_pred EEEEcCCCCCcEEEEccCCceEEEEccCCcc---------hhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccC
Confidence 9999998 6789999999999999775421 2233458999999999999999999999999999999864
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEE
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 325 (352)
.+ .+. .-.+...|.+++|+|+.+.+++..+..|++|+...+...........-.....-.-....++
T Consensus 224 ~k-----------~ly--sl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clsla 290 (315)
T KOG0279|consen 224 GK-----------NLY--SLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLA 290 (315)
T ss_pred Cc-----------eeE--eccCCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEE
Confidence 32 112 22356789999999999999999999999998766544443332222111222344577889
Q ss_pred ecCCCcceEEEecCCCeEEEEeecc
Q 018675 326 WSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 326 ~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|++||..+ .+|-.|+.|++|++..
T Consensus 291 ws~dG~tL-f~g~td~~irv~qv~~ 314 (315)
T KOG0279|consen 291 WSADGQTL-FAGYTDNVIRVWQVAK 314 (315)
T ss_pred EcCCCcEE-EeeecCCcEEEEEeec
Confidence 99999864 5799999999999874
No 6
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.7e-43 Score=293.56 Aligned_cols=284 Identities=25% Similarity=0.394 Sum_probs=239.6
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CCEEEEEeC
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GKLLATASF 94 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~ 94 (352)
-.|-+.+|..+.|+++ +++|+|||.+|.++||+...... ...+ ..|...|.++.|+|. +.-+|||+.
T Consensus 171 Q~gd~rPis~~~fS~d------s~~laT~swsG~~kvW~~~~~~~----~~~l-~gH~~~v~~~~fhP~~~~~~lat~s~ 239 (459)
T KOG0272|consen 171 QVGDTRPISGCSFSRD------SKHLATGSWSGLVKVWSVPQCNL----LQTL-RGHTSRVGAAVFHPVDSDLNLATASA 239 (459)
T ss_pred hccCCCcceeeEeecC------CCeEEEeecCCceeEeecCCcce----eEEE-eccccceeeEEEccCCCccceeeecc
Confidence 3467889999999987 47999999999999999876532 2222 569999999999997 568999999
Q ss_pred CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
||++++|+..+. .++..+.+|...|..++|+|+|++|+|++.|.+-++||+..... +....||...|.+++|+|+
T Consensus 240 Dgtvklw~~~~e--~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~E---lL~QEGHs~~v~~iaf~~D 314 (459)
T KOG0272|consen 240 DGTVKLWKLSQE--TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSE---LLLQEGHSKGVFSIAFQPD 314 (459)
T ss_pred CCceeeeccCCC--cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchh---hHhhcccccccceeEecCC
Confidence 999999987654 56788999999999999999999999999999999999976542 3446799999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCC
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGY 254 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 254 (352)
|.++++|+.|..-+|||++.. .++..+ .+|..+|.+|+|+|+|..|||||.|+++||||++..+.
T Consensus 315 GSL~~tGGlD~~~RvWDlRtg-----r~im~L----~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~------ 379 (459)
T KOG0272|consen 315 GSLAATGGLDSLGRVWDLRTG-----RCIMFL----AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE------ 379 (459)
T ss_pred CceeeccCccchhheeecccC-----cEEEEe----cccccceeeEeECCCceEEeecCCCCcEEEeeeccccc------
Confidence 999999999999999987654 355544 37999999999999999999999999999999875432
Q ss_pred ccceeeEEeecccCcceEEEEecC--CceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcc
Q 018675 255 ASWRHLCTISGYHDRTIFSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR 332 (352)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~ 332 (352)
..+ .+.|.+-|..+.+.| +.++++++.|+++++|..... .+++.+.||.+.|.+++.+|++.
T Consensus 380 -----ly~-ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~---------~~~ksLaGHe~kV~s~Dis~d~~- 443 (459)
T KOG0272|consen 380 -----LYT-IPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW---------SPLKSLAGHEGKVISLDISPDSQ- 443 (459)
T ss_pred -----cee-cccccchhhheEecccCCeEEEEcccCcceeeecCCCc---------ccchhhcCCccceEEEEeccCCc-
Confidence 222 235778888899997 348999999999999965432 34567889999999999999986
Q ss_pred eEEEecCCCeEEEEe
Q 018675 333 LLASASDDGMIKIWE 347 (352)
Q Consensus 333 ~l~s~~~Dg~i~iw~ 347 (352)
.++|+|.|.++|+|.
T Consensus 444 ~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 444 AIATSSFDRTIKLWR 458 (459)
T ss_pred eEEEeccCceeeecc
Confidence 688999999999995
No 7
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.4e-40 Score=277.38 Aligned_cols=248 Identities=33% Similarity=0.534 Sum_probs=212.6
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+++|.||+..|.++.|+|.+. ...+|||+.||++++|+.+....+ ..+ ..|...|..++|+|+|++|+|
T Consensus 208 ~~~~~l~gH~~~v~~~~fhP~~~----~~~lat~s~Dgtvklw~~~~e~~l----~~l-~gH~~RVs~VafHPsG~~L~T 278 (459)
T KOG0272|consen 208 NLLQTLRGHTSRVGAAVFHPVDS----DLNLATASADGTVKLWKLSQETPL----QDL-EGHLARVSRVAFHPSGKFLGT 278 (459)
T ss_pred ceeEEEeccccceeeEEEccCCC----ccceeeeccCCceeeeccCCCcch----hhh-hcchhhheeeeecCCCceeee
Confidence 56788999999999999999742 357999999999999998765322 222 458899999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
++.|.+-++||..++. .+....||...|.+++|.|+|.+++|||-|..-+|||++.++ ++..+.+|..+|..++|
T Consensus 279 asfD~tWRlWD~~tk~--ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr---~im~L~gH~k~I~~V~f 353 (459)
T KOG0272|consen 279 ASFDSTWRLWDLETKS--ELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGR---CIMFLAGHIKEILSVAF 353 (459)
T ss_pred cccccchhhcccccch--hhHhhcccccccceeEecCCCceeeccCccchhheeecccCc---EEEEecccccceeeEeE
Confidence 9999999999998764 344568999999999999999999999999999999998775 57778999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC-CCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
+|+|..+++||.|++++|||++.... +.++ .+|.+-|..|.|+| .|.+|+|++.|++++||..+
T Consensus 354 sPNGy~lATgs~Dnt~kVWDLR~r~~-----ly~i----pAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~------ 418 (459)
T KOG0272|consen 354 SPNGYHLATGSSDNTCKVWDLRMRSE-----LYTI----PAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTR------ 418 (459)
T ss_pred CCCceEEeecCCCCcEEEeeeccccc-----ceec----ccccchhhheEecccCCeEEEEcccCcceeeecCC------
Confidence 99999999999999999999875432 2333 48999999999999 68999999999999999753
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEE
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~ 294 (352)
.|..+..+. .|+..|.+++.++++ .+++++.|.++++|
T Consensus 419 -----~~~~~ksLa-GHe~kV~s~Dis~d~~~i~t~s~DRT~KLW 457 (459)
T KOG0272|consen 419 -----TWSPLKSLA-GHEGKVISLDISPDSQAIATSSFDRTIKLW 457 (459)
T ss_pred -----Ccccchhhc-CCccceEEEEeccCCceEEEeccCceeeec
Confidence 444444444 488899999999987 78999999999999
No 8
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=2e-37 Score=265.03 Aligned_cols=307 Identities=24% Similarity=0.416 Sum_probs=234.5
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+.++.||+..|++++|.|.+ +-+++|||.|++|.+|+-.. . +++... ..|.+.|+|+.|+|||.++|+++
T Consensus 140 vGei~GhSr~ins~~~KpsR-----PfRi~T~sdDn~v~ffeGPP-F---KFk~s~-r~HskFV~~VRysPDG~~Fat~g 209 (603)
T KOG0318|consen 140 VGEITGHSRRINSVDFKPSR-----PFRIATGSDDNTVAFFEGPP-F---KFKSSF-REHSKFVNCVRYSPDGSRFATAG 209 (603)
T ss_pred cceeeccceeEeeeeccCCC-----ceEEEeccCCCeEEEeeCCC-e---eeeecc-cccccceeeEEECCCCCeEEEec
Confidence 45678999999999999986 35799999999999997432 2 333333 45889999999999999999999
Q ss_pred CCCcEEEEEccCCceeeeEeec---cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe--------------eE--
Q 018675 94 FDATTCIWEDVGGDYECVATLE---GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE--------------FE-- 154 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~--------------~~-- 154 (352)
.||++.+||-.+++. +..+. +|.+.|.+++|+||+.+|+|+|.|.++++||+..... ..
T Consensus 210 sDgki~iyDGktge~--vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~l 287 (603)
T KOG0318|consen 210 SDGKIYIYDGKTGEK--VGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCL 287 (603)
T ss_pred CCccEEEEcCCCccE--EEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEE
Confidence 999999999887754 45554 8999999999999999999999999999999753210 00
Q ss_pred ------------------------EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce------eE-
Q 018675 155 ------------------------CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH------CV- 203 (352)
Q Consensus 155 ------------------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~------~~- 203 (352)
+...+.+|...|+++..+|++.++++|+.||.|.-|+.......... .+
T Consensus 288 Wqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~ 367 (603)
T KOG0318|consen 288 WQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIK 367 (603)
T ss_pred EeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEE
Confidence 23346789999999999999999999999999999987543222110 00
Q ss_pred -------------------eeeec---------------c-------CC------------------------CCcccEE
Q 018675 204 -------------------QTISE---------------S-------NN------------------------GHSSTIW 218 (352)
Q Consensus 204 -------------------~~~~~---------------~-------~~------------------------~h~~~i~ 218 (352)
..+.. + .+ .-.....
T Consensus 368 ~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s 447 (603)
T KOG0318|consen 368 GMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESS 447 (603)
T ss_pred EEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccc
Confidence 00000 0 00 0122344
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEcc
Q 018675 219 ALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES 297 (352)
Q Consensus 219 ~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~ 297 (352)
+++++|++.+++.|+.||.|++|.+....+.. .. ....|...+..++++|++ +++++...+.+.+|+..
T Consensus 448 ~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~e---------e~-~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~ 517 (603)
T KOG0318|consen 448 AVAVSPDGSEVAVGGQDGKVHVYSLSGDELKE---------EA-KLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVA 517 (603)
T ss_pred eEEEcCCCCEEEEecccceEEEEEecCCcccc---------ee-eeecccCCceEEEECCCCcEEEEeccCCcEEEEEcc
Confidence 67899999999999999999999875322211 11 112367889999999987 89999999999999765
Q ss_pred CCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 298 KDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.... ......-|...|++++|+|++. ++||||.|-.|.||++.++
T Consensus 518 s~~~--------~~~~w~FHtakI~~~aWsP~n~-~vATGSlDt~Viiysv~kP 562 (603)
T KOG0318|consen 518 SREV--------KTNRWAFHTAKINCVAWSPNNK-LVATGSLDTNVIIYSVKKP 562 (603)
T ss_pred cCce--------ecceeeeeeeeEEEEEeCCCce-EEEeccccceEEEEEccCh
Confidence 4322 1223345999999999999985 8999999999999999875
No 9
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=2.8e-38 Score=262.62 Aligned_cols=282 Identities=26% Similarity=0.489 Sum_probs=228.9
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
+-.|+.+.|.|+ +..|+||++.|.+.||+.... .. ..+...|..+|+++.|+++|..+++|..+|.|++
T Consensus 96 kc~V~~v~WtPe------GRRLltgs~SGEFtLWNg~~f----nF-EtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKy 164 (464)
T KOG0284|consen 96 KCPVNVVRWTPE------GRRLLTGSQSGEFTLWNGTSF----NF-ETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKY 164 (464)
T ss_pred ccceeeEEEcCC------CceeEeecccccEEEecCcee----eH-HHHhhhhcccceeEEEccCCCEEEEcCCCceEEe
Confidence 347899999997 578999999999999987431 11 2334679999999999999999999999999999
Q ss_pred EEccCCceeeeEeecccc-CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 101 WEDVGGDYECVATLEGHE-NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
|+..-. -+..+++|. ..|++++|+|+...|++||+|++|+|||..... ....+.+|.-.|++++|||+...++
T Consensus 165 Wqpnmn---nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k---ee~vL~GHgwdVksvdWHP~kgLia 238 (464)
T KOG0284|consen 165 WQPNMN---NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK---EERVLRGHGWDVKSVDWHPTKGLIA 238 (464)
T ss_pred cccchh---hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc---hhheeccCCCCcceeccCCccceeE
Confidence 975432 233445555 899999999999999999999999999986543 2345689999999999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc-cccccCCCCccce
Q 018675 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWR 258 (352)
Q Consensus 180 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~ 258 (352)
+||.|+.|++||... ..|+.++. +|.+.|.++.|+|++++|+++|.|..++++|++. .++...
T Consensus 239 sgskDnlVKlWDprS-----g~cl~tlh----~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~------- 302 (464)
T KOG0284|consen 239 SGSKDNLVKLWDPRS-----GSCLATLH----GHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTY------- 302 (464)
T ss_pred EccCCceeEeecCCC-----cchhhhhh----hccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHh-------
Confidence 999999999996544 34555553 7999999999999999999999999999999873 222211
Q ss_pred eeEEeecccCcceEEEEecC--CceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEE
Q 018675 259 HLCTISGYHDRTIFSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS 336 (352)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~~~--~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s 336 (352)
-.|...+.++.|.| .+++.+|+.||.+..|..... ..+.....+|...|.+++|+|-|. +|+|
T Consensus 303 ------r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~--------~p~~~i~~AHd~~iwsl~~hPlGh-il~t 367 (464)
T KOG0284|consen 303 ------RGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLE--------EPLGEIPPAHDGEIWSLAYHPLGH-ILAT 367 (464)
T ss_pred ------hcchhhheeeccccccccceeeccCCCceEEEecccc--------ccccCCCcccccceeeeeccccce-eEee
Confidence 12566788888888 468999999999999976411 122234578999999999999985 8999
Q ss_pred ecCCCeEEEEeecc
Q 018675 337 ASDDGMIKIWELAN 350 (352)
Q Consensus 337 ~~~Dg~i~iw~~~~ 350 (352)
|+.|.++|.|.-.+
T Consensus 368 gsnd~t~rfw~r~r 381 (464)
T KOG0284|consen 368 GSNDRTVRFWTRNR 381 (464)
T ss_pred cCCCcceeeeccCC
Confidence 99999999997544
No 10
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.5e-36 Score=236.05 Aligned_cols=278 Identities=21% Similarity=0.344 Sum_probs=219.5
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN 119 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~ 119 (352)
-+|+|+|.|.+||+|...++. |...+. .....|+.+.++|+++.||+++. ..|++||..++...++.++.+|+.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~----C~rTiq-h~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~k 84 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGI----CSRTIQ-HPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTK 84 (311)
T ss_pred eEEEeccCcceeeeeehhcCe----EEEEEe-cCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCC
Confidence 479999999999999998874 333332 13478999999999999998764 679999998887778999999999
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN 199 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 199 (352)
.|+++.|..+|..++|||+||+++|||++.- .+ .....|..+|+++..+|+...|+++..+|.|++||+....
T Consensus 85 NVtaVgF~~dgrWMyTgseDgt~kIWdlR~~---~~-qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~--- 157 (311)
T KOG0315|consen 85 NVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL---SC-QRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENS--- 157 (311)
T ss_pred ceEEEEEeecCeEEEecCCCceEEEEeccCc---cc-chhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCc---
Confidence 9999999999999999999999999999752 22 2334577899999999999999999999999999986531
Q ss_pred ceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC
Q 018675 200 WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE 279 (352)
Q Consensus 200 ~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 279 (352)
+...+.. .-...|.++...|+|.+|+.+..-|+..+|++-.... .....+..++. .|..-+....++|+
T Consensus 158 --c~~~liP---e~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~-----~s~l~P~~k~~-ah~~~il~C~lSPd 226 (311)
T KOG0315|consen 158 --CTHELIP---EDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQT-----ASELEPVHKFQ-AHNGHILRCLLSPD 226 (311)
T ss_pred --cccccCC---CCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCc-----cccceEhhhee-cccceEEEEEECCC
Confidence 2222211 1236899999999999999999999999998643111 11222333343 35666777788887
Q ss_pred c-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 280 G-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 280 ~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+ +|+++++|.++++|....- + +.-....+|+..+.+++||.|++ +|+||+.|+++|+|+++.
T Consensus 227 ~k~lat~ssdktv~iwn~~~~--~------kle~~l~gh~rWvWdc~FS~dg~-YlvTassd~~~rlW~~~~ 289 (311)
T KOG0315|consen 227 VKYLATCSSDKTVKIWNTDDF--F------KLELVLTGHQRWVWDCAFSADGE-YLVTASSDHTARLWDLSA 289 (311)
T ss_pred CcEEEeecCCceEEEEecCCc--e------eeEEEeecCCceEEeeeeccCcc-EEEecCCCCceeeccccc
Confidence 5 8999999999999965431 1 12234579999999999999987 688999999999999875
No 11
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.6e-36 Score=256.38 Aligned_cols=292 Identities=31% Similarity=0.546 Sum_probs=225.1
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeee----eeee-----ecceecceEEEEECCC
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC----KAVL-----EEMHTRTVRSCAWSPS 85 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~----~~~~-----~~~h~~~v~~~~~s~~ 85 (352)
..+. |+.+|.+.+|+|.+ ...+++++.|-+.|+|++......... +..+ ...-+..|++++|+.+
T Consensus 173 kvl~-~~~~V~~~~WnP~~-----~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~ 246 (524)
T KOG0273|consen 173 KVLR-HESEVFICAWNPLR-----DGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNND 246 (524)
T ss_pred eecc-CCCceEEEecCchh-----hhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCC
Confidence 3444 99999999999975 237999999999999998641100000 0000 0112467999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
|..||+|+.||.+++|+..+. .+.++..|.++|.++.|+..|++|++++-|+++.+||...+... ..+.-|..+
T Consensus 247 G~~LatG~~~G~~riw~~~G~---l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~---q~f~~~s~~ 320 (524)
T KOG0273|consen 247 GTLLATGSEDGEARIWNKDGN---LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVK---QQFEFHSAP 320 (524)
T ss_pred CCeEEEeecCcEEEEEecCch---hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEE---EeeeeccCC
Confidence 999999999999999986543 46678899999999999999999999999999999998665432 223345655
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 166 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
...+.|-.+ .-+++.+.|+.|+++.+....+ ..++ .+|.++|.+|.|+|.+.+|+|++.|+++|||....
T Consensus 321 ~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P-----~~t~----~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~ 390 (524)
T KOG0273|consen 321 ALDVDWQSN-DEFATSSTDGCIHVCKVGEDRP-----VKTF----IGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQ 390 (524)
T ss_pred ccceEEecC-ceEeecCCCceEEEEEecCCCc-----ceee----ecccCceEEEEECCCCceEEEecCCCeeEeeecCC
Confidence 567888654 4578999999999998765432 2222 37999999999999999999999999999997532
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCc----------eEEecCCCCeEEEEEccCCccccCcccceeeeccc
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG----------IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK 315 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 315 (352)
... ...+ ..|...|+.+.|+|.+ ++++++.|+++++|+.... ..+..+.
T Consensus 391 ~~~-----------~~~l-~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~g---------v~i~~f~ 449 (524)
T KOG0273|consen 391 SNS-----------VHDL-QAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESG---------VPIHTLM 449 (524)
T ss_pred Ccc-----------hhhh-hhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCC---------ceeEeec
Confidence 110 0111 1367788888888732 6999999999999976432 3455678
Q ss_pred ccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 316 ~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.|+.+|++++|||+++ ++|+|+.||.|.||++..
T Consensus 450 kH~~pVysvafS~~g~-ylAsGs~dg~V~iws~~~ 483 (524)
T KOG0273|consen 450 KHQEPVYSVAFSPNGR-YLASGSLDGCVHIWSTKT 483 (524)
T ss_pred cCCCceEEEEecCCCc-EEEecCCCCeeEeccccc
Confidence 8999999999999987 689999999999999864
No 12
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.6e-36 Score=252.59 Aligned_cols=301 Identities=25% Similarity=0.411 Sum_probs=228.9
Q ss_pred CCccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC
Q 018675 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS 85 (352)
Q Consensus 6 ~~~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 85 (352)
+-.++....+.|..|+++|+.+.|+++ |++|||+|.|.+..+|....... .+..... ..|..+|..+.||||
T Consensus 209 ~~qip~qt~qil~~htdEVWfl~FS~n------GkyLAsaSkD~Taiiw~v~~d~~-~kl~~tl-vgh~~~V~yi~wSPD 280 (519)
T KOG0293|consen 209 RLQIPSQTWQILQDHTDEVWFLQFSHN------GKYLASASKDSTAIIWIVVYDVH-FKLKKTL-VGHSQPVSYIMWSPD 280 (519)
T ss_pred cccCCchhhhhHhhCCCcEEEEEEcCC------CeeEeeccCCceEEEEEEecCcc-eeeeeee-ecccCceEEEEECCC
Confidence 344555667788999999999999997 78999999999999998765443 2333333 358899999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec-Ccc
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG-HAQ 164 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-h~~ 164 (352)
.++|++++.|..+.+||..+++...... .++...+.+++|.|||..+++|+.|+++..||+.. +.... ..+ ...
T Consensus 281 dryLlaCg~~e~~~lwDv~tgd~~~~y~-~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg-n~~~~---W~gvr~~ 355 (519)
T KOG0293|consen 281 DRYLLACGFDEVLSLWDVDTGDLRHLYP-SGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG-NILGN---WEGVRDP 355 (519)
T ss_pred CCeEEecCchHheeeccCCcchhhhhcc-cCcCCCcceeEEccCCceeEecCCCCcEEEecCCc-chhhc---ccccccc
Confidence 9999999999999999998886432211 23457899999999999999999999999999853 22221 222 124
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.|.+++..+||+.+++...|..|++|+.+..... ..+ ....+|.+++.+.+++++++.-.+..+.+||++
T Consensus 356 ~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr-----~li-----se~~~its~~iS~d~k~~LvnL~~qei~LWDl~ 425 (519)
T KOG0293|consen 356 KVHDLAITYDGKYVLLVTVDKKIRLYNREARVDR-----GLI-----SEEQPITSFSISKDGKLALVNLQDQEIHLWDLE 425 (519)
T ss_pred eeEEEEEcCCCcEEEEEecccceeeechhhhhhh-----ccc-----cccCceeEEEEcCCCcEEEEEcccCeeEEeecc
Confidence 6889999999999999999999999976543211 111 234689999999999999999999999999986
Q ss_pred cccccc-CCCCccceeeEEeecccCcceEEEEecC--CceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcce
Q 018675 245 ITRMQS-GDGYASWRHLCTISGYHDRTIFSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV 321 (352)
Q Consensus 245 ~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 321 (352)
..+... ..|++. ..-+..-+|.. +.++++|+.|+.|++|....+ .++..+.||...|
T Consensus 426 e~~lv~kY~Ghkq-----------~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sg---------kll~~LsGHs~~v 485 (519)
T KOG0293|consen 426 ENKLVRKYFGHKQ-----------GHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISG---------KLLAVLSGHSKTV 485 (519)
T ss_pred hhhHHHHhhcccc-----------cceEEEeccCCCCcceEEecCCCceEEEEEccCC---------ceeEeecCCccee
Confidence 332211 111110 01122223332 358999999999999966442 3456778999999
Q ss_pred eEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 322 NSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 322 ~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
++++|+|..+.++||+|+||+||||...
T Consensus 486 NcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 486 NCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred eEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 9999999999999999999999999876
No 13
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=2.1e-35 Score=242.32 Aligned_cols=300 Identities=21% Similarity=0.362 Sum_probs=231.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+.+|.+|++.|++++.+|+ .++++|||.|....||++.++.....+ ..|+.+|+++.|+.+|.+|||
T Consensus 55 dS~~tF~~H~~svFavsl~P~------~~l~aTGGgDD~AflW~~~~ge~~~el-----tgHKDSVt~~~FshdgtlLAT 123 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPN------NNLVATGGGDDLAFLWDISTGEFAGEL-----TGHKDSVTCCSFSHDGTLLAT 123 (399)
T ss_pred cceeehhhcCCceEEEEeCCC------CceEEecCCCceEEEEEccCCcceeEe-----cCCCCceEEEEEccCceEEEe
Confidence 345789999999999999995 479999999999999999887633222 459999999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
|..+|.+.||...++..+ ..+.+.-+.+.-+.|+|.+..|++|+.||.+++|.+... .....+.+|+.++++-.|
T Consensus 124 GdmsG~v~v~~~stg~~~--~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~---~~~kv~~Gh~~~ct~G~f 198 (399)
T KOG0296|consen 124 GDMSGKVLVFKVSTGGEQ--WKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ---ALCKVMSGHNSPCTCGEF 198 (399)
T ss_pred cCCCccEEEEEcccCceE--EEeecccCceEEEEecccccEEEeecCCCcEEEEECCCc---ceeeEecCCCCCcccccc
Confidence 999999999998776432 333334566777899999999999999999999999754 345678899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCC---------CceeEe------ee---------------------------ecc
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSD---------NWHCVQ------TI---------------------------SES 209 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~---------~~~~~~------~~---------------------------~~~ 209 (352)
.|+|+.++++..|++|++|+....... ...++. ++ ...
T Consensus 199 ~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l 278 (399)
T KOG0296|consen 199 IPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPEL 278 (399)
T ss_pred cCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccc
Confidence 999999999999999999987543110 000000 00 000
Q ss_pred CCCCcccEEEEEE---cCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecC
Q 018675 210 NNGHSSTIWALSF---NAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGA 286 (352)
Q Consensus 210 ~~~h~~~i~~l~~---~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~ 286 (352)
...++..+.+|.+ +..-.+.|+|+-||+|.|||+.... .+... .|...|..+.|-+..++++++
T Consensus 279 ~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~-----------~R~~c--~he~~V~~l~w~~t~~l~t~c 345 (399)
T KOG0296|consen 279 KPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAAST-----------LRHIC--EHEDGVTKLKWLNTDYLLTAC 345 (399)
T ss_pred cccchhhhhhhhhcccccccchhhcccccceEEEEecccch-----------hheec--cCCCceEEEEEcCcchheeec
Confidence 0123333334443 4455678889999999999975321 12211 367779999999988999999
Q ss_pred CCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 287 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 287 ~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.||.++.|+...+ .++..+.||+..|.+++++|+.+ +++|+|.|++.+||++.+
T Consensus 346 ~~g~v~~wDaRtG---------~l~~~y~GH~~~Il~f~ls~~~~-~vvT~s~D~~a~VF~v~~ 399 (399)
T KOG0296|consen 346 ANGKVRQWDARTG---------QLKFTYTGHQMGILDFALSPQKR-LVVTVSDDNTALVFEVPN 399 (399)
T ss_pred cCceEEeeecccc---------ceEEEEecCchheeEEEEcCCCc-EEEEecCCCeEEEEecCC
Confidence 9999999976543 34556789999999999999876 688999999999999863
No 14
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=3.7e-36 Score=268.96 Aligned_cols=261 Identities=25% Similarity=0.424 Sum_probs=209.5
Q ss_pred CccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc--------eeeee-------------
Q 018675 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS--------RFWNC------------- 65 (352)
Q Consensus 7 ~~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~--------~~~~~------------- 65 (352)
.+.+-.+..++..-...|+|..|+++ ..++|.|-.|-.|++|.+...+ .+...
T Consensus 364 ~~lpSic~YT~~nt~~~v~ca~fSdd------ssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D 437 (707)
T KOG0263|consen 364 NSLPSICMYTFHNTYQGVTCAEFSDD------SSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLD 437 (707)
T ss_pred CCCCcEEEEEEEEcCCcceeEeecCC------cchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhcc
Confidence 34444566666555568899999987 4689999999999999876421 00000
Q ss_pred -----eeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC
Q 018675 66 -----KAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK 140 (352)
Q Consensus 66 -----~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~ 140 (352)
....-..|.++|+.+.|+|+.++|++++.|+++++|...+. .++...+||..+|+.+.|+|-|-+|||+|.|+
T Consensus 438 ~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~--s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~ 515 (707)
T KOG0263|consen 438 DDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTW--SCLVIYKGHLAPVWDVQFAPRGYYFATASHDQ 515 (707)
T ss_pred ccCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccc--eeEEEecCCCcceeeEEecCCceEEEecCCCc
Confidence 00001359999999999999999999999999999998765 45666789999999999999999999999999
Q ss_pred cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEE
Q 018675 141 SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220 (352)
Q Consensus 141 ~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l 220 (352)
+.++|.... ..+.+.+.+|...+.|+.|||+..++++||.|.++++||+..... ... ..||..+|.+|
T Consensus 516 tArLWs~d~---~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~-----VRi----F~GH~~~V~al 583 (707)
T KOG0263|consen 516 TARLWSTDH---NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS-----VRI----FTGHKGPVTAL 583 (707)
T ss_pred eeeeeeccc---CCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcE-----EEE----ecCCCCceEEE
Confidence 999999754 345778899999999999999999999999999999998766532 222 24899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCc
Q 018675 221 SFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDD 300 (352)
Q Consensus 221 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~ 300 (352)
+|+|.|++|++|+.||.|++||+...
T Consensus 584 ~~Sp~Gr~LaSg~ed~~I~iWDl~~~------------------------------------------------------ 609 (707)
T KOG0263|consen 584 AFSPCGRYLASGDEDGLIKIWDLANG------------------------------------------------------ 609 (707)
T ss_pred EEcCCCceEeecccCCcEEEEEcCCC------------------------------------------------------
Confidence 99999999999999999999987411
Q ss_pred cccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 301 ~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.++.+..+|.+.|++++||.+|. +||+||.|.+|++||+.+
T Consensus 610 --------~~v~~l~~Ht~ti~SlsFS~dg~-vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 610 --------SLVKQLKGHTGTIYSLSFSRDGN-VLASGGADNSVRLWDLTK 650 (707)
T ss_pred --------cchhhhhcccCceeEEEEecCCC-EEEecCCCCeEEEEEchh
Confidence 11223457888888888888875 788888888888888764
No 15
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-35 Score=231.90 Aligned_cols=254 Identities=21% Similarity=0.343 Sum_probs=198.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+..|.||+..|..+..+|+ +++++|+|.|+++|+||+.+++. ...+ ..|..-|.+++|+||.+.+++
T Consensus 54 ~~~r~~~GHsH~v~dv~~s~d------g~~alS~swD~~lrlWDl~~g~~----t~~f-~GH~~dVlsva~s~dn~qivS 122 (315)
T KOG0279|consen 54 VPVRRLTGHSHFVSDVVLSSD------GNFALSASWDGTLRLWDLATGES----TRRF-VGHTKDVLSVAFSTDNRQIVS 122 (315)
T ss_pred ceeeeeeccceEecceEEccC------CceEEeccccceEEEEEecCCcE----EEEE-EecCCceEEEEecCCCceeec
Confidence 567789999999999999997 58999999999999999988742 2222 459999999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeecc--ccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEG--HENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~--h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
|+-|++|++|+..+. +..++.. +.+-|.|++|+|+ ...|+++|+|++|++||+... +....+.+|+..++
T Consensus 123 GSrDkTiklwnt~g~---ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~---~l~~~~~gh~~~v~ 196 (315)
T KOG0279|consen 123 GSRDKTIKLWNTLGV---CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNC---QLRTTFIGHSGYVN 196 (315)
T ss_pred CCCcceeeeeeeccc---EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCc---chhhccccccccEE
Confidence 999999999997653 3444433 3778999999997 678999999999999998644 34567789999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
.++++|||..+++|+.||.+-+||+.+.. +++.+ .|...|++++|+|+..-|+.+. +..|+|||++...
T Consensus 197 t~~vSpDGslcasGgkdg~~~LwdL~~~k-----~lysl-----~a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 197 TVTVSPDGSLCASGGKDGEAMLWDLNEGK-----NLYSL-----EAFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKA 265 (315)
T ss_pred EEEECCCCCEEecCCCCceEEEEEccCCc-----eeEec-----cCCCeEeeEEecCCceeEeecc-CCceEEEeccchh
Confidence 99999999999999999999999987653 34444 4778999999999976555544 4569999987543
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
.........-.+ ..........+++|+++| .+.+|-.|+.|++|..
T Consensus 266 ~v~~l~~d~~g~---s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv 312 (315)
T KOG0279|consen 266 VVEELKLDGIGP---SSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQV 312 (315)
T ss_pred hhhhcccccccc---ccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEe
Confidence 322111110000 001122335578888877 7999999999999954
No 16
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=2.4e-34 Score=246.27 Aligned_cols=299 Identities=19% Similarity=0.364 Sum_probs=230.0
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 94 (352)
.+++.|+.-|+|+.|+|+ +.+|||+|.||++.+||-.++++...+.. ...|++.|++++|+||++.++|++.
T Consensus 184 ~s~r~HskFV~~VRysPD------G~~Fat~gsDgki~iyDGktge~vg~l~~--~~aHkGsIfalsWsPDs~~~~T~Sa 255 (603)
T KOG0318|consen 184 SSFREHSKFVNCVRYSPD------GSRFATAGSDGKIYIYDGKTGEKVGELED--SDAHKGSIFALSWSPDSTQFLTVSA 255 (603)
T ss_pred ecccccccceeeEEECCC------CCeEEEecCCccEEEEcCCCccEEEEecC--CCCccccEEEEEECCCCceEEEecC
Confidence 456789999999999998 57999999999999999888765443322 3579999999999999999999999
Q ss_pred CCcEEEEEccCCce-----------------------------------------eeeEeeccccCCeeEEEECCCCcEE
Q 018675 95 DATTCIWEDVGGDY-----------------------------------------ECVATLEGHENEVKSVSWNASGTLL 133 (352)
Q Consensus 95 d~~i~i~~~~~~~~-----------------------------------------~~~~~~~~h~~~v~~v~~~~~~~~l 133 (352)
|.+++|||..+... .+..++.+|+..|+++..+|++.+|
T Consensus 256 Dkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i 335 (603)
T KOG0318|consen 256 DKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTI 335 (603)
T ss_pred CceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEE
Confidence 99999999643321 0234567899999999999999999
Q ss_pred EEeeCCCcEEEEecCCCCeeE-------------------------------E---------------------------
Q 018675 134 ATCGRDKSVWIWEVMPGNEFE-------------------------------C--------------------------- 155 (352)
Q Consensus 134 ~s~~~d~~v~vwd~~~~~~~~-------------------------------~--------------------------- 155 (352)
++|+.||.|.-|+...+.... .
T Consensus 336 ~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~ 415 (603)
T KOG0318|consen 336 YSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLS 415 (603)
T ss_pred EeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcC
Confidence 999999999999874221100 0
Q ss_pred ------------EEEeecCc--------cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 156 ------------VSVLQGHA--------QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 156 ------------~~~~~~h~--------~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
+..++.+. ....+++.+|++..++.|++|+.+++|.+....... +.....|..
T Consensus 416 d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~e-------e~~~~~h~a 488 (603)
T KOG0318|consen 416 DGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKE-------EAKLLEHRA 488 (603)
T ss_pred CCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccc-------eeeeecccC
Confidence 00011000 123467789999999999999999999876532111 112235889
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEE
Q 018675 216 TIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294 (352)
Q Consensus 216 ~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~ 294 (352)
+|++++|+||+.|||+|...+.+.+||....... .....+|...|.+++|+|+. ++|+|+-|-.|.+|
T Consensus 489 ~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~-----------~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiy 557 (603)
T KOG0318|consen 489 AITDVAYSPDGAYLAAGDASRKVVLYDVASREVK-----------TNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIY 557 (603)
T ss_pred CceEEEECCCCcEEEEeccCCcEEEEEcccCcee-----------cceeeeeeeeEEEEEeCCCceEEEeccccceEEEE
Confidence 9999999999999999999999999997643321 12234688899999999976 89999999999999
Q ss_pred EccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 295 VESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
...+ +... +.-..+|.+.|+.++|..+. .++|.|.|-.||+|.+.
T Consensus 558 sv~k------P~~~--i~iknAH~~gVn~v~wlde~--tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 558 SVKK------PAKH--IIIKNAHLGGVNSVAWLDES--TVVSSGQDANIKVWNVT 602 (603)
T ss_pred EccC------hhhh--eEeccccccCceeEEEecCc--eEEeccCcceeEEeccc
Confidence 7643 2222 23345798889999998643 47899999999999985
No 17
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=5e-35 Score=239.67 Aligned_cols=296 Identities=23% Similarity=0.372 Sum_probs=234.7
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
+....++||.+.|.|+++-|. .+.|+|||.|++++|||+.++.-..+ + ..|...|..+++|+-..++.+
T Consensus 142 Kl~rVi~gHlgWVr~vavdP~------n~wf~tgs~DrtikIwDlatg~Lklt----l-tGhi~~vr~vavS~rHpYlFs 210 (460)
T KOG0285|consen 142 KLYRVISGHLGWVRSVAVDPG------NEWFATGSADRTIKIWDLATGQLKLT----L-TGHIETVRGVAVSKRHPYLFS 210 (460)
T ss_pred eehhhhhhccceEEEEeeCCC------ceeEEecCCCceeEEEEcccCeEEEe----e-cchhheeeeeeecccCceEEE
Confidence 445568899999999999996 47999999999999999998753222 2 347788999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
++.|+.|+.||.+..+ .+....||-+.|.|++.+|.-..|++|+.|.+++|||++.- ..+..+.+|...|..+.+
T Consensus 211 ~gedk~VKCwDLe~nk--vIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr---~~V~~l~GH~~~V~~V~~ 285 (460)
T KOG0285|consen 211 AGEDKQVKCWDLEYNK--VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR---ASVHVLSGHTNPVASVMC 285 (460)
T ss_pred ecCCCeeEEEechhhh--hHHHhccccceeEEEeccccceeEEecCCcceEEEeeeccc---ceEEEecCCCCcceeEEe
Confidence 9999999999987653 45667899999999999999999999999999999999754 357889999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
.|.+..+++||.|++|++||+.... ...++. .|...|.+++.+|....+|+++.| .|+-|++....+.
T Consensus 286 ~~~dpqvit~S~D~tvrlWDl~agk-----t~~tlt----~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~-- 353 (460)
T KOG0285|consen 286 QPTDPQVITGSHDSTVRLWDLRAGK-----TMITLT----HHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFL-- 353 (460)
T ss_pred ecCCCceEEecCCceEEEeeeccCc-----eeEeee----cccceeeEEecCCchhhhhccCCc-cceeccCCccchh--
Confidence 9999999999999999999876542 122332 578899999999999999999887 5899987533221
Q ss_pred CCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeec-ccccCcceeEEEecCCC
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK-EKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~i~~~~~sp~~ 330 (352)
..+ ..|...+.+++...++++++|+.+|.+.+|+....--++.. ..+++. ...-+..|++.+|...+
T Consensus 354 ---------~nl-sgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~~--~t~vqpGSl~sEagI~as~fDktg 421 (460)
T KOG0285|consen 354 ---------QNL-SGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQRG--QTIVQPGSLESEAGIFASCFDKTG 421 (460)
T ss_pred ---------hcc-ccccceeeeeeeccCceEEEcCCceEEEEEecCcCcccccc--cccccCCccccccceeEEeecccC
Confidence 111 23555678888888999999999999999987643222110 011110 11234679999998888
Q ss_pred cceEEEecCCCeEEEEee
Q 018675 331 RRLLASASDDGMIKIWEL 348 (352)
Q Consensus 331 ~~~l~s~~~Dg~i~iw~~ 348 (352)
.+ |+||..|++|++|+=
T Consensus 422 ~r-lit~eadKtIk~~ke 438 (460)
T KOG0285|consen 422 SR-LITGEADKTIKMYKE 438 (460)
T ss_pred ce-EEeccCCcceEEEec
Confidence 76 569999999999974
No 18
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=9.1e-35 Score=232.99 Aligned_cols=292 Identities=26% Similarity=0.447 Sum_probs=229.4
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCC-ceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS-SRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
+-.+.||++.|+.+.|+|+ +++|||||.|..|-+|+.... +.+++. +.|.++|..+.|.+|+..|+++
T Consensus 40 ~m~l~gh~geI~~~~F~P~------gs~~aSgG~Dr~I~LWnv~gdceN~~~l-----kgHsgAVM~l~~~~d~s~i~S~ 108 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPD------GSCFASGGSDRAIVLWNVYGDCENFWVL-----KGHSGAVMELHGMRDGSHILSC 108 (338)
T ss_pred hhhcCCCcceEEEEEECCC------CCeEeecCCcceEEEEeccccccceeee-----ccccceeEeeeeccCCCEEEEe
Confidence 3456799999999999996 579999999999999996543 222332 4699999999999999999999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
+.|.+++.||.+++ +++...++|..-|+++.-+.-| .++.+++.|+++++||++... .+.++ ....+++++.|
T Consensus 109 gtDk~v~~wD~~tG--~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~---~~~t~-~~kyqltAv~f 182 (338)
T KOG0265|consen 109 GTDKTVRGWDAETG--KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE---AIKTF-ENKYQLTAVGF 182 (338)
T ss_pred cCCceEEEEecccc--eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc---hhhcc-ccceeEEEEEe
Confidence 99999999999887 4566778899999988743333 468889999999999997433 23322 23457899999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
..+...+++|+-|+.|++|+++..+ ..+.+ .||..+|+.|..+|+|.++.+-+.|.++++||++-...
T Consensus 183 ~d~s~qv~sggIdn~ikvWd~r~~d-----~~~~l----sGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p--- 250 (338)
T KOG0265|consen 183 KDTSDQVISGGIDNDIKVWDLRKND-----GLYTL----SGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAP--- 250 (338)
T ss_pred cccccceeeccccCceeeeccccCc-----ceEEe----ecccCceeeEEeccCCCccccccccceEEEEEecccCC---
Confidence 9999999999999999999876543 23333 48999999999999999999999999999999863211
Q ss_pred CCCccceeeEEeecc---cCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEec
Q 018675 252 DGYASWRHLCTISGY---HDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 327 (352)
..+....+.+. .+......+|+|++ .+.+|+.|..+++|+... ..++.++.||.+.|++++|+
T Consensus 251 ----~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~---------r~~lyklpGh~gsvn~~~Fh 317 (338)
T KOG0265|consen 251 ----SQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTS---------RRILYKLPGHYGSVNEVDFH 317 (338)
T ss_pred ----CCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeeccc---------ccEEEEcCCcceeEEEeeec
Confidence 11112222221 23345667899976 688899999999996543 34566789999999999999
Q ss_pred CCCcceEEEecCCCeEEEEee
Q 018675 328 PGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 328 p~~~~~l~s~~~Dg~i~iw~~ 348 (352)
|..+ +|.+++.|++|.+=++
T Consensus 318 p~e~-iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 318 PTEP-IILSCSSDKTIYLGEI 337 (338)
T ss_pred CCCc-EEEEeccCceeEeecc
Confidence 9875 7789999999987544
No 19
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=6.6e-34 Score=259.19 Aligned_cols=296 Identities=34% Similarity=0.563 Sum_probs=231.1
Q ss_pred eeeeecCC-ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 13 EIQTLEGH-TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 13 ~~~~~~gH-~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
....+.+| ...|.|+.|+|+ +..+++++.|+.+++|+...... ...... ..|...|+.++|+|+++++++
T Consensus 150 ~~~~~~~~~~~sv~~~~fs~~------g~~l~~~~~~~~i~~~~~~~~~~--~~~~~l-~~h~~~v~~~~fs~d~~~l~s 220 (456)
T KOG0266|consen 150 LEQTLAGHECPSVTCVDFSPD------GRALAAASSDGLIRIWKLEGIKS--NLLREL-SGHTRGVSDVAFSPDGSYLLS 220 (456)
T ss_pred eeeeecccccCceEEEEEcCC------CCeEEEccCCCcEEEeecccccc--hhhccc-cccccceeeeEECCCCcEEEE
Confidence 35566555 889999999997 56899999999999999854431 111112 458899999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
++.|+++++||... ....+.++.+|...|++++|+|+++++++|+.|++|++||++.+ +++..+.+|...|++++|
T Consensus 221 ~s~D~tiriwd~~~-~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~---~~~~~l~~hs~~is~~~f 296 (456)
T KOG0266|consen 221 GSDDKTLRIWDLKD-DGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG---ECVRKLKGHSDGISGLAF 296 (456)
T ss_pred ecCCceEEEeeccC-CCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC---eEEEeeeccCCceEEEEE
Confidence 99999999999832 23567888999999999999999999999999999999999763 577889999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc--cEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS--TIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~--~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (352)
++++..+++++.|+.|++||+...... +...+. ++.. ++.++.|+|++.+++++..|+.+++|++......
T Consensus 297 ~~d~~~l~s~s~d~~i~vwd~~~~~~~---~~~~~~----~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~ 369 (456)
T KOG0266|consen 297 SPDGNLLVSASYDGTIRVWDLETGSKL---CLKLLS----GAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSV 369 (456)
T ss_pred CCCCCEEEEcCCCccEEEEECCCCcee---eeeccc----CCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcce
Confidence 999999999999999999987654211 222222 2222 6999999999999999999999999998633211
Q ss_pred cCCCCccceeeEEeecccC--cceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeeccccc-CcceeEEE
Q 018675 250 SGDGYASWRHLCTISGYHD--RTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQ 325 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~ 325 (352)
. ...+.+. ..+++....+. ..+++|+.|+.+++|+... ...++...+| ...+..++
T Consensus 370 ~-----------~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s---------~~~~~~l~~h~~~~~~~~~ 429 (456)
T KOG0266|consen 370 G-----------TYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSS---------GGILQRLEGHSKAAVSDLS 429 (456)
T ss_pred e-----------eecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCc---------cchhhhhcCCCCCceeccc
Confidence 0 0111111 13333333443 4899999999999997653 2334566788 88999999
Q ss_pred ecCCCcceEEEec--CCCeEEEEeec
Q 018675 326 WSPGERRLLASAS--DDGMIKIWELA 349 (352)
Q Consensus 326 ~sp~~~~~l~s~~--~Dg~i~iw~~~ 349 (352)
++|.. +++++++ .|+.+++|...
T Consensus 430 ~~~~~-~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 430 SHPTE-NLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred cCCCc-CeeeecCcCCCceEEEecCC
Confidence 99976 5788888 79999999864
No 20
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=5.7e-36 Score=253.88 Aligned_cols=298 Identities=23% Similarity=0.415 Sum_probs=232.7
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
+.+.+.++.||++.|+++.|.|.. +.+|+++|.|+.|+||+...... +...+ ..|..+|.+++|+++|+.+
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~-----~hLlLS~gmD~~vklW~vy~~~~---~lrtf-~gH~k~Vrd~~~s~~g~~f 273 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKK-----GHLLLSGGMDGLVKLWNVYDDRR---CLRTF-KGHRKPVRDASFNNCGTSF 273 (503)
T ss_pred cHhheeeccCCccccchhhhccce-----eeEEEecCCCceEEEEEEecCcc---eehhh-hcchhhhhhhhccccCCee
Confidence 346778899999999999999954 57999999999999999876432 23333 4699999999999999999
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
++++.|+.+++||.++|.. ...+. -...+.|+.|+|++ +.|++|+.|+.|+.||++.++ .+..+..|-..|..
T Consensus 274 LS~sfD~~lKlwDtETG~~--~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k---vvqeYd~hLg~i~~ 347 (503)
T KOG0282|consen 274 LSASFDRFLKLWDTETGQV--LSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK---VVQEYDRHLGAILD 347 (503)
T ss_pred eeeecceeeeeeccccceE--EEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchH---HHHHHHhhhhheee
Confidence 9999999999999998853 43332 24568899999988 789999999999999998764 34556778889999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc-c
Q 018675 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT-R 247 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~-~ 247 (352)
+.|-+.+..+++.+.|++++||+....-. ++. ....+.....++..+|++..++.-+.|+.|.+|.+... +
T Consensus 348 i~F~~~g~rFissSDdks~riWe~~~~v~-----ik~---i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r 419 (503)
T KOG0282|consen 348 ITFVDEGRRFISSSDDKSVRIWENRIPVP-----IKN---IADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFR 419 (503)
T ss_pred eEEccCCceEeeeccCccEEEEEcCCCcc-----chh---hcchhhccCcceecCCCCCeehhhccCceEEEEecccccc
Confidence 99999999999999999999997654321 111 11123345678999999999999999999999986532 1
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
+......+ -+.. .+--..+.++|++ +|++|.+||.+.+|+.+.. .++.+..+|++.+..+.|
T Consensus 420 ~nkkK~fe----Gh~v----aGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~---------kl~~~lkah~~~ci~v~w 482 (503)
T KOG0282|consen 420 LNKKKRFE----GHSV----AGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTT---------KLVSKLKAHDQPCIGVDW 482 (503)
T ss_pred cCHhhhhc----ceec----cCceeeEEEcCCCCeEEeecCCccEEEeechhh---------hhhhccccCCcceEEEEe
Confidence 11110000 0111 1223457888876 8999999999999976532 334567899999999999
Q ss_pred cCCCcceEEEecCCCeEEEEe
Q 018675 327 SPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
+|....-+||+|.||.|++|+
T Consensus 483 HP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 483 HPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred cCCCcceeEecccCceeEecC
Confidence 999888899999999999996
No 21
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=2.9e-35 Score=263.28 Aligned_cols=208 Identities=30% Similarity=0.561 Sum_probs=182.3
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
..+|.||.++|++..|+|++ .+|+|||.|+++|+|.+.+.. +. ...+.|..+|..+.|+|-|-++||++
T Consensus 444 ~~~L~GH~GPVyg~sFsPd~------rfLlScSED~svRLWsl~t~s----~~-V~y~GH~~PVwdV~F~P~GyYFatas 512 (707)
T KOG0263|consen 444 SRTLYGHSGPVYGCSFSPDR------RFLLSCSEDSSVRLWSLDTWS----CL-VIYKGHLAPVWDVQFAPRGYYFATAS 512 (707)
T ss_pred eEEeecCCCceeeeeecccc------cceeeccCCcceeeeecccce----eE-EEecCCCcceeeEEecCCceEEEecC
Confidence 34589999999999999984 799999999999999998753 22 23357999999999999999999999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.|++.++|..... .+...+.+|.+.|.|+.|+|+.+++++||.|++|++||+.++. .++.+.||..+|.+++|+|
T Consensus 513 ~D~tArLWs~d~~--~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~---~VRiF~GH~~~V~al~~Sp 587 (707)
T KOG0263|consen 513 HDQTARLWSTDHN--KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGN---SVRIFTGHKGPVTALAFSP 587 (707)
T ss_pred CCceeeeeecccC--CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCc---EEEEecCCCCceEEEEEcC
Confidence 9999999986543 4455678999999999999999999999999999999998775 4778899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
+|.+|++|+.|+.|.+||+.... +.....+|++.|.+|.|+.+|..||+||.|+.|++||+...
T Consensus 588 ~Gr~LaSg~ed~~I~iWDl~~~~---------~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 588 CGRYLASGDEDGLIKIWDLANGS---------LVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred CCceEeecccCCcEEEEEcCCCc---------chhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 99999999999999999886642 12234589999999999999999999999999999998643
No 22
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=7.3e-35 Score=239.10 Aligned_cols=291 Identities=29% Similarity=0.474 Sum_probs=239.3
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
.+.+.+.||...|+.+-|+|+. ..+++++.|+++++||..++.- .. .-+.|+..|.+++|+..|++|++
T Consensus 99 ~l~~~l~g~r~~vt~v~~hp~~------~~v~~as~d~tikv~D~~tg~~----e~-~LrGHt~sv~di~~~a~Gk~l~t 167 (406)
T KOG0295|consen 99 NLVQKLAGHRSSVTRVIFHPSE------ALVVSASEDATIKVFDTETGEL----ER-SLRGHTDSVFDISFDASGKYLAT 167 (406)
T ss_pred CchhhhhccccceeeeeeccCc------eEEEEecCCceEEEEEccchhh----hh-hhhccccceeEEEEecCccEEEe
Confidence 4556788999999999999974 6889999999999999987642 11 22568999999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
++.|-.+++||..+. ..++..+.+|...|.++.|-|.|.++++++.|.+|+.|++..+ .++..+.+|.+-+..++.
T Consensus 168 cSsDl~~~LWd~~~~-~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg---~cv~t~~~h~ewvr~v~v 243 (406)
T KOG0295|consen 168 CSSDLSAKLWDFDTF-FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTG---YCVKTFPGHSEWVRMVRV 243 (406)
T ss_pred cCCccchhheeHHHH-HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccc---eeEEeccCchHhEEEEEe
Confidence 999999999997543 4567778899999999999999999999999999999998755 578889999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC---------------CCEEEEEeCCC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK---------------GDKLVSCSDDL 236 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~---------------~~~l~s~~~dg 236 (352)
+.|+.++++++.|.++++|-+... .|... ...|+-+|-+++|-|. +.++.+++.|+
T Consensus 244 ~~DGti~As~s~dqtl~vW~~~t~-----~~k~~----lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDk 314 (406)
T KOG0295|consen 244 NQDGTIIASCSNDQTLRVWVVATK-----QCKAE----LREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDK 314 (406)
T ss_pred cCCeeEEEecCCCceEEEEEeccc-----hhhhh----hhccccceEEEEecccccCcchhhccCCCCCccEEEeecccc
Confidence 999999999999999999965442 12222 2368888888888652 25899999999
Q ss_pred cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeeccc
Q 018675 237 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK 315 (352)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 315 (352)
+||+||+..... +-++ ..|++.|..++++|.| +++++..|+++++|+.... .......
T Consensus 315 tIk~wdv~tg~c-----------L~tL-~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~---------~cmk~~~ 373 (406)
T KOG0295|consen 315 TIKIWDVSTGMC-----------LFTL-VGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNL---------QCMKTLE 373 (406)
T ss_pred eEEEEeccCCeE-----------EEEE-ecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccc---------eeeeccC
Confidence 999999864321 1122 3488899999999977 8999999999999977542 2233455
Q ss_pred ccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 316 ~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.|..-+++++|+-+-. +++||+-|.++++|+.
T Consensus 374 ah~hfvt~lDfh~~~p-~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 374 AHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWEC 405 (406)
T ss_pred CCcceeEEEecCCCCc-eEEeccccceeeeeec
Confidence 8888999999987765 6889999999999985
No 23
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=222.37 Aligned_cols=299 Identities=20% Similarity=0.324 Sum_probs=223.0
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
-|+||..+++.|.++.+ +.+|+||+.|.+..+|-...++.+.. + ..|++.|.||..+-+.+.+++|+.|
T Consensus 5 ~l~GHERplTqiKyN~e------GDLlFscaKD~~~~vw~s~nGerlGt----y-~GHtGavW~~Did~~s~~liTGSAD 73 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNRE------GDLLFSCAKDSTPTVWYSLNGERLGT----Y-DGHTGAVWCCDIDWDSKHLITGSAD 73 (327)
T ss_pred ccccCccccceEEecCC------CcEEEEecCCCCceEEEecCCceeee----e-cCCCceEEEEEecCCcceeeecccc
Confidence 47899999999999886 68999999999999997656654332 2 5699999999999999999999999
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-----CCcEEEEecCCCC----eeEEEEEeecCccCe
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-----DKSVWIWEVMPGN----EFECVSVLQGHAQDV 166 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-----d~~v~vwd~~~~~----~~~~~~~~~~h~~~v 166 (352)
.++++||..+++ ++..++ ...+|+.+.|+++|++++.+.+ .+.|.++|++... ..++...+..+...+
T Consensus 74 ~t~kLWDv~tGk--~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~ski 150 (327)
T KOG0643|consen 74 QTAKLWDVETGK--QLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKI 150 (327)
T ss_pred ceeEEEEcCCCc--EEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccce
Confidence 999999999885 455554 4678999999999998776644 4689999987433 233455666777889
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
+.+-|.|-++++++|.+||.|.+||..... .+......|...|+.++++|+..++++++.|.+-++||....
T Consensus 151 t~a~Wg~l~~~ii~Ghe~G~is~~da~~g~--------~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl 222 (327)
T KOG0643|consen 151 TSALWGPLGETIIAGHEDGSISIYDARTGK--------ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL 222 (327)
T ss_pred eeeeecccCCEEEEecCCCcEEEEEcccCc--------eeeechhhhccccccccccCCcceEEecccCccceeeeccce
Confidence 999999999999999999999999876531 122233358889999999999999999999999999997532
Q ss_pred ccccCCCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEc-cCCccccCcccc----eeeecccccCcc
Q 018675 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVE-SKDDLIDGPSYK----MLLKKEKAHDMD 320 (352)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~-~~~~~~~~~~~~----~~~~~~~~h~~~ 320 (352)
. .+.++. .+.++.+.+++|- ..++.|+.....-+-.. .....++....+ +.+...++|-++
T Consensus 223 ~-----------v~Kty~--te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGP 289 (327)
T KOG0643|consen 223 E-----------VLKTYT--TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGP 289 (327)
T ss_pred e-----------eEEEee--ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccC
Confidence 1 111221 2445666677773 33444433333322211 112222222222 223456899999
Q ss_pred eeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 321 VNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 321 i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|++++|+|+|+ .++|||+||.|||--++.
T Consensus 290 INsvAfhPdGk-sYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 290 INSVAFHPDGK-SYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred cceeEECCCCc-ccccCCCCceEEEEEecc
Confidence 99999999997 689999999999976543
No 24
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=2.5e-33 Score=221.76 Aligned_cols=250 Identities=32% Similarity=0.603 Sum_probs=208.2
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCc
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
.+|+..|.+++|+|. +++||+||.|.++-||....+. +.+...+ +.|...|.+++|+++|++||+++.|++
T Consensus 58 ~~hkrsVRsvAwsp~------g~~La~aSFD~t~~Iw~k~~~e--fecv~~l-EGHEnEVK~Vaws~sG~~LATCSRDKS 128 (312)
T KOG0645|consen 58 DGHKRSVRSVAWSPH------GRYLASASFDATVVIWKKEDGE--FECVATL-EGHENEVKCVAWSASGNYLATCSRDKS 128 (312)
T ss_pred ccchheeeeeeecCC------CcEEEEeeccceEEEeecCCCc--eeEEeee-eccccceeEEEEcCCCCEEEEeeCCCe
Confidence 479999999999997 6899999999999999876543 2344444 569999999999999999999999999
Q ss_pred EEEEEcc-CCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 98 TCIWEDV-GGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 98 i~i~~~~-~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
+=||... ..++.+...++.|.+.|.-+.|+|...+|+++|.|++|++|+-..+...+++..+.+|..-|.+++|+|.+.
T Consensus 129 VWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~ 208 (312)
T KOG0645|consen 129 VWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGS 208 (312)
T ss_pred EEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCc
Confidence 9999764 467889999999999999999999999999999999999999765777889999999999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCcc
Q 018675 177 VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS 256 (352)
Q Consensus 177 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 256 (352)
.|++++.|++++||.... .+ ...|..++..+.|. ...|+|++.|+.|++|.-... .. -..
T Consensus 209 rl~s~sdD~tv~Iw~~~~----------~~---~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~-~d----~p~ 268 (312)
T KOG0645|consen 209 RLVSCSDDGTVSIWRLYT----------DL---SGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDS-PD----EPS 268 (312)
T ss_pred eEEEecCCcceEeeeecc----------Cc---chhcccceEeeeec--ccceEeccCCCEEEEEEecCC-CC----Cch
Confidence 999999999999994221 11 12466789999998 457999999999999954311 00 122
Q ss_pred ceeeEEeecccCcceEEEEecC--CceEEecCCCCeEEEEEc
Q 018675 257 WRHLCTISGYHDRTIFSVHWSR--EGIIASGAADDSVQFFVE 296 (352)
Q Consensus 257 ~~~~~~~~~~~~~~i~~~~~~~--~~~~~s~~~d~~v~~~~~ 296 (352)
|.........|+..|.++.|.| .+++++++.||.+++|..
T Consensus 269 ~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l 310 (312)
T KOG0645|consen 269 WNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWEL 310 (312)
T ss_pred HHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEe
Confidence 3334444456888999999999 579999999999999954
No 25
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2.4e-32 Score=234.80 Aligned_cols=287 Identities=35% Similarity=0.632 Sum_probs=225.1
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+.++++|.+.|++++|+|+ ++++++++.|+.+++|+..+..... ....|...+..+.|+|+++.+++++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~------~~~l~~~~~~g~i~i~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~ 70 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPD------GKLLATGSGDGTIKVWDLETGELLR-----TLKGHTGPVRDVAASADGTYLASGS 70 (289)
T ss_pred chHhcccCCCEEEEEEcCC------CCEEEEeecCcEEEEEEeeCCCcEE-----EEecCCcceeEEEECCCCCEEEEEc
Confidence 3567899999999999997 4689999999999999987654211 1134777888999999999999999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.|+.+.+|+...++ ....+..|...+.++.|++++.++++++.|+.+.+||+... .....+..|...+.++.|+|
T Consensus 71 ~~~~i~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~i~~~~~~~ 145 (289)
T cd00200 71 SDKTIRLWDLETGE--CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG---KCLTTLRGHTDWVNSVAFSP 145 (289)
T ss_pred CCCeEEEEEcCccc--ceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc---EEEEEeccCCCcEEEEEEcC
Confidence 99999999987642 34556688889999999999888888888999999998643 33455667888999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCC
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG 253 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (352)
++.++++++.|+.+++|++.... ....+ ..|...|.++.|+|+++.+++++.|+.+++||++..+.
T Consensus 146 ~~~~l~~~~~~~~i~i~d~~~~~-----~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~----- 211 (289)
T cd00200 146 DGTFVASSSQDGTIKLWDLRTGK-----CVATL----TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC----- 211 (289)
T ss_pred cCCEEEEEcCCCcEEEEEccccc-----cceeE----ecCccccceEEECCCcCEEEEecCCCcEEEEECCCCce-----
Confidence 98888888889999999875321 12222 25677899999999999999999999999999753221
Q ss_pred CccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcc
Q 018675 254 YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR 332 (352)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~ 332 (352)
...+ ..+...+.++.+++++ ++++++.++.+++|+.... ........|...|.+++|+|++.
T Consensus 212 ------~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~- 274 (289)
T cd00200 212 ------LGTL-RGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG---------ECVQTLSGHTNSVTSLAWSPDGK- 274 (289)
T ss_pred ------ecch-hhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCc---------eeEEEccccCCcEEEEEECCCCC-
Confidence 1111 1245578889999866 5556666999999976431 12233447888999999999875
Q ss_pred eEEEecCCCeEEEEe
Q 018675 333 LLASASDDGMIKIWE 347 (352)
Q Consensus 333 ~l~s~~~Dg~i~iw~ 347 (352)
+|++++.||.+++|+
T Consensus 275 ~l~~~~~d~~i~iw~ 289 (289)
T cd00200 275 RLASGSADGTIRIWD 289 (289)
T ss_pred EEEEecCCCeEEecC
Confidence 678999999999996
No 26
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=4.8e-32 Score=264.24 Aligned_cols=304 Identities=21% Similarity=0.302 Sum_probs=220.8
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeee-ee-eeeecceecceEEEEECC-CCCEEEEEe
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN-CK-AVLEEMHTRTVRSCAWSP-SGKLLATAS 93 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~-~~-~~~~~~h~~~v~~~~~s~-~~~~l~s~~ 93 (352)
+.+|.+.|++++|+|+ +.+|||||.|++|+||+......... .. ......+...|.+++|+| ++.+|++++
T Consensus 479 ~~~~~~~V~~i~fs~d------g~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~ 552 (793)
T PLN00181 479 LLNSSNLVCAIGFDRD------GEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSN 552 (793)
T ss_pred ccCCCCcEEEEEECCC------CCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEe
Confidence 4469999999999997 57999999999999999753210000 00 011122346789999987 578999999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
.|++|++||..++ ..+..+.+|.+.|++++|+| ++.+|++|+.|++|++||+..+. ++..+..+ ..+.++.|+
T Consensus 553 ~Dg~v~lWd~~~~--~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~---~~~~~~~~-~~v~~v~~~ 626 (793)
T PLN00181 553 FEGVVQVWDVARS--QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV---SIGTIKTK-ANICCVQFP 626 (793)
T ss_pred CCCeEEEEECCCC--eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc---EEEEEecC-CCeEEEEEe
Confidence 9999999998765 34667789999999999997 78899999999999999997654 33444444 578899995
Q ss_pred -CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 173 -PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 173 -~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
+++..+++|+.|+.|++||+..... .... ..+|...|.++.|. ++.+|++++.|++|++||++.....
T Consensus 627 ~~~g~~latgs~dg~I~iwD~~~~~~----~~~~----~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~-- 695 (793)
T PLN00181 627 SESGRSLAFGSADHKVYYYDLRNPKL----PLCT----MIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISG-- 695 (793)
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCc----cceE----ecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccc--
Confidence 5688999999999999998764321 1112 23788999999997 6789999999999999997532100
Q ss_pred CCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccC---cccceee-ecccccCcceeEEEe
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDG---PSYKMLL-KKEKAHDMDVNSVQW 326 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~---~~~~~~~-~~~~~h~~~i~~~~~ 326 (352)
..+..+..+. .|...+..+.++++ .++++|+.|+.+.+|.......... .....+. .....|...|.+++|
T Consensus 696 ---~~~~~l~~~~-gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~w 771 (793)
T PLN00181 696 ---INETPLHSFM-GHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCW 771 (793)
T ss_pred ---cCCcceEEEc-CCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEE
Confidence 0112223333 35667778888875 4899999999999997543211000 0000000 012346678999999
Q ss_pred cCCCcceEEEecCCCeEEEEee
Q 018675 327 SPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
+|++. .|++|+.||.|+||++
T Consensus 772 s~~~~-~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 772 RGQSS-TLVAANSTGNIKILEM 792 (793)
T ss_pred cCCCC-eEEEecCCCcEEEEec
Confidence 99986 5789999999999986
No 27
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.4e-32 Score=242.13 Aligned_cols=302 Identities=21% Similarity=0.370 Sum_probs=231.1
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCC-CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGD-KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D-~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
.+++.|.--...|..++|+.. |..+|-|+.. |++-||++.+..-+ .++ ..|-..+++++++|||+++|
T Consensus 298 ~lih~LSis~~~I~t~~~N~t------GDWiA~g~~klgQLlVweWqsEsYV--lKQ---QgH~~~i~~l~YSpDgq~ia 366 (893)
T KOG0291|consen 298 NLIHSLSISDQKILTVSFNST------GDWIAFGCSKLGQLLVWEWQSESYV--LKQ---QGHSDRITSLAYSPDGQLIA 366 (893)
T ss_pred eEEEEeecccceeeEEEeccc------CCEEEEcCCccceEEEEEeecccee--eec---cccccceeeEEECCCCcEEE
Confidence 555666555667888888875 5677777654 89999999865321 121 35888999999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecC-ccCeeEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH-AQDVKMV 169 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h-~~~v~~~ 169 (352)
+|+.||+|++||...+ -|..++..|++.|+.+.|+..|+.+++++-||+|+.||+...+. .+++... ..+..|+
T Consensus 367 TG~eDgKVKvWn~~Sg--fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrN---fRTft~P~p~Qfscv 441 (893)
T KOG0291|consen 367 TGAEDGKVKVWNTQSG--FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRN---FRTFTSPEPIQFSCV 441 (893)
T ss_pred eccCCCcEEEEeccCc--eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccce---eeeecCCCceeeeEE
Confidence 9999999999998765 57889999999999999999999999999999999999976654 3444332 2356788
Q ss_pred EEcCCCCEEEEEeCCC-cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccc
Q 018675 170 QWHPTMDVLFSCSYDN-TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (352)
+..|.+..+.+|+.|. .|.+|.+... .+.....||+++|.+|+|+|++..|+|++.|.+||+|++-.
T Consensus 442 avD~sGelV~AG~~d~F~IfvWS~qTG---------qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~--- 509 (893)
T KOG0291|consen 442 AVDPSGELVCAGAQDSFEIFVWSVQTG---------QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFS--- 509 (893)
T ss_pred EEcCCCCEEEeeccceEEEEEEEeecC---------eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeec---
Confidence 8999999999999887 6999976543 23345679999999999999999999999999999998631
Q ss_pred ccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCcccc----------Cc-ccceeeecccc
Q 018675 249 QSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLID----------GP-SYKMLLKKEKA 316 (352)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~----------~~-~~~~~~~~~~~ 316 (352)
.+....++. ....+..+++.|+| .++.+..||.+.+|+........ +. ....+..+...
T Consensus 510 -------s~~~vEtl~--i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa 580 (893)
T KOG0291|consen 510 -------SSGTVETLE--IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSA 580 (893)
T ss_pred -------cCceeeeEe--eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcc
Confidence 112222222 23457788999987 79999999999999876432221 10 11222233344
Q ss_pred cCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 317 HDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 317 h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.....+.+.+|+||. .+++||..+.|.||++..+
T Consensus 581 ~~K~Ftti~ySaDG~-~IlAgG~sn~iCiY~v~~~ 614 (893)
T KOG0291|consen 581 KGKTFTTICYSADGK-CILAGGESNSICIYDVPEG 614 (893)
T ss_pred cCCceEEEEEcCCCC-EEEecCCcccEEEEECchh
Confidence 557899999999997 5668999999999999764
No 28
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=1.2e-34 Score=236.67 Aligned_cols=291 Identities=26% Similarity=0.439 Sum_probs=223.0
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
.+..-....+.|+|+.+.. ..++||+.|++|++||..+.. +...+ ..|+++|.|+.|. .+.|++|
T Consensus 189 rinc~Se~skgVYClQYDD--------~kiVSGlrDnTikiWD~n~~~----c~~~L-~GHtGSVLCLqyd--~rviisG 253 (499)
T KOG0281|consen 189 RINCRSENSKGVYCLQYDD--------EKIVSGLRDNTIKIWDKNSLE----CLKIL-TGHTGSVLCLQYD--ERVIVSG 253 (499)
T ss_pred eecCCcccCCceEEEEecc--------hhhhcccccCceEEeccccHH----HHHhh-hcCCCcEEeeecc--ceEEEec
Confidence 3333334678999998754 468999999999999987643 22222 4699999999886 4699999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
+.|.++++||..++ +++.++-+|.++|..+.|+. .++++++.|.++.+||+.......+.+.+.||-..|+.++|+
T Consensus 254 SSDsTvrvWDv~tg--e~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd 329 (499)
T KOG0281|consen 254 SSDSTVRVWDVNTG--EPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 329 (499)
T ss_pred CCCceEEEEeccCC--chhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc
Confidence 99999999999887 46778889999999999975 689999999999999997655444556788999999999995
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCC
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (352)
.++++++|.|++|++|++.. ..++.++ .||.-.|.++.+. ++++++|+.|.+|++||+.-.....
T Consensus 330 --~kyIVsASgDRTikvW~~st-----~efvRtl----~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~cLR-- 394 (499)
T KOG0281|consen 330 --DKYIVSASGDRTIKVWSTST-----CEFVRTL----NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR-- 394 (499)
T ss_pred --cceEEEecCCceEEEEeccc-----eeeehhh----hcccccceehhcc--CeEEEecCCCceEEEEeccccHHHH--
Confidence 45999999999999996543 2344443 5899999998874 8899999999999999976432110
Q ss_pred CCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcc
Q 018675 253 GYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR 332 (352)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~ 332 (352)
+...|+.-+.++.|+ +..+++|+.||+|++|+.........+.....+.....|++.|..+.|. ..+
T Consensus 395 ----------vLeGHEeLvRciRFd-~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fq 461 (499)
T KOG0281|consen 395 ----------VLEGHEELVRCIRFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQ 461 (499)
T ss_pred ----------HHhchHHhhhheeec-CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec--ceE
Confidence 011355556677764 4678999999999999765433222223333445667899999999995 444
Q ss_pred eEEEecCCCeEEEEeeccC
Q 018675 333 LLASASDDGMIKIWELANT 351 (352)
Q Consensus 333 ~l~s~~~Dg~i~iw~~~~~ 351 (352)
+++++.|.+|.|||+.+.
T Consensus 462 -IvsssHddtILiWdFl~~ 479 (499)
T KOG0281|consen 462 -IISSSHDDTILIWDFLNG 479 (499)
T ss_pred -EEeccCCCeEEEEEcCCC
Confidence 678999999999998654
No 29
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=5.4e-33 Score=246.66 Aligned_cols=293 Identities=25% Similarity=0.410 Sum_probs=233.3
Q ss_pred eeeeeecCCccceEEEEEc-cCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 12 REIQTLEGHTDRVWSLAWK-PTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~-p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+....+.|..+.|.+|.|- |. ..++|.+++.+.+|+|+..+... .+...|+..|.++....+|-+|+
T Consensus 314 ~i~k~ivG~ndEI~Dm~~lG~e------~~~laVATNs~~lr~y~~~~~~c------~ii~GH~e~vlSL~~~~~g~lla 381 (775)
T KOG0319|consen 314 TIVKQIVGYNDEILDMKFLGPE------ESHLAVATNSPELRLYTLPTSYC------QIIPGHTEAVLSLDVWSSGDLLA 381 (775)
T ss_pred EEehhhcCCchhheeeeecCCc------cceEEEEeCCCceEEEecCCCce------EEEeCchhheeeeeecccCcEEE
Confidence 4556677999999999984 44 36899999999999998776532 24467999999999666789999
Q ss_pred EEeCCCcEEEEEccC--CceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEE--E----EEeec
Q 018675 91 TASFDATTCIWEDVG--GDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFEC--V----SVLQG 161 (352)
Q Consensus 91 s~~~d~~i~i~~~~~--~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~--~----~~~~~ 161 (352)
||+.|.++++|.... ....++....+|+..|.+++++..+ .+|+++|.|+++++|+++..++... . .....
T Consensus 382 t~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~a 461 (775)
T KOG0319|consen 382 TGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERA 461 (775)
T ss_pred EecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHh
Confidence 999999999997632 2233455667999999999997654 5899999999999999875322111 1 13347
Q ss_pred CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 162 h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
|...|++++.+|+..++++||.|.+.+||++++. ... ....||...|+++.|+|..+.++|++.|.+||||
T Consensus 462 HdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~-----~l~----~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW 532 (775)
T KOG0319|consen 462 HDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQL-----RLL----GVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIW 532 (775)
T ss_pred hcccccceEecCCCceEEecccccceeeecccCc-----eEE----EEeeCCccceEEEEeccccceeEeccCCceEEEE
Confidence 9999999999999999999999999999987632 223 3345899999999999999999999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcc
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 320 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 320 (352)
.+... .=+.++. .|...+....|-.++ .++++++||.+++|..+.. .+...+.+|+..
T Consensus 533 ~is~f-----------SClkT~e-GH~~aVlra~F~~~~~qliS~~adGliKlWnikt~---------eC~~tlD~H~Dr 591 (775)
T KOG0319|consen 533 SISTF-----------SCLKTFE-GHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTN---------ECEMTLDAHNDR 591 (775)
T ss_pred Eeccc-----------eeeeeec-CccceeEeeeeeeCCcEEEeccCCCcEEEEeccch---------hhhhhhhhccce
Confidence 87532 1122333 367778888777755 8999999999999976543 344567899999
Q ss_pred eeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 321 VNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 321 i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
|.+++-+|.+. +++|||.||.|.+|.
T Consensus 592 vWaL~~~~~~~-~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 592 VWALSVSPLLD-MFVTGGGDGRIIFWK 617 (775)
T ss_pred eEEEeecCccc-eeEecCCCeEEEEee
Confidence 99999999876 889999999999996
No 30
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=6.4e-33 Score=246.21 Aligned_cols=310 Identities=27% Similarity=0.406 Sum_probs=234.7
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
-++..|+||-+.|+++.|+|..+ ...|++|+.|+++++||+.+... +.. ....|...|++++|++|+..+++
T Consensus 138 ~~th~fkG~gGvVssl~F~~~~~----~~lL~sg~~D~~v~vwnl~~~~t---cl~-~~~~H~S~vtsL~~~~d~~~~ls 209 (775)
T KOG0319|consen 138 YCTHSFKGHGGVVSSLLFHPHWN----RWLLASGATDGTVRVWNLNDKRT---CLH-TMILHKSAVTSLAFSEDSLELLS 209 (775)
T ss_pred EEEEEecCCCceEEEEEeCCccc----hhheeecCCCceEEEEEcccCch---HHH-HHHhhhhheeeeeeccCCceEEE
Confidence 45678999999999999999754 46899999999999999985432 221 22458888999999988888888
Q ss_pred EeCCCcEEEEEccCCc--------------------------ee------------------------------------
Q 018675 92 ASFDATTCIWEDVGGD--------------------------YE------------------------------------ 109 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~--------------------------~~------------------------------------ 109 (352)
++.|..+.+||....+ +.
T Consensus 210 ~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~ 289 (775)
T KOG0319|consen 210 VGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLA 289 (775)
T ss_pred eccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhccee
Confidence 8888777777631100 00
Q ss_pred -------------------------------------------------------------------eeEeeccccCCee
Q 018675 110 -------------------------------------------------------------------CVATLEGHENEVK 122 (352)
Q Consensus 110 -------------------------------------------------------------------~~~~~~~h~~~v~ 122 (352)
.-..+.||+..|.
T Consensus 290 ~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vl 369 (775)
T KOG0319|consen 290 IESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVL 369 (775)
T ss_pred ccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhhee
Confidence 0012346888888
Q ss_pred EEEECCCCcEEEEeeCCCcEEEEecCCC-CeeEEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCc
Q 018675 123 SVSWNASGTLLATCGRDKSVWIWEVMPG-NEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNW 200 (352)
Q Consensus 123 ~v~~~~~~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~ 200 (352)
+++...+|.+|+|||.|+++++|.+... ....++....+|+..|.+++++..+ .+|+++|.|+++++|.+........
T Consensus 370 SL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~ 449 (775)
T KOG0319|consen 370 SLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAF 449 (775)
T ss_pred eeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccc
Confidence 8885556789999999999999998332 2334455677899999999996543 5899999999999998766211111
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE- 279 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 279 (352)
..........-.|...|++++++|+..+++|||.|.+.+||+++. ......+. .|...++++.|++.
T Consensus 450 ~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~-----------~~l~~vLs-GH~RGvw~V~Fs~~d 517 (775)
T KOG0319|consen 450 PIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ-----------LRLLGVLS-GHTRGVWCVSFSKND 517 (775)
T ss_pred cceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC-----------ceEEEEee-CCccceEEEEecccc
Confidence 111111112247999999999999999999999999999998752 12334444 47888999999995
Q ss_pred ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 280 GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 280 ~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
..++++|.|+++++|.... ..+++++.||...|..++|-.++++ |+|++.||.||||++.+.
T Consensus 518 q~laT~SgD~TvKIW~is~---------fSClkT~eGH~~aVlra~F~~~~~q-liS~~adGliKlWnikt~ 579 (775)
T KOG0319|consen 518 QLLATCSGDKTVKIWSIST---------FSCLKTFEGHTSAVLRASFIRNGKQ-LISAGADGLIKLWNIKTN 579 (775)
T ss_pred ceeEeccCCceEEEEEecc---------ceeeeeecCccceeEeeeeeeCCcE-EEeccCCCcEEEEeccch
Confidence 5899999999999997653 2456778999999999999988876 679999999999999753
No 31
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=7.5e-34 Score=236.32 Aligned_cols=258 Identities=25% Similarity=0.458 Sum_probs=210.4
Q ss_pred ccCCccceeeeee------ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecce
Q 018675 4 LDDGNYELREIQT------LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77 (352)
Q Consensus 4 ~~~~~~~~~~~~~------~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v 77 (352)
...|+|.+..... ++.|...|.++.|+++ +..++||..||.|++|+..... ...+...|...|
T Consensus 115 s~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~------g~wmiSgD~gG~iKyWqpnmnn-----Vk~~~ahh~eaI 183 (464)
T KOG0284|consen 115 SQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHN------GTWMISGDKGGMIKYWQPNMNN-----VKIIQAHHAEAI 183 (464)
T ss_pred cccccEEEecCceeeHHHHhhhhcccceeEEEccC------CCEEEEcCCCceEEecccchhh-----hHHhhHhhhhhh
Confidence 4567777655543 4589999999999997 5799999999999999876432 223334566899
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE
Q 018675 78 RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 157 (352)
++++|+|+...+++++.||+|+|||...... ...+.+|.-.|++++|+|...+++++|.|+.|++||.+++ .|+.
T Consensus 184 RdlafSpnDskF~t~SdDg~ikiWdf~~~ke--e~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg---~cl~ 258 (464)
T KOG0284|consen 184 RDLAFSPNDSKFLTCSDDGTIKIWDFRMPKE--ERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG---SCLA 258 (464)
T ss_pred heeccCCCCceeEEecCCCeEEEEeccCCch--hheeccCCCCcceeccCCccceeEEccCCceeEeecCCCc---chhh
Confidence 9999999999999999999999999765432 3356899999999999999999999999999999998765 4778
Q ss_pred EeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCC
Q 018675 158 VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDL 236 (352)
Q Consensus 158 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg 236 (352)
++.+|...|+.+.|.|++++|+++|.|..++++|++. .. .+ ....+|...|+++.|+|- ..+|.+|+.||
T Consensus 259 tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~-mk-------El-~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dg 329 (464)
T KOG0284|consen 259 TLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRT-MK-------EL-FTYRGHKKDVTSLTWHPLNESLFTSGGSDG 329 (464)
T ss_pred hhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhH-hH-------HH-HHhhcchhhheeeccccccccceeeccCCC
Confidence 8899999999999999999999999999999998762 11 11 123479999999999995 56788999999
Q ss_pred cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEcc
Q 018675 237 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES 297 (352)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~ 297 (352)
.|..|.+...+. +..+...|+..|++++|.|=| ++++|+.|.++++|...
T Consensus 330 svvh~~v~~~~p-----------~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 330 SVVHWVVGLEEP-----------LGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred ceEEEecccccc-----------ccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 999998753322 222334588999999999965 78899999999999654
No 32
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.7e-31 Score=226.00 Aligned_cols=279 Identities=26% Similarity=0.497 Sum_probs=221.3
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~ 101 (352)
..|++++|+.+ +.+||+|+.||.+|+|+...... ..+ ..|+++|.++.|+..|.+|++++.|+++.+|
T Consensus 236 kdVT~L~Wn~~------G~~LatG~~~G~~riw~~~G~l~-----~tl-~~HkgPI~slKWnk~G~yilS~~vD~ttilw 303 (524)
T KOG0273|consen 236 KDVTSLDWNND------GTLLATGSEDGEARIWNKDGNLI-----STL-GQHKGPIFSLKWNKKGTYILSGGVDGTTILW 303 (524)
T ss_pred CCcceEEecCC------CCeEEEeecCcEEEEEecCchhh-----hhh-hccCCceEEEEEcCCCCEEEeccCCccEEEE
Confidence 58999999986 67999999999999999765421 111 4589999999999999999999999999999
Q ss_pred EccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEE
Q 018675 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181 (352)
Q Consensus 102 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 181 (352)
|..+++... .+.-|..+--.|.|-.+ ..|++++.|+.|.|+.+.... ++.++.+|..+|.++.|.|++.+|+++
T Consensus 304 d~~~g~~~q--~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~---P~~t~~GH~g~V~alk~n~tg~LLaS~ 377 (524)
T KOG0273|consen 304 DAHTGTVKQ--QFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDR---PVKTFIGHHGEVNALKWNPTGSLLASC 377 (524)
T ss_pred eccCceEEE--eeeeccCCccceEEecC-ceEeecCCCceEEEEEecCCC---cceeeecccCceEEEEECCCCceEEEe
Confidence 988876543 44456666577888654 568999999999999985443 466788999999999999999999999
Q ss_pred eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC---------CEEEEEeCCCcEEEEcCCccccccCC
Q 018675 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG---------DKLVSCSDDLTIKIWGADITRMQSGD 252 (352)
Q Consensus 182 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~---------~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (352)
|.|++++||...... +.. .+.+|...|..+.|+|+| ..+++++.|++|++||+...
T Consensus 378 SdD~TlkiWs~~~~~-----~~~----~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~g------ 442 (524)
T KOG0273|consen 378 SDDGTLKIWSMGQSN-----SVH----DLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESG------ 442 (524)
T ss_pred cCCCeeEeeecCCCc-----chh----hhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCC------
Confidence 999999999755432 122 234789999999999965 46999999999999997532
Q ss_pred CCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 253 GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
.+++.+. .|..++++++++|++ ++|+|+.||.+.+|...... +.+.. .-++.|..+.|+.+|.
T Consensus 443 -----v~i~~f~-kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~---------l~~s~-~~~~~Ifel~Wn~~G~ 506 (524)
T KOG0273|consen 443 -----VPIHTLM-KHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGK---------LVKSY-QGTGGIFELCWNAAGD 506 (524)
T ss_pred -----ceeEeec-cCCCceEEEEecCCCcEEEecCCCCeeEeccccchh---------eeEee-cCCCeEEEEEEcCCCC
Confidence 2344443 478899999999987 89999999999999654322 22223 3445699999999997
Q ss_pred ceEEEecCCCeEEEEeecc
Q 018675 332 RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 332 ~~l~s~~~Dg~i~iw~~~~ 350 (352)
+ |..+..|+.+.+-|+++
T Consensus 507 k-l~~~~sd~~vcvldlr~ 524 (524)
T KOG0273|consen 507 K-LGACASDGSVCVLDLRK 524 (524)
T ss_pred E-EEEEecCCCceEEEecC
Confidence 5 55677799999988763
No 33
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=9.4e-31 Score=232.99 Aligned_cols=300 Identities=23% Similarity=0.369 Sum_probs=222.8
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
....++.||.+.|.++.|+.+ ..+|++||.|.++|+|..+..+.+.. ..+ ..|+.+|.++-|..+...+.+
T Consensus 136 vl~r~~~g~fddi~si~Ws~D------Sr~l~~gsrD~s~rl~~v~~~k~~~~--~~l-~gHkd~VvacfF~~~~~~l~t 206 (893)
T KOG0291|consen 136 VLHRTYLGHFDDITSIDWSDD------SRLLVTGSRDLSARLFGVDGNKNLFT--YAL-NGHKDYVVACFFGANSLDLYT 206 (893)
T ss_pred eEeeeecCCccceeEEEeccC------CceEEeccccceEEEEEeccccccce--Eec-cCCCcceEEEEeccCcceEEE
Confidence 555678899999999999987 36899999999999999876554221 122 459999999999999999999
Q ss_pred EeCCCcEEEEEccC-----------------------Ccee----e-----eEeeccccCCeeEEEECCCCcEEEEeeCC
Q 018675 92 ASFDATTCIWEDVG-----------------------GDYE----C-----VATLEGHENEVKSVSWNASGTLLATCGRD 139 (352)
Q Consensus 92 ~~~d~~i~i~~~~~-----------------------~~~~----~-----~~~~~~h~~~v~~v~~~~~~~~l~s~~~d 139 (352)
.+.||.+.+|.... ++.. . ..-+......|++.+|++..+.|+++-..
T Consensus 207 vskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFss 286 (893)
T KOG0291|consen 207 VSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSS 286 (893)
T ss_pred EecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecC
Confidence 99999999997540 0000 0 01112223567777777776777777666
Q ss_pred CcEEEEecCCCCee----------------------------------------EEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 140 KSVWIWEVMPGNEF----------------------------------------ECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 140 ~~v~vwd~~~~~~~----------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
|...+++++...-. .-+...++|...+++++++||+++++
T Consensus 287 G~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~ia 366 (893)
T KOG0291|consen 287 GEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIA 366 (893)
T ss_pred CeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEE
Confidence 66666655311100 01234568999999999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCcccee
Q 018675 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRH 259 (352)
Q Consensus 180 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (352)
+|++|+.|++|+.... .|..++. .|++.|+.++|+..|+.+++.+-||+||.||+...+ .
T Consensus 367 TG~eDgKVKvWn~~Sg-----fC~vTFt----eHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYr-----------N 426 (893)
T KOG0291|consen 367 TGAEDGKVKVWNTQSG-----FCFVTFT----EHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYR-----------N 426 (893)
T ss_pred eccCCCcEEEEeccCc-----eEEEEec----cCCCceEEEEEEecCCEEEEeecCCeEEeeeecccc-----------e
Confidence 9999999999975443 5777765 589999999999999999999999999999986322 1
Q ss_pred eEEeecccCcceEEEEecCCc-eEEecCCCC-eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEe
Q 018675 260 LCTISGYHDRTIFSVHWSREG-IIASGAADD-SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA 337 (352)
Q Consensus 260 ~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~-~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~ 337 (352)
..++.........+++.+|+| .+.+|+.|. .|.+|+...+. ++-.+.||.++|.+++|+|.+. +|+|+
T Consensus 427 fRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGq---------llDiLsGHEgPVs~l~f~~~~~-~LaS~ 496 (893)
T KOG0291|consen 427 FRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQ---------LLDILSGHEGPVSGLSFSPDGS-LLASG 496 (893)
T ss_pred eeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCe---------eeehhcCCCCcceeeEEccccC-eEEec
Confidence 222333334445677888877 455555565 57888664432 3345689999999999999986 89999
Q ss_pred cCCCeEEEEeecc
Q 018675 338 SDDGMIKIWELAN 350 (352)
Q Consensus 338 ~~Dg~i~iw~~~~ 350 (352)
|+|++||+|++-.
T Consensus 497 SWDkTVRiW~if~ 509 (893)
T KOG0291|consen 497 SWDKTVRIWDIFS 509 (893)
T ss_pred cccceEEEEEeec
Confidence 9999999999853
No 34
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=7.7e-32 Score=210.95 Aligned_cols=236 Identities=21% Similarity=0.366 Sum_probs=191.4
Q ss_pred CEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 87 KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 87 ~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
-+|++++.|.+|++|...+| .|..+++..++.|+.+...|++..|++++. ..|++||+.+.++. ++..+.+|..+|
T Consensus 11 viLvsA~YDhTIRfWqa~tG--~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~-Pv~t~e~h~kNV 86 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTG--ICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPN-PVATFEGHTKNV 86 (311)
T ss_pred eEEEeccCcceeeeeehhcC--eEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCC-ceeEEeccCCce
Confidence 47899999999999998887 678888877789999999999999988876 56999999877654 678899999999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
+.+.|..+++.+++||+||+++|||++.. .+... ..|.++|+++..+|+...|++|..+|.|++||+...
T Consensus 87 taVgF~~dgrWMyTgseDgt~kIWdlR~~-----~~qR~-----~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 87 TAVGFQCDGRWMYTGSEDGTVKIWDLRSL-----SCQRN-----YQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred EEEEEeecCeEEEecCCCceEEEEeccCc-----ccchh-----ccCCCCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence 99999999999999999999999987652 22222 246789999999999999999999999999998532
Q ss_pred ccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEE
Q 018675 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325 (352)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 325 (352)
... +.+.+.....+.++...+++ +++++...|..++|...... ....-+.+.+++.|++.|+.+.
T Consensus 157 ~c~-----------~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~---~~s~l~P~~k~~ah~~~il~C~ 222 (311)
T KOG0315|consen 157 SCT-----------HELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQ---TASELEPVHKFQAHNGHILRCL 222 (311)
T ss_pred ccc-----------cccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCC---ccccceEhhheecccceEEEEE
Confidence 110 11122234567888888876 78888889999999765421 1222334556789999999999
Q ss_pred ecCCCcceEEEecCCCeEEEEeeccC
Q 018675 326 WSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 326 ~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+|||++ +|||+|.|++++||+++..
T Consensus 223 lSPd~k-~lat~ssdktv~iwn~~~~ 247 (311)
T KOG0315|consen 223 LSPDVK-YLATCSSDKTVKIWNTDDF 247 (311)
T ss_pred ECCCCc-EEEeecCCceEEEEecCCc
Confidence 999986 7899999999999998764
No 35
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=1.3e-31 Score=221.11 Aligned_cols=287 Identities=29% Similarity=0.416 Sum_probs=218.4
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC---CCCEEEEEeCC
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP---SGKLLATASFD 95 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~~~d 95 (352)
-|.+.|.++.-.+ +.++||+.||.+|+|+..... .. ....|.++|.+++|-- ....+++++.|
T Consensus 103 ~hdDWVSsv~~~~--------~~IltgsYDg~~riWd~~Gk~-----~~-~~~Ght~~ik~v~~v~~n~~~~~fvsas~D 168 (423)
T KOG0313|consen 103 LHDDWVSSVKGAS--------KWILTGSYDGTSRIWDLKGKS-----IK-TIVGHTGPIKSVAWVIKNSSSCLFVSASMD 168 (423)
T ss_pred cchhhhhhhcccC--------ceEEEeecCCeeEEEecCCce-----EE-EEecCCcceeeeEEEecCCccceEEEecCC
Confidence 3778887776543 689999999999999986532 12 2245999999888743 23469999999
Q ss_pred CcEEEEEccCCcee--eeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC----------------------C
Q 018675 96 ATTCIWEDVGGDYE--CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG----------------------N 151 (352)
Q Consensus 96 ~~i~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~----------------------~ 151 (352)
.++++|....++.. ......||...|-+++..++|..+++|+.|.++++|+.... .
T Consensus 169 qtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~ 248 (423)
T KOG0313|consen 169 QTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGG 248 (423)
T ss_pred ceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhccc
Confidence 99999976554332 22333599999999999999999999999999999993211 0
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
...++..+.+|..+|.++.|.+ ...+++++.|.+|+.||+..... ..++. ....+++++++|...+|++
T Consensus 249 ~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~-----~~~~~-----~~ksl~~i~~~~~~~Ll~~ 317 (423)
T KOG0313|consen 249 TRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGL-----KSTLT-----TNKSLNCISYSPLSKLLAS 317 (423)
T ss_pred ccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccc-----eeeee-----cCcceeEeecccccceeee
Confidence 1224567889999999999987 56789999999999999875432 12221 2467899999999999999
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccce
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
|+.|..+++||.+...- . -....+. .|.+.+.++.|+|.. ++++++.|+++++|+... .+.
T Consensus 318 gssdr~irl~DPR~~~g-------s-~v~~s~~-gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS--------~k~ 380 (423)
T KOG0313|consen 318 GSSDRHIRLWDPRTGDG-------S-VVSQSLI-GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS--------TKA 380 (423)
T ss_pred cCCCCceeecCCCCCCC-------c-eeEEeee-cchhhhhheecCCCCceEEEEEecCCeEEEEEecc--------CCC
Confidence 99999999999764310 0 1112233 477789999999965 899999999999997643 122
Q ss_pred eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.+....+|...|.++.|+.. .+++|||.|++|+|++-.
T Consensus 381 plydI~~h~DKvl~vdW~~~--~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 381 PLYDIAGHNDKVLSVDWNEG--GLIVSGGADNKLRIFKGS 418 (423)
T ss_pred cceeeccCCceEEEEeccCC--ceEEeccCcceEEEeccc
Confidence 34566899999999999853 368999999999998754
No 36
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-32 Score=214.29 Aligned_cols=254 Identities=22% Similarity=0.455 Sum_probs=200.2
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-CCCEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLL 89 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l 89 (352)
+.+...+. -.+.++.++|++.. ..++++|+.||++||||...+.. +...+ +.|...|.++.|++ +.+.+
T Consensus 51 i~e~~s~d-~~D~LfdV~Wse~~-----e~~~~~a~GDGSLrl~d~~~~s~---Pi~~~-kEH~~EV~Svdwn~~~r~~~ 120 (311)
T KOG0277|consen 51 IQECQSYD-TEDGLFDVAWSENH-----ENQVIAASGDGSLRLFDLTMPSK---PIHKF-KEHKREVYSVDWNTVRRRIF 120 (311)
T ss_pred eEEEEeee-cccceeEeeecCCC-----cceEEEEecCceEEEeccCCCCc---chhHH-HhhhhheEEeccccccceeE
Confidence 34444443 46789999999974 46899999999999999654432 22222 45999999999998 45678
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
+++++|++|++|+.... ..+.++.+|+.-|....|+| .+++|+++|.|+++++||++..... + .+..|..++.+
T Consensus 121 ltsSWD~TiKLW~~~r~--~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~--~-~i~ah~~Eil~ 195 (311)
T KOG0277|consen 121 LTSSWDGTIKLWDPNRP--NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKF--M-SIEAHNSEILC 195 (311)
T ss_pred EeeccCCceEeecCCCC--cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCce--e-EEEeccceeEe
Confidence 89999999999987654 45778999999999999999 6789999999999999999765432 2 26778899999
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCcc
Q 018675 169 VQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 169 ~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~~ 246 (352)
+.|+. +..++++|+.|+.|++||++.-. +.....++|+-.|..+.|||. ...||+++-|-++||||....
T Consensus 196 cdw~ky~~~vl~Tg~vd~~vr~wDir~~r--------~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ 267 (311)
T KOG0277|consen 196 CDWSKYNHNVLATGGVDNLVRGWDIRNLR--------TPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQ 267 (311)
T ss_pred ecccccCCcEEEecCCCceEEEEehhhcc--------ccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccc
Confidence 99985 66789999999999999987542 122344699999999999996 567889999999999975311
Q ss_pred ccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
. ..+++..-|+.-+..+.|
T Consensus 268 d-------------------------------------------------------------s~~e~~~~HtEFv~g~Dw 286 (311)
T KOG0277|consen 268 D-------------------------------------------------------------SAIETVDHHTEFVCGLDW 286 (311)
T ss_pred h-------------------------------------------------------------hhhhhhhccceEEecccc
Confidence 0 011223457888999999
Q ss_pred cCCCcceEEEecCCCeEEEEee
Q 018675 327 SPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
|+-....+|++|.|+.+.||+.
T Consensus 287 s~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 287 SLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ccccCceeeecccccceeeecc
Confidence 9876667999999999999985
No 37
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.8e-32 Score=242.91 Aligned_cols=299 Identities=22% Similarity=0.390 Sum_probs=235.6
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 94 (352)
..++.-+.+|-+++|||.+ |.++++--.|.|++||...+.-+ ..+ ..|.++|+.+.|+|++.++++|+.
T Consensus 3 tkfEskSsRvKglsFHP~r------PwILtslHsG~IQlWDYRM~tli----~rF-deHdGpVRgv~FH~~qplFVSGGD 71 (1202)
T KOG0292|consen 3 TKFESKSSRVKGLSFHPKR------PWILTSLHSGVIQLWDYRMGTLI----DRF-DEHDGPVRGVDFHPTQPLFVSGGD 71 (1202)
T ss_pred chhhcccccccceecCCCC------CEEEEeecCceeeeehhhhhhHH----hhh-hccCCccceeeecCCCCeEEecCC
Confidence 4456677889999999984 78999999999999998765321 112 359999999999999999999999
Q ss_pred CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
|-+|++|+..+. .++.++.||-.-|+.+.|++.-.+++++|+|.||++|+-++. .++..+.||..-|+|.+|+|+
T Consensus 72 DykIkVWnYk~r--rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr---~~iavltGHnHYVMcAqFhpt 146 (1202)
T KOG0292|consen 72 DYKIKVWNYKTR--RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSR---KCIAVLTGHNHYVMCAQFHPT 146 (1202)
T ss_pred ccEEEEEecccc--eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCC---ceEEEEecCceEEEeeccCCc
Confidence 999999998654 678899999999999999999999999999999999998654 578889999999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeE--------------------eeeeccCCCCcccEEEEEEcCCCCEEEEEeC
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCV--------------------QTISESNNGHSSTIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~--------------------~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~ 234 (352)
+..++++|-|.+|++||+..-...+.... .-......||.-.|+-++|+|.-.+++||++
T Consensus 147 EDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~D 226 (1202)
T KOG0292|consen 147 EDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGAD 226 (1202)
T ss_pred cceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCC
Confidence 99999999999999999865322211100 0011234589999999999999999999999
Q ss_pred CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeec
Q 018675 235 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313 (352)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
|..||+|-++.. +.|.--.+ -.|.+.+.++-|.|. ..+++.+.|+++++|+..+. ..++.
T Consensus 227 DRqVKlWrmnet--------KaWEvDtc--rgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kR---------t~v~t 287 (1202)
T KOG0292|consen 227 DRQVKLWRMNET--------KAWEVDTC--RGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKR---------TSVQT 287 (1202)
T ss_pred cceeeEEEeccc--------cceeehhh--hcccCCcceEEecCccceeEecCCCccEEEEecccc---------cceee
Confidence 999999965421 22321111 136778888888884 58999999999999976542 12233
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
...-+++-..++-+|.. +++ .+|.|+-+.||.+++
T Consensus 288 frrendRFW~laahP~l-NLf-AAgHDsGm~VFkleR 322 (1202)
T KOG0292|consen 288 FRRENDRFWILAAHPEL-NLF-AAGHDSGMIVFKLER 322 (1202)
T ss_pred eeccCCeEEEEEecCCc-cee-eeecCCceEEEEEcc
Confidence 33344678888889976 466 477888888988864
No 38
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=1.8e-31 Score=220.35 Aligned_cols=259 Identities=29% Similarity=0.501 Sum_probs=202.6
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
+.+.++.||.+.|.+++|.-.+.. ...|+++|.|+++++|.++.+....++.. ....|.++|-+++..++|.++++
T Consensus 135 k~~~~~~Ght~~ik~v~~v~~n~~---~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~-~~~GHk~~V~sVsv~~sgtr~~S 210 (423)
T KOG0313|consen 135 KSIKTIVGHTGPIKSVAWVIKNSS---SCLFVSASMDQTLRLWKWNVGENKVKALK-VCRGHKRSVDSVSVDSSGTRFCS 210 (423)
T ss_pred ceEEEEecCCcceeeeEEEecCCc---cceEEEecCCceEEEEEecCchhhhhHHh-HhcccccceeEEEecCCCCeEEe
Confidence 566788999999998888653211 24799999999999999876543222211 22379999999999999999999
Q ss_pred EeCCCcEEEEEccC-----------------------CceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC
Q 018675 92 ASFDATTCIWEDVG-----------------------GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 92 ~~~d~~i~i~~~~~-----------------------~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~ 148 (352)
|++|.++.+|+..+ +...++.++.+|.++|.++.|++ ...++++|+|.+|+.||+.
T Consensus 211 gS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDle 289 (423)
T KOG0313|consen 211 GSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLE 289 (423)
T ss_pred ecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEee
Confidence 99999999998221 11234667899999999999988 6789999999999999997
Q ss_pred CCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 149 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
.++. +..+.+ ...+.++..+|...+|++|+.|+.+++||.+..+. +. ......+|.+.|.++.|+|...+
T Consensus 290 tg~~---~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~g-s~-----v~~s~~gH~nwVssvkwsp~~~~ 359 (423)
T KOG0313|consen 290 TGGL---KSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDG-SV-----VSQSLIGHKNWVSSVKWSPTNEF 359 (423)
T ss_pred cccc---eeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCC-ce-----eEEeeecchhhhhheecCCCCce
Confidence 7653 223332 34688999999999999999999999998766432 11 12234589999999999997654
Q ss_pred -EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEc
Q 018675 229 -LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 296 (352)
Q Consensus 229 -l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~ 296 (352)
|++++.|+++++||++..+ .++..+. .|...++++.|.....+++|+.|++++++..
T Consensus 360 ~~~S~S~D~t~klWDvRS~k----------~plydI~-~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 360 QLVSGSYDNTVKLWDVRSTK----------APLYDIA-GHNDKVLSVDWNEGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred EEEEEecCCeEEEEEeccCC----------Ccceeec-cCCceEEEEeccCCceEEeccCcceEEEecc
Confidence 7799999999999987432 2344443 3677899999999999999999999999843
No 39
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=1.8e-31 Score=218.79 Aligned_cols=243 Identities=26% Similarity=0.433 Sum_probs=201.3
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
..|.+-|+|+++.|..+.+++|+.|++++|||..++. +..++.||-+.|+.+++++-..++++++.|+.|+.||+...
T Consensus 148 ~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~--LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~n 225 (460)
T KOG0285|consen 148 SGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ--LKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYN 225 (460)
T ss_pred hhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe--EEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhh
Confidence 4699999999999999999999999999999999884 56788999999999999999999999999999999998643
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
+.++.+.+|-..|.|++.+|+.+.|++|+.|..+++||++...+ +.. ..||..+|.++.+.|....++
T Consensus 226 ---kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~-----V~~----l~GH~~~V~~V~~~~~dpqvi 293 (460)
T KOG0285|consen 226 ---KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRAS-----VHV----LSGHTNPVASVMCQPTDPQVI 293 (460)
T ss_pred ---hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccce-----EEE----ecCCCCcceeEEeecCCCceE
Confidence 35677889999999999999999999999999999998876432 222 348999999999999989999
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCce-EEecCCCCeEEEEEccCCccccCcccce
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
+|+.|++|++||+...+ ..+.+ ..|..++.+++..|... +++++.| .++-|...++ +
T Consensus 294 t~S~D~tvrlWDl~agk-----------t~~tl-t~hkksvral~lhP~e~~fASas~d-nik~w~~p~g---------~ 351 (460)
T KOG0285|consen 294 TGSHDSTVRLWDLRAGK-----------TMITL-THHKKSVRALCLHPKENLFASASPD-NIKQWKLPEG---------E 351 (460)
T ss_pred EecCCceEEEeeeccCc-----------eeEee-ecccceeeEEecCCchhhhhccCCc-cceeccCCcc---------c
Confidence 99999999999986332 22222 24677888999998764 5555555 5666644332 2
Q ss_pred eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.++.+.+|+..|++++.+.|+ ++++|++.|.|..||.+.+
T Consensus 352 f~~nlsgh~~iintl~~nsD~--v~~~G~dng~~~fwdwksg 391 (460)
T KOG0285|consen 352 FLQNLSGHNAIINTLSVNSDG--VLVSGGDNGSIMFWDWKSG 391 (460)
T ss_pred hhhccccccceeeeeeeccCc--eEEEcCCceEEEEEecCcC
Confidence 334467999999999998886 5779999999999998764
No 40
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=2.7e-30 Score=206.69 Aligned_cols=242 Identities=23% Similarity=0.405 Sum_probs=197.8
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc--eeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS--RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~--~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
+..|...+|+|+ ++++|.||-|+...||++.+.. ........+ ..|++.+.||.|-+| ..|+|++.|.+.
T Consensus 97 s~WVMtCA~sPS------g~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l-~gHtgylScC~f~dD-~~ilT~SGD~TC 168 (343)
T KOG0286|consen 97 SSWVMTCAYSPS------GNFVACGGLDNKCSIYPLSTRDAEGNVRVSREL-AGHTGYLSCCRFLDD-NHILTGSGDMTC 168 (343)
T ss_pred ceeEEEEEECCC------CCeEEecCcCceeEEEecccccccccceeeeee-cCccceeEEEEEcCC-CceEecCCCceE
Confidence 457778899997 5799999999999999987552 111112222 469999999999985 567899999999
Q ss_pred EEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
.+||.+++. ....+.+|.+.|.+++++| +++.|++|+-|++.++||++.+ .++..+.+|...|+++.|+|++.-
T Consensus 169 alWDie~g~--~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~---~c~qtF~ghesDINsv~ffP~G~a 243 (343)
T KOG0286|consen 169 ALWDIETGQ--QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG---QCVQTFEGHESDINSVRFFPSGDA 243 (343)
T ss_pred EEEEcccce--EEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc---ceeEeecccccccceEEEccCCCe
Confidence 999998874 4677889999999999999 9999999999999999999866 467889999999999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccc
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASW 257 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (352)
+++|+.|++.++||++...+ +..++ ...-..+|++++|+..|++|.+|..|.++.+||.-..+
T Consensus 244 fatGSDD~tcRlyDlRaD~~-----~a~ys--~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e---------- 306 (343)
T KOG0286|consen 244 FATGSDDATCRLYDLRADQE-----LAVYS--HDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGE---------- 306 (343)
T ss_pred eeecCCCceeEEEeecCCcE-----Eeeec--cCcccCCceeEEEcccccEEEeeecCCceeEeeccccc----------
Confidence 99999999999999876421 11221 11234679999999999999999999999999853211
Q ss_pred eeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEE
Q 018675 258 RHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294 (352)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~ 294 (352)
....+ ..|++.|.++..+|+| .+++|+-|.++++|
T Consensus 307 -~vg~L-~GHeNRvScl~~s~DG~av~TgSWDs~lriW 342 (343)
T KOG0286|consen 307 -RVGVL-AGHENRVSCLGVSPDGMAVATGSWDSTLRIW 342 (343)
T ss_pred -eEEEe-eccCCeeEEEEECCCCcEEEecchhHheeec
Confidence 12223 3589999999999998 58899999999998
No 41
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-30 Score=236.07 Aligned_cols=214 Identities=25% Similarity=0.542 Sum_probs=181.7
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+..|.+|.++|.+++|||. .++|+|||+|-.|++|+....+.+.+. ..|-..|+.+.|++.-..|++
T Consensus 42 tli~rFdeHdGpVRgv~FH~~------qplFVSGGDDykIkVWnYk~rrclftL-----~GHlDYVRt~~FHheyPWIlS 110 (1202)
T KOG0292|consen 42 TLIDRFDEHDGPVRGVDFHPT------QPLFVSGGDDYKIKVWNYKTRRCLFTL-----LGHLDYVRTVFFHHEYPWILS 110 (1202)
T ss_pred hHHhhhhccCCccceeeecCC------CCeEEecCCccEEEEEecccceehhhh-----ccccceeEEeeccCCCceEEE
Confidence 345567899999999999998 489999999999999999876543332 358899999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC--------CCC------------
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM--------PGN------------ 151 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~--------~~~------------ 151 (352)
+|.|.+|+||+..+. .++..+.||+.-|+|..|+|...+++++|-|.+|+|||+. ++.
T Consensus 111 ASDDQTIrIWNwqsr--~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~ 188 (1202)
T KOG0292|consen 111 ASDDQTIRIWNWQSR--KCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNS 188 (1202)
T ss_pred ccCCCeEEEEeccCC--ceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccch
Confidence 999999999999876 5788999999999999999999999999999999999973 110
Q ss_pred ------eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 152 ------EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 152 ------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
.......+.||...|+.++|+|+-..+++|+.|+.|++|.+..+. -|. . ....||.+.|.++-|+|.
T Consensus 189 dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetK--aWE----v-DtcrgH~nnVssvlfhp~ 261 (1202)
T KOG0292|consen 189 DLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK--AWE----V-DTCRGHYNNVSSVLFHPH 261 (1202)
T ss_pred hhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecccc--cee----e-hhhhcccCCcceEEecCc
Confidence 011235678999999999999999999999999999999765432 121 1 244589999999999999
Q ss_pred CCEEEEEeCCCcEEEEcCCc
Q 018675 226 GDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 226 ~~~l~s~~~dg~i~iwd~~~ 245 (352)
.++++|.|.|+.|++||+..
T Consensus 262 q~lIlSnsEDksirVwDm~k 281 (1202)
T KOG0292|consen 262 QDLILSNSEDKSIRVWDMTK 281 (1202)
T ss_pred cceeEecCCCccEEEEeccc
Confidence 99999999999999999863
No 42
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.3e-30 Score=229.41 Aligned_cols=289 Identities=22% Similarity=0.370 Sum_probs=226.0
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 94 (352)
.++.||...|.+++++.+. ..++|| ..+++++|+..+.+.+ ..+ ....+.++.|-|.++++++|..
T Consensus 367 i~~~GHR~dVRsl~vS~d~------~~~~Sg-a~~SikiWn~~t~kci----RTi---~~~y~l~~~Fvpgd~~Iv~G~k 432 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDS------ILLASG-AGESIKIWNRDTLKCI----RTI---TCGYILASKFVPGDRYIVLGTK 432 (888)
T ss_pred eeeccchhheeEEEeecCc------eeeeec-CCCcEEEEEccCccee----EEe---ccccEEEEEecCCCceEEEecc
Confidence 3567999999999999863 455664 5679999999876432 222 3357899999999999999999
Q ss_pred CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC-----CCCeeEEEEE----eecCccC
Q 018675 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM-----PGNEFECVSV----LQGHAQD 165 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~-----~~~~~~~~~~----~~~h~~~ 165 (352)
.|.+.+||..... .+.+.++|+++++.++.+|++..+++||.|.+|++||.. ++...+.+.. .-.-...
T Consensus 433 ~Gel~vfdlaS~~--l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~dd 510 (888)
T KOG0306|consen 433 NGELQVFDLASAS--LVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDD 510 (888)
T ss_pred CCceEEEEeehhh--hhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEecccc
Confidence 9999999987653 345667999999999999999999999999999999963 1111111111 0112457
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 166 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
|.|+.+||++.+|+++=-|+++++|.+..- + +.-...||.-||.|++.+||+.+++|||.|.+||+|.++.
T Consensus 511 vL~v~~Spdgk~LaVsLLdnTVkVyflDtl-----K----FflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdF 581 (888)
T KOG0306|consen 511 VLCVSVSPDGKLLAVSLLDNTVKVYFLDTL-----K----FFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDF 581 (888)
T ss_pred EEEEEEcCCCcEEEEEeccCeEEEEEecce-----e----eeeeecccccceeEEeccCCcCeEEeccCCCceEEecccc
Confidence 889999999999999999999999965431 1 2224569999999999999999999999999999998764
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEE
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 324 (352)
... +++ .-.|+.++.++.|-|.. .+.+++-|+.++.|+..+ . ..++++.+|...|.++
T Consensus 582 GDC-----HKS-------~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k--------F-e~iq~L~~H~~ev~cL 640 (888)
T KOG0306|consen 582 GDC-----HKS-------FFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK--------F-EEIQKLDGHHSEVWCL 640 (888)
T ss_pred chh-----hhh-------hhcccCceeEEEEcccceeEEEecCcceEEeechhh--------h-hhheeeccchheeeee
Confidence 322 110 11367788889888865 688999999999996543 1 2356678999999999
Q ss_pred EecCCCcceEEEecCCCeEEEEeecc
Q 018675 325 QWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 325 ~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+.+|+|. +++|+|.|..||+|+-..
T Consensus 641 av~~~G~-~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 641 AVSPNGS-FVVSSSHDKSIRLWERTD 665 (888)
T ss_pred EEcCCCC-eEEeccCCceeEeeeccC
Confidence 9999997 678999999999998653
No 43
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.4e-30 Score=225.11 Aligned_cols=283 Identities=25% Similarity=0.394 Sum_probs=223.4
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
++..|+++|-|+++||.. |.++++-..|.|.|||.++....... ....-+|+++.|-+-.+.+++|+.|
T Consensus 8 k~~~rSdRVKsVd~HPte------Pw~la~LynG~V~IWnyetqtmVksf-----eV~~~PvRa~kfiaRknWiv~GsDD 76 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTE------PWILAALYNGDVQIWNYETQTMVKSF-----EVSEVPVRAAKFIARKNWIVTGSDD 76 (794)
T ss_pred HhhccCCceeeeecCCCC------ceEEEeeecCeeEEEecccceeeeee-----eecccchhhheeeeccceEEEecCC
Confidence 455699999999999984 68888899999999999876543221 2245789999999999999999999
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC-
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT- 174 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~- 174 (352)
..|++|+..+. +.+..+.+|..-|++++.+|...+++|+|+|-+|++||-. +.+.+..++.+|..-|++++|.|.
T Consensus 77 ~~IrVfnynt~--ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we--~~wa~~qtfeGH~HyVMqv~fnPkD 152 (794)
T KOG0276|consen 77 MQIRVFNYNTG--EKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWE--NEWACEQTFEGHEHYVMQVAFNPKD 152 (794)
T ss_pred ceEEEEecccc--eeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeecc--CceeeeeEEcCcceEEEEEEecCCC
Confidence 99999998766 4578889999999999999999999999999999999975 456778889999999999999995
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC--CCCEEEEEeCCCcEEEEcCCccccccCC
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA--KGDKLVSCSDDLTIKIWGADITRMQSGD 252 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (352)
.+.+++++-|++|++|.+..... ..++ .||+..|++++|-+ |..||+||++|.++||||........
T Consensus 153 ~ntFaS~sLDrTVKVWslgs~~~-----nfTl----~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~-- 221 (794)
T KOG0276|consen 153 PNTFASASLDRTVKVWSLGSPHP-----NFTL----EGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQ-- 221 (794)
T ss_pred ccceeeeeccccEEEEEcCCCCC-----ceee----eccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHH--
Confidence 45799999999999998776532 2233 38999999999976 45799999999999999976432211
Q ss_pred CCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 253 GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
++ ..|.+.+..+.+.|.- ++++|+.||++++|......+. ..+.-.-.+|.+++-.+.+.
T Consensus 222 ---------TL-eGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE---------~tLn~gleRvW~I~~~k~~~ 282 (794)
T KOG0276|consen 222 ---------TL-EGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLE---------KTLNYGLERVWCIAAHKGDG 282 (794)
T ss_pred ---------Hh-hcccccceEEEecCCCcEEEEecCCccEEEecCcceehh---------hhhhcCCceEEEEeecCCCC
Confidence 11 2366678888888874 8999999999999965432111 12223345788888877665
Q ss_pred ceEEEecCCCeEE
Q 018675 332 RLLASASDDGMIK 344 (352)
Q Consensus 332 ~~l~s~~~Dg~i~ 344 (352)
+ ++.|.+.|.|.
T Consensus 283 ~-i~vG~Deg~i~ 294 (794)
T KOG0276|consen 283 K-IAVGFDEGSVT 294 (794)
T ss_pred e-EEEeccCCcEE
Confidence 4 56676666553
No 44
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=1.2e-30 Score=211.12 Aligned_cols=306 Identities=30% Similarity=0.507 Sum_probs=239.0
Q ss_pred ccCCccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEEC
Q 018675 4 LDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS 83 (352)
Q Consensus 4 ~~~~~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 83 (352)
.+++...+..+..|.||++.|+.++....+ +.+.|+|.|.+.+||.++++..+.+ ...|.+.|+++.|+
T Consensus 131 Fk~~t~~~~lvre~~GHkDGiW~Vaa~~tq------pi~gtASADhTA~iWs~Esg~CL~~-----Y~GH~GSVNsikfh 199 (481)
T KOG0300|consen 131 FKDGTVKFRLVRELEGHKDGIWHVAADSTQ------PICGTASADHTARIWSLESGACLAT-----YTGHTGSVNSIKFH 199 (481)
T ss_pred ecCCceeEeehhhhcccccceeeehhhcCC------cceeecccccceeEEeeccccceee-----ecccccceeeEEec
Confidence 356666778888999999999999876653 6899999999999999998864332 25699999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEc------cC--------Cc------------------------eeeeEeeccccCCeeEEE
Q 018675 84 PSGKLLATASFDATTCIWED------VG--------GD------------------------YECVATLEGHENEVKSVS 125 (352)
Q Consensus 84 ~~~~~l~s~~~d~~i~i~~~------~~--------~~------------------------~~~~~~~~~h~~~v~~v~ 125 (352)
+.+.++++++.|++..||.. .. ++ ..++..+.+|.+.|.+..
T Consensus 200 ~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~d 279 (481)
T KOG0300|consen 200 NSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACD 279 (481)
T ss_pred cccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehh
Confidence 99999999999999999961 10 00 013456788999999999
Q ss_pred ECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEee
Q 018675 126 WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT 205 (352)
Q Consensus 126 ~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~ 205 (352)
|-..|++++++++|++..+||+..+. .+..+.+|....+.+.-+|+.+++++.+.|.+.++||++.. ++.
T Consensus 280 WL~gg~Q~vTaSWDRTAnlwDVEtge---~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRea-------I~s 349 (481)
T KOG0300|consen 280 WLAGGQQMVTASWDRTANLWDVETGE---VVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREA-------IQS 349 (481)
T ss_pred hhcCcceeeeeeccccceeeeeccCc---eeccccCcchhccccccCCcceEEEEeccCceeEeccchhh-------cce
Confidence 99999999999999999999997664 56788999999999999999999999999999999988643 222
Q ss_pred eeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEe
Q 018675 206 ISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIAS 284 (352)
Q Consensus 206 ~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s 284 (352)
. ....||+..|+++.|..+ ..+++|++|.+||+||++. |. .++.++ ..+.++..+..+.++ +++.
T Consensus 350 V-~VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrN--MR--------splATI--RtdS~~NRvavs~g~~iIAi 415 (481)
T KOG0300|consen 350 V-AVFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRN--MR--------SPLATI--RTDSPANRVAVSKGHPIIAI 415 (481)
T ss_pred e-eeecccccceeEEEEecC-CceeecCCCceEEEeeecc--cc--------Ccceee--ecCCccceeEeecCCceEEe
Confidence 2 234589999999999766 4589999999999999852 21 122222 134456667777776 6777
Q ss_pred cCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCC--cceEEEecCCCeEEEEeecc
Q 018675 285 GAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE--RRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 285 ~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~--~~~l~s~~~Dg~i~iw~~~~ 350 (352)
-..+..+++|+.++.-+. +......++|..-|++++|+.+. -. |.|+|-|..+.=|++..
T Consensus 416 PhDNRqvRlfDlnG~Rla-----RlPrtsRqgHrRMV~c~AW~eehp~cn-LftcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 416 PHDNRQVRLFDLNGNRLA-----RLPRTSRQGHRRMVTCCAWLEEHPACN-LFTCGFDRMVAGWKINT 477 (481)
T ss_pred ccCCceEEEEecCCCccc-----cCCcccccccceeeeeeeccccCcccc-cccccccceeeeeEecc
Confidence 777889999987664432 23333457999999999997432 23 45999999999999864
No 45
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=4.6e-30 Score=237.44 Aligned_cols=297 Identities=27% Similarity=0.451 Sum_probs=220.7
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEee--CCCeEEEEecCCCc---eeee----eeeeeecceecceEEEEECCCCCEE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCS--GDKTVRIWEQSASS---RFWN----CKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s--~D~~v~~w~~~~~~---~~~~----~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
.+...|++|+.+|+ +..+|||+ .|+.+++|+.+.-. .... ........|.+.|+|+.|+|||++|
T Consensus 11 H~~~~IfSIdv~pd------g~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~l 84 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPD------GVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYL 84 (942)
T ss_pred cCCeeEEEEEecCC------ceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeE
Confidence 34557899999997 68999999 99999999865321 0000 0111224589999999999999999
Q ss_pred EEEeCCCcEEEEEccC----------------CceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCee
Q 018675 90 ATASFDATTCIWEDVG----------------GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~----------------~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 153 (352)
|+|+.|+.+.+|+... ..+.+...+.+|.+.|..++|+|++.+|++++-|++|.+|+....
T Consensus 85 AsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF--- 161 (942)
T KOG0973|consen 85 ASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTF--- 161 (942)
T ss_pred eeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccc---
Confidence 9999999999998652 013456778899999999999999999999999999999997543
Q ss_pred EEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeec--cCCCCcccEEEEEEcCCCCEEEE
Q 018675 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE--SNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
+.+..+.+|...|..+.|.|-|+++++-+.|++|++|...+ |.+.+.+.+ ...........+.|+|||.+|++
T Consensus 162 ~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d-----w~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las 236 (942)
T KOG0973|consen 162 ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD-----WGIEKSITKPFEESPLTTFFLRLSWSPDGHHLAS 236 (942)
T ss_pred eeeeeeecccccccceEECCccCeeeeecCCceEEEEEccc-----ceeeEeeccchhhCCCcceeeecccCCCcCeecc
Confidence 67788999999999999999999999999999999996433 444444432 12234567888999999999998
Q ss_pred EeC----CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC------Cc------------eEEecCCCC
Q 018675 232 CSD----DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR------EG------------IIASGAADD 289 (352)
Q Consensus 232 ~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~------------~~~s~~~d~ 289 (352)
.-. -..+.|.+- ..|+--..+.+ |..++..+.|.| .. ++|+|+.|+
T Consensus 237 ~nA~n~~~~~~~IieR-----------~tWk~~~~LvG-H~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDr 304 (942)
T KOG0973|consen 237 PNAVNGGKSTIAIIER-----------GTWKVDKDLVG-HSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDR 304 (942)
T ss_pred hhhccCCcceeEEEec-----------CCceeeeeeec-CCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCc
Confidence 632 225565532 23443344433 555667666665 11 688999999
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
++-+|.... .+.++.-..-.+..|.+++|+|||..+| .+|.||+|.+..++.
T Consensus 305 SlSVW~T~~--------~RPl~vi~~lf~~SI~DmsWspdG~~Lf-acS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 305 SLSVWNTAL--------PRPLFVIHNLFNKSIVDMSWSPDGFSLF-ACSLDGTVALIHFEE 356 (942)
T ss_pred cEEEEecCC--------CCchhhhhhhhcCceeeeeEcCCCCeEE-EEecCCeEEEEEcch
Confidence 999996421 1111111223356899999999997655 699999999988753
No 46
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.98 E-value=7.6e-30 Score=206.48 Aligned_cols=310 Identities=16% Similarity=0.292 Sum_probs=212.6
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce--eeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR--FWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
.+.+|+||.+.|++++|+.+ ++.|||++.|++||+|++..... .......++.. ..+.+.|+||-+.++
T Consensus 78 ~~~~LKgH~~~vt~~~FsSd------GK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~d---hpT~V~FapDc~s~v 148 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSD------GKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYD---HPTRVVFAPDCKSVV 148 (420)
T ss_pred hhhhhhccCCceeeeEEcCC------CceeEEEeCCceEEEEecchhhhhhhhHhhccccCC---CceEEEECCCcceEE
Confidence 34678999999999999987 68999999999999999865321 10111122222 357789999987554
Q ss_pred -EEeCCCcEEEEEccC---Cceee----eE---eeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe
Q 018675 91 -TASFDATTCIWEDVG---GDYEC----VA---TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159 (352)
Q Consensus 91 -s~~~d~~i~i~~~~~---~~~~~----~~---~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 159 (352)
+.-...++++|.... +.... +- --+.|.-.|..+.....+.+|++++.|.+|.+|+++ ++. +..+
T Consensus 149 v~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~---L~~i 224 (420)
T KOG2096|consen 149 VSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQL---LQSI 224 (420)
T ss_pred EEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cce---eeee
Confidence 445566888885421 11111 11 113456667777777788999999999999999987 443 3334
Q ss_pred ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEE
Q 018675 160 QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239 (352)
Q Consensus 160 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~ 239 (352)
...+..-...+.+|+|+++++++....+++|.+-......++..... ..+.||.+.|.+++|+|+.+.+++.+.||++|
T Consensus 225 dtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rv-f~LkGH~saV~~~aFsn~S~r~vtvSkDG~wr 303 (420)
T KOG2096|consen 225 DTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRV-FSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWR 303 (420)
T ss_pred ccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhh-heeccchhheeeeeeCCCcceeEEEecCCcEE
Confidence 44445556778999999999999999999997644433333322222 24569999999999999999999999999999
Q ss_pred EEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCc
Q 018675 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 319 (352)
+||.+.......++.. .+.-.............+..+|++.+++.+....++++........ . .....|+.
T Consensus 304 iwdtdVrY~~~qDpk~-Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~-----~---~~e~~h~~ 374 (420)
T KOG2096|consen 304 IWDTDVRYEAGQDPKI-LKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDY-----P---ELEDIHST 374 (420)
T ss_pred EeeccceEecCCCchH-hhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccc-----h---hHHHhhcC
Confidence 9998764322211110 0100000011233445788999998888888888888865432211 1 12357999
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
.|.+|+|+|+|+ +++|+| |..+++.-
T Consensus 375 ~Is~is~~~~g~-~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 375 TISSISYSSDGK-YIATCG-DRYVRVIR 400 (420)
T ss_pred ceeeEEecCCCc-EEeeec-ceeeeeec
Confidence 999999999997 578888 77777753
No 47
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=6.6e-30 Score=223.32 Aligned_cols=212 Identities=26% Similarity=0.408 Sum_probs=177.6
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
++.+++-...+|.+..|-+. .+.+++||+|..||+|+..+..++.. .++|...|++++.+|...+++++
T Consensus 47 mVksfeV~~~PvRa~kfiaR------knWiv~GsDD~~IrVfnynt~ekV~~-----FeAH~DyIR~iavHPt~P~vLts 115 (794)
T KOG0276|consen 47 MVKSFEVSEVPVRAAKFIAR------KNWIVTGSDDMQIRVFNYNTGEKVKT-----FEAHSDYIRSIAVHPTLPYVLTS 115 (794)
T ss_pred eeeeeeecccchhhheeeec------cceEEEecCCceEEEEecccceeeEE-----eeccccceeeeeecCCCCeEEec
Confidence 34445555566666666665 36899999999999999988764322 25699999999999999999999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
+.|-+|++|+.+. .+.+.++++||..-|++++|+| |.+.|++++-|+||+||.+-+. .+..++.+|...|+|+.+
T Consensus 116 SDDm~iKlW~we~-~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~---~~nfTl~gHekGVN~Vdy 191 (794)
T KOG0276|consen 116 SDDMTIKLWDWEN-EWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSP---HPNFTLEGHEKGVNCVDY 191 (794)
T ss_pred CCccEEEEeeccC-ceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCC---CCceeeeccccCcceEEe
Confidence 9999999999864 5778899999999999999999 6678999999999999998433 345678899999999999
Q ss_pred cCC--CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccc
Q 018675 172 HPT--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248 (352)
Q Consensus 172 ~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (352)
-+. .++|++|+.|..+++||... ..|+++++ ||...|..+.|+|.-..++||+.||++|||.....++
T Consensus 192 y~~gdkpylIsgaDD~tiKvWDyQt-----k~CV~TLe----GHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~l 261 (794)
T KOG0276|consen 192 YTGGDKPYLISGADDLTIKVWDYQT-----KSCVQTLE----GHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKL 261 (794)
T ss_pred ccCCCcceEEecCCCceEEEeecch-----HHHHHHhh----cccccceEEEecCCCcEEEEecCCccEEEecCcceeh
Confidence 874 46999999999999997543 35676664 8999999999999999999999999999997654444
No 48
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=6.7e-31 Score=205.87 Aligned_cols=288 Identities=24% Similarity=0.368 Sum_probs=221.9
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
+-.||+.+|-.++|+|.. +.+-+|++++.|+.-.+-+-+++.=+ ..+ ..|.+.|.++.++.+....|+++.|
T Consensus 9 ~c~ghtrpvvdl~~s~it---p~g~flisa~kd~~pmlr~g~tgdwi----gtf-eghkgavw~~~l~~na~~aasaaad 80 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPIT---PDGYFLISASKDGKPMLRNGDTGDWI----GTF-EGHKGAVWSATLNKNATRAASAAAD 80 (334)
T ss_pred EEcCCCcceeEEeccCCC---CCceEEEEeccCCCchhccCCCCCcE----Eee-eccCcceeeeecCchhhhhhhhccc
Confidence 345999999999999853 45789999999999888766655321 122 4599999999999999999999999
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 175 (352)
-+.++||..+++. +..+ .|..-|.+++|+.+.+.|++|+.+..++++|++... .+...+.+|+..|+.+-|...+
T Consensus 81 ftakvw~a~tgde--lhsf-~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~--App~E~~ghtg~Ir~v~wc~eD 155 (334)
T KOG0278|consen 81 FTAKVWDAVTGDE--LHSF-EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK--APPKEISGHTGGIRTVLWCHED 155 (334)
T ss_pred chhhhhhhhhhhh--hhhh-hhhheeeeEEecccchhhhccchHHHhhhhhccCCC--CCchhhcCCCCcceeEEEeccC
Confidence 9999999888753 3444 478899999999999999999999999999986543 2345678999999999999888
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCc
Q 018675 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA 255 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (352)
+.+++.+.|+.|++||.+.. ...+++. ...+|.++.++++|++|. -...+.|++||.+..... +
T Consensus 156 ~~iLSSadd~tVRLWD~rTg-----t~v~sL~-----~~s~VtSlEvs~dG~ilT-ia~gssV~Fwdaksf~~l-----K 219 (334)
T KOG0278|consen 156 KCILSSADDKTVRLWDHRTG-----TEVQSLE-----FNSPVTSLEVSQDGRILT-IAYGSSVKFWDAKSFGLL-----K 219 (334)
T ss_pred ceEEeeccCCceEEEEeccC-----cEEEEEe-----cCCCCcceeeccCCCEEE-EecCceeEEeccccccce-----e
Confidence 89999999999999987653 2344553 346799999999998654 445678999997532210 1
Q ss_pred cceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceE
Q 018675 256 SWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLL 334 (352)
Q Consensus 256 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l 334 (352)
... ..-.|.+.+..|+ +.+++|+.|..++.|++..+.. +-.-..+|-++|.++.|+|+|. ++
T Consensus 220 s~k--------~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeE--------i~~~nkgh~gpVhcVrFSPdGE-~y 282 (334)
T KOG0278|consen 220 SYK--------MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEE--------IGSYNKGHFGPVHCVRFSPDGE-LY 282 (334)
T ss_pred ecc--------CccccccccccCCCceEEecCcceEEEEEeccCCce--------eeecccCCCCceEEEEECCCCc-ee
Confidence 111 1122444455564 5899999999999987654321 1111478999999999999997 78
Q ss_pred EEecCCCeEEEEeec
Q 018675 335 ASASDDGMIKIWELA 349 (352)
Q Consensus 335 ~s~~~Dg~i~iw~~~ 349 (352)
++||+||+||||.+.
T Consensus 283 AsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 283 ASGSEDGTIRLWQTT 297 (334)
T ss_pred eccCCCceEEEEEec
Confidence 999999999999874
No 49
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=3.4e-29 Score=223.02 Aligned_cols=313 Identities=24% Similarity=0.422 Sum_probs=232.0
Q ss_pred cccCCccce------eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecc
Q 018675 3 FLDDGNYEL------REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRT 76 (352)
Q Consensus 3 ~~~~~~~~~------~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~ 76 (352)
+|-||++++ ....++.||+.+|+++.|... |..|||||.|+.|.+||+-.....++. ..|+..
T Consensus 83 GYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~------G~rlaSGskDt~IIvwDlV~E~Gl~rL-----~GHkd~ 151 (888)
T KOG0306|consen 83 GYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKI------GTRLASGSKDTDIIVWDLVGEEGLFRL-----RGHKDS 151 (888)
T ss_pred EecCceEEeeccCCCceeeeecccccceEEEEEccc------CceEeecCCCccEEEEEeccceeeEEe-----ecchHH
Confidence 355666664 455689999999999999876 679999999999999998654433322 458899
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC-------
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP------- 149 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~------- 149 (352)
|+..-|..+.+++++.+.|+.|++||..+. .|..+.-.|.+.++++++.+ +.+++++.|..+++|++..
T Consensus 152 iT~~~F~~~~~~lvS~sKDs~iK~WdL~tq--hCf~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~ 227 (888)
T KOG0306|consen 152 ITQALFLNGDSFLVSVSKDSMIKFWDLETQ--HCFETHVDHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKET 227 (888)
T ss_pred HhHHhccCCCeEEEEeccCceEEEEecccc--eeeeEEecccceEEEEEEec--ceEEEEecCCceEEEEeecccccccc
Confidence 999889888899999999999999998765 56677778999999999987 7899999999999999810
Q ss_pred -----------------CC-------------------------------------------------------------
Q 018675 150 -----------------GN------------------------------------------------------------- 151 (352)
Q Consensus 150 -----------------~~------------------------------------------------------------- 151 (352)
++
T Consensus 228 ~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl 307 (888)
T KOG0306|consen 228 NRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSL 307 (888)
T ss_pred cccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhH
Confidence 00
Q ss_pred -------------------------eeE-----------EE------------------EEeecCccCeeEEEEcCCCCE
Q 018675 152 -------------------------EFE-----------CV------------------SVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 152 -------------------------~~~-----------~~------------------~~~~~h~~~v~~~~~~~~~~~ 177 (352)
... +. -.+.+|...|+.++++.+...
T Consensus 308 ~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~ 387 (888)
T KOG0306|consen 308 SDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSIL 387 (888)
T ss_pred HHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCcee
Confidence 000 00 113467778888889877665
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeee------------------------------------ccCCCCcccEEEEE
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTIS------------------------------------ESNNGHSSTIWALS 221 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~------------------------------------~~~~~h~~~i~~l~ 221 (352)
+++|+ .+.+++|+.... +|+.++. +...+|.+.|++++
T Consensus 388 ~~Sga-~~SikiWn~~t~-----kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~ 461 (888)
T KOG0306|consen 388 LASGA-GESIKIWNRDTL-----KCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSIS 461 (888)
T ss_pred eeecC-CCcEEEEEccCc-----ceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeee
Confidence 55554 677999965421 1221111 12247999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEcCCccccccCCCCc----cceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 222 FNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA----SWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 222 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
.+||+..+++||.|.+|++||+.+... ..+.. ...+..++ ..+..+.++..+|++ +++.+--|+++.+|..
T Consensus 462 ~~pD~~g~vT~saDktVkfWdf~l~~~--~~gt~~k~lsl~~~rtL--el~ddvL~v~~Spdgk~LaVsLLdnTVkVyfl 537 (888)
T KOG0306|consen 462 LSPDNKGFVTGSADKTVKFWDFKLVVS--VPGTQKKVLSLKHTRTL--ELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFL 537 (888)
T ss_pred ecCCCCceEEecCCcEEEEEeEEEEec--cCcccceeeeeccceEE--eccccEEEEEEcCCCcEEEEEeccCeEEEEEe
Confidence 999999999999999999999764322 11111 00111111 235678899999987 7788888999999854
Q ss_pred cCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 297 SKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.. -.+...+.||..+|.++..|||+. +++|||.|+.|+||-+..
T Consensus 538 Dt---------lKFflsLYGHkLPV~smDIS~DSk-livTgSADKnVKiWGLdF 581 (888)
T KOG0306|consen 538 DT---------LKFFLSLYGHKLPVLSMDISPDSK-LIVTGSADKNVKIWGLDF 581 (888)
T ss_pred cc---------eeeeeeecccccceeEEeccCCcC-eEEeccCCCceEEecccc
Confidence 31 123345789999999999999985 899999999999997754
No 50
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.2e-29 Score=194.83 Aligned_cols=287 Identities=19% Similarity=0.322 Sum_probs=217.1
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
+-+.+..|.+|.++|..+.|+-+ +++.+||+.|++||+|+...+..+ ..+ ..|...|..++.+.|...+
T Consensus 6 ptkr~~~l~~~qgaV~avryN~d------GnY~ltcGsdrtvrLWNp~rg~li----ktY-sghG~EVlD~~~s~Dnskf 74 (307)
T KOG0316|consen 6 PTKRLSILDCAQGAVRAVRYNVD------GNYCLTCGSDRTVRLWNPLRGALI----KTY-SGHGHEVLDAALSSDNSKF 74 (307)
T ss_pred cchhceeecccccceEEEEEccC------CCEEEEcCCCceEEeeccccccee----eee-cCCCceeeecccccccccc
Confidence 33456778999999999999886 689999999999999998765422 222 4588899999999999999
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
++|+.|..+.+||..+++ ....+.+|.+.|+.+.|+.+...+++|+.|.++++||-+. +..+++..+......|.++
T Consensus 75 ~s~GgDk~v~vwDV~TGk--v~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS-~s~ePiQildea~D~V~Si 151 (307)
T KOG0316|consen 75 ASCGGDKAVQVWDVNTGK--VDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRS-RSFEPIQILDEAKDGVSSI 151 (307)
T ss_pred ccCCCCceEEEEEcccCe--eeeecccccceeeEEEecCcceEEEeccccceeEEEEccc-CCCCccchhhhhcCceeEE
Confidence 999999999999998884 4667899999999999999999999999999999999764 3445666666666778887
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccc-
Q 018675 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM- 248 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~- 248 (352)
... +..+++||.||+++.|+++.... . .+-.+.+|++++|+++++..+.++-|+++++.|-...++
T Consensus 152 ~v~--~heIvaGS~DGtvRtydiR~G~l---------~--sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL 218 (307)
T KOG0316|consen 152 DVA--EHEIVAGSVDGTVRTYDIRKGTL---------S--SDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLL 218 (307)
T ss_pred Eec--ccEEEeeccCCcEEEEEeeccee---------e--hhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHH
Confidence 775 44689999999999998875421 1 112457899999999999999999999999998654432
Q ss_pred ccCCCCccceeeEEeecccCcceEEEE--ec-CCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcc-eeEE
Q 018675 249 QSGDGYASWRHLCTISGYHDRTIFSVH--WS-REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD-VNSV 324 (352)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~-~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~~ 324 (352)
.+..+ |.+.-+.+. +. .+..+++|+.||.+++|+.-.. .++.....|... |+++
T Consensus 219 ~sYkG-------------hkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~---------~~~sk~~~~~~v~v~dl 276 (307)
T KOG0316|consen 219 KSYKG-------------HKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDE---------TQISKLSVVSTVIVTDL 276 (307)
T ss_pred HHhcc-------------cccceeeeeeeecccceeEEeccCCceEEEEEeccc---------eeeeeeccCCceeEEee
Confidence 22222 222223222 22 2457999999999999965332 223334445554 8999
Q ss_pred EecCCCcceEEEecCCCeEEEEe
Q 018675 325 QWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 325 ~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
+++|.-..++ ++. ++.+..|.
T Consensus 277 ~~hp~~~~f~-~A~-~~~~~~~~ 297 (307)
T KOG0316|consen 277 SCHPTMDDFI-TAT-GHGDLFWY 297 (307)
T ss_pred ecccCcccee-Eec-CCceecee
Confidence 9999876655 444 45555664
No 51
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.97 E-value=4.8e-30 Score=206.99 Aligned_cols=304 Identities=21% Similarity=0.303 Sum_probs=210.7
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCC------Cceee------e-eeeeeecceecceEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA------SSRFW------N-CKAVLEEMHTRTVRS 79 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~------~~~~~------~-~~~~~~~~h~~~v~~ 79 (352)
+...+..|+..+.+.+|+|+ +.++||||.|.+|+|.|.+. .+... . +.-..-..|...|++
T Consensus 104 Et~ylt~HK~~cR~aafs~D------G~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~ 177 (430)
T KOG0640|consen 104 ETKYLTSHKSPCRAAAFSPD------GSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVND 177 (430)
T ss_pred ceEEEeecccceeeeeeCCC------CcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccc
Confidence 34456789999999999998 68999999999999999751 11000 0 000011358899999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe
Q 018675 80 CAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL 159 (352)
Q Consensus 80 ~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 159 (352)
+.|+|...+|++|+.|++++++|......+.....-....+|++++|+|.|++|+.|.+-.++++||+...+-+.....-
T Consensus 178 l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd 257 (430)
T KOG0640|consen 178 LDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPD 257 (430)
T ss_pred eeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcc
Confidence 99999999999999999999999643211111111223568999999999999999999999999998654322222334
Q ss_pred ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCc-ccEEEEEEcCCCCEEEEEeCCCcE
Q 018675 160 QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS-STIWALSFNAKGDKLVSCSDDLTI 238 (352)
Q Consensus 160 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~l~~~~~~~~l~s~~~dg~i 238 (352)
..|...|+++.+++++++.++||.||.|++||- -+-+|+.++.. +|+ ..|.+..|..+++|+++.|.|..+
T Consensus 258 ~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDG-----VS~rCv~t~~~---AH~gsevcSa~Ftkn~kyiLsSG~DS~v 329 (430)
T KOG0640|consen 258 DQHTGAITQVRYSSTGSLYVTASKDGAIKLWDG-----VSNRCVRTIGN---AHGGSEVCSAVFTKNGKYILSSGKDSTV 329 (430)
T ss_pred cccccceeEEEecCCccEEEEeccCCcEEeecc-----ccHHHHHHHHh---hcCCceeeeEEEccCCeEEeecCCccee
Confidence 568899999999999999999999999999953 23356666543 453 589999999999999999999999
Q ss_pred EEEcCCccccc---cCCCCccceeeEEeecccCcceEEEEecCCceEEec-CCCCeEEEEEccCCccccCcccceeeecc
Q 018675 239 KIWGADITRMQ---SGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASG-AADDSVQFFVESKDDLIDGPSYKMLLKKE 314 (352)
Q Consensus 239 ~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 314 (352)
++|.+...++. ...+...-... ..+.++ .....+++.- -..+.+.-|+....+ ......
T Consensus 330 kLWEi~t~R~l~~YtGAg~tgrq~~------rtqAvF---NhtEdyVl~pDEas~slcsWdaRtad--------r~~l~s 392 (430)
T KOG0640|consen 330 KLWEISTGRMLKEYTGAGTTGRQKH------RTQAVF---NHTEDYVLFPDEASNSLCSWDARTAD--------RVALLS 392 (430)
T ss_pred eeeeecCCceEEEEecCCcccchhh------hhhhhh---cCccceEEccccccCceeeccccchh--------hhhhcc
Confidence 99987654432 11111110000 011111 0112232222 122345556443221 111234
Q ss_pred cccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 315 KAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 315 ~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.+|++.+..+..||.+. .++|||.|-.+|.|--
T Consensus 393 lgHn~a~R~i~HSP~~p-~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 393 LGHNGAVRWIVHSPVEP-AFMTCSDDFRARFWYR 425 (430)
T ss_pred cCCCCCceEEEeCCCCC-ceeeecccceeeeeee
Confidence 68999999999999987 5779999999999953
No 52
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=9.4e-31 Score=212.34 Aligned_cols=289 Identities=22% Similarity=0.370 Sum_probs=221.8
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeee---eecceecceEEEEECCCCCEEEEEeCC
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV---LEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
|.+.-+-|..|+|+ +++|+|||-||.+.+|+..+++.-...++. -..++..+|.|+.|+-|..++|+|+.|
T Consensus 211 g~KSh~EcA~FSPD------gqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqD 284 (508)
T KOG0275|consen 211 GQKSHVECARFSPD------GQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQD 284 (508)
T ss_pred ccccchhheeeCCC------CceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcC
Confidence 56667889999998 689999999999999998776422111111 113578999999999999999999999
Q ss_pred CcEEEEEccCCceeeeEeec-cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 96 ATTCIWEDVGGDYECVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
|.|++|...++. |+..+. +|+..|+|+.|+.++..+++++.|.++++.-+..+ +++..+.+|..-|+.+.|.++
T Consensus 285 GkIKvWri~tG~--ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSG---K~LKEfrGHsSyvn~a~ft~d 359 (508)
T KOG0275|consen 285 GKIKVWRIETGQ--CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSG---KCLKEFRGHSSYVNEATFTDD 359 (508)
T ss_pred CcEEEEEEecch--HHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccc---hhHHHhcCccccccceEEcCC
Confidence 999999998874 444443 89999999999999999999999999999998766 456778999999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCccccccCCC
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADITRMQSGDG 253 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (352)
+..+++++.||++++|+...+ .|..++. ..+...+|+++-.-|. -..++.|...+++.|-.+...-.
T Consensus 360 G~~iisaSsDgtvkvW~~Ktt-----eC~~Tfk--~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvV----- 427 (508)
T KOG0275|consen 360 GHHIISASSDGTVKVWHGKTT-----ECLSTFK--PLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVV----- 427 (508)
T ss_pred CCeEEEecCCccEEEecCcch-----hhhhhcc--CCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEE-----
Confidence 999999999999999965443 4544443 2245678888888775 45688899999999886542111
Q ss_pred CccceeeEEeec--ccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCC
Q 018675 254 YASWRHLCTISG--YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 254 ~~~~~~~~~~~~--~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~ 330 (352)
..++. ...+...+...+|.| .+.+.+.|+.++.+....+.+ -.....|...+-.++.+|..
T Consensus 428 -------rsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~L---------E~tl~VhEkdvIGl~HHPHq 491 (508)
T KOG0275|consen 428 -------RSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKL---------ERTLPVHEKDVIGLTHHPHQ 491 (508)
T ss_pred -------eeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCce---------eeeeecccccccccccCccc
Confidence 01111 123344555666765 677788899888886543322 23445688889999999974
Q ss_pred cceEEEecCCCeEEEEe
Q 018675 331 RRLLASASDDGMIKIWE 347 (352)
Q Consensus 331 ~~~l~s~~~Dg~i~iw~ 347 (352)
++|||=++||.+++|.
T Consensus 492 -NllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 492 -NLLASYSEDGLLKLWK 507 (508)
T ss_pred -chhhhhcccchhhhcC
Confidence 6899999999999996
No 53
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.2e-30 Score=211.92 Aligned_cols=255 Identities=31% Similarity=0.522 Sum_probs=199.6
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
.|..+|+.+-|.|+-..+++++.|.+|++||..+++. ...+++|...|..|+|+..|.++++++.|-.+++||...
T Consensus 106 g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~--e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~-- 181 (406)
T KOG0295|consen 106 GHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGEL--ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDT-- 181 (406)
T ss_pred ccccceeeeeeccCceEEEEecCCceEEEEEccchhh--hhhhhccccceeEEEEecCccEEEecCCccchhheeHHH--
Confidence 3778999999999999999999999999999988864 667899999999999999999999999999999999753
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
.+.++..+.+|...|.++.|-|.+.++++++.|.+|++|++.. ..|+.++. +|...|..++.+.||..+++
T Consensus 182 ~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~t-----g~cv~t~~----~h~ewvr~v~v~~DGti~As 252 (406)
T KOG0295|consen 182 FFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDT-----GYCVKTFP----GHSEWVRMVRVNQDGTIIAS 252 (406)
T ss_pred HHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEeccc-----ceeEEecc----CchHhEEEEEecCCeeEEEe
Confidence 3566777889999999999999999999999999999997643 35666654 78899999999999999999
Q ss_pred EeCCCcEEEEcCCcccccc-CCCCccceeeEEeecccCcceEEEEec-----CCceEEecCCCCeEEEEEccCCccccCc
Q 018675 232 CSDDLTIKIWGADITRMQS-GDGYASWRHLCTISGYHDRTIFSVHWS-----REGIIASGAADDSVQFFVESKDDLIDGP 305 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~s~~~d~~v~~~~~~~~~~~~~~ 305 (352)
|+.|.++++|-+....... ..+++. ...++.-.+......+... +..++.+++.|++|++|+....
T Consensus 253 ~s~dqtl~vW~~~t~~~k~~lR~hEh--~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg------ 324 (406)
T KOG0295|consen 253 CSNDQTLRVWVVATKQCKAELREHEH--PVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG------ 324 (406)
T ss_pred cCCCceEEEEEeccchhhhhhhcccc--ceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC------
Confidence 9999999999765331110 000000 0001000011110111000 1238999999999999966432
Q ss_pred ccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 306 SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 306 ~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+++.++.+|...|..++|+|.|+ +|+|+.+|+++++||+.+.
T Consensus 325 ---~cL~tL~ghdnwVr~~af~p~Gk-yi~ScaDDktlrvwdl~~~ 366 (406)
T KOG0295|consen 325 ---MCLFTLVGHDNWVRGVAFSPGGK-YILSCADDKTLRVWDLKNL 366 (406)
T ss_pred ---eEEEEEecccceeeeeEEcCCCe-EEEEEecCCcEEEEEeccc
Confidence 44556789999999999999986 6789999999999999764
No 54
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1.1e-28 Score=225.04 Aligned_cols=249 Identities=29% Similarity=0.484 Sum_probs=195.9
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
.+...|.++.|+++|+.+++++.|+.+++|+..+.+......+.+|...|.+++|+|++.++++++.|+++++||+...
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~- 235 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD- 235 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCC-
Confidence 3468899999999999999999999999998754431244556889999999999999999999999999999999322
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
..++.++.+|...|.+++|+|+++++++|+.|++|+||+++.. .+...+ .+|...|.+++|++++.+|++
T Consensus 236 -~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~-----~~~~~l----~~hs~~is~~~f~~d~~~l~s 305 (456)
T KOG0266|consen 236 -GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG-----ECVRKL----KGHSDGISGLAFSPDGNLLVS 305 (456)
T ss_pred -CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC-----eEEEee----eccCCceEEEEECCCCCEEEE
Confidence 2457788999999999999999999999999999999987652 233333 489999999999999999999
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCc-ceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccce
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR-TIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
++.|+.|++||+...... ....+...... .+..+.+++++ +++++..|+.+++|+......
T Consensus 306 ~s~d~~i~vwd~~~~~~~---------~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~-------- 368 (456)
T KOG0266|consen 306 ASYDGTIRVWDLETGSKL---------CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKS-------- 368 (456)
T ss_pred cCCCccEEEEECCCCcee---------eeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcc--------
Confidence 999999999998643210 01111121122 57889998876 889999999999997754322
Q ss_pred eeecccccCc---ceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 310 LLKKEKAHDM---DVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 310 ~~~~~~~h~~---~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.....+|.. .+.+...++.++ ++++|+.|+.|.+|++..
T Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~~-~i~sg~~d~~v~~~~~~s 410 (456)
T KOG0266|consen 369 -VGTYTGHSNLVRCIFSPTLSTGGK-LIYSGSEDGSVYVWDSSS 410 (456)
T ss_pred -eeeecccCCcceeEecccccCCCC-eEEEEeCCceEEEEeCCc
Confidence 223345544 444555577775 688999999999999874
No 55
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=3.6e-29 Score=214.27 Aligned_cols=304 Identities=21% Similarity=0.288 Sum_probs=206.4
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..-..|++|+..|+++++.|. +-.|+|||.|-+|++||...-..-...-..+.--....|++++|++.|..|++
T Consensus 158 shEi~l~hgtk~Vsal~~Dp~------GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLv 231 (641)
T KOG0772|consen 158 SHEIQLKHGTKIVSALAVDPS------GARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILV 231 (641)
T ss_pred cceEeccCCceEEEEeeecCC------CceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEE
Confidence 334568899999999999987 67999999999999999753211000000111112458999999999999888
Q ss_pred EeCCCcEEEEEccCCceee----------eEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEe-
Q 018675 92 ASFDATTCIWEDVGGDYEC----------VATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVL- 159 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~----------~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~- 159 (352)
.+.....+|+|-.+..+.. ...-+||...++|.+|+|.. +.|+|++.|+++++||+...+....+...
T Consensus 232 vsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k 311 (641)
T KOG0772|consen 232 VSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTK 311 (641)
T ss_pred EecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeec
Confidence 8888889999854432211 12236899999999999965 57999999999999999765433222211
Q ss_pred --ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc--cEEEEEEcCCCCEEEEEeCC
Q 018675 160 --QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS--TIWALSFNAKGDKLVSCSDD 235 (352)
Q Consensus 160 --~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~--~i~~l~~~~~~~~l~s~~~d 235 (352)
.+..-.++.++|+|++..+++|..||.|.+|+...-..+...+ ...+|.. .|.+|.|+++|++|++-|.|
T Consensus 312 ~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~------vk~AH~~g~~Itsi~FS~dg~~LlSRg~D 385 (641)
T KOG0772|consen 312 PAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMK------VKDAHLPGQDITSISFSYDGNYLLSRGFD 385 (641)
T ss_pred cCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceE------eeeccCCCCceeEEEeccccchhhhccCC
Confidence 1223467889999999999999999999999764322222111 2346766 99999999999999999999
Q ss_pred CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCC------CCeEEEEEccCCccccCcccc
Q 018675 236 LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAA------DDSVQFFVESKDDLIDGPSYK 308 (352)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~------d~~v~~~~~~~~~~~~~~~~~ 308 (352)
+++|+||++..+. .+..+..+.. .-.-..++|+|+. .+++|.+ .+++.+|+...-+
T Consensus 386 ~tLKvWDLrq~kk----pL~~~tgL~t-----~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d-------- 448 (641)
T KOG0772|consen 386 DTLKVWDLRQFKK----PLNVRTGLPT-----PFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLD-------- 448 (641)
T ss_pred Cceeeeecccccc----chhhhcCCCc-----cCCCCccccCCCceEEEecccccCCCCCceEEEEecccee--------
Confidence 9999999874321 1111111111 1122345677765 4555533 4567777554321
Q ss_pred eeeecccccCcceeEEEecCCCcceEEEecCCCeEEEE
Q 018675 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346 (352)
Q Consensus 309 ~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw 346 (352)
.+++..--...|..+.|+|.=.++++ |+.||+++|+
T Consensus 449 -~v~ki~i~~aSvv~~~WhpkLNQi~~-gsgdG~~~vy 484 (641)
T KOG0772|consen 449 -TVYKIDISTASVVRCLWHPKLNQIFA-GSGDGTAHVY 484 (641)
T ss_pred -eEEEecCCCceEEEEeecchhhheee-ecCCCceEEE
Confidence 12222223667999999997667665 6668999986
No 56
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=7.3e-29 Score=192.87 Aligned_cols=241 Identities=23% Similarity=0.436 Sum_probs=196.8
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
-++++|+++.|+-||++.++++.|.++++|+...+ .++.+..+|..+|..++.+.++..|++|+.|+.+.+||+..++
T Consensus 15 ~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg--~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk 92 (307)
T KOG0316|consen 15 CAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG--ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK 92 (307)
T ss_pred ccccceEEEEEccCCCEEEEcCCCceEEeeccccc--ceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCe
Confidence 36789999999999999999999999999998776 5688899999999999999999999999999999999997764
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
..+.+.+|..+|+.++|..+...+++|+.|..+++||.+... ...++.+.+ ....|.++... +..+++
T Consensus 93 ---v~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s---~ePiQilde----a~D~V~Si~v~--~heIva 160 (307)
T KOG0316|consen 93 ---VDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRS---FEPIQILDE----AKDGVSSIDVA--EHEIVA 160 (307)
T ss_pred ---eeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCC---CCccchhhh----hcCceeEEEec--ccEEEe
Confidence 567899999999999999999999999999999999987643 333444432 34568888775 567999
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccccee
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKML 310 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~ 310 (352)
|+.||++|.||++...+. ..+...+|.++++++++ ..++++-|+++++.+... .++
T Consensus 161 GS~DGtvRtydiR~G~l~--------------sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~t---------Gkl 217 (307)
T KOG0316|consen 161 GSVDGTVRTYDIRKGTLS--------------SDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKET---------GKL 217 (307)
T ss_pred eccCCcEEEEEeecceee--------------hhhcCCcceeEEecCCCCEEEEeeccceeeecccch---------hHH
Confidence 999999999998765432 23567789999999976 788889999999885443 244
Q ss_pred eecccccCc--ceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 311 LKKEKAHDM--DVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 311 ~~~~~~h~~--~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
++.+.+|.. .-.+.+++... ..+++|++||.+.+||+..
T Consensus 218 L~sYkGhkn~eykldc~l~qsd-thV~sgSEDG~Vy~wdLvd 258 (307)
T KOG0316|consen 218 LKSYKGHKNMEYKLDCCLNQSD-THVFSGSEDGKVYFWDLVD 258 (307)
T ss_pred HHHhcccccceeeeeeeecccc-eeEEeccCCceEEEEEecc
Confidence 556677753 33455666544 4688999999999999854
No 57
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=1.9e-28 Score=197.04 Aligned_cols=284 Identities=20% Similarity=0.309 Sum_probs=200.2
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
.-.+.|.+++|+|.. ..+++.+|+|++||+|+++..... ..+ ....|.++|.+++|+.||..+++|+.|+.+
T Consensus 25 pP~DsIS~l~FSP~~-----~~~~~A~SWD~tVR~wevq~~g~~-~~k--a~~~~~~PvL~v~WsddgskVf~g~~Dk~~ 96 (347)
T KOG0647|consen 25 PPEDSISALAFSPQA-----DNLLAAGSWDGTVRIWEVQNSGQL-VPK--AQQSHDGPVLDVCWSDDGSKVFSGGCDKQA 96 (347)
T ss_pred CcccchheeEecccc-----CceEEecccCCceEEEEEecCCcc-cch--hhhccCCCeEEEEEccCCceEEeeccCCce
Confidence 456899999999953 357888999999999998764221 112 224588999999999999999999999999
Q ss_pred EEEEccCCceeeeEeeccccCCeeEEEECCCCc--EEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSVSWNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~--~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
++||+.++. ...+..|.++|.++.|-+... .|+|||+|++|++||.+...++.. +. -.+.+-+++ -...
T Consensus 97 k~wDL~S~Q---~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t---~~-LPeRvYa~D--v~~p 167 (347)
T KOG0647|consen 97 KLWDLASGQ---VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVAT---LQ-LPERVYAAD--VLYP 167 (347)
T ss_pred EEEEccCCC---eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeee---ee-ccceeeehh--ccCc
Confidence 999998874 445678999999999976555 799999999999999986654332 22 122333333 2345
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCcc
Q 018675 177 VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS 256 (352)
Q Consensus 177 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 256 (352)
+++.+..++.|.+|++.+.... ++... ....-.+.+|++.++++..+.|+-+|++-|..++..... .+
T Consensus 168 m~vVata~r~i~vynL~n~~te-~k~~~------SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~--~n--- 235 (347)
T KOG0647|consen 168 MAVVATAERHIAVYNLENPPTE-FKRIE------SPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPK--DN--- 235 (347)
T ss_pred eeEEEecCCcEEEEEcCCCcch-hhhhc------CcccceeeEEEEEecCCceEeeeecceEEEEecCCCCcc--Cc---
Confidence 7888999999999998664321 11111 112346889999999888899999999999876543211 11
Q ss_pred ceeeEEee-c-c--cCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 257 WRHLCTIS-G-Y--HDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 257 ~~~~~~~~-~-~--~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
..-.|... . . .--.+.+++|.|. +.+++++.||+..+|+... +..+.....|..+|++.+|+.+|.
T Consensus 236 FtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkda---------r~kLk~s~~~~qpItcc~fn~~G~ 306 (347)
T KOG0647|consen 236 FTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDA---------RTKLKTSETHPQPITCCSFNRNGS 306 (347)
T ss_pred eeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchh---------hhhhhccCcCCCccceeEecCCCC
Confidence 11111110 0 0 1123556788885 5899999999999996432 122334567999999999999987
Q ss_pred ceEEEecCC
Q 018675 332 RLLASASDD 340 (352)
Q Consensus 332 ~~l~s~~~D 340 (352)
.+....|+|
T Consensus 307 ifaYA~gYD 315 (347)
T KOG0647|consen 307 IFAYALGYD 315 (347)
T ss_pred EEEEEeecc
Confidence 443355555
No 58
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.97 E-value=1.3e-28 Score=197.68 Aligned_cols=249 Identities=24% Similarity=0.426 Sum_probs=193.7
Q ss_pred ecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC
Q 018675 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 70 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~ 149 (352)
...|++.|+.+.|+|+|..+|+|+.|..|.+|+... +.+-..++++|.++|+.+.|+++++.++++|.|.+++.||+..
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~g-dceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t 121 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYG-DCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAET 121 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeecCCcceEEEEeccc-cccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccc
Confidence 346899999999999999999999999999998543 3344567889999999999999999999999999999999987
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
++ +...+++|...++.+.-...+ .++.+++.|+++++||++... +++++. ...+++++.|..++..
T Consensus 122 G~---~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~-----~~~t~~-----~kyqltAv~f~d~s~q 188 (338)
T KOG0265|consen 122 GK---RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE-----AIKTFE-----NKYQLTAVGFKDTSDQ 188 (338)
T ss_pred ce---eeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc-----hhhccc-----cceeEEEEEecccccc
Confidence 64 567788899888887733233 367789999999999876542 333332 2467999999999999
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
+++|+-|+.|++||++... ....+. .|..+|+.+..++.+ ++.+.+-|.++++|+..... +..
T Consensus 189 v~sggIdn~ikvWd~r~~d-----------~~~~ls-Gh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~----p~~ 252 (338)
T KOG0265|consen 189 VISGGIDNDIKVWDLRKND-----------GLYTLS-GHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFA----PSQ 252 (338)
T ss_pred eeeccccCceeeeccccCc-----------ceEEee-cccCceeeEEeccCCCccccccccceEEEEEecccC----CCC
Confidence 9999999999999985321 122233 477889999999876 88999999999999765421 111
Q ss_pred ceeeecccc--cC--cceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 308 KMLLKKEKA--HD--MDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 308 ~~~~~~~~~--h~--~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+ .+....+ |. -....++|+|+++ .+..|+.|..+.+||...
T Consensus 253 R-~v~if~g~~hnfeknlL~cswsp~~~-~i~ags~dr~vyvwd~~~ 297 (338)
T KOG0265|consen 253 R-CVKIFQGHIHNFEKNLLKCSWSPNGT-KITAGSADRFVYVWDTTS 297 (338)
T ss_pred c-eEEEeecchhhhhhhcceeeccCCCC-ccccccccceEEEeeccc
Confidence 1 1222233 33 3456778999987 578899999999999854
No 59
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.97 E-value=1.1e-28 Score=208.53 Aligned_cols=262 Identities=24% Similarity=0.433 Sum_probs=204.4
Q ss_pred cceecceEEEEECCCC-CEEEEEeCCCcEEEEEccCC--------ceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCC
Q 018675 71 EMHTRTVRSCAWSPSG-KLLATASFDATTCIWEDVGG--------DYECVATLEGHENEVKSVSWNASGT-LLATCGRDK 140 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~i~~~~~~--------~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~ 140 (352)
..|.+.|+.+.+-|+. .++|+++..+.+.|||.... +..+-..+.+|.+.=..++|++... .|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 4588999999999865 56778888899999996432 2223347889998778899998544 699999999
Q ss_pred cEEEEecCCCCe----eEEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 141 SVWIWEVMPGNE----FECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 141 ~v~vwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
+|.+||+..... ......+.+|...|..++|+|.. ..+++++.|+.+.|||.+.. .. .......+|..
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~------~~~~~~~ah~~ 273 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TS------KPSHSVKAHSA 273 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CC------CCcccccccCC
Confidence 999999864433 44556788999999999999964 57889999999999998752 11 11223358999
Q ss_pred cEEEEEEcCC-CCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC--ceEEecCCCCeEE
Q 018675 216 TIWALSFNAK-GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQ 292 (352)
Q Consensus 216 ~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~s~~~d~~v~ 292 (352)
.|++++|+|- +..||||+.|++|++||++..+ ..+.++. .|...++.+.|+|. .++++++.|+.+.
T Consensus 274 ~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~----------~~lh~~e-~H~dev~~V~WSPh~etvLASSg~D~rl~ 342 (422)
T KOG0264|consen 274 EVNCVAFNPFNEFILATGSADKTVALWDLRNLN----------KPLHTFE-GHEDEVFQVEWSPHNETVLASSGTDRRLN 342 (422)
T ss_pred ceeEEEeCCCCCceEEeccCCCcEEEeechhcc----------cCceecc-CCCcceEEEEeCCCCCceeEecccCCcEE
Confidence 9999999995 5668899999999999986321 1233333 47888999999995 4899999999999
Q ss_pred EEEccCCcccc-----CcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 293 FFVESKDDLID-----GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 293 ~~~~~~~~~~~-----~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+|+.+..+... ...+.+++....||...|++++|+|...++++|+++|+.+.||++..
T Consensus 343 vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 343 VWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred EEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 99876533221 22344555667899999999999999999999999999999999863
No 60
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=1.7e-27 Score=232.43 Aligned_cols=273 Identities=19% Similarity=0.248 Sum_probs=200.4
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCC----c--eeeeEeeccccCCe
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG----D--YECVATLEGHENEV 121 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~----~--~~~~~~~~~h~~~v 121 (352)
+|-+++|+...-........--...|...|.+++|+|+|+++|+|+.|++|+||+.... . ..+...+. +...|
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v 535 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL 535 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence 56677887654321111110001237889999999999999999999999999986421 0 01122333 35679
Q ss_pred eEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCC
Q 018675 122 KSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDN 199 (352)
Q Consensus 122 ~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~ 199 (352)
.+++|++ .+.+|++++.|++|++||+..+ +.+..+.+|...|++++|+| ++.+|++|+.|+.|++|++...
T Consensus 536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~---~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~---- 608 (793)
T PLN00181 536 SGICWNSYIKSQVASSNFEGVVQVWDVARS---QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG---- 608 (793)
T ss_pred eeEEeccCCCCEEEEEeCCCeEEEEECCCC---eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC----
Confidence 9999987 4789999999999999998654 34566788999999999997 6789999999999999987643
Q ss_pred ceeEeeeeccCCCCcccEEEEEEc-CCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC
Q 018675 200 WHCVQTISESNNGHSSTIWALSFN-AKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR 278 (352)
Q Consensus 200 ~~~~~~~~~~~~~h~~~i~~l~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 278 (352)
.+...+. +...|.++.|+ +++.+|++|+.||.|++||++..+. ....+ ..|...+..+.|.+
T Consensus 609 -~~~~~~~-----~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~----------~~~~~-~~h~~~V~~v~f~~ 671 (793)
T PLN00181 609 -VSIGTIK-----TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKL----------PLCTM-IGHSKTVSYVRFVD 671 (793)
T ss_pred -cEEEEEe-----cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCc----------cceEe-cCCCCCEEEEEEeC
Confidence 2233332 23568899995 5799999999999999999753211 11122 23667888999987
Q ss_pred CceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 279 EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 279 ~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+..+++++.|+++++|+...... .. ....+....+|...++.++|+|++. +|++|+.|+.|+||+..
T Consensus 672 ~~~lvs~s~D~~ikiWd~~~~~~--~~-~~~~l~~~~gh~~~i~~v~~s~~~~-~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 672 SSTLVSSSTDNTLKLWDLSMSIS--GI-NETPLHSFMGHTNVKNFVGLSVSDG-YIATGSETNEVFVYHKA 738 (793)
T ss_pred CCEEEEEECCCEEEEEeCCCCcc--cc-CCcceEEEcCCCCCeeEEEEcCCCC-EEEEEeCCCEEEEEECC
Confidence 78999999999999997653210 00 1122345678999999999999885 78999999999999964
No 61
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2e-28 Score=192.41 Aligned_cols=246 Identities=23% Similarity=0.375 Sum_probs=187.9
Q ss_pred EEEEEccCCCCCCCccEEEEe-----eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEEEEeCCCcE
Q 018675 25 WSLAWKPTAGVDGVAPVFASC-----SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLATASFDATT 98 (352)
Q Consensus 25 ~~i~~~p~~~~~~~~~~l~s~-----s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i 98 (352)
+++.|+|--. ..-.+|++ ...|++.|-++..++.+-.+.. ..-...+..++|+++. ..+++++.||++
T Consensus 12 ysvqfSPf~~---nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s---~d~~D~LfdV~Wse~~e~~~~~a~GDGSL 85 (311)
T KOG0277|consen 12 YSVQFSPFVE---NRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQS---YDTEDGLFDVAWSENHENQVIAASGDGSL 85 (311)
T ss_pred ceeEeccccc---chhheeehhhcccccCceEEEEecCCCCCeEEEEe---eecccceeEeeecCCCcceEEEEecCceE
Confidence 5788999531 11223333 2457888888764433322211 2245789999999965 678889999999
Q ss_pred EEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC-CC
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MD 176 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~ 176 (352)
+|||. +....++..++.|..+|.++.|++ ....++++|+|++|++|+....+ .+.++.+|...|-.+.|+|. .+
T Consensus 86 rl~d~-~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~---Sv~Tf~gh~~~Iy~a~~sp~~~n 161 (311)
T KOG0277|consen 86 RLFDL-TMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN---SVQTFNGHNSCIYQAAFSPHIPN 161 (311)
T ss_pred EEecc-CCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc---ceEeecCCccEEEEEecCCCCCC
Confidence 99994 344457888999999999999998 45678899999999999976544 46679999999999999995 56
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC-CCCEEEEEeCCCcEEEEcCCccccccCCCCc
Q 018675 177 VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLVSCSDDLTIKIWGADITRMQSGDGYA 255 (352)
Q Consensus 177 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (352)
.++++|.|+.+++||++.... .+.++ .|...|.++.|+. +...++||+.|+.||+||++..+.
T Consensus 162 lfas~Sgd~~l~lwdvr~~gk-----~~~i~----ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~------- 225 (311)
T KOG0277|consen 162 LFASASGDGTLRLWDVRSPGK-----FMSIE----AHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT------- 225 (311)
T ss_pred eEEEccCCceEEEEEecCCCc-----eeEEE----eccceeEeecccccCCcEEEecCCCceEEEEehhhccc-------
Confidence 889999999999999876421 12232 6888999999987 566788999999999999752110
Q ss_pred cceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEE
Q 018675 256 SWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLA 335 (352)
Q Consensus 256 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~ 335 (352)
.+.++.+|+..|..+.|||....+||
T Consensus 226 ------------------------------------------------------pl~eL~gh~~AVRkvk~Sph~~~lLa 251 (311)
T KOG0277|consen 226 ------------------------------------------------------PLFELNGHGLAVRKVKFSPHHASLLA 251 (311)
T ss_pred ------------------------------------------------------cceeecCCceEEEEEecCcchhhHhh
Confidence 01234689999999999999888999
Q ss_pred EecCCCeEEEEeecc
Q 018675 336 SASDDGMIKIWELAN 350 (352)
Q Consensus 336 s~~~Dg~i~iw~~~~ 350 (352)
|++.|=++|||+..+
T Consensus 252 SasYDmT~riw~~~~ 266 (311)
T KOG0277|consen 252 SASYDMTVRIWDPER 266 (311)
T ss_pred hccccceEEeccccc
Confidence 999999999999874
No 62
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.97 E-value=2.7e-28 Score=215.57 Aligned_cols=281 Identities=22% Similarity=0.357 Sum_probs=212.4
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEE-EEECC-CCCEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRS-CAWSP-SGKLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~-~~~s~-~~~~l 89 (352)
+.-.++.||+..|..+++.+. -.++++|.|+++++|+..... |.....+ ..|.+.|.. +++.+ ++-.|
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~-------~~i~s~sRd~t~~vw~~~~~~--~l~~~~~-~~~~g~i~~~i~y~e~~~~~l 74 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDG-------VCIISGSRDGTVKVWAKKGKQ--YLETHAF-EGPKGFIANSICYAESDKGRL 74 (745)
T ss_pred eeEEEeccCccchheeEecCC-------eEEeecCCCCceeeeeccCcc--cccceec-ccCcceeeccceeccccCcce
Confidence 344678899999998887663 479999999999999875432 2222222 335555555 66665 55569
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
++|+.|.++.+|...+. .+..++.+|.+.|+|++...++. +++||+|.++++|.+. ++...+.+|+..|+++
T Consensus 75 ~~g~~D~~i~v~~~~~~--~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~-----~l~~~l~gH~asVWAv 146 (745)
T KOG0301|consen 75 VVGGMDTTIIVFKLSQA--EPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG-----ELVYSLQGHTASVWAV 146 (745)
T ss_pred EeecccceEEEEecCCC--CchhhhhccccceeeeecCCcCc-eEecccccceEEecch-----hhhcccCCcchheeee
Confidence 99999999999976544 57889999999999999877776 8999999999999863 2345689999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc
Q 018675 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (352)
..-|++ .+++|+.|.+|++|.-. .+++ ...+|...|..|++-+++ .++||+.||.|++|++......
T Consensus 147 ~~l~e~-~~vTgsaDKtIklWk~~-------~~l~----tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~ge~l~ 213 (745)
T KOG0301|consen 147 ASLPEN-TYVTGSADKTIKLWKGG-------TLLK----TFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDGEVLL 213 (745)
T ss_pred eecCCC-cEEeccCcceeeeccCC-------chhh----hhccchhheeeeEEecCC-CeEeecCCceEEEEeccCceee
Confidence 999987 68999999999999431 1222 345899999999998775 4789999999999987422111
Q ss_pred cCCCCccceeeEEeecccCcceEEEE-ecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccC-cceeEEEec
Q 018675 250 SGDGYASWRHLCTISGYHDRTIFSVH-WSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHD-MDVNSVQWS 327 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~s 327 (352)
. ...|.+-+++++ ..+++.+++++.|+++++|... ++.+. ..|. -.|.++.+.
T Consensus 214 ------------~-~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~-----------e~~q~-I~lPttsiWsa~~L 268 (745)
T KOG0301|consen 214 ------------E-MHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD-----------ECVQV-ITLPTTSIWSAKVL 268 (745)
T ss_pred ------------e-eeccceEEEEEEecCCCCeEEEecCCceEEEeecC-----------ceEEE-EecCccceEEEEEe
Confidence 1 123666788888 5557799999999999999543 12221 1232 368999988
Q ss_pred CCCcceEEEecCCCeEEEEeecc
Q 018675 328 PGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 328 p~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
++|. +++|+.||.||||...+
T Consensus 269 ~NgD--Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 269 LNGD--IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred eCCC--EEEeccCceEEEEEecc
Confidence 8886 56899999999999864
No 63
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=1.2e-29 Score=207.55 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=195.5
Q ss_pred cccCCcccee------eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecc
Q 018675 3 FLDDGNYELR------EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRT 76 (352)
Q Consensus 3 ~~~~~~~~~~------~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~ 76 (352)
+++|+.+++. ++..|.||++.|.|+.|.. ..++|||.|.+|++||+++++.+... ..|...
T Consensus 213 GlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--------rviisGSSDsTvrvWDv~tge~l~tl-----ihHcea 279 (499)
T KOG0281|consen 213 GLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--------RVIVSGSSDSTVRVWDVNTGEPLNTL-----IHHCEA 279 (499)
T ss_pred ccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--------eEEEecCCCceEEEEeccCCchhhHH-----hhhcce
Confidence 4566666643 3456789999999999864 48999999999999999988654221 347889
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCC-ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEE
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGG-DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 155 (352)
|..+.|+. .++++++.|.++++||.... +..+..++.||..+|+.+.|+. +++++++.|++|++|++... ++
T Consensus 280 VLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~--kyIVsASgDRTikvW~~st~---ef 352 (499)
T KOG0281|consen 280 VLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTC---EF 352 (499)
T ss_pred eEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc--ceEEEecCCceEEEEeccce---ee
Confidence 99999984 58999999999999997543 3334456789999999999865 59999999999999998654 57
Q ss_pred EEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC
Q 018675 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235 (352)
Q Consensus 156 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d 235 (352)
+.++.+|...|.|+++ .++++++||.|.+|++|++... .|+.- ..||+.-|.++.|+ .+.+++|+-|
T Consensus 353 vRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G-----~cLRv----LeGHEeLvRciRFd--~krIVSGaYD 419 (499)
T KOG0281|consen 353 VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG-----ACLRV----LEGHEELVRCIRFD--NKRIVSGAYD 419 (499)
T ss_pred ehhhhcccccceehhc--cCeEEEecCCCceEEEEecccc-----HHHHH----HhchHHhhhheeec--Cceeeecccc
Confidence 8889999999999887 5789999999999999987543 23322 34899999999996 5569999999
Q ss_pred CcEEEEcCCccccccCCCCccceeeEEe-ecccCcceEEEEecCCceEEecCCCCeEEEEEcc
Q 018675 236 LTIKIWGADITRMQSGDGYASWRHLCTI-SGYHDRTIFSVHWSREGIIASGAADDSVQFFVES 297 (352)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~ 297 (352)
|+||+||+........ .-..+|-. ...|.+.++.+.|+. -.+++++.|.+|.+|+.-
T Consensus 420 GkikvWdl~aaldpra----~~~~~Cl~~lv~hsgRVFrLQFD~-fqIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 420 GKIKVWDLQAALDPRA----PASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTILIWDFL 477 (499)
T ss_pred ceEEEEecccccCCcc----cccchHHHhhhhccceeEEEeecc-eEEEeccCCCeEEEEEcC
Confidence 9999999864321110 00011111 123566788887753 357888899999999653
No 64
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.97 E-value=5.7e-28 Score=213.49 Aligned_cols=310 Identities=23% Similarity=0.420 Sum_probs=234.4
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecce--ecceEEEEECCCCCEEEEEeC
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH--TRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~~~ 94 (352)
+.||.+.|+++.|+|. +..|+|+|.|+++.+|..++...+|.....+...- ...-..+-|+|++..+++-+.
T Consensus 263 l~GHeDWV~sv~W~p~------~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~ 336 (764)
T KOG1063|consen 263 LMGHEDWVYSVWWHPE------GLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGR 336 (764)
T ss_pred hcCcccceEEEEEccc------hhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecc
Confidence 5699999999999997 45799999999999999988877887655443322 234678899999999999999
Q ss_pred CCcEEEEEcc-CCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC-CCCeeEEEEEeecCccCeeEEEEc
Q 018675 95 DATTCIWEDV-GGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM-PGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 95 d~~i~i~~~~-~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~-~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
-|..++|... ...+.......||.+.|+.++|.|.|++|+++|.|.|-+++-.- ....+..+...+-|...++|+++-
T Consensus 337 ~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~v 416 (764)
T KOG1063|consen 337 TGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFV 416 (764)
T ss_pred cCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehc
Confidence 9999999722 22334445567999999999999999999999999999998642 122344555566788899999998
Q ss_pred CCCCEEEEEeCCCcEEEEecCCC--------------CC------------------------CC----ceeEeee----
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDT--------------DS------------------------DN----WHCVQTI---- 206 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~--------------~~------------------------~~----~~~~~~~---- 206 (352)
+....+++|.+...+++|..... +. +. ..+.++.
T Consensus 417 n~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~ 496 (764)
T KOG1063|consen 417 NEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAA 496 (764)
T ss_pred cCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccC
Confidence 86667889999999999844210 00 00 0000000
Q ss_pred ---------------------eccCCCCcccEEEEEEcCCCCEEEEEeCCC-----cEEEEcCCccccccCCCCccceee
Q 018675 207 ---------------------SESNNGHSSTIWALSFNAKGDKLVSCSDDL-----TIKIWGADITRMQSGDGYASWRHL 260 (352)
Q Consensus 207 ---------------------~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~ 260 (352)
.....||+..|++++.+|+++++||++... .|++|... .|.+.
T Consensus 497 p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~-----------~W~~~ 565 (764)
T KOG1063|consen 497 PCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTA-----------NWLQV 565 (764)
T ss_pred chhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEecc-----------chhhh
Confidence 012368999999999999999999998654 68899653 34333
Q ss_pred EEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecC
Q 018675 261 CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 339 (352)
Q Consensus 261 ~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~ 339 (352)
..+ ..|+-+|+.+.|+|++ +|++++.|.++.+|...++..... . ......|..-|.+++|+|++.+ |+|+|.
T Consensus 566 ~~L-~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~-~----fa~~k~HtRIIWdcsW~pde~~-FaTaSR 638 (764)
T KOG1063|consen 566 QEL-EGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEF-R----FACLKAHTRIIWDCSWSPDEKY-FATASR 638 (764)
T ss_pred hee-cccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhh-h----hccccccceEEEEcccCcccce-eEEecC
Confidence 322 3588899999999987 899999999999997644322111 1 2235689999999999999874 899999
Q ss_pred CCeEEEEeecc
Q 018675 340 DGMIKIWELAN 350 (352)
Q Consensus 340 Dg~i~iw~~~~ 350 (352)
|++|+||....
T Consensus 639 DK~VkVW~~~~ 649 (764)
T KOG1063|consen 639 DKKVKVWEEPD 649 (764)
T ss_pred CceEEEEeccC
Confidence 99999999764
No 65
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=5.9e-28 Score=204.18 Aligned_cols=305 Identities=22% Similarity=0.259 Sum_probs=224.7
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee---eee----------eeeeecceecceEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF---WNC----------KAVLEEMHTRTVRSC 80 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~---~~~----------~~~~~~~h~~~v~~~ 80 (352)
+..+..|.-.|.|++++|++ ++.++++.|++|.-|+..+++.. +.. ...-++.|.+.+.++
T Consensus 135 ~~~~~~H~~s~~~vals~d~------~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~ 208 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDD------KRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTL 208 (479)
T ss_pred ceeeccccCcceEEEeeccc------cceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEE
Confidence 45677899999999999984 78999999999999998776532 111 011112678889999
Q ss_pred EECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEee
Q 018675 81 AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160 (352)
Q Consensus 81 ~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 160 (352)
+.++||++||+|+.|..+.||+..+. +++..+.+|.+.|.+++|-.....+++++.|+++++|++.. ...+.++.
T Consensus 209 avS~Dgkylatgg~d~~v~Iw~~~t~--ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~---~s~vetly 283 (479)
T KOG0299|consen 209 AVSSDGKYLATGGRDRHVQIWDCDTL--EHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ---LSYVETLY 283 (479)
T ss_pred EEcCCCcEEEecCCCceEEEecCccc--chhhcccccccceeeeeeecCccceeeeecCCceEEEehhH---hHHHHHHh
Confidence 99999999999999999999998765 56777899999999999988888899999999999999853 23456788
Q ss_pred cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEE
Q 018675 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240 (352)
Q Consensus 161 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~i 240 (352)
+|+..|..+....-++.+-+|+.|+++++|++.+.. +.+ ..+|...+-+++|-.+ ..+++|+.+|.|.+
T Consensus 284 GHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees-------qli---frg~~~sidcv~~In~-~HfvsGSdnG~IaL 352 (479)
T KOG0299|consen 284 GHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEES-------QLI---FRGGEGSIDCVAFIND-EHFVSGSDNGSIAL 352 (479)
T ss_pred CCccceeeechhcccceEEeccccceeEEEeccccc-------eee---eeCCCCCeeeEEEecc-cceeeccCCceEEE
Confidence 999999999888777777778899999999885432 111 2367788999998655 56899999999999
Q ss_pred EcCCccccccCC--CCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeeccccc
Q 018675 241 WGADITRMQSGD--GYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH 317 (352)
Q Consensus 241 wd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h 317 (352)
|++-..+..... .+......... .+...|.+++.-+. .++++|+.+|.+++|....+- ....++... .-
T Consensus 353 Ws~~KKkplf~~~~AHgv~~~~~~~--~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~-----r~i~~l~~l-s~ 424 (479)
T KOG0299|consen 353 WSLLKKKPLFTSRLAHGVIPELDPV--NGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGL-----RAINLLYSL-SL 424 (479)
T ss_pred eeecccCceeEeeccccccCCcccc--ccccceeeeEecccCceEEecCCCCceEEEEecCCc-----cccceeeec-cc
Confidence 987543321110 00000000000 01125777766664 589999999999999765431 112233333 25
Q ss_pred CcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 318 DMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 318 ~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.+.|++++|+++|++++|..|....+==|-.
T Consensus 425 ~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~ 455 (479)
T KOG0299|consen 425 VGFVNSLAFSNSGKRIVAGIGKEHRLGRWWC 455 (479)
T ss_pred ccEEEEEEEccCCCEEEEecccccccceeeE
Confidence 6789999999999988888887765544543
No 66
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2.7e-27 Score=190.90 Aligned_cols=275 Identities=22% Similarity=0.437 Sum_probs=198.5
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEEEEEeCC
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLLATASFD 95 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~d 95 (352)
.+|.+-|.|+.|.+. |..+||||.|++++||+.......|.+.... +.|.++|..+.|.+ =|+.+|+++.|
T Consensus 10 s~h~DlihdVs~D~~------GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~W-rah~~Si~rV~WAhPEfGqvvA~cS~D 82 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFY------GRRMATCSSDQTVKIWDSTSDSGTWSCTSSW-RAHDGSIWRVVWAHPEFGQVVATCSYD 82 (361)
T ss_pred cCCcceeeeeeeccc------CceeeeccCCCcEEEEeccCCCCceEEeeeE-EecCCcEEEEEecCccccceEEEEecC
Confidence 489999999999886 6899999999999999987777777777666 45999999999965 48999999999
Q ss_pred CcEEEEEccC-------CceeeeEeeccccCCeeEEEECC--CCcEEEEeeCCCcEEEEecCCCCee---EEEEEe----
Q 018675 96 ATTCIWEDVG-------GDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPGNEF---ECVSVL---- 159 (352)
Q Consensus 96 ~~i~i~~~~~-------~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~---~~~~~~---- 159 (352)
+++.||.... .++....++....+.|+.|.|.| -|-.+++++.||.+++|+....... ...+.+
T Consensus 83 rtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~ 162 (361)
T KOG2445|consen 83 RTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVI 162 (361)
T ss_pred CceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhcc
Confidence 9999997521 13444566666778999999998 4678999999999999997533211 111112
Q ss_pred ---ecCccCeeEEEEcCC---CCEEEEEeCC-----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC---
Q 018675 160 ---QGHAQDVKMVQWHPT---MDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--- 225 (352)
Q Consensus 160 ---~~h~~~v~~~~~~~~---~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~--- 225 (352)
..+.....|+.|+|. .++++.|+.+ +.+.||...+. .+.|..+.++ .+|+.+|.+|+|.|+
T Consensus 163 ~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~-~rKw~kva~L----~d~~dpI~di~wAPn~Gr 237 (361)
T KOG2445|consen 163 DPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNEN-GRKWLKVAEL----PDHTDPIRDISWAPNIGR 237 (361)
T ss_pred CCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCC-cceeeeehhc----CCCCCcceeeeeccccCC
Confidence 245567789999975 4567777655 47889965432 2344444433 489999999999996
Q ss_pred -CCEEEEEeCCCcEEEEcCCccccc-cCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCcccc
Q 018675 226 -GDKLVSCSDDLTIKIWGADITRMQ-SGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLID 303 (352)
Q Consensus 226 -~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~ 303 (352)
...||+++.|| |+||.+...+.. ..++ +. .++. -..
T Consensus 238 ~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee-----------------~~----~~~~-------~~~------------- 275 (361)
T KOG2445|consen 238 SYHLLAVATKDG-VRIFKVKVARSAIEEEE-----------------VL----APDL-------MTD------------- 275 (361)
T ss_pred ceeeEEEeecCc-EEEEEEeeccchhhhhc-----------------cc----CCCC-------ccc-------------
Confidence 34689999999 999976532110 0000 00 0000 000
Q ss_pred CcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 304 ~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
..-+++.++..|++.|..+.|+=.|. +|+|.|.||.||+|...
T Consensus 276 --l~v~~vs~~~~H~~~VWrv~wNmtGt-iLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 276 --LPVEKVSELDDHNGEVWRVRWNMTGT-ILSSTGDDGCVRLWKAN 318 (361)
T ss_pred --cceEEeeeccCCCCceEEEEEeeeee-EEeecCCCceeeehhhh
Confidence 11123445678999999999998885 79999999999999753
No 67
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.96 E-value=2.9e-27 Score=198.70 Aligned_cols=285 Identities=19% Similarity=0.293 Sum_probs=217.2
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~ 101 (352)
..+.++...|. .+.++||+.|+++.++|...+..+. ....|...|+.+.|+|+...+++++.|..|++|
T Consensus 220 pgi~ald~~~s------~~~ilTGG~d~~av~~d~~s~q~l~-----~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vw 288 (506)
T KOG0289|consen 220 PGITALDIIPS------SSKILTGGEDKTAVLFDKPSNQILA-----TLKGHTKKITSVKFHKDLDTVITASADEIIRVW 288 (506)
T ss_pred CCeeEEeecCC------CCcceecCCCCceEEEecchhhhhh-----hccCcceEEEEEEeccchhheeecCCcceEEee
Confidence 46777777775 2579999999999999987654322 225688999999999999999999999999999
Q ss_pred EccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEE
Q 018675 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181 (352)
Q Consensus 102 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 181 (352)
...... +......|.++|+.+..+|.|++|++++.|++..+.|++.+..+..+.. ....-.+++++||||+-++.+|
T Consensus 289 s~~~~s--~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~-~~s~v~~ts~~fHpDgLifgtg 365 (506)
T KOG0289|consen 289 SVPLSS--EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSD-ETSDVEYTSAAFHPDGLIFGTG 365 (506)
T ss_pred cccccc--CccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEee-ccccceeEEeeEcCCceEEecc
Confidence 865442 4456678999999999999999999999999999999987765432221 1223458899999999999999
Q ss_pred eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeE
Q 018675 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLC 261 (352)
Q Consensus 182 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 261 (352)
..|+.++|||+.+... .....+|..+|.+++|+-+|.+||++++|+.|++||++..+. ..
T Consensus 366 t~d~~vkiwdlks~~~---------~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n-----------~k 425 (506)
T KOG0289|consen 366 TPDGVVKIWDLKSQTN---------VAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN-----------FK 425 (506)
T ss_pred CCCceEEEEEcCCccc---------cccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc-----------cc
Confidence 9999999998866431 123458999999999999999999999999999999874321 11
Q ss_pred EeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCC
Q 018675 262 TISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDD 340 (352)
Q Consensus 262 ~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~D 340 (352)
++.......+.++++++.| +++.++.+=.|+.+... ...+.+ +.....|.+..+.+.|.... ++++++|.|
T Consensus 426 t~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~------~k~W~~-~~~~~~~sg~st~v~Fg~~a-q~l~s~smd 497 (506)
T KOG0289|consen 426 TIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKK------TKSWTE-IKELADHSGLSTGVRFGEHA-QYLASTSMD 497 (506)
T ss_pred eeeccccccceeEEEcCCCCeEEeecceeEEEEEecc------ccccee-eehhhhcccccceeeecccc-eEEeeccch
Confidence 2222223357888888877 66666555555544221 122222 34556788889999998766 578999999
Q ss_pred CeEEEEee
Q 018675 341 GMIKIWEL 348 (352)
Q Consensus 341 g~i~iw~~ 348 (352)
..++++.+
T Consensus 498 ~~l~~~a~ 505 (506)
T KOG0289|consen 498 AILRLYAL 505 (506)
T ss_pred hheEEeec
Confidence 99999865
No 68
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.96 E-value=6.5e-27 Score=184.61 Aligned_cols=288 Identities=27% Similarity=0.441 Sum_probs=210.4
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-CCCEEEEEe
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLLATAS 93 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~ 93 (352)
..+++|...|.+++|+.+ +..|++++.|+++++|+++.... .+......|.+.|-.+.|+| +...+++++
T Consensus 14 r~~~~~~~~v~Sv~wn~~------g~~lasgs~dktv~v~n~e~~r~---~~~~~~~gh~~svdql~w~~~~~d~~atas 84 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCD------GTKLASGSFDKTVSVWNLERDRF---RKELVYRGHTDSVDQLCWDPKHPDLFATAS 84 (313)
T ss_pred HHhhhhhhcceEEEEccc------CceeeecccCCceEEEEecchhh---hhhhcccCCCcchhhheeCCCCCcceEEec
Confidence 457799999999999987 57899999999999999876532 12223356888888888987 567899999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.|.+|++||...++ +....... ++-.-+.|+|+|++++.++.|..|.+.|.+..+. ....+ ....+.-+.|+.
T Consensus 85 ~dk~ir~wd~r~~k--~~~~i~~~-~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~---~~~~~-~~~e~ne~~w~~ 157 (313)
T KOG1407|consen 85 GDKTIRIWDIRSGK--CTARIETK-GENINITWSPDGEYIAVGNKDDRITFIDARTYKI---VNEEQ-FKFEVNEISWNN 157 (313)
T ss_pred CCceEEEEEeccCc--EEEEeecc-CcceEEEEcCCCCEEEEecCcccEEEEEecccce---eehhc-ccceeeeeeecC
Confidence 99999999998774 34444332 3334588999999999999999999999865432 22211 223566778887
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCC
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG 253 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (352)
++.+++.....|.|.|..... ++.++++ ++|.....++.|+|+|+|||+|+.|..+-+||++..-.
T Consensus 158 ~nd~Fflt~GlG~v~ILsyps-----Lkpv~si----~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC----- 223 (313)
T KOG1407|consen 158 SNDLFFLTNGLGCVEILSYPS-----LKPVQSI----KAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELIC----- 223 (313)
T ss_pred CCCEEEEecCCceEEEEeccc-----ccccccc----ccCCcceEEEEECCCCceEeeccccceeeccChhHhhh-----
Confidence 788887777789998874332 2333333 48999999999999999999999999999999752100
Q ss_pred CccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcc
Q 018675 254 YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR 332 (352)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~ 332 (352)
.+ ....++-+|..++|+.++ +||+++.|-.|-+-....++ .+. ...+.++-+.++|+|.. .
T Consensus 224 ---~R----~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd--------~~~--eI~~~~~t~tVAWHPk~-~ 285 (313)
T KOG1407|consen 224 ---ER----CISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGD--------RVW--EIPCEGPTFTVAWHPKR-P 285 (313)
T ss_pred ---he----eeccccCceEEEEeccCcceeeccCccceEEeEecccCC--------eEE--EeeccCCceeEEecCCC-c
Confidence 01 112345678889999876 89999999888765433221 111 13577889999999975 5
Q ss_pred eEEEecCC---------CeEEEEeecc
Q 018675 333 LLASASDD---------GMIKIWELAN 350 (352)
Q Consensus 333 ~l~s~~~D---------g~i~iw~~~~ 350 (352)
+||-+..| |++|||-+.+
T Consensus 286 LLAyA~ddk~~d~~reag~vKiFG~~~ 312 (313)
T KOG1407|consen 286 LLAYACDDKDGDSNREAGTVKIFGLSN 312 (313)
T ss_pred eeeEEecCCCCccccccceeEEecCCC
Confidence 77766655 6788876543
No 69
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2.4e-28 Score=190.95 Aligned_cols=257 Identities=27% Similarity=0.494 Sum_probs=198.5
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEEEEEeCC
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLLATASFD 95 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~d 95 (352)
.+|.+.|..+...- .++.|||||.|++|+|+....+.... ....+ ..|.++|.-++|.. -|.+||+++.|
T Consensus 8 t~H~D~IHda~lDy------ygkrlATcsSD~tVkIf~v~~n~~s~-ll~~L-~Gh~GPVwqv~wahPk~G~iLAScsYD 79 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDY------YGKRLATCSSDGTVKIFEVRNNGQSK-LLAEL-TGHSGPVWKVAWAHPKFGTILASCSYD 79 (299)
T ss_pred hhhhhhhhHhhhhh------hcceeeeecCCccEEEEEEcCCCCce-eeeEe-cCCCCCeeEEeecccccCcEeeEeecC
Confidence 47888888765433 36899999999999999987665311 11222 46999999999965 79999999999
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
|.+.||...++.+........|...|++++|.|. |-.|++++.||+|.|.+..............+|...|+++.|.|
T Consensus 80 gkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswap 159 (299)
T KOG1332|consen 80 GKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAP 159 (299)
T ss_pred ceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecC
Confidence 9999999888877777777889999999999885 56899999999999999876544444456778999999999998
Q ss_pred C---C-----------CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC----CEEEEEeCC
Q 018675 174 T---M-----------DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG----DKLVSCSDD 235 (352)
Q Consensus 174 ~---~-----------~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~----~~l~s~~~d 235 (352)
- + ..|++|+-|+.|+||+..+. +|....+ +.+|...|..++|.|.- .+||+|+.|
T Consensus 160 a~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~---~w~~e~~----l~~H~dwVRDVAwaP~~gl~~s~iAS~SqD 232 (299)
T KOG1332|consen 160 ASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD---SWKLERT----LEGHKDWVRDVAWAPSVGLPKSTIASCSQD 232 (299)
T ss_pred cCCCccccccCcccccceeeccCCccceeeeecCCc---chhhhhh----hhhcchhhhhhhhccccCCCceeeEEecCC
Confidence 5 3 45899999999999976543 4443333 34899999999999963 579999999
Q ss_pred CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 236 LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
|++.||..+. ....|+. ++.......+++++|+..+ .|+.++.|+.+.+|....
T Consensus 233 g~viIwt~~~-------e~e~wk~--tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 233 GTVIIWTKDE-------EYEPWKK--TLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred CcEEEEEecC-------ccCcccc--cccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 9999996541 1122321 1222245678999999976 777888899999996543
No 70
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.6e-27 Score=208.67 Aligned_cols=267 Identities=25% Similarity=0.418 Sum_probs=203.8
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecc-cc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG-HE 118 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~-h~ 118 (352)
..+|.| -+..|.+|+..++.. ..+...+...|+++.|+++|++|++|..+|.+.|||.... ..+..+.+ |.
T Consensus 189 n~laVa-lg~~vylW~~~s~~v-----~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~--k~~~~~~~~h~ 260 (484)
T KOG0305|consen 189 NVLAVA-LGQSVYLWSASSGSV-----TELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ--KKTRTLRGSHA 260 (484)
T ss_pred CeEEEE-ecceEEEEecCCCce-----EEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc--cccccccCCcC
Confidence 466665 467899999876642 1122334689999999999999999999999999997654 23455666 99
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 198 (352)
..|-+++|+ +..+.+|+.|+.|..+|++..+... ..+.+|.+.|+.+.|++++.++++|+.|+.+.|||.....
T Consensus 261 ~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~--~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~-- 334 (484)
T KOG0305|consen 261 SRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV--STLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE-- 334 (484)
T ss_pred ceeEEEecc--CceEEEecCCCcEEEEEEecchhhh--hhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc--
Confidence 999999998 5678999999999999997654322 2478899999999999999999999999999999863321
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEe--CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEE
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCS--DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVH 275 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 275 (352)
....+ ..|...|.+++|+|- ..+||+|+ .|+.|++|+........ . ......|.++.
T Consensus 335 ---p~~~~----~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~-----------~--vdtgsQVcsL~ 394 (484)
T KOG0305|consen 335 ---PKFTF----TEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARID-----------S--VDTGSQVCSLI 394 (484)
T ss_pred ---ccEEE----eccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEec-----------c--cccCCceeeEE
Confidence 12222 369999999999995 56788764 79999999976432211 0 11345688899
Q ss_pred ecCCc--eEE-ecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 276 WSREG--IIA-SGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 276 ~~~~~--~~~-s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|++.. ++. -|-.++.+.+|.... ...+....+|...|..+++|||+. .++||+.|.++++|++..
T Consensus 395 Wsk~~kEi~sthG~s~n~i~lw~~ps---------~~~~~~l~gH~~RVl~la~SPdg~-~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 395 WSKKYKELLSTHGYSENQITLWKYPS---------MKLVAELLGHTSRVLYLALSPDGE-TIVTGAADETLRFWNLFD 462 (484)
T ss_pred EcCCCCEEEEecCCCCCcEEEEeccc---------cceeeeecCCcceeEEEEECCCCC-EEEEecccCcEEeccccC
Confidence 99875 443 344466789996643 123445689999999999999987 578999999999999854
No 71
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.5e-25 Score=173.70 Aligned_cols=304 Identities=23% Similarity=0.351 Sum_probs=214.9
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCC------Cc-eeeeeee---eeecceecceEE
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA------SS-RFWNCKA---VLEEMHTRTVRS 79 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~------~~-~~~~~~~---~~~~~h~~~v~~ 79 (352)
+++.+..|+ -+..|.+++|+|. +.+.|.||+.+++|+-.... .- ....++. ...+.|.+.|+|
T Consensus 22 ~f~~i~~l~-dsqairav~fhp~------g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc 94 (350)
T KOG0641|consen 22 HFEAINILE-DSQAIRAVAFHPA------GGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYC 94 (350)
T ss_pred ceEEEEEec-chhheeeEEecCC------CceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEE
Confidence 356666665 5679999999997 57899999999999864211 10 0001111 112458899999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEccCCcee---eeEeeccccCCeeEEEECC----CCcEEEEee-CCCcEEEEecCCCC
Q 018675 80 CAWSPSGKLLATASFDATTCIWEDVGGDYE---CVATLEGHENEVKSVSWNA----SGTLLATCG-RDKSVWIWEVMPGN 151 (352)
Q Consensus 80 ~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~---~~~~~~~h~~~v~~v~~~~----~~~~l~s~~-~d~~v~vwd~~~~~ 151 (352)
.+|+|.|++|++|++|.+|++........+ .-..+.-|.+.|+.++|-. .+.+|++++ .|..|.+-|-..+.
T Consensus 95 ~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~ 174 (350)
T KOG0641|consen 95 TAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ 174 (350)
T ss_pred EEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC
Confidence 999999999999999999998743322111 1234567899999999953 234566654 45666666655443
Q ss_pred eeEEEEEeecCccCeeEE-EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCC---CcccEEEEEEcCCCC
Q 018675 152 EFECVSVLQGHAQDVKMV-QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNG---HSSTIWALSFNAKGD 227 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~-~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~---h~~~i~~l~~~~~~~ 227 (352)
....+.+|+.-|.++ .| ++-++++|+.|.+|++||++-. .++.++.....+ ..+.|.+++..|.|+
T Consensus 175 ---~~~a~sghtghilalysw--n~~m~~sgsqdktirfwdlrv~-----~~v~~l~~~~~~~glessavaav~vdpsgr 244 (350)
T KOG0641|consen 175 ---GFHALSGHTGHILALYSW--NGAMFASGSQDKTIRFWDLRVN-----SCVNTLDNDFHDGGLESSAVAAVAVDPSGR 244 (350)
T ss_pred ---cceeecCCcccEEEEEEe--cCcEEEccCCCceEEEEeeecc-----ceeeeccCcccCCCcccceeEEEEECCCcc
Confidence 456788999888765 44 4678999999999999987543 233333222111 136899999999999
Q ss_pred EEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcc
Q 018675 228 KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPS 306 (352)
Q Consensus 228 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~ 306 (352)
+|++|-.|....+||++-.++. ..+. .|...|.++.|+|+. ++++++.|..|++-+... ++.
T Consensus 245 ll~sg~~dssc~lydirg~r~i-----------q~f~-phsadir~vrfsp~a~yllt~syd~~ikltdlqg-dla---- 307 (350)
T KOG0641|consen 245 LLASGHADSSCMLYDIRGGRMI-----------QRFH-PHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG-DLA---- 307 (350)
T ss_pred eeeeccCCCceEEEEeeCCcee-----------eeeC-CCccceeEEEeCCCceEEEEecccceEEEeeccc-chh----
Confidence 9999999999999998754432 2222 367789999999975 899999999999985533 121
Q ss_pred cceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 307 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 307 ~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
....+.....|...+..+.|+|.+- -+++.+.|+++.+|.+
T Consensus 308 ~el~~~vv~ehkdk~i~~rwh~~d~-sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 308 HELPIMVVAEHKDKAIQCRWHPQDF-SFISSSADKTATLWAL 348 (350)
T ss_pred hcCceEEEEeccCceEEEEecCccc-eeeeccCcceEEEecc
Confidence 1111222356888899999999875 4679999999999975
No 72
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.1e-27 Score=216.49 Aligned_cols=259 Identities=18% Similarity=0.308 Sum_probs=184.3
Q ss_pred eeeeeec-CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc----------------------------e-
Q 018675 12 REIQTLE-GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS----------------------------R- 61 (352)
Q Consensus 12 ~~~~~~~-gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~----------------------------~- 61 (352)
...+.+. +|.+.|+++.|+++ |++|||||.|+.||||.+.... .
T Consensus 257 ~~~Qe~~~ah~gaIw~mKFS~D------GKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~ 330 (712)
T KOG0283|consen 257 TVVQEISNAHKGAIWAMKFSHD------GKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEE 330 (712)
T ss_pred EEeeccccccCCcEEEEEeCCC------CceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccc
Confidence 3445666 89999999999997 7999999999999999865400 0
Q ss_pred ------------eeeee--------------eeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec
Q 018675 62 ------------FWNCK--------------AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE 115 (352)
Q Consensus 62 ------------~~~~~--------------~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~ 115 (352)
...+. ......|.+.|..++||.+ ++|++++.|.+++||+.... .|+..+
T Consensus 331 ~~~~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~--~CL~~F- 406 (712)
T KOG0283|consen 331 KISSRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRK--ECLKVF- 406 (712)
T ss_pred cccccccccccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCc--ceeeEE-
Confidence 00000 0001258899999999965 68899999999999987654 567776
Q ss_pred cccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCC
Q 018675 116 GHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAED 194 (352)
Q Consensus 116 ~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 194 (352)
.|..-|+||+|+| |.++|++|+-|++|++|.+...+ +.....-..-|++++|.|+|+..+.|+.+|.+++|+..+
T Consensus 407 ~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~----Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~ 482 (712)
T KOG0283|consen 407 SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK----VVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEG 482 (712)
T ss_pred ecCCeeEEEEecccCCCcEeecccccceEEeecCcCe----eEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccC
Confidence 4999999999999 77899999999999999997543 222222236799999999999999999999999997665
Q ss_pred CCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeeccc-CcceE
Q 018675 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH-DRTIF 272 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~ 272 (352)
.....-..+..-......|. .|+.+.|.|. -..++..+.|.+|||+|.+...+ .+.+.+++ .+.-.
T Consensus 483 lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~l-----------v~KfKG~~n~~SQ~ 550 (712)
T KOG0283|consen 483 LKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDL-----------VHKFKGFRNTSSQI 550 (712)
T ss_pred CeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhh-----------hhhhcccccCCcce
Confidence 32111111111111222344 8999999974 34577788999999999843222 12222221 22233
Q ss_pred EEEecCC-ceEEecCCCCeEEEEEc
Q 018675 273 SVHWSRE-GIIASGAADDSVQFFVE 296 (352)
Q Consensus 273 ~~~~~~~-~~~~s~~~d~~v~~~~~ 296 (352)
+..++.+ .+|++++.|..|++|..
T Consensus 551 ~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 551 SASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred eeeEccCCCEEEEeecCceEEEEeC
Confidence 3445554 48999999999999975
No 73
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=6.3e-28 Score=218.04 Aligned_cols=246 Identities=21% Similarity=0.379 Sum_probs=183.0
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCC-----------------------------c---------------
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG-----------------------------D--------------- 107 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~-----------------------------~--------------- 107 (352)
.|.++|.++.||+||++||+|+.|+.|+||..... .
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 69999999999999999999999999999975440 0
Q ss_pred --------------eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 108 --------------YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 108 --------------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
..+...+.||.+.|..++|+.+ ++|+++|.|+||++|++... .|+.++ .|..-|+|++|+|
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~---~CL~~F-~HndfVTcVaFnP 419 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRK---ECLKVF-SHNDFVTCVAFNP 419 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCc---ceeeEE-ecCCeeEEEEecc
Confidence 0123456789999999999986 58899999999999998532 456554 5899999999999
Q ss_pred -CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCC
Q 018675 174 -TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252 (352)
Q Consensus 174 -~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (352)
|++++++|+-|+.++||.+.+..-.-|.- ...-|++++|.|+|++.+.|+-+|.+++|+..-.++....
T Consensus 420 vDDryFiSGSLD~KvRiWsI~d~~Vv~W~D----------l~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~ 489 (712)
T KOG0283|consen 420 VDDRYFISGSLDGKVRLWSISDKKVVDWND----------LRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDF 489 (712)
T ss_pred cCCCcEeecccccceEEeecCcCeeEeehh----------hhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEee
Confidence 67899999999999999887643222211 2367999999999999999999999999987543332110
Q ss_pred CCccceeeEEe--ecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccceeeecccccC--cceeEEEe
Q 018675 253 GYASWRHLCTI--SGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHD--MDVNSVQW 326 (352)
Q Consensus 253 ~~~~~~~~~~~--~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~i~~~~~ 326 (352)
++... .......|+.+.+.+.. .++..+.|..|++++....+ ++.++.|+. ..=...+|
T Consensus 490 ------~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~---------lv~KfKG~~n~~SQ~~Asf 554 (712)
T KOG0283|consen 490 ------HIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKD---------LVHKFKGFRNTSSQISASF 554 (712)
T ss_pred ------eEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchh---------hhhhhcccccCCcceeeeE
Confidence 11000 00011257777777653 58888899999999653322 233344332 23356789
Q ss_pred cCCCcceEEEecCCCeEEEEee
Q 018675 327 SPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
++||+ .|+++++|..|.||+.
T Consensus 555 s~Dgk-~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 555 SSDGK-HIVSASEDSWVYIWKN 575 (712)
T ss_pred ccCCC-EEEEeecCceEEEEeC
Confidence 99987 5789999999999997
No 74
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=5.5e-27 Score=189.64 Aligned_cols=247 Identities=23% Similarity=0.423 Sum_probs=183.5
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC--
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-- 87 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-- 87 (352)
.+..+..+..|...|++++.+ ++++||||.|-+|+|||+....++... -.|.+.|+++.|.+.-.
T Consensus 32 ~l~~lF~~~aH~~sitavAVs--------~~~~aSGssDetI~IYDm~k~~qlg~l-----l~HagsitaL~F~~~~S~s 98 (362)
T KOG0294|consen 32 TLKPLFAFSAHAGSITALAVS--------GPYVASGSSDETIHIYDMRKRKQLGIL-----LSHAGSITALKFYPPLSKS 98 (362)
T ss_pred eeeccccccccccceeEEEec--------ceeEeccCCCCcEEEEeccchhhhcce-----eccccceEEEEecCCcchh
Confidence 356678889999999999986 479999999999999999876543221 24899999999998764
Q ss_pred EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
.|++|+.||.|.+|+. +.+.++..+++|.+.|+.++.+|.+.+.++.+.|+.++.|++..++...+.. +. ...+
T Consensus 99 hLlS~sdDG~i~iw~~--~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~-L~---~~at 172 (362)
T KOG0294|consen 99 HLLSGSDDGHIIIWRV--GSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLN-LK---NKAT 172 (362)
T ss_pred heeeecCCCcEEEEEc--CCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeec-cC---Ccce
Confidence 8999999999999985 5678899999999999999999999999999999999999998776544332 21 2334
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
.+.|+|.+.+++..+.+ .|-||.+... .....+. ....+.++.|- ++.+|++|++|+.|++||.+..
T Consensus 173 ~v~w~~~Gd~F~v~~~~-~i~i~q~d~A-----~v~~~i~-----~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~- 239 (362)
T KOG0294|consen 173 LVSWSPQGDHFVVSGRN-KIDIYQLDNA-----SVFREIE-----NPKRILCATFL-DGSELLVGGDNEWISLKDTDSD- 239 (362)
T ss_pred eeEEcCCCCEEEEEecc-EEEEEecccH-----hHhhhhh-----ccccceeeeec-CCceEEEecCCceEEEeccCCC-
Confidence 58899999987777654 4788855432 1111221 11345555553 5678889999999999986410
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe-
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW- 326 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~- 326 (352)
.+...+.+|..+|-++.+
T Consensus 240 -------------------------------------------------------------~~~~~~~AH~~RVK~i~~~ 258 (362)
T KOG0294|consen 240 -------------------------------------------------------------TPLTEFLAHENRVKDIASY 258 (362)
T ss_pred -------------------------------------------------------------ccceeeecchhheeeeEEE
Confidence 001123467777777773
Q ss_pred -cCCCcceEEEecCCCeEEEEeecc
Q 018675 327 -SPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 327 -sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.|.+ .+|+|+|.||.|+|||++.
T Consensus 259 ~~~~~-~~lvTaSSDG~I~vWd~~~ 282 (362)
T KOG0294|consen 259 TNPEH-EYLVTASSDGFIKVWDIDM 282 (362)
T ss_pred ecCCc-eEEEEeccCceEEEEEccc
Confidence 3444 4788888899999998753
No 75
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.96 E-value=2.2e-28 Score=204.15 Aligned_cols=291 Identities=19% Similarity=0.366 Sum_probs=211.4
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
....+..|.+.|..+.|-+.. ..|+|++.|..|++|+....+. .....+ ..-.++|+++.|.++++.++++
T Consensus 167 ~~~~ld~h~gev~~v~~l~~s------dtlatgg~Dr~Ik~W~v~~~k~--~~~~tL-aGs~g~it~~d~d~~~~~~iAa 237 (459)
T KOG0288|consen 167 ALFVLDAHEGEVHDVEFLRNS------DTLATGGSDRIIKLWNVLGEKS--ELISTL-AGSLGNITSIDFDSDNKHVIAA 237 (459)
T ss_pred hhhhhhccccccceeEEccCc------chhhhcchhhhhhhhhcccchh--hhhhhh-hccCCCcceeeecCCCceEEee
Confidence 334567899999999998863 5799999999999999765431 111222 1234679999999999999999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
+.|+.+++|++... ....++.+|++.|+++.|......+++|+.|.+++.||+... .|...+.. ...+..+...
T Consensus 238 s~d~~~r~Wnvd~~--r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~---~C~kt~l~-~S~cnDI~~~ 311 (459)
T KOG0288|consen 238 SNDKNLRLWNVDSL--RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKA---YCSKTVLP-GSQCNDIVCS 311 (459)
T ss_pred cCCCceeeeeccch--hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhh---heeccccc-cccccceEec
Confidence 99999999998655 456788999999999999887777999999999999999653 23332221 1233444443
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCC
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (352)
...+++|..|+.|++||....+ +..... . ++.|.+|+.++++..+.+++.|.++++.|++....
T Consensus 312 --~~~~~SgH~DkkvRfwD~Rs~~-----~~~sv~----~-gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI---- 375 (459)
T KOG0288|consen 312 --ISDVISGHFDKKVRFWDIRSAD-----KTRSVP----L-GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEI---- 375 (459)
T ss_pred --ceeeeecccccceEEEeccCCc-----eeeEee----c-CcceeeEeeccCCeEEeeecCCCceeeeecccccE----
Confidence 4467899999999999876543 222221 2 34899999999999999999999999999874322
Q ss_pred CCccceeeEEeecc-cCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCC
Q 018675 253 GYASWRHLCTISGY-HDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 253 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~ 330 (352)
++.....++ .......+.|+|++ |+++|+.||.+++|......+ .. .. ....-...|++++|+|.|
T Consensus 376 -----~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKl-----E~-~l-~~s~s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 376 -----RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKL-----EK-VL-SLSTSNAAITSLSWNPSG 443 (459)
T ss_pred -----EEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceE-----EE-Ee-ccCCCCcceEEEEEcCCC
Confidence 111111111 11225567788876 899999999999997654322 11 11 122222379999999999
Q ss_pred cceEEEecCCCeEEEEe
Q 018675 331 RRLLASASDDGMIKIWE 347 (352)
Q Consensus 331 ~~~l~s~~~Dg~i~iw~ 347 (352)
.. |++++.++.+.+|.
T Consensus 444 ~~-Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 444 SG-LLSADKQKAVTLWT 459 (459)
T ss_pred ch-hhcccCCcceEecC
Confidence 75 56899999999994
No 76
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.96 E-value=1e-26 Score=212.02 Aligned_cols=276 Identities=29% Similarity=0.528 Sum_probs=214.2
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
|...+.|..|++ .++++++.|+++++|+...+..... .+ ..|.+.|.++++..-+..|++|+.|.+++
T Consensus 207 ~~~~~~~~q~~~--------~~~~~~s~~~tl~~~~~~~~~~i~~---~l-~GH~g~V~~l~~~~~~~~lvsgS~D~t~r 274 (537)
T KOG0274|consen 207 DDHVVLCLQLHD--------GFFKSGSDDSTLHLWDLNNGYLILT---RL-VGHFGGVWGLAFPSGGDKLVSGSTDKTER 274 (537)
T ss_pred Ccchhhhheeec--------CeEEecCCCceeEEeecccceEEEe---ec-cCCCCCceeEEEecCCCEEEEEecCCcEE
Confidence 566788888884 3799999999999999877643221 11 46999999999998889999999999999
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
+||..++ .+...+.+|.+.|.++...+ ..+++|+.|.+|++|++..+ .++..+.+|..+|.++... +.+++
T Consensus 275 vWd~~sg--~C~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~---~~l~l~~~h~~~V~~v~~~--~~~lv 345 (537)
T KOG0274|consen 275 VWDCSTG--ECTHSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNG---ACLNLLRGHTGPVNCVQLD--EPLLV 345 (537)
T ss_pred eEecCCC--cEEEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCc---ceEEEeccccccEEEEEec--CCEEE
Confidence 9998776 67888999999999997654 57888999999999999754 4677788899999999987 77999
Q ss_pred EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc-ccccCCCCccce
Q 018675 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT-RMQSGDGYASWR 258 (352)
Q Consensus 180 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~ 258 (352)
+|+.|+.|++|+.. ..++++++. +|..+|.++.+.+. ..+++|+.|+.|++||++.. +..
T Consensus 346 sgs~d~~v~VW~~~-----~~~cl~sl~----gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~--------- 406 (537)
T KOG0274|consen 346 SGSYDGTVKVWDPR-----TGKCLKSLS----GHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCI--------- 406 (537)
T ss_pred EEecCceEEEEEhh-----hceeeeeec----CCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhh---------
Confidence 99999999999765 345666554 79999999988765 78999999999999998754 211
Q ss_pred eeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccc-cCcceeEEEecCCCcceEEEe
Q 018675 259 HLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA-HDMDVNSVQWSPGERRLLASA 337 (352)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~sp~~~~~l~s~ 337 (352)
..+. .|...+..+. ..+..+++++.|++|++|+...... ++...+ |.+.|..+++. + ..++++
T Consensus 407 --~tl~-~h~~~v~~l~-~~~~~Lvs~~aD~~Ik~WD~~~~~~---------~~~~~~~~~~~v~~l~~~-~--~~il~s 470 (537)
T KOG0274|consen 407 --HTLQ-GHTSLVSSLL-LRDNFLVSSSADGTIKLWDAEEGEC---------LRTLEGRHVGGVSALALG-K--EEILCS 470 (537)
T ss_pred --hhhc-CCcccccccc-cccceeEeccccccEEEeecccCce---------eeeeccCCcccEEEeecC-c--ceEEEE
Confidence 1111 1222222221 2356899999999999997655332 223334 66889999886 2 246789
Q ss_pred cCCCeEEEEeeccC
Q 018675 338 SDDGMIKIWELANT 351 (352)
Q Consensus 338 ~~Dg~i~iw~~~~~ 351 (352)
+.||++++||++.+
T Consensus 471 ~~~~~~~l~dl~~~ 484 (537)
T KOG0274|consen 471 SDDGSVKLWDLRSG 484 (537)
T ss_pred ecCCeeEEEecccC
Confidence 99999999998753
No 77
>PTZ00421 coronin; Provisional
Probab=99.96 E-value=2.3e-26 Score=209.28 Aligned_cols=212 Identities=23% Similarity=0.360 Sum_probs=162.3
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceee---eeeeeeecceecceEEEEECCCC-CEEEE
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW---NCKAVLEEMHTRTVRSCAWSPSG-KLLAT 91 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~---~~~~~~~~~h~~~v~~~~~s~~~-~~l~s 91 (352)
.+.||.+.|++++|+|.+ +.+|+|||.|++|++|++.+..... .+... ...|...|.+++|+|++ .+|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d-----~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~-L~gH~~~V~~l~f~P~~~~iLaS 143 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFD-----PQKLFTASEDGTIMGWGIPEEGLTQNISDPIVH-LQGHTKKVGIVSFHPSAMNVLAS 143 (493)
T ss_pred eEeCCCCCEEEEEEcCCC-----CCEEEEEeCCCEEEEEecCCCccccccCcceEE-ecCCCCcEEEEEeCcCCCCEEEE
Confidence 478999999999999943 3689999999999999986542110 11111 24588999999999986 69999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC-eeEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD-VKMVQ 170 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~-v~~~~ 170 (352)
|+.|++|+|||..++. ....+.+|...|.+++|+|++.+|++++.|++|++||++.+. .+..+.+|... ...+.
T Consensus 144 gs~DgtVrIWDl~tg~--~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~---~v~tl~~H~~~~~~~~~ 218 (493)
T PTZ00421 144 AGADMVVNVWDVERGK--AVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGT---IVSSVEAHASAKSQRCL 218 (493)
T ss_pred EeCCCEEEEEECCCCe--EEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCc---EEEEEecCCCCcceEEE
Confidence 9999999999987663 456778899999999999999999999999999999997654 34556677654 34677
Q ss_pred EcCCCCEEEEEe----CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCcEEEEcCCc
Q 018675 171 WHPTMDVLFSCS----YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGADI 245 (352)
Q Consensus 171 ~~~~~~~l~s~~----~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~i~iwd~~~ 245 (352)
|.+++..+++++ .|+.|++||+..... ...... ..+...+....|++++.+|++++ .|+.|++||+..
T Consensus 219 w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~----p~~~~~---~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~ 291 (493)
T PTZ00421 219 WAKRKDLIITLGCSKSQQRQIMLWDTRKMAS----PYSTVD---LDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN 291 (493)
T ss_pred EcCCCCeEEEEecCCCCCCeEEEEeCCCCCC----ceeEec---cCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC
Confidence 888877777654 478999998764321 111111 11234566678999999999887 499999999863
No 78
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=7.7e-28 Score=188.11 Aligned_cols=256 Identities=27% Similarity=0.428 Sum_probs=196.7
Q ss_pred eecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCce-eeeEeeccccCCeeEEEEC-C-CCcEEEEeeCCCcEEEE
Q 018675 69 LEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDY-ECVATLEGHENEVKSVSWN-A-SGTLLATCGRDKSVWIW 145 (352)
Q Consensus 69 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~-~-~~~~l~s~~~d~~v~vw 145 (352)
+...|+..|..+...--|++|||++.|++|+|+...++.. .++.++.+|.++|+.++|- | -|++|++|+.||.|.+|
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiW 85 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIW 85 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEE
Confidence 4456888888888888899999999999999999876543 6788999999999999994 4 79999999999999999
Q ss_pred ecCCCCeeEEEEEeecCccCeeEEEEcCCC--CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 146 EVMPGNEFECVSVLQGHAQDVKMVQWHPTM--DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 146 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
.-..+ ..........|...|++++|-|.+ -+|++++.||.|.+.+.... +.+. .......|.-.|++++|.
T Consensus 86 ke~~g-~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~--g~w~----t~ki~~aH~~GvnsVswa 158 (299)
T KOG1332|consen 86 KEENG-RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS--GGWT----TSKIVFAHEIGVNSVSWA 158 (299)
T ss_pred ecCCC-chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC--CCcc----chhhhhccccccceeeec
Confidence 97554 444456677899999999999864 57899999999999976553 1121 112345799999999999
Q ss_pred CC---C-----------CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-----ceEEe
Q 018675 224 AK---G-----------DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-----GIIAS 284 (352)
Q Consensus 224 ~~---~-----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~s 284 (352)
|. | +.|++||.|+.|+||+.+.. .|...+++. .|...+..++|.|. .++++
T Consensus 159 pa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~---------~w~~e~~l~-~H~dwVRDVAwaP~~gl~~s~iAS 228 (299)
T KOG1332|consen 159 PASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD---------SWKLERTLE-GHKDWVRDVAWAPSVGLPKSTIAS 228 (299)
T ss_pred CcCCCccccccCcccccceeeccCCccceeeeecCCc---------chhhhhhhh-hcchhhhhhhhccccCCCceeeEE
Confidence 86 4 46999999999999986531 333333332 36677888888874 37999
Q ss_pred cCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 285 GAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 285 ~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
++.||++.+|...... ...+ ...+......+.+++||+.|. +|+-++.|+.+.+|.-
T Consensus 229 ~SqDg~viIwt~~~e~----e~wk--~tll~~f~~~~w~vSWS~sGn-~LaVs~GdNkvtlwke 285 (299)
T KOG1332|consen 229 CSQDGTVIIWTKDEEY----EPWK--KTLLEEFPDVVWRVSWSLSGN-ILAVSGGDNKVTLWKE 285 (299)
T ss_pred ecCCCcEEEEEecCcc----Cccc--ccccccCCcceEEEEEecccc-EEEEecCCcEEEEEEe
Confidence 9999999999654211 1111 111233567899999999885 6777777999999974
No 79
>PTZ00421 coronin; Provisional
Probab=99.96 E-value=4.2e-26 Score=207.55 Aligned_cols=207 Identities=21% Similarity=0.328 Sum_probs=153.1
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeee--------eeeecceecceEEEEECC-CCCEEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK--------AVLEEMHTRTVRSCAWSP-SGKLLA 90 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~--------~~~~~~h~~~v~~~~~s~-~~~~l~ 90 (352)
|-..|......++ +..+++++.+.....|+...+..+.... ......|.+.|++++|+| ++++|+
T Consensus 19 ~~~~i~~~~~~~d------~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~La 92 (493)
T PTZ00421 19 HFLNVTPSTALWD------CSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLF 92 (493)
T ss_pred ceeccccccccCC------CCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEE
Confidence 3444554444444 2356777777777778754432221100 011245899999999999 889999
Q ss_pred EEeCCCcEEEEEccCCce-----eeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 91 TASFDATTCIWEDVGGDY-----ECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~-----~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
+|+.|++|++|+...+.. .++..+.+|...|.+++|+|++ ++|++++.|++|++||+..+. .+..+.+|..
T Consensus 93 SgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~---~~~~l~~h~~ 169 (493)
T PTZ00421 93 TASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK---AVEVIKCHSD 169 (493)
T ss_pred EEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe---EEEEEcCCCC
Confidence 999999999999765321 3456788999999999999975 689999999999999997653 4556778999
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCccc-EEEEEEcCCCCEEEEEe----CCCcEE
Q 018675 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST-IWALSFNAKGDKLVSCS----DDLTIK 239 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~l~~~~~~~~l~s~~----~dg~i~ 239 (352)
.|.+++|+|++.+|++++.|+.|++||++... ....+ .+|... +..+.|.+++..+++++ .|+.|+
T Consensus 170 ~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~-----~v~tl----~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~Vk 240 (493)
T PTZ00421 170 QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGT-----IVSSV----EAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIM 240 (493)
T ss_pred ceEEEEEECCCCEEEEecCCCEEEEEECCCCc-----EEEEE----ecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEE
Confidence 99999999999999999999999999876532 22222 245543 34677888888887765 478999
Q ss_pred EEcCC
Q 018675 240 IWGAD 244 (352)
Q Consensus 240 iwd~~ 244 (352)
+||++
T Consensus 241 lWDlr 245 (493)
T PTZ00421 241 LWDTR 245 (493)
T ss_pred EEeCC
Confidence 99874
No 80
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=6.5e-28 Score=198.32 Aligned_cols=286 Identities=23% Similarity=0.364 Sum_probs=209.8
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
.-+..|.||.+.|+|++-+|.. ...+||||.||.|++||+......+.. ..|.+.|+.+.++. ..+++
T Consensus 57 PFv~~L~gHrdGV~~lakhp~~-----ls~~aSGs~DG~VkiWnlsqR~~~~~f-----~AH~G~V~Gi~v~~--~~~~t 124 (433)
T KOG0268|consen 57 PFVGSLDGHRDGVSCLAKHPNK-----LSTVASGSCDGEVKIWNLSQRECIRTF-----KAHEGLVRGICVTQ--TSFFT 124 (433)
T ss_pred cchhhccccccccchhhcCcch-----hhhhhccccCceEEEEehhhhhhhhee-----ecccCceeeEEecc--cceEE
Confidence 3456789999999999999975 357999999999999999876543322 45999999999987 67889
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
++.|.+++.|..... +..++-+ ...+..++-+..++.++|||.+ |.+||.....+ +..+.-....+.++.|
T Consensus 125 vgdDKtvK~wk~~~~---p~~tilg-~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~R~~P---v~smswG~Dti~svkf 195 (433)
T KOG0268|consen 125 VGDDKTVKQWKIDGP---PLHTILG-KSVYLGIDHHRKNSVFATCGEQ--IDIWDEQRDNP---VSSMSWGADSISSVKF 195 (433)
T ss_pred ecCCcceeeeeccCC---cceeeec-cccccccccccccccccccCce--eeecccccCCc---cceeecCCCceeEEec
Confidence 999999999976542 3444433 4566777766777889999864 88999865443 4445556678999999
Q ss_pred cCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 172 HPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 172 ~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
+|... .|++++.|+.|.+||.+.... ++.+. .+-.-+.++|+|.+..++++.+|..+..||++... .
T Consensus 196 NpvETsILas~~sDrsIvLyD~R~~~P-----l~KVi-----~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~--~ 263 (433)
T KOG0268|consen 196 NPVETSILASCASDRSIVLYDLRQASP-----LKKVI-----LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS--R 263 (433)
T ss_pred CCCcchheeeeccCCceEEEecccCCc-----cceee-----eeccccceecCccccceeeccccccceehhhhhhc--c
Confidence 99765 577888999999998875432 11111 12345679999988889999999999999875321 1
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCC
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~ 329 (352)
+... .-.|.+.+..++++|-| -+++|+.|.+|++|-....-- +.+..+ .--..|.++.||-|
T Consensus 264 --------p~~v-~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S------RdiYht--kRMq~V~~Vk~S~D 326 (433)
T KOG0268|consen 264 --------PLNV-HKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS------RDIYHT--KRMQHVFCVKYSMD 326 (433)
T ss_pred --------cchh-hcccceeEEEeccCCCcchhccccccceEEEeecCCCcc------hhhhhH--hhhheeeEEEEecc
Confidence 1111 12367788999999977 699999999999995543111 111000 11246999999998
Q ss_pred CcceEEEecCCCeEEEEee
Q 018675 330 ERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 330 ~~~~l~s~~~Dg~i~iw~~ 348 (352)
.+ +++|||+|+.||+|.-
T Consensus 327 sk-yi~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 327 SK-YIISGSDDGNVRLWKA 344 (433)
T ss_pred cc-EEEecCCCcceeeeec
Confidence 86 6789999999999975
No 81
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=8.9e-26 Score=193.84 Aligned_cols=243 Identities=37% Similarity=0.615 Sum_probs=193.6
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
.|..+|++++|+|++++|++++.|+.+.+|+..++. ....+..|...+..+.|+|+++.+++++.|+.+.+|++....
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~ 84 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE--LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE 84 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC--cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc
Confidence 588999999999999999999999999999987653 345667888899999999999999999999999999987543
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
....+..|...+.++.|+|++.++++++.++.+.+|++... .....+ ..|...|.++.|+|++.++++
T Consensus 85 ---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~----~~~~~~i~~~~~~~~~~~l~~ 152 (289)
T cd00200 85 ---CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG-----KCLTTL----RGHTDWVNSVAFSPDGTFVAS 152 (289)
T ss_pred ---ceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc-----EEEEEe----ccCCCcEEEEEEcCcCCEEEE
Confidence 34456678888999999999888888888999999987532 122222 257788999999999999998
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccccee
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKML 310 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~ 310 (352)
++.|+.|++||++..+. ...+. .+...+.++.+.+++ .+++++.++.+++|+.... ..
T Consensus 153 ~~~~~~i~i~d~~~~~~-----------~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~---------~~ 211 (289)
T cd00200 153 SSQDGTIKLWDLRTGKC-----------VATLT-GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTG---------KC 211 (289)
T ss_pred EcCCCcEEEEEcccccc-----------ceeEe-cCccccceEEECCCcCEEEEecCCCcEEEEECCCC---------ce
Confidence 88899999999753211 11121 345578899999987 7888888999999976532 12
Q ss_pred eecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 311 ~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
......|...|.+++|+|++ .++++++.||.|++|++..
T Consensus 212 ~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~i~~~~~ 250 (289)
T cd00200 212 LGTLRGHENGVNSVAFSPDG-YLLASGSEDGTIRVWDLRT 250 (289)
T ss_pred ecchhhcCCceEEEEEcCCC-cEEEEEcCCCcEEEEEcCC
Confidence 23344788899999999985 4777888899999999864
No 82
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.96 E-value=4.8e-28 Score=189.94 Aligned_cols=248 Identities=20% Similarity=0.380 Sum_probs=195.6
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
.=+.+|+||++.|++.+...+ ....||++.|=+.++||.-++..+. ...|...|.+|+|+.|..+|++
T Consensus 50 dwigtfeghkgavw~~~l~~n------a~~aasaaadftakvw~a~tgdelh------sf~hkhivk~~af~~ds~~llt 117 (334)
T KOG0278|consen 50 DWIGTFEGHKGAVWSATLNKN------ATRAASAAADFTAKVWDAVTGDELH------SFEHKHIVKAVAFSQDSNYLLT 117 (334)
T ss_pred CcEEeeeccCcceeeeecCch------hhhhhhhcccchhhhhhhhhhhhhh------hhhhhheeeeEEecccchhhhc
Confidence 446789999999999988765 3578999999999999977664321 2347889999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
|+.+..+++||....+ .+...+.+|.+.|+.+.|....+.|+++++|++|++||.+.+...+. +. -..+|+++..
T Consensus 118 gg~ekllrvfdln~p~-App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~s---L~-~~s~VtSlEv 192 (334)
T KOG0278|consen 118 GGQEKLLRVFDLNRPK-APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQS---LE-FNSPVTSLEV 192 (334)
T ss_pred cchHHHhhhhhccCCC-CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEE---Ee-cCCCCcceee
Confidence 9999999999876544 34567789999999999998888899999999999999988764433 33 2347899999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
++++.++ +....+.|++|+.. ++..++... ....|.+.+++|+...+++|+.|..+..||.+...
T Consensus 193 s~dG~il-Tia~gssV~Fwdak-----sf~~lKs~k-----~P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tge---- 257 (334)
T KOG0278|consen 193 SQDGRIL-TIAYGSSVKFWDAK-----SFGLLKSYK-----MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGE---- 257 (334)
T ss_pred ccCCCEE-EEecCceeEEeccc-----cccceeecc-----CccccccccccCCCceEEecCcceEEEEEeccCCc----
Confidence 9999865 55567889999543 333333321 23568888999999999999999999999876432
Q ss_pred CCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
.+..+...|-.++.++.|+|+| ..++|+.||++++|....
T Consensus 258 -------Ei~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 258 -------EIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTP 298 (334)
T ss_pred -------eeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecC
Confidence 2222323467789999999988 789999999999997653
No 83
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=6.2e-28 Score=205.21 Aligned_cols=248 Identities=20% Similarity=0.350 Sum_probs=194.2
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecce-ecceEEEEECCCC-CEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH-TRTVRSCAWSPSG-KLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~-~~l 89 (352)
.++.+|.||...|.+++|++. +..|+|+|.|+.+++||.+++....+ +| ...++|+.|.|++ +.+
T Consensus 249 ~~lrtf~gH~k~Vrd~~~s~~------g~~fLS~sfD~~lKlwDtETG~~~~~-------f~~~~~~~cvkf~pd~~n~f 315 (503)
T KOG0282|consen 249 RCLRTFKGHRKPVRDASFNNC------GTSFLSASFDRFLKLWDTETGQVLSR-------FHLDKVPTCVKFHPDNQNIF 315 (503)
T ss_pred ceehhhhcchhhhhhhhcccc------CCeeeeeecceeeeeeccccceEEEE-------EecCCCceeeecCCCCCcEE
Confidence 567889999999999999986 57899999999999999999854221 23 3567999999998 789
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
++|+.|+.|+.||..+++ .+.....|-+.|..+.|-++|.+++++++|+++++|+....-..+.+.. .+...+.++
T Consensus 316 l~G~sd~ki~~wDiRs~k--vvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~--~~~hsmP~~ 391 (503)
T KOG0282|consen 316 LVGGSDKKIRQWDIRSGK--VVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIAD--PEMHTMPCL 391 (503)
T ss_pred EEecCCCcEEEEeccchH--HHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcc--hhhccCcce
Confidence 999999999999998875 4566778889999999999999999999999999999765433322222 233346788
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCc--ccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS--STIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~--~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
..+|.+..++.=+.|+.|.++........+. .....||. +.-..+.|||||.+|++|..||.+.+||.+..+
T Consensus 392 ~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nk------kK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k 465 (503)
T KOG0282|consen 392 TLHPNGKWFAAQSMDNYIAIFSTVPPFRLNK------KKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK 465 (503)
T ss_pred ecCCCCCeehhhccCceEEEEecccccccCH------hhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhh
Confidence 9999999999999999999996443322111 11223453 234468999999999999999999999987544
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCC--ceEEecCCCCeEEEE
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQFF 294 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~s~~~d~~v~~~ 294 (352)
+.. .+. .|++.+..+.|.|. ..+|+++.||.|++|
T Consensus 466 l~~-----------~lk-ah~~~ci~v~wHP~e~Skvat~~w~G~Ikiw 502 (503)
T KOG0282|consen 466 LVS-----------KLK-AHDQPCIGVDWHPVEPSKVATCGWDGLIKIW 502 (503)
T ss_pred hhh-----------ccc-cCCcceEEEEecCCCcceeEecccCceeEec
Confidence 321 122 35778888999985 479999999999998
No 84
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.96 E-value=1e-26 Score=184.08 Aligned_cols=219 Identities=19% Similarity=0.306 Sum_probs=172.8
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
+.+.+++||++.|||++..-+ .+.++|||.|.+++|||.++++.+.+.+ -..+|..+.|+++|.+++.
T Consensus 43 erlGty~GHtGavW~~Did~~------s~~liTGSAD~t~kLWDv~tGk~la~~k------~~~~Vk~~~F~~~gn~~l~ 110 (327)
T KOG0643|consen 43 ERLGTYDGHTGAVWCCDIDWD------SKHLITGSADQTAKLWDVETGKQLATWK------TNSPVKRVDFSFGGNLILA 110 (327)
T ss_pred ceeeeecCCCceEEEEEecCC------cceeeeccccceeEEEEcCCCcEEEEee------cCCeeEEEeeccCCcEEEE
Confidence 467899999999999988665 4789999999999999999987654433 3568999999999998877
Q ss_pred EeCC-----CcEEEEEccCC-----ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec
Q 018675 92 ASFD-----ATTCIWEDVGG-----DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161 (352)
Q Consensus 92 ~~~d-----~~i~i~~~~~~-----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 161 (352)
...+ +.|.++|.... ...+...+..+.+.++...|.|.++.|++|.+||.|..||++.+.. .+..-.-
T Consensus 111 ~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~--~v~s~~~ 188 (327)
T KOG0643|consen 111 STDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKE--LVDSDEE 188 (327)
T ss_pred EehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCce--eeechhh
Confidence 6543 57888886532 1234667778889999999999999999999999999999987653 3444556
Q ss_pred CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC-cee--------------------------Eee-------e-
Q 018675 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN-WHC--------------------------VQT-------I- 206 (352)
Q Consensus 162 h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~--------------------------~~~-------~- 206 (352)
|...|+.++++|+..++++++.|.+-++||+..-.... +.+ +.+ +
T Consensus 189 h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFE 268 (327)
T KOG0643|consen 189 HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFE 268 (327)
T ss_pred hccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchh
Confidence 88899999999999999999999999999875421100 000 000 0
Q ss_pred -----------eccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 207 -----------SESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 207 -----------~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
....++|-++|++|+|+|+|+..+||+.||.||+.-++
T Consensus 269 ArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 269 ARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred hhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 01125799999999999999999999999999998554
No 85
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.96 E-value=2.4e-26 Score=203.27 Aligned_cols=325 Identities=23% Similarity=0.424 Sum_probs=231.0
Q ss_pred CccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc--------------------eee-ee
Q 018675 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS--------------------RFW-NC 65 (352)
Q Consensus 7 ~~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~--------------------~~~-~~ 65 (352)
..-.+....+++||.+.|.+++|....+ ..-+|||+|+|..||||.+.... ... ..
T Consensus 177 ~~d~f~~v~el~GH~DWIrsl~f~~~~~---~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i 253 (764)
T KOG1063|consen 177 SADSFARVAELEGHTDWIRSLAFARLGG---DDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEI 253 (764)
T ss_pred CCcceeEEEEeeccchhhhhhhhhccCC---CcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeE
Confidence 3345678889999999999999976532 24689999999999999753221 000 00
Q ss_pred ee-----eeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCC--ceee---eEeeccccCCeeEEEECCCCcEEEE
Q 018675 66 KA-----VLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG--DYEC---VATLEGHENEVKSVSWNASGTLLAT 135 (352)
Q Consensus 66 ~~-----~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~--~~~~---~~~~~~h~~~v~~v~~~~~~~~l~s 135 (352)
.. .+...|+.-|+++.|+|.+..|++++.|.++.+|..... -+.. +..+.+.........|+|+++.+++
T Consensus 254 ~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~ 333 (764)
T KOG1063|consen 254 QYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIA 333 (764)
T ss_pred EEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEE
Confidence 00 112359999999999999999999999999999975432 2222 2333444556889999999999999
Q ss_pred eeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 136 ~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
-+.-|..++|.-...........+.||...|+.++|+|.|.+|++.|.|-+-+++.--. ....|.-+.. ...|+.
T Consensus 334 ~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg-~q~~wHEiaR----PQiHGy 408 (764)
T KOG1063|consen 334 HGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWG-RQQEWHEIAR----PQIHGY 408 (764)
T ss_pred ecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccc-cccceeeecc----cccccc
Confidence 99999999998444444444556789999999999999999999999999999985432 2233544333 346999
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc--------------------------------c-cc---cCCC------
Q 018675 216 TIWALSFNAKGDKLVSCSDDLTIKIWGADIT--------------------------------R-MQ---SGDG------ 253 (352)
Q Consensus 216 ~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~--------------------------------~-~~---~~~~------ 253 (352)
.++|++|-+....+++|.++..+|+|+.... + +. ...+
T Consensus 409 Dl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~ 488 (764)
T KOG1063|consen 409 DLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVC 488 (764)
T ss_pred cceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCccccccccccccee
Confidence 9999999886677899999999999975200 0 00 0000
Q ss_pred -----------------------CccceeeEEeecccCcceEEEEecCCc-eEEecCCCC-----eEEEEEccCCccccC
Q 018675 254 -----------------------YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADD-----SVQFFVESKDDLIDG 304 (352)
Q Consensus 254 -----------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~-----~v~~~~~~~~~~~~~ 304 (352)
...|.+..++. .|...+++++.++++ .+|+++... .|++|....
T Consensus 489 ~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLY-GHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~------ 561 (764)
T KOG1063|consen 489 AETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLY-GHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN------ 561 (764)
T ss_pred eecccccCchhccCCChHHHHHHhccchhhHHhc-cCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc------
Confidence 00111111222 256789999999876 566655432 356664322
Q ss_pred cccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 305 PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 305 ~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
. ...+.+.+|+..|+.++||||++ +|+++|.|.++.+|+..+
T Consensus 562 --W-~~~~~L~~HsLTVT~l~FSpdg~-~LLsvsRDRt~sl~~~~~ 603 (764)
T KOG1063|consen 562 --W-LQVQELEGHSLTVTRLAFSPDGR-YLLSVSRDRTVSLYEVQE 603 (764)
T ss_pred --h-hhhheecccceEEEEEEECCCCc-EEEEeecCceEEeeeeec
Confidence 1 12335679999999999999997 577999999999999754
No 86
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=3e-24 Score=174.20 Aligned_cols=292 Identities=15% Similarity=0.236 Sum_probs=208.2
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
++.+.++.-...|+++.|+++ +.++++++.|.+++||+..+++...... .++..+..+.|......++.
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~~------G~~litss~dDsl~LYd~~~g~~~~ti~-----skkyG~~~~~Fth~~~~~i~ 73 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSDD------GLLLITSSEDDSLRLYDSLSGKQVKTIN-----SKKYGVDLACFTHHSNTVIH 73 (311)
T ss_pred ccccccccCCCceeEEEecCC------CCEEEEecCCCeEEEEEcCCCceeeEee-----cccccccEEEEecCCceEEE
Confidence 445556666789999999997 6899999999999999998775432221 12345677778766666665
Q ss_pred EeC--CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 92 ASF--DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 92 ~~~--d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
++. |.+|+..+..+.+ .+..+.||...|++++.+|-++.+++++.|++|++||++..+-... +. ...-..+
T Consensus 74 sStk~d~tIryLsl~dNk--ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~---l~--~~~~pi~ 146 (311)
T KOG1446|consen 74 SSTKEDDTIRYLSLHDNK--YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGL---LN--LSGRPIA 146 (311)
T ss_pred ccCCCCCceEEEEeecCc--eEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceE---Ee--cCCCcce
Confidence 655 8899988876654 4667899999999999999999999999999999999975432222 21 1223356
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc
Q 018675 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (352)
+|.|+|-++|++.....|++||++.-+.+.+.... + ..+-....+.|.|+|+|++|+.++..+.+.+.|.-...
T Consensus 147 AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~-i---~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~-- 220 (311)
T KOG1446|consen 147 AFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFS-I---TDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGT-- 220 (311)
T ss_pred eECCCCcEEEEecCCCeEEEEEecccCCCCceeEc-c---CCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCc--
Confidence 89999999999988889999998876666554332 1 11335678899999999999999999999999853211
Q ss_pred cCCCCccceeeEEeecc--cCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccc-cCcceeEEE
Q 018675 250 SGDGYASWRHLCTISGY--HDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA-HDMDVNSVQ 325 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~ 325 (352)
...++..+ ..+...+.+++|++ ++++|+.||.+.+|..... ..+....+ +.+++.++.
T Consensus 221 ---------~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg---------~~v~~~~~~~~~~~~~~~ 282 (311)
T KOG1446|consen 221 ---------VKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETG---------KKVAVLRGPNGGPVSCVR 282 (311)
T ss_pred ---------EeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCC---------cEeeEecCCCCCCccccc
Confidence 11122211 12223566777876 7888899999999965321 11222333 788899999
Q ss_pred ecCCCcceEEEecCCCeEEEEee
Q 018675 326 WSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 326 ~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
|+|.- .+++|+ +..+-+|=.
T Consensus 283 fnP~~-~mf~sa--~s~l~fw~p 302 (311)
T KOG1446|consen 283 FNPRY-AMFVSA--SSNLVFWLP 302 (311)
T ss_pred cCCce-eeeeec--CceEEEEec
Confidence 99964 355554 667877744
No 87
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=2.2e-26 Score=213.18 Aligned_cols=256 Identities=25% Similarity=0.483 Sum_probs=198.3
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCC---C-----------ceeeeeeeeeecceecce
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA---S-----------SRFWNCKAVLEEMHTRTV 77 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~---~-----------~~~~~~~~~~~~~h~~~v 77 (352)
+++.+..-|...|+|+.|+|+ +++||+||+|+.|.+|+... + ...|+....+ ..|...|
T Consensus 60 k~l~~m~~h~~sv~CVR~S~d------G~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l-~~H~~DV 132 (942)
T KOG0973|consen 60 KHLCTMDDHDGSVNCVRFSPD------GSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSIL-RGHDSDV 132 (942)
T ss_pred hhheeeccccCceeEEEECCC------CCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEE-ecCCCcc
Confidence 455677789999999999998 68999999999999998762 1 1235555544 3499999
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE
Q 018675 78 RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 157 (352)
..+.|+|++.+|++++.|++|.+|+..+. ..+.++.+|.+.|..+.|.|-|++|++-++|++|++|+... +.+.+
T Consensus 133 ~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF--~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d---w~i~k 207 (942)
T KOG0973|consen 133 LDVNWSPDDSLLVSVSLDNSVIIWNAKTF--ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD---WGIEK 207 (942)
T ss_pred ceeccCCCccEEEEecccceEEEEccccc--eeeeeeecccccccceEECCccCeeeeecCCceEEEEEccc---ceeeE
Confidence 99999999999999999999999998765 67888999999999999999999999999999999999643 22333
Q ss_pred EeecCc------cCeeEEEEcCCCCEEEEEeC----CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC--
Q 018675 158 VLQGHA------QDVKMVQWHPTMDVLFSCSY----DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-- 225 (352)
Q Consensus 158 ~~~~h~------~~v~~~~~~~~~~~l~s~~~----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-- 225 (352)
.+.++. .-+..+.|+|||.+|++... -..+.|. +.+.|+.-..+ .||..++.++.|+|.
T Consensus 208 ~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Ii-----eR~tWk~~~~L----vGH~~p~evvrFnP~lf 278 (942)
T KOG0973|consen 208 SITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAII-----ERGTWKVDKDL----VGHSAPVEVVRFNPKLF 278 (942)
T ss_pred eeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEE-----ecCCceeeeee----ecCCCceEEEEeChHHh
Confidence 333222 23567899999999987643 2356665 34556554444 489999999999982
Q ss_pred ---CC------------EEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCC
Q 018675 226 ---GD------------KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADD 289 (352)
Q Consensus 226 ---~~------------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~ 289 (352)
.. .+|+|+.|+.|.||..... +++..+......+|..++|+++| .|.+++.||
T Consensus 279 e~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~-----------RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DG 347 (942)
T KOG0973|consen 279 ERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP-----------RPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDG 347 (942)
T ss_pred ccccccCCccCCCcceEEEEEecCCccEEEEecCCC-----------CchhhhhhhhcCceeeeeEcCCCCeEEEEecCC
Confidence 11 4778999999999976432 23333333456789999999998 488999999
Q ss_pred eEEEEEccCC
Q 018675 290 SVQFFVESKD 299 (352)
Q Consensus 290 ~v~~~~~~~~ 299 (352)
+|.++...+.
T Consensus 348 tV~~i~Fee~ 357 (942)
T KOG0973|consen 348 TVALIHFEEK 357 (942)
T ss_pred eEEEEEcchH
Confidence 9999876653
No 88
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=5.6e-26 Score=193.60 Aligned_cols=277 Identities=20% Similarity=0.321 Sum_probs=206.8
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
.+.|++++|+|... .-+|+++ .-.+.||+..+.....+ + ....+-|+++.|-.||++||.|...|.+++
T Consensus 26 ~~~vssl~fsp~~P-----~d~aVt~-S~rvqly~~~~~~~~k~----~-srFk~~v~s~~fR~DG~LlaaGD~sG~V~v 94 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHP-----YDFAVTS-SVRVQLYSSVTRSVRKT----F-SRFKDVVYSVDFRSDGRLLAAGDESGHVKV 94 (487)
T ss_pred cCcceeEecCCCCC-----CceEEec-ccEEEEEecchhhhhhh----H-HhhccceeEEEeecCCeEEEccCCcCcEEE
Confidence 36899999999652 2344443 35788898665432111 1 123567999999999999999999999999
Q ss_pred EEccCCceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC-CEE
Q 018675 101 WEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVL 178 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l 178 (352)
||..+ . ..+..+.+|+.+|..+.|+|.+ ..|++|++|+.+++||+.... ....+.+|...|.|.+|+|.. .++
T Consensus 95 fD~k~-r-~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~---v~~~l~~htDYVR~g~~~~~~~hiv 169 (487)
T KOG0310|consen 95 FDMKS-R-VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY---VQAELSGHTDYVRCGDISPANDHIV 169 (487)
T ss_pred ecccc-H-HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE---EEEEecCCcceeEeeccccCCCeEE
Confidence 99433 1 2244678999999999999954 568899999999999986543 355788999999999999964 488
Q ss_pred EEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccce
Q 018675 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258 (352)
Q Consensus 179 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (352)
++||.||.|++||.+.... .+.++ .|+.+|-++.+=|.|..+|+++. +.||+||+-... +
T Consensus 170 vtGsYDg~vrl~DtR~~~~----~v~el-----nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~----------q 229 (487)
T KOG0310|consen 170 VTGSYDGKVRLWDTRSLTS----RVVEL-----NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGG----------Q 229 (487)
T ss_pred EecCCCceEEEEEeccCCc----eeEEe-----cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCc----------e
Confidence 9999999999998765431 12333 58999999999999999998874 689999974221 1
Q ss_pred eeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEe
Q 018675 259 HLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA 337 (352)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~ 337 (352)
.++.+ ..|..+++++.+..++ .|++++-|+.+++|+.+.. + .+. .....++|.+++.+|+++ .++.|
T Consensus 230 ll~~~-~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~--------K-vv~-s~~~~~pvLsiavs~dd~-t~viG 297 (487)
T KOG0310|consen 230 LLTSM-FNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY--------K-VVH-SWKYPGPVLSIAVSPDDQ-TVVIG 297 (487)
T ss_pred ehhhh-hcccceEEEEEeecCCceEeecccccceEEEEccce--------E-EEE-eeecccceeeEEecCCCc-eEEEe
Confidence 11222 2277889999988765 8999999999999975431 1 111 124568999999999886 46789
Q ss_pred cCCCeEEE
Q 018675 338 SDDGMIKI 345 (352)
Q Consensus 338 ~~Dg~i~i 345 (352)
-.||.+.+
T Consensus 298 msnGlv~~ 305 (487)
T KOG0310|consen 298 MSNGLVSI 305 (487)
T ss_pred cccceeee
Confidence 99998765
No 89
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=4.5e-25 Score=201.95 Aligned_cols=216 Identities=19% Similarity=0.325 Sum_probs=158.7
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee-e---eeeeeeecceecceEEEEECCCCC
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF-W---NCKAVLEEMHTRTVRSCAWSPSGK 87 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~-~---~~~~~~~~~h~~~v~~~~~s~~~~ 87 (352)
..+..+.||.+.|++++|+|.. +.+|||||.|++|++|++.+.... . .+.. ....|...|.+++|+|++.
T Consensus 65 ~~v~~L~gH~~~V~~lafsP~~-----~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~-~L~gH~~~V~sVaf~P~g~ 138 (568)
T PTZ00420 65 PPVIKLKGHTSSILDLQFNPCF-----SEILASGSEDLTIRVWEIPHNDESVKEIKDPQC-ILKGHKKKISIIDWNPMNY 138 (568)
T ss_pred ceEEEEcCCCCCEEEEEEcCCC-----CCEEEEEeCCCeEEEEECCCCCccccccccceE-EeecCCCcEEEEEECCCCC
Confidence 3456789999999999999964 368999999999999998754211 0 1111 1245889999999999987
Q ss_pred E-EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 88 L-LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 88 ~-l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
. |++++.|++|++||..++.. ...+. |...|.+++|+|+|.+|++++.|++|++||++.+. .+..+.+|...+
T Consensus 139 ~iLaSgS~DgtIrIWDl~tg~~--~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~---~i~tl~gH~g~~ 212 (568)
T PTZ00420 139 YIMCSSGFDSFVNIWDIENEKR--AFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQE---IASSFHIHDGGK 212 (568)
T ss_pred eEEEEEeCCCeEEEEECCCCcE--EEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCc---EEEEEecccCCc
Confidence 5 57899999999999877642 33443 56789999999999999999999999999997654 345677887654
Q ss_pred eE-----EEEcCCCCEEEEEeCCC----cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCc
Q 018675 167 KM-----VQWHPTMDVLFSCSYDN----TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237 (352)
Q Consensus 167 ~~-----~~~~~~~~~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~ 237 (352)
.. ..|++++.++++++.|+ .|++||+..... .+... ....+...+...-..+++.++++|+.|+.
T Consensus 213 ~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~----pl~~~--~ld~~~~~L~p~~D~~tg~l~lsGkGD~t 286 (568)
T PTZ00420 213 NTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTS----ALVTM--SIDNASAPLIPHYDESTGLIYLIGKGDGN 286 (568)
T ss_pred eeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCC----ceEEE--EecCCccceEEeeeCCCCCEEEEEECCCe
Confidence 32 34568888999988774 799999775321 11221 11123333333334556899999999999
Q ss_pred EEEEcCCc
Q 018675 238 IKIWGADI 245 (352)
Q Consensus 238 i~iwd~~~ 245 (352)
|++|++..
T Consensus 287 Ir~~e~~~ 294 (568)
T PTZ00420 287 CRYYQHSL 294 (568)
T ss_pred EEEEEccC
Confidence 99998753
No 90
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.95 E-value=7e-26 Score=186.56 Aligned_cols=251 Identities=24% Similarity=0.399 Sum_probs=179.2
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
..|+.+|.+++.+|+.++++||+.|....+|+..+++ ....+.+|...|+++.|+.+|.+|+||+.+|.|+||+...+
T Consensus 61 ~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge--~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg 138 (399)
T KOG0296|consen 61 DKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE--FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTG 138 (399)
T ss_pred hhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc--ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccC
Confidence 4599999999999999999999999999999988876 56788999999999999999999999999999999998766
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
.. ...+......+..+.|||....|++|+.||.+-+|.+.+.. ..+...||..++++=.|.|+|+.++
T Consensus 139 ~~---~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~---------~~kv~~Gh~~~ct~G~f~pdGKr~~ 206 (399)
T KOG0296|consen 139 GE---QWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQA---------LCKVMSGHNSPCTCGEFIPDGKRIL 206 (399)
T ss_pred ce---EEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcc---------eeeEecCCCCCcccccccCCCceEE
Confidence 43 23333445678899999999999999999999999776531 1123458999999999999999999
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCcccc--Cccc
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLID--GPSY 307 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~--~~~~ 307 (352)
++..||+|++|++.... +++.+..........+.....+ .+..|+.++.+.+.......+.. ....
T Consensus 207 tgy~dgti~~Wn~ktg~-----------p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~ 275 (399)
T KOG0296|consen 207 TGYDDGTIIVWNPKTGQ-----------PLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTV 275 (399)
T ss_pred EEecCceEEEEecCCCc-----------eeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCC
Confidence 99999999999876432 2222221111122222223222 45555566655554332211111 0011
Q ss_pred ceeeecccccCcceeEE---EecCCCcceEEEecCCCeEEEEeecc
Q 018675 308 KMLLKKEKAHDMDVNSV---QWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 308 ~~~~~~~~~h~~~i~~~---~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..+ ...+...+.++ .|+..= .+.|+|+.||+|.|||.+.
T Consensus 276 ~~l---~~~~e~~~esve~~~~ss~l-pL~A~G~vdG~i~iyD~a~ 317 (399)
T KOG0296|consen 276 PEL---KPSQEELDESVESIPSSSKL-PLAACGSVDGTIAIYDLAA 317 (399)
T ss_pred ccc---cccchhhhhhhhhccccccc-chhhcccccceEEEEeccc
Confidence 111 12333344444 444443 4788999999999999865
No 91
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=7.1e-25 Score=200.67 Aligned_cols=250 Identities=17% Similarity=0.289 Sum_probs=172.9
Q ss_pred EeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCCCcEEEEEccCCce------eeeEeecc
Q 018675 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDY------ECVATLEG 116 (352)
Q Consensus 44 s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~~~~~~------~~~~~~~~ 116 (352)
+|+.++.+++|+...... ...+ ..|.+.|.+++|+|+ +.+|++|+.|++|++|+...+.. .+...+.+
T Consensus 49 gGG~~gvI~L~~~~r~~~----v~~L-~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~g 123 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPP----VIKL-KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKG 123 (568)
T ss_pred CCCceeEEEeeecCCCce----EEEE-cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeec
Confidence 356788899998765321 1122 458899999999997 78999999999999999864321 23446788
Q ss_pred ccCCeeEEEECCCCcE-EEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q 018675 117 HENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195 (352)
Q Consensus 117 h~~~v~~v~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 195 (352)
|...|.+++|+|++.. |++++.|++|++||+..+.. ...+. |...|.+++|+|++.+|++++.|+.|++||+...
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~---~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKR---AFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcE---EEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCC
Confidence 9999999999998875 57899999999999976542 23333 4567999999999999999999999999987653
Q ss_pred CCCCceeEeeeeccCCCCcccE-----EEEEEcCCCCEEEEEeCCC----cEEEEcCCccccccCCCCccceeeEEeec-
Q 018675 196 DSDNWHCVQTISESNNGHSSTI-----WALSFNAKGDKLVSCSDDL----TIKIWGADITRMQSGDGYASWRHLCTISG- 265 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~~~h~~~i-----~~l~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~- 265 (352)
. .+.++ .+|...+ +...|++++.+|+++|.|+ .|+|||++... ..+..+..
T Consensus 200 ~-----~i~tl----~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~----------~pl~~~~ld 260 (568)
T PTZ00420 200 E-----IASSF----HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTT----------SALVTMSID 260 (568)
T ss_pred c-----EEEEE----ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCC----------CceEEEEec
Confidence 2 22333 2565543 3345678999999988774 79999986311 11111111
Q ss_pred ccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCC
Q 018675 266 YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329 (352)
Q Consensus 266 ~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~ 329 (352)
.....+......+.+ ++++|+.|+++++|+.....+ .. +.. ..+..++..++|.|.
T Consensus 261 ~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~------~~-l~~-~~s~~p~~g~~f~Pk 317 (568)
T PTZ00420 261 NASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSI------RK-VNE-YKSCSPFRSFGFLPK 317 (568)
T ss_pred CCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcE------Ee-ecc-cccCCCccceEEccc
Confidence 112222222223334 688999999999997754211 11 122 235677888999985
No 92
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.95 E-value=8.2e-26 Score=191.12 Aligned_cols=265 Identities=21% Similarity=0.367 Sum_probs=200.0
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceee------eeeeeeecceecceEEEEECCCC-CEEEE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW------NCKAVLEEMHTRTVRSCAWSPSG-KLLAT 91 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~------~~~~~~~~~h~~~v~~~~~s~~~-~~l~s 91 (352)
-|.+.|+.+..-|.. ...+||.+..+.+.|||........ .+...+ ..|++.=+.++|++.. -.|++
T Consensus 122 ~h~gEVnRaRymPQn-----p~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L-~gH~~eg~glsWn~~~~g~Lls 195 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQN-----PNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRL-KGHEKEGYGLSWNRQQEGTLLS 195 (422)
T ss_pred cCCccchhhhhCCCC-----CcEEEecCCCCCEEEEEeccCCCcccccccCCCceEE-EeecccccccccccccceeEee
Confidence 589999998888864 5789999999999999975432111 111122 4577767889999864 56899
Q ss_pred EeCCCcEEEEEccCCc-----eeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC
Q 018675 92 ASFDATTCIWEDVGGD-----YECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~-----~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
++.|+++++||..... ..+...+.+|...|..++|++. ..+|+++++|+.+.+||++.. ..++.....+|...
T Consensus 196 ~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~~ah~~~ 274 (422)
T KOG0264|consen 196 GSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSKPSHSVKAHSAE 274 (422)
T ss_pred ccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCCCcccccccCCc
Confidence 9999999999975432 2345667899999999999984 457999999999999999863 44555677899999
Q ss_pred eeEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEcC
Q 018675 166 VKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 166 v~~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~-~~l~s~~~dg~i~iwd~ 243 (352)
+.|++|.|- +..||+||.|++|.+||+++-.. ++.++ .+|...|..|.|+|.. ..||+++.|+++.+||+
T Consensus 275 vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~----~lh~~----e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDl 346 (422)
T KOG0264|consen 275 VNCVAFNPFNEFILATGSADKTVALWDLRNLNK----PLHTF----EGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDL 346 (422)
T ss_pred eeEEEeCCCCCceEEeccCCCcEEEeechhccc----Cceec----cCCCcceEEEEeCCCCCceeEecccCCcEEEEec
Confidence 999999995 55788999999999998876432 23333 4799999999999974 56889999999999998
Q ss_pred Ccc-cccc-CCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccC
Q 018675 244 DIT-RMQS-GDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESK 298 (352)
Q Consensus 244 ~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~ 298 (352)
..- ..+. .........+.-+-+.|...|..++|.|.. .+++++.|+.+++|....
T Consensus 347 s~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 347 SRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred cccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 642 2211 111122223333445688889999999976 899999999999997653
No 93
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=8.7e-26 Score=188.75 Aligned_cols=247 Identities=24% Similarity=0.389 Sum_probs=192.1
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccC-CceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG-GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~ 149 (352)
..|...|.-+.||++|++||+++.|.+..+|+... ...+...++.+|..+|..+.|+||.++|++|+.|..+++||+..
T Consensus 221 ~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~t 300 (519)
T KOG0293|consen 221 QDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDT 300 (519)
T ss_pred hhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCc
Confidence 45889999999999999999999999999998643 34566788999999999999999999999999999999999977
Q ss_pred CCeeEEEEEe-ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 150 GNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 150 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
+.. ...+ .++...+.+++|.||+..+++|+.|+.+.+|+........|+-. ....|.+++..+||++
T Consensus 301 gd~---~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gv---------r~~~v~dlait~Dgk~ 368 (519)
T KOG0293|consen 301 GDL---RHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGV---------RDPKVHDLAITYDGKY 368 (519)
T ss_pred chh---hhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhccccc---------ccceeEEEEEcCCCcE
Confidence 643 2222 23456788999999999999999999999998876554444322 2356999999999999
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
+++.+.|..|++++.+...... .......+.+++.+.++ +++..-.+..+.+|+..+.
T Consensus 369 vl~v~~d~~i~l~~~e~~~dr~-------------lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~-------- 427 (519)
T KOG0293|consen 369 VLLVTVDKKIRLYNREARVDRG-------------LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN-------- 427 (519)
T ss_pred EEEEecccceeeechhhhhhhc-------------cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh--------
Confidence 9999999999999864321100 01134568888888877 5566677889999976532
Q ss_pred ceeeecccccC--cceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 308 KMLLKKEKAHD--MDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 308 ~~~~~~~~~h~--~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.++.++.||. ..|-.-+|.-.+..+++|||+|+.|+||+-.++
T Consensus 428 -~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sg 472 (519)
T KOG0293|consen 428 -KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISG 472 (519)
T ss_pred -hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCC
Confidence 2344566664 345555676555568999999999999997653
No 94
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=1.9e-25 Score=194.72 Aligned_cols=301 Identities=28% Similarity=0.428 Sum_probs=210.0
Q ss_pred CccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC
Q 018675 7 GNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG 86 (352)
Q Consensus 7 ~~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 86 (352)
..|+-.+...++||++.|.||+..|. +..|++||.||+||||.+.++..+++.. ..+.|.|++|+|.+
T Consensus 386 rPFPt~~~lvyrGHtg~Vr~iSvdp~------G~wlasGsdDGtvriWEi~TgRcvr~~~------~d~~I~~vaw~P~~ 453 (733)
T KOG0650|consen 386 RPFPTRCALVYRGHTGLVRSISVDPS------GEWLASGSDDGTVRIWEIATGRCVRTVQ------FDSEIRSVAWNPLS 453 (733)
T ss_pred CCCcceeeeeEeccCCeEEEEEecCC------cceeeecCCCCcEEEEEeecceEEEEEe------ecceeEEEEecCCC
Confidence 34555667788999999999999986 6899999999999999999986654432 24579999999987
Q ss_pred C--EEEEEeCCCcEEEEEccCC---------------------------------c--eeeeEeeccccCCeeEEEECCC
Q 018675 87 K--LLATASFDATTCIWEDVGG---------------------------------D--YECVATLEGHENEVKSVSWNAS 129 (352)
Q Consensus 87 ~--~l~s~~~d~~i~i~~~~~~---------------------------------~--~~~~~~~~~h~~~v~~v~~~~~ 129 (352)
. .||++-.+ .+.|-+..-+ + ...+...-.|...|+.+.|+..
T Consensus 454 ~~~vLAvA~~~-~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrk 532 (733)
T KOG0650|consen 454 DLCVLAVAVGE-CVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRK 532 (733)
T ss_pred CceeEEEEecC-ceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecC
Confidence 5 34443322 2333221111 0 0012233457889999999999
Q ss_pred CcEEEEeeCC---CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeee
Q 018675 130 GTLLATCGRD---KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 206 (352)
Q Consensus 130 ~~~l~s~~~d---~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 206 (352)
|.+|++...+ ..|.|+++.....+ ..+......+.++.|||...+|++++ -+.|+||++.... ..+.+
T Consensus 533 GDYlatV~~~~~~~~VliHQLSK~~sQ---~PF~kskG~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqe-----lvKkL 603 (733)
T KOG0650|consen 533 GDYLATVMPDSGNKSVLIHQLSKRKSQ---SPFRKSKGLVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQE-----LVKKL 603 (733)
T ss_pred CceEEEeccCCCcceEEEEeccccccc---CchhhcCCceeEEEecCCCceEEEEe-ccceEEEehhHHH-----HHHHH
Confidence 9999988654 57888988654432 22333345678999999999888876 4679999865411 11111
Q ss_pred eccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEec
Q 018675 207 SESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASG 285 (352)
Q Consensus 207 ~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~ 285 (352)
......|.+++.+|.|..|+.|+.|+.+..||+++..- .+.. .-+|...+.++++.+.. .+++|
T Consensus 604 ----~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlssk----Pyk~-------lr~H~~avr~Va~H~ryPLfas~ 668 (733)
T KOG0650|consen 604 ----LTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSK----PYKT-------LRLHEKAVRSVAFHKRYPLFASG 668 (733)
T ss_pred ----hcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcc----hhHH-------hhhhhhhhhhhhhccccceeeee
Confidence 12346788999999999999999999999999875310 0111 12467788888888875 78899
Q ss_pred CCCCeEEEEEccC-CccccCcccceeeecccccCcc----eeEEEecCCCcceEEEecCCCeEEEE
Q 018675 286 AADDSVQFFVESK-DDLIDGPSYKMLLKKEKAHDMD----VNSVQWSPGERRLLASASDDGMIKIW 346 (352)
Q Consensus 286 ~~d~~v~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~----i~~~~~sp~~~~~l~s~~~Dg~i~iw 346 (352)
+.|+++.++-..- .++..++. -..+..+.+|... |.++.|+|...++ .|+|.||+|++|
T Consensus 669 sdDgtv~Vfhg~VY~Dl~qnpl-iVPlK~L~gH~~~~~~gVLd~~wHP~qpWL-fsAGAd~tirlf 732 (733)
T KOG0650|consen 669 SDDGTVIVFHGMVYNDLLQNPL-IVPLKRLRGHEKTNDLGVLDTIWHPRQPWL-FSAGADGTIRLF 732 (733)
T ss_pred cCCCcEEEEeeeeehhhhcCCc-eEeeeeccCceeecccceEeecccCCCceE-EecCCCceEEee
Confidence 9999998875431 22322222 1223456778554 9999999998775 589999999998
No 95
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=1.4e-25 Score=199.16 Aligned_cols=306 Identities=20% Similarity=0.372 Sum_probs=220.1
Q ss_pred eecCCccceEEEEEccC-CCCC--C--CccEEEEeeCCCeEEEEecCCCc--eeee----------eeee----------
Q 018675 16 TLEGHTDRVWSLAWKPT-AGVD--G--VAPVFASCSGDKTVRIWEQSASS--RFWN----------CKAV---------- 68 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~-~~~~--~--~~~~l~s~s~D~~v~~w~~~~~~--~~~~----------~~~~---------- 68 (352)
.+--|+..||++.--|- -..+ . ....|+|||.|++||+|++.... ..+. ..+.
T Consensus 364 s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~ 443 (1080)
T KOG1408|consen 364 SMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDA 443 (1080)
T ss_pred eeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhc
Confidence 33458888888876661 0000 0 13469999999999999986521 1100 0000
Q ss_pred ----eec------ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC---CCcEEEE
Q 018675 69 ----LEE------MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA---SGTLLAT 135 (352)
Q Consensus 69 ----~~~------~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~~l~s 135 (352)
+.+ .-.-.+++++.+|+|++||+|..-|++++|+...- .....++.|..+|.|+.|+. ..++|++
T Consensus 444 ~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l--~~~~~~eAHesEilcLeyS~p~~~~kLLAS 521 (1080)
T KOG1408|consen 444 SAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQEL--EYTCFMEAHESEILCLEYSFPVLTNKLLAS 521 (1080)
T ss_pred cCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhh--hhhhheecccceeEEEeecCchhhhHhhhh
Confidence 000 01235789999999999999999999999998654 34567789999999999974 3468999
Q ss_pred eeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC--CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCC
Q 018675 136 CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM--DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGH 213 (352)
Q Consensus 136 ~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h 213 (352)
++.|+.|.|+|+. +.+..+.++.+|...|+++.|--.+ ..+++++.|..|-+ +....... .... ......-.
T Consensus 522 asrdRlIHV~Dv~--rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimF-r~~qk~~~-g~~f--~r~t~t~~ 595 (1080)
T KOG1408|consen 522 ASRDRLIHVYDVK--RNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMF-RVNQKASS-GRLF--PRHTQTLS 595 (1080)
T ss_pred ccCCceEEEEecc--cccchhhhhcccccceeEEEEeecCCceEEEeccCchhhhe-ehhccccC-ceec--cccccccc
Confidence 9999999999984 4556677888999999999997665 56889999998744 32221110 0000 00000011
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeec--ccCcceEEEEecCCc-eEEecCCCCe
Q 018675 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG--YHDRTIFSVHWSREG-IIASGAADDS 290 (352)
Q Consensus 214 ~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~-~~~s~~~d~~ 290 (352)
...++.++..|..+++++++.|..|+||++...++ ...+.+ .+++.+..+..+|++ |+++.+.|++
T Consensus 596 ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq-----------~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdkt 664 (1080)
T KOG1408|consen 596 KTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQ-----------VKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKT 664 (1080)
T ss_pred cceEEEeeeCCCcceEEEEecccceEEEeccccce-----------eeeecccccCCCceEEEEECCCccEEEEeecCCc
Confidence 35788999999999999999999999999864432 122222 356778888889987 7889999999
Q ss_pred EEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 291 VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 291 v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+.+++...+ +++.+..||+..|+.+.|++|-+ .|++++.||.|.||.+..
T Consensus 665 l~~~Df~sg---------EcvA~m~GHsE~VTG~kF~nDCk-HlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 665 LCFVDFVSG---------ECVAQMTGHSEAVTGVKFLNDCK-HLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred eEEEEeccc---------hhhhhhcCcchheeeeeecccch-hheeecCCceEEEEECch
Confidence 999976543 33445679999999999999876 677999999999999853
No 96
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=3.4e-26 Score=185.92 Aligned_cols=249 Identities=19% Similarity=0.358 Sum_probs=178.0
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeee------EeeccccCCeeEEEECCCCcEEEEeeCCCcEEEE
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECV------ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW 145 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~------~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vw 145 (352)
.....+.|..|+|||++|++|+.||.|-+|+..+++...- ..+--++.+|.|++|+.+.+.+++|+.||.|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 3456788999999999999999999999999877754221 1222467899999999999999999999999999
Q ss_pred ecCCCCeeEEEEEee-cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC
Q 018675 146 EVMPGNEFECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224 (352)
Q Consensus 146 d~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~ 224 (352)
.+..+ .|+..+. +|+..|+|+.|+.++..+++++.|.++++--+.. .++++ ...||.+.|+...|.+
T Consensus 291 ri~tG---~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKS-----GK~LK----EfrGHsSyvn~a~ft~ 358 (508)
T KOG0275|consen 291 RIETG---QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKS-----GKCLK----EFRGHSSYVNEATFTD 358 (508)
T ss_pred EEecc---hHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEecccc-----chhHH----HhcCccccccceEEcC
Confidence 99766 3555554 8999999999999999999999999999984332 23333 3458999999999999
Q ss_pred CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccc
Q 018675 225 KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLI 302 (352)
Q Consensus 225 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~ 302 (352)
+|.++++++.||+|++|+.+..... .+.++. ..+-++.++..-|.+ .++.+...+++++....++.+.
T Consensus 359 dG~~iisaSsDgtvkvW~~KtteC~-----~Tfk~~-----~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVr 428 (508)
T KOG0275|consen 359 DGHHIISASSDGTVKVWHGKTTECL-----STFKPL-----GTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVR 428 (508)
T ss_pred CCCeEEEecCCccEEEecCcchhhh-----hhccCC-----CCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEe
Confidence 9999999999999999987643221 111111 122334444333322 4455555666666543322111
Q ss_pred cCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 303 DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 303 ~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.. .......+...++.+||.|.+++ ..++|+.+.-|.+..
T Consensus 429 ------sf-sSGkREgGdFi~~~lSpkGewiY-cigED~vlYCF~~~s 468 (508)
T KOG0275|consen 429 ------SF-SSGKREGGDFINAILSPKGEWIY-CIGEDGVLYCFSVLS 468 (508)
T ss_pred ------ee-ccCCccCCceEEEEecCCCcEEE-EEccCcEEEEEEeec
Confidence 10 11112234566677899998755 688999999887743
No 97
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.94 E-value=7e-25 Score=184.43 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=191.2
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+.+|+||...|+++.++|+. ..++++|.|..+++|...... ++ .....|..+|+.+..+|+|.+|++
T Consensus 252 q~l~~~~Gh~kki~~v~~~~~~------~~v~~aSad~~i~vws~~~~s----~~-~~~~~h~~~V~~ls~h~tgeYlls 320 (506)
T KOG0289|consen 252 QILATLKGHTKKITSVKFHKDL------DTVITASADEIIRVWSVPLSS----EP-TSSRPHEEPVTGLSLHPTGEYLLS 320 (506)
T ss_pred hhhhhccCcceEEEEEEeccch------hheeecCCcceEEeecccccc----Cc-cccccccccceeeeeccCCcEEEE
Confidence 4567899999999999999973 578999999999999875442 12 223458999999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
++.|+...+.|..++..-....-++..-.+++..|+|||.+|.+|..|+.|++||+.... .+..+.+|..+|+.++|
T Consensus 321 As~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~---~~a~Fpght~~vk~i~F 397 (506)
T KOG0289|consen 321 ASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT---NVAKFPGHTGPVKAISF 397 (506)
T ss_pred ecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcc---ccccCCCCCCceeEEEe
Confidence 999999999998877532222222233468999999999999999999999999997654 46778899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
+.+|-+|+++..|+.|++||++... +++ ++.- .....+.+++|.+.|.||+.++.|=+|.+++-.
T Consensus 398 sENGY~Lat~add~~V~lwDLRKl~--n~k---t~~l---~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~------- 462 (506)
T KOG0289|consen 398 SENGYWLATAADDGSVKLWDLRKLK--NFK---TIQL---DEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKK------- 462 (506)
T ss_pred ccCceEEEEEecCCeEEEEEehhhc--ccc---eeec---cccccceeEEEcCCCCeEEeecceeEEEEEecc-------
Confidence 9999999999999999999987543 222 2211 122479999999999999999888666666422
Q ss_pred CCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEE
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFF 294 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~ 294 (352)
...|.....+. .|.+....+.|... .++++++-|..++++
T Consensus 463 --~k~W~~~~~~~-~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 463 --TKSWTEIKELA-DHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred --cccceeeehhh-hcccccceeeecccceEEeeccchhheEEe
Confidence 13455443332 23334455666554 378888888887766
No 98
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.94 E-value=1.2e-25 Score=181.76 Aligned_cols=212 Identities=23% Similarity=0.434 Sum_probs=164.3
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccC------------C----ceeeeEeeccccCCeeEEEECCCCcEEE
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG------------G----DYECVATLEGHENEVKSVSWNASGTLLA 134 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~------------~----~~~~~~~~~~h~~~v~~v~~~~~~~~l~ 134 (352)
..|+.++++.+|+|||.++|+|+.|-+|+|.|.+. + .-..+.++..|..+|+++.|+|....|+
T Consensus 109 t~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILi 188 (430)
T KOG0640|consen 109 TSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILI 188 (430)
T ss_pred eecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEE
Confidence 35899999999999999999999999999998641 1 1124567778999999999999999999
Q ss_pred EeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCc
Q 018675 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214 (352)
Q Consensus 135 s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~ 214 (352)
+++.|++|+++|...... +..........++.++.|+|.|.+|+.|..-..+++||+.. ++|...-. ...+|.
T Consensus 189 S~srD~tvKlFDfsK~sa-KrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T-----~Qcfvsan-Pd~qht 261 (430)
T KOG0640|consen 189 SGSRDNTVKLFDFSKTSA-KRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNT-----YQCFVSAN-PDDQHT 261 (430)
T ss_pred eccCCCeEEEEecccHHH-HHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccc-----eeEeeecC-cccccc
Confidence 999999999999853221 11111223456899999999999999999999999997654 34443222 345799
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEE
Q 018675 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFF 294 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~ 294 (352)
..|+++.+++.+.+.++++.||.||+||--..+ .|
T Consensus 262 ~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~r----------------------Cv----------------------- 296 (430)
T KOG0640|consen 262 GAITQVRYSSTGSLYVTASKDGAIKLWDGVSNR----------------------CV----------------------- 296 (430)
T ss_pred cceeEEEecCCccEEEEeccCCcEEeeccccHH----------------------HH-----------------------
Confidence 999999999999999999999999999731100 00
Q ss_pred EccCCccccCcccceeeeccccc-CcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 295 VESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
......| ...|.++.|.-+++ ++.|.|.|.++++|++..+
T Consensus 297 ----------------~t~~~AH~gsevcSa~Ftkn~k-yiLsSG~DS~vkLWEi~t~ 337 (430)
T KOG0640|consen 297 ----------------RTIGNAHGGSEVCSAVFTKNGK-YILSSGKDSTVKLWEISTG 337 (430)
T ss_pred ----------------HHHHhhcCCceeeeEEEccCCe-EEeecCCcceeeeeeecCC
Confidence 0011244 35799999999886 5679999999999999764
No 99
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=7.2e-25 Score=185.61 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=194.1
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCcee---------------eeEee-ccccCCeeEEEECCCCcEEE
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYE---------------CVATL-EGHENEVKSVSWNASGTLLA 134 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~---------------~~~~~-~~h~~~v~~v~~~~~~~~l~ 134 (352)
..|..++.+++++|++.+..+++.|++|.-|+..++... +...- ++|...+.+++.+++|.+|+
T Consensus 139 ~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyla 218 (479)
T KOG0299|consen 139 GKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLA 218 (479)
T ss_pred ccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEE
Confidence 458889999999999999999999999999987654311 00111 37888999999999999999
Q ss_pred EeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCc
Q 018675 135 TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214 (352)
Q Consensus 135 s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~ 214 (352)
+|+.|..|.||+.++.. .+..+.+|...|.+++|...-..+++++.|+.+++|++... .+.+...+|+
T Consensus 219 tgg~d~~v~Iw~~~t~e---hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~---------s~vetlyGHq 286 (479)
T KOG0299|consen 219 TGGRDRHVQIWDCDTLE---HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL---------SYVETLYGHQ 286 (479)
T ss_pred ecCCCceEEEecCcccc---hhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh---------HHHHHHhCCc
Confidence 99999999999987554 35568899999999999877678999999999999976432 2234556999
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEE
Q 018675 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFF 294 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~ 294 (352)
..|.+|.....++.+-.|+.|+++++|++.... +. +...+...+-++++-.+..+++|+.||.|.+|
T Consensus 287 d~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees----------ql---ifrg~~~sidcv~~In~~HfvsGSdnG~IaLW 353 (479)
T KOG0299|consen 287 DGVLGIDALSRERCVTVGGRDRTVRLWKIPEES----------QL---IFRGGEGSIDCVAFINDEHFVSGSDNGSIALW 353 (479)
T ss_pred cceeeechhcccceEEeccccceeEEEeccccc----------ee---eeeCCCCCeeeEEEecccceeeccCCceEEEe
Confidence 999999888777776677799999999873110 01 11124557888888888899999999999999
Q ss_pred EccCC-ccccCcccceeeecc--cccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 295 VESKD-DLIDGPSYKMLLKKE--KAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 295 ~~~~~-~~~~~~~~~~~~~~~--~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
...+. .++.....+.+.... ..+...|++++..|.. .++|||+.+|.||+|.+...
T Consensus 354 s~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~s-dL~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 354 SLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGS-DLLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred eecccCceeEeeccccccCCccccccccceeeeEecccC-ceEEecCCCCceEEEEecCC
Confidence 76432 222222222222111 2334589999999965 58999999999999998754
No 100
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.94 E-value=2.6e-24 Score=172.86 Aligned_cols=302 Identities=20% Similarity=0.325 Sum_probs=206.7
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce------eeeeee----eeecceecceEEEEECC-CCC
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR------FWNCKA----VLEEMHTRTVRSCAWSP-SGK 87 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~------~~~~~~----~~~~~h~~~v~~~~~s~-~~~ 87 (352)
.|-+.|+++...|.. +.++++|+.||.+.+||++.... +.+.+. ..+..|+-.|.++.|=| |..
T Consensus 41 ~HgGsvNsL~id~te-----grymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtG 115 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTE-----GRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTG 115 (397)
T ss_pred cCCCccceeeecccc-----ceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCc
Confidence 588999999998875 68999999999999999875421 111111 12345778899999988 667
Q ss_pred EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC---CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
++.++++|.++++||..+.+ ....++ -.+.|.+-+++|- ..++++|..|-.|++-|+..+. +-+.+.+|.+
T Consensus 116 mFtssSFDhtlKVWDtnTlQ--~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs---~sH~LsGHr~ 189 (397)
T KOG4283|consen 116 MFTSSSFDHTLKVWDTNTLQ--EAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGS---FSHTLSGHRD 189 (397)
T ss_pred eeecccccceEEEeecccce--eeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCc---ceeeeccccC
Confidence 88999999999999965543 233332 3567888888873 4578888889999999998764 5678999999
Q ss_pred CeeEEEEcCCCCE-EEEEeCCCcEEEEecCCCC-------CCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 165 DVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTD-------SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 165 ~v~~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~-------~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
.|.++.|+|...+ |++|+.|+.|++||++... ..+.+... +.+...+|-+.|+.++|..++.++++++.|.
T Consensus 190 ~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p-~~~~n~ah~gkvngla~tSd~~~l~~~gtd~ 268 (397)
T KOG4283|consen 190 GVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPP-ILKTNTAHYGKVNGLAWTSDARYLASCGTDD 268 (397)
T ss_pred ceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCc-cccccccccceeeeeeecccchhhhhccCcc
Confidence 9999999998764 7899999999999987641 11111111 1123457889999999999999999999999
Q ss_pred cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccc
Q 018675 237 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA 316 (352)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (352)
++++|.....+- ...+.. +.+..+..+ ..+ .+.....+.++-.-.++.+.++..... ..+....+
T Consensus 269 r~r~wn~~~G~n-tl~~~g---~~~~n~~~~-~~~-~~~~~~s~vfv~~p~~~~lall~~~sg---------s~ir~l~~ 333 (397)
T KOG4283|consen 269 RIRVWNMESGRN-TLREFG---PIIHNQTTS-FAV-HIQSMDSDVFVLFPNDGSLALLNLLEG---------SFVRRLST 333 (397)
T ss_pred ceEEeecccCcc-cccccc---ccccccccc-ceE-EEeecccceEEEEecCCeEEEEEccCc---------eEEEeeec
Confidence 999997643211 110000 000000000 000 011112233443444466666543221 23445667
Q ss_pred cCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 317 HDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 317 h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
|-..|++.++-|+=++ ..++..|+.|..|..
T Consensus 334 h~k~i~c~~~~~~fq~-~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 334 HLKRINCAAYRPDFEQ-CFTGDMNGNIYMWSP 364 (397)
T ss_pred ccceeeEEeecCchhh-hhccccCCccccccc
Confidence 8888999999987655 458999999999976
No 101
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.94 E-value=2.5e-24 Score=196.36 Aligned_cols=242 Identities=31% Similarity=0.493 Sum_probs=189.5
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
...+.||.+.|+++++... +..+++||.|+++++||..++.. ...+ ..|...|.++... +..+++|+
T Consensus 242 ~~~l~GH~g~V~~l~~~~~------~~~lvsgS~D~t~rvWd~~sg~C----~~~l-~gh~stv~~~~~~--~~~~~sgs 308 (537)
T KOG0274|consen 242 LTRLVGHFGGVWGLAFPSG------GDKLVSGSTDKTERVWDCSTGEC----THSL-QGHTSSVRCLTID--PFLLVSGS 308 (537)
T ss_pred EeeccCCCCCceeEEEecC------CCEEEEEecCCcEEeEecCCCcE----EEEe-cCCCceEEEEEcc--CceEeecc
Confidence 3449999999999999753 36899999999999999888753 3333 3588888887654 45778899
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.|.++++|+..++ .++.++.+|.++|+++..+ +.++++|+.|++|++||+. ..+++..+.+|...|.++.+.+
T Consensus 309 ~D~tVkVW~v~n~--~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~---~~~cl~sl~gH~~~V~sl~~~~ 381 (537)
T KOG0274|consen 309 RDNTVKVWDVTNG--ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR---TGKCLKSLSGHTGRVYSLIVDS 381 (537)
T ss_pred CCceEEEEeccCc--ceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhh---hceeeeeecCCcceEEEEEecC
Confidence 9999999998866 4577778899999999987 7899999999999999986 3468899999999999998866
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCC
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG 253 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (352)
. ..+++|+.|+.|++||+.... +|++++ .+|..-+..+.+ .+++|++++.|++|++||.+....
T Consensus 382 ~-~~~~Sgs~D~~IkvWdl~~~~----~c~~tl----~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~----- 445 (537)
T KOG0274|consen 382 E-NRLLSGSLDTTIKVWDLRTKR----KCIHTL----QGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGEC----- 445 (537)
T ss_pred c-ceEEeeeeccceEeecCCchh----hhhhhh----cCCccccccccc--ccceeEeccccccEEEeecccCce-----
Confidence 5 789999999999999876531 455555 368877766554 577899999999999998754321
Q ss_pred CccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccC
Q 018675 254 YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESK 298 (352)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~ 298 (352)
...+.+.+...+..+... +..+++++.++++++|+...
T Consensus 446 ------~~~~~~~~~~~v~~l~~~-~~~il~s~~~~~~~l~dl~~ 483 (537)
T KOG0274|consen 446 ------LRTLEGRHVGGVSALALG-KEEILCSSDDGSVKLWDLRS 483 (537)
T ss_pred ------eeeeccCCcccEEEeecC-cceEEEEecCCeeEEEeccc
Confidence 122222233456666554 56889999999999996654
No 102
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.2e-23 Score=170.10 Aligned_cols=279 Identities=17% Similarity=0.225 Sum_probs=191.7
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
.+.|+++.|+|.. ..|+.+|+||++++|+...... . .+..|..++.+|+|.+ ...+++|+.||.|+.
T Consensus 13 ~d~IS~v~f~~~~------~~LLvssWDgslrlYdv~~~~l----~--~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~ 79 (323)
T KOG1036|consen 13 EDGISSVKFSPSS------SDLLVSSWDGSLRLYDVPANSL----K--LKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRR 79 (323)
T ss_pred hhceeeEEEcCcC------CcEEEEeccCcEEEEeccchhh----h--hheecCCceeeeeccC-CceEEEeccCceEEE
Confidence 6789999999863 4667778999999999876521 1 2234889999999997 456789999999999
Q ss_pred EEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEE
Q 018675 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 180 (352)
+|..+++. ..+..|..+|.|+.+++....+++||+|++|++||.+... +...+. ....|-+++. .++.|++
T Consensus 80 ~Dln~~~~---~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~---~~~~~d-~~kkVy~~~v--~g~~LvV 150 (323)
T KOG1036|consen 80 YDLNTGNE---DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKV---VVGTFD-QGKKVYCMDV--SGNRLVV 150 (323)
T ss_pred EEecCCcc---eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccc---cccccc-cCceEEEEec--cCCEEEE
Confidence 99887653 3456799999999999988889999999999999986421 111111 1224555444 5678999
Q ss_pred EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceee
Q 018675 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHL 260 (352)
Q Consensus 181 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 260 (352)
|..++.+.+||++.-+.. +..........+.+|++.|++.-++.++-||+|.+=.++.....+...+.---+.
T Consensus 151 g~~~r~v~iyDLRn~~~~-------~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr 223 (323)
T KOG1036|consen 151 GTSDRKVLIYDLRNLDEP-------FQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHR 223 (323)
T ss_pred eecCceEEEEEcccccch-------hhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeee
Confidence 999999999998763221 1111223456789999999988899999999988755443211000000000000
Q ss_pred EEeec-ccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEec
Q 018675 261 CTISG-YHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 338 (352)
Q Consensus 261 ~~~~~-~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~ 338 (352)
....+ ...-+|.+++|+|- +.+++|+.||.|.+|+... .+. +.++..-...|-.++|+.+|. +||.++
T Consensus 224 ~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~--------rKr-l~q~~~~~~SI~slsfs~dG~-~LAia~ 293 (323)
T KOG1036|consen 224 LSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFN--------RKR-LKQLAKYETSISSLSFSMDGS-LLAIAS 293 (323)
T ss_pred cccCCceEEEEeceeEeccccceEEecCCCceEEEccCcc--------hhh-hhhccCCCCceEEEEeccCCC-eEEEEe
Confidence 00000 00124667888885 6899999999999995432 122 223444566799999999997 466554
No 103
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.94 E-value=1.5e-24 Score=192.00 Aligned_cols=239 Identities=23% Similarity=0.387 Sum_probs=190.6
Q ss_pred eeeecCCccceEE-EEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 14 IQTLEGHTDRVWS-LAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 14 ~~~~~gH~~~V~~-i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
...+++|.+.|.+ +++-+.+ .-.+.+|+.|.++.+|.......++. + +.|+..|.+++...++. +++|
T Consensus 50 ~~~~~~~~g~i~~~i~y~e~~-----~~~l~~g~~D~~i~v~~~~~~~P~~~----L-kgH~snVC~ls~~~~~~-~iSg 118 (745)
T KOG0301|consen 50 THAFEGPKGFIANSICYAESD-----KGRLVVGGMDTTIIVFKLSQAEPLYT----L-KGHKSNVCSLSIGEDGT-LISG 118 (745)
T ss_pred ceecccCcceeeccceecccc-----CcceEeecccceEEEEecCCCCchhh----h-hccccceeeeecCCcCc-eEec
Confidence 3568889998887 8887643 34699999999999999887654332 2 45999999998777777 8999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
|+|.++++|... ++...+++|+..|+++..-|.+ .++|||.|++|++|.-. ..+.++.+|..-|+.+++-
T Consensus 119 SWD~TakvW~~~----~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~~-----~~l~tf~gHtD~VRgL~vl 188 (745)
T KOG0301|consen 119 SWDSTAKVWRIG----ELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKGG-----TLLKTFSGHTDCVRGLAVL 188 (745)
T ss_pred ccccceEEecch----hhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccCC-----chhhhhccchhheeeeEEe
Confidence 999999999642 3455689999999999998887 78999999999999842 3567899999999999998
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCC
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (352)
|+. .+++++.||.|+.|++... ++.+ ..+|++-|++++..+++..++++|+|++++||+.....
T Consensus 189 ~~~-~flScsNDg~Ir~w~~~ge------~l~~----~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e~~----- 252 (745)
T KOG0301|consen 189 DDS-HFLSCSNDGSIRLWDLDGE------VLLE----MHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKDECV----- 252 (745)
T ss_pred cCC-CeEeecCCceEEEEeccCc------eeee----eeccceEEEEEEecCCCCeEEEecCCceEEEeecCceE-----
Confidence 764 4789999999999987432 2222 24899999999988888999999999999999754110
Q ss_pred CCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccC
Q 018675 253 GYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESK 298 (352)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~ 298 (352)
+. + ......++++..-+++.++.|++||.+++|...+
T Consensus 253 ------q~--I-~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 253 ------QV--I-TLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred ------EE--E-ecCccceEEEEEeeCCCEEEeccCceEEEEEecc
Confidence 00 0 1123468888888899999999999999997653
No 104
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.94 E-value=1.4e-24 Score=185.72 Aligned_cols=292 Identities=17% Similarity=0.304 Sum_probs=216.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeec-ceecceEEEEECCCCCEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE-MHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~ 90 (352)
+.+.+| .|-+-|-+++.+.. ..+++||+ -|.|+|||+...... .+...+.- .-...|++|.+.|||+.|+
T Consensus 411 rq~~tL-~HGEvVcAvtIS~~------trhVyTgG-kgcVKVWdis~pg~k-~PvsqLdcl~rdnyiRSckL~pdgrtLi 481 (705)
T KOG0639|consen 411 RQINTL-AHGEVVCAVTISNP------TRHVYTGG-KGCVKVWDISQPGNK-SPVSQLDCLNRDNYIRSCKLLPDGRTLI 481 (705)
T ss_pred Hhhhhh-ccCcEEEEEEecCC------cceeEecC-CCeEEEeeccCCCCC-CccccccccCcccceeeeEecCCCceEE
Confidence 334444 47777777777653 36788874 689999998754211 11111111 1246799999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+|+.-.++.|||...........+....-...+++.+||.+..++|..||.|.|||+... ..+..+++|+..+.|+.
T Consensus 482 vGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq---~~VrqfqGhtDGascId 558 (705)
T KOG0639|consen 482 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCID 558 (705)
T ss_pred eccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccc---eeeecccCCCCCceeEE
Confidence 999999999999865543333334433344567888999999999999999999999643 35678999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
.++++..|.+|+-|++++.||++..+. +.+ -...+.|.+|.++|+++.++.|..++.+-+-......
T Consensus 559 is~dGtklWTGGlDntvRcWDlregrq--------lqq--hdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~--- 625 (705)
T KOG0639|consen 559 ISKDGTKLWTGGLDNTVRCWDLREGRQ--------LQQ--HDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE--- 625 (705)
T ss_pred ecCCCceeecCCCccceeehhhhhhhh--------hhh--hhhhhhheecccCCCccceeeecccCcEEEEecCCcc---
Confidence 999999999999999999998776432 111 1245789999999999999999999999887653211
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCC
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~ 329 (352)
.-...-|+..|.++.|.+-| .+++.+-|+.+..|.... ...+++ ......|+++..|.|
T Consensus 626 ----------kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPy--------GasiFq--skE~SsVlsCDIS~d 685 (705)
T KOG0639|consen 626 ----------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY--------GASIFQ--SKESSSVLSCDISFD 685 (705)
T ss_pred ----------ceeecccccEEEEEEecccCceeeecCchhhhhhccCcc--------ccceee--ccccCcceeeeeccC
Confidence 11123478889999999876 678888898888884322 122322 234568999999998
Q ss_pred CcceEEEecCCCeEEEEeec
Q 018675 330 ERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 330 ~~~~l~s~~~Dg~i~iw~~~ 349 (352)
++ +++||+.|+...||++.
T Consensus 686 dk-yIVTGSGdkkATVYeV~ 704 (705)
T KOG0639|consen 686 DK-YIVTGSGDKKATVYEVI 704 (705)
T ss_pred ce-EEEecCCCcceEEEEEe
Confidence 76 78999999999999875
No 105
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.93 E-value=3.1e-23 Score=187.25 Aligned_cols=315 Identities=18% Similarity=0.249 Sum_probs=230.2
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecce-ecceEEEEECCCCC-EE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH-TRTVRSCAWSPSGK-LL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~-~l 89 (352)
+++.+++++...|+++.-+|- -+.+|.|-.+|+|.++++..++.+.+. .| .++|++++|..||+ .+
T Consensus 193 K~v~~f~~~~s~IT~ieqsPa------LDVVaiG~~~G~ViifNlK~dkil~sF------k~d~g~VtslSFrtDG~p~l 260 (910)
T KOG1539|consen 193 KVVYTFQEFFSRITAIEQSPA------LDVVAIGLENGTVIIFNLKFDKILMSF------KQDWGRVTSLSFRTDGNPLL 260 (910)
T ss_pred cEEEEecccccceeEeccCCc------ceEEEEeccCceEEEEEcccCcEEEEE------EccccceeEEEeccCCCeeE
Confidence 667889999999999988885 478999999999999999877654332 24 38999999999996 56
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe-eEEEEEeecCccCeeE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKM 168 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~h~~~v~~ 168 (352)
++|...|.+.+||....+. .......|.+.|....|-|....+++++.|+++++|-...+.. ...++.-.||..+-.+
T Consensus 261 as~~~~G~m~~wDLe~kkl-~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~ 339 (910)
T KOG1539|consen 261 ASGRSNGDMAFWDLEKKKL-INVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSC 339 (910)
T ss_pred EeccCCceEEEEEcCCCee-eeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchh
Confidence 7777789999999876543 2334457889999999999999999999999999885442221 1234556789999999
Q ss_pred EEEc-CCCCEEEEEeCCCcEEEEecCCCCC---------------CC------------------------cee------
Q 018675 169 VQWH-PTMDVLFSCSYDNTIKVWWAEDTDS---------------DN------------------------WHC------ 202 (352)
Q Consensus 169 ~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~---------------~~------------------------~~~------ 202 (352)
+.|. .++..+.+++.|++++.+.+..... .+ |..
T Consensus 340 irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~ 419 (910)
T KOG1539|consen 340 IRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHK 419 (910)
T ss_pred eeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEec
Confidence 9997 5778899999999887774321000 00 000
Q ss_pred ----Eeeee--cc-----------CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEe--
Q 018675 203 ----VQTIS--ES-----------NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTI-- 263 (352)
Q Consensus 203 ----~~~~~--~~-----------~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-- 263 (352)
..+.. .. .+.-...+.+++.++-|++.+.|...|.|-+|++... ....++
T Consensus 420 ~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSG-----------i~r~sf~~ 488 (910)
T KOG1539|consen 420 GKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSG-----------IHRKSFGD 488 (910)
T ss_pred CcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccC-----------eeeccccc
Confidence 00000 00 0012357888999999999999999999999976422 111222
Q ss_pred ecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccC--------------------------------ccccee
Q 018675 264 SGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDG--------------------------------PSYKML 310 (352)
Q Consensus 264 ~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~--------------------------------~~~~~~ 310 (352)
...|..++..++.+.-+ .+++++.+|.+.+|+.++..+... ...+.+
T Consensus 489 ~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kv 568 (910)
T KOG1539|consen 489 SPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKV 568 (910)
T ss_pred CccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhh
Confidence 23578889999887744 789999999999998776442110 001223
Q ss_pred eecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 311 ~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
..++.||+..|++++|||||++ |++++.|++||+||+..+
T Consensus 569 vR~f~gh~nritd~~FS~DgrW-lisasmD~tIr~wDlpt~ 608 (910)
T KOG1539|consen 569 VREFWGHGNRITDMTFSPDGRW-LISASMDSTIRTWDLPTG 608 (910)
T ss_pred hHHhhccccceeeeEeCCCCcE-EEEeecCCcEEEEeccCc
Confidence 3456799999999999999986 679999999999999764
No 106
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1.6e-24 Score=175.74 Aligned_cols=257 Identities=24% Similarity=0.378 Sum_probs=197.3
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEe----cCCCce--------------------------
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE----QSASSR-------------------------- 61 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~----~~~~~~-------------------------- 61 (352)
.++.++.||.+.|+||.|+|. +.+++|+|.|++..||. ++.+..
T Consensus 181 ~CL~~Y~GH~GSVNsikfh~s------~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~ 254 (481)
T KOG0300|consen 181 ACLATYTGHTGSVNSIKFHNS------GLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSE 254 (481)
T ss_pred cceeeecccccceeeEEeccc------cceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccccccccc
Confidence 567789999999999999997 57999999999999996 111100
Q ss_pred -----eeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEe
Q 018675 62 -----FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136 (352)
Q Consensus 62 -----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~ 136 (352)
....+..-...|...|.++.|-..|+.++++++|.+..+||.++++ ++..+.||..+.+-++-+|...+++++
T Consensus 255 ~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge--~v~~LtGHd~ELtHcstHptQrLVvTs 332 (481)
T KOG0300|consen 255 KSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGE--VVNILTGHDSELTHCSTHPTQRLVVTS 332 (481)
T ss_pred ccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCc--eeccccCcchhccccccCCcceEEEEe
Confidence 0000000112478889999999999999999999999999999884 577889999999999999999999999
Q ss_pred eCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCccc
Q 018675 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216 (352)
Q Consensus 137 ~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (352)
+.|-+.++||.++ ....+..+++|+..|+++.|..+. .+++|+.|++|++|++.+-. . .+.++. ..++
T Consensus 333 SrDtTFRLWDFRe--aI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMR-s---plATIR-----tdS~ 400 (481)
T KOG0300|consen 333 SRDTTFRLWDFRE--AIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMR-S---PLATIR-----TDSP 400 (481)
T ss_pred ccCceeEeccchh--hcceeeeecccccceeEEEEecCC-ceeecCCCceEEEeeecccc-C---cceeee-----cCCc
Confidence 9999999999873 445678899999999999998665 57999999999999886522 1 123332 3467
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc---eEEecCCCCeEEE
Q 018675 217 IWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG---IIASGAADDSVQF 293 (352)
Q Consensus 217 i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~s~~~d~~v~~ 293 (352)
++.++.+..+..++---++..|++||++..++.... ... -..|...+.+.+|..+. -+.+++.|..+.-
T Consensus 401 ~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlP-------rts-RqgHrRMV~c~AW~eehp~cnLftcGFDR~v~g 472 (481)
T KOG0300|consen 401 ANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLP-------RTS-RQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAG 472 (481)
T ss_pred cceeEeecCCceEEeccCCceEEEEecCCCccccCC-------ccc-ccccceeeeeeeccccCcccccccccccceeee
Confidence 888999888888888888889999998754432110 000 11366678888888654 5778888888887
Q ss_pred EEc
Q 018675 294 FVE 296 (352)
Q Consensus 294 ~~~ 296 (352)
|..
T Consensus 473 W~i 475 (481)
T KOG0300|consen 473 WKI 475 (481)
T ss_pred eEe
Confidence 743
No 107
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=4.3e-24 Score=182.19 Aligned_cols=240 Identities=19% Similarity=0.290 Sum_probs=184.6
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEEEEeCC
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLATASFD 95 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d 95 (352)
+.--.+.|++++|..+ |.+||.|...|.|+++|..+.. + . .....|+.+|..+.|+|++ +.+++|+.|
T Consensus 64 ~srFk~~v~s~~fR~D------G~LlaaGD~sG~V~vfD~k~r~-i---L-R~~~ah~apv~~~~f~~~d~t~l~s~sDd 132 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSD------GRLLAAGDESGHVKVFDMKSRV-I---L-RQLYAHQAPVHVTKFSPQDNTMLVSGSDD 132 (487)
T ss_pred HHhhccceeEEEeecC------CeEEEccCCcCcEEEeccccHH-H---H-HHHhhccCceeEEEecccCCeEEEecCCC
Confidence 4446789999999987 6899999999999999955421 1 1 1225699999999999954 678888889
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
+.+++||..+.. ....+.+|+..|+|.+|+|. +..++|||.||+|++||.+... ..+..+ .|..+|-.+.+-|.
T Consensus 133 ~v~k~~d~s~a~--v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~--~~v~el-nhg~pVe~vl~lps 207 (487)
T KOG0310|consen 133 KVVKYWDLSTAY--VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT--SRVVEL-NHGCPVESVLALPS 207 (487)
T ss_pred ceEEEEEcCCcE--EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC--ceeEEe-cCCCceeeEEEcCC
Confidence 999999987654 36688999999999999995 4579999999999999997653 223333 47778999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCC
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGY 254 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 254 (352)
+..+++++ .+.+++||+..... .+ .....|...|+||.+..++..|+|++-|+.+++||+..
T Consensus 208 gs~iasAg-Gn~vkVWDl~~G~q-------ll-~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~--------- 269 (487)
T KOG0310|consen 208 GSLIASAG-GNSVKVWDLTTGGQ-------LL-TSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTN--------- 269 (487)
T ss_pred CCEEEEcC-CCeEEEEEecCCce-------eh-hhhhcccceEEEEEeecCCceEeecccccceEEEEccc---------
Confidence 99888876 56799999764321 11 11223889999999999999999999999999998532
Q ss_pred ccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEE
Q 018675 255 ASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294 (352)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~ 294 (352)
++-...+. ..++|.+++.+|++ .++.|..||.+.+-
T Consensus 270 --~Kvv~s~~--~~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 270 --YKVVHSWK--YPGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred --eEEEEeee--cccceeeEEecCCCceEEEecccceeeee
Confidence 22222221 35678899999865 78889999987654
No 108
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=6.9e-23 Score=158.91 Aligned_cols=254 Identities=22% Similarity=0.353 Sum_probs=185.7
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC----CCCEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP----SGKLL 89 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~----~~~~l 89 (352)
.++-+.|++.|+|.+|+|. ++++||||+|++|++--.........-...-..+|.+.|+.++|-. .|.+|
T Consensus 82 ~kr~khhkgsiyc~~ws~~------geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il 155 (350)
T KOG0641|consen 82 CKRNKHHKGSIYCTAWSPC------GELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAIL 155 (350)
T ss_pred eeeccccCccEEEEEecCc------cCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEE
Confidence 3456789999999999997 6899999999999997544332211112222256999999999954 24667
Q ss_pred EEEeC-CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEee----c---
Q 018675 90 ATASF-DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ----G--- 161 (352)
Q Consensus 90 ~s~~~-d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~----~--- 161 (352)
++++. |.+|.+-|..++ +....+.+|++.|.++- +-++-.|++|+.|.+|++||++-.. ++..+. +
T Consensus 156 ~s~gagdc~iy~tdc~~g--~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~---~v~~l~~~~~~~gl 229 (350)
T KOG0641|consen 156 ASAGAGDCKIYITDCGRG--QGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNS---CVNTLDNDFHDGGL 229 (350)
T ss_pred EecCCCcceEEEeecCCC--CcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccc---eeeeccCcccCCCc
Confidence 76553 666766676555 45677889999998772 3356789999999999999986432 233221 1
Q ss_pred CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 162 h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
....|.+++..|.+++|++|..|...-+||++.... ++.+ ..|...|.++.|+|...||++|+-|..|++-
T Consensus 230 essavaav~vdpsgrll~sg~~dssc~lydirg~r~-----iq~f----~phsadir~vrfsp~a~yllt~syd~~iklt 300 (350)
T KOG0641|consen 230 ESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRM-----IQRF----HPHSADIRCVRFSPGAHYLLTCSYDMKIKLT 300 (350)
T ss_pred ccceeEEEEECCCcceeeeccCCCceEEEEeeCCce-----eeee----CCCccceeEEEeCCCceEEEEecccceEEEe
Confidence 125688999999999999999999999999877532 3333 3688999999999999999999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
|+.-.-. . .........|......+.|.+.. -+++.+.|.++.+|..
T Consensus 301 dlqgdla-----~---el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 301 DLQGDLA-----H---ELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred ecccchh-----h---cCceEEEEeccCceEEEEecCccceeeeccCcceEEEecc
Confidence 8752100 0 00111223466677778899876 5888999999999943
No 109
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1e-24 Score=191.79 Aligned_cols=281 Identities=22% Similarity=0.368 Sum_probs=205.7
Q ss_pred CccEEEEeeCCCeEEEEecCCCceeeeee-eeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecc
Q 018675 38 VAPVFASCSGDKTVRIWEQSASSRFWNCK-AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG 116 (352)
Q Consensus 38 ~~~~l~s~s~D~~v~~w~~~~~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~ 116 (352)
.+.+|+|||.||.|++|+........... ....+.|..-|+.+.+.-+|+.|++++.|-+|++|+...+..-+..++..
T Consensus 36 ~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~ 115 (735)
T KOG0308|consen 36 NGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRT 115 (735)
T ss_pred CCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhc
Confidence 35689999999999999876443211111 22235688999999999999999999999999999976554456677889
Q ss_pred ccCCeeEEEE-CCCCcEEEEeeCCCcEEEEecCCCCe-------eEEEEEee-cCccCeeEEEEcCCCCEEEEEeCCCcE
Q 018675 117 HENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNE-------FECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSYDNTI 187 (352)
Q Consensus 117 h~~~v~~v~~-~~~~~~l~s~~~d~~v~vwd~~~~~~-------~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i 187 (352)
|..-|.|++. .++..++|+||-|+.|.+||+..+.. ......+. ++...+-+++..+.+..+++|+..+.+
T Consensus 116 H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~l 195 (735)
T KOG0308|consen 116 HKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDL 195 (735)
T ss_pred ccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccce
Confidence 9999999999 78889999999999999999975522 11122233 777889999999999999999999999
Q ss_pred EEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeeccc
Q 018675 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH 267 (352)
Q Consensus 188 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (352)
++||.... ..+..+ .||+..|..|..++||+.+++++.||+|++||+..++. +.++ ..|
T Consensus 196 r~wDprt~-----~kimkL----rGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrC-----------l~T~-~vH 254 (735)
T KOG0308|consen 196 RLWDPRTC-----KKIMKL----RGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRC-----------LATY-IVH 254 (735)
T ss_pred EEeccccc-----cceeee----eccccceEEEEEcCCCCeEeecCCCceEEeeeccccce-----------eeeE-Eec
Confidence 99976542 223333 38999999999999999999999999999999864322 1122 236
Q ss_pred CcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEE
Q 018675 268 DRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346 (352)
Q Consensus 268 ~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw 346 (352)
...++++..+++ ..+.+|+.|+.|..-+... .... .++.+. ..+|..+..+.+...+ -.+..|+.|+-|
T Consensus 255 ~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n-----~~~~-tlick~---daPv~~l~~~~~~~~~-WvtTtds~I~rW 324 (735)
T KOG0308|consen 255 KEGVWALQSSPSFTHVYSGGRDGNIYRTDLRN-----PAKS-TLICKE---DAPVLKLHLHEHDNSV-WVTTTDSSIKRW 324 (735)
T ss_pred cCceEEEeeCCCcceEEecCCCCcEEecccCC-----chhh-eEeecC---CCchhhhhhccccCCc-eeeeccccceec
Confidence 666898888876 4799999999988764332 1111 222222 2245556555333332 456778888888
Q ss_pred eec
Q 018675 347 ELA 349 (352)
Q Consensus 347 ~~~ 349 (352)
...
T Consensus 325 ~~~ 327 (735)
T KOG0308|consen 325 KLE 327 (735)
T ss_pred CCc
Confidence 653
No 110
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=9.7e-24 Score=186.15 Aligned_cols=239 Identities=26% Similarity=0.455 Sum_probs=187.0
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
+.+.|+++.|+++ +.+||.|-.+|.|.|||....+.. ......|...|-+++|+ +..+.+|+.|+.|.
T Consensus 216 ~~~~vtSv~ws~~------G~~LavG~~~g~v~iwD~~~~k~~----~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~ 283 (484)
T KOG0305|consen 216 GEELVTSVKWSPD------GSHLAVGTSDGTVQIWDVKEQKKT----RTLRGSHASRVGSLAWN--SSVLSSGSRDGKIL 283 (484)
T ss_pred CCCceEEEEECCC------CCEEEEeecCCeEEEEehhhcccc----ccccCCcCceeEEEecc--CceEEEecCCCcEE
Confidence 3899999999997 679999999999999998765432 11222288899999999 67899999999999
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC-CCEE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MDVL 178 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l 178 (352)
.+|....+.. ..++.+|...|+.+.|++++.+|++|+.|+.+.|||.... .+...+..|...|..++|+|- ...|
T Consensus 284 ~~dvR~~~~~-~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~---~p~~~~~~H~aAVKA~awcP~q~~lL 359 (484)
T KOG0305|consen 284 NHDVRISQHV-VSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP---EPKFTFTEHTAAVKALAWCPWQSGLL 359 (484)
T ss_pred EEEEecchhh-hhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc---cccEEEeccceeeeEeeeCCCccCce
Confidence 9998765432 2257899999999999999999999999999999998433 335567789999999999995 4577
Q ss_pred EEEe--CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE--eCCCcEEEEcCCccccccCCCC
Q 018675 179 FSCS--YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC--SDDLTIKIWGADITRMQSGDGY 254 (352)
Q Consensus 179 ~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~ 254 (352)
|+|+ .|+.|++|+.... ..+..+ .-...|.+|.|++..+.|+++ -.++.|.||+...
T Consensus 360 AsGGGs~D~~i~fwn~~~g-----~~i~~v-----dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps--------- 420 (484)
T KOG0305|consen 360 ATGGGSADRCIKFWNTNTG-----ARIDSV-----DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS--------- 420 (484)
T ss_pred EEcCCCcccEEEEEEcCCC-----cEeccc-----ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc---------
Confidence 7764 6899999987643 222222 235789999999998776653 4678999998642
Q ss_pred ccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 255 ASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
.+....+. .|...+..++++|++ .+++|+.|.++++|..
T Consensus 421 --~~~~~~l~-gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~ 460 (484)
T KOG0305|consen 421 --MKLVAELL-GHTSRVLYLALSPDGETIVTGAADETLRFWNL 460 (484)
T ss_pred --cceeeeec-CCcceeEEEEECCCCCEEEEecccCcEEeccc
Confidence 12233333 366679999999986 8999999999999943
No 111
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=6e-25 Score=188.51 Aligned_cols=213 Identities=20% Similarity=0.366 Sum_probs=156.9
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeee-eeeeeecceecceEEEEECCCCCEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN-CKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
.....+||...++|.+|+|.. ...|+|||.|+++|+|+....+.... ++........-++++|+|++||+.||+
T Consensus 260 Dm~nTKGHia~lt~g~whP~~-----k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAa 334 (641)
T KOG0772|consen 260 DMYNTKGHIAELTCGCWHPDN-----KEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAA 334 (641)
T ss_pred hhhccCCceeeeeccccccCc-----ccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhh
Confidence 344567999999999999975 46899999999999999876542111 111111123357899999999999999
Q ss_pred EeCCCcEEEEEccCCceee-eEeeccccC--CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec--CccCe
Q 018675 92 ASFDATTCIWEDVGGDYEC-VATLEGHEN--EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG--HAQDV 166 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~-~~~~~~h~~--~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--h~~~v 166 (352)
|..||+|.+|+...-...+ ...-++|.. .|+||.|+++|++|++=|.|+++++||++..+ +++....+ ....-
T Consensus 335 gc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k--kpL~~~tgL~t~~~~ 412 (641)
T KOG0772|consen 335 GCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK--KPLNVRTGLPTPFPG 412 (641)
T ss_pred cccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc--cchhhhcCCCccCCC
Confidence 9999999999864322222 234467877 89999999999999999999999999997654 33333222 23455
Q ss_pred eEEEEcCCCCEEEEEeC------CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEE
Q 018675 167 KMVQWHPTMDVLFSCSY------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~i 240 (352)
+.++|+|+.+++++|.. .+.+.+|+.. ++...+.+.. -+..|-.+.|+|.-+.++.|+.||++++
T Consensus 413 tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~-----t~d~v~ki~i----~~aSvv~~~WhpkLNQi~~gsgdG~~~v 483 (641)
T KOG0772|consen 413 TDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRM-----TLDTVYKIDI----STASVVRCLWHPKLNQIFAGSGDGTAHV 483 (641)
T ss_pred CccccCCCceEEEecccccCCCCCceEEEEecc-----ceeeEEEecC----CCceEEEEeecchhhheeeecCCCceEE
Confidence 77899999999998753 3568888432 3344444432 2466888999999888888888999988
Q ss_pred E
Q 018675 241 W 241 (352)
Q Consensus 241 w 241 (352)
+
T Consensus 484 y 484 (641)
T KOG0772|consen 484 Y 484 (641)
T ss_pred E
Confidence 7
No 112
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=4.6e-25 Score=197.50 Aligned_cols=236 Identities=19% Similarity=0.394 Sum_probs=175.9
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCCCcEEEEEcc
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDV 104 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~~ 104 (352)
.+.|...+ .+++|||+..|.|.+||+...... +.. .....|++.|+++.|++. ..+|++|+.||+|++||..
T Consensus 92 DVkW~~~~-----~NlIAT~s~nG~i~vWdlnk~~rn-k~l-~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR 164 (839)
T KOG0269|consen 92 DVKWGQLY-----SNLIATCSTNGVISVWDLNKSIRN-KLL-TVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLR 164 (839)
T ss_pred hcccccch-----hhhheeecCCCcEEEEecCccccc-hhh-hHhhhhccceeeeeeccCCccEEEecCCCceEEEEeee
Confidence 45565332 478999999999999999763111 011 122459999999999885 5789999999999999987
Q ss_pred CCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC
Q 018675 105 GGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183 (352)
Q Consensus 105 ~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 183 (352)
..+. ..+..+..+.|+.|.|+| .++.|+++.+.|.+.+||++... .+...+.+|.+.|.|+.|+|+..+||+||.
T Consensus 165 ~~~S--~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~--r~~~k~~AH~GpV~c~nwhPnr~~lATGGR 240 (839)
T KOG0269|consen 165 SKKS--KSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPD--RCEKKLTAHNGPVLCLNWHPNREWLATGGR 240 (839)
T ss_pred cccc--cccccccchhhhceeeccCCCceEEEecCCceEEEeeccCch--hHHHHhhcccCceEEEeecCCCceeeecCC
Confidence 6542 345556778999999998 57789999999999999998654 345567899999999999999999999999
Q ss_pred CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE-EEEEe--CCCcEEEEcCCccccccCCCCccceee
Q 018675 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCS--DDLTIKIWGADITRMQSGDGYASWRHL 260 (352)
Q Consensus 184 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~-l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~ 260 (352)
|+.|+||++.+.......++.+ ..+|..|.|.|...+ |++|+ .|-.|+|||++.+.. +-
T Consensus 241 DK~vkiWd~t~~~~~~~~tInT--------iapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYI----------P~ 302 (839)
T KOG0269|consen 241 DKMVKIWDMTDSRAKPKHTINT--------IAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYI----------PY 302 (839)
T ss_pred CccEEEEeccCCCccceeEEee--------cceeeeeeeccCccchhhhhhccccceEEEEeeccccc----------cc
Confidence 9999999988755544444433 368999999998765 56655 578999999864322 11
Q ss_pred EEeecccCcceEEEEecCC--ceEEecCCCCeE
Q 018675 261 CTISGYHDRTIFSVHWSRE--GIIASGAADDSV 291 (352)
Q Consensus 261 ~~~~~~~~~~i~~~~~~~~--~~~~s~~~d~~v 291 (352)
..+ ..|...+..++|... ..+.+++-|+++
T Consensus 303 ~t~-~eH~~~vt~i~W~~~d~~~l~s~sKD~tv 334 (839)
T KOG0269|consen 303 ATF-LEHTDSVTGIAWDSGDRINLWSCSKDGTV 334 (839)
T ss_pred eee-eccCccccceeccCCCceeeEeecCccHH
Confidence 222 236677778888763 245566656554
No 113
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.93 E-value=3.5e-23 Score=163.63 Aligned_cols=234 Identities=26% Similarity=0.413 Sum_probs=178.1
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
.+.||.+.|-.++|+|.. +++|++++.|+++++|+....+... .+. .++.=.-+.|+|+|.+++.++.|
T Consensus 59 ~~~gh~~svdql~w~~~~-----~d~~atas~dk~ir~wd~r~~k~~~----~i~--~~~eni~i~wsp~g~~~~~~~kd 127 (313)
T KOG1407|consen 59 VYRGHTDSVDQLCWDPKH-----PDLFATASGDKTIRIWDIRSGKCTA----RIE--TKGENINITWSPDGEYIAVGNKD 127 (313)
T ss_pred cccCCCcchhhheeCCCC-----CcceEEecCCceEEEEEeccCcEEE----Eee--ccCcceEEEEcCCCCEEEEecCc
Confidence 467999999999999975 5799999999999999988765322 221 12233456899999999999999
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 175 (352)
..|...|..+... . .-....-.++.++|+.++++|+....-|+|.|..- +..+++..+++|..++.|+.|+|++
T Consensus 128 D~it~id~r~~~~--~-~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsy---psLkpv~si~AH~snCicI~f~p~G 201 (313)
T KOG1407|consen 128 DRITFIDARTYKI--V-NEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSY---PSLKPVQSIKAHPSNCICIEFDPDG 201 (313)
T ss_pred ccEEEEEecccce--e-ehhcccceeeeeeecCCCCEEEEecCCceEEEEec---cccccccccccCCcceEEEEECCCC
Confidence 9999998765432 2 22234457888999988888777777799988664 3566788899999999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCc
Q 018675 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA 255 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (352)
+++++|+.|..+.+||+.+ ..|...+. .+.-+|..|.|+.+|++||++++|..|-|=.++... .
T Consensus 202 ryfA~GsADAlvSLWD~~E-----LiC~R~is----RldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd-------~ 265 (313)
T KOG1407|consen 202 RYFATGSADALVSLWDVDE-----LICERCIS----RLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGD-------R 265 (313)
T ss_pred ceEeeccccceeeccChhH-----hhhheeec----cccCceEEEEeccCcceeeccCccceEEeEecccCC-------e
Confidence 9999999999999997654 34544443 467899999999999999999999988877654321 1
Q ss_pred cceeeEEeecccCcceEEEEecCCce-EEecCCC
Q 018675 256 SWRHLCTISGYHDRTIFSVHWSREGI-IASGAAD 288 (352)
Q Consensus 256 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d 288 (352)
.| . ..+..+.++++|.|... ||-++.|
T Consensus 266 ~~----e--I~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 266 VW----E--IPCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred EE----E--eeccCCceeEEecCCCceeeEEecC
Confidence 11 1 12466788999999874 4444443
No 114
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=6.7e-24 Score=186.73 Aligned_cols=211 Identities=24% Similarity=0.413 Sum_probs=175.4
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEE-CCCCCEEEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAW-SPSGKLLATA 92 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~-s~~~~~l~s~ 92 (352)
+.+++.|++.|+.+..+-. ++-|+|||.|-+|++|+..... .-|...+ ..|...|.|++. .++...+|+|
T Consensus 66 ~asme~HsDWVNDiiL~~~------~~tlIS~SsDtTVK~W~~~~~~--~~c~sti-r~H~DYVkcla~~ak~~~lvaSg 136 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIILCGN------GKTLISASSDTTVKVWNAHKDN--TFCMSTI-RTHKDYVKCLAYIAKNNELVASG 136 (735)
T ss_pred hhhhhhhHhHHhhHHhhcC------CCceEEecCCceEEEeecccCc--chhHhhh-hcccchheeeeecccCceeEEec
Confidence 5677889999999988765 4689999999999999987653 1233334 459999999999 7888999999
Q ss_pred eCCCcEEEEEccCCcee--------eeEeec-cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc
Q 018675 93 SFDATTCIWEDVGGDYE--------CVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~--------~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~ 163 (352)
|.|+.|.+||...+... ....+. ++...|.+++-++.|..|++|+..+-+++||-+... .+..+.+|.
T Consensus 137 GLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~---kimkLrGHT 213 (735)
T KOG0308|consen 137 GLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCK---KIMKLRGHT 213 (735)
T ss_pred CCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEecccccc---ceeeeeccc
Confidence 99999999998755321 122233 788889999999999999999999999999976543 356678999
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
.+|+++-.+++|..++++|.||+|++|++.. .+|+.++. .|...||++..+|+-..+.+|+.||.|..=|+
T Consensus 214 dNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq-----QrCl~T~~----vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl 284 (735)
T KOG0308|consen 214 DNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ-----QRCLATYI----VHKEGVWALQSSPSFTHVYSGGRDGNIYRTDL 284 (735)
T ss_pred cceEEEEEcCCCCeEeecCCCceEEeeeccc-----cceeeeEE----eccCceEEEeeCCCcceEEecCCCCcEEeccc
Confidence 9999999999999999999999999997754 35666654 68888999999999999999999999998887
Q ss_pred Cc
Q 018675 244 DI 245 (352)
Q Consensus 244 ~~ 245 (352)
+.
T Consensus 285 ~n 286 (735)
T KOG0308|consen 285 RN 286 (735)
T ss_pred CC
Confidence 54
No 115
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=8e-23 Score=164.76 Aligned_cols=249 Identities=22% Similarity=0.378 Sum_probs=166.5
Q ss_pred eecceEEEEECC-CCCEEEEEeCCCcEEEEEccCC-ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 73 HTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGG-DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 73 h~~~v~~~~~s~-~~~~l~s~~~d~~i~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
-++.|.+++||| ...+++.+++|+++++|+.... ...+ .....|+++|.+++|+.+|..+++|+-|+.+++||+..+
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 356899999999 4566779999999999998763 3322 456679999999999999999999999999999999876
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCC--EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
+ ......|..+|..+.|-+... .|++||.|.+|++||.+... .+.++. ....+++++. ...+
T Consensus 105 Q----~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~-----pv~t~~-----LPeRvYa~Dv--~~pm 168 (347)
T KOG0647|consen 105 Q----VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN-----PVATLQ-----LPERVYAADV--LYPM 168 (347)
T ss_pred C----eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC-----eeeeee-----ccceeeehhc--cCce
Confidence 4 344567999999999987654 89999999999999876432 122221 2345666554 3557
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCccc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
++.+..++.|.+|.++....+.. .+ .+...-.+.+++.-++ ...+.|+-.|.+.+.-.......+.-..
T Consensus 169 ~vVata~r~i~vynL~n~~te~k-------~~---~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtF 238 (347)
T KOG0647|consen 169 AVVATAERHIAVYNLENPPTEFK-------RI---ESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTF 238 (347)
T ss_pred eEEEecCCcEEEEEcCCCcchhh-------hh---cCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeE
Confidence 88889999999998853211000 00 0000112333433332 2347788888777653322111110001
Q ss_pred ceeeec--ccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 308 KMLLKK--EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 308 ~~~~~~--~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+....+ ...--..|++++|+|.- ..|+|+|.||+...||-.
T Consensus 239 kCHR~~~~~~~~VYaVNsi~FhP~h-gtlvTaGsDGtf~FWDkd 281 (347)
T KOG0647|consen 239 KCHRSTNSVNDDVYAVNSIAFHPVH-GTLVTAGSDGTFSFWDKD 281 (347)
T ss_pred EEeccCCCCCCceEEecceEeeccc-ceEEEecCCceEEEecch
Confidence 110000 01113578999999965 468999999999999853
No 116
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.92 E-value=1.1e-24 Score=182.17 Aligned_cols=246 Identities=21% Similarity=0.320 Sum_probs=191.2
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
..|.+.+..+.|-++...|++|+.|..|++|+....+...+.++.+..+.|+++.|.+++.++++++.|+.+++|++...
T Consensus 172 d~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~ 251 (459)
T KOG0288|consen 172 DAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSL 251 (459)
T ss_pred hccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccch
Confidence 45889999999999989999999999999999887766677888898999999999999999999999999999998654
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
...+++.+|+..|+++.|......+++|+.|++|+.||+.. .+|..++.. .+.++.|..+ ...++
T Consensus 252 ---r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k-----~~C~kt~l~-----~S~cnDI~~~--~~~~~ 316 (459)
T KOG0288|consen 252 ---RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQK-----AYCSKTVLP-----GSQCNDIVCS--ISDVI 316 (459)
T ss_pred ---hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhh-----hheeccccc-----cccccceEec--ceeee
Confidence 34677889999999999988777799999999999997654 356655532 3456666665 45688
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccce
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
||-.|++||+||.+..... ......+.+.++..+.++ .+.+++.|.++.+++.....+....
T Consensus 317 SgH~DkkvRfwD~Rs~~~~-------------~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~---- 379 (459)
T KOG0288|consen 317 SGHFDKKVRFWDIRSADKT-------------RSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTF---- 379 (459)
T ss_pred ecccccceEEEeccCCcee-------------eEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEe----
Confidence 8889999999997643211 111123468888888877 5777799999999876543322110
Q ss_pred eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
......-...++.+.|||++. ++++||.||.|+||++..
T Consensus 380 -sA~g~k~asDwtrvvfSpd~~-YvaAGS~dgsv~iW~v~t 418 (459)
T KOG0288|consen 380 -SAEGFKCASDWTRVVFSPDGS-YVAAGSADGSVYIWSVFT 418 (459)
T ss_pred -eccccccccccceeEECCCCc-eeeeccCCCcEEEEEccC
Confidence 011111233599999999987 678999999999999864
No 117
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=7e-22 Score=160.49 Aligned_cols=246 Identities=17% Similarity=0.292 Sum_probs=173.9
Q ss_pred eecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC--CCcEEEEecCCC
Q 018675 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR--DKSVWIWEVMPG 150 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~--d~~v~vwd~~~~ 150 (352)
....|+++.|+++|..+++++.|.+++|||...+. ++.++..+.-.|..++|-...+.++.++. |.+|+.-++...
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~--~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dN 90 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK--QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDN 90 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc--eeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecC
Confidence 35689999999999999999999999999988774 45566666678888999665566665655 889999998644
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
+.++.+.||...|+.+..+|-++.+++++.|++|++||++... |...+. ...-...+|+|+|-++|
T Consensus 91 ---kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~-----cqg~l~------~~~~pi~AfDp~GLifA 156 (311)
T KOG1446|consen 91 ---KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKK-----CQGLLN------LSGRPIAAFDPEGLIFA 156 (311)
T ss_pred ---ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCC-----CceEEe------cCCCcceeECCCCcEEE
Confidence 4678899999999999999999999999999999999887432 222221 11122468999999999
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccce
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
++...+.|++||++...- .+. ....+..........+.|+++| +++.....+.+++.+.-.+.+
T Consensus 157 ~~~~~~~IkLyD~Rs~dk---gPF----~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~-------- 221 (311)
T KOG1446|consen 157 LANGSELIKLYDLRSFDK---GPF----TTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTV-------- 221 (311)
T ss_pred EecCCCeEEEEEecccCC---CCc----eeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcE--------
Confidence 998888999999874311 000 0011111123345678889987 445555556666664432221
Q ss_pred eeecccccC--cc-eeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 310 LLKKEKAHD--MD-VNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 310 ~~~~~~~h~--~~-i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+....++. .. -....|+||++ ++.+|+.||+|.+|+++.+
T Consensus 222 -~~tfs~~~~~~~~~~~a~ftPds~-Fvl~gs~dg~i~vw~~~tg 264 (311)
T KOG1446|consen 222 -KSTFSGYPNAGNLPLSATFTPDSK-FVLSGSDDGTIHVWNLETG 264 (311)
T ss_pred -eeeEeeccCCCCcceeEEECCCCc-EEEEecCCCcEEEEEcCCC
Confidence 22222221 11 14678999986 6779999999999998764
No 118
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=3e-22 Score=169.91 Aligned_cols=310 Identities=13% Similarity=0.267 Sum_probs=211.0
Q ss_pred Cccceeeeeeec-C--CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEEC
Q 018675 7 GNYELREIQTLE-G--HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS 83 (352)
Q Consensus 7 ~~~~~~~~~~~~-g--H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 83 (352)
+.+.+..++.+. + -...|++|.|||. .+++++|+.|++++||.++..... ..... ..-.-+|.++.|.
T Consensus 196 ~tl~~krlkDaNa~~ps~~~I~sv~FHp~------~plllvaG~d~~lrifqvDGk~N~-~lqS~--~l~~fPi~~a~f~ 266 (514)
T KOG2055|consen 196 GTLNIKRLKDANAAHPSHGGITSVQFHPT------APLLLVAGLDGTLRIFQVDGKVNP-KLQSI--HLEKFPIQKAEFA 266 (514)
T ss_pred ceeeeEeecccccCCcCcCCceEEEecCC------CceEEEecCCCcEEEEEecCccCh-hheee--eeccCccceeeec
Confidence 334444444443 2 3468999999997 489999999999999988754321 11111 1234689999999
Q ss_pred CCCC-EEEEEeCCCcEEEEEccCCceeeeEeeccccC-CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec
Q 018675 84 PSGK-LLATASFDATTCIWEDVGGDYECVATLEGHEN-EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161 (352)
Q Consensus 84 ~~~~-~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 161 (352)
|+|. .+++++--.....||..+.+...+..+.++.. .+..+..++++++|+..|..|.|.+--..++. .+..++
T Consensus 267 p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~e---li~s~K- 342 (514)
T KOG2055|consen 267 PNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKE---LITSFK- 342 (514)
T ss_pred CCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhh---hhheee-
Confidence 9998 88888888899999998876666665666653 46678889999999999999999987654432 222222
Q ss_pred CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 162 h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
-...+..+.|+.+++.|++.+.+|.|.+|+++.. .+++.....-.-| -++++.++++.|||+|+..|.|.||
T Consensus 343 ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~-----~~~~rf~D~G~v~---gts~~~S~ng~ylA~GS~~GiVNIY 414 (514)
T KOG2055|consen 343 IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQN-----SCLHRFVDDGSVH---GTSLCISLNGSYLATGSDSGIVNIY 414 (514)
T ss_pred eccEEeeEEEecCCcEEEEEcCCceEEEEecCCc-----ceEEEEeecCccc---eeeeeecCCCceEEeccCcceEEEe
Confidence 2346888999999999999999999999988653 3444443222222 2467888999999999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCce-EEecCC--CCeEEEEEccCCccccCcccceeeecccccC
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAA--DDSVQFFVESKDDLIDGPSYKMLLKKEKAHD 318 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~--d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~ 318 (352)
|.+... .+. ..+++..+.. ....|.++.|+++.. ++.++. +..+++.......++.. +... .+..
T Consensus 415 d~~s~~-~s~----~PkPik~~dN-Ltt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsN--fP~~-n~~v--- 482 (514)
T KOG2055|consen 415 DGNSCF-AST----NPKPIKTVDN-LTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSN--FPTS-NTKV--- 482 (514)
T ss_pred ccchhh-ccC----CCCchhhhhh-hheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeecc--CCCC-CCcc---
Confidence 864221 111 1122222221 234578889998874 444433 45677654433333221 1111 1122
Q ss_pred cceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 319 MDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 319 ~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+.|++++|||.+. +||-|-++|.+.+|.+..
T Consensus 483 g~vtc~aFSP~sG-~lAvGNe~grv~l~kL~h 513 (514)
T KOG2055|consen 483 GHVTCMAFSPNSG-YLAVGNEAGRVHLFKLHH 513 (514)
T ss_pred cceEEEEecCCCc-eEEeecCCCceeeEeecc
Confidence 4599999999876 688999999999999853
No 119
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.92 E-value=9.2e-23 Score=172.84 Aligned_cols=316 Identities=18% Similarity=0.245 Sum_probs=208.9
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~ 90 (352)
.....++-|..+|++++|+|..+ .+++|.|..-|+|-+||+.+..+-.. ...+...|..+|.++.|+|.. ..+.
T Consensus 177 ~~~~v~kv~~~Rit~l~fHPt~~----~~lva~GdK~G~VG~Wn~~~~~~d~d-~v~~f~~hs~~Vs~l~F~P~n~s~i~ 251 (498)
T KOG4328|consen 177 RILNVAKVTDRRITSLAFHPTEN----RKLVAVGDKGGQVGLWNFGTQEKDKD-GVYLFTPHSGPVSGLKFSPANTSQIY 251 (498)
T ss_pred eecceeEecccceEEEEecccCc----ceEEEEccCCCcEEEEecCCCCCccC-ceEEeccCCccccceEecCCChhhee
Confidence 34456677999999999999864 47899999999999999964332111 112234588999999999954 6788
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+.+.||+|++-|..+...+.+..+..-......+.|+.+...++.+..=|...+||++..+. ....+.-|...|++++
T Consensus 252 ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s--~~~~~~lh~kKI~sv~ 329 (498)
T KOG4328|consen 252 SSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGS--EYENLRLHKKKITSVA 329 (498)
T ss_pred eeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCc--cchhhhhhhcccceee
Confidence 89999999999987765544444443334556777777666666776667889999976553 1233445777999999
Q ss_pred EcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc
Q 018675 171 WHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249 (352)
Q Consensus 171 ~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (352)
++|... +++++|.|++.+|||++.-....--.+. ...|...|.+..|||++..|++.+.|.+|+|||..- ..
T Consensus 330 ~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~ls-----t~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~--~s 402 (498)
T KOG4328|consen 330 LNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLS-----TLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSC--IS 402 (498)
T ss_pred cCCCCchheeecccCcceeeeehhhhcCCCCccee-----cccccceeeeeEEcCCCCceEeeccCCceEEeeccc--cc
Confidence 999654 6899999999999998764322110122 236899999999999988899999999999998631 00
Q ss_pred cCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEE-Eec
Q 018675 250 SGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV-QWS 327 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~-~~s 327 (352)
...............+.+ -+.+...|.|+. +++.|-.-..|-+++.+.+. ++.+....-...|.++ +|+
T Consensus 403 a~~~p~~~I~Hn~~t~Rw-lT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q--------~v~el~~P~~~tI~~vn~~H 473 (498)
T KOG4328|consen 403 AKDEPLGTIPHNNRTGRW-LTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ--------MVCELHDPESSTIPSVNEFH 473 (498)
T ss_pred ccCCccceeeccCccccc-ccchhheeCCCccEEEEeccCcceeEEcCCCCE--------EeeeccCccccccccceeec
Confidence 000000001111111111 134556788865 66677666777777554332 1111122223345554 689
Q ss_pred CCCcceEEEecCCCeEEEEeecc
Q 018675 328 PGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 328 p~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|-+..+++-++..|.|.||.-..
T Consensus 474 P~~~~~~aG~~s~Gki~vft~k~ 496 (498)
T KOG4328|consen 474 PMRDTLAAGGNSSGKIYVFTNKK 496 (498)
T ss_pred ccccceeccCCccceEEEEecCC
Confidence 97654666666778888886543
No 120
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.92 E-value=1.1e-22 Score=178.90 Aligned_cols=302 Identities=20% Similarity=0.296 Sum_probs=198.3
Q ss_pred EEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeee--ecceecceEEEEECCCCCEEEEEeCCCcEEEEEcc
Q 018675 27 LAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL--EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV 104 (352)
Q Consensus 27 i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 104 (352)
..|++..+ ....||-+-.||.|.++|.....-. ..+..+ -..|...|..+.|-|....|++++.|.++++||..
T Consensus 55 ~sFs~~~n---~eHiLavadE~G~i~l~dt~~~~fr-~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk 130 (720)
T KOG0321|consen 55 DSFSAAPN---KEHILAVADEDGGIILFDTKSIVFR-LEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVK 130 (720)
T ss_pred ccccCCCC---ccceEEEecCCCceeeecchhhhcc-hhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeec
Confidence 55655432 2467899999999999987543211 011111 13588999999999955679999999999999998
Q ss_pred CCceeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCC--------------------ee----EEEEEe
Q 018675 105 GGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGN--------------------EF----ECVSVL 159 (352)
Q Consensus 105 ~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~--------------------~~----~~~~~~ 159 (352)
+++..-.....+|.+.|.+++|.|. ...|++|+.||.+.|||++-.. .. +.+...
T Consensus 131 ~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~ 210 (720)
T KOG0321|consen 131 TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKW 210 (720)
T ss_pred cceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccc
Confidence 7765444447899999999999985 4579999999999999985221 00 011122
Q ss_pred ecCccCeeE---EEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeee-ccCCCC---cccEEEEEEcCCCCEEEE
Q 018675 160 QGHAQDVKM---VQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTIS-ESNNGH---SSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 160 ~~h~~~v~~---~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~-~~~~~h---~~~i~~l~~~~~~~~l~s 231 (352)
.++...|.+ +-+..|+..|++++. |+.|++||++..... +. ..... ....-| .-.+.+|.....|.+|.+
T Consensus 211 kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~-~r-~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~A 288 (720)
T KOG0321|consen 211 KAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTA-YR-QEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFA 288 (720)
T ss_pred ccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccc-cc-cCCCcccCccCcccceeeeEEEEecCCCCeEEE
Confidence 234434444 455578888999888 999999998753211 00 00000 000011 235667888888999888
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceE-EEEecC-CceEEecCCCCeEEEEEccCCccccCcccce
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIF-SVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~-~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
.+.|+.|.+|++...... +...+.+.....++ .-..++ +.++++|+.|...++|..+.-. .
T Consensus 289 sCtD~sIy~ynm~s~s~s---------P~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e--------~ 351 (720)
T KOG0321|consen 289 SCTDNSIYFYNMRSLSIS---------PVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPE--------A 351 (720)
T ss_pred EecCCcEEEEeccccCcC---------chhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCcc--------C
Confidence 888999999987532211 01111111111111 112234 4589999999999999654311 1
Q ss_pred eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
....+.+|...|++++|.|....-++|+++|-+++||++.+.
T Consensus 352 ~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 352 PPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred ChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 122357999999999998765444789999999999999664
No 121
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.91 E-value=7.7e-23 Score=163.93 Aligned_cols=286 Identities=23% Similarity=0.417 Sum_probs=191.8
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCC-------CeEEEEecCCCcee-----eeeeeeeecceecceEEEEE
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGD-------KTVRIWEQSASSRF-----WNCKAVLEEMHTRTVRSCAW 82 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D-------~~v~~w~~~~~~~~-----~~~~~~~~~~h~~~v~~~~~ 82 (352)
+.|..|.+.|+.++-+|.+ ...|+|+-+| ....||.+..+... +.+...+...+-+.|.|+.|
T Consensus 57 kvf~h~agEvw~las~P~d-----~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew 131 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFD-----QRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEW 131 (370)
T ss_pred hhhhcCCcceehhhcCCCC-----CceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEE
Confidence 4567899999999999976 4678888654 34778987654321 11112222234468999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCceeeeEee-----ccccCCeeEEEECC--CCcEEEEeeCCCcEEEEecCCCCeeEE
Q 018675 83 SPSGKLLATASFDATTCIWEDVGGDYECVATL-----EGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPGNEFEC 155 (352)
Q Consensus 83 s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~-----~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~ 155 (352)
.|++..+++.. |+.|.+|+...+... ++.+ .++....++-+|+| +++.+++.+ |+++..||++.....
T Consensus 132 ~Pns~klasm~-dn~i~l~~l~ess~~-vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~-- 206 (370)
T KOG1007|consen 132 EPNSDKLASMD-DNNIVLWSLDESSKI-VAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKN-- 206 (370)
T ss_pred cCCCCeeEEec-cCceEEEEcccCcch-heeecccccccccceecccccCCCCccceEEEeC-CCcEEEEEccchhhh--
Confidence 99999988765 899999998665431 2222 23455677888998 677877654 689999999865432
Q ss_pred EEEeecCccCeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEe
Q 018675 156 VSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCS 233 (352)
Q Consensus 156 ~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~ 233 (352)
...-.+|...+..++|.|+.+ +|++++.|+.|+|||.+.+.. .+ ....+|..+|+++.|+|. .+++++||
T Consensus 207 ~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~----pv----~el~~HsHWvW~VRfn~~hdqLiLs~~ 278 (370)
T KOG1007|consen 207 NSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKF----PV----QELPGHSHWVWAVRFNPEHDQLILSGG 278 (370)
T ss_pred cchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCc----cc----cccCCCceEEEEEEecCccceEEEecC
Confidence 233457888899999999865 688999999999998766431 12 234589999999999996 45677999
Q ss_pred CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeec
Q 018675 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313 (352)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
.|..|.+|-.... .++ . .+.+..+. +-..+.. . .....+.....+++
T Consensus 279 SDs~V~Lsca~sv--SSE-----------------~---qi~~~~de---se~e~~d------s--eer~kpL~dg~l~t 325 (370)
T KOG1007|consen 279 SDSAVNLSCASSV--SSE-----------------Q---QIEFEDDE---SESEDED------S--EERVKPLQDGQLET 325 (370)
T ss_pred CCceeEEEecccc--ccc-----------------c---cccccccc---ccCcchh------h--HHhccccccccccc
Confidence 9999999943210 000 0 00000000 0000000 0 00001122233456
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+..|...|++++||..++++|||-++||.+.|=.+.+.
T Consensus 326 ydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r~ 363 (370)
T KOG1007|consen 326 YDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPRF 363 (370)
T ss_pred ccccccceEEEeeccCCCeeEEEeccCceEEeecCChh
Confidence 67899999999999999999999999999998777553
No 122
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.91 E-value=1.2e-23 Score=174.22 Aligned_cols=224 Identities=25% Similarity=0.460 Sum_probs=168.2
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CE
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KL 88 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~ 88 (352)
..+++.++.||.+.-++++|+|.. ...|+||---+.+++|...++. |+....-...|+.+|-.++|||.. ..
T Consensus 200 ~~~Pl~t~~ghk~EGy~LdWSp~~-----~g~LlsGDc~~~I~lw~~~~g~--W~vd~~Pf~gH~~SVEDLqWSptE~~v 272 (440)
T KOG0302|consen 200 EFRPLFTFNGHKGEGYGLDWSPIK-----TGRLLSGDCVKGIHLWEPSTGS--WKVDQRPFTGHTKSVEDLQWSPTEDGV 272 (440)
T ss_pred ccCceEEecccCccceeeeccccc-----ccccccCccccceEeeeeccCc--eeecCccccccccchhhhccCCccCce
Confidence 357889999999999999999953 2357777666889999887643 444332224499999999999965 68
Q ss_pred EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
+++|+.|++|+|||.+.++...-...+.|.+.|+.|+|+..-.+|++|++||+++|||++.-+..+++..++-|..+|++
T Consensus 273 faScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pIts 352 (440)
T KOG0302|consen 273 FASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITS 352 (440)
T ss_pred EEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeE
Confidence 99999999999999987744433344899999999999988779999999999999999877766788899999999999
Q ss_pred EEEcCCC-CEEEEEeCCCcEEEEecCCCCC------CCceeEeeee-ccCCCC--cccEEEEEEcCC-CCEEEEEeCCCc
Q 018675 169 VQWHPTM-DVLFSCSYDNTIKVWWAEDTDS------DNWHCVQTIS-ESNNGH--SSTIWALSFNAK-GDKLVSCSDDLT 237 (352)
Q Consensus 169 ~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~------~~~~~~~~~~-~~~~~h--~~~i~~l~~~~~-~~~l~s~~~dg~ 237 (352)
+.|+|.. ..+++++.|..|.+||+.-... .....++.+. +.+.-| +..+..|.|++. -.++++.+.||
T Consensus 353 ieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG- 431 (440)
T KOG0302|consen 353 IEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG- 431 (440)
T ss_pred EEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-
Confidence 9999965 4678889999999998743211 0000111111 001123 356778899986 34677777777
Q ss_pred EEEE
Q 018675 238 IKIW 241 (352)
Q Consensus 238 i~iw 241 (352)
+.||
T Consensus 432 fnVf 435 (440)
T KOG0302|consen 432 FNVF 435 (440)
T ss_pred eeEE
Confidence 4444
No 123
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.91 E-value=7.4e-21 Score=163.23 Aligned_cols=283 Identities=19% Similarity=0.377 Sum_probs=207.1
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
.-.+.|....|+|.+ ..+++|++ -+.+.+|++..+. +.+...++++..++.|.|++|.++|+ +++|..+|.|
T Consensus 198 ~sne~v~~a~FHPtd-----~nliit~G-k~H~~Fw~~~~~~-l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i 269 (626)
T KOG2106|consen 198 TSNEVVFLATFHPTD-----PNLIITCG-KGHLYFWTLRGGS-LVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNI 269 (626)
T ss_pred eccceEEEEEeccCC-----CcEEEEeC-CceEEEEEccCCc-eEEEeeccccccceEEEEEEEcCCCC-EEeecCCceE
Confidence 345678889999986 46777775 6899999987654 23334445444457899999999988 4689999999
Q ss_pred EEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE------------------------
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE------------------------ 154 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~------------------------ 154 (352)
.||+..+... ......|++.|.+++.-.+|.+| +|+.|+.|..||-. .+...
T Consensus 270 ~Iw~~~~~~~--~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~-y~k~r~~elPe~~G~iRtv~e~~~di~vG 345 (626)
T KOG2106|consen 270 LIWSKGTNRI--SKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWDDN-YRKLRETELPEQFGPIRTVAEGKGDILVG 345 (626)
T ss_pred EEEeCCCceE--EeEeeecCCceEEEEEecCccEe-ecCccceEEecccc-ccccccccCchhcCCeeEEecCCCcEEEe
Confidence 9998755433 23333899999999998888765 59999999999831 10000
Q ss_pred -----E---------EEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEE
Q 018675 155 -----C---------VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220 (352)
Q Consensus 155 -----~---------~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l 220 (352)
. -....+|..+.+.++.+|+.+.+++++.|+.+++|+ + ....|.. ....++.++
T Consensus 346 TtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~-~k~~wt~---------~~~d~~~~~ 413 (626)
T KOG2106|consen 346 TTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--D-HKLEWTK---------IIEDPAECA 413 (626)
T ss_pred eccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--C-CceeEEE---------EecCceeEe
Confidence 0 012346888888999999999999999999999996 1 1111211 124678899
Q ss_pred EEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCC
Q 018675 221 SFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKD 299 (352)
Q Consensus 221 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~ 299 (352)
.|+|.| .+|.|...|...+.|.+...+. .+.. ...++..+.++|+| ++|.|+.|+.+++|-.+..
T Consensus 414 ~fhpsg-~va~Gt~~G~w~V~d~e~~~lv------------~~~~-d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~ 479 (626)
T KOG2106|consen 414 DFHPSG-VVAVGTATGRWFVLDTETQDLV------------TIHT-DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSAN 479 (626)
T ss_pred eccCcc-eEEEeeccceEEEEecccceeE------------EEEe-cCCceEEEEEcCCCCEEEEecCCCeEEEEEECCC
Confidence 999999 8999999999999988643321 1111 24568889999987 8999999999999966543
Q ss_pred ccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 300 DLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 300 ~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
.. ........|..+|+.+.||+|++ +|.+-+.|-.|..|.
T Consensus 480 g~-------~y~r~~k~~gs~ithLDwS~Ds~-~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 480 GR-------KYSRVGKCSGSPITHLDWSSDSQ-FLVSNSGDYEILYWK 519 (626)
T ss_pred Cc-------EEEEeeeecCceeEEeeecCCCc-eEEeccCceEEEEEc
Confidence 21 11111223448999999999985 688999999999994
No 124
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=2.5e-24 Score=191.52 Aligned_cols=240 Identities=21% Similarity=0.353 Sum_probs=191.7
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+.....+..|...|.|+..... ...+++|+.|..+.||.......+.. ...|..+|.++.|+++..+|+
T Consensus 18 ~~~~~~~~~hsaav~~lk~~~s------~r~~~~Gg~~~k~~L~~i~kp~~i~S-----~~~hespIeSl~f~~~E~Lla 86 (825)
T KOG0267|consen 18 VWDTREFVAHSAAVGCLKIRKS------SRSLVTGGEDEKVNLWAIGKPNAITS-----LTGHESPIESLTFDTSERLLA 86 (825)
T ss_pred cccchhhhhhhhhhceeeeecc------ceeeccCCCceeeccccccCCchhhe-----eeccCCcceeeecCcchhhhc
Confidence 3444567789999999876433 46899999999999998865533221 256999999999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+|+.+|+|++||.+... .+.++.||...+.++.|+|-+.++++++.|..+++||++. ..|.+.+.+|...+.++.
T Consensus 87 agsasgtiK~wDleeAk--~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk---~Gc~~~~~s~~~vv~~l~ 161 (825)
T KOG0267|consen 87 AGSASGTIKVWDLEEAK--IVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRK---KGCSHTYKSHTRVVDVLR 161 (825)
T ss_pred ccccCCceeeeehhhhh--hhhhhhccccCcceeeeccceEEeccccccccceehhhhc---cCceeeecCCcceeEEEe
Confidence 99999999999998653 3568889999999999999999999999999999999863 347788889999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
|+|+|.+++++++|..++|||.... .+......|+..+.++.|+|..-++++|+.|+++++||++...+..
T Consensus 162 lsP~Gr~v~~g~ed~tvki~d~~ag---------k~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~ 232 (825)
T KOG0267|consen 162 LSPDGRWVASGGEDNTVKIWDLTAG---------KLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVIS 232 (825)
T ss_pred ecCCCceeeccCCcceeeeeccccc---------ccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEee
Confidence 9999999999999999999976442 2223345799999999999999999999999999999987443322
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCceEEecCC
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAA 287 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~ 287 (352)
..+ .....+.+..|.+.+..+..+.
T Consensus 233 s~~------------~~~~~v~~~~fn~~~~~~~~G~ 257 (825)
T KOG0267|consen 233 SGK------------PETDGVRSLAFNPDGKIVLSGE 257 (825)
T ss_pred ccC------------CccCCceeeeecCCceeeecCc
Confidence 111 1133467777887775444433
No 125
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.91 E-value=3.4e-23 Score=170.67 Aligned_cols=253 Identities=19% Similarity=0.342 Sum_probs=182.2
Q ss_pred ccCCcccee------eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecce
Q 018675 4 LDDGNYELR------EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77 (352)
Q Consensus 4 ~~~~~~~~~------~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v 77 (352)
.-||.+++. ++.+++.|.+.|.+|++.-. .++|+|+|++|+.|.++.+- ...+ .-...+
T Consensus 86 s~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~--------~~~tvgdDKtvK~wk~~~~p-----~~ti--lg~s~~ 150 (433)
T KOG0268|consen 86 SCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQT--------SFFTVGDDKTVKQWKIDGPP-----LHTI--LGKSVY 150 (433)
T ss_pred ccCceEEEEehhhhhhhheeecccCceeeEEeccc--------ceEEecCCcceeeeeccCCc-----ceee--eccccc
Confidence 456666653 34578999999999998753 58999999999999876531 1111 112345
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEE
Q 018675 78 RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~ 156 (352)
..+.-+..+..++|+|. .|.|||..... ++..+.--...|.++.|+|.- ..|++|+.|++|.++|++.+.+.+.+
T Consensus 151 ~gIdh~~~~~~FaTcGe--~i~IWD~~R~~--Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KV 226 (433)
T KOG0268|consen 151 LGIDHHRKNSVFATCGE--QIDIWDEQRDN--PVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKV 226 (433)
T ss_pred cccccccccccccccCc--eeeecccccCC--ccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCcccee
Confidence 56665656677888875 48899976543 344444345679999999954 46888889999999999877655433
Q ss_pred EEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
..- -.-+.++|+|..-.+++|++|..+..||++.- .+......+|.+.|.+++|+|.|+.+++||-|.
T Consensus 227 i~~----mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l--------~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDk 294 (433)
T KOG0268|consen 227 ILT----MRTNTICWNPEAFNFVAANEDHNLYTYDMRNL--------SRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDK 294 (433)
T ss_pred eee----ccccceecCccccceeeccccccceehhhhhh--------cccchhhcccceeEEEeccCCCcchhccccccc
Confidence 221 13457889997777899999999999976542 222334568999999999999999999999999
Q ss_pred cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 237 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
+|+||..+-.. +. ......-.+.++++.|+-+. ++++|+.|+.+++|....
T Consensus 295 sIRIf~~~~~~--SR---------diYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 295 SIRIFPVNHGH--SR---------DIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred eEEEeecCCCc--ch---------hhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 99999765211 00 00011124568889988764 899999999999996543
No 126
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=4.2e-23 Score=185.02 Aligned_cols=248 Identities=15% Similarity=0.325 Sum_probs=176.6
Q ss_pred EEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeeccee--cceEEEEECC-CCCEEEEEeCCCcEEEE
Q 018675 25 WSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT--RTVRSCAWSP-SGKLLATASFDATTCIW 101 (352)
Q Consensus 25 ~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~-~~~~l~s~~~d~~i~i~ 101 (352)
++|..+++. ..++.++ --.++||.........++....+...+ ..+..+.|.. +.++|||++..|.|.+|
T Consensus 43 nAIs~nr~~------~qiv~AG-rs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vW 115 (839)
T KOG0269|consen 43 NAISVNRDI------NQIVVAG-RSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVW 115 (839)
T ss_pred ceEeecCCc------ceeEEec-ccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEE
Confidence 345555653 3455554 347888876654322222211111111 2445677764 46899999999999999
Q ss_pred EccC-CceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC-CCEE
Q 018675 102 EDVG-GDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MDVL 178 (352)
Q Consensus 102 ~~~~-~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l 178 (352)
|... .....+..+..|...|+++.|++ ..++|++||.||+|++||++.... ..++.+....|+.+.|+|. +..+
T Consensus 116 dlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S---~~t~~~nSESiRDV~fsp~~~~~F 192 (839)
T KOG0269|consen 116 DLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS---KSTFRSNSESIRDVKFSPGYGNKF 192 (839)
T ss_pred ecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccc---cccccccchhhhceeeccCCCceE
Confidence 9753 22344567789999999999987 567899999999999999976543 4556677889999999995 5678
Q ss_pred EEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccce
Q 018675 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258 (352)
Q Consensus 179 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (352)
+++...|.+++||++..+. ......+|.++|.++.|+|++.+|||||.|++|+||+....+..
T Consensus 193 ~s~~dsG~lqlWDlRqp~r--------~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~--------- 255 (839)
T KOG0269|consen 193 ASIHDSGYLQLWDLRQPDR--------CEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAK--------- 255 (839)
T ss_pred EEecCCceEEEeeccCchh--------HHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcc---------
Confidence 8999999999999876532 12234589999999999999999999999999999986321100
Q ss_pred eeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEec
Q 018675 259 HLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 338 (352)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~ 338 (352)
... .+. -..+|.++.|=|+.+..|||++
T Consensus 256 ~~~------------------------------------------------tIn----Tiapv~rVkWRP~~~~hLAtcs 283 (839)
T KOG0269|consen 256 PKH------------------------------------------------TIN----TIAPVGRVKWRPARSYHLATCS 283 (839)
T ss_pred cee------------------------------------------------EEe----ecceeeeeeeccCccchhhhhh
Confidence 000 001 1246888889888877788776
Q ss_pred C--CCeEEEEeeccC
Q 018675 339 D--DGMIKIWELANT 351 (352)
Q Consensus 339 ~--Dg~i~iw~~~~~ 351 (352)
. |-.|+|||++++
T Consensus 284 mv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 284 MVVDTSVHVWDVRRP 298 (839)
T ss_pred ccccceEEEEeeccc
Confidence 4 677999999876
No 127
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=5.2e-22 Score=168.68 Aligned_cols=246 Identities=18% Similarity=0.254 Sum_probs=179.9
Q ss_pred EEEEee-CCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC
Q 018675 41 VFASCS-GDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN 119 (352)
Q Consensus 41 ~l~s~s-~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~ 119 (352)
+++++. .-..+.+|.+......- .+..-.++|.+++-+|+|.+|+.|+..+.+.+|...+|. .+..+.+|=.
T Consensus 52 yllsaq~~rp~l~vw~i~k~~~~~-----q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~--LL~v~~aHYQ 124 (476)
T KOG0646|consen 52 YLLSAQLKRPLLHVWEILKKDQVV-----QYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGI--LLNVLSAHYQ 124 (476)
T ss_pred heeeecccCccccccccCchhhhh-----hhcccccceeeeecCCCceEEEeecccCcEEEEEecccc--HHHHHHhhcc
Confidence 455543 33467778765432211 122346789999999999999999899999999998884 4566789999
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecC------CCCeeEEEEEeecCccCeeEEEEcCC--CCEEEEEeCCCcEEEEe
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVM------PGNEFECVSVLQGHAQDVKMVQWHPT--MDVLFSCSYDNTIKVWW 191 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~------~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~iw~ 191 (352)
.|+|+.|+.|+.+|+|||.||.|.+|.+. +....++++.+..|.-+|+.+...+. ...++++|.|+++++|+
T Consensus 125 ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wd 204 (476)
T KOG0646|consen 125 SITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWD 204 (476)
T ss_pred ceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEE
Confidence 99999999999999999999999999862 12244567889999999999987654 46899999999999998
Q ss_pred cCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcce
Q 018675 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271 (352)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 271 (352)
+... ..+.++ .....+.++..+|.++.+..|+.+|.|-+..+....-++
T Consensus 205 lS~g-----~LLlti-----~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~--------------------- 253 (476)
T KOG0646|consen 205 LSLG-----VLLLTI-----TFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQS--------------------- 253 (476)
T ss_pred eccc-----eeeEEE-----ecCCcceeEEEcccccEEEecCCcceEEeeehhcCCccc---------------------
Confidence 7553 122233 235689999999999999999999998887653110000
Q ss_pred EEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCc--ceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 272 FSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM--DVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 272 ~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.+. ..+.+... ...+....||.+ +|+|++.+-|+. +|+||++||.+.|||+.
T Consensus 254 -------~~v--------~~k~~~~~----------~t~~~~~~Gh~~~~~ITcLais~Dgt-lLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 254 -------AGV--------NQKGRHEE----------NTQINVLVGHENESAITCLAISTDGT-LLLSGDEDGKVCVWDIY 307 (476)
T ss_pred -------ccc--------cccccccc----------cceeeeeccccCCcceeEEEEecCcc-EEEeeCCCCCEEEEecc
Confidence 000 00000000 011223467877 999999999986 78999999999999985
Q ss_pred c
Q 018675 350 N 350 (352)
Q Consensus 350 ~ 350 (352)
.
T Consensus 308 S 308 (476)
T KOG0646|consen 308 S 308 (476)
T ss_pred h
Confidence 4
No 128
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.90 E-value=9.9e-22 Score=168.51 Aligned_cols=268 Identities=22% Similarity=0.351 Sum_probs=181.9
Q ss_pred CCccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC
Q 018675 6 DGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS 85 (352)
Q Consensus 6 ~~~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 85 (352)
.|++.-.-..+..||.+..+.++.+|++ ++++||+.|+++++|+ ..+..|.. .-..++.|++|+|.
T Consensus 353 ~Gt~~~~f~~~v~gh~delwgla~hps~------~q~~T~gqdk~v~lW~--~~k~~wt~------~~~d~~~~~~fhps 418 (626)
T KOG2106|consen 353 QGTLENGFTLTVQGHGDELWGLATHPSK------NQLLTCGQDKHVRLWN--DHKLEWTK------IIEDPAECADFHPS 418 (626)
T ss_pred EeeecCCceEEEEecccceeeEEcCCCh------hheeeccCcceEEEcc--CCceeEEE------EecCceeEeeccCc
Confidence 3444433444567999999999999985 6899999999999999 33333432 23468899999999
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC-CeeEEEEEeecCcc
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG-NEFECVSVLQGHAQ 164 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~h~~ 164 (352)
| .+|.|...|...+.|.++... +..-.. ++++++++|+|+|.+||.|+.|+.|.+|.+... ..+..+....+ +
T Consensus 419 g-~va~Gt~~G~w~V~d~e~~~l--v~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~g--s 492 (626)
T KOG2106|consen 419 G-VVAVGTATGRWFVLDTETQDL--VTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSG--S 492 (626)
T ss_pred c-eEEEeeccceEEEEeccccee--EEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecC--c
Confidence 9 999999999988888776432 222223 789999999999999999999999999998644 33444444444 7
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC---CCEEEEEeCCCcEEEE
Q 018675 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK---GDKLVSCSDDLTIKIW 241 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~---~~~l~s~~~dg~i~iw 241 (352)
+|+.++|++|++++.+-+.|-.|.+|....-.. ..++..+.|-.. -.+.+.|+.||+..
T Consensus 493 ~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~----------------~ts~kDvkW~t~~c~lGF~v~g~s~~t~i-- 554 (626)
T KOG2106|consen 493 PITHLDWSSDSQFLVSNSGDYEILYWKPSECKQ----------------ITSVKDVKWATYTCTLGFEVFGGSDGTDI-- 554 (626)
T ss_pred eeEEeeecCCCceEEeccCceEEEEEccccCcc----------------cceecceeeeeeEEEEEEEEecccCCchH--
Confidence 899999999999999999999999993221110 011333333211 01223333333210
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEec-CCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcc
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 320 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 320 (352)
..++-+ ...++++|...|++++|.+.=. ..+....+..+|+..
T Consensus 555 ------------------------------~a~~rs~~~~~lA~gdd~g~v~lf~yPc~------s~rA~~he~~ghs~~ 598 (626)
T KOG2106|consen 555 ------------------------------NAVARSHCEKLLASGDDFGKVHLFSYPCS------SPRAPSHEYGGHSSH 598 (626)
T ss_pred ------------------------------HHhhhhhhhhhhhccccCceEEEEccccC------CCcccceeeccccce
Confidence 000001 1235666666677777643210 112223456799999
Q ss_pred eeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 321 VNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 321 i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
|++++|+-+.. +|+|.+.|..|..|++
T Consensus 599 vt~V~Fl~~d~-~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 599 VTNVAFLCKDS-HLISTGKDTSIMQWRL 625 (626)
T ss_pred eEEEEEeeCCc-eEEecCCCceEEEEEe
Confidence 99999998765 5667779999999986
No 129
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=1.8e-21 Score=177.76 Aligned_cols=253 Identities=19% Similarity=0.335 Sum_probs=186.6
Q ss_pred ecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC
Q 018675 70 EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 70 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~ 149 (352)
+.+|+...+.++|.|+|..|.+++.|+.|++|+.......+ ..+.-+...|.+++- .+++|++|+.+++|.++.+..
T Consensus 9 Ryaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P-~ti~~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fps 85 (933)
T KOG1274|consen 9 RYAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEP-ETIDISGELVSSIAC--YSNHFLTGSEQNTVLRYKFPS 85 (933)
T ss_pred hhhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCC-chhhccCceeEEEee--cccceEEeeccceEEEeeCCC
Confidence 35688889999999999999999999999999865431111 122225667777764 445899999999999999876
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
+.....+.. .+.++++++++-++.+++.||.|-.|++-+..+.... ....+|..+|.+|.|+|++.+|
T Consensus 86 ~~~~~iL~R---ftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~---------~~lrgh~apVl~l~~~p~~~fL 153 (933)
T KOG1274|consen 86 GEEDTILAR---FTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE---------KVLRGHDAPVLQLSYDPKGNFL 153 (933)
T ss_pred CCccceeee---eeccceEEEEecCCcEEEeecCceeEEEEeccccchh---------eeecccCCceeeeeEcCCCCEE
Confidence 655434433 3568899999999999999999999999977654321 1234799999999999999999
Q ss_pred EEEeCCCcEEEEcCCccccccCCCCccceeeEEeeccc-CcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCccc
Q 018675 230 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH-DRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
|+.+-||.|++|++...... ..+.....-.... ...+..++|+|+ +.++..+.|+.|.+|........
T Consensus 154 Avss~dG~v~iw~~~~~~~~-----~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~----- 223 (933)
T KOG1274|consen 154 AVSSCDGKVQIWDLQDGILS-----KTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQ----- 223 (933)
T ss_pred EEEecCceEEEEEcccchhh-----hhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeh-----
Confidence 99999999999998633221 0111111111111 345667899997 68999999999999966543221
Q ss_pred ceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 308 KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 308 ~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
......-|...+..+.|+|.|+ +||+++.||.|.||++++
T Consensus 224 --f~Lr~~~~ss~~~~~~wsPnG~-YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 224 --FKLRDKLSSSKFSDLQWSPNGK-YIAASTLDGQILVWNVDT 263 (933)
T ss_pred --eeecccccccceEEEEEcCCCc-EEeeeccCCcEEEEeccc
Confidence 1112234455599999999986 689999999999999973
No 130
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.90 E-value=8e-22 Score=163.45 Aligned_cols=265 Identities=21% Similarity=0.377 Sum_probs=183.4
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee------------eeeeeeeecceecceEEEEECC
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF------------WNCKAVLEEMHTRTVRSCAWSP 84 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~------------~~~~~~~~~~h~~~v~~~~~s~ 84 (352)
..+|.+.++-+...|.. ...+.|+=+..|.|.||++...... ..+.. ....|...=+.+.|||
T Consensus 147 ~i~h~g~~NRvr~~~~~----~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~-t~~ghk~EGy~LdWSp 221 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLG----NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLF-TFNGHKGEGYGLDWSP 221 (440)
T ss_pred ccccccccceeeecccC----CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceE-EecccCccceeeeccc
Confidence 34688888777766642 2357777788999999997532110 00111 1134666668999999
Q ss_pred CC-CEEEEEeCCCcEEEEEccCCceeeeE-eeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeec
Q 018675 85 SG-KLLATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161 (352)
Q Consensus 85 ~~-~~l~s~~~d~~i~i~~~~~~~~~~~~-~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 161 (352)
-. ..|++|..-+.|++|...++.+..-. -+.+|+..|..+.|+|. ...|++||-|++|+|||++.++...++.. ++
T Consensus 222 ~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kA 300 (440)
T KOG0302|consen 222 IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KA 300 (440)
T ss_pred ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-ec
Confidence 43 34788888899999988777654321 24579999999999995 45899999999999999998765555544 88
Q ss_pred CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEE
Q 018675 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKI 240 (352)
Q Consensus 162 h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~i 240 (352)
|...|+.+.|+....+|++|+.||+++|||++.-... ..+.+ ..-|..+|++|.|+|. ...|+++|.|..|.+
T Consensus 301 h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~--~pVA~----fk~Hk~pItsieW~p~e~s~iaasg~D~Qiti 374 (440)
T KOG0302|consen 301 HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG--QPVAT----FKYHKAPITSIEWHPHEDSVIAASGEDNQITI 374 (440)
T ss_pred cCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC--Cccee----EEeccCCeeEEEeccccCceEEeccCCCcEEE
Confidence 9999999999998889999999999999998764432 11222 2358999999999996 456788899999999
Q ss_pred EcCCccccc------cCCCCccceeeEEeecccCcceEEEEecCC--ceEEecCCCCeEEE
Q 018675 241 WGADITRMQ------SGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQF 293 (352)
Q Consensus 241 wd~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~s~~~d~~v~~ 293 (352)
||+.+.... ...++....+---|..--...+.-++|.++ +++++-+.||.-.+
T Consensus 375 WDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVf 435 (440)
T KOG0302|consen 375 WDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVF 435 (440)
T ss_pred EEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEE
Confidence 998653321 111111111111111101234556778774 68888888875443
No 131
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.90 E-value=2.6e-22 Score=161.45 Aligned_cols=222 Identities=17% Similarity=0.326 Sum_probs=156.8
Q ss_pred eecceecceEEEEECC-CCCEEEEEeCCCcEEEEEccCCc------e----ee---eEeeccccCCeeEEEECC-CCcEE
Q 018675 69 LEEMHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGD------Y----EC---VATLEGHENEVKSVSWNA-SGTLL 133 (352)
Q Consensus 69 ~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~i~~~~~~~------~----~~---~~~~~~h~~~v~~v~~~~-~~~~l 133 (352)
++..|.+.|+++...+ .|+++++|+.||.|.+||.++.. . .+ ...-.+|.-.|..+.|.| |.-.|
T Consensus 38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmF 117 (397)
T KOG4283|consen 38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMF 117 (397)
T ss_pred eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCcee
Confidence 3456889999999987 68999999999999999976532 1 11 112346778899999999 55588
Q ss_pred EEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC---CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccC
Q 018675 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP---TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN 210 (352)
Q Consensus 134 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 210 (352)
.+++-|.+++|||...-+ ....++ -...|-+-+++| ...++++|..|-.|++.|+.... +.+++
T Consensus 118 tssSFDhtlKVWDtnTlQ---~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs-----~sH~L---- 184 (397)
T KOG4283|consen 118 TSSSFDHTLKVWDTNTLQ---EAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGS-----FSHTL---- 184 (397)
T ss_pred ecccccceEEEeecccce---eeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCc-----ceeee----
Confidence 999999999999975432 222221 123344445665 24467778888899999876532 23334
Q ss_pred CCCcccEEEEEEcCCCCE-EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCC
Q 018675 211 NGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289 (352)
Q Consensus 211 ~~h~~~i~~l~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~ 289 (352)
.||...|.++.|+|..++ |++|+.||.||+||++.. ......+..+
T Consensus 185 sGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra---------------------sgcf~~lD~h------------ 231 (397)
T KOG4283|consen 185 SGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA---------------------SGCFRVLDQH------------ 231 (397)
T ss_pred ccccCceEEEEeccCceeEEEecCCCceEEEEEeecc---------------------cceeEEeecc------------
Confidence 489999999999998776 668999999999997521 0001111100
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
++ ....+.+....|.+.++.++|+.++++ +++++.|..+++|+..++
T Consensus 232 -------------n~-k~~p~~~~n~ah~gkvngla~tSd~~~-l~~~gtd~r~r~wn~~~G 278 (397)
T KOG4283|consen 232 -------------NT-KRPPILKTNTAHYGKVNGLAWTSDARY-LASCGTDDRIRVWNMESG 278 (397)
T ss_pred -------------cC-ccCccccccccccceeeeeeecccchh-hhhccCccceEEeecccC
Confidence 00 011223345689999999999999975 779999999999998764
No 132
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=3e-21 Score=156.22 Aligned_cols=247 Identities=19% Similarity=0.305 Sum_probs=170.4
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCee
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 153 (352)
...|.++.|+|.+..|+.+++||++++|+..... ....+ .|..++.+++|.+. ..+++|+-|+.|+.+|+..++.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~--l~~~~-~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~- 87 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANS--LKLKF-KHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNE- 87 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchh--hhhhe-ecCCceeeeeccCC-ceEEEeccCceEEEEEecCCcc-
Confidence 4679999999999999999999999999976553 22333 48899999999874 5788999999999999976543
Q ss_pred EEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe
Q 018675 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
..+..|...+.|+.+.+....+++||+|++|++||.+... ...++ .....|.+++.. ++.|+.|+
T Consensus 88 ---~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~-----~~~~~-----d~~kkVy~~~v~--g~~LvVg~ 152 (323)
T KOG1036|consen 88 ---DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKV-----VVGTF-----DQGKKVYCMDVS--GNRLVVGT 152 (323)
T ss_pred ---eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccc-----ccccc-----ccCceEEEEecc--CCEEEEee
Confidence 3456799999999999988899999999999999876421 11111 123478888765 66799999
Q ss_pred CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCccc----c
Q 018675 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSY----K 308 (352)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~----~ 308 (352)
.|..+.+||++....... +... ...-.+.+++.-|+ .-+++++-+|-+.+=.....+....... +
T Consensus 153 ~~r~v~iyDLRn~~~~~q------~reS----~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCH 222 (323)
T KOG1036|consen 153 SDRKVLIYDLRNLDEPFQ------RRES----SLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCH 222 (323)
T ss_pred cCceEEEEEcccccchhh------hccc----cceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEee
Confidence 999999999875332110 0000 01123455555553 2466777888776532222111111110 1
Q ss_pred eeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 309 ~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
........--.+|++++|+|-. ..|||||.||.|.+||..++
T Consensus 223 r~~~~~~~~~yPVNai~Fhp~~-~tfaTgGsDG~V~~Wd~~~r 264 (323)
T KOG1036|consen 223 RLSEKDTEIIYPVNAIAFHPIH-GTFATGGSDGIVNIWDLFNR 264 (323)
T ss_pred ecccCCceEEEEeceeEecccc-ceEEecCCCceEEEccCcch
Confidence 1111112223689999999975 46899999999999998653
No 133
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.90 E-value=5e-20 Score=160.27 Aligned_cols=272 Identities=15% Similarity=0.175 Sum_probs=173.8
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE-EEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
.+++|++.|+.+++|+..+++... .+. +...+..++|+|+++.+ ++++.++.+.+||..+++. ...+..+
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~----~~~--~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~~- 72 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTR----TFP--VGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEV--IGTLPSG- 72 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEE----EEE--CCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcE--EEeccCC-
Confidence 478999999999999987764322 221 12346789999999876 5677889999999876543 3334433
Q ss_pred CCeeEEEECCCCcEEEE-eeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCc-EEEEecCCCC
Q 018675 119 NEVKSVSWNASGTLLAT-CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT-IKVWWAEDTD 196 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s-~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~-i~iw~~~~~~ 196 (352)
..+..+.|+|+++.+++ ++.|+.+++||+.... .+..+.. ...+..+.|+|++..+++++.++. +.+|+....
T Consensus 73 ~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~---~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~- 147 (300)
T TIGR03866 73 PDPELFALHPNGKILYIANEDDNLVTVIDIETRK---VLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTY- 147 (300)
T ss_pred CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCe---EEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCC-
Confidence 33567899999987654 5568999999986543 2333332 234678999999999998887754 556654321
Q ss_pred CCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE-EEeCCCcEEEEcCCccccccCCCCccceeeEEeeccc--CcceEE
Q 018675 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH--DRTIFS 273 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~ 273 (352)
.....+. ....+.++.|+|++++|+ ++..++.|++||++..+.... +. ......+ ......
T Consensus 148 ----~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~-----~~--~~~~~~~~~~~~~~~ 211 (300)
T TIGR03866 148 ----EIVDNVL-----VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKK-----IT--FEIPGVHPEAVQPVG 211 (300)
T ss_pred ----eEEEEEE-----cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeee-----ee--ecccccccccCCccc
Confidence 1222111 122356789999999885 445699999999864321100 00 0000000 112335
Q ss_pred EEecCCce--EEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 274 VHWSREGI--IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 274 ~~~~~~~~--~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+.+++++. +++...++.+.+|+.....+ .... .+...+.+++|+|+++.++++++.+|.|+|||+...
T Consensus 212 i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~---------~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~ 281 (300)
T TIGR03866 212 IKLTKDGKTAFVALGPANRVAVVDAKTYEV---------LDYL-LVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAAL 281 (300)
T ss_pred eEECCCCCEEEEEcCCCCeEEEEECCCCcE---------EEEE-EeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCC
Confidence 66777663 34455567789986532211 1111 233468999999999866555677999999998753
No 134
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.89 E-value=9.5e-21 Score=154.53 Aligned_cols=319 Identities=19% Similarity=0.343 Sum_probs=210.5
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC----CCEEEEE
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS----GKLLATA 92 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~----~~~l~s~ 92 (352)
.++|...|++++|.+.... ...+.+||+| ...+.+|+.......-.........|....+.|+|+-+ ..++|.|
T Consensus 34 ~ed~~~~I~gv~fN~~~~~-~e~~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~ 111 (385)
T KOG1034|consen 34 KEDHNKPIFGVAFNSFLGC-DEPQVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAG 111 (385)
T ss_pred hccCCCccceeeeehhcCC-CCCceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEee
Confidence 4689999999999874321 1246677765 55788887654432111111122347778889999654 4588899
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
+.-|.|++.|...+ ++...+.+|...|+.+.++|. .++++++|.|.+|++|+++...=.....-..+|...|.+++|
T Consensus 112 G~~GvIrVid~~~~--~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~ 189 (385)
T KOG1034|consen 112 GYLGVIRVIDVVSG--QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDF 189 (385)
T ss_pred cceeEEEEEecchh--hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEE
Confidence 99999999998765 456778899999999999995 468999999999999999765322223345689999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCC-------------CCceeEee----ee--ccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDS-------------DNWHCVQT----IS--ESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~-------------~~~~~~~~----~~--~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
++++.++++++.|.++++|.+...+- .+.....+ +. .....|...|-++.|- |++++|=
T Consensus 190 ~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSk 267 (385)
T KOG1034|consen 190 SLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSK 267 (385)
T ss_pred cCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeec
Confidence 99999999999999999998762110 00000000 00 1234577777777776 5789998
Q ss_pred eCCCcEEEEcC-CccccccCCCCccceeeEEe---ecccCcceEEE--EecC-CceEEecCCCCeEEEEEccCCccccCc
Q 018675 233 SDDLTIKIWGA-DITRMQSGDGYASWRHLCTI---SGYHDRTIFSV--HWSR-EGIIASGAADDSVQFFVESKDDLIDGP 305 (352)
Q Consensus 233 ~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~--~~~~-~~~~~s~~~d~~v~~~~~~~~~~~~~~ 305 (352)
+-++.|..|.. ++.+.. .+........+. ..+....++-+ ++++ ..+++.|.+.|.+++|+....+-.
T Consensus 268 scenaI~~w~pgkl~e~~--~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~--- 342 (385)
T KOG1034|consen 268 SCENAIVCWKPGKLEESI--HNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPP--- 342 (385)
T ss_pred ccCceEEEEecchhhhhh--hccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCc---
Confidence 88999999965 221110 000000011111 11223334444 3333 358999999999999976543221
Q ss_pred ccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 306 SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 306 ~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.........-...|...+||-|+. +|+...+|++|-=||.-
T Consensus 343 --~~ttl~~s~~~~tVRQ~sfS~dgs-~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 343 --KCTTLTHSKSGSTVRQTSFSRDGS-ILVLVCDDGTVWRWDRV 383 (385)
T ss_pred --cCceEEeccccceeeeeeecccCc-EEEEEeCCCcEEEEEee
Confidence 111111122356899999999987 56678889999888864
No 135
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=1.2e-20 Score=152.75 Aligned_cols=227 Identities=25% Similarity=0.473 Sum_probs=164.1
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecC-----CCceeeeeeeeeecceecceEEEEECCC
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQS-----ASSRFWNCKAVLEEMHTRTVRSCAWSPS 85 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~-----~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 85 (352)
..+...-+.|.+.|+-|.|-+.. .|+.+|+||.|++++||+-. .....|.....+ ..-...|+.+.|.|.
T Consensus 49 W~~Ts~Wrah~~Si~rV~WAhPE----fGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl-~DsrssV~DV~FaP~ 123 (361)
T KOG2445|consen 49 WSCTSSWRAHDGSIWRVVWAHPE----FGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTL-VDSRSSVTDVKFAPK 123 (361)
T ss_pred eEEeeeEEecCCcEEEEEecCcc----ccceEEEEecCCceeeeeecccccccccceeEEEEEe-ecCCcceeEEEecch
Confidence 45666778899999999996543 37999999999999999642 112234333333 224578999999995
Q ss_pred --CCEEEEEeCCCcEEEEEccCC----ceeeeEeec-------cccCCeeEEEECCC---CcEEEEeeCC-----CcEEE
Q 018675 86 --GKLLATASFDATTCIWEDVGG----DYECVATLE-------GHENEVKSVSWNAS---GTLLATCGRD-----KSVWI 144 (352)
Q Consensus 86 --~~~l~s~~~d~~i~i~~~~~~----~~~~~~~~~-------~h~~~v~~v~~~~~---~~~l~s~~~d-----~~v~v 144 (352)
|-.||+++.||.++||+.... .+.+...++ .+...-.|+.|+|. ..+|+.|+.+ +.+.+
T Consensus 124 hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~I 203 (361)
T KOG2445|consen 124 HLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKI 203 (361)
T ss_pred hcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEE
Confidence 678999999999999985421 112222222 45567789999974 3467766665 47889
Q ss_pred EecCCCC-eeEEEEEeecCccCeeEEEEcCC----CCEEEEEeCCCcEEEEecCCCC----------CCC-c-eeEeeee
Q 018675 145 WEVMPGN-EFECVSVLQGHAQDVKMVQWHPT----MDVLFSCSYDNTIKVWWAEDTD----------SDN-W-HCVQTIS 207 (352)
Q Consensus 145 wd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~----~~~l~s~~~d~~i~iw~~~~~~----------~~~-~-~~~~~~~ 207 (352)
|.-.... ....+..+.+|..+|+.++|.|. ..+|++++.|| |+||.+.... ... . ..+..+
T Consensus 204 ye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~v- 281 (361)
T KOG2445|consen 204 YEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKV- 281 (361)
T ss_pred EEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEe-
Confidence 9865433 56667788899999999999996 34789999999 9999876311 110 0 111112
Q ss_pred ccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 208 ~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.....|...|+.+.|+=.|..|++.|.||.||+|..+
T Consensus 282 s~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 282 SELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred eeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 3456899999999999999999999999999999754
No 136
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=6.7e-23 Score=182.51 Aligned_cols=253 Identities=21% Similarity=0.406 Sum_probs=194.5
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN 119 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~ 119 (352)
.+++....+-.+++|+.... ..|...|.++..-..++.+++|+.|-.+.+|... +...+..+.+|..
T Consensus 5 ~~~m~~~~~t~Lr~~~~~~~-----------~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~--kp~~i~S~~~hes 71 (825)
T KOG0267|consen 5 EFLMKTKRATKLRVWDTREF-----------VAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIG--KPNAITSLTGHES 71 (825)
T ss_pred cccceeeeeeccccccchhh-----------hhhhhhhceeeeeccceeeccCCCceeecccccc--CCchhheeeccCC
Confidence 34566666777888875421 2377788888777788999999999999999653 2234556889999
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN 199 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 199 (352)
+|.++.|++...+|++|+.||+|++||+.... .++.+.+|..++.++.|+|-+.+.++|+.|..+++||....
T Consensus 72 pIeSl~f~~~E~LlaagsasgtiK~wDleeAk---~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~---- 144 (825)
T KOG0267|consen 72 PIESLTFDTSERLLAAGSASGTIKVWDLEEAK---IVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKK---- 144 (825)
T ss_pred cceeeecCcchhhhcccccCCceeeeehhhhh---hhhhhhccccCcceeeeccceEEeccccccccceehhhhcc----
Confidence 99999999999999999999999999997553 46688899999999999999999999999999999976532
Q ss_pred ceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC
Q 018675 200 WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE 279 (352)
Q Consensus 200 ~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 279 (352)
.|.+.. ++|...+..+.|+|+|.+++++++|..++|||+...++. ..+ ..|+..+.++.+.+.
T Consensus 145 -Gc~~~~----~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~-----------~ef-~~~e~~v~sle~hp~ 207 (825)
T KOG0267|consen 145 -GCSHTY----KSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLS-----------KEF-KSHEGKVQSLEFHPL 207 (825)
T ss_pred -Cceeee----cCCcceeEEEeecCCCceeeccCCcceeeeecccccccc-----------ccc-ccccccccccccCch
Confidence 233332 368889999999999999999999999999997533221 111 125667777888876
Q ss_pred c-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecC
Q 018675 280 G-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 339 (352)
Q Consensus 280 ~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~ 339 (352)
. .++.|+.|+++++|+...- +++.........|.+.+|+|++.. +.+|-.
T Consensus 208 e~Lla~Gs~d~tv~f~dletf---------e~I~s~~~~~~~v~~~~fn~~~~~-~~~G~q 258 (825)
T KOG0267|consen 208 EVLLAPGSSDRTVRFWDLETF---------EVISSGKPETDGVRSLAFNPDGKI-VLSGEQ 258 (825)
T ss_pred hhhhccCCCCceeeeecccee---------EEeeccCCccCCceeeeecCCcee-eecCch
Confidence 6 5789999999999976432 222333344678999999999863 445543
No 137
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=6.1e-20 Score=167.87 Aligned_cols=269 Identities=19% Similarity=0.350 Sum_probs=197.9
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCc
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
.+|++.-+.|+|.|+ +.++.||+.||.|++|+...... . +..+ ..+...|.+++.. +.++++|+.+++
T Consensus 10 yaht~G~t~i~~d~~------gefi~tcgsdg~ir~~~~~sd~e--~-P~ti-~~~g~~v~~ia~~--s~~f~~~s~~~t 77 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPD------GEFICTCGSDGDIRKWKTNSDEE--E-PETI-DISGELVSSIACY--SNHFLTGSEQNT 77 (933)
T ss_pred hhccCceEEEEEcCC------CCEEEEecCCCceEEeecCCccc--C-Cchh-hccCceeEEEeec--ccceEEeeccce
Confidence 368888999999997 57999999999999998654421 1 1222 1256677777655 448999999999
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
|.+|....++..-+ +.-.+-++++++++.+|++++.||+|-.|++-++..... ...+.+|..+|.++.|+|.+.+
T Consensus 78 v~~y~fps~~~~~i--L~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~---~~~lrgh~apVl~l~~~p~~~f 152 (933)
T KOG1274|consen 78 VLRYKFPSGEEDTI--LARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQ---EKVLRGHDAPVLQLSYDPKGNF 152 (933)
T ss_pred EEEeeCCCCCccce--eeeeeccceEEEEecCCcEEEeecCceeEEEEeccccch---heeecccCCceeeeeEcCCCCE
Confidence 99998766543322 222356789999999999999999999999998865442 4567899999999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeee---ccCCC-CcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCC
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTIS---ESNNG-HSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG 253 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~---~~~~~-h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (352)
|++.+-||.+++|++.+... ..++. ..... ....+..++|+|++..++..+.|+.|++|+.+
T Consensus 153 LAvss~dG~v~iw~~~~~~~-----~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~--------- 218 (933)
T KOG1274|consen 153 LAVSSCDGKVQIWDLQDGIL-----SKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRK--------- 218 (933)
T ss_pred EEEEecCceEEEEEcccchh-----hhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccC---------
Confidence 99999999999998865321 11111 11111 13456779999998889999999999999753
Q ss_pred CccceeeEEeecc-cCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 254 YASWRHLCTISGY-HDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 254 ~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
.|.....+... +...+..+.|+|.| |+|++.-||.|.+|+....+ .+.....|++++|.|+..
T Consensus 219 --~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~-------------~~~~~~~Vc~~aw~p~~n 283 (933)
T KOG1274|consen 219 --GWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHE-------------RHEFKRAVCCEAWKPNAN 283 (933)
T ss_pred --CceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccch-------------hccccceeEEEecCCCCC
Confidence 34444444332 33347778999987 89999999999999664310 122346799999999865
Q ss_pred c
Q 018675 332 R 332 (352)
Q Consensus 332 ~ 332 (352)
.
T Consensus 284 ~ 284 (933)
T KOG1274|consen 284 A 284 (933)
T ss_pred e
Confidence 3
No 138
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=2.8e-19 Score=158.55 Aligned_cols=293 Identities=17% Similarity=0.296 Sum_probs=206.4
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
-..|.|++++..+ ..||.+=.||.|.+|++... |-+...+.....+.|.+++|++ +..|.+.+.+|+|.-
T Consensus 25 Ps~I~slA~s~kS------~~lAvsRt~g~IEiwN~~~~---w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~E 94 (691)
T KOG2048|consen 25 PSEIVSLAYSHKS------NQLAVSRTDGNIEIWNLSNN---WFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITE 94 (691)
T ss_pred ccceEEEEEeccC------CceeeeccCCcEEEEccCCC---ceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEE
Confidence 3578899998764 46888889999999998764 3333333233457899999994 556778889999999
Q ss_pred EEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEE
Q 018675 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 180 (352)
||..+.+ +...++...+.|++++.+|.+..++.|++||.+..+++.++. ..-...+......+.+++|+|++..+++
T Consensus 95 wDl~~lk--~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~-I~~~r~l~rq~sRvLslsw~~~~~~i~~ 171 (691)
T KOG2048|consen 95 WDLHTLK--QKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDK-ITYKRSLMRQKSRVLSLSWNPTGTKIAG 171 (691)
T ss_pred EecccCc--eeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCce-EEEEeecccccceEEEEEecCCccEEEe
Confidence 9988764 455666777899999999999999999999966666654332 2222344445578999999999999999
Q ss_pred EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceee
Q 018675 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHL 260 (352)
Q Consensus 181 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 260 (352)
|+.||.|++||....+..-... ..+.....+-..-||+|.|=.++ .||+|..-|+|++||.....+. +.
T Consensus 172 Gs~Dg~Iriwd~~~~~t~~~~~-~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLi---------qS 240 (691)
T KOG2048|consen 172 GSIDGVIRIWDVKSGQTLHIIT-MQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLI---------QS 240 (691)
T ss_pred cccCceEEEEEcCCCceEEEee-ecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchh---------hh
Confidence 9999999999876543211000 01111112234568999887554 6899999999999986532211 11
Q ss_pred EEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecC
Q 018675 261 CTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 339 (352)
Q Consensus 261 ~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~ 339 (352)
...|...+.+++..++ .++.+++.|+.+.-+......- ..........|...|.+++..++ .+++||.
T Consensus 241 ---~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~-----~wv~~~~r~~h~hdvrs~av~~~---~l~sgG~ 309 (691)
T KOG2048|consen 241 ---HSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKS-----EWVINSRRDLHAHDVRSMAVIEN---ALISGGR 309 (691)
T ss_pred ---hhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCcc-----ceeeeccccCCcccceeeeeecc---eEEecce
Confidence 1135667888888887 6899999999877665433211 02222334567788999998864 5779999
Q ss_pred CCeEEEEee
Q 018675 340 DGMIKIWEL 348 (352)
Q Consensus 340 Dg~i~iw~~ 348 (352)
|.++-+-..
T Consensus 310 d~~l~i~~s 318 (691)
T KOG2048|consen 310 DFTLAICSS 318 (691)
T ss_pred eeEEEEccc
Confidence 998876443
No 139
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=1.5e-19 Score=160.35 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=184.7
Q ss_pred eecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccc-cCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGH-ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
....|+++||+.+.+.||.+-.||.|-+|+...+ +.+..++.++ +..|.+++|++ +..|++.+.+|+|.-||+...+
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~-w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk 101 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNN-WFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLK 101 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCC-ceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCc
Confidence 4578999999999999999999999999998764 3444455554 46799999995 5577899999999999997654
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
+ ...+......|++++.+|.+..++.|++||.+.++...... .+........++.|.+|+|+|++..+++
T Consensus 102 ~---~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~-------I~~~r~l~rq~sRvLslsw~~~~~~i~~ 171 (691)
T KOG2048|consen 102 Q---KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDK-------ITYKRSLMRQKSRVLSLSWNPTGTKIAG 171 (691)
T ss_pred e---eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCce-------EEEEeecccccceEEEEEecCCccEEEe
Confidence 3 44455667789999999999999999999966665433211 1122223345689999999999999999
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceee
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLL 311 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~ 311 (352)
|+.||.|++||.......-.. -.+...+.....-.++++.+-.++.+++|.+.|+|.+|+.... .++
T Consensus 172 Gs~Dg~Iriwd~~~~~t~~~~----~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~g---------TLi 238 (691)
T KOG2048|consen 172 GSIDGVIRIWDVKSGQTLHII----TMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFG---------TLI 238 (691)
T ss_pred cccCceEEEEEcCCCceEEEe----eecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCc---------chh
Confidence 999999999997643211000 0000111111233477888888999999999999999976443 334
Q ss_pred ecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 312 ~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+....|...|.+++..+++.. +.++|.|+.|.-+...
T Consensus 239 qS~~~h~adVl~Lav~~~~d~-vfsaGvd~~ii~~~~~ 275 (691)
T KOG2048|consen 239 QSHSCHDADVLALAVADNEDR-VFSAGVDPKIIQYSLT 275 (691)
T ss_pred hhhhhhhcceeEEEEcCCCCe-EEEccCCCceEEEEec
Confidence 456789999999999998765 5689999988776653
No 140
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=1.3e-20 Score=157.25 Aligned_cols=318 Identities=14% Similarity=0.142 Sum_probs=212.8
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCC--ceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS--SRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
.+.+|.+.|+++.|+.+ +++|++|+.|..+++|+.+.. .+.-++.......|...|.|++|....+.+.+|+
T Consensus 51 D~~~H~GCiNAlqFS~N------~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~ 124 (609)
T KOG4227|consen 51 DVREHTGCINALQFSHN------DRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGE 124 (609)
T ss_pred hhhhhccccceeeeccC------CeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCC
Confidence 45689999999999986 489999999999999987531 1111223334455778999999999999999999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.++++.+.|..+.+..-+..-....+.|..+..+|..+.|++.+.++.|.+||++..+.-.....+.........+-|+|
T Consensus 125 ~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P 204 (609)
T KOG4227|consen 125 RWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHP 204 (609)
T ss_pred CcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecC
Confidence 99999999988764322222222335899999999999999999999999999875442111122222334567788999
Q ss_pred CCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc---cc
Q 018675 174 TMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR---MQ 249 (352)
Q Consensus 174 ~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~ 249 (352)
... ++++++..+.+.+||.+......++....+ .+......-.++.|+|+|+.|++--....=.+||+-..+ ++
T Consensus 205 ~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~--~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k 282 (609)
T KOG4227|consen 205 ETPALILVNSETGGPNVFDRRMQARPVYQRSMFK--GLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLK 282 (609)
T ss_pred CCceeEEeccccCCCCceeeccccchHHhhhccc--cCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEe
Confidence 654 678889999999998765432211111100 000101122467899999988876655555566653321 11
Q ss_pred cCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccC---------c-----ccceeeeccc
Q 018675 250 SGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDG---------P-----SYKMLLKKEK 315 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~---------~-----~~~~~~~~~~ 315 (352)
...+.... .+..++.+++|..+..+++|+.+-.+++|......-..+ . .....+..+.
T Consensus 283 ~D~N~~GY--------~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLr 354 (609)
T KOG4227|consen 283 SDHNPNGY--------CNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLR 354 (609)
T ss_pred ccCCCCcc--------eeeeeeeeeeeecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEe
Confidence 11000000 123456778888888899999999999996543211100 0 0111123457
Q ss_pred ccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 316 AHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 316 ~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
||..-++.+.|+|.. ++|++.|..+.++||+-.+
T Consensus 355 GHRSv~NQVRF~~H~-~~l~SSGVE~~~KlWS~~r 388 (609)
T KOG4227|consen 355 GHRSVPNQVRFSQHN-NLLVSSGVENSFKLWSDHR 388 (609)
T ss_pred cccccccceeecCCc-ceEeccchhhheecccccc
Confidence 999999999999976 6899999999999998654
No 141
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.88 E-value=3.7e-20 Score=155.01 Aligned_cols=298 Identities=22% Similarity=0.360 Sum_probs=191.5
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce-----eeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR-----FWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
..+|+++.|.+.. ...+|||+.|..||+|.+..... .......+ ..|..+|+++.|+|+|.+||+|+.+
T Consensus 13 ~~pv~s~dfq~n~-----~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~L-s~H~~aVN~vRf~p~gelLASg~D~ 86 (434)
T KOG1009|consen 13 HEPVYSVDFQKNS-----LNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSL-SRHTRAVNVVRFSPDGELLASGGDG 86 (434)
T ss_pred CCceEEEEeccCc-----ccceecccCccceeeeeeeecCCCCCceeEEEeecc-cCCcceeEEEEEcCCcCeeeecCCC
Confidence 4689999999874 23899999999999997654321 11111112 3589999999999999999999999
Q ss_pred CcEEEEEcc--------C------CceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec
Q 018675 96 ATTCIWEDV--------G------GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161 (352)
Q Consensus 96 ~~i~i~~~~--------~------~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 161 (352)
|.+.+|... + ..+.....+.+|...|..++|+|++.++++++.|+++++||+..+. ....+..
T Consensus 87 g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~---l~~~~~d 163 (434)
T KOG1009|consen 87 GEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQ---LLAILDD 163 (434)
T ss_pred ceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccce---eEeeccc
Confidence 999999754 1 1134455678899999999999999999999999999999997654 4566778
Q ss_pred CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeE---eeeeccCCC--------C----cccEEEEEEcCCC
Q 018675 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV---QTISESNNG--------H----SSTIWALSFNAKG 226 (352)
Q Consensus 162 h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~~~~--------h----~~~i~~l~~~~~~ 226 (352)
|..-+..++|.|..+++++-+.|+..+.+........ .... ........+ | ......++|+|+|
T Consensus 164 h~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~-~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG 242 (434)
T KOG1009|consen 164 HEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVI-KRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDG 242 (434)
T ss_pred cccccceeecchhhhhhhhhccCcccceeeeeeeeee-eeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCC
Confidence 8888999999999999999998886655533221110 0000 000000000 1 1233457899999
Q ss_pred CEEEEEeC----CCcE-----EEEcCCccccccCCCCccceeeEEeecccCcceEEEEe------------------cCC
Q 018675 227 DKLVSCSD----DLTI-----KIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHW------------------SRE 279 (352)
Q Consensus 227 ~~l~s~~~----dg~i-----~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------------------~~~ 279 (352)
.+|++... ++.+ .+|+-.. ..++.+.+.. .......+.+ -|-
T Consensus 243 ~llvtPag~~~~g~~~~~n~tYvfsrk~----------l~rP~~~lp~-~~k~~lavr~~pVy~elrp~~~~~~~~~lpy 311 (434)
T KOG1009|consen 243 SLLVTPAGLFKVGGGVFRNTSYVFSRKD----------LKRPAARLPS-PKKPALAVRFSPVYYELRPLSSEKFLFVLPY 311 (434)
T ss_pred cEEEcccceeeeCCceeeceeEeecccc----------ccCceeecCC-CCcceEEEEeeeeEEEecccccccccccccc
Confidence 99887642 2222 2232110 0011111111 0111111111 123
Q ss_pred ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 280 GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 280 ~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
+++.+....+.+++|+.. ....+.....-|-.+|++++|++||.. ++-.|.||...+-.+
T Consensus 312 rlvfaiAt~~svyvydtq--------~~~P~~~v~nihy~~iTDiaws~dg~~-l~vSS~DGyCS~vtf 371 (434)
T KOG1009|consen 312 RLVFAIATKNSVYVYDTQ--------TLEPLAVVDNIHYSAITDIAWSDDGSV-LLVSSTDGFCSLVTF 371 (434)
T ss_pred ceEEEEeecceEEEeccc--------cccceEEEeeeeeeeecceeecCCCcE-EEEeccCCceEEEEE
Confidence 455566667777877432 111222234467889999999999974 556888997665444
No 142
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=1.4e-20 Score=159.16 Aligned_cols=206 Identities=21% Similarity=0.369 Sum_probs=150.9
Q ss_pred EEEEccCC-CCCCCccEEEEeeCCCeEEEEecCCCceeeee----------------eeeeecceecceEEEEECCCC-C
Q 018675 26 SLAWKPTA-GVDGVAPVFASCSGDKTVRIWEQSASSRFWNC----------------KAVLEEMHTRTVRSCAWSPSG-K 87 (352)
Q Consensus 26 ~i~~~p~~-~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~----------------~~~~~~~h~~~v~~~~~s~~~-~ 87 (352)
|+.|.-.. ...+.+.++|.|.-|..|.|||+.-...+.-+ +......|+..|.+++|+..- .
T Consensus 178 C~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~n 257 (463)
T KOG0270|consen 178 CIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRN 257 (463)
T ss_pred hhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccce
Confidence 55553221 13455789999999999999997533211100 011112588889999998754 5
Q ss_pred EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
.||+||.|.++++||..+++ +...+..|.+.|.++.|+| .+..|++|+.|++|.+.|.+..........+ ...|
T Consensus 258 VLaSgsaD~TV~lWD~~~g~--p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~---~g~V 332 (463)
T KOG0270|consen 258 VLASGSADKTVKLWDVDTGK--PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF---DGEV 332 (463)
T ss_pred eEEecCCCceEEEEEcCCCC--cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe---ccce
Confidence 79999999999999998874 5667778999999999998 5678999999999999998742221112222 3467
Q ss_pred eEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEcCC
Q 018675 167 KMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 167 ~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~-~~l~s~~~dg~i~iwd~~ 244 (352)
-.++|.|... .++++..||.++-+|++.... ++.++ .+|..+|.+|++++.- .++++++.|+.|++|++.
T Consensus 333 Ekv~w~~~se~~f~~~tddG~v~~~D~R~~~~----~vwt~----~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 333 EKVAWDPHSENSFFVSTDDGTVYYFDIRNPGK----PVWTL----KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred EEEEecCCCceeEEEecCCceEEeeecCCCCC----ceeEE----EeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence 8889988654 577888999999998876542 23333 3799999999999864 568899999999999874
No 143
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.87 E-value=2e-20 Score=151.86 Aligned_cols=207 Identities=22% Similarity=0.350 Sum_probs=155.5
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
.+..+-.|.+.|+++.|.|..+ ...|++|+.||.|.+|+... |.+...+ +.|.+.|+.++.+|.|++.++.
T Consensus 75 qlg~ll~HagsitaL~F~~~~S----~shLlS~sdDG~i~iw~~~~----W~~~~sl-K~H~~~Vt~lsiHPS~KLALsV 145 (362)
T KOG0294|consen 75 QLGILLSHAGSITALKFYPPLS----KSHLLSGSDDGHIIIWRVGS----WELLKSL-KAHKGQVTDLSIHPSGKLALSV 145 (362)
T ss_pred hhcceeccccceEEEEecCCcc----hhheeeecCCCcEEEEEcCC----eEEeeee-cccccccceeEecCCCceEEEE
Confidence 4456668999999999988642 24899999999999999765 3333333 5688899999999999999999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
+.|+.++.|+..+++...+..+. + ..+.+.|+|.|.+|+.++.++ |-+|.+.....+..+ ..+..+.++.|.
T Consensus 146 g~D~~lr~WNLV~Gr~a~v~~L~-~--~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i----~~~~r~l~~~~l 217 (362)
T KOG0294|consen 146 GGDQVLRTWNLVRGRVAFVLNLK-N--KATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREI----ENPKRILCATFL 217 (362)
T ss_pred cCCceeeeehhhcCccceeeccC-C--cceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhh----hccccceeeeec
Confidence 99999999999887654444443 2 234499999999998888765 889987543321111 112345666665
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEE--cCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF--NAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~--~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
++..|++|+.|+.|.+||..+. .+.. ...+|..+|.++.+ +|++.||+|.+.||.|++||+++.
T Consensus 218 -~~~~L~vG~d~~~i~~~D~ds~-----~~~~----~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 218 -DGSELLVGGDNEWISLKDTDSD-----TPLT----EFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred -CCceEEEecCCceEEEeccCCC-----ccce----eeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 4567899999999999975431 1122 23489999999984 678899999999999999998754
No 144
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.87 E-value=2.4e-19 Score=162.44 Aligned_cols=309 Identities=19% Similarity=0.297 Sum_probs=221.2
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
.+.+++---++|++++|.-+. .+.+|++..-|.+.+||++..+. ....+..|.+.|....|-|....++++
T Consensus 236 il~sFk~d~g~VtslSFrtDG-----~p~las~~~~G~m~~wDLe~kkl----~~v~~nah~~sv~~~~fl~~epVl~ta 306 (910)
T KOG1539|consen 236 ILMSFKQDWGRVTSLSFRTDG-----NPLLASGRSNGDMAFWDLEKKKL----INVTRNAHYGSVTGATFLPGEPVLVTA 306 (910)
T ss_pred EEEEEEccccceeEEEeccCC-----CeeEEeccCCceEEEEEcCCCee----eeeeeccccCCcccceecCCCceEeec
Confidence 344555334899999998764 47899999999999999987643 234445788899999999999999999
Q ss_pred eCCCcEEEEEccCCc--eeeeEeeccccCCeeEEEEC-CCCcEEEEeeCCCcEEEEecCCCC---------------e--
Q 018675 93 SFDATTCIWEDVGGD--YECVATLEGHENEVKSVSWN-ASGTLLATCGRDKSVWIWEVMPGN---------------E-- 152 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~--~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~~~d~~v~vwd~~~~~---------------~-- 152 (352)
+.|+.+++|-..+++ ...+....||..+..|+.|. .++.++.+++.|++++.+++.... .
T Consensus 307 ~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~ 386 (910)
T KOG1539|consen 307 GADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVN 386 (910)
T ss_pred cCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhccccccccccccc
Confidence 999999998544332 23344557999999999997 678899999999998887652100 0
Q ss_pred -e-------EE--------------------------E------------EEee-----cCccCeeEEEEcCCCCEEEEE
Q 018675 153 -F-------EC--------------------------V------------SVLQ-----GHAQDVKMVQWHPTMDVLFSC 181 (352)
Q Consensus 153 -~-------~~--------------------------~------------~~~~-----~h~~~v~~~~~~~~~~~l~s~ 181 (352)
. .+ . +.+. .....+++++.++.|++.+.|
T Consensus 387 ~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG 466 (910)
T KOG1539|consen 387 VFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIG 466 (910)
T ss_pred ccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEe
Confidence 0 00 0 0000 111357788899999999999
Q ss_pred eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC----CCCccc
Q 018675 182 SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASW 257 (352)
Q Consensus 182 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~~~ 257 (352)
+..|.|-+|++...-. ..++ ....+|..+|..|+....++.+++++.+|.+++||++...+... ......
T Consensus 467 ~S~G~Id~fNmQSGi~-----r~sf-~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~i 540 (910)
T KOG1539|consen 467 YSKGTIDRFNMQSGIH-----RKSF-GDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGI 540 (910)
T ss_pred ccCCeEEEEEcccCee-----eccc-ccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCccee
Confidence 9999999998765321 1112 12347999999999999999999999999999999864331110 000000
Q ss_pred e---------------ee----------EEeecccCcceEEEEecCCce-EEecCCCCeEEEEEccCCccccCcccceee
Q 018675 258 R---------------HL----------CTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLL 311 (352)
Q Consensus 258 ~---------------~~----------~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~ 311 (352)
. .+ ....-.|.+.|..+++++++. +++++-|++|++|+.....+.+.
T Consensus 541 v~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~------- 613 (910)
T KOG1539|consen 541 VYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDG------- 613 (910)
T ss_pred eeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeee-------
Confidence 0 00 000123788899999999984 88999999999997654433321
Q ss_pred ecccccCcceeEEEecCCCcceEEEecCC-CeEEEEe
Q 018675 312 KKEKAHDMDVNSVQWSPGERRLLASASDD-GMIKIWE 347 (352)
Q Consensus 312 ~~~~~h~~~i~~~~~sp~~~~~l~s~~~D-g~i~iw~ 347 (352)
.....+++.++|||+|. +|||+..| .-|.+|.
T Consensus 614 ---~~vd~~~~sls~SPngD-~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 614 ---LLVDSPCTSLSFSPNGD-FLATVHVDQNGIYLWS 646 (910)
T ss_pred ---EecCCcceeeEECCCCC-EEEEEEecCceEEEEE
Confidence 12356789999999996 78999998 5588986
No 145
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=2.8e-20 Score=158.22 Aligned_cols=209 Identities=18% Similarity=0.257 Sum_probs=160.3
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~ 101 (352)
+.|.|++-+|. +.+++.|.-.+.+.+|.+.++..+. .+ ..|-.+|+++.|+-||.+|+||+.||.+.+|
T Consensus 82 g~v~al~s~n~------G~~l~ag~i~g~lYlWelssG~LL~----v~-~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW 150 (476)
T KOG0646|consen 82 GPVHALASSNL------GYFLLAGTISGNLYLWELSSGILLN----VL-SAHYQSITCLKFSDDGSHIITGSKDGAVLVW 150 (476)
T ss_pred cceeeeecCCC------ceEEEeecccCcEEEEEeccccHHH----HH-HhhccceeEEEEeCCCcEEEecCCCccEEEE
Confidence 56888888776 4567766699999999999885432 22 4577899999999999999999999999999
Q ss_pred Ecc-------CCceeeeEeeccccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 102 EDV-------GGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 102 ~~~-------~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
... +....+...+..|.-+|+.+...+. ..+++|+|.|.++++||+..+... ..+ .....+++++..
T Consensus 151 ~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LL---lti-~fp~si~av~lD 226 (476)
T KOG0646|consen 151 LLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLL---LTI-TFPSSIKAVALD 226 (476)
T ss_pred EEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceee---EEE-ecCCcceeEEEc
Confidence 742 2234567778899999999988664 358999999999999999766422 222 234578999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCC--CCC-----ceeEeeeeccCCCCcc--cEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDTD--SDN-----WHCVQTISESNNGHSS--TIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~~--~~~-----~~~~~~~~~~~~~h~~--~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
|-+..++.|+.+|.|.+.++.... ... ...-.+-.....||.+ +|++|+++-||.+|++|+.||.+.|||.
T Consensus 227 pae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi 306 (476)
T KOG0646|consen 227 PAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDI 306 (476)
T ss_pred ccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEec
Confidence 999999999999999887654422 110 0000111123457877 9999999999999999999999999997
Q ss_pred Cc
Q 018675 244 DI 245 (352)
Q Consensus 244 ~~ 245 (352)
..
T Consensus 307 ~S 308 (476)
T KOG0646|consen 307 YS 308 (476)
T ss_pred ch
Confidence 54
No 146
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.5e-20 Score=152.84 Aligned_cols=218 Identities=24% Similarity=0.355 Sum_probs=146.2
Q ss_pred EeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE--EE--EEeecCccCeeEEEEcCCCCE-EEEEeCCCc
Q 018675 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE--CV--SVLQGHAQDVKMVQWHPTMDV-LFSCSYDNT 186 (352)
Q Consensus 112 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~--~~--~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~ 186 (352)
.++++|.+.|++++|+.+|+.|+|++.|++|++|+++.-...+ ++ ..-.+| .+.+.|.||-+- +++......
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dh---pT~V~FapDc~s~vv~~~~g~~ 156 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDH---PTRVVFAPDCKSVVVSVKRGNK 156 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCC---ceEEEECCCcceEEEEEccCCE
Confidence 4678999999999999999999999999999999986432111 11 111123 467889998664 455666778
Q ss_pred EEEEecCCCCCCCceeE-eeee--ccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEe
Q 018675 187 IKVWWAEDTDSDNWHCV-QTIS--ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTI 263 (352)
Q Consensus 187 i~iw~~~~~~~~~~~~~-~~~~--~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 263 (352)
+++|............. ..+. +....|.-.|..+-.-..+.+|++++.|..|.+|+++-..++..+.
T Consensus 157 l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idt---------- 226 (420)
T KOG2096|consen 157 LCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDT---------- 226 (420)
T ss_pred EEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeecc----------
Confidence 99996543222211100 0000 1123466777777777889999999999999999987333322111
Q ss_pred ecccCcceEEEEecCCc-eEEecCCCCeEEEEEcc--CCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCC
Q 018675 264 SGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES--KDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDD 340 (352)
Q Consensus 264 ~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~D 340 (352)
+....+..+.+|+| ++++++-.-.+++|..- ++.-++. ... ..++.||+..|+.++|||+.++ ++|.|.|
T Consensus 227 ---nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqe--v~r-vf~LkGH~saV~~~aFsn~S~r-~vtvSkD 299 (420)
T KOG2096|consen 227 ---NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQE--VKR-VFSLKGHQSAVLAAAFSNSSTR-AVTVSKD 299 (420)
T ss_pred ---ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhh--hhh-hheeccchhheeeeeeCCCcce-eEEEecC
Confidence 11223445667877 56677777788999642 2111111 111 1256899999999999999887 6799999
Q ss_pred CeEEEEeec
Q 018675 341 GMIKIWELA 349 (352)
Q Consensus 341 g~i~iw~~~ 349 (352)
|++||||+.
T Consensus 300 G~wriwdtd 308 (420)
T KOG2096|consen 300 GKWRIWDTD 308 (420)
T ss_pred CcEEEeecc
Confidence 999999974
No 147
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.87 E-value=4.1e-20 Score=162.86 Aligned_cols=130 Identities=25% Similarity=0.438 Sum_probs=102.7
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc-eeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS-RFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~-~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+.+..|-+|.+.|+.+.|+|.. ..+|||||.|..|+||.+..+- +............+..|.++.|+|...-|+
T Consensus 70 r~i~~l~~H~d~VtDl~FspF~-----D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil 144 (1012)
T KOG1445|consen 70 RDIGILAAHGDQVTDLGFSPFA-----DELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGIL 144 (1012)
T ss_pred cccceeecccceeeccCccccc-----hhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceE
Confidence 4555677999999999999965 3689999999999999986331 111122222222346789999999877677
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~ 148 (352)
..+..|.++|||..++ +.+..+.+|...|.+..|+.||.+|++++.|+.|+|||-+
T Consensus 145 ~s~a~g~v~i~D~stq--k~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPR 200 (1012)
T KOG1445|consen 145 ASGAHGSVYITDISTQ--KTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPR 200 (1012)
T ss_pred EeccCceEEEEEcccC--ceeecccCCchhhhccccccCCceEeeecCCcceEEeCCc
Confidence 6778899999998776 4567788999999999999999999999999999999854
No 148
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=2.3e-19 Score=145.77 Aligned_cols=290 Identities=16% Similarity=0.253 Sum_probs=187.5
Q ss_pred eEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEc
Q 018675 24 VWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103 (352)
Q Consensus 24 V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 103 (352)
-.|+.|++- |.+||.|..||.|-+||..+... ...-..|-.+|.+++||++|+.|+|++.|..+.+||.
T Consensus 26 a~~~~Fs~~------G~~lAvGc~nG~vvI~D~~T~~i-----ar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl 94 (405)
T KOG1273|consen 26 AECCQFSRW------GDYLAVGCANGRVVIYDFDTFRI-----ARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDL 94 (405)
T ss_pred cceEEeccC------cceeeeeccCCcEEEEEccccch-----hhhhhccccceeEEEecCCCCEeeeecCCceeEEEec
Confidence 568899985 68999999999999999987641 1122569999999999999999999999999999999
Q ss_pred cCCceeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEee-c-CccCeeEEEEcCCCCEEEE
Q 018675 104 VGGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQ-G-HAQDVKMVQWHPTMDVLFS 180 (352)
Q Consensus 104 ~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~l~s 180 (352)
..+. +...+. .+++|+.+.|+|- .+.++++-.+..-.+-++... ...++..-. + -.....+..|.+.++++++
T Consensus 95 ~~gs--~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~-~h~~Lp~d~d~dln~sas~~~fdr~g~yIit 170 (405)
T KOG1273|consen 95 LKGS--PLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDP-KHSVLPKDDDGDLNSSASHGVFDRRGKYIIT 170 (405)
T ss_pred cCCC--ceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCC-ceeeccCCCccccccccccccccCCCCEEEE
Confidence 8775 344433 4689999999984 344555545554445554321 111111000 0 0011123357889999999
Q ss_pred EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC-ccccccCCCCcccee
Q 018675 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD-ITRMQSGDGYASWRH 259 (352)
Q Consensus 181 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~ 259 (352)
|...|.+.+++... .+++...... -...|..+.++..|+.|+.-+.|..||.|++. +.........+ +
T Consensus 171 GtsKGkllv~~a~t-----~e~vas~rit---s~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e---~ 239 (405)
T KOG1273|consen 171 GTSKGKLLVYDAET-----LECVASFRIT---SVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVE---P 239 (405)
T ss_pred ecCcceEEEEecch-----heeeeeeeec---hheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcC---h
Confidence 99999999996543 3444443211 13678899999999999999999999999865 11111100000 0
Q ss_pred eEEeec-ccCcceEEEEecCCc-eEEecCC-CCeEEEEEccCCccccCcccceeeecccccC-cceeEEEecCCCcceEE
Q 018675 260 LCTISG-YHDRTIFSVHWSREG-IIASGAA-DDSVQFFVESKDDLIDGPSYKMLLKKEKAHD-MDVNSVQWSPGERRLLA 335 (352)
Q Consensus 260 ~~~~~~-~~~~~i~~~~~~~~~-~~~s~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~sp~~~~~l~ 335 (352)
..++.. .+...=.+++++.+| +++++++ .-.+++|..+.+.+ ++.++|-. ....++.|+|-. .+++
T Consensus 240 ~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsL---------VKILhG~kgE~l~DV~whp~r-p~i~ 309 (405)
T KOG1273|consen 240 EHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSL---------VKILHGTKGEELLDVNWHPVR-PIIA 309 (405)
T ss_pred hHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcce---------eeeecCCchhheeecccccce-eeee
Confidence 011100 011111234556665 5555553 34688897655433 22333443 567889999975 4677
Q ss_pred EecCCCeEEEEeecc
Q 018675 336 SASDDGMIKIWELAN 350 (352)
Q Consensus 336 s~~~Dg~i~iw~~~~ 350 (352)
+- +-|++.||.+..
T Consensus 310 si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 310 SI-ASGVVYIWAVVQ 323 (405)
T ss_pred ec-cCCceEEEEeec
Confidence 66 689999998754
No 149
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.86 E-value=1.6e-19 Score=146.97 Aligned_cols=253 Identities=20% Similarity=0.346 Sum_probs=191.6
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 152 (352)
..+|+|-+|++|++.+|.+-....+.||...+.+ ++...++..|+..|+.|+|+|..+.|++|+.|+...||...++..
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~ 89 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT 89 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence 3689999999999999999999999999988777 788899999999999999999999999999999999999877777
Q ss_pred eEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
.++...+..++..++++.|+|.++.+++||.-+.|.+|+.+. .+.|...+.+. ..+.+.|.+++|+|++-+|++|
T Consensus 90 WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~--ENdWWVsKhik---kPirStv~sldWhpnnVLlaaG 164 (361)
T KOG1523|consen 90 WKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQ--ENDWWVSKHIK---KPIRSTVTSLDWHPNNVLLAAG 164 (361)
T ss_pred eccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEec--ccceehhhhhC---CccccceeeeeccCCcceeccc
Confidence 777777778889999999999999999999999999998764 33453333332 3467899999999999999999
Q ss_pred eCCCcEEEEcCCccccccCCCCccceeeEEe------ecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCc
Q 018675 233 SDDLTIKIWGADITRMQSGDGYASWRHLCTI------SGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGP 305 (352)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~ 305 (352)
+.|+..|+|..-.+..........|...-.| .....+.+..+.|+++| .|+=.+.|..+.+-+......
T Consensus 165 s~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~---- 240 (361)
T KOG1523|consen 165 STDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSE---- 240 (361)
T ss_pred ccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCch----
Confidence 9999999998654443333322333211100 01235568888999876 788889999988875543210
Q ss_pred ccceeeecccccCcceeEEEecCCCcceEEEecCCC
Q 018675 306 SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG 341 (352)
Q Consensus 306 ~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg 341 (352)
..+....-..+..++.|-.+. .++.+|+|.
T Consensus 241 ----~v~~~~~~~lP~ls~~~ise~--~vv~ag~~c 270 (361)
T KOG1523|consen 241 ----RVQSVATAQLPLLSVSWISEN--SVVAAGYDC 270 (361)
T ss_pred ----hccchhhccCCceeeEeecCC--ceeecCCCC
Confidence 111111122667778886543 255677663
No 150
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.85 E-value=3.2e-20 Score=156.97 Aligned_cols=207 Identities=20% Similarity=0.395 Sum_probs=157.5
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCC
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFD 95 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d 95 (352)
..||++.|-++.|+-.- ...|||||.|++|++||+.+++. ...+ ..|.+.|.+++|.|. +..|++|+.|
T Consensus 239 ~~gHTdavl~Ls~n~~~-----~nVLaSgsaD~TV~lWD~~~g~p----~~s~-~~~~k~Vq~l~wh~~~p~~LLsGs~D 308 (463)
T KOG0270|consen 239 ASGHTDAVLALSWNRNF-----RNVLASGSADKTVKLWDVDTGKP----KSSI-THHGKKVQTLEWHPYEPSVLLSGSYD 308 (463)
T ss_pred cccchHHHHHHHhcccc-----ceeEEecCCCceEEEEEcCCCCc----ceeh-hhcCCceeEEEecCCCceEEEecccc
Confidence 45899999999998753 47899999999999999998753 3333 358899999999984 6889999999
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
+++++.|.+... ..-..+ ...+.|..+.|.|... .++++..||+|+-+|++... +++..+++|..+|.++++++.
T Consensus 309 ~~V~l~D~R~~~-~s~~~w-k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~--~~vwt~~AHd~~ISgl~~n~~ 384 (463)
T KOG0270|consen 309 GTVALKDCRDPS-NSGKEW-KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG--KPVWTLKAHDDEISGLSVNIQ 384 (463)
T ss_pred ceEEeeeccCcc-ccCceE-EeccceEEEEecCCCceeEEEecCCceEEeeecCCCC--CceeEEEeccCCcceEEecCC
Confidence 999999986321 111122 2467899999998654 57788899999999998654 678889999999999999875
Q ss_pred C-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEeCCCcEEEEcCC
Q 018675 175 M-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 175 ~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~~dg~i~iwd~~ 244 (352)
- .++++++.|+.+++|++........+ .+.+ -.....|.++.|+-. .++.||..+.+++||+-
T Consensus 385 ~p~~l~t~s~d~~Vklw~~~~~~~~~v~-~~~~------~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~ 449 (463)
T KOG0270|consen 385 TPGLLSTASTDKVVKLWKFDVDSPKSVK-EHSF------KLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIF 449 (463)
T ss_pred CCcceeeccccceEEEEeecCCCCcccc-cccc------cccceeecccCCCcceEEEecCccceEEEeecc
Confidence 4 46889999999999988765432211 1111 113366777788754 46778888899999864
No 151
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.85 E-value=5.8e-19 Score=157.56 Aligned_cols=292 Identities=18% Similarity=0.306 Sum_probs=201.6
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC------C-----CCEEEEEeC
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP------S-----GKLLATASF 94 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~------~-----~~~l~s~~~ 94 (352)
++.|.|. .+.|...-+|.++.+||+....+..++...+ .|..-|..+.--| . ..-++|++.
T Consensus 329 A~~Fdet------~~klscVYndhSlYvWDvrD~~kvgk~~s~l--yHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSs 400 (1080)
T KOG1408|consen 329 ACQFDET------TDKLSCVYNDHSLYVWDVRDVNKVGKCSSML--YHSACIWDVENLPCNVHSPTAACLPRGCFTTCSS 400 (1080)
T ss_pred EEEecCC------CceEEEEEcCceEEEEeccccccccceeeee--eccceeeeeccccccccCcccccCCccceeEecC
Confidence 4567765 3567777899999999998776655544433 2554444443222 1 124789999
Q ss_pred CCcEEEEEccCCceeee-----------------------------------EeeccccCCeeEEEECCCCcEEEEeeCC
Q 018675 95 DATTCIWEDVGGDYECV-----------------------------------ATLEGHENEVKSVSWNASGTLLATCGRD 139 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~-----------------------------------~~~~~h~~~v~~v~~~~~~~~l~s~~~d 139 (352)
|++|++|+........+ ...-...-.+++++.+|+|++|++|..-
T Consensus 401 D~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~ 480 (1080)
T KOG1408|consen 401 DGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRG 480 (1080)
T ss_pred CCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCcc
Confidence 99999998654211000 0000123468999999999999999999
Q ss_pred CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC---CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCccc
Q 018675 140 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP---TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216 (352)
Q Consensus 140 ~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (352)
|+++|++++.-. ......+|..+|.|+.|+- ..++|++++.|+.|.+||+... +. +.+...+|...
T Consensus 481 GnlrVy~Lq~l~---~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn----y~----l~qtld~HSss 549 (1080)
T KOG1408|consen 481 GNLRVYDLQELE---YTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN----YD----LVQTLDGHSSS 549 (1080)
T ss_pred CceEEEEehhhh---hhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc----cc----hhhhhcccccc
Confidence 999999996433 2345678999999999984 3568999999999999987543 22 23344689999
Q ss_pred EEEEEEcCCC--CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEE
Q 018675 217 IWALSFNAKG--DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQF 293 (352)
Q Consensus 217 i~~l~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~ 293 (352)
|+++.|-..| ..+++||.|..|.+-..+. ...+....+...+ ....+++.++..|. ++++++++|..|++
T Consensus 550 ITsvKFa~~gln~~MiscGADksimFr~~qk----~~~g~~f~r~t~t---~~ktTlYDm~Vdp~~k~v~t~cQDrniri 622 (1080)
T KOG1408|consen 550 ITSVKFACNGLNRKMISCGADKSIMFRVNQK----ASSGRLFPRHTQT---LSKTTLYDMAVDPTSKLVVTVCQDRNIRI 622 (1080)
T ss_pred eeEEEEeecCCceEEEeccCchhhheehhcc----ccCceeccccccc---cccceEEEeeeCCCcceEEEEecccceEE
Confidence 9999998877 7799999998775432211 1111111111111 12346778888775 58999999999999
Q ss_pred EEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 294 FVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|......+ ...++..++|.+..-.+...|.+- ++||...|+++.++|+..
T Consensus 623 f~i~sgKq------~k~FKgs~~~eG~lIKv~lDPSgi-Y~atScsdktl~~~Df~s 672 (1080)
T KOG1408|consen 623 FDIESGKQ------VKSFKGSRDHEGDLIKVILDPSGI-YLATSCSDKTLCFVDFVS 672 (1080)
T ss_pred Eeccccce------eeeecccccCCCceEEEEECCCcc-EEEEeecCCceEEEEecc
Confidence 96654322 123344578889999999999885 688888899999999854
No 152
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.85 E-value=3.6e-20 Score=159.00 Aligned_cols=244 Identities=21% Similarity=0.339 Sum_probs=183.6
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccC-CceeeeEeecc--ccCCeeEEEECCCCcEEEEeeCCCcEEEEecC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG-GDYECVATLEG--HENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~-~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~ 148 (352)
.|..-|.++..|...+++.||+. |-|+|||... +...++..+.+ ...-++++...|+|..|++|++-.++.|||+.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA 495 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA 495 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence 46677788889988889888864 7799999753 22234444443 34568999999999999999999999999985
Q ss_pred CCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 149 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
.... .+...+......+..++.+||.+..+++-.||.|.|||+.+. ++.....||+..+.||.++++|..
T Consensus 496 apTp-rikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq---------~~VrqfqGhtDGascIdis~dGtk 565 (705)
T KOG0639|consen 496 APTP-RIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQ---------TLVRQFQGHTDGASCIDISKDGTK 565 (705)
T ss_pred CCCc-chhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccc---------eeeecccCCCCCceeEEecCCCce
Confidence 4321 222333334456677899999999999999999999987653 223345699999999999999999
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
|=|||-|++||.||++..+... ..-....|+++...|.+ -++.|..++.+.+...++.+
T Consensus 566 lWTGGlDntvRcWDlregrqlq-------------qhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~------- 625 (705)
T KOG0639|consen 566 LWTGGLDNTVRCWDLREGRQLQ-------------QHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE------- 625 (705)
T ss_pred eecCCCccceeehhhhhhhhhh-------------hhhhhhhheecccCCCccceeeecccCcEEEEecCCcc-------
Confidence 9999999999999987432210 00124468888888866 67888888888777554321
Q ss_pred ceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 308 KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 308 ~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..++.-|...|.++.|.+.|++ ++|.|.|..+..|.+..
T Consensus 626 ---kyqlhlheScVLSlKFa~cGkw-fvStGkDnlLnawrtPy 664 (705)
T KOG0639|consen 626 ---KYQLHLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPY 664 (705)
T ss_pred ---ceeecccccEEEEEEecccCce-eeecCchhhhhhccCcc
Confidence 2234568899999999999975 78999999999998753
No 153
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.84 E-value=1.8e-18 Score=140.95 Aligned_cols=218 Identities=18% Similarity=0.347 Sum_probs=167.1
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
-.+.|+|.+|+++. ..+|.+-+...|.||..... .+|.....+ ..|...|+.+.|+|..+.|++++.|..-.
T Consensus 9 ~~~pitchAwn~dr------t~iAv~~~~~evhiy~~~~~-~~w~~~htl-s~Hd~~vtgvdWap~snrIvtcs~drnay 80 (361)
T KOG1523|consen 9 LLEPITCHAWNSDR------TQIAVSPNNHEVHIYSMLGA-DLWEPAHTL-SEHDKIVTGVDWAPKSNRIVTCSHDRNAY 80 (361)
T ss_pred ccCceeeeeecCCC------ceEEeccCCceEEEEEecCC-CCceeceeh-hhhCcceeEEeecCCCCceeEccCCCCcc
Confidence 35799999999984 68899889999999987543 334444444 46899999999999999999999999999
Q ss_pred EEEc-cCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE-EEEEeecCccCeeEEEEcCCCCE
Q 018675 100 IWED-VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE-CVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 100 i~~~-~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
+|.. .++++.+..++.-++.++++|.|+|..+.|++||..+.|.||-....+..- ..++-+.+...|++++|+|+.-+
T Consensus 81 Vw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVL 160 (361)
T KOG1523|consen 81 VWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVL 160 (361)
T ss_pred ccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcce
Confidence 9987 667777777888899999999999999999999999999999876544321 11222345567899999999999
Q ss_pred EEEEeCCCcEEEEec--CCCCC----CCcee---EeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 178 LFSCSYDNTIKVWWA--EDTDS----DNWHC---VQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 178 l~s~~~d~~i~iw~~--~~~~~----~~~~~---~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
|++|+.|+..+++.. ...+. ..|.. ...+..+.....+.|..+.|+|+|..|+=.+.|..+.+-|...
T Consensus 161 laaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~ 237 (361)
T KOG1523|consen 161 LAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAG 237 (361)
T ss_pred ecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCC
Confidence 999999999999842 11111 11110 1111111224567899999999999999999999999988643
No 154
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=1.3e-18 Score=141.42 Aligned_cols=251 Identities=18% Similarity=0.281 Sum_probs=165.1
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEE
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 156 (352)
..||.|++-|.+||+|..||.+.|||..+-. ....+.+|..+|++++|+++|..|+|+|.|..+++||+..+...+.+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~--iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR--IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc--hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence 7899999999999999999999999987643 34467899999999999999999999999999999999877643332
Q ss_pred EEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeeccCCCCc-ccEEEEEEcCCCCEEEEEeC
Q 018675 157 SVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNNGHS-STIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~l~~~~~~~~l~s~~~ 234 (352)
. ...+|+.+.|+|.....+.+. .+..-.+-++.+. ...+ +.....+.. ....+..|++.|+|+++|..
T Consensus 104 ---r-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~---~h~~---Lp~d~d~dln~sas~~~fdr~g~yIitGts 173 (405)
T KOG1273|consen 104 ---R-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDP---KHSV---LPKDDDGDLNSSASHGVFDRRGKYIITGTS 173 (405)
T ss_pred ---E-ccCccceeeeccccCCeEEEEEecCCcEEEEecCC---ceee---ccCCCccccccccccccccCCCCEEEEecC
Confidence 2 346899999999654333332 2222233333221 0011 111111111 11112358899999999999
Q ss_pred CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccc--cCcccceee
Q 018675 235 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLI--DGPSYKMLL 311 (352)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~--~~~~~~~~~ 311 (352)
.|.+.+++....+.. ..+.+. ..+.|.++.++..+ .++..++|..|+.|+...-+.. +.....+..
T Consensus 174 KGkllv~~a~t~e~v---------as~rit--s~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K 242 (405)
T KOG1273|consen 174 KGKLLVYDAETLECV---------ASFRIT--SVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHK 242 (405)
T ss_pred cceEEEEecchheee---------eeeeec--hheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHH
Confidence 999999987643221 111111 13457777777765 7889999999999976531111 000000001
Q ss_pred ecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 312 ~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+.........++.||.+|.++.++.+.-..+.||+-..
T Consensus 243 ~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~ 281 (405)
T KOG1273|consen 243 LQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSI 281 (405)
T ss_pred HHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCC
Confidence 112223445778899999987776666677899998643
No 155
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.84 E-value=1.2e-18 Score=142.21 Aligned_cols=281 Identities=21% Similarity=0.332 Sum_probs=184.2
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc-------eee-eeeeeeecceecceEEEEE-------CCCCCEEE
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS-------RFW-NCKAVLEEMHTRTVRSCAW-------SPSGKLLA 90 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~-------~~~-~~~~~~~~~h~~~v~~~~~-------s~~~~~l~ 90 (352)
+..|+|+ +..|++-+.|..+++|++.... ... .....++......|+...| .|+..++|
T Consensus 54 gckWSPD------GSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a 127 (406)
T KOG2919|consen 54 GCKWSPD------GSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFA 127 (406)
T ss_pred cceeCCC------CceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceee
Confidence 4567886 6789999999999999864321 111 1111122222345666655 36678899
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCC---eeEEEECCCCcEEEEeeCCCcEEEEec-CCCCeeEEEEEee----cC
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENE---VKSVSWNASGTLLATCGRDKSVWIWEV-MPGNEFECVSVLQ----GH 162 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~---v~~v~~~~~~~~l~s~~~d~~v~vwd~-~~~~~~~~~~~~~----~h 162 (352)
+.+.|.-|.+||..+++..+......|..+ ..++.|+|||++|++| ..+.|+++|+ +++.......++. +.
T Consensus 128 ~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq 206 (406)
T KOG2919|consen 128 VSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQ 206 (406)
T ss_pred eccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccc
Confidence 999999999999988876655444445544 4589999999999855 5688999998 5554322222221 12
Q ss_pred ccCeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC-CCcEEE
Q 018675 163 AQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKI 240 (352)
Q Consensus 163 ~~~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~-dg~i~i 240 (352)
..-+.+++|+|... +++.++....+-||.-... ..++.+ .+|++.|+.|+|.++|+.|.+|.. |..|..
T Consensus 207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~-----~pl~ll----ggh~gGvThL~~~edGn~lfsGaRk~dkIl~ 277 (406)
T KOG2919|consen 207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGR-----RPLQLL----GGHGGGVTHLQWCEDGNKLFSGARKDDKILC 277 (406)
T ss_pred cceeeeeeccCCCCcceeeecccceeeeEecCCC-----Cceeee----cccCCCeeeEEeccCcCeecccccCCCeEEE
Confidence 44577889999655 8899999999988853221 122222 389999999999999999999875 789999
Q ss_pred EcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCc
Q 018675 241 WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319 (352)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 319 (352)
||++..+..-. ...+.. . ..+.-.-+...+. ..|++|+.+|.|++|+...-. ........|+.
T Consensus 278 WDiR~~~~pv~---~L~rhv----~-~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~g--------n~~sv~~~~sd 341 (406)
T KOG2919|consen 278 WDIRYSRDPVY---ALERHV----G-DTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLG--------NEVSVTGNYSD 341 (406)
T ss_pred Eeehhccchhh---hhhhhc----c-CccceEEEecCCCCceeeccCCCccEEEEecCCCC--------Ccccccccccc
Confidence 99874321100 000000 0 0111112333444 489999999999999765311 11123456888
Q ss_pred ceeEEEecCCCcceEEEecC
Q 018675 320 DVNSVQWSPGERRLLASASD 339 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~ 339 (352)
.++.++++|-= .++||++.
T Consensus 342 ~vNgvslnP~m-pilatssG 360 (406)
T KOG2919|consen 342 TVNGVSLNPIM-PILATSSG 360 (406)
T ss_pred cccceecCccc-ceeeeccC
Confidence 99999999974 57777764
No 156
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=2.7e-20 Score=173.98 Aligned_cols=209 Identities=22% Similarity=0.349 Sum_probs=147.7
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeee-eeeeecceecceEEEEECCCCC-EEEEEeCCCcEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC-KAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTC 99 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~-~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~ 99 (352)
.+-+.++|.+...- . .-++|.|..||.|.+|+...-...... .-.....|++.|..+.|++.+. .||+|+.||.|.
T Consensus 65 ~rF~kL~W~~~g~~-~-~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~ 142 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSH-S-HGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEIL 142 (1049)
T ss_pred ccceeeeecccCCC-c-cceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEE
Confidence 45678899885320 1 136899999999999987542100000 1112346999999999999765 999999999999
Q ss_pred EEEccCCceeeeEee--ccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc--cCeeEEEEcCC
Q 018675 100 IWEDVGGDYECVATL--EGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA--QDVKMVQWHPT 174 (352)
Q Consensus 100 i~~~~~~~~~~~~~~--~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~--~~v~~~~~~~~ 174 (352)
|||...-+. -.+. ....+.|.+++|+.. ...|++++.++.+.|||++..+. +-.+..+. ..+..+.|||+
T Consensus 143 iWDlnn~~t--P~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p---ii~ls~~~~~~~~S~l~WhP~ 217 (1049)
T KOG0307|consen 143 IWDLNKPET--PFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKP---IIKLSDTPGRMHCSVLAWHPD 217 (1049)
T ss_pred EeccCCcCC--CCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCc---ccccccCCCccceeeeeeCCC
Confidence 999865321 1222 234578999999875 44688999999999999986543 22233233 23668899998
Q ss_pred CC-EEEEEeCCC---cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEcCCc
Q 018675 175 MD-VLFSCSYDN---TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 175 ~~-~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~-~~l~s~~~dg~i~iwd~~~ 245 (352)
.. .+++++.|. .|.+||++....- . ....+|+..|.+|.|++.+ ++|+|++.|++|.+|+.+.
T Consensus 218 ~aTql~~As~dd~~PviqlWDlR~assP----~----k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~t 285 (1049)
T KOG0307|consen 218 HATQLLVASGDDSAPVIQLWDLRFASSP----L----KILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNT 285 (1049)
T ss_pred CceeeeeecCCCCCceeEeecccccCCc----h----hhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCC
Confidence 64 566776654 6899988765321 1 1224799999999999976 8899999999999997653
No 157
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=1.2e-19 Score=157.91 Aligned_cols=216 Identities=23% Similarity=0.386 Sum_probs=163.1
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc----eeeeeeeeeecceecceEEEEECCCCCE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS----RFWNCKAVLEEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~----~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 88 (352)
.-.++..|.+.|..+.|+|.. +.|++|+.|+++++|+++... ....+...+ ..|.++|.|+.+.+++..
T Consensus 286 ik~tl~s~~d~ir~l~~~~se------p~lit~sed~~lk~WnLqk~~~s~~~~~epi~tf-raH~gPVl~v~v~~n~~~ 358 (577)
T KOG0642|consen 286 IKFTLRSHDDCIRALAFHPSE------PVLITASEDGTLKLWNLQKAKKSAEKDVEPILTF-RAHEGPVLCVVVPSNGEH 358 (577)
T ss_pred eeeeeecchhhhhhhhcCCCC------CeEEEeccccchhhhhhcccCCccccceeeeEEE-ecccCceEEEEecCCceE
Confidence 334788999999999999974 689999999999999983311 111112222 469999999999999999
Q ss_pred EEEEeCCCcEEEEEccC--------CceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe--eE----
Q 018675 89 LATASFDATTCIWEDVG--------GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE--FE---- 154 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~--------~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~--~~---- 154 (352)
+.+|+-||+|+.|+... ........+.||.+.|+.+++++....|++|+.||+++.|....... +.
T Consensus 359 ~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e 438 (577)
T KOG0642|consen 359 CYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKE 438 (577)
T ss_pred EEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccc
Confidence 99999999999994321 11123456789999999999999999999999999999998643322 00
Q ss_pred -----------------------------------EEEEeec-------CccCeeEEEEcCCCCEEEEEeCCCcEEEEec
Q 018675 155 -----------------------------------CVSVLQG-------HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192 (352)
Q Consensus 155 -----------------------------------~~~~~~~-------h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~ 192 (352)
.+..+.. ....+..+.++|+..+.+++.+|+.|++++.
T Consensus 439 ~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn 518 (577)
T KOG0642|consen 439 HGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDN 518 (577)
T ss_pred cCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccc
Confidence 0000000 0123556778899999999999999999965
Q ss_pred CCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.... +.....+|...+.++++.|+|.+|++++.|+.+++|.++
T Consensus 519 ~~~~---------~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld 561 (577)
T KOG0642|consen 519 KTGK---------ILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLD 561 (577)
T ss_pred cccc---------cchheeeccceecceeecCCCceEEeecCCceeehhhcc
Confidence 4321 122334688899999999999999999999999999764
No 158
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.83 E-value=1.1e-18 Score=153.93 Aligned_cols=255 Identities=20% Similarity=0.288 Sum_probs=174.3
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEEEEe
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLATAS 93 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~ 93 (352)
.....|.+.|..+.|-|-+ ..|+++++|.++++||+........ .+...|...|.+++|.|.. ..+++|+
T Consensus 94 k~~~aH~nAifDl~wapge------~~lVsasGDsT~r~Wdvk~s~l~G~---~~~~GH~~SvkS~cf~~~n~~vF~tGg 164 (720)
T KOG0321|consen 94 KKPLAHKNAIFDLKWAPGE------SLLVSASGDSTIRPWDVKTSRLVGG---RLNLGHTGSVKSECFMPTNPAVFCTGG 164 (720)
T ss_pred cccccccceeEeeccCCCc------eeEEEccCCceeeeeeeccceeecc---eeecccccccchhhhccCCCcceeecc
Confidence 3455799999999999943 5899999999999999987643211 1335699999999999965 5688999
Q ss_pred CCCcEEEEEccCCce------------------ee-------eEeeccccCCeeE---EEECCCCcEEEEeeC-CCcEEE
Q 018675 94 FDATTCIWEDVGGDY------------------EC-------VATLEGHENEVKS---VSWNASGTLLATCGR-DKSVWI 144 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~------------------~~-------~~~~~~h~~~v~~---v~~~~~~~~l~s~~~-d~~v~v 144 (352)
.||.+.|||..-... .+ +.....+...|.+ +.+..|...|+++|. |+.|+|
T Consensus 165 RDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKV 244 (720)
T KOG0321|consen 165 RDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKV 244 (720)
T ss_pred CCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEE
Confidence 999999999642210 00 1112234445555 556678889999988 999999
Q ss_pred EecCCCCe---eEEE--EEeecC---ccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc-
Q 018675 145 WEVMPGNE---FECV--SVLQGH---AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS- 215 (352)
Q Consensus 145 wd~~~~~~---~~~~--~~~~~h---~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~- 215 (352)
||++.... .+.. ..+.-| ...+.++.....|.+|++...|+.|.+|++........ ....++..
T Consensus 245 WDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~-------~~~sg~~~~ 317 (720)
T KOG0321|consen 245 WDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPV-------AEFSGKLNS 317 (720)
T ss_pred EeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCch-------hhccCcccc
Confidence 99964321 1111 112222 23466777777788887777799999998766432211 11112211
Q ss_pred --cEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeE
Q 018675 216 --TIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSV 291 (352)
Q Consensus 216 --~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v 291 (352)
.+. -..+|++.++++|+.|....+|.+...... ..+...|...++.+.|.+.. -+++++.|-.+
T Consensus 318 sf~vk-s~lSpd~~~l~SgSsd~~ayiw~vs~~e~~-----------~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~ 385 (720)
T KOG0321|consen 318 SFYVK-SELSPDDCSLLSGSSDEQAYIWVVSSPEAP-----------PALLLGHTREVTTVRWLPSATTPVATCSDDFRV 385 (720)
T ss_pred eeeee-eecCCCCceEeccCCCcceeeeeecCccCC-----------hhhhhCcceEEEEEeeccccCCCceeeccCcce
Confidence 122 246899999999999999999976532211 11122467778999998864 58888999999
Q ss_pred EEEEcc
Q 018675 292 QFFVES 297 (352)
Q Consensus 292 ~~~~~~ 297 (352)
++|...
T Consensus 386 kiW~l~ 391 (720)
T KOG0321|consen 386 KIWRLS 391 (720)
T ss_pred EEEecc
Confidence 999764
No 159
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.82 E-value=5.3e-19 Score=156.76 Aligned_cols=241 Identities=21% Similarity=0.382 Sum_probs=175.3
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+++|+||++.|+|++|+.+ ++.||||+.|+.|.+|+..- ...++..|...|.|+.|+|-...|++
T Consensus 44 ~llqtLKgHKDtVycVAys~d------GkrFASG~aDK~VI~W~~kl-------EG~LkYSH~D~IQCMsFNP~~h~Las 110 (1081)
T KOG1538|consen 44 TLLQPLKGHKDTVYCVAYAKD------GKRFASGSADKSVIIWTSKL-------EGILKYSHNDAIQCMSFNPITHQLAS 110 (1081)
T ss_pred ccccccccccceEEEEEEccC------CceeccCCCceeEEEecccc-------cceeeeccCCeeeEeecCchHHHhhh
Confidence 456789999999999999987 68999999999999997542 33455679999999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
++-. ..-+|...... +.. ......+.+++|..||++|+-|-.||+|.+-+-. +.+...+....+..++|.+++|
T Consensus 111 CsLs-dFglWS~~qK~---V~K-~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~ 184 (1081)
T KOG1538|consen 111 CSLS-DFGLWSPEQKS---VSK-HKSSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICW 184 (1081)
T ss_pred cchh-hccccChhhhh---HHh-hhhheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEeCCCCCCCCceEEEe
Confidence 8754 34567543211 111 1224578899999999999999999999998643 3333334444567789999999
Q ss_pred cCCC-----CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 172 HPTM-----DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 172 ~~~~-----~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
+|.. ..+++.....++.+|.+.....+ .....+-...++.+.++|+|++.||.|+.+++|.-+..
T Consensus 185 ~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Ig----------k~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~Gv 254 (1081)
T KOG1538|consen 185 NPSSGEGRNDILAVADWGQTLSFYQLSGKQIG----------KDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGV 254 (1081)
T ss_pred cCCCCCCccceEEEEeccceeEEEEecceeec----------ccccCCCCchhheeccCCcEEEEccCCCceEEEeecCe
Confidence 9852 46777788888888765443211 00112234557899999999999999999999953321
Q ss_pred ccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEE
Q 018675 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294 (352)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~ 294 (352)
++ .++ +-.+..|+++...|++ +++.|+.||++..|
T Consensus 255 rL------------GTv-g~~D~WIWtV~~~PNsQ~v~~GCqDGTiACy 290 (1081)
T KOG1538|consen 255 RL------------GTV-GEQDSWIWTVQAKPNSQYVVVGCQDGTIACY 290 (1081)
T ss_pred EE------------eec-cccceeEEEEEEccCCceEEEEEccCeeehh
Confidence 11 111 1134567788778865 78999999999876
No 160
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.82 E-value=8.5e-19 Score=139.22 Aligned_cols=258 Identities=19% Similarity=0.258 Sum_probs=175.9
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
.+...|++|...|+|+.|..+ .+|++|..-|.|++|.+.+... ...++..|...|+.+.--|+ ..+.+
T Consensus 5 dP~fvLRp~~~~v~s~~fqa~-------~rL~sg~~~G~V~~w~lqt~r~----~~~~r~~g~~~it~lq~~p~-d~l~t 72 (323)
T KOG0322|consen 5 DPFFVLRPHSSSVTSVLFQAN-------ERLMSGLSVGIVKMWVLQTERD----LPLIRLFGRLFITNLQSIPN-DSLDT 72 (323)
T ss_pred CCeeEeccccchheehhhccc-------hhhhcccccceEEEEEeecCcc----chhhhhhccceeeceeecCC-cchhh
Confidence 345678899999999999875 4699999999999999987643 22333356778888877776 55677
Q ss_pred EeCCCcEEEEEccCCceeee-----------------------------------------------Eee----ccccCC
Q 018675 92 ASFDATTCIWEDVGGDYECV-----------------------------------------------ATL----EGHENE 120 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~-----------------------------------------------~~~----~~h~~~ 120 (352)
-+.|..+.+|+...+....+ ... .+..+.
T Consensus 73 qgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgs 152 (323)
T KOG0322|consen 73 QGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGS 152 (323)
T ss_pred cCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCc
Confidence 77888888887543211000 000 011234
Q ss_pred eeEEEECC-CCc--EEEEeeCCCcEEEEecCCCCe-------eEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 121 VKSVSWNA-SGT--LLATCGRDKSVWIWEVMPGNE-------FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190 (352)
Q Consensus 121 v~~v~~~~-~~~--~l~s~~~d~~v~vwd~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw 190 (352)
++|..|.- .+. ++++|=++|.+.+||+..+.. .+.+.....|.+++.++.+.+.-..=++|+.+..+.+|
T Consensus 153 vmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~ 232 (323)
T KOG0322|consen 153 VMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMY 232 (323)
T ss_pred eeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceee
Confidence 56666532 222 466777899999999876421 12334456799999999998765555778888888898
Q ss_pred ecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcc
Q 018675 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT 270 (352)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (352)
.+.... .......++.- -...|..+.+.||++.+||+|.|++||||..+..+
T Consensus 233 Sl~~s~-gslq~~~e~~l----knpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~----------------------- 284 (323)
T KOG0322|consen 233 SLNHST-GSLQIRKEITL----KNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLN----------------------- 284 (323)
T ss_pred eecccc-CcccccceEEe----cCCCccceEEccCCcEEeecccCCcEEEEEeccCC-----------------------
Confidence 765431 11111111111 12457778999999999999999999999643110
Q ss_pred eEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 271 IFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 271 i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.+..+..|.+.|++++|+|+.. ++|++|.|++|.+|+++
T Consensus 285 ---------------------------------------pLAVLkyHsagvn~vAfspd~~-lmAaaskD~rISLWkLY 323 (323)
T KOG0322|consen 285 ---------------------------------------PLAVLKYHSAGVNAVAFSPDCE-LMAAASKDARISLWKLY 323 (323)
T ss_pred ---------------------------------------chhhhhhhhcceeEEEeCCCCc-hhhhccCCceEEeeecC
Confidence 0112346889999999999864 79999999999999974
No 161
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=2.5e-18 Score=141.19 Aligned_cols=286 Identities=15% Similarity=0.239 Sum_probs=179.9
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEEEEEeCCCcEEEEEccCCceeeeEeeccc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYECVATLEGH 117 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h 117 (352)
..+|++-..|+|++|++.+++.+-.+ +.+...++.+.|.. .+..+.+|+.||+|++||.+...........++
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~f-----k~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~ 115 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEF-----KGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQ 115 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhhee-----cCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCC
Confidence 45777788999999999886432222 34667777888866 457788999999999999876554555555666
Q ss_pred c-CCeeEEEECCCCcEEEEee----CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEe
Q 018675 118 E-NEVKSVSWNASGTLLATCG----RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWW 191 (352)
Q Consensus 118 ~-~~v~~v~~~~~~~~l~s~~----~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~ 191 (352)
. .+..|++.+-.++.+++|. .|-.|.+||++...+. .......|...|+++.|+|.. ++|++||.||.+.+||
T Consensus 116 ~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~-l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD 194 (376)
T KOG1188|consen 116 SGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL-LRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFD 194 (376)
T ss_pred CCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccch-hhhhhhhccCcceeEEecCCCCCeEEeecccceEEeee
Confidence 5 3566777666677777764 4678999999865431 112345799999999999964 5899999999999999
Q ss_pred cCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEcCCccccccCCCCc------cceeeEEee
Q 018675 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGADITRMQSGDGYA------SWRHLCTIS 264 (352)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~~ 264 (352)
+...+.+. ...+.+ .|...|..+.|..++ +.+.+-+..++..+|+++-.......+.. .|+...
T Consensus 195 ~~~d~EeD-aL~~vi-----N~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~--- 265 (376)
T KOG1188|consen 195 TKKDNEED-ALLHVI-----NHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDN--- 265 (376)
T ss_pred cCCCcchh-hHHHhh-----cccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhh---
Confidence 86642221 111122 367789999998876 45778889999999988643211100000 000000
Q ss_pred cccCcceEEEEecCCceEEecCC-CCeEEEEEcc---CCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCC
Q 018675 265 GYHDRTIFSVHWSREGIIASGAA-DDSVQFFVES---KDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDD 340 (352)
Q Consensus 265 ~~~~~~i~~~~~~~~~~~~s~~~-d~~v~~~~~~---~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~D 340 (352)
...-|-.......+..+.++. -+...++-.. ..... ..+....-+|..-|.++.|...+ .++.|||+|
T Consensus 266 --~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~-----~~~a~l~g~~~eiVR~i~~~~~~-~~l~TGGED 337 (376)
T KOG1188|consen 266 --CDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLL-----TEPAILQGGHEEIVRDILFDVKN-DVLYTGGED 337 (376)
T ss_pred --hhheeecccCCCcceEEEeccccCceeEEEeeeccccccc-----CccccccCCcHHHHHHHhhhccc-ceeeccCCC
Confidence 001111111122233333333 4444443221 11111 11111123477778888887655 478899999
Q ss_pred CeEEEEee
Q 018675 341 GMIKIWEL 348 (352)
Q Consensus 341 g~i~iw~~ 348 (352)
|.+.+|..
T Consensus 338 G~l~~Wk~ 345 (376)
T KOG1188|consen 338 GLLQAWKV 345 (376)
T ss_pred ceEEEEec
Confidence 99999985
No 162
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.81 E-value=1.5e-17 Score=133.94 Aligned_cols=267 Identities=21% Similarity=0.312 Sum_probs=179.9
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeC----CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSG----DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS 85 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~----D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 85 (352)
+.+++.+++.+ -.++++.|+.... ....+|-||- .+.|.|-.+............ ..|..+++.+.|.|+
T Consensus 34 r~~eiy~Y~ap-~~lya~~Ws~~~~---~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~--fd~~YP~tK~~wiPd 107 (364)
T KOG0290|consen 34 RRKEIYTYNAP-WPLYAMNWSVRPD---KKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDAN--FDHPYPVTKLMWIPD 107 (364)
T ss_pred ccceEEEecCC-CceeeeccccCCC---cceeEEEeeeccccCCeeEEEEEccCCCceeccCC--CCCCCCccceEecCC
Confidence 34566677654 4788999985321 1456777763 356666655432221122211 358889999999997
Q ss_pred C-----CEEEEEeCCCcEEEEEccC--CceeeeEee-----ccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCe
Q 018675 86 G-----KLLATASFDATTCIWEDVG--GDYECVATL-----EGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 86 ~-----~~l~s~~~d~~i~i~~~~~--~~~~~~~~~-----~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~ 152 (352)
. ++|||.+ ..+++|.... .+..+...+ ..+..+++++.|+. +.+++.++|-|-+..|||+..+..
T Consensus 108 ~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~ 185 (364)
T KOG0290|consen 108 SKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVS 185 (364)
T ss_pred ccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccc
Confidence 6 3566554 5799997652 222222222 24567899999986 678999999999999999977533
Q ss_pred eEEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEE
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLV 230 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~ 230 (352)
.....-+-+|..+|-.++|...+ ..+++.+.||.++++|++..+.. ++.-+...-..+...|+|++. -+|+|
T Consensus 186 ~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHS------TIIYE~p~~~~pLlRLswnkqDpnymA 259 (364)
T KOG0290|consen 186 GTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHS------TIIYEDPSPSTPLLRLSWNKQDPNYMA 259 (364)
T ss_pred cceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccc------eEEecCCCCCCcceeeccCcCCchHHh
Confidence 33344567899999999998754 47899999999999998764321 111111111346667777764 44566
Q ss_pred EEeCC-CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccce
Q 018675 231 SCSDD-LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 231 s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
+-..| ..|.|-|++.. ..
T Consensus 260 Tf~~dS~~V~iLDiR~P-------------------------------------------------------------~t 278 (364)
T KOG0290|consen 260 TFAMDSNKVVILDIRVP-------------------------------------------------------------CT 278 (364)
T ss_pred hhhcCCceEEEEEecCC-------------------------------------------------------------Cc
Confidence 54433 34555554321 12
Q ss_pred eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.+.++.+|.+.|++++|.|..+..|+|+|+|..+.|||+..+
T Consensus 279 pva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 279 PVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM 320 (364)
T ss_pred ceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccc
Confidence 233567899999999999999889999999999999999765
No 163
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.81 E-value=2.2e-18 Score=147.93 Aligned_cols=265 Identities=18% Similarity=0.287 Sum_probs=187.5
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
.++++.|.... .-..++.+.|+.+++|....... . ...+++.....-.|++......++++|+..+.++|||
T Consensus 36 g~~s~~w~~~n-----~lvvas~~gdk~~~~~~K~g~~~--~-Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwd 107 (673)
T KOG4378|consen 36 GDFSFNWQRRN-----FLVVASMAGDKVMRIKEKDGKTP--E-VPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWD 107 (673)
T ss_pred cceeeeccccc-----eEEEeecCCceeEEEecccCCCC--c-cceeeccccchHHHHhhhhcceeeeccCcCceeeehh
Confidence 48889998752 13455667899999997654311 0 1112222223445555555668999999999999999
Q ss_pred ccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec-CccCeeEEEEcCCCCE-EEE
Q 018675 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG-HAQDVKMVQWHPTMDV-LFS 180 (352)
Q Consensus 103 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~-l~s 180 (352)
.... .+...+++|...|+++.++...++|++++..|-|.+..+..+... ..+.. ..+.++-+.|+|..+. |.+
T Consensus 108 l~~k--l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~t---t~f~~~sgqsvRll~ys~skr~lL~~ 182 (673)
T KOG4378|consen 108 LRAK--LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKT---TTFTIDSGQSVRLLRYSPSKRFLLSI 182 (673)
T ss_pred hHHH--HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccc---cceecCCCCeEEEeecccccceeeEe
Confidence 8743 345567899999999999999999999999999999988654322 22222 2345678999998764 668
Q ss_pred EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEeCCCcEEEEcCCccccccCCCCcccee
Q 018675 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRH 259 (352)
Q Consensus 181 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (352)
++.+|.|.+||+..... +......|..+...++|+|... +|++.|-|..|.+||....+..
T Consensus 183 asd~G~VtlwDv~g~sp--------~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~---------- 244 (673)
T KOG4378|consen 183 ASDKGAVTLWDVQGMSP--------IFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAST---------- 244 (673)
T ss_pred eccCCeEEEEeccCCCc--------ccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccccc----------
Confidence 89999999998765311 1122346889999999999754 6778999999999997633211
Q ss_pred eEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCC
Q 018675 260 LCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329 (352)
Q Consensus 260 ~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~ 329 (352)
.++. -+.++.+++|.+.| +|++|...|.+..|+.... +..+.....|...|++++|-|.
T Consensus 245 -~~l~--y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~--------k~Pv~v~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 245 -DRLT--YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRST--------KAPVAVRSAHDASVTRVAFQPS 304 (673)
T ss_pred -ceee--ecCCcceeeecCCceEEEeecCCceEEEEecccC--------CCCceEeeecccceeEEEeeec
Confidence 1111 23457788999987 6888999999999965431 2233456789999999999874
No 164
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.80 E-value=1.8e-17 Score=135.61 Aligned_cols=271 Identities=23% Similarity=0.369 Sum_probs=179.9
Q ss_pred cccCCccceeeeeee--cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEE
Q 018675 3 FLDDGNYELREIQTL--EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSC 80 (352)
Q Consensus 3 ~~~~~~~~~~~~~~~--~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~ 80 (352)
++.|+.. ..++++ +.|.+.-+-++|+-+.. + ..+++|.+|.-|.|||.|..+... ..-+ ..|..+|+.+
T Consensus 71 c~~d~~i--r~lq~y~D~d~~Esfytcsw~yd~~-~-~~p~la~~G~~GvIrVid~~~~~~----~~~~-~ghG~sINei 141 (385)
T KOG1034|consen 71 CPGDGGI--RLLQSYADEDHDESFYTCSWSYDSN-T-GNPFLAAGGYLGVIRVIDVVSGQC----SKNY-RGHGGSINEI 141 (385)
T ss_pred ECCccce--eeeeeccCCCCCcceEEEEEEecCC-C-CCeeEEeecceeEEEEEecchhhh----ccce-eccCccchhh
Confidence 3444432 344444 24778888889986532 1 247899999999999999876542 1112 3588999999
Q ss_pred EECCCC-CEEEEEeCCCcEEEEEccCCceeeeEe---eccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe---e
Q 018675 81 AWSPSG-KLLATASFDATTCIWEDVGGDYECVAT---LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE---F 153 (352)
Q Consensus 81 ~~s~~~-~~l~s~~~d~~i~i~~~~~~~~~~~~~---~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~---~ 153 (352)
.|.|+. +++++++.|.++++|+..+.. ++.. +.+|.+.|.++.|+++|.+|+++|.|.++++|++..... .
T Consensus 142 k~~p~~~qlvls~SkD~svRlwnI~~~~--Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~l 219 (385)
T KOG1034|consen 142 KFHPDRPQLVLSASKDHSVRLWNIQTDV--CVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKL 219 (385)
T ss_pred hcCCCCCcEEEEecCCceEEEEeccCCe--EEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhh
Confidence 999965 789999999999999988763 4444 478999999999999999999999999999999862110 0
Q ss_pred EEE----------------------EEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeE------ee
Q 018675 154 ECV----------------------SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV------QT 205 (352)
Q Consensus 154 ~~~----------------------~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~------~~ 205 (352)
++. .+-.-|...|-|+.|. ++++++=|-++.|..|....-.. .+..+ .+
T Consensus 220 E~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e-~~~~vkp~es~~T 296 (385)
T KOG1034|consen 220 ELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEE-SIHNVKPPESATT 296 (385)
T ss_pred hhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhh-hhhccCCCcccee
Confidence 000 0111244445555554 46788888899999997632111 11100 11
Q ss_pred eeccCCCCcccEEEEEE--cCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eE
Q 018675 206 ISESNNGHSSTIWALSF--NAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-II 282 (352)
Q Consensus 206 ~~~~~~~h~~~i~~l~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~ 282 (352)
+....+-....|+-+.| +|-++.||.|...|.+.+||++..... ......+ ......|...+++.++ .+
T Consensus 297 i~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~-----~~ttl~~---s~~~~tVRQ~sfS~dgs~l 368 (385)
T KOG1034|consen 297 ILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPP-----KCTTLTH---SKSGSTVRQTSFSRDGSIL 368 (385)
T ss_pred eeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCc-----cCceEEe---ccccceeeeeeecccCcEE
Confidence 11111122345666654 566889999999999999998643221 0001111 1234567788888877 67
Q ss_pred EecCCCCeEEEEE
Q 018675 283 ASGAADDSVQFFV 295 (352)
Q Consensus 283 ~s~~~d~~v~~~~ 295 (352)
+..+.|++|.-|+
T Consensus 369 v~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 369 VLVCDDGTVWRWD 381 (385)
T ss_pred EEEeCCCcEEEEE
Confidence 7888888887774
No 165
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.80 E-value=1.2e-16 Score=146.02 Aligned_cols=310 Identities=15% Similarity=0.198 Sum_probs=206.2
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCC-CceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCc
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA-SSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
.|+..++|.+++|. +.++|++-.||.|.+|.--. ...-.++ ..-.=|...|++++|+++|.+|.+|+..+.
T Consensus 203 ~Htf~~t~~~~spn------~~~~Aa~d~dGrI~vw~d~~~~~~~~t~--t~lHWH~~~V~~L~fS~~G~~LlSGG~E~V 274 (792)
T KOG1963|consen 203 HHTFNITCVALSPN------ERYLAAGDSDGRILVWRDFGSSDDSETC--TLLHWHHDEVNSLSFSSDGAYLLSGGREGV 274 (792)
T ss_pred hhcccceeEEeccc------cceEEEeccCCcEEEEeccccccccccc--eEEEecccccceeEEecCCceEeecccceE
Confidence 47778899999997 46899999999999995322 1111111 111236679999999999999999999999
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec--------CccCeeEE
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG--------HAQDVKMV 169 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--------h~~~v~~~ 169 (352)
+.+|...++..+. +.--.++|..+.++|+++..+....|+.|.+-.+..-.....+..+.. ...-.+.+
T Consensus 275 Lv~Wq~~T~~kqf---LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~ 351 (792)
T KOG1963|consen 275 LVLWQLETGKKQF---LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGV 351 (792)
T ss_pred EEEEeecCCCccc---ccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeE
Confidence 9999988775332 233357899999999999999999999999876532111101111110 12234567
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeee-ccCC---CCcccEEEEEEcCCCCEEEEEeC--------C--
Q 018675 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS-ESNN---GHSSTIWALSFNAKGDKLVSCSD--------D-- 235 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~-~~~~---~h~~~i~~l~~~~~~~~l~s~~~--------d-- 235 (352)
.+.|.-..++-.+.-+.|.+|++...... +..+... ...+ .+.-.+.++..+..|.+++|.-. |
T Consensus 352 ~idpr~~~~vln~~~g~vQ~ydl~td~~i--~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e 429 (792)
T KOG1963|consen 352 SIDPRTNSLVLNGHPGHVQFYDLYTDSTI--YKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGE 429 (792)
T ss_pred EEcCCCCceeecCCCceEEEEecccccee--eeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCce
Confidence 78886666777888999999987653221 1111111 1111 23456778888888999888742 2
Q ss_pred CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC--Cc-eEEecCCCCeEEEEEccCCc-cccCcccceee
Q 018675 236 LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR--EG-IIASGAADDSVQFFVESKDD-LIDGPSYKMLL 311 (352)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~-~~~s~~~d~~v~~~~~~~~~-~~~~~~~~~~~ 311 (352)
-.+|+|..+. ..+.|.....+...|+......++.+ .. +.++++.||.+++|...... .........+.
T Consensus 430 ~~LKFW~~n~-------~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~ 502 (792)
T KOG1963|consen 430 VSLKFWQYNP-------NSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCK 502 (792)
T ss_pred EEEEEEEEcC-------CcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEe
Confidence 3678885431 22455555666666776666555443 23 88999999999999874321 11111112222
Q ss_pred ecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 312 ~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.....|..++++++|+.||. ++++|.|++|.|||..+
T Consensus 503 ~i~sy~k~~i~a~~fs~dGs--lla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 503 AIGSYHKTPITALCFSQDGS--LLAVSFDDTITIWDYDT 539 (792)
T ss_pred eeeccccCcccchhhcCCCc--EEEEecCCEEEEecCCC
Confidence 22234889999999999995 44799999999999865
No 166
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.80 E-value=1.6e-15 Score=137.36 Aligned_cols=296 Identities=31% Similarity=0.549 Sum_probs=205.6
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEE-CCCCC-EEEEEe
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAW-SPSGK-LLATAS 93 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~-s~~~~-~l~s~~ 93 (352)
.+.+|...|.++.+.+. +..++.++.|+.+.+|+....... ...+...+...+..+.+ ++++. .++..+
T Consensus 60 ~~~~~~~~i~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (466)
T COG2319 60 LLRGHEDSITSIAFSPD------GELLLSGSSDGTIKLWDLDNGEKL---IKSLEGLHDSSVSKLALSSPDGNSILLASS 130 (466)
T ss_pred eeeeccceEEEEEECCC------CcEEEEecCCCcEEEEEcCCCcee---EEEEeccCCCceeeEEEECCCcceEEeccC
Confidence 45689999999999986 467888889999999998766411 11111112135666666 88887 555544
Q ss_pred C-CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 94 F-DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 94 ~-d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
. |+.+.+|+... .......+..|...|..+.|+|++..+++++. |+.+++|++... ..+..+.+|...+.+++|
T Consensus 131 ~~d~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~ 206 (466)
T COG2319 131 SLDGTVKLWDLST-PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTG---KPLSTLAGHTDPVSSLAF 206 (466)
T ss_pred CCCccEEEEEecC-CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCC---ceEEeeccCCCceEEEEE
Confidence 4 99999998765 12345667789999999999999998888885 999999998653 345566678999999999
Q ss_pred cCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 172 HPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 172 ~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
+|++. .+++++.|+.+++|+.... ..... ...+|.... ...|+|++.++++++.|+.+++|+......
T Consensus 207 ~~~~~~~~~~~~~d~~i~~wd~~~~-----~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-- 275 (466)
T COG2319 207 SPDGGLLIASGSSDGTIRLWDLSTG-----KLLRS---TLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS-- 275 (466)
T ss_pred cCCcceEEEEecCCCcEEEEECCCC-----cEEee---ecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc--
Confidence 99987 5555599999999965411 12221 233566654 338999998999999999999998753211
Q ss_pred CCCCccceeeEEeecccCcceEEEEecC-CceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCC
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~ 329 (352)
..... ..|...+..+.+.+ ...+++++.|+.+.+|+....... .... ...|...+..+.|.++
T Consensus 276 --------~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~ 339 (466)
T COG2319 276 --------LLRTL-SGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLL-----SSLT--LKGHEGPVSSLSFSPD 339 (466)
T ss_pred --------EEEEE-ecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceE-----EEee--ecccCCceEEEEECCC
Confidence 11111 23567788888888 456777888888899954332111 1110 2467778999999433
Q ss_pred CcceEEEecCCCeEEEEeeccC
Q 018675 330 ERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 330 ~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+..+..++..|+.+++|++...
T Consensus 340 ~~~~~~~~~~d~~~~~~~~~~~ 361 (466)
T COG2319 340 GSLLVSGGSDDGTIRLWDLRTG 361 (466)
T ss_pred CCEEEEeecCCCcEEeeecCCC
Confidence 2344544478899999988653
No 167
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=1.6e-17 Score=141.47 Aligned_cols=244 Identities=15% Similarity=0.264 Sum_probs=170.2
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCe
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~ 152 (352)
.+.|+++.|+|..++|++++.|++++||...+.....++.+.-...+|.+..|.|+|. .+++++....+..||+...+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 3689999999999999999999999999876654444554444467899999999998 899999999999999975543
Q ss_pred eEEEEEeecCc-cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 153 FECVSVLQGHA-QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 153 ~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
..+....++. ..+.....+|++++++..+..|.|.+...... ..+.++. ..+.|..++|+.+++.|++
T Consensus 293 -~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~-----eli~s~K-----ieG~v~~~~fsSdsk~l~~ 361 (514)
T KOG2055|consen 293 -TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTK-----ELITSFK-----IEGVVSDFTFSSDSKELLA 361 (514)
T ss_pred -ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhh-----hhhheee-----eccEEeeEEEecCCcEEEE
Confidence 2344444554 34556678899999999999999988743221 1222221 2467889999999999999
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcce--EEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccc
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI--FSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYK 308 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~ 308 (352)
++.+|.|.+||++.... ...+. .++.+ .+++.+.++ ++|+|+..|.|.+|+... .+....++
T Consensus 362 ~~~~GeV~v~nl~~~~~-----------~~rf~--D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s--~~~s~~Pk 426 (514)
T KOG2055|consen 362 SGGTGEVYVWNLRQNSC-----------LHRFV--DDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS--CFASTNPK 426 (514)
T ss_pred EcCCceEEEEecCCcce-----------EEEEe--ecCccceeeeeecCCCceEEeccCcceEEEeccch--hhccCCCC
Confidence 99999999999874321 11111 11222 344555554 899999999999996432 22222222
Q ss_pred eeeecccccCcceeEEEecCCCcceEEEecC--CCeEEE
Q 018675 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASD--DGMIKI 345 (352)
Q Consensus 309 ~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~--Dg~i~i 345 (352)
. +....--...|+.+.|+||.+ +||.+|. +..+|+
T Consensus 427 P-ik~~dNLtt~Itsl~Fn~d~q-iLAiaS~~~knalrL 463 (514)
T KOG2055|consen 427 P-IKTVDNLTTAITSLQFNHDAQ-ILAIASRVKKNALRL 463 (514)
T ss_pred c-hhhhhhhheeeeeeeeCcchh-hhhhhhhccccceEE
Confidence 2 222333445799999999975 7776664 344555
No 168
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.79 E-value=1.8e-15 Score=131.54 Aligned_cols=269 Identities=11% Similarity=0.114 Sum_probs=166.8
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE-
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT- 91 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s- 91 (352)
.+..+.+|. .+.+++|+|+. ..++++++.|+.+++|+..+++... .+. .+ ..+..+.|+|+++.+++
T Consensus 23 ~~~~~~~~~-~~~~l~~~~dg-----~~l~~~~~~~~~v~~~d~~~~~~~~----~~~-~~-~~~~~~~~~~~g~~l~~~ 90 (300)
T TIGR03866 23 VTRTFPVGQ-RPRGITLSKDG-----KLLYVCASDSDTIQVIDLATGEVIG----TLP-SG-PDPELFALHPNGKILYIA 90 (300)
T ss_pred eEEEEECCC-CCCceEECCCC-----CEEEEEECCCCeEEEEECCCCcEEE----ecc-CC-CCccEEEECCCCCEEEEE
Confidence 345566554 46789999973 1345777889999999987654321 111 12 23567889999987754
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC-cEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK-SVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
++.|+.+.+||..+.. .+..+. +...+.+++|+|++..+++++.++ .+.+||...... ..... .......+.
T Consensus 91 ~~~~~~l~~~d~~~~~--~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~---~~~~~-~~~~~~~~~ 163 (300)
T TIGR03866 91 NEDDNLVTVIDIETRK--VLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEI---VDNVL-VDQRPRFAE 163 (300)
T ss_pred cCCCCeEEEEECCCCe--EEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeE---EEEEE-cCCCccEEE
Confidence 4568999999987643 333343 233468899999999999888765 466778754322 22221 122456789
Q ss_pred EcCCCCEEEEE-eCCCcEEEEecCCCCCCCceeEeeeeccC-CCC--cccEEEEEEcCCCCEEE-EEeCCCcEEEEcCCc
Q 018675 171 WHPTMDVLFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESN-NGH--SSTIWALSFNAKGDKLV-SCSDDLTIKIWGADI 245 (352)
Q Consensus 171 ~~~~~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~-~~h--~~~i~~l~~~~~~~~l~-s~~~dg~i~iwd~~~ 245 (352)
|+|++..++++ ..++.+.+|+..... ....+.... ..+ ......+.|+|++++++ +.+.++.+.+||.+.
T Consensus 164 ~s~dg~~l~~~~~~~~~v~i~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~ 238 (300)
T TIGR03866 164 FTADGKELWVSSEIGGTVSVIDVATRK-----VIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT 238 (300)
T ss_pred ECCCCCEEEEEcCCCCEEEEEEcCcce-----eeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 99999987554 468999999876432 122221100 011 11234688999999854 455677899998753
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEec-CCCCeEEEEEccCCccccCcccceeeecccccCcceeE
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASG-AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 323 (352)
.+. ...+. +...+..+.|++++ .++++ ..++.+.+|+..... .+.... .....+.
T Consensus 239 ~~~-----------~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~---------~~~~~~-~~~~~~~ 295 (300)
T TIGR03866 239 YEV-----------LDYLL--VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK---------VIKSIK-VGRLPWG 295 (300)
T ss_pred CcE-----------EEEEE--eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc---------EEEEEE-cccccce
Confidence 211 11111 23457788999876 55554 568999999765422 112222 2345577
Q ss_pred EEecC
Q 018675 324 VQWSP 328 (352)
Q Consensus 324 ~~~sp 328 (352)
++++|
T Consensus 296 ~~~~~ 300 (300)
T TIGR03866 296 VVVRP 300 (300)
T ss_pred eEeCC
Confidence 77765
No 169
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=7.4e-17 Score=149.92 Aligned_cols=298 Identities=20% Similarity=0.302 Sum_probs=189.5
Q ss_pred EEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEEEEEeCCCcEEEEE
Q 018675 25 WSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLLATASFDATTCIWE 102 (352)
Q Consensus 25 ~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~i~i~~ 102 (352)
..+.|+|- .+.++++..--.+++||.+.++.+..+.. ...-...|+.+.+-. |..++++|+.||.|+||+
T Consensus 1068 k~~~~hpf------~p~i~~ad~r~~i~vwd~e~~~~l~~F~n--~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk 1139 (1387)
T KOG1517|consen 1068 KTLKFHPF------EPQIAAADDRERIRVWDWEKGRLLNGFDN--GAFPDTRVSDLELINEQDDALLLTASSDGVIRIWK 1139 (1387)
T ss_pred ceeeecCC------CceeEEcCCcceEEEEecccCceeccccC--CCCCCCccceeeeecccchhheeeeccCceEEEec
Confidence 34677776 36788877667899999987654322211 112235677777743 456899999999999997
Q ss_pred ccC---CceeeeEeec-------cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 103 DVG---GDYECVATLE-------GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 103 ~~~---~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
.-. ++.+.+.... +-.+.=.-++|.....+|+++|+-+.|++||..... .+.....+....++++.-.
T Consensus 1140 ~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~--~~~diP~~s~t~vTaLS~~ 1217 (1387)
T KOG1517|consen 1140 DYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQ--VVADIPYGSSTLVTALSAD 1217 (1387)
T ss_pred ccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccce--eEeecccCCCccceeeccc
Confidence 532 2223332221 112222456787766677777778999999985432 3333333444556666543
Q ss_pred -CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCccc--EEEEEEcCCCCE-EEEEeCCCcEEEEcCCcccc
Q 018675 173 -PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST--IWALSFNAKGDK-LVSCSDDLTIKIWGADITRM 248 (352)
Q Consensus 173 -~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~--i~~l~~~~~~~~-l~s~~~dg~i~iwd~~~~~~ 248 (352)
+.++++++|-.||.+++||.+-...+...+.. ..|... |..+.+.+.|.- |++|+.||.|++||+++...
T Consensus 1218 ~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~------R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~ 1291 (1387)
T KOG1517|consen 1218 LVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVY------REHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK 1291 (1387)
T ss_pred ccCCceEEEeecCCceEEeecccCCccccceee------cccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcc
Confidence 34688999999999999987765444332222 135554 888999887654 99999999999999986311
Q ss_pred ccCCCCccceeeEEeeccc-CcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 249 QSGDGYASWRHLCTISGYH-DRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
. ... ....... +...+++...+. .++|+|+. +.+++|+..+..+............. .+.+.+++|
T Consensus 1292 e---~~~-----~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~---~gs~scL~F 1359 (1387)
T KOG1517|consen 1292 E---TFL-----TIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQR---IGSVSCLAF 1359 (1387)
T ss_pred c---ccc-----eeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCc---CCCcceeee
Confidence 1 000 0001011 123566666654 46777777 99999988765443322222222222 345799999
Q ss_pred cCCCcceEEEecCCCeEEEEeeccC
Q 018675 327 SPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+|. +-++|.|+.|.+|.||...+.
T Consensus 1360 HP~-~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1360 HPH-RLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred cch-hHhhhhccCCceEEEeecCCc
Confidence 996 457889999999999998764
No 170
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=1.5e-18 Score=151.06 Aligned_cols=290 Identities=23% Similarity=0.289 Sum_probs=188.3
Q ss_pred ccEEEEeeCCCeEEEE--ecCC----------------CceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 39 APVFASCSGDKTVRIW--EQSA----------------SSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w--~~~~----------------~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
.++.++...|...++| ++.. ..+.|.++... ..|...|++++|.|....|++++.|+++.+
T Consensus 242 k~~~~g~d~~l~~~l~~~tla~l~I~~~~dd~~~~k~a~~k~w~ik~tl-~s~~d~ir~l~~~~sep~lit~sed~~lk~ 320 (577)
T KOG0642|consen 242 KSISVGADEDLMSRLGLGTLAGLTIEDEFDDLSDLKKAFTKKWNIKFTL-RSHDDCIRALAFHPSEPVLITASEDGTLKL 320 (577)
T ss_pred CCccccCchHHHHhhcccchhcccccccccchhhhhhhhheecceeeee-ecchhhhhhhhcCCCCCeEEEeccccchhh
Confidence 3566777777888888 3211 02234444433 347788999999999999999999999999
Q ss_pred EEcc------CCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC-------eeEEEEEeecCccCee
Q 018675 101 WEDV------GGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN-------EFECVSVLQGHAQDVK 167 (352)
Q Consensus 101 ~~~~------~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~-------~~~~~~~~~~h~~~v~ 167 (352)
|+.. ....+++.++.+|.++|.|++..++++++++|+-||+|+.|.+.... +......+.||...++
T Consensus 321 WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw 400 (577)
T KOG0642|consen 321 WNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVW 400 (577)
T ss_pred hhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceecccccee
Confidence 9872 23457788999999999999999999999999999999999765221 1123356789999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
.+.+|+....|++++.||+++.|......... + .....|+. -.++++-.....++ ..+.+.+.+++....
T Consensus 401 ~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~------f-~~~~e~g~-Plsvd~~ss~~a~~--~~s~~~~~~~~~~~e 470 (577)
T KOG0642|consen 401 LLALSSTKDRLLSCSSDGTVRLWEPTEESPCT------F-GEPKEHGY-PLSVDRTSSRPAHS--LASFRFGYTSIDDME 470 (577)
T ss_pred eeeecccccceeeecCCceEEeeccCCcCccc------c-CCccccCC-cceEeeccchhHhh--hhhcccccccchhhh
Confidence 99999998899999999999999765543211 1 11112222 23455533321111 122333443332111
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecC-CceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
..+..-......... ......+..+.+.+ ..+.+++..|..+++++.... .++.....|...++++++
T Consensus 471 v~s~~~~~~s~~~~~--~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~---------~~l~s~~a~~~svtslai 539 (577)
T KOG0642|consen 471 VVSDLLIFESSASPG--PRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTG---------KILHSMVAHKDSVTSLAI 539 (577)
T ss_pred hhhheeeccccCCCc--ccccCccceEEecCCCCeeEecccCCceeccccccc---------ccchheeeccceecceee
Confidence 000000000000000 00011122333334 458889999999999865432 233445678889999999
Q ss_pred cCCCcceEEEecCCCeEEEEeeccC
Q 018675 327 SPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
-|++. +|++++.|+.+++|....+
T Consensus 540 ~~ng~-~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 540 DPNGP-YLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred cCCCc-eEEeecCCceeehhhccch
Confidence 99886 6889999999999998543
No 171
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.79 E-value=2e-17 Score=138.36 Aligned_cols=209 Identities=25% Similarity=0.390 Sum_probs=149.3
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeee--eeeeecceecceEEEEECCCC-CEEEEEe
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC--KAVLEEMHTRTVRSCAWSPSG-KLLATAS 93 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~--~~~~~~~h~~~v~~~~~s~~~-~~l~s~~ 93 (352)
..||+..|..++|+|.. ...+||||.|.+|.||.+..+...... ....-..|.+.|..++|+|.. +.|++++
T Consensus 77 v~GHt~~vLDi~w~Pfn-----D~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag 151 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFN-----DCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAG 151 (472)
T ss_pred ccCccccccccccCccC-----CceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhcc
Confidence 46999999999999964 368999999999999997654321111 112225699999999999975 6789999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc-CeeEEEEc
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ-DVKMVQWH 172 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~-~v~~~~~~ 172 (352)
.|+++.+|+..+++. ..++. |..-|.+++|+.+|.+|+|++.|++|+|||.+.+.. +..-.+|.. .-..+.|-
T Consensus 152 ~Dn~v~iWnv~tgea--li~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~---v~e~~~heG~k~~Raifl 225 (472)
T KOG0303|consen 152 SDNTVSIWNVGTGEA--LITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTV---VSEGVAHEGAKPARAIFL 225 (472)
T ss_pred CCceEEEEeccCCce--eeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcE---eeecccccCCCcceeEEe
Confidence 999999999988753 44565 999999999999999999999999999999877653 343455653 22345566
Q ss_pred CCCCEEEEEe----CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCcEEEEcCC
Q 018675 173 PTMDVLFSCS----YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGAD 244 (352)
Q Consensus 173 ~~~~~l~s~~----~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~i~iwd~~ 244 (352)
-++. +++.+ .++.+.+|+..+-... ...+++. ..+.|.-=-|.++...+..+| .|+.||.|.+.
T Consensus 226 ~~g~-i~tTGfsr~seRq~aLwdp~nl~eP--~~~~elD-----tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit 294 (472)
T KOG0303|consen 226 ASGK-IFTTGFSRMSERQIALWDPNNLEEP--IALQELD-----TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEIT 294 (472)
T ss_pred ccCc-eeeeccccccccceeccCcccccCc--ceeEEec-----cCCceEEeeecCCCCEEEEEecCCcceEEEEec
Confidence 6776 44443 5678999965432111 1122221 223444445678777665554 69999999754
No 172
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.78 E-value=9.5e-18 Score=134.95 Aligned_cols=223 Identities=23% Similarity=0.404 Sum_probs=158.3
Q ss_pred ceeeeeeec-CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee-eeeeeeeecceecceEEEEECC--C
Q 018675 10 ELREIQTLE-GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF-WNCKAVLEEMHTRTVRSCAWSP--S 85 (352)
Q Consensus 10 ~~~~~~~~~-gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~-~~~~~~~~~~h~~~v~~~~~s~--~ 85 (352)
.++.+..|. .|.+.|.|+.|.|+. ..+|+- .|..|.+|++....+. ..........|+...++.+|+| +
T Consensus 111 tlE~v~~Ldteavg~i~cvew~Pns------~klasm-~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHd 183 (370)
T KOG1007|consen 111 TLECVASLDTEAVGKINCVEWEPNS------DKLASM-DDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHD 183 (370)
T ss_pred hhhHhhcCCHHHhCceeeEEEcCCC------CeeEEe-ccCceEEEEcccCcchheeecccccccccceecccccCCCCc
Confidence 344555554 577799999999963 556664 4999999998876542 1111111123566788899999 6
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
|..+++ ..|+++..||.++.. +-...-.+|...|+.+.|+|+.+ +|++|++|+.|++||.+..+ .++..+.+|..
T Consensus 184 gnqv~t-t~d~tl~~~D~RT~~-~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk--~pv~el~~HsH 259 (370)
T KOG1007|consen 184 GNQVAT-TSDSTLQFWDLRTMK-KNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK--FPVQELPGHSH 259 (370)
T ss_pred cceEEE-eCCCcEEEEEccchh-hhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC--ccccccCCCce
Confidence 777775 468999999987643 12233357888999999999766 59999999999999987543 45778889999
Q ss_pred CeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCC----------------ceeEeeee----ccCCCCcccEEEEEEc
Q 018675 165 DVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDN----------------WHCVQTIS----ESNNGHSSTIWALSFN 223 (352)
Q Consensus 165 ~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~----------------~~~~~~~~----~~~~~h~~~i~~l~~~ 223 (352)
-++++.|+|.. +++++++.|..+.+|......++. -...+.+. +....|+..|++++|+
T Consensus 260 WvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWS 339 (370)
T KOG1007|consen 260 WVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWS 339 (370)
T ss_pred EEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeec
Confidence 99999999964 567899999999999654322111 00001111 1234689999999998
Q ss_pred CCCC-EEEEEeCCCcEEEEcC
Q 018675 224 AKGD-KLVSCSDDLTIKIWGA 243 (352)
Q Consensus 224 ~~~~-~l~s~~~dg~i~iwd~ 243 (352)
.... .+|+-+-||++.|=.+
T Consensus 340 sadPWiFASLSYDGRviIs~V 360 (370)
T KOG1007|consen 340 SADPWIFASLSYDGRVIISSV 360 (370)
T ss_pred cCCCeeEEEeccCceEEeecC
Confidence 7655 4677889999988754
No 173
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.78 E-value=6.6e-18 Score=144.74 Aligned_cols=316 Identities=19% Similarity=0.266 Sum_probs=211.5
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CC
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GK 87 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~ 87 (352)
++.....|.+|.+.|+.+.|... +..++|+|.|..|.+||+...... ..+...|...|.-..|-|. .+
T Consensus 131 r~~l~~kL~~H~GcVntV~FN~~------Gd~l~SgSDD~~vv~WdW~~~~~~----l~f~SGH~~NvfQaKFiP~s~d~ 200 (559)
T KOG1334|consen 131 RLRLQKKLNKHKGCVNTVHFNQR------GDVLASGSDDLQVVVWDWVSGSPK----LSFESGHCNNVFQAKFIPFSGDR 200 (559)
T ss_pred HhhhhhcccCCCCccceeeeccc------CceeeccCccceEEeehhhccCcc----cccccccccchhhhhccCCCCCc
Confidence 34566788999999999999886 679999999999999999876432 2334557777777778773 46
Q ss_pred EEEEEeCCCcEEEEEccC-CceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc-
Q 018675 88 LLATASFDATTCIWEDVG-GDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ- 164 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~- 164 (352)
-+++++.||.+++=.... +..+-...+..|.++|..++.-|+. .-|.+++.|+.+.=.|++...+.....+-..+..
T Consensus 201 ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~ 280 (559)
T KOG1334|consen 201 TIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKE 280 (559)
T ss_pred CceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCcc
Confidence 789999999998765433 3222245567899999999998854 4699999999999999876554333332233333
Q ss_pred --CeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCC------ceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC
Q 018675 165 --DVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDN------WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235 (352)
Q Consensus 165 --~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~------~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d 235 (352)
....++..|... .+++++.|-.+++||.+..+... ..|...+.. ...-.|+++.|+.++..|.+.-.|
T Consensus 281 ~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~---d~~v~ITgl~Ysh~~sElLaSYnD 357 (559)
T KOG1334|consen 281 RVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVE---DDPVNITGLVYSHDGSELLASYND 357 (559)
T ss_pred ceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccc---cCcccceeEEecCCccceeeeecc
Confidence 345667778655 68999999999999866533221 111112211 223468999999888777777788
Q ss_pred CcEEEEcCCccccccCCCCccceee-EE-eec-ccCcceEEEEecC--CceEEecCCCCeEEEEEccCCccccCccccee
Q 018675 236 LTIKIWGADITRMQSGDGYASWRHL-CT-ISG-YHDRTIFSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYKML 310 (352)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~~-~~-~~~-~~~~~i~~~~~~~--~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~ 310 (352)
-.|.+|.-.+...........-++. .. +.+ .+..+|..+-|-. ..++++|+.=|.|.+|..+...+
T Consensus 358 e~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~ei--------- 428 (559)
T KOG1334|consen 358 EDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEI--------- 428 (559)
T ss_pred cceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHH---------
Confidence 8899995433322111111100011 11 111 1234455554433 46899999999999996554322
Q ss_pred eecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 311 ~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
+....+-..-|+||.=+|--+ +|||.|.|..||||..
T Consensus 429 i~~MegDr~VVNCLEpHP~~P-vLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 429 IRFMEGDRHVVNCLEPHPHLP-VLASSGIDHDVKIWTP 465 (559)
T ss_pred HHHhhcccceEeccCCCCCCc-hhhccCCccceeeecC
Confidence 222222223699999889765 8999999999999976
No 174
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.78 E-value=6.6e-17 Score=143.66 Aligned_cols=274 Identities=20% Similarity=0.317 Sum_probs=188.7
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
.|+.++|.|+. ..|+-+ .+..+-+||...+.... .+ +.|...|++++|+.||+.+|+|+.|..+.+|.
T Consensus 14 ci~d~afkPDG------sqL~lA-Ag~rlliyD~ndG~llq----tL-KgHKDtVycVAys~dGkrFASG~aDK~VI~W~ 81 (1081)
T KOG1538|consen 14 CINDIAFKPDG------TQLILA-AGSRLLVYDTSDGTLLQ----PL-KGHKDTVYCVAYAKDGKRFASGSADKSVIIWT 81 (1081)
T ss_pred chheeEECCCC------ceEEEe-cCCEEEEEeCCCccccc----cc-ccccceEEEEEEccCCceeccCCCceeEEEec
Confidence 89999999984 445544 35678899988775432 22 46999999999999999999999999999996
Q ss_pred ccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe
Q 018675 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 103 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
..- +-+.. ..|+..|.|+.|+|-..+|++|+-.. .-+|...... +... .....+.+.+|..||++++.|-
T Consensus 82 ~kl---EG~Lk-YSH~D~IQCMsFNP~~h~LasCsLsd-FglWS~~qK~----V~K~-kss~R~~~CsWtnDGqylalG~ 151 (1081)
T KOG1538|consen 82 SKL---EGILK-YSHNDAIQCMSFNPITHQLASCSLSD-FGLWSPEQKS----VSKH-KSSSRIICCSWTNDGQYLALGM 151 (1081)
T ss_pred ccc---cceee-eccCCeeeEeecCchHHHhhhcchhh-ccccChhhhh----HHhh-hhheeEEEeeecCCCcEEEEec
Confidence 432 11222 36899999999999989999998643 4478643211 1111 1234688899999999999999
Q ss_pred CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC-----CEEEEEeCCCcEEEEcCCccccccCCCCccc
Q 018675 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-----DKLVSCSDDLTIKIWGADITRMQSGDGYASW 257 (352)
Q Consensus 183 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (352)
.+|+|.|-+-..... .. + +...|-.++|++++|+|.. +.++......++.++.+... +...+.
T Consensus 152 ~nGTIsiRNk~gEek---~~---I-~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~-~Igk~r---- 219 (1081)
T KOG1538|consen 152 FNGTISIRNKNGEEK---VK---I-ERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGK-QIGKDR---- 219 (1081)
T ss_pred cCceEEeecCCCCcc---eE---E-eCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecce-eecccc----
Confidence 999999975333211 11 1 2234567899999999963 45777777778887765421 111000
Q ss_pred eeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEE
Q 018675 258 RHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS 336 (352)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s 336 (352)
.. .-...++.+-++| ++..|+.|+.+.+|...+ ..+.+.......|..++..|+++ .++.
T Consensus 220 -----~L---~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~G----------vrLGTvg~~D~WIWtV~~~PNsQ-~v~~ 280 (1081)
T KOG1538|consen 220 -----AL---NFDPCCISYFTNGEYILLGGSDKQLSLFTRDG----------VRLGTVGEQDSWIWTVQAKPNSQ-YVVV 280 (1081)
T ss_pred -----cC---CCCchhheeccCCcEEEEccCCCceEEEeecC----------eEEeeccccceeEEEEEEccCCc-eEEE
Confidence 00 1112334444444 888999999999985432 12223333567899999999986 5788
Q ss_pred ecCCCeEEEEeec
Q 018675 337 ASDDGMIKIWELA 349 (352)
Q Consensus 337 ~~~Dg~i~iw~~~ 349 (352)
|..||+|--|++.
T Consensus 281 GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 281 GCQDGTIACYNLI 293 (1081)
T ss_pred EEccCeeehhhhH
Confidence 9999999887763
No 175
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.78 E-value=3.8e-17 Score=139.06 Aligned_cols=222 Identities=16% Similarity=0.165 Sum_probs=157.2
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeec-ceecceEEEEECCCCCEEEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE-MHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~ 92 (352)
+.-+.+|...|++|.|+|.. ..++++.|.||++|+=|++.... ...+.. .-......+.|+.+.+.++.+
T Consensus 227 v~~f~~hs~~Vs~l~F~P~n-----~s~i~ssSyDGtiR~~D~~~~i~----e~v~s~~~d~~~fs~~d~~~e~~~vl~~ 297 (498)
T KOG4328|consen 227 VYLFTPHSGPVSGLKFSPAN-----TSQIYSSSYDGTIRLQDFEGNIS----EEVLSLDTDNIWFSSLDFSAESRSVLFG 297 (498)
T ss_pred eEEeccCCccccceEecCCC-----hhheeeeccCceeeeeeecchhh----HHHhhcCccceeeeeccccCCCccEEEe
Confidence 34567899999999999975 46899999999999998875421 111100 123456778898888888888
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeE-EEEEeecCccCeeEEE
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFE-CVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~~h~~~v~~~~ 170 (352)
..=|...+||...+.. ....+.-|...|+.++++|... +|+|||-|+++++||++.-.... +.-....|...|.++.
T Consensus 298 ~~~G~f~~iD~R~~~s-~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAy 376 (498)
T KOG4328|consen 298 DNVGNFNVIDLRTDGS-EYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAY 376 (498)
T ss_pred ecccceEEEEeecCCc-cchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeE
Confidence 8878899999876542 2445566888999999999654 69999999999999986543322 2233446888999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeec--cCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE--SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
|+|++-.|++.+.|..|+||+..--. .......++.. ....|.. .....|.|+..+++.|-.-..|-|+|-+..+
T Consensus 377 FSPs~gtl~TT~~D~~IRv~dss~~s-a~~~p~~~I~Hn~~t~RwlT-~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 377 FSPSGGTLLTTCQDNEIRVFDSSCIS-AKDEPLGTIPHNNRTGRWLT-PFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ 453 (498)
T ss_pred EcCCCCceEeeccCCceEEeeccccc-ccCCccceeeccCccccccc-chhheeCCCccEEEEeccCcceeEEcCCCCE
Confidence 99998889999999999999763000 00011112211 0111222 2345799999999999988889999866544
No 176
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.77 E-value=1.3e-14 Score=131.54 Aligned_cols=293 Identities=34% Similarity=0.589 Sum_probs=201.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeC-CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSG-DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~-D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l 89 (352)
.....+.+|...|.+++|+|+. ..+++++. |+.+++|+....... ..+ ..|...|.+++|+|+++ .+
T Consensus 146 ~~~~~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~v~~~~~~~~~~~~~ 214 (466)
T COG2319 146 KLIRTLEGHSESVTSLAFSPDG------KLLASGSSLDGTIKLWDLRTGKPL----STL-AGHTDPVSSLAFSPDGGLLI 214 (466)
T ss_pred eEEEEEecCcccEEEEEECCCC------CEEEecCCCCCceEEEEcCCCceE----Eee-ccCCCceEEEEEcCCcceEE
Confidence 3445678999999999999973 57888875 999999998763321 112 23788999999999998 56
Q ss_pred EEEeCCCcEEEEEccCCceeeeE-eeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 90 ATASFDATTCIWEDVGGDYECVA-TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
++++.|+.+.+|+...+ .... .+.+|...+ ...|+|++..+++++.|+.+++|++..... ....+.+|...+.+
T Consensus 215 ~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~v~~ 289 (466)
T COG2319 215 ASGSSDGTIRLWDLSTG--KLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS--LLRTLSGHSSSVLS 289 (466)
T ss_pred EEecCCCcEEEEECCCC--cEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc--EEEEEecCCccEEE
Confidence 66699999999976533 2333 577787775 448999998889999999999999875543 22233678889999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCCccc
Q 018675 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITR 247 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~~~~ 247 (352)
+.|.|++..+++++.|+.+.+|+...... ..... ...|...+..+.|.+++..++.+ ..|+.+.+|+.....
T Consensus 290 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 362 (466)
T COG2319 290 VAFSPDGKLLASGSSDGTVRLWDLETGKL-----LSSLT--LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362 (466)
T ss_pred EEECCCCCEEEEeeCCCcEEEEEcCCCce-----EEEee--ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc
Confidence 99999888888899998899996544321 11111 23566678999994332455555 688999999875332
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCCceEEe-cCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIAS-GAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s-~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
. ..... ....+..+.+.+...+.. +..++.+.+|....... ......+...+....+
T Consensus 363 ~-----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 420 (466)
T COG2319 363 P-----------LKTLE--GHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSL---------LRNLDGHTSRVTSLDF 420 (466)
T ss_pred e-----------eEEec--CCceEEEEEECCCCCEEEEecCCCceEEEecccCee---------eeeccCCCCcEEEEEE
Confidence 0 00000 111144555555222333 67888999996643221 1111111167889999
Q ss_pred cCCCcceEEEecCCCeEEEEeecc
Q 018675 327 SPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
++++. .+++++.++.+++|+...
T Consensus 421 ~~~~~-~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 421 SPDGK-SLASGSSDNTIRLWDLKT 443 (466)
T ss_pred CCCCc-EEEEecCCCcEEEEeccC
Confidence 99875 577889999999998753
No 177
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.77 E-value=3.3e-17 Score=137.07 Aligned_cols=209 Identities=22% Similarity=0.415 Sum_probs=144.1
Q ss_pred eeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCC----eeEEEEEeecCccCeeEEEEcCC-CCEEEEEeCCCc
Q 018675 113 TLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGN----EFECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNT 186 (352)
Q Consensus 113 ~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~ 186 (352)
.+.+|.++|..++|+| +.+.|++||+|.+|+||++.... ..+++..+.+|+..|-.++|||. .+.|++++.|+.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 4568999999999999 45679999999999999986543 23456778999999999999997 457889999999
Q ss_pred EEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCC-CCccceeeEEeec
Q 018675 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD-GYASWRHLCTISG 265 (352)
Q Consensus 187 i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 265 (352)
|.+|++..... ..++ .|..-|++++|+.+|.+|++.+.|..|||||.+........ .+..
T Consensus 156 v~iWnv~tgea-----li~l-----~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG--------- 216 (472)
T KOG0303|consen 156 VSIWNVGTGEA-----LITL-----DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEG--------- 216 (472)
T ss_pred EEEEeccCCce-----eeec-----CCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccC---------
Confidence 99998865431 2222 39999999999999999999999999999997654332211 1111
Q ss_pred ccCcceEEEEecCCceEEe-c---CCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCC
Q 018675 266 YHDRTIFSVHWSREGIIAS-G---AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG 341 (352)
Q Consensus 266 ~~~~~i~~~~~~~~~~~~s-~---~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg 341 (352)
......-|-.++.+++ | .++..+.+|+... +. . ....+++..- ..|.===|.||..-+++.|-.|+
T Consensus 217 ---~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~n--l~-e---P~~~~elDtS-nGvl~PFyD~dt~ivYl~GKGD~ 286 (472)
T KOG0303|consen 217 ---AKPARAIFLASGKIFTTGFSRMSERQIALWDPNN--LE-E---PIALQELDTS-NGVLLPFYDPDTSIVYLCGKGDS 286 (472)
T ss_pred ---CCcceeEEeccCceeeeccccccccceeccCccc--cc-C---cceeEEeccC-CceEEeeecCCCCEEEEEecCCc
Confidence 1111222233333332 2 3356677775432 11 1 1112223222 23433336777776777888999
Q ss_pred eEEEEeecc
Q 018675 342 MIKIWELAN 350 (352)
Q Consensus 342 ~i~iw~~~~ 350 (352)
.||.|++.+
T Consensus 287 ~IRYyEit~ 295 (472)
T KOG0303|consen 287 SIRYFEITN 295 (472)
T ss_pred ceEEEEecC
Confidence 999999865
No 178
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.77 E-value=4.9e-17 Score=139.75 Aligned_cols=267 Identities=15% Similarity=0.206 Sum_probs=178.5
Q ss_pred eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcEEEEEccCC--ceeeeEeeccccCCee
Q 018675 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGG--DYECVATLEGHENEVK 122 (352)
Q Consensus 46 s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~--~~~~~~~~~~h~~~v~ 122 (352)
|....++|||...-.. .... .-..-...+.++.|+.... .+++.+.|..+++|..... +...+....+ ..-.
T Consensus 9 S~gd~~kl~D~s~~~~--~~~~-~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~g--d~~~ 83 (673)
T KOG4378|consen 9 STGDKTKLSDFSDLET--KSEY-VHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTG--DNAF 83 (673)
T ss_pred ccCCceEEeecccccC--cccc-ccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeecccc--chHH
Confidence 3445789999764321 1111 1000123478888886553 2345567888999964332 2222222232 2344
Q ss_pred EEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCcee
Q 018675 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHC 202 (352)
Q Consensus 123 ~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~ 202 (352)
|++......++++|+..+.|++||++. ..+.+.+++|...|+++.+.-.+.++++++..|.|.|-.+......
T Consensus 84 Cv~~~s~S~y~~sgG~~~~Vkiwdl~~---kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~t---- 156 (673)
T KOG4378|consen 84 CVACASQSLYEISGGQSGCVKIWDLRA---KLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKT---- 156 (673)
T ss_pred HHhhhhcceeeeccCcCceeeehhhHH---HHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccc----
Confidence 555555557899999999999999963 2355678899999999999999999999999999999865443211
Q ss_pred EeeeeccCCCCcccEEEEEEcCCCCE-EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-
Q 018675 203 VQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG- 280 (352)
Q Consensus 203 ~~~~~~~~~~h~~~i~~l~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 280 (352)
.++. .+.+..|.-|.|+|..++ |.+++.+|.|.+||+... ++...+...|..+...++|+|..
T Consensus 157 -t~f~---~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~-----------sp~~~~~~~HsAP~~gicfspsne 221 (673)
T KOG4378|consen 157 -TTFT---IDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGM-----------SPIFHASEAHSAPCRGICFSPSNE 221 (673)
T ss_pred -ccee---cCCCCeEEEeecccccceeeEeeccCCeEEEEeccCC-----------CcccchhhhccCCcCcceecCCcc
Confidence 1111 123456778999998665 557899999999997532 22222333466666677888754
Q ss_pred -eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 281 -IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 281 -~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+++.+.|+.|.+|+...+.. ...+ .-+.+...++|+++|. +|+.|...|.|.-||++-
T Consensus 222 ~l~vsVG~Dkki~~yD~~s~~s-----~~~l-----~y~~Plstvaf~~~G~-~L~aG~s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 222 ALLVSVGYDKKINIYDIRSQAS-----TDRL-----TYSHPLSTVAFSECGT-YLCAGNSKGELIAYDMRS 281 (673)
T ss_pred ceEEEecccceEEEeecccccc-----ccee-----eecCCcceeeecCCce-EEEeecCCceEEEEeccc
Confidence 899999999999997653221 1111 2344789999999985 688999999999999863
No 179
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.77 E-value=9e-17 Score=129.47 Aligned_cols=216 Identities=17% Similarity=0.300 Sum_probs=152.3
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeee----eecceecceEEEEECC-CCCEEEEEe
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV----LEEMHTRTVRSCAWSP-SGKLLATAS 93 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~----~~~~h~~~v~~~~~s~-~~~~l~s~~ 93 (352)
.|.-.++.+.|.|+..- -..++|||+| ..+|+|.+........+... ....+..++++..|+. +.++|.+.+
T Consensus 94 d~~YP~tK~~wiPd~~g-~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS 170 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKG-VYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS 170 (364)
T ss_pred CCCCCccceEecCCccc-cCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec
Confidence 58889999999997521 1236777753 58999988743211111111 1234567899999986 678899999
Q ss_pred CCCcEEEEEccCC-ceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 94 FDATTCIWEDVGG-DYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 94 ~d~~i~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
-|-+..|||.+.+ .......+-+|..+|..++|...+ +.|+++|.||+++++|++.-.-..++..-.....+...++|
T Consensus 171 iDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLsw 250 (364)
T KOG0290|consen 171 IDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSW 250 (364)
T ss_pred ccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeecc
Confidence 9999999999875 212334566899999999998854 47999999999999999754322222221221345677888
Q ss_pred cCCC-CEEEEEeCC-CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCc
Q 018675 172 HPTM-DVLFSCSYD-NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 172 ~~~~-~~l~s~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~ 245 (352)
.+++ +++++-..| ..|.|.|++.... ....+.+|+..|+.++|.|. ...|.|+|+|..+.+||+..
T Consensus 251 nkqDpnymATf~~dS~~V~iLDiR~P~t--------pva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 251 NKQDPNYMATFAMDSNKVVILDIRVPCT--------PVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred CcCCchHHhhhhcCCceEEEEEecCCCc--------ceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 8754 456665554 4688888765421 11233479999999999996 56789999999999999864
No 180
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.76 E-value=1.3e-14 Score=128.17 Aligned_cols=288 Identities=10% Similarity=0.171 Sum_probs=170.7
Q ss_pred EEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe-CCCcEEEEEcc-CCceeeeEeecccc
Q 018675 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS-FDATTCIWEDV-GGDYECVATLEGHE 118 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~d~~i~i~~~~-~~~~~~~~~~~~h~ 118 (352)
.+++.+.|+.|++|++.+...+ .....+. +......++++|++++|.+++ .++.|.+|+.. .+......... ..
T Consensus 4 ~y~~~~~~~~I~~~~~~~~g~l-~~~~~~~--~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~ 79 (330)
T PRK11028 4 VYIASPESQQIHVWNLNHEGAL-TLLQVVD--VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LP 79 (330)
T ss_pred EEEEcCCCCCEEEEEECCCCce-eeeeEEe--cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CC
Confidence 3455578999999999643221 2222221 234567789999999887664 47888889875 23333333222 23
Q ss_pred CCeeEEEECCCCcEEEEeeC-CCcEEEEecCCCCe-eEEEEEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCC
Q 018675 119 NEVKSVSWNASGTLLATCGR-DKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDT 195 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~-d~~v~vwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~ 195 (352)
+....+.|+|++++|++++. ++.|.+|++..... ...+..+. +......+.++|+++++++++ .++.|.+|++...
T Consensus 80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence 45678999999998887764 78999999853221 12222222 223456788999998876554 5689999987542
Q ss_pred CCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC-CCcEEEEcCCccccccCCCCccceeeEEeecc-----cCc
Q 018675 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIWGADITRMQSGDGYASWRHLCTISGY-----HDR 269 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 269 (352)
..-......... .. .......+.|+|+++++.+... ++.|.+|+++... ...+....+... ...
T Consensus 159 g~l~~~~~~~~~-~~--~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~-------~~~~~~~~~~~~p~~~~~~~ 228 (330)
T PRK11028 159 GHLVAQEPAEVT-TV--EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPH-------GEIECVQTLDMMPADFSDTR 228 (330)
T ss_pred CcccccCCCcee-cC--CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCC-------CCEEEEEEEecCCCcCCCCc
Confidence 110000000000 01 1234567899999999877765 8999999875210 000111111100 111
Q ss_pred ceEEEEecCCc-eEEec-CCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 270 TIFSVHWSREG-IIASG-AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 270 ~i~~~~~~~~~-~~~s~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
....+.++|++ +++++ ..++.+.+|....... . ..++..... ......++|+|+++.++++...+++|.||+
T Consensus 229 ~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~----~-~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~ 302 (330)
T PRK11028 229 WAADIHITPDGRHLYACDRTASLISVFSVSEDGS----V-LSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYE 302 (330)
T ss_pred cceeEEECCCCCEEEEecCCCCeEEEEEEeCCCC----e-EEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEE
Confidence 22346677876 44444 4567899986643211 0 011111111 124557899999998887777799999998
Q ss_pred ec
Q 018675 348 LA 349 (352)
Q Consensus 348 ~~ 349 (352)
+.
T Consensus 303 ~~ 304 (330)
T PRK11028 303 ID 304 (330)
T ss_pred Ec
Confidence 74
No 181
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.76 E-value=3.7e-16 Score=137.23 Aligned_cols=245 Identities=26% Similarity=0.380 Sum_probs=165.4
Q ss_pred eeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcE--EEEeeCCCcEEE
Q 018675 67 AVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL--LATCGRDKSVWI 144 (352)
Q Consensus 67 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~--l~s~~~d~~v~v 144 (352)
..+...|++.|++++..|.|..|++|+.||+++||...++ .|+.++. ..+.|+||+|+|.+.. |+.+-. ..+.+
T Consensus 393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~Tg--Rcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~-~~~~i 468 (733)
T KOG0650|consen 393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATG--RCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVG-ECVLI 468 (733)
T ss_pred eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecc--eEEEEEe-ecceeEEEEecCCCCceeEEEEec-CceEE
Confidence 3445679999999999999999999999999999999887 4555543 4678999999997653 443333 33444
Q ss_pred EecCCC-------------------C--------------ee-EEEEEeecCccCeeEEEEcCCCCEEEEEeCC---CcE
Q 018675 145 WEVMPG-------------------N--------------EF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD---NTI 187 (352)
Q Consensus 145 wd~~~~-------------------~--------------~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i 187 (352)
-+-.-+ . +. .-+...-.|...|+.+.||..|.+|++...+ ..|
T Consensus 469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~V 548 (733)
T KOG0650|consen 469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSV 548 (733)
T ss_pred eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceE
Confidence 321100 0 00 0012233577789999999999999876554 457
Q ss_pred EEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeeccc
Q 018675 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH 267 (352)
Q Consensus 188 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (352)
.|..+.... .+..... -.+.|.++.|+|...+|+.++. ..|+|||+-...+... ... .
T Consensus 549 liHQLSK~~------sQ~PF~k---skG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKk-L~t-----------g 606 (733)
T KOG0650|consen 549 LIHQLSKRK------SQSPFRK---SKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKK-LLT-----------G 606 (733)
T ss_pred EEEeccccc------ccCchhh---cCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHH-Hhc-----------C
Confidence 777543321 1111111 2356889999999999888875 6799999753222100 000 1
Q ss_pred CcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEE
Q 018675 268 DRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346 (352)
Q Consensus 268 ~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw 346 (352)
...+.+++.+++| -++.++.|+.+.+++.... ....++..-|...+++++|++.- .+|+||+.||++.|+
T Consensus 607 ~kwiS~msihp~GDnli~gs~d~k~~WfDldls--------skPyk~lr~H~~avr~Va~H~ry-PLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 607 SKWISSMSIHPNGDNLILGSYDKKMCWFDLDLS--------SKPYKTLRLHEKAVRSVAFHKRY-PLFASGSDDGTVIVF 677 (733)
T ss_pred CeeeeeeeecCCCCeEEEecCCCeeEEEEcccC--------cchhHHhhhhhhhhhhhhhcccc-ceeeeecCCCcEEEE
Confidence 2235567777765 6888999999988865321 11233456789999999999865 589999999999987
No 182
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.75 E-value=6.9e-16 Score=145.60 Aligned_cols=328 Identities=16% Similarity=0.170 Sum_probs=199.2
Q ss_pred cCC-ccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc---eeeeeeeeeecceecceEEE
Q 018675 5 DDG-NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS---RFWNCKAVLEEMHTRTVRSC 80 (352)
Q Consensus 5 ~~~-~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~---~~~~~~~~~~~~h~~~v~~~ 80 (352)
+.| ..+...+..|..|+..|..++.++.. +++|+|||.||+|++|+...-. ...+....+ ..-..++.++
T Consensus 1031 ~~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~-----~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~lty-s~~~sr~~~v 1104 (1431)
T KOG1240|consen 1031 PPGWNPRGILVAHLHEHSSAVIKLAVSSEH-----TSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTY-SPEGSRVEKV 1104 (1431)
T ss_pred CCCCCccceEeehhhhccccccceeecCCC-----CceEEEecCCceEEEeeehhhhcCcceeeeeEEE-eccCCceEEE
Confidence 344 55667788899999999999988764 4799999999999999865321 111222211 1134678899
Q ss_pred EECCCCCEEEEEeCCCcEEEEEccCCce---eeeEe--eccc-cCC-eeEEEECC-CCc-EEEEeeCCCcEEEEecCCCC
Q 018675 81 AWSPSGKLLATASFDATTCIWEDVGGDY---ECVAT--LEGH-ENE-VKSVSWNA-SGT-LLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 81 ~~s~~~~~l~s~~~d~~i~i~~~~~~~~---~~~~~--~~~h-~~~-v~~v~~~~-~~~-~l~s~~~d~~v~vwd~~~~~ 151 (352)
..-+.++.+|.++.||.|.+.+....+. .+.+. ...+ .+. |..-+|.. .+. .++.+..-+.+..||++...
T Consensus 1105 t~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~ 1184 (1431)
T KOG1240|consen 1105 TMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRH 1184 (1431)
T ss_pred EeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhh
Confidence 9999999999999999999987643111 11111 1111 222 33333332 233 67777777889999986432
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC---CE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG---DK 228 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~---~~ 228 (352)
....+ ...-..+.|++++.+|.+..++.|...|.+.+||++.... +.. -..++..+|..+..+|-. ..
T Consensus 1185 ~~w~l-k~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~-----i~s---w~~P~~~~i~~v~~~~~~~~~S~ 1255 (1431)
T KOG1240|consen 1185 DAWRL-KNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVP-----ILS---WEHPARAPIRHVWLCPTYPQESV 1255 (1431)
T ss_pred hHHhh-hcCccccceeEEEecCCceEEEEecCCceEEEEEeecCce-----eec---ccCcccCCcceEEeeccCCCCce
Confidence 21111 1112235689999999999999999999999999876421 111 112345778888877743 34
Q ss_pred EEEE-e-CCCcEEEEcCCcccccc----CCCCccceeeEEe----ecccCcceEEEEecCCceEEecCCCCeEEEEEccC
Q 018675 229 LVSC-S-DDLTIKIWGADITRMQS----GDGYASWRHLCTI----SGYHDRTIFSVHWSREGIIASGAADDSVQFFVESK 298 (352)
Q Consensus 229 l~s~-~-~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~ 298 (352)
.+++ + ..+.|.+|++.....+. ..+.......... .......+.+.-...++.+.+|+.|..|+.|+...
T Consensus 1256 ~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1256 SVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred EEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence 4444 3 57889999875432110 0000000000000 00111223344445577899999999999997542
Q ss_pred Cccc-----------------------------c---------Ccc--c-cee-e-----ecccccCcceeEEEecCCCc
Q 018675 299 DDLI-----------------------------D---------GPS--Y-KML-L-----KKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 299 ~~~~-----------------------------~---------~~~--~-~~~-~-----~~~~~h~~~i~~~~~sp~~~ 331 (352)
-... + ... . ... . .....|-..|+++++....+
T Consensus 1336 p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q 1415 (1431)
T KOG1240|consen 1336 PEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQ 1415 (1431)
T ss_pred cccccccccCccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCc
Confidence 1000 0 000 0 000 0 01135778999999877667
Q ss_pred ceEEEecCCCeEEEEe
Q 018675 332 RLLASASDDGMIKIWE 347 (352)
Q Consensus 332 ~~l~s~~~Dg~i~iw~ 347 (352)
.+|++++.||.|+||.
T Consensus 1416 ~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1416 PLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred cEEEEecCCCeeeecC
Confidence 7899999999999995
No 183
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.75 E-value=5.2e-18 Score=158.93 Aligned_cols=212 Identities=17% Similarity=0.369 Sum_probs=161.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~ 90 (352)
..+.++..|++.|.+++|+|.. +.+||+|++||.|.|||+.....-.... ...-...|.+++|+-. ..+|+
T Consensus 107 ~~la~~~~h~G~V~gLDfN~~q-----~nlLASGa~~geI~iWDlnn~~tP~~~~---~~~~~~eI~~lsWNrkvqhILA 178 (1049)
T KOG0307|consen 107 EVLATKSKHTGPVLGLDFNPFQ-----GNLLASGADDGEILIWDLNKPETPFTPG---SQAPPSEIKCLSWNRKVSHILA 178 (1049)
T ss_pred HHHhhhcccCCceeeeeccccC-----CceeeccCCCCcEEEeccCCcCCCCCCC---CCCCcccceEeccchhhhHHhh
Confidence 4455677899999999999986 4699999999999999987644322221 1123467999999864 56789
Q ss_pred EEeCCCcEEEEEccCCceeeeEeecccc--CCeeEEEECCCCc-EEEEeeCCC---cEEEEecCCCCeeEEEEEeecCcc
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHE--NEVKSVSWNASGT-LLATCGRDK---SVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~--~~v~~v~~~~~~~-~l~s~~~d~---~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
+++.+|.+.|||.+.. +++..+..+. ..+..+.|+|+.. .++++++|. .|.+||++... .++.++.+|..
T Consensus 179 S~s~sg~~~iWDlr~~--~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as--sP~k~~~~H~~ 254 (1049)
T KOG0307|consen 179 SGSPSGRAVIWDLRKK--KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS--SPLKILEGHQR 254 (1049)
T ss_pred ccCCCCCceeccccCC--CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC--Cchhhhccccc
Confidence 9999999999998765 3344444443 3477899999764 577776654 78899987543 34566789999
Q ss_pred CeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEeCCCcEEEEc
Q 018675 165 DVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIKIWG 242 (352)
Q Consensus 165 ~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~~dg~i~iwd 242 (352)
.|.++.|.+.+ .+|++++.|+.|.+|+.+.. ..+..+ ...+++++.+.|+|... .++..+-||.|-|+.
T Consensus 255 GilslsWc~~D~~lllSsgkD~~ii~wN~~tg-----Evl~~~----p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~s 325 (1049)
T KOG0307|consen 255 GILSLSWCPQDPRLLLSSGKDNRIICWNPNTG-----EVLGEL----PAQGNWCFDVQWCPRNPSVMAAASFDGKISIYS 325 (1049)
T ss_pred ceeeeccCCCCchhhhcccCCCCeeEecCCCc-----eEeeec----CCCCcceeeeeecCCCcchhhhheeccceeeee
Confidence 99999999976 78999999999999976543 222223 24568999999999876 677888999999998
Q ss_pred CC
Q 018675 243 AD 244 (352)
Q Consensus 243 ~~ 244 (352)
+.
T Consensus 326 l~ 327 (1049)
T KOG0307|consen 326 LQ 327 (1049)
T ss_pred ee
Confidence 65
No 184
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.75 E-value=4.2e-17 Score=141.85 Aligned_cols=223 Identities=16% Similarity=0.230 Sum_probs=156.9
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l 89 (352)
....+|+||++.|+|+.|+.+ |.+|+|||.|-.+.|||....+ ....+...|...|.++.|-| +.+++
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~d------G~lL~SGSDD~r~ivWd~~~~K----llhsI~TgHtaNIFsvKFvP~tnnriv 110 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNAD------GELLASGSDDTRLIVWDPFEYK----LLHSISTGHTANIFSVKFVPYTNNRIV 110 (758)
T ss_pred chhhhhccccceecceeecCC------CCEEeecCCcceEEeecchhcc----eeeeeecccccceeEEeeeccCCCeEE
Confidence 445678999999999999987 6899999999999999986443 33445567999999999988 56789
Q ss_pred EEEeCCCcEEEEEccCC--------ceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEE----
Q 018675 90 ATASFDATTCIWEDVGG--------DYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECV---- 156 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~--------~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~---- 156 (352)
++|+.|..|+++|.... ..+...-..+|...|..++-.|++ +.|-++++||+++-+|++......+-
T Consensus 111 ~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~ 190 (758)
T KOG1310|consen 111 LSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCP 190 (758)
T ss_pred EeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCcccccc
Confidence 99999999999997531 223344567899999999999987 67999999999999999753211100
Q ss_pred ---EEeecCccCeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCC---CCCce----------eEeeeec----cCCC-Cc
Q 018675 157 ---SVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTD---SDNWH----------CVQTISE----SNNG-HS 214 (352)
Q Consensus 157 ---~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~---~~~~~----------~~~~~~~----~~~~-h~ 214 (352)
..+...--...+++.+|... +|++|+.|...++||.+... ...+. |..-+.. ...+ ..
T Consensus 191 ~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~ 270 (758)
T KOG1310|consen 191 SILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLD 270 (758)
T ss_pred HHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccc
Confidence 00111112466889999754 78899999999999843210 01110 1110000 0001 01
Q ss_pred ---ccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 215 ---STIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 215 ---~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
..++-+.|+|+|..|+..-....|.+||++
T Consensus 271 ~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn 303 (758)
T KOG1310|consen 271 RYITCCTYVTFNPNGTELLVSWGGEHVYLFDVN 303 (758)
T ss_pred cceeeeEEEEECCCCcEEEEeeCCeEEEEEeec
Confidence 125567899999887776666789999875
No 185
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=1e-16 Score=131.88 Aligned_cols=270 Identities=15% Similarity=0.240 Sum_probs=173.6
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeeccee-cceEEEEECCCCCEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT-RTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s 91 (352)
.+..+++|...++.+.|...+. +..+.+|+.||+||+||+....+..... ...|. .+-.+++..-.++++++
T Consensus 62 ~l~~fk~~~~~~N~vrf~~~ds----~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~---~~~~~~~~f~~ld~nck~~ii~~ 134 (376)
T KOG1188|consen 62 LLEEFKGPPATTNGVRFISCDS----PHGVISCSSDGTVRLWDIRSQAESARIS---WTQQSGTPFICLDLNCKKNIIAC 134 (376)
T ss_pred hhheecCCCCcccceEEecCCC----CCeeEEeccCCeEEEEEeecchhhhhee---ccCCCCCcceEeeccCcCCeEEe
Confidence 4567889999999999977542 4679999999999999987654322211 12233 45667776667788888
Q ss_pred Ee----CCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 92 AS----FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 92 ~~----~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
|. .|-.+.+||.+..+.....-...|...|++++|+| +.++|++||-||.|.++|+...+.-..+.....|...|
T Consensus 135 GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI 214 (376)
T KOG1188|consen 135 GTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSI 214 (376)
T ss_pred ccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhccccee
Confidence 75 35578999987654323344578999999999999 56799999999999999986543222222222355678
Q ss_pred eEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeec----cCCCCcccEEEEEEcCCCCEEEEEeC-CCcEEE
Q 018675 167 KMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE----SNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKI 240 (352)
Q Consensus 167 ~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~----~~~~h~~~i~~l~~~~~~~~l~s~~~-dg~i~i 240 (352)
.++.|+..+ +.+.+-+.+....+|++++.+...+.....+.. .......-|.... ..+...++.++. -|...+
T Consensus 215 ~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~-~~~~~~~~l~g~~~n~~~~ 293 (376)
T KOG1188|consen 215 HLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHS-PGDKDTCALAGTDSNKGTI 293 (376)
T ss_pred eeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeeccc-CCCcceEEEeccccCceeE
Confidence 899998765 457888899999999987765332211110100 0011112222211 123445554444 677777
Q ss_pred EcCCccccccCCCCccceeeEEeecccCcceEEEEecC-CceEEecCCCCeEEEEE
Q 018675 241 WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFV 295 (352)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~v~~~~ 295 (352)
+-+.... +. ........+.+.|...+.++.|.. +.++.+|+.||.+.+|.
T Consensus 294 ~~~~~~~--s~---~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk 344 (376)
T KOG1188|consen 294 FPLVDTS--SG---SLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK 344 (376)
T ss_pred EEeeecc--cc---cccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence 7443111 10 111234455556677777776665 45899999999999996
No 186
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.73 E-value=6.5e-16 Score=126.34 Aligned_cols=212 Identities=19% Similarity=0.327 Sum_probs=146.1
Q ss_pred cceEEEEEccCC-CCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceec---ceEEEEECCCCCEEEEEeCCCc
Q 018675 22 DRVWSLAWKPTA-GVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR---TVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 22 ~~V~~i~~~p~~-~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
+.|+.-+|-|.. ..+|...++|+.+.|.-|.+||.-+++. ++.... ..|.. ...+++|+|||..|.. +..+.
T Consensus 105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~l--raSy~~-ydh~de~taAhsL~Fs~DGeqlfa-Gykrc 180 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKL--RASYRA-YDHQDEYTAAHSLQFSPDGEQLFA-GYKRC 180 (406)
T ss_pred CEEEEEEeeeccccCCCccceeeeccccCceeeeecccccc--ccchhh-hhhHHhhhhheeEEecCCCCeEee-cccce
Confidence 577888886533 2355568899999999999999877642 111111 12322 3468999999999875 57789
Q ss_pred EEEEEc-cCCceeeeEeec-----cccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 98 TCIWED-VGGDYECVATLE-----GHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 98 i~i~~~-~~~~~~~~~~~~-----~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
|+++|. +.+......... +..+-+.|++|+|.. ..++.++...++-++.-... .++..+.+|...|+.++
T Consensus 181 irvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~---~pl~llggh~gGvThL~ 257 (406)
T KOG2919|consen 181 IRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGR---RPLQLLGGHGGGVTHLQ 257 (406)
T ss_pred EEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCC---CceeeecccCCCeeeEE
Confidence 999997 334332222222 235678899999954 47888888888877764333 34566779999999999
Q ss_pred EcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 171 WHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 171 ~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
|.++++.|++|+. |..|..||++....- +..+..........| -.+..|+++.|++|+.||.|++||++.
T Consensus 258 ~~edGn~lfsGaRk~dkIl~WDiR~~~~p----v~~L~rhv~~TNQRI-~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 258 WCEDGNKLFSGARKDDKILCWDIRYSRDP----VYALERHVGDTNQRI-LFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred eccCcCeecccccCCCeEEEEeehhccch----hhhhhhhccCccceE-EEecCCCCceeeccCCCccEEEEecCC
Confidence 9999999999886 778999998764321 111211110011223 245578999999999999999999763
No 187
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.73 E-value=3.1e-15 Score=136.28 Aligned_cols=277 Identities=19% Similarity=0.288 Sum_probs=178.7
Q ss_pred CeEEEEecCCCceeeeeeeeeecceecceEEEEECC-CCCEEEEEeCCCcEEEEEccCCceee----eEeeccccCCeeE
Q 018675 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYEC----VATLEGHENEVKS 123 (352)
Q Consensus 49 ~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~i~~~~~~~~~~----~~~~~~h~~~v~~ 123 (352)
+.+.+|++..+. .+...+ .-...|+++.|+| +..+++.|..+|.|.+||...+...+ -.....|..++..
T Consensus 222 ~~~~vW~~~~p~---~Pe~~~--~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~ 296 (555)
T KOG1587|consen 222 GVLLVWSLKNPN---TPELVL--ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTA 296 (555)
T ss_pred ceEEEEecCCCC---CceEEE--ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEE
Confidence 478899987652 122222 2357899999999 55778888899999999976543321 1223578899999
Q ss_pred EEECCC--CcEEEEeeCCCcEEEEecCCCCe-eE--EEEEee------cCccCeeEEEEcCCC-CEEEEEeCCCcEEEEe
Q 018675 124 VSWNAS--GTLLATCGRDKSVWIWEVMPGNE-FE--CVSVLQ------GHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWW 191 (352)
Q Consensus 124 v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~-~~--~~~~~~------~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~ 191 (352)
+.|-.+ +.-|++++.||+|..|+++.-.. .+ +..... .-...++++.|.|.. ..++.|+++|.|.--+
T Consensus 297 vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~ 376 (555)
T KOG1587|consen 297 VVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGC 376 (555)
T ss_pred EEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEe
Confidence 999543 34599999999999998742211 00 000001 122357889998864 4688999999886632
Q ss_pred cCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcce
Q 018675 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271 (352)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 271 (352)
-.+..... ............|..+|.++.++|=+..++..+.|-+++||+..... .++..+ ..+...+
T Consensus 377 r~g~~~~~-~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~----------~Pl~~~-~~~~~~v 444 (555)
T KOG1587|consen 377 RKGYTPAP-EVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA----------SPLLSL-DSSPDYV 444 (555)
T ss_pred ccCCcccc-cccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCC----------Ccchhh-hhcccee
Confidence 11111100 01111122334688999999999977655544449999999754110 011111 1123348
Q ss_pred EEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 272 FSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 272 ~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+.++|+|-. .++++..+|.+.+|+...... .. +.+...+....+.+.|++.++ +|+.|.+.|.+++|++.
T Consensus 445 ~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~-----~P--v~s~~~~~~~l~~~~~s~~g~-~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 445 TDVAWSPTRPAVFATVDGDGNLDIWDLLQDDE-----EP--VLSQKVCSPALTRVRWSPNGK-LLAVGDANGTTHILKLS 516 (555)
T ss_pred eeeEEcCcCceEEEEEcCCCceehhhhhcccc-----CC--cccccccccccceeecCCCCc-EEEEecCCCcEEEEEcC
Confidence 889999964 899999999999996543221 11 122223366778888888775 78999999999999985
Q ss_pred c
Q 018675 350 N 350 (352)
Q Consensus 350 ~ 350 (352)
.
T Consensus 517 ~ 517 (555)
T KOG1587|consen 517 E 517 (555)
T ss_pred c
Confidence 3
No 188
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.73 E-value=3.8e-16 Score=128.70 Aligned_cols=224 Identities=20% Similarity=0.385 Sum_probs=164.4
Q ss_pred cceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCE
Q 018675 9 YELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 9 ~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 88 (352)
++...+..++||.+.|+....-|.. +-+++.+.|.++|+|-.....+.|... ......++++.++.++.+.
T Consensus 12 ~kp~ll~~~eG~~d~vn~~~l~~~e------~gv~~~s~drtvrv~lkrds~q~wpsI---~~~mP~~~~~~~y~~e~~~ 82 (404)
T KOG1409|consen 12 KKPELLSKIEGSQDDVNAAILIPKE------EGVISVSEDRTVRVWLKRDSGQYWPSI---YHYMPSPCSAMEYVSESRR 82 (404)
T ss_pred cchhhhhhhcCchhhhhhheeccCC------CCeEEccccceeeeEEeccccccCchh---hhhCCCCceEeeeeccceE
Confidence 4556778899999999988877753 468999999999999655544444322 2234678899999999999
Q ss_pred EEEEeCCCcEEEEEcc--CCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC---------------
Q 018675 89 LATASFDATTCIWEDV--GGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN--------------- 151 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~--~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~--------------- 151 (352)
|..|-..|++.-+... -.+.........|...|..+.|+...+++++.+.|..+.-.-...+.
T Consensus 83 L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~ 162 (404)
T KOG1409|consen 83 LYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQ 162 (404)
T ss_pred EEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCc
Confidence 9999988888766431 11222233445788899999998888888888888765422111110
Q ss_pred -----------------------eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeec
Q 018675 152 -----------------------EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208 (352)
Q Consensus 152 -----------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 208 (352)
....+..+.+|...+.++.|.|....|++|..|..+.+||+...... .-
T Consensus 163 ~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~--------~~ 234 (404)
T KOG1409|consen 163 FDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGT--------AY 234 (404)
T ss_pred eeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcce--------ee
Confidence 11234557789999999999999999999999999999998764321 11
Q ss_pred cCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc
Q 018675 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249 (352)
Q Consensus 209 ~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (352)
...+|...|..+..-+.-..+++++.||.|.+|+.+..+..
T Consensus 235 el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~e 275 (404)
T KOG1409|consen 235 ELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRVE 275 (404)
T ss_pred eeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceeec
Confidence 23478888888888777788999999999999998754433
No 189
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.73 E-value=2.4e-18 Score=156.00 Aligned_cols=122 Identities=24% Similarity=0.482 Sum_probs=105.0
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
+++.+..|.||...|+|+.|..+ +-+++||++|..++||..++......+ ..|.+.|+.++.+.+..++
T Consensus 179 kmk~ikrLlgH~naVyca~fDrt------g~~Iitgsdd~lvKiwS~et~~~lAs~-----rGhs~ditdlavs~~n~~i 247 (1113)
T KOG0644|consen 179 KMKNIKRLLGHRNAVYCAIFDRT------GRYIITGSDDRLVKIWSMETARCLASC-----RGHSGDITDLAVSSNNTMI 247 (1113)
T ss_pred HHHHHHHHHhhhhheeeeeeccc------cceEeecCccceeeeeeccchhhhccC-----CCCccccchhccchhhhhh
Confidence 34566778899999999999765 679999999999999998776544333 4588999999999999999
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~ 148 (352)
++++.|..|++|....+ .++..+.+|+++|++++|+|-. +.+.||++++||.+
T Consensus 248 aaaS~D~vIrvWrl~~~--~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 248 AAASNDKVIRVWRLPDG--APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred hhcccCceEEEEecCCC--chHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 99999999999988776 4678889999999999999953 78999999999975
No 190
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.72 E-value=3.8e-16 Score=135.59 Aligned_cols=266 Identities=18% Similarity=0.302 Sum_probs=165.8
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce---eeeeeeee-ecceecceEEEEECCCCCEEEEEeC
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR---FWNCKAVL-EEMHTRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~---~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~ 94 (352)
-|+..|-|+.|..+. -++..++|..+.+|.--+... ...+...+ ...|..+- +..=-.....++.++.
T Consensus 12 r~~e~vc~v~w~~~e-------ei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~r-s~~~g~~~d~~~i~s~ 83 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNE-------EIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGR-SSGGGKGSDTLLICSN 83 (737)
T ss_pred ccceeEEeecccccc-------eEEEeccCceEEEeecccchhhhhhhCCcccCCcccccccc-ccCCCCCcceEEEEcC
Confidence 477888899998753 355556777777774322211 11111111 11221110 0000012346888899
Q ss_pred CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
||.+.+.... + ..-..+..|.+++.+-.|+|+|.-|+++++||.|++|.-. + ....++.....+|.|++|.|+
T Consensus 84 DGkf~il~k~-~--rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-G---MLRStl~Q~~~~v~c~~W~p~ 156 (737)
T KOG1524|consen 84 DGRFVILNKS-A--RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-G---MLRSTVVQNEESIRCARWAPN 156 (737)
T ss_pred CceEEEeccc-c--hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-c---hHHHHHhhcCceeEEEEECCC
Confidence 9999887532 2 2223467899999999999999999999999999999842 2 112233334568999999998
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCC
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGY 254 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 254 (352)
.+.++-+.. +.+.|=-+. ... + + + .-.+|.+-|.+++|++..+.+++||+|-+.++||.....+.
T Consensus 157 S~~vl~c~g-~h~~IKpL~-~n~---k-~--i--~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf----- 221 (737)
T KOG1524|consen 157 SNSIVFCQG-GHISIKPLA-ANS---K-I--I--RWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLF----- 221 (737)
T ss_pred CCceEEecC-CeEEEeecc-ccc---c-e--e--EEeccCcEEEEeecCccccceeecCCceeEEeecccCcccc-----
Confidence 765443322 223221110 000 0 1 1 12379999999999999999999999999999986422211
Q ss_pred ccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceE
Q 018675 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLL 334 (352)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l 334 (352)
-+..|+-+|++++|.|+..++.++.+ +.+ ......+.|..++|||||.+ +
T Consensus 222 --------~S~~~ey~ITSva~npd~~~~v~S~n-t~R--------------------~~~p~~GSifnlsWS~DGTQ-~ 271 (737)
T KOG1524|consen 222 --------TSAAEEYAITSVAFNPEKDYLLWSYN-TAR--------------------FSSPRVGSIFNLSWSADGTQ-A 271 (737)
T ss_pred --------cCChhccceeeeeeccccceeeeeee-eee--------------------ecCCCccceEEEEEcCCCce-e
Confidence 11246778999999998655554422 222 12345578999999999987 4
Q ss_pred EEecCCCeEE
Q 018675 335 ASASDDGMIK 344 (352)
Q Consensus 335 ~s~~~Dg~i~ 344 (352)
+.|...|.+.
T Consensus 272 a~gt~~G~v~ 281 (737)
T KOG1524|consen 272 TCGTSTGQLI 281 (737)
T ss_pred eccccCceEE
Confidence 5555555543
No 191
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.72 E-value=3.4e-15 Score=125.58 Aligned_cols=265 Identities=17% Similarity=0.301 Sum_probs=174.6
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecC--------CC----ceeeeeeeeeecceecce
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQS--------AS----SRFWNCKAVLEEMHTRTV 77 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~--------~~----~~~~~~~~~~~~~h~~~v 77 (352)
..+-+..|..|...|+++.|+|+ +.+||||+++|.+.+|... +. ++.|..+... ..|...|
T Consensus 54 ~V~y~s~Ls~H~~aVN~vRf~p~------gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~l-r~h~~di 126 (434)
T KOG1009|consen 54 KVEYLSSLSRHTRAVNVVRFSPD------GELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVL-RGHRDDI 126 (434)
T ss_pred eEEEeecccCCcceeEEEEEcCC------cCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEe-cccccch
Confidence 44566788999999999999997 6899999999999999765 20 1224333333 3488999
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE
Q 018675 78 RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 157 (352)
+.++|+|++.++++++.|+++.+||...+. ....+..|..-|..++|.|-++++++-+.|+..+.+.+...+...++.
T Consensus 127 ydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~--l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~ 204 (434)
T KOG1009|consen 127 YDLAWSPDSNFLVSGSVDNSVRLWDVHAGQ--LLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHG 204 (434)
T ss_pred hhhhccCCCceeeeeeccceEEEEEeccce--eEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeee
Confidence 999999999999999999999999988774 466778899999999999999999999999877777654322211111
Q ss_pred --Eee---c-----------Cc----cCeeEEEEcCCCCEEEEEe----CCCcEEEE--ecCCCCCCCceeEeeeeccCC
Q 018675 158 --VLQ---G-----------HA----QDVKMVQWHPTMDVLFSCS----YDNTIKVW--WAEDTDSDNWHCVQTISESNN 211 (352)
Q Consensus 158 --~~~---~-----------h~----~~v~~~~~~~~~~~l~s~~----~d~~i~iw--~~~~~~~~~~~~~~~~~~~~~ 211 (352)
... . |. .....++|+|++.++++.+ ..+.+.+. ++.... ...+... ..+
T Consensus 205 ~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk-~l~rP~~----~lp 279 (434)
T KOG1009|consen 205 LDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRK-DLKRPAA----RLP 279 (434)
T ss_pred eeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccc-cccCcee----ecC
Confidence 000 0 11 1234567899998887643 12222111 000100 0001111 112
Q ss_pred CCcccEEEEEEcCC-----------------CCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEE
Q 018675 212 GHSSTIWALSFNAK-----------------GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV 274 (352)
Q Consensus 212 ~h~~~i~~l~~~~~-----------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 274 (352)
.-..+...+.|+|- .+.+++....+.|.+||.+. ..+++...+.|-..++.+
T Consensus 280 ~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~-----------~~P~~~v~nihy~~iTDi 348 (434)
T KOG1009|consen 280 SPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQT-----------LEPLAVVDNIHYSAITDI 348 (434)
T ss_pred CCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEecccc-----------ccceEEEeeeeeeeecce
Confidence 23344555555441 11233333456789998642 245666667788889999
Q ss_pred EecCCc-eEEecCCCCeEEEEEccCC
Q 018675 275 HWSREG-IIASGAADDSVQFFVESKD 299 (352)
Q Consensus 275 ~~~~~~-~~~s~~~d~~v~~~~~~~~ 299 (352)
+|++++ .++..+.||..-+......
T Consensus 349 aws~dg~~l~vSS~DGyCS~vtfe~~ 374 (434)
T KOG1009|consen 349 AWSDDGSVLLVSSTDGFCSLVTFEPW 374 (434)
T ss_pred eecCCCcEEEEeccCCceEEEEEcch
Confidence 999987 7888899998766654443
No 192
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.71 E-value=4.5e-16 Score=135.15 Aligned_cols=207 Identities=21% Similarity=0.359 Sum_probs=149.5
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
...|+-+++||.+.+-+....- . .....|.+++.+..|+|||.-|++++.||.|++|.. ++ ....++....
T Consensus 75 ~d~~~i~s~DGkf~il~k~~rV-----E-~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sG--MLRStl~Q~~ 145 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKSARV-----E-RSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SG--MLRSTVVQNE 145 (737)
T ss_pred cceEEEEcCCceEEEecccchh-----h-hhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cc--hHHHHHhhcC
Confidence 4678888999999988654321 1 122569999999999999999999999999999964 33 2344555667
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 198 (352)
.+|.|++|.|+.+.++-|..+ .+.+=-+... .+ +-..++|..-|.+++|+|..+.+++|++|-..++||....
T Consensus 146 ~~v~c~~W~p~S~~vl~c~g~-h~~IKpL~~n--~k-~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~--- 218 (737)
T KOG1524|consen 146 ESIRCARWAPNSNSIVFCQGG-HISIKPLAAN--SK-IIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGA--- 218 (737)
T ss_pred ceeEEEEECCCCCceEEecCC-eEEEeecccc--cc-eeEEeccCcEEEEeecCccccceeecCCceeEEeecccCc---
Confidence 889999999987765555443 3444333322 12 3457789999999999999999999999999999975432
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR 278 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 278 (352)
.+ .....|+.+|++++|+|+ +.++.++. +++|+ .....++|+.++|++
T Consensus 219 ------~L-f~S~~~ey~ITSva~npd-~~~~v~S~-nt~R~-----------------------~~p~~GSifnlsWS~ 266 (737)
T KOG1524|consen 219 ------NL-FTSAAEEYAITSVAFNPE-KDYLLWSY-NTARF-----------------------SSPRVGSIFNLSWSA 266 (737)
T ss_pred ------cc-ccCChhccceeeeeeccc-cceeeeee-eeeee-----------------------cCCCccceEEEEEcC
Confidence 11 123468999999999999 55555543 34441 122456799999999
Q ss_pred Cc-eEEecCCCCeEEE
Q 018675 279 EG-IIASGAADDSVQF 293 (352)
Q Consensus 279 ~~-~~~s~~~d~~v~~ 293 (352)
+| .++.|...|.+.+
T Consensus 267 DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 267 DGTQATCGTSTGQLIV 282 (737)
T ss_pred CCceeeccccCceEEE
Confidence 98 5777777777654
No 193
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=3.3e-16 Score=132.29 Aligned_cols=199 Identities=19% Similarity=0.249 Sum_probs=141.1
Q ss_pred EEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEcc
Q 018675 25 WSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDV 104 (352)
Q Consensus 25 ~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 104 (352)
-+++|+++ +..+++++.||++|+|++..-.. ...+..|.+.|.++.|+|||+.|++-+.| ...+|+..
T Consensus 148 k~vaf~~~------gs~latgg~dg~lRv~~~Ps~~t-----~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~ 215 (398)
T KOG0771|consen 148 KVVAFNGD------GSKLATGGTDGTLRVWEWPSMLT-----ILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVN 215 (398)
T ss_pred eEEEEcCC------CCEeeeccccceEEEEecCcchh-----hhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEec
Confidence 45778876 46899999999999999654322 12234588999999999999999999999 89999987
Q ss_pred CCceeeeEeec--cccCCeeEEEECCCC---cE--EEEeeCCCcEEEEecCCCCe--eEEEEEeecCccCeeEEEEcCCC
Q 018675 105 GGDYECVATLE--GHENEVKSVSWNASG---TL--LATCGRDKSVWIWEVMPGNE--FECVSVLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 105 ~~~~~~~~~~~--~h~~~v~~v~~~~~~---~~--l~s~~~d~~v~vwd~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~ 175 (352)
++- +++... .-+.....+.|+.++ .+ ++....-+.|+.||+..... .........-...|.+++.++++
T Consensus 216 ~g~--~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dG 293 (398)
T KOG0771|consen 216 TGA--ALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDG 293 (398)
T ss_pred cCc--hhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCC
Confidence 762 233222 233456678888766 33 33334446677776532111 00111111223468999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
++++.|+.||.|.|++... .+.+.-....|...|+.|.|+|+.+++++-+.|.+..+..+..
T Consensus 294 kf~AlGT~dGsVai~~~~~--------lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 294 KFLALGTMDGSVAIYDAKS--------LQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred cEEEEeccCCcEEEEEece--------eeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 9999999999999996543 2223333457999999999999999999999999999987643
No 194
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.70 E-value=6.6e-16 Score=130.49 Aligned_cols=202 Identities=23% Similarity=0.266 Sum_probs=138.0
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE
Q 018675 78 RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 157 (352)
.+++|+++|..+++|+.||++++|+.+.. ..+.....|.+.|.++.|+|||++|++-+.| ..+||+...+.......
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~--~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSM--LTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcc--hhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 67899999999999999999999996543 2344556889999999999999999999999 89999997763322111
Q ss_pred EeecCccCeeEEEEcCCC---CEE--EEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 158 VLQGHAQDVKMVQWHPTM---DVL--FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 158 ~~~~h~~~v~~~~~~~~~---~~l--~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
. ..-......+.|+.+. .+. +....-+.|+.|++..-..++. ......... ...|.+++.+++|++++.|
T Consensus 225 ~-~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~---l~~~~~~~~-~~siSsl~VS~dGkf~AlG 299 (398)
T KOG0771|consen 225 P-FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNF---LRLRKKIKR-FKSISSLAVSDDGKFLALG 299 (398)
T ss_pred C-cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccc---cchhhhhhc-cCcceeEEEcCCCcEEEEe
Confidence 1 1122334456676554 222 2333445666665432221111 111111112 2479999999999999999
Q ss_pred eCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeee
Q 018675 233 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 312 (352)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 312 (352)
+.||.|.|++... ++ .+..
T Consensus 300 T~dGsVai~~~~~--lq-----------------------------------------------------------~~~~ 318 (398)
T KOG0771|consen 300 TMDGSVAIYDAKS--LQ-----------------------------------------------------------RLQY 318 (398)
T ss_pred ccCCcEEEEEece--ee-----------------------------------------------------------eeEe
Confidence 9999999997521 00 0001
Q ss_pred cccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 313 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 313 ~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
..+.|...|+.+.|+|+.+ .+++.+.|..+.|-.+.
T Consensus 319 vk~aH~~~VT~ltF~Pdsr-~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 319 VKEAHLGFVTGLTFSPDSR-YLASVSSDNEAAVTKLA 354 (398)
T ss_pred ehhhheeeeeeEEEcCCcC-cccccccCCceeEEEEe
Confidence 1357888999999999876 57788889888887764
No 195
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.68 E-value=1.8e-15 Score=133.96 Aligned_cols=231 Identities=16% Similarity=0.288 Sum_probs=155.7
Q ss_pred eCCCeEEEEecCCCceeeeeeeeee-cceecceEEEEECC-CCCEEEEEeCCCcEEEEEccCCce-----eeeEeecccc
Q 018675 46 SGDKTVRIWEQSASSRFWNCKAVLE-EMHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDY-----ECVATLEGHE 118 (352)
Q Consensus 46 s~D~~v~~w~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~i~~~~~~~~-----~~~~~~~~h~ 118 (352)
|.-|.|-||++....++- ...+. -.....|+.+.|.| |...||+++.||.|++|....+.. .+...+..|.
T Consensus 600 g~gG~iai~el~~PGrLP--Dgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~ 677 (1012)
T KOG1445|consen 600 GSGGVIAIYELNEPGRLP--DGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHG 677 (1012)
T ss_pred CCCceEEEEEcCCCCCCC--cccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeeccc
Confidence 457899999987665421 11111 12346789999999 778899999999999998754332 3345678899
Q ss_pred CCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q 018675 119 NEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS 197 (352)
Q Consensus 119 ~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 197 (352)
..|+++.|+| -.+.|++++.|-+|++||++... ....+.+|+..|..++|+|+|+.+++...||+|++|.......
T Consensus 678 eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~---~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 678 EKITSLRFHPLAADVLAVASYDSTIELWDLANAK---LYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ 754 (1012)
T ss_pred ceEEEEEecchhhhHhhhhhccceeeeeehhhhh---hhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCC
Confidence 9999999999 45689999999999999997654 3456889999999999999999999999999999996554322
Q ss_pred CCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC----CcEEEEcCCccccccCCCCccceeeEEeecccCcc--e
Q 018675 198 DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD----LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT--I 271 (352)
Q Consensus 198 ~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i 271 (352)
. +.+....-+..-..+.|--+|++++..|-| ..|.+|+..... ..++.+..---... +
T Consensus 755 p-------v~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~---------~~pl~t~~lDvaps~Lv 818 (1012)
T KOG1445|consen 755 P-------VYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLD---------LRPLYTQVLDVAPSPLV 818 (1012)
T ss_pred c-------cccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhcc---------CCcceeeeecccCcccc
Confidence 1 111111111223346677789998877755 467777653211 01121111000011 1
Q ss_pred EEEEecCCceEEecCCCCeEEEEEcc
Q 018675 272 FSVHWSREGIIASGAADDSVQFFVES 297 (352)
Q Consensus 272 ~~~~~~~~~~~~s~~~d~~v~~~~~~ 297 (352)
-....+.+-.+++|-.|..|++|...
T Consensus 819 P~YD~Ds~~lfltGKGD~~v~~yEv~ 844 (1012)
T KOG1445|consen 819 PHYDYDSNVLFLTGKGDRFVNMYEVI 844 (1012)
T ss_pred ccccCCCceEEEecCCCceEEEEEec
Confidence 11222223368899999999998653
No 196
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68 E-value=1e-14 Score=136.04 Aligned_cols=260 Identities=18% Similarity=0.192 Sum_probs=168.4
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc----eeeeeeeeeecc---eecceEEEEECCCCCEEEEEeC
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS----RFWNCKAVLEEM---HTRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~----~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~~~ 94 (352)
..|+.+.+-..+. ..++++|+.||.||||+-.... ++.+.-..+... -.+.=.-+.|.....+|+++|.
T Consensus 1110 t~Vs~l~liNe~D----~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd 1185 (1387)
T KOG1517|consen 1110 TRVSDLELINEQD----DALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGD 1185 (1387)
T ss_pred Cccceeeeecccc----hhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCC
Confidence 4677777755432 4689999999999999743321 110100001000 0111133567776666666666
Q ss_pred CCcEEEEEccCCceeeeEeeccccCCeeEEEEC-CCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC--eeEEEE
Q 018675 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD--VKMVQW 171 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~--v~~~~~ 171 (352)
-..|+|||..... .+.-...+.+.-|+++.-+ ..|+.+++|-.||.|++||.+....-..+.....|+.. |..+.+
T Consensus 1186 ~r~IRIWDa~~E~-~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~sl 1264 (1387)
T KOG1517|consen 1186 VRSIRIWDAHKEQ-VVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSL 1264 (1387)
T ss_pred eeEEEEEecccce-eEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEe
Confidence 8899999976432 2222223444567776543 35789999999999999998766554456667788876 999999
Q ss_pred cCCCCE-EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 172 HPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 172 ~~~~~~-l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
.+.|-. |++|+.+|.|++||++.....++. ++.. ...-++..+++..|++...+|+|+. +.|+||++....+..
T Consensus 1265 q~~G~~elvSgs~~G~I~~~DlR~~~~e~~~---~iv~-~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~ 1339 (1387)
T KOG1517|consen 1265 QRQGLGELVSGSQDGDIQLLDLRMSSKETFL---TIVA-HWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNI 1339 (1387)
T ss_pred ecCCCcceeeeccCCeEEEEecccCcccccc---eeee-ccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcc
Confidence 886654 999999999999998764222221 1110 0011345889999999999999998 999999976433222
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEcc
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES 297 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~ 297 (352)
.. .-..+.+.....+.++.|.|-. .+++|+.|.+|.+|...
T Consensus 1340 ~k------~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~ 1381 (1387)
T KOG1517|consen 1340 IK------YNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCE 1381 (1387)
T ss_pred cc------cCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecC
Confidence 11 1112223334556788888865 67888889999998554
No 197
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.66 E-value=4.4e-15 Score=129.44 Aligned_cols=171 Identities=19% Similarity=0.282 Sum_probs=129.1
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEe-eccccCCeeEEEECC--CCcEEEEeeCCCcEEEEec
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT-LEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~vwd~ 147 (352)
..|++-|+++.|+.+|.+|++|+.|-.+.|||....+ ++.. -.+|...|.++.|-| +..++++|..|..|+++|+
T Consensus 47 ~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~K--llhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl 124 (758)
T KOG1310|consen 47 TGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYK--LLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDL 124 (758)
T ss_pred ccccceecceeecCCCCEEeecCCcceEEeecchhcc--eeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEec
Confidence 4599999999999999999999999999999976433 3333 368999999999987 4568999999999999998
Q ss_pred CCCC-------eeEEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCc--eeEeeeeccCCCCcccE
Q 018675 148 MPGN-------EFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNW--HCVQTISESNNGHSSTI 217 (352)
Q Consensus 148 ~~~~-------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~--~~~~~~~~~~~~h~~~i 217 (352)
...+ .......+..|...|..++--|.+ ..+.++++||+|+-+|+++...-+. .+...+... ...--..
T Consensus 125 ~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny-~~~liel 203 (758)
T KOG1310|consen 125 DSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNY-NPQLIEL 203 (758)
T ss_pred ccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHh-chhhhee
Confidence 6321 122345567899999999988887 5788999999999999987432111 011111111 1122356
Q ss_pred EEEEEcCCC-CEEEEEeCCCcEEEEcCC
Q 018675 218 WALSFNAKG-DKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 218 ~~l~~~~~~-~~l~s~~~dg~i~iwd~~ 244 (352)
.+++.+|.. .+|+.|+.|-..++||.+
T Consensus 204 k~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 204 KCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred eeeeecCCCCceEEecCCCchhhhhhhh
Confidence 788999975 578899999999999954
No 198
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.65 E-value=4.9e-13 Score=122.85 Aligned_cols=285 Identities=21% Similarity=0.287 Sum_probs=178.2
Q ss_pred eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccC--CceeeeEeeccccCCeeE
Q 018675 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG--GDYECVATLEGHENEVKS 123 (352)
Q Consensus 46 s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~--~~~~~~~~~~~h~~~v~~ 123 (352)
--+..+.+|+.....+. .........|...+++.+++|+++++|+|..||.|.+|.... ++......+.=|...|++
T Consensus 178 ~~~~~~~~~~v~~~~~~-~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~ 256 (792)
T KOG1963|consen 178 VHMCKIHIYFVPKHTKH-TSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNS 256 (792)
T ss_pred EEeeeEEEEEeccccee-eccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccce
Confidence 34567778877654321 112222245777889999999999999999999999997654 222222334457889999
Q ss_pred EEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeE
Q 018675 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV 203 (352)
Q Consensus 124 v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~ 203 (352)
++|+++|.+|++||..+-+.+|.+..++. +- +..-...|..+.++|++......-.|+.|.+-...+-. ....+
T Consensus 257 L~fS~~G~~LlSGG~E~VLv~Wq~~T~~k-qf---LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~--~k~tI 330 (792)
T KOG1963|consen 257 LSFSSDGAYLLSGGREGVLVLWQLETGKK-QF---LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLE--IKSTI 330 (792)
T ss_pred eEEecCCceEeecccceEEEEEeecCCCc-cc---ccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchh--hhhhc
Confidence 99999999999999999999999866542 22 22234679999999999998888899999988543211 11111
Q ss_pred eeeecc----CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCc------ceEE
Q 018675 204 QTISES----NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR------TIFS 273 (352)
Q Consensus 204 ~~~~~~----~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~i~~ 273 (352)
..+... ..+.+.-...++++|.-+.++-.+..|.|.+||+....... +...+...++.. .+.+
T Consensus 331 sgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~-------~~~v~~~n~~~~~~n~~v~ita 403 (792)
T KOG1963|consen 331 SGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIY-------KLQVCDENYSDGDVNIQVGITA 403 (792)
T ss_pred cCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceee-------eEEEEeecccCCcceeEEeeee
Confidence 111111 11234455678899977778889999999999975322111 000000111111 1222
Q ss_pred EEecCCc-eEEec--------CCCC--eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcc-eEEEecCCC
Q 018675 274 VHWSREG-IIASG--------AADD--SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR-LLASASDDG 341 (352)
Q Consensus 274 ~~~~~~~-~~~s~--------~~d~--~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~-~l~s~~~Dg 341 (352)
+..+..+ .+++. ..|| .+++|...+.. ...........+|...+.+..+.+..+. ..+|+|.||
T Consensus 404 v~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~----kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg 479 (792)
T KOG1963|consen 404 VARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNS----KTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDG 479 (792)
T ss_pred ehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCc----ceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCC
Confidence 2222222 22222 1222 35677554321 1222222345688877777777654443 578999999
Q ss_pred eEEEEee
Q 018675 342 MIKIWEL 348 (352)
Q Consensus 342 ~i~iw~~ 348 (352)
.+|||.+
T Consensus 480 ~~KiW~~ 486 (792)
T KOG1963|consen 480 DFKIWVF 486 (792)
T ss_pred eEEEEEE
Confidence 9999998
No 199
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.61 E-value=1.1e-12 Score=103.56 Aligned_cols=282 Identities=17% Similarity=0.231 Sum_probs=172.5
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCC---c--eeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS---S--RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA 96 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~---~--~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~ 96 (352)
..|++-+|+|. .++|+.|+.+|++.+..+.+- . ...+.+-.-+..|.++|+.++|. .++|++|+ ||
T Consensus 11 ~tvf~qa~sp~------~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG 81 (325)
T KOG0649|consen 11 NTVFAQAISPS------KQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DG 81 (325)
T ss_pred HHHHHHhhCCc------ceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-Cc
Confidence 45666677775 589999999999999976431 1 11111222236799999999998 35666654 59
Q ss_pred cEEEEEccCCc----eeeeEe--ecccc-----CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC
Q 018675 97 TTCIWEDVGGD----YECVAT--LEGHE-----NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 97 ~i~i~~~~~~~----~~~~~~--~~~h~-----~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
.++-|...... .+.... ...|. -.|+++...|..+-++.++.|+.+.-||+..++ ....+.+|+.-
T Consensus 82 ~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~---i~r~~rGHtDY 158 (325)
T KOG0649|consen 82 LVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGR---IQREYRGHTDY 158 (325)
T ss_pred eEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCE---EEEEEcCCcce
Confidence 99988642110 000000 11122 357888888877777778899999999997764 45778999999
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccC------CCCcccEEEEEEcCCCCEEEEEeCCCcEE
Q 018675 166 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN------NGHSSTIWALSFNAKGDKLVSCSDDLTIK 239 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~------~~h~~~i~~l~~~~~~~~l~s~~~dg~i~ 239 (352)
+.++.-......+++|++||++++||.... ++.+.+.... ..-..+|-+++-+. ..|+ ||..-.+.
T Consensus 159 vH~vv~R~~~~qilsG~EDGtvRvWd~kt~-----k~v~~ie~yk~~~~lRp~~g~wigala~~e--dWlv-CGgGp~ls 230 (325)
T KOG0649|consen 159 VHSVVGRNANGQILSGAEDGTVRVWDTKTQ-----KHVSMIEPYKNPNLLRPDWGKWIGALAVNE--DWLV-CGGGPKLS 230 (325)
T ss_pred eeeeeecccCcceeecCCCccEEEEecccc-----ceeEEeccccChhhcCcccCceeEEEeccC--ceEE-ecCCCcee
Confidence 999988666667899999999999976543 3344443211 11245666676543 3455 44567899
Q ss_pred EEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCc
Q 018675 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 319 (352)
+|.++... ..+.+. ....+..+.|..+ .+++++..+-++-|..... +......-.-
T Consensus 231 lwhLrsse-----------~t~vfp--ipa~v~~v~F~~d-~vl~~G~g~~v~~~~l~Gv----------l~a~ip~~s~ 286 (325)
T KOG0649|consen 231 LWHLRSSE-----------STCVFP--IPARVHLVDFVDD-CVLIGGEGNHVQSYTLNGV----------LQANIPVEST 286 (325)
T ss_pred EEeccCCC-----------ceEEEe--cccceeEeeeecc-eEEEeccccceeeeeeccE----------EEEeccCCcc
Confidence 99875321 112222 1223444555444 4555655666666654431 1111112222
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
..+..+|+-..-++|..+|-...+.|+.
T Consensus 287 ~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 287 ACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred ceeeecccCCceEEEEecccceeeeeee
Confidence 3566666544345676777777777753
No 200
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.61 E-value=8.1e-12 Score=110.32 Aligned_cols=264 Identities=11% Similarity=0.170 Sum_probs=156.2
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEe-eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASC-SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~-s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+.+.++. +.+....++++|+ +++|+.+ ..++.|.+|++.....+ ....... .......++|+|++++++
T Consensus 26 ~~~~~~~-~~~~~~~l~~spd------~~~lyv~~~~~~~i~~~~~~~~g~l-~~~~~~~--~~~~p~~i~~~~~g~~l~ 95 (330)
T PRK11028 26 TLLQVVD-VPGQVQPMVISPD------KRHLYVGVRPEFRVLSYRIADDGAL-TFAAESP--LPGSPTHISTDHQGRFLF 95 (330)
T ss_pred eeeeEEe-cCCCCccEEECCC------CCEEEEEECCCCcEEEEEECCCCce-EEeeeec--CCCCceEEEECCCCCEEE
Confidence 3444443 3355667899987 4566554 46889999998632221 1111111 223457899999999888
Q ss_pred EEeC-CCcEEEEEccCCc-e-eeeEeeccccCCeeEEEECCCCcEEEE-eeCCCcEEEEecCCCCeeEEE----EEeecC
Q 018675 91 TASF-DATTCIWEDVGGD-Y-ECVATLEGHENEVKSVSWNASGTLLAT-CGRDKSVWIWEVMPGNEFECV----SVLQGH 162 (352)
Q Consensus 91 s~~~-d~~i~i~~~~~~~-~-~~~~~~~~h~~~v~~v~~~~~~~~l~s-~~~d~~v~vwd~~~~~~~~~~----~~~~~h 162 (352)
+++. ++.+.+|+..... . .....+. +.....+++++|+++++++ ...+++|.+||+......... .....
T Consensus 96 v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~- 173 (330)
T PRK11028 96 SASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE- 173 (330)
T ss_pred EEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-
Confidence 7764 7889999875321 1 1222222 2345678889999988754 456799999998653221110 01111
Q ss_pred ccCeeEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeeeccCC--CCcccEEEEEEcCCCCEEEEEe-CCCcE
Q 018675 163 AQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNN--GHSSTIWALSFNAKGDKLVSCS-DDLTI 238 (352)
Q Consensus 163 ~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~--~h~~~i~~l~~~~~~~~l~s~~-~dg~i 238 (352)
......+.|+|++++++++.. ++.|.+|++... .......+.+..... .+......+.++|++++++++. .++.|
T Consensus 174 g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I 252 (330)
T PRK11028 174 GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDP-HGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLI 252 (330)
T ss_pred CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCC-CCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeE
Confidence 234567899999999988876 899999988632 112223333321110 1122334688999999988875 47899
Q ss_pred EEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEE-ecCCCCeEEEEEcc
Q 018675 239 KIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIA-SGAADDSVQFFVES 297 (352)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~-s~~~d~~v~~~~~~ 297 (352)
.+|+++.... .......+.. ......+.+++++ +++ +...++++.+|...
T Consensus 253 ~v~~i~~~~~-------~~~~~~~~~~--~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 253 SVFSVSEDGS-------VLSFEGHQPT--ETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred EEEEEeCCCC-------eEEEeEEEec--cccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 9998742110 0111111111 1233456777776 444 44448899998653
No 201
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=1.6e-13 Score=125.04 Aligned_cols=236 Identities=21% Similarity=0.287 Sum_probs=146.9
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC---CcEEEEEccCCceeeeEeeccccCCeeEE
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD---ATTCIWEDVGGDYECVATLEGHENEVKSV 124 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~i~i~~~~~~~~~~~~~~~~h~~~v~~v 124 (352)
+..+.+||...... ..+ ..|...+.+.+|+|||+.|+.++.+ ..|.+||..+++...+....+| ...+
T Consensus 183 ~~~i~i~d~dg~~~-----~~l-t~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~ 253 (429)
T PRK01742 183 PYEVRVADYDGFNQ-----FIV-NRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAP 253 (429)
T ss_pred eEEEEEECCCCCCc-----eEe-ccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCce
Confidence 46899998765421 111 2356688999999999999988754 3689999877654444444443 3468
Q ss_pred EECCCCcEEEEee-CCCcEEEE--ecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCc
Q 018675 125 SWNASGTLLATCG-RDKSVWIW--EVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNW 200 (352)
Q Consensus 125 ~~~~~~~~l~s~~-~d~~v~vw--d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~ 200 (352)
+|+|+|+.|+.++ .++.+.+| |+..+. ...+..+...+....|+|+++.++..+ .++...||.+..... .
T Consensus 254 ~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~----~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~-~- 327 (429)
T PRK01742 254 AFSPDGSRLAFASSKDGVLNIYVMGANGGT----PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGG-G- 327 (429)
T ss_pred eECCCCCEEEEEEecCCcEEEEEEECCCCC----eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCC-C-
Confidence 9999999887764 67876666 443332 223444555677899999999776555 578888886543211 1
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG 280 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 280 (352)
...+ .+.. ....|+|+|++|+..+.++ +.+||+...... .+. ... ...+..|+|++
T Consensus 328 --~~~l-----~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~---------~lt--~~~---~~~~~~~sPdG 383 (429)
T PRK01742 328 --ASLV-----GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTE---------VLS--STF---LDESPSISPNG 383 (429)
T ss_pred --eEEe-----cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeE---------Eec--CCC---CCCCceECCCC
Confidence 1111 1222 3468999999998887765 445876432111 000 011 12345678877
Q ss_pred -eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCC
Q 018675 281 -IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329 (352)
Q Consensus 281 -~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~ 329 (352)
+++.++.++...+|.... .++ ....+..+|.+.+...+|||-
T Consensus 384 ~~i~~~s~~g~~~~l~~~~---~~G----~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 384 IMIIYSSTQGLGKVLQLVS---ADG----RFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred CEEEEEEcCCCceEEEEEE---CCC----CceEEccCCCCCCCCcccCCC
Confidence 677777777776663311 011 122344577888999999984
No 202
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.59 E-value=5e-13 Score=121.99 Aligned_cols=253 Identities=15% Similarity=0.212 Sum_probs=165.7
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee-eeeeeeeecceecceEEEEECCCC--CEEEEEeCCCc
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF-WNCKAVLEEMHTRTVRSCAWSPSG--KLLATASFDAT 97 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~-~~~~~~~~~~h~~~v~~~~~s~~~--~~l~s~~~d~~ 97 (352)
...|.|+.|+|.+ +.++|.|..+|+|-+||+...... -........-|..+++.+.|..+. .-+++++.||.
T Consensus 242 ~s~v~~~~f~p~~-----p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~ 316 (555)
T KOG1587|consen 242 PSEVTCLKFCPFD-----PNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGS 316 (555)
T ss_pred CCceeEEEeccCC-----cceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCc
Confidence 4689999999976 578999999999999998765431 112223334588999999997654 44999999999
Q ss_pred EEEEEccCCce----eeeEeec------cccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCe-----eEEEEEeec
Q 018675 98 TCIWEDVGGDY----ECVATLE------GHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQG 161 (352)
Q Consensus 98 i~i~~~~~~~~----~~~~~~~------~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~-----~~~~~~~~~ 161 (352)
|..|+...-.. .+..... .-...+++++|.+ +...|+.|+++|.|.-=....... ++....+..
T Consensus 317 i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~ 396 (555)
T KOG1587|consen 317 ICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFIT 396 (555)
T ss_pred EeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccc
Confidence 99997532110 0000000 1123578899977 556799999999876622211111 122334556
Q ss_pred CccCeeEEEEcCCCCEEEEEeCCCcEEEEecC-CCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEeCCCcEE
Q 018675 162 HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE-DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIK 239 (352)
Q Consensus 162 h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~-~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~~dg~i~ 239 (352)
|...|.++.++|-+..++..+.|-.++||.-. .... +. ....+...|.+++|||... .++++..||.+-
T Consensus 397 h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~P-----l~----~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~ 467 (555)
T KOG1587|consen 397 HIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASP-----LL----SLDSSPDYVTDVAWSPTRPAVFATVDGDGNLD 467 (555)
T ss_pred cCcceEeeecCCCccceeeeeccceeEeccccCCCCc-----ch----hhhhccceeeeeEEcCcCceEEEEEcCCCcee
Confidence 78889999999976655544459999999543 1111 11 1123455699999999865 466777899999
Q ss_pred EEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEcc
Q 018675 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVES 297 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~ 297 (352)
+||+...... +..+.. ........+.|++. ..++.|...|++.++...
T Consensus 468 iWDLl~~~~~---------Pv~s~~-~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 468 IWDLLQDDEE---------PVLSQK-VCSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred hhhhhccccC---------Cccccc-ccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 9998643211 111111 12344556777774 478899999999999764
No 203
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.58 E-value=4e-12 Score=100.54 Aligned_cols=205 Identities=15% Similarity=0.207 Sum_probs=139.0
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeee---ccee-----cceEEEEECCC
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE---EMHT-----RTVRSCAWSPS 85 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~---~~h~-----~~v~~~~~s~~ 85 (352)
+...++|.+.|+.+.|+. .+|++|+ ||.|+-|.+....+...++...+ -.|. -.|+++.+.|.
T Consensus 55 iv~eqahdgpiy~~~f~d--------~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~ 125 (325)
T KOG0649|consen 55 IVPEQAHDGPIYYLAFHD--------DFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPS 125 (325)
T ss_pred eeeccccCCCeeeeeeeh--------hheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccC
Confidence 345589999999999984 3788875 69999998754322111111111 1122 35789999998
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEee-----
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ----- 160 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~----- 160 (352)
..-++.++.|+.+.-||.+++++ ..++++|+.-|.++.-......+++|++||++++||.+.++....+..++
T Consensus 126 enSi~~AgGD~~~y~~dlE~G~i--~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~l 203 (325)
T KOG0649|consen 126 ENSILFAGGDGVIYQVDLEDGRI--QREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLL 203 (325)
T ss_pred CCcEEEecCCeEEEEEEecCCEE--EEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhc
Confidence 88888888999999999998865 45789999999999885555678899999999999998776444433322
Q ss_pred -cCc-cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcE
Q 018675 161 -GHA-QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTI 238 (352)
Q Consensus 161 -~h~-~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i 238 (352)
.|. .-|.+++-+ ...++.| ....+.+|.++.... ...+. -..++..+.|.. +.++++|..+.|
T Consensus 204 Rp~~g~wigala~~--edWlvCG-gGp~lslwhLrsse~-----t~vfp-----ipa~v~~v~F~~--d~vl~~G~g~~v 268 (325)
T KOG0649|consen 204 RPDWGKWIGALAVN--EDWLVCG-GGPKLSLWHLRSSES-----TCVFP-----IPARVHLVDFVD--DCVLIGGEGNHV 268 (325)
T ss_pred CcccCceeEEEecc--CceEEec-CCCceeEEeccCCCc-----eEEEe-----cccceeEeeeec--ceEEEeccccce
Confidence 222 224455543 4455554 466789998765432 22221 124566677753 457788888888
Q ss_pred EEEcCC
Q 018675 239 KIWGAD 244 (352)
Q Consensus 239 ~iwd~~ 244 (352)
.-|.+.
T Consensus 269 ~~~~l~ 274 (325)
T KOG0649|consen 269 QSYTLN 274 (325)
T ss_pred eeeeec
Confidence 888654
No 204
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.54 E-value=3.3e-11 Score=100.79 Aligned_cols=185 Identities=16% Similarity=0.232 Sum_probs=129.3
Q ss_pred EEEEeeCCC--eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec---
Q 018675 41 VFASCSGDK--TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE--- 115 (352)
Q Consensus 41 ~l~s~s~D~--~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~--- 115 (352)
++|-.+.+. .+++.+......+ |. .....+|.++.++- ++|+++-.+. |.|||..+- +.+.++.
T Consensus 58 LvaiV~~~qpr~Lkv~~~Kk~~~I--Ce----~~fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~M--klLhTI~t~~ 126 (391)
T KOG2110|consen 58 LVAIVSIKQPRKLKVVHFKKKTTI--CE----IFFPTSILAVRMNR--KRLVVCLEES-IYIYDIKDM--KLLHTIETTP 126 (391)
T ss_pred eeEEEecCCCceEEEEEcccCceE--EE----EecCCceEEEEEcc--ceEEEEEccc-EEEEecccc--eeehhhhccC
Confidence 455555443 4777776544322 11 12356788888874 4666666555 999998654 3344432
Q ss_pred cccCCeeEEEECCCCcEEEE--eeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCc-EEEEec
Q 018675 116 GHENEVKSVSWNASGTLLAT--CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT-IKVWWA 192 (352)
Q Consensus 116 ~h~~~v~~v~~~~~~~~l~s--~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~-i~iw~~ 192 (352)
.+...+.++++++.+.+++- ....|.|.+||+..- ..+..+.+|...+.+++|+|+|.+||+||+.|+ ||++.+
T Consensus 127 ~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl---~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v 203 (391)
T KOG2110|consen 127 PNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINL---QPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSV 203 (391)
T ss_pred CCccceEeeccCCCCceEEecCCCCCceEEEEEcccc---eeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence 45566777777777777663 234588999998543 456778899999999999999999999999987 689977
Q ss_pred CCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
.+.+ .+.++.... --..|.+|+|+|++++|++.+..++|.+|.++..
T Consensus 204 ~~G~-----kl~eFRRG~--~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 204 PEGQ-----KLYEFRRGT--YPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred CCcc-----EeeeeeCCc--eeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 5542 233332211 1357899999999999999999999999987643
No 205
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.53 E-value=6.1e-12 Score=104.87 Aligned_cols=187 Identities=29% Similarity=0.583 Sum_probs=126.5
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEEEEeCCCcEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLATASFDATTCIW 101 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~i~ 101 (352)
.+..++|++. -..||.+..|.+||+|+.... +...++..-.+.|+|++|-|.+ ..|+.| .-+.|++|
T Consensus 100 dlr~~aWhqH------~~~fava~nddvVriy~ksst-----~pt~Lks~sQrnvtclawRPlsaselavg-Cr~gIciW 167 (445)
T KOG2139|consen 100 DLRGVAWHQH------IIAFAVATNDDVVRIYDKSST-----CPTKLKSVSQRNVTCLAWRPLSASELAVG-CRAGICIW 167 (445)
T ss_pred ceeeEeechh------hhhhhhhccCcEEEEeccCCC-----CCceecchhhcceeEEEeccCCcceeeee-ecceeEEE
Confidence 5667899984 246899999999999987652 2233333345789999999965 455554 45669999
Q ss_pred EccC-Cce---------ee--eEeeccccCCeeEEEECCCCcEEEEeeC-CCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 102 EDVG-GDY---------EC--VATLEGHENEVKSVSWNASGTLLATCGR-DKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 102 ~~~~-~~~---------~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
.... ... .+ +..-.+| ..|+++.|++||..+++++. |..|.+||...+... ++. ......+.-
T Consensus 168 ~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~-pL~--~~glgg~sl 243 (445)
T KOG2139|consen 168 SDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKI-PLI--PKGLGGFSL 243 (445)
T ss_pred EcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcc-ccc--ccCCCceee
Confidence 6532 110 01 1122344 57999999999999999884 578999998655422 221 123356778
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE-EEeC
Q 018675 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSD 234 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~-s~~~ 234 (352)
+.|+||+..++++.-|+..++|.... .|.+..-+. + .+.|..-+|+|.|.+|+ +++.
T Consensus 244 LkwSPdgd~lfaAt~davfrlw~e~q----~wt~erw~l----g-sgrvqtacWspcGsfLLf~~sg 301 (445)
T KOG2139|consen 244 LKWSPDGDVLFAATCDAVFRLWQENQ----SWTKERWIL----G-SGRVQTACWSPCGSFLLFACSG 301 (445)
T ss_pred EEEcCCCCEEEEecccceeeeehhcc----cceecceec----c-CCceeeeeecCCCCEEEEEEcC
Confidence 99999999999999999999994322 232221111 1 23788999999998765 4443
No 206
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.52 E-value=2.1e-12 Score=108.62 Aligned_cols=164 Identities=14% Similarity=0.197 Sum_probs=124.7
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccC----CceeeeEeec-cccCCeeEEEECCCCcEEEEeeCCCcEEEEe
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG----GDYECVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWE 146 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~----~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd 146 (352)
.|.+-|+++.|+.++++|++|+.|..+++|.... ...+++.... .|.+.|.|++|......+++|+.+++|...|
T Consensus 54 ~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HD 133 (609)
T KOG4227|consen 54 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHD 133 (609)
T ss_pred hhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeee
Confidence 4889999999999999999999999999998532 2223455443 3558999999999889999999999999999
Q ss_pred cCCCCeeEEEEEeecCc---cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCC-CCceeEeeeeccCCCCcccEEEEEE
Q 018675 147 VMPGNEFECVSVLQGHA---QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-DNWHCVQTISESNNGHSSTIWALSF 222 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~h~~~i~~l~~ 222 (352)
+...... ..+ .|. ..|-.+.-+|..+.+++.+.++.+.+||.++... ....|.. .......++-|
T Consensus 134 iEt~qsi---~V~-~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~A-------N~~~~F~t~~F 202 (609)
T KOG4227|consen 134 IETKQSI---YVA-NENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPA-------NSGKNFYTAEF 202 (609)
T ss_pred cccceee---eee-cccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeec-------CCCccceeeee
Confidence 9755432 222 233 3788899999999999999999999999877542 1111111 12355677889
Q ss_pred cCCC-CEEEEEeCCCcEEEEcCCcc
Q 018675 223 NAKG-DKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 223 ~~~~-~~l~s~~~dg~i~iwd~~~~ 246 (352)
+|.. .+|++.+..+-+.+||.+++
T Consensus 203 ~P~~P~Li~~~~~~~G~~~~D~R~~ 227 (609)
T KOG4227|consen 203 HPETPALILVNSETGGPNVFDRRMQ 227 (609)
T ss_pred cCCCceeEEeccccCCCCceeeccc
Confidence 9965 46778888888999998754
No 207
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.52 E-value=2.5e-13 Score=118.31 Aligned_cols=143 Identities=22% Similarity=0.390 Sum_probs=105.9
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCC--------------cee--eeeeeeee-------cceecc
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS--------------SRF--WNCKAVLE-------EMHTRT 76 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~--------------~~~--~~~~~~~~-------~~h~~~ 76 (352)
.+..|+|+.|-|.+. ..|+.+-.+|.+.+|+..-. ..+ .+.+.... ..-+..
T Consensus 218 ~ktsvT~ikWvpg~~-----~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~ 292 (636)
T KOG2394|consen 218 NKSSVTCIKWVPGSD-----SLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGS 292 (636)
T ss_pred cccceEEEEEEeCCC-----ceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecccc
Confidence 347899999999652 45666678999999964211 010 01110000 012357
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEE
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 156 (352)
|+..+|+|||++||+.+.||.++|++..+. +++..++..-+...|++|+|||++|++|++|..|.||.+... ..+
T Consensus 293 in~f~FS~DG~~LA~VSqDGfLRvF~fdt~--eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~er---RVV 367 (636)
T KOG2394|consen 293 INEFAFSPDGKYLATVSQDGFLRIFDFDTQ--ELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEER---RVV 367 (636)
T ss_pred ccceeEcCCCceEEEEecCceEEEeeccHH--HHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccc---eEE
Confidence 788899999999999999999999997654 334555556678999999999999999999999999998644 356
Q ss_pred EEeecCccCeeEEEEc
Q 018675 157 SVLQGHAQDVKMVQWH 172 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~ 172 (352)
..-++|...|..++|.
T Consensus 368 ARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 368 ARGQGHKSWVSVVAFD 383 (636)
T ss_pred EeccccccceeeEeec
Confidence 6778899999999887
No 208
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.52 E-value=2.4e-13 Score=108.51 Aligned_cols=168 Identities=18% Similarity=0.254 Sum_probs=124.8
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeee-----ecceecceEEEEECCCCCEEEEEe
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL-----EEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~-----~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+-.+.|.|..+.-... ...+++.|-.+|.|-+||+.++.+....+... ...|..+|.++.+.+.-..=++|+
T Consensus 148 ~Klgsvmc~~~~~~c~---s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgg 224 (323)
T KOG0322|consen 148 SKLGSVMCQDKDHACG---STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGG 224 (323)
T ss_pred cccCceeeeecccccc---ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCC
Confidence 4556777777544332 23567777789999999998875444333222 134889999999988655567788
Q ss_pred CCCcEEEEEccC--CceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 94 FDATTCIWEDVG--GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 94 ~d~~i~i~~~~~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
.+..+..|.... +..+......-.+-.|..+.+.||++.++|+++|+.++||.-+..+ ++..++-|...|++++|
T Consensus 225 a~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~---pLAVLkyHsagvn~vAf 301 (323)
T KOG0322|consen 225 ADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLN---PLAVLKYHSAGVNAVAF 301 (323)
T ss_pred ccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCC---chhhhhhhhcceeEEEe
Confidence 888888887543 2222222333334568889999999999999999999999876544 45667779999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEec
Q 018675 172 HPTMDVLFSCSYDNTIKVWWA 192 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~ 192 (352)
+|+-..++++|.|++|.+|++
T Consensus 302 spd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 302 SPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CCCCchhhhccCCceEEeeec
Confidence 999899999999999999964
No 209
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=2.4e-12 Score=117.41 Aligned_cols=197 Identities=18% Similarity=0.170 Sum_probs=129.3
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCC---CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGD---KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D---~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+..|...|.+..|+|+ ++.++.++.+ .+|.+|++.++... . +.. .......++|+|||+.|+.
T Consensus 197 ~~lt~~~~~v~~p~wSPD------G~~la~~s~~~~~~~i~i~dl~tg~~~----~-l~~-~~g~~~~~~wSPDG~~La~ 264 (429)
T PRK01742 197 FIVNRSSQPLMSPAWSPD------GSKLAYVSFENKKSQLVVHDLRSGARK----V-VAS-FRGHNGAPAFSPDGSRLAF 264 (429)
T ss_pred eEeccCCCccccceEcCC------CCEEEEEEecCCCcEEEEEeCCCCceE----E-Eec-CCCccCceeECCCCCEEEE
Confidence 345678888999999997 4677777654 47999998765321 1 101 1223446899999998887
Q ss_pred Ee-CCCcEEEEE--ccCCceeeeEeeccccCCeeEEEECCCCcEEEEee-CCCcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 92 AS-FDATTCIWE--DVGGDYECVATLEGHENEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 92 ~~-~d~~i~i~~--~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
++ .++...||. ..++. ...+..+...+....|+|+|+.|+.++ .++...+|++....... ..+ .+.. .
T Consensus 265 ~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~--~~l-~~~~--~ 336 (429)
T PRK01742 265 ASSKDGVLNIYVMGANGGT---PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA--SLV-GGRG--Y 336 (429)
T ss_pred EEecCCcEEEEEEECCCCC---eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe--EEe-cCCC--C
Confidence 65 688777764 33443 234455667788999999999766554 57888899875332211 112 2322 3
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
...|+|+++.++..+.++ +.+||+.... .. .+.. .+ ...++.|+|+|++|+.++.++..++|.+
T Consensus 337 ~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~---~~---~lt~---~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 337 SAQISADGKTLVMINGDN-VVKQDLTSGS---TE---VLSS---TF--LDESPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred CccCCCCCCEEEEEcCCC-EEEEECCCCC---eE---EecC---CC--CCCCceECCCCCEEEEEEcCCCceEEEE
Confidence 467999999988877765 5557764432 11 1111 11 1235789999999999999998888864
No 210
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.50 E-value=1e-12 Score=113.38 Aligned_cols=269 Identities=18% Similarity=0.277 Sum_probs=178.1
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~ 149 (352)
.|.+-|+.+.|+..|..|++|+.|..+.+||...+... ..-..+|...|..-.|-|. ...+++++.||.+++=.+..
T Consensus 140 ~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~-l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~ 218 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPK-LSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILE 218 (559)
T ss_pred CCCCccceeeecccCceeeccCccceEEeehhhccCcc-cccccccccchhhhhccCCCCCcCceeccccCceeeeeecc
Confidence 48899999999999999999999999999998766432 2233588888888889874 34699999999999988765
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc---cEEEEEEcCC
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS---TIWALSFNAK 225 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~---~i~~l~~~~~ 225 (352)
.+..+....+..|...|..++.-|+.. -|.+++.|+.+.-.|+........ ... ...+.. ..++++.+|.
T Consensus 219 t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~--~~c----r~~~~~~~v~L~~Ia~~P~ 292 (559)
T KOG1334|consen 219 TGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEK--FVC----READEKERVGLYTIAVDPR 292 (559)
T ss_pred ccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccce--eee----eccCCccceeeeeEecCCC
Confidence 554444455677888999999888654 578999999998887654322111 111 112223 5778899997
Q ss_pred CC-EEEEEeCCCcEEEEcCCccccccCCC-CccceeeEEeecccCcceEEEEecC-CceEEecCCCCeEEEEEccCCccc
Q 018675 226 GD-KLVSCSDDLTIKIWGADITRMQSGDG-YASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLI 302 (352)
Q Consensus 226 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~v~~~~~~~~~~~ 302 (352)
.. ++++++.|..+++||.+........+ +...-+..-.. -..-.|.++.++. .+-+.+.-.|..|+++.......-
T Consensus 293 nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~-d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~ 371 (559)
T KOG1334|consen 293 NTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVE-DDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGS 371 (559)
T ss_pred CccccccCChhhhhhhhcccchhhccccchhhhcCCccccc-cCcccceeEEecCCccceeeeecccceEEeccccccCC
Confidence 65 78999999999999875322211111 11111111111 1233477788884 445666667777888844332211
Q ss_pred c----Ccccceeeeccccc--CcceeEEEe-cCCCcceEEEecCCCeEEEEeec
Q 018675 303 D----GPSYKMLLKKEKAH--DMDVNSVQW-SPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 303 ~----~~~~~~~~~~~~~h--~~~i~~~~~-sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
. .+......+.++|| ...|-.+-| -|... +++|||+-|.|.||+-.
T Consensus 372 ~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsE-yVvSGSDCGhIFiW~K~ 424 (559)
T KOG1334|consen 372 EPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSE-YVVSGSDCGHIFIWDKK 424 (559)
T ss_pred CCCCCcchhhccchhhcccccccccceeeeccCccc-eEEecCccceEEEEecc
Confidence 0 00011222236677 345666765 67665 68899999999999853
No 211
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.50 E-value=6e-12 Score=101.49 Aligned_cols=149 Identities=20% Similarity=0.381 Sum_probs=98.2
Q ss_pred EEEEECCCCCEEEEEeC---C-------CcEEEEEccCCceeeeEeec-cccCCeeEEEECCCCcEEEEe--eCCCcEEE
Q 018675 78 RSCAWSPSGKLLATASF---D-------ATTCIWEDVGGDYECVATLE-GHENEVKSVSWNASGTLLATC--GRDKSVWI 144 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~---d-------~~i~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~--~~d~~v~v 144 (352)
-.+.|+|+|+.|+.-.. | +...+|.....+ .....+. ...++|.+++|+|+|+.|+.. ..++.+.+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~-~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKN-IPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCC-CccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence 34568888877654332 1 234455442211 1122222 234579999999999986554 45679999
Q ss_pred EecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEE
Q 018675 145 WEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD---NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 221 (352)
Q Consensus 145 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~ 221 (352)
||++ . +.+..+ +...+..+.|+|+|++++.++.+ |.+.+||... ...+.+. .| ..+..++
T Consensus 88 yd~~-~---~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~-----~~~i~~~-----~~-~~~t~~~ 150 (194)
T PF08662_consen 88 YDVK-G---KKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK-----KKKISTF-----EH-SDATDVE 150 (194)
T ss_pred EcCc-c---cEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC-----CEEeecc-----cc-CcEEEEE
Confidence 9985 2 233333 24567889999999999998754 5699998763 2233322 23 3478999
Q ss_pred EcCCCCEEEEEeC------CCcEEEEcCC
Q 018675 222 FNAKGDKLVSCSD------DLTIKIWGAD 244 (352)
Q Consensus 222 ~~~~~~~l~s~~~------dg~i~iwd~~ 244 (352)
|+|+|++++++.. |+.++||+..
T Consensus 151 WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 151 WSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred EcCCCCEEEEEEeccceeccccEEEEEec
Confidence 9999999998874 7788999764
No 212
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.48 E-value=3.2e-13 Score=132.09 Aligned_cols=192 Identities=17% Similarity=0.311 Sum_probs=148.8
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCc
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
+.|.+.|.++.-||.+ ++.+||++||.+++|.+..+..+.... ..-+..|+.+.|+.+|.....+..||.
T Consensus 2205 k~~v~~v~r~~sHp~~------~~Yltgs~dgsv~~~~w~~~~~v~~~r----t~g~s~vtr~~f~~qGnk~~i~d~dg~ 2274 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSD------PYYLTGSQDGSVRMFEWGHGQQVVCFR----TAGNSRVTRSRFNHQGNKFGIVDGDGD 2274 (2439)
T ss_pred ecccCceeeecCCCCC------ceEEecCCCceEEEEeccCCCeEEEee----ccCcchhhhhhhcccCCceeeeccCCc
Confidence 3466788888888874 789999999999999998876544332 223478999999999999999999999
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee---CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG---RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~---~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
+.+|... ..+....++|+.....+.|-. ..+++++ .++.+.+||.........++ .+|...++++++-|.
T Consensus 2275 l~l~q~~---pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~ 2347 (2439)
T KOG1064|consen 2275 LSLWQAS---PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPK 2347 (2439)
T ss_pred eeecccC---CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCc
Confidence 9999754 245667789999999998865 5566664 56899999965433333444 679999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
.+.+++|+.+|.+++||+...+ .. |.-+. ++ ...++++|+..|.++||++..
T Consensus 2348 ~qllisggr~G~v~l~D~rqrq-----l~---------h~~~~----~~-~~~~f~~~ss~g~ikIw~~s~ 2399 (2439)
T KOG1064|consen 2348 HQLLISGGRKGEVCLFDIRQRQ-----LR---------HTFQA----LD-TREYFVTGSSEGNIKIWRLSE 2399 (2439)
T ss_pred ceEEEecCCcCcEEEeehHHHH-----HH---------HHhhh----hh-hhheeeccCcccceEEEEccc
Confidence 9999999999999999876431 11 22222 33 577899999999999998753
No 213
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.48 E-value=8.1e-11 Score=98.48 Aligned_cols=241 Identities=15% Similarity=0.235 Sum_probs=147.9
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC--c
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA--T 97 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~--~ 97 (352)
....++.+.|+-+ ...|..|+.|| .++|+.+...+.... ......|...-|+. .++|..+.+. .
T Consensus 4 ~~~ti~~~~~Nqd------~~~lsvGs~~G-yk~~~~~~~~k~~~~-----~~~~~~IvEmLFSS--SLvaiV~~~qpr~ 69 (391)
T KOG2110|consen 4 KKPTINFIGFNQD------STLLSVGSKDG-YKIFSCSPFEKCFSK-----DTEGVSIVEMLFSS--SLVAIVSIKQPRK 69 (391)
T ss_pred CCcceeeeeeccc------eeEEEccCCCc-eeEEecCchHHhhcc-----cCCCeEEEEeeccc--ceeEEEecCCCce
Confidence 3456677777765 34566666665 457776554321110 11122344445554 3555555443 4
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
+++++.......|-.. ....|-+|.++. ++|+.+-.+. |.|||+...+....+.....+...+..++.++.+.+
T Consensus 70 Lkv~~~Kk~~~ICe~~---fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~y 143 (391)
T KOG2110|consen 70 LKVVHFKKKTTICEIF---FPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCY 143 (391)
T ss_pred EEEEEcccCceEEEEe---cCCceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCce
Confidence 7777655443333222 346788888876 4666676655 999999765443333333345555666666666667
Q ss_pred EEE-Ee-CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCc-EEEEcCCccccccCCCC
Q 018675 178 LFS-CS-YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT-IKIWGADITRMQSGDGY 254 (352)
Q Consensus 178 l~s-~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~ 254 (352)
++- ++ ..|.|.+||..+. +....+. +|.+++.+|+|+++|.+|||+++.|+ ||||.+...
T Consensus 144 lAyp~s~t~GdV~l~d~~nl-----~~v~~I~----aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G-------- 206 (391)
T KOG2110|consen 144 LAYPGSTTSGDVVLFDTINL-----QPVNTIN----AHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEG-------- 206 (391)
T ss_pred EEecCCCCCceEEEEEcccc-----eeeeEEE----ecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCc--------
Confidence 663 22 3578999976543 2233332 79999999999999999999999986 677754210
Q ss_pred ccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceE
Q 018675 255 ASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLL 334 (352)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l 334 (352)
+ +++.. ..-.. -..|.+++|+|+++ +|
T Consensus 207 --------------~----------------------kl~eF--------------RRG~~--~~~IySL~Fs~ds~-~L 233 (391)
T KOG2110|consen 207 --------------Q----------------------KLYEF--------------RRGTY--PVSIYSLSFSPDSQ-FL 233 (391)
T ss_pred --------------c----------------------Eeeee--------------eCCce--eeEEEEEEECCCCC-eE
Confidence 0 11100 00000 23589999999986 78
Q ss_pred EEecCCCeEEEEeecc
Q 018675 335 ASASDDGMIKIWELAN 350 (352)
Q Consensus 335 ~s~~~Dg~i~iw~~~~ 350 (352)
+..|..++|+||++++
T Consensus 234 ~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 234 AASSNTETVHIFKLEK 249 (391)
T ss_pred EEecCCCeEEEEEecc
Confidence 8888899999999875
No 214
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.45 E-value=3.8e-13 Score=115.28 Aligned_cols=221 Identities=15% Similarity=0.208 Sum_probs=155.2
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
|.+++-++.-|.|..+|+.+..-. +. ..-...|.++.|-.+.+++|++ ..+.+.|||-.+.+..| ++. .
T Consensus 141 GrhlllgGrKGHlAa~Dw~t~~L~--~E----i~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~GtElHC---lk~-~ 209 (545)
T KOG1272|consen 141 GRHLLLGGRKGHLAAFDWVTKKLH--FE----INVMETVRDVTFLHNEQFFAVA-QKKYVYVYDNNGTELHC---LKR-H 209 (545)
T ss_pred ccEEEecCCccceeeeecccceee--ee----eehhhhhhhhhhhcchHHHHhh-hhceEEEecCCCcEEee---hhh-c
Confidence 678999999999999998765321 11 1123578888998888888765 56678888865544333 333 3
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 198 (352)
..|..+.|-|-.-+|++++..|.++.-|+..++. +..+..-...+..+.-.|-...+-+|...|+|.+|.....
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gkl---Va~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~sk--- 283 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKL---VASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSK--- 283 (545)
T ss_pred CchhhhcccchhheeeecccCCceEEEeechhhh---hHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCc---
Confidence 5789999999988999999999999999876653 3333334455666677787778889999999999943322
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR 278 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 278 (352)
........|.++|.+|++.++|.|+||.|.|..++|||++.... ..+... .-....+++++
T Consensus 284 ------ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~q-----------l~t~~t--p~~a~~ls~Sq 344 (545)
T KOG1272|consen 284 ------EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQ-----------LHTYRT--PHPASNLSLSQ 344 (545)
T ss_pred ------chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccc-----------cceeec--CCCcccccccc
Confidence 11122236899999999999999999999999999999875321 111111 11234456677
Q ss_pred CceEEecCCCCeEEEEEc
Q 018675 279 EGIIASGAADDSVQFFVE 296 (352)
Q Consensus 279 ~~~~~s~~~d~~v~~~~~ 296 (352)
.+++|.+ ....+.+|..
T Consensus 345 kglLA~~-~G~~v~iw~d 361 (545)
T KOG1272|consen 345 KGLLALS-YGDHVQIWKD 361 (545)
T ss_pred ccceeee-cCCeeeeehh
Confidence 7766654 4456778843
No 215
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.45 E-value=1.1e-10 Score=97.51 Aligned_cols=205 Identities=21% Similarity=0.299 Sum_probs=127.9
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeee--------eeeeeecceecceEEEEECCCCCEEEEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN--------CKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~--------~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
...|+|++|.|.. ...|+.|... -|.+|..+....... ..+.++.-...+|++++|.+||..++++
T Consensus 140 QrnvtclawRPls-----aselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tA 213 (445)
T KOG2139|consen 140 QRNVTCLAWRPLS-----ASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTA 213 (445)
T ss_pred hcceeEEEeccCC-----cceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeec
Confidence 4589999999974 3566666554 577897654321111 0111222123689999999999999999
Q ss_pred eC-CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 93 SF-DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 93 ~~-d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
+. |..|.|||..++...++.- .--+.+.-+.|+|++..|+++.-|+..++|........+. .......|....|
T Consensus 214 S~gsssi~iWdpdtg~~~pL~~--~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~er---w~lgsgrvqtacW 288 (445)
T KOG2139|consen 214 SFGSSSIMIWDPDTGQKIPLIP--KGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKER---WILGSGRVQTACW 288 (445)
T ss_pred ccCcceEEEEcCCCCCcccccc--cCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecc---eeccCCceeeeee
Confidence 86 5689999988776544432 2346788999999999999999999999997543322221 1122347899999
Q ss_pred cCCCCEEE-EEeCCCcEEEEecCCCCCCC-----ceeE---eeeecc--C---CCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 172 HPTMDVLF-SCSYDNTIKVWWAEDTDSDN-----WHCV---QTISES--N---NGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 172 ~~~~~~l~-s~~~d~~i~iw~~~~~~~~~-----~~~~---~~~~~~--~---~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
+|.|.+|+ +.+....+.-..+...+... .+.. ..+.+. . .-..+++.+++|+|.|.+||+.-..+
T Consensus 289 spcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~ 367 (445)
T KOG2139|consen 289 SPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQ 367 (445)
T ss_pred cCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCC
Confidence 99998754 44433333222221111100 0011 111100 0 01245788999999999999876543
No 216
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.45 E-value=1.2e-09 Score=90.00 Aligned_cols=238 Identities=14% Similarity=0.235 Sum_probs=140.7
Q ss_pred EEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE-EEeCC------Cc
Q 018675 25 WSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA-TASFD------AT 97 (352)
Q Consensus 25 ~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~d------~~ 97 (352)
.+++|+-+. ..|+ ++.|.-.|+|+.+.-++.. .+..+...+.-+..---.++|| .|+.. ++
T Consensus 9 lsvs~NQD~------ScFa-va~~~Gfriyn~~P~ke~~-----~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNk 76 (346)
T KOG2111|consen 9 LSVSFNQDH------SCFA-VATDTGFRIYNCDPFKESA-----SRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNK 76 (346)
T ss_pred eEEEEccCC------ceEE-EEecCceEEEecCchhhhh-----hhccccCchhhhhHhhhhceEEEecCCCCCCCCCce
Confidence 348888764 2444 4567778999886532110 0011111110000000123333 34433 47
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe-eEEEEEeecCccCeeEEEEcCCCC
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
+.|||+... .++.++. ...+|.+|.+.++ +++..- .+.|.||....... ..++.+ .......+++.-+....
T Consensus 77 viIWDD~k~--~~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et-~~NPkGlC~~~~~~~k~ 149 (346)
T KOG2111|consen 77 VIIWDDLKE--RCIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIET-RSNPKGLCSLCPTSNKS 149 (346)
T ss_pred EEEEecccC--cEEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeec-ccCCCceEeecCCCCce
Confidence 899996544 4555554 5789999999875 555554 46799998753322 222222 22233444433222333
Q ss_pred EEE-EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCc-EEEEcCCccccccCCCC
Q 018675 177 VLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT-IKIWGADITRMQSGDGY 254 (352)
Q Consensus 177 ~l~-s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~ 254 (352)
.|+ .|-.-|.|.|-++.....+. .. ...+|.+.|.+++.+.+|..+||++..|+ |||||........
T Consensus 150 ~LafPg~k~GqvQi~dL~~~~~~~---p~----~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~---- 218 (346)
T KOG2111|consen 150 LLAFPGFKTGQVQIVDLASTKPNA---PS----IINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQ---- 218 (346)
T ss_pred EEEcCCCccceEEEEEhhhcCcCC---ce----EEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEee----
Confidence 333 45567899998876654321 11 22489999999999999999999999996 8999875432110
Q ss_pred ccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 255 ASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
+ ---+.....+++++++++. .++++|..|++.++....
T Consensus 219 ----E--~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 219 ----E--LRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred ----e--eecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 0 0113345679999999986 677788889999996544
No 217
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.44 E-value=3.3e-11 Score=97.18 Aligned_cols=111 Identities=23% Similarity=0.506 Sum_probs=83.0
Q ss_pred eecceEEEEECCCCCEEEE--EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC---CcEEEEec
Q 018675 73 HTRTVRSCAWSPSGKLLAT--ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD---KSVWIWEV 147 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s--~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~v~vwd~ 147 (352)
..++|.+++|+|+|+.+|+ |..++.+.+||... ..+..+. ...++.+.|+|+|++|++++.+ |.|.+||+
T Consensus 58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~---~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~ 132 (194)
T PF08662_consen 58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKG---KKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDV 132 (194)
T ss_pred CCCceEEEEECcCCCEEEEEEccCCcccEEEcCcc---cEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEEC
Confidence 3457999999999998654 44677999998752 3344443 4678899999999999998754 56999998
Q ss_pred CCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC------CCcEEEEecC
Q 018675 148 MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY------DNTIKVWWAE 193 (352)
Q Consensus 148 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------d~~i~iw~~~ 193 (352)
... +.+... +...++.++|+|+++++++++. |+.++||+..
T Consensus 133 ~~~---~~i~~~--~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 133 RKK---KKISTF--EHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred CCC---EEeecc--ccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 643 333333 2335789999999999998864 6788888654
No 218
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.42 E-value=3.4e-12 Score=111.38 Aligned_cols=169 Identities=17% Similarity=0.276 Sum_probs=110.7
Q ss_pred EEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEEEEeCCCcEEEEEccC--------------C
Q 018675 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLATASFDATTCIWEDVG--------------G 106 (352)
Q Consensus 42 l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~i~~~~~--------------~ 106 (352)
++.+-.-|.|.+.+..... +.+.-..-....+..|+++.|-|.+ ..++.+-.+|.+.+||... +
T Consensus 188 llIGf~tGqvq~idp~~~~-~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~ 266 (636)
T KOG2394|consen 188 LLIGFTTGQVQLIDPINFE-VSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDG 266 (636)
T ss_pred eEEeeccCceEEecchhhH-HHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCC
Confidence 4555566777777654321 1110000011234789999999855 4455566789998886321 0
Q ss_pred ce------------eeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 107 DY------------ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 107 ~~------------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
+. .++..+.--.+.|+.++|+|||.+||+.+.||.++|+|..... .+...+.--....|++|+||
T Consensus 267 ~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~e---Llg~mkSYFGGLLCvcWSPD 343 (636)
T KOG2394|consen 267 DQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQE---LLGVMKSYFGGLLCVCWSPD 343 (636)
T ss_pred CeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHH---HHHHHHhhccceEEEEEcCC
Confidence 00 0111122224578899999999999999999999999975432 22223333457899999999
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
++++++|++|..|.+|.+.+.. ....-.||.++|..|+|+
T Consensus 344 GKyIvtGGEDDLVtVwSf~erR---------VVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 344 GKYIVTGGEDDLVTVWSFEERR---------VVARGQGHKSWVSVVAFD 383 (636)
T ss_pred ccEEEecCCcceEEEEEeccce---------EEEeccccccceeeEeec
Confidence 9999999999999999765431 112234789999999988
No 219
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.41 E-value=4.5e-10 Score=102.42 Aligned_cols=234 Identities=16% Similarity=0.208 Sum_probs=135.3
Q ss_pred eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC---CCcEEEEEccCCceeeeEeeccccCCeeEEEE
Q 018675 50 TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF---DATTCIWEDVGGDYECVATLEGHENEVKSVSW 126 (352)
Q Consensus 50 ~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 126 (352)
.|.+||.+.... ... ..+...+.+.+|+|||+.|+..+. +..+.+|+..+++...+.... +.+..+.|
T Consensus 180 ~l~~~d~dg~~~----~~l--t~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~---~~~~~~~~ 250 (429)
T PRK03629 180 ELRVSDYDGYNQ----FVV--HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP---RHNGAPAF 250 (429)
T ss_pred eEEEEcCCCCCC----EEe--ecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCC---CCcCCeEE
Confidence 577777654321 111 124567889999999999887653 346888887766544443333 34556899
Q ss_pred CCCCcEEEEe-eCCC--cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCC-CcEEEEecCCCCCCCcee
Q 018675 127 NASGTLLATC-GRDK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-NTIKVWWAEDTDSDNWHC 202 (352)
Q Consensus 127 ~~~~~~l~s~-~~d~--~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-~~i~iw~~~~~~~~~~~~ 202 (352)
+|+|+.|+.. +.++ .|.+||+..+.. ..+..+...+....|+|+++.++..+.+ +...+|.+.... ..
T Consensus 251 SPDG~~La~~~~~~g~~~I~~~d~~tg~~----~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~-g~--- 322 (429)
T PRK03629 251 SPDGSKLAFALSKTGSLNLYVMDLASGQI----RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING-GA--- 322 (429)
T ss_pred CCCCCEEEEEEcCCCCcEEEEEECCCCCE----EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC-CC---
Confidence 9999987754 4444 588889865432 2223334456788999999988766653 455666432111 11
Q ss_pred EeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC-C--cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC
Q 018675 203 VQTISESNNGHSSTIWALSFNAKGDKLVSCSDD-L--TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE 279 (352)
Q Consensus 203 ~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 279 (352)
...+. ..........|+|+|++|+..+.+ + .|.+||++.... +. +... .......|+|+
T Consensus 323 ~~~lt----~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~---------~~---Lt~~--~~~~~p~~SpD 384 (429)
T PRK03629 323 PQRIT----WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV---------QV---LTDT--FLDETPSIAPN 384 (429)
T ss_pred eEEee----cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe---------EE---eCCC--CCCCCceECCC
Confidence 11221 112234567899999998876543 3 467777643211 11 1110 11224567887
Q ss_pred c-eEEecCCCCe---EEEEEccCCccccCcccceeeecccccCcceeEEEecC
Q 018675 280 G-IIASGAADDS---VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 328 (352)
Q Consensus 280 ~-~~~s~~~d~~---v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 328 (352)
+ +++..+.++. +.++.... .......+|.+.+...+|+|
T Consensus 385 G~~i~~~s~~~~~~~l~~~~~~G----------~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 385 GTMVIYSSSQGMGSVLNLVSTDG----------RFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred CCEEEEEEcCCCceEEEEEECCC----------CCeEECccCCCCcCCcccCC
Confidence 7 4555555543 33333221 11223446778889999987
No 220
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.41 E-value=1.4e-11 Score=115.40 Aligned_cols=190 Identities=18% Similarity=0.281 Sum_probs=141.2
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
.++++....++.+-+|+......+.+..... .---....-+.++++.-++++|+.-+.+.+|+... +..+. .+.+|.
T Consensus 99 ~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~e-r~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~-dn~p~-~l~GHe 175 (967)
T KOG0974|consen 99 NKKIALVTSRNSLLIRDSKNSSVLSKIQSDE-RCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHE-DNKPI-RLKGHE 175 (967)
T ss_pred cceEEEEEcCceEEEEecccCceehhcCCCc-eEEEEeEEEEeccCcEEEEEeccccccEEEEeccc-cCCcc-eecccC
Confidence 3677888888899999876543322111100 00011223345677888899999999999998763 22233 578999
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 198 (352)
+.+.++.|+.+|.+++++|+|+++++|++...+... ....+|+..++.+.++|. .++++++|-+.++|......
T Consensus 176 G~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~--~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~~-- 249 (967)
T KOG0974|consen 176 GSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG--CTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNGTQ-- 249 (967)
T ss_pred CceEEEEEccCCcEEEEEecCcceeeeecccccccC--cccccccceeEEEEeccc--eeEEeccceEEEEEecccce--
Confidence 999999999999999999999999999997655332 356789999999999998 89999999999999554321
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
++.........|+.+...++....+|++.|+.+++|++.
T Consensus 250 -------l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 250 -------LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN 288 (967)
T ss_pred -------ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence 111111224579999999999999999999999999864
No 221
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.39 E-value=8.4e-11 Score=99.07 Aligned_cols=194 Identities=9% Similarity=0.141 Sum_probs=137.7
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEEEEeCC--CcEEEEEccCCceeeeEeecc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLATASFD--ATTCIWEDVGGDYECVATLEG 116 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d--~~i~i~~~~~~~~~~~~~~~~ 116 (352)
..|++|-.+|.+++|....+...... ..+..-...+..+.-++.. .++|+|+.. ..+.+||..+.. .+..-+.
T Consensus 116 g~Litc~~sG~l~~~~~k~~d~hss~--l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~--qiw~aKN 191 (412)
T KOG3881|consen 116 GTLITCVSSGNLQVRHDKSGDLHSSK--LIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSK--QIWSAKN 191 (412)
T ss_pred CEEEEEecCCcEEEEeccCCcccccc--ceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccce--eeeeccC
Confidence 46899999999999987644211111 1111112455666666644 456679988 889999987652 2221111
Q ss_pred c---------cCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC
Q 018675 117 H---------ENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 185 (352)
Q Consensus 117 h---------~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 185 (352)
- .-.++++.|-+. ...|+++..-+.+++||.+.++ .++..+.--..+++++...|.++++++|..-+
T Consensus 192 vpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR--RPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g 269 (412)
T KOG3881|consen 192 VPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR--RPVAQFDFLENPISSTGLTPSGNFIYTGNTKG 269 (412)
T ss_pred CCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccC--cceeEeccccCcceeeeecCCCcEEEEecccc
Confidence 0 012457788776 7789999999999999987554 34555555567899999999999999999999
Q ss_pred cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 186 ~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
.+..+|.+... .+.-...+..+.|.+|..+|.++++++||-|..|||+|++..+
T Consensus 270 ~l~~FD~r~~k--------l~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 270 QLAKFDLRGGK--------LLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRK 323 (412)
T ss_pred hhheecccCce--------eeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccch
Confidence 99999876532 1112234677899999999999999999999999999987543
No 222
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.38 E-value=5.1e-08 Score=86.48 Aligned_cols=283 Identities=14% Similarity=0.200 Sum_probs=166.7
Q ss_pred CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC----CCcEEEEEccC--CceeeeEeeccccCCee
Q 018675 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF----DATTCIWEDVG--GDYECVATLEGHENEVK 122 (352)
Q Consensus 49 ~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----d~~i~i~~~~~--~~~~~~~~~~~h~~~v~ 122 (352)
+.|.+|+++.....+....... -.....-++++|++++|-+... ++.|..|.... +....+...........
T Consensus 13 ~gI~~~~~d~~~g~l~~~~~~~--~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~ 90 (345)
T PF10282_consen 13 GGIYVFRFDEETGTLTLVQTVA--EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPC 90 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEEEE--ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEE
T ss_pred CcEEEEEEcCCCCCceEeeeec--CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcE
Confidence 6888887743332222222211 1234466889999999888776 46888887654 45555554443345567
Q ss_pred EEEECCCCcEEEEee-CCCcEEEEecCCCCeeEEE-EEee--c--------CccCeeEEEEcCCCCEEEEEeC-CCcEEE
Q 018675 123 SVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECV-SVLQ--G--------HAQDVKMVQWHPTMDVLFSCSY-DNTIKV 189 (352)
Q Consensus 123 ~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~-~~~~--~--------h~~~v~~~~~~~~~~~l~s~~~-d~~i~i 189 (352)
.++++|++.+|+++. .++++.++++......... .... + ......++.++|+++++++... ...|.+
T Consensus 91 ~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~ 170 (345)
T PF10282_consen 91 HIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYV 170 (345)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred EEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEE
Confidence 899999999988887 4899999999764333222 1121 0 1133568899999998877643 457888
Q ss_pred EecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE-EeCCCcEEEEcCCccccccCCCCccceeeEEeec---
Q 018675 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS-CSDDLTIKIWGADITRMQSGDGYASWRHLCTISG--- 265 (352)
Q Consensus 190 w~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--- 265 (352)
|++..... .+.....+. ...+.....+.|+|+++++.. .-.+++|.+++++... ..+.....+..
T Consensus 171 ~~~~~~~~-~l~~~~~~~---~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~-------g~~~~~~~~~~~~~ 239 (345)
T PF10282_consen 171 YDIDDDTG-KLTPVDSIK---VPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSD-------GSLTEIQTISTLPE 239 (345)
T ss_dssp EEE-TTS--TEEEEEEEE---CSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTT-------TEEEEEEEEESCET
T ss_pred EEEeCCCc-eEEEeeccc---cccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccC-------CceeEEEEeeeccc
Confidence 87754321 121112221 123456788999999988754 4567889999765110 01112211111
Q ss_pred -cc-CcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCC
Q 018675 266 -YH-DRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG 341 (352)
Q Consensus 266 -~~-~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg 341 (352)
.. ......+.+++++ .+++.-..+.|.+|...... + ... .+.........-..++++|++++++++...++
T Consensus 240 ~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~---g-~l~-~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~ 314 (345)
T PF10282_consen 240 GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPAT---G-TLT-LVQTVPTGGKFPRHFAFSPDGRYLYVANQDSN 314 (345)
T ss_dssp TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTT---T-TEE-EEEEEEESSSSEEEEEE-TTSSEEEEEETTTT
T ss_pred cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCC---C-ceE-EEEEEeCCCCCccEEEEeCCCCEEEEEecCCC
Confidence 11 1246677888877 45566667788888763211 0 011 11112222334789999999999888888999
Q ss_pred eEEEEeec
Q 018675 342 MIKIWELA 349 (352)
Q Consensus 342 ~i~iw~~~ 349 (352)
.|.+|++.
T Consensus 315 ~v~vf~~d 322 (345)
T PF10282_consen 315 TVSVFDID 322 (345)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999884
No 223
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.36 E-value=5e-10 Score=106.90 Aligned_cols=261 Identities=17% Similarity=0.205 Sum_probs=152.0
Q ss_pred ceecceEEEEECCC-CCEEEEEeCCCcEEEEEccC-----CceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEE
Q 018675 72 MHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVG-----GDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW 145 (352)
Q Consensus 72 ~h~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~~~-----~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vw 145 (352)
.|...|..++.++. +.++++|+.||+|++|+... +......+.......+.++...+.++.+|.++.||.|.+.
T Consensus 1046 Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~ 1125 (1431)
T KOG1240|consen 1046 EHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVL 1125 (1431)
T ss_pred hccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEE
Confidence 46777888887765 49999999999999998642 2233344444346789999999999999999999999999
Q ss_pred ecCCCC--eeE--EEEEeecCcc-CeeEE-EEcC-CCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccE
Q 018675 146 EVMPGN--EFE--CVSVLQGHAQ-DVKMV-QWHP-TMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217 (352)
Q Consensus 146 d~~~~~--~~~--~~~~~~~h~~-~v~~~-~~~~-~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i 217 (352)
++.... ... +......+.. .+.++ ++.. ... .++.+..-+.|..||.+.. .+-| ++... ..| +.|
T Consensus 1126 ~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~-~~~w----~lk~~-~~h-G~v 1198 (1431)
T KOG1240|consen 1126 RIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMR-HDAW----RLKNQ-LRH-GLV 1198 (1431)
T ss_pred EccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhh-hhHH----hhhcC-ccc-cce
Confidence 985421 111 1112222222 22222 2221 233 6777778889999986542 1112 22111 123 579
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC--C--ce-EEecC-CCCeE
Q 018675 218 WALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR--E--GI-IASGA-ADDSV 291 (352)
Q Consensus 218 ~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~--~~-~~s~~-~d~~v 291 (352)
++++.+|-+..++.|+..|.+.+||++..... ..|... +...+..+...+ . .. +.+++ ..+.+
T Consensus 1199 TSi~idp~~~WlviGts~G~l~lWDLRF~~~i-----~sw~~P------~~~~i~~v~~~~~~~~~S~~vs~~~~~~nev 1267 (1431)
T KOG1240|consen 1199 TSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPI-----LSWEHP------ARAPIRHVWLCPTYPQESVSVSAGSSSNNEV 1267 (1431)
T ss_pred eEEEecCCceEEEEecCCceEEEEEeecCcee-----ecccCc------ccCCcceEEeeccCCCCceEEEecccCCCce
Confidence 99999999999999999999999998743221 223211 122233333222 2 23 33333 46667
Q ss_pred EEEEccCCccc----cC-ccc----ceeee-cccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 292 QFFVESKDDLI----DG-PSY----KMLLK-KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 292 ~~~~~~~~~~~----~~-~~~----~~~~~-~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
-+|....+... .. ... ..... ....+.-......+. ++..++.|||.|..||.||..++
T Consensus 1268 s~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~-~~~~~~ltggsd~kIR~wD~~~p 1336 (1431)
T KOG1240|consen 1268 STWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVC-EKNGFLLTGGSDMKIRKWDPTRP 1336 (1431)
T ss_pred eeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecc-cCCceeeecCCccceeeccCCCc
Confidence 77754432110 00 000 00000 000222222333333 23347789999999999998764
No 224
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.35 E-value=1.3e-10 Score=96.47 Aligned_cols=267 Identities=15% Similarity=0.256 Sum_probs=158.9
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce-eeeeeeeeec-----------ceecceEEEEECCCC-
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR-FWNCKAVLEE-----------MHTRTVRSCAWSPSG- 86 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~-~~~~~~~~~~-----------~h~~~v~~~~~s~~~- 86 (352)
-.+-|.+|.|... |.+||||..+|.|-++.-..... .+.....+.. .-...|+.+.|.+++
T Consensus 24 eadiis~vef~~~------Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n 97 (433)
T KOG1354|consen 24 EADIISAVEFDHY------GERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGN 97 (433)
T ss_pred hhcceeeEEeecc------cceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCC
Confidence 4567889999876 68999999999999996543221 1111111100 113467888998765
Q ss_pred -CEEEEEeCCCcEEEEEccCCcee---------------------------------eeEe-eccccCCeeEEEECCCCc
Q 018675 87 -KLLATASFDATTCIWEDVGGDYE---------------------------------CVAT-LEGHENEVKSVSWNASGT 131 (352)
Q Consensus 87 -~~l~s~~~d~~i~i~~~~~~~~~---------------------------------~~~~-~~~h~~~v~~v~~~~~~~ 131 (352)
..++....|.+|++|........ +... -.+|+-.|++++++.|++
T Consensus 98 ~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~E 177 (433)
T KOG1354|consen 98 LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKE 177 (433)
T ss_pred ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccc
Confidence 35677789999999975321110 0011 135788899999999999
Q ss_pred EEEEeeCCCcEEEEecCCCCeeEEEEEeecCc-----cCeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCC-ceeEe
Q 018675 132 LLATCGRDKSVWIWEVMPGNEFECVSVLQGHA-----QDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDN-WHCVQ 204 (352)
Q Consensus 132 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~-~~~~~ 204 (352)
.++++ +|-.|.+|.+......-.+-.++.+. .-|++..|||... .++-.+..|+|++.|++....-. ...+-
T Consensus 178 t~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlf 256 (433)
T KOG1354|consen 178 TFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLF 256 (433)
T ss_pred eEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhh
Confidence 88865 56789999975433222222233322 2367888999765 45666778999999987421100 00000
Q ss_pred eeeccC------CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc--cCCCCccc-eeeEEeecccCcce---E
Q 018675 205 TISESN------NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ--SGDGYASW-RHLCTISGYHDRTI---F 272 (352)
Q Consensus 205 ~~~~~~------~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~i---~ 272 (352)
...+.. ..-...|..+.|+++|+|+++-. =-+|++||+++.... ...-+... ..++.+ +....| +
T Consensus 257 Eepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc~l--YEnD~IfdKF 333 (433)
T KOG1354|consen 257 EEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLCSL--YENDAIFDKF 333 (433)
T ss_pred ccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHHHHHHH--hhccchhhee
Confidence 000000 01134677899999999998754 268999998653210 00000000 001111 112222 3
Q ss_pred EEEecCC-ceEEecCCCCeEEEEEc
Q 018675 273 SVHWSRE-GIIASGAADDSVQFFVE 296 (352)
Q Consensus 273 ~~~~~~~-~~~~s~~~d~~v~~~~~ 296 (352)
.++|+.+ .++++|+..+..+++..
T Consensus 334 ec~~sg~~~~v~TGsy~n~frvf~~ 358 (433)
T KOG1354|consen 334 ECSWSGNDSYVMTGSYNNVFRVFNL 358 (433)
T ss_pred EEEEcCCcceEecccccceEEEecC
Confidence 4667765 48999999999999973
No 225
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.33 E-value=1.8e-09 Score=98.42 Aligned_cols=197 Identities=15% Similarity=0.166 Sum_probs=120.2
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEee---CCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE-e
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCS---GDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA-S 93 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s---~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~ 93 (352)
..+.+.+.+..|+|+ ++.|+..+ .+..+.+|++.+++. .... ...+.+....|+|||+.|+.. +
T Consensus 195 t~~~~~~~~p~wSPD------G~~la~~s~~~g~~~i~i~dl~~G~~----~~l~--~~~~~~~~~~~SPDG~~La~~~~ 262 (429)
T PRK03629 195 HRSPQPLMSPAWSPD------GSKLAYVTFESGRSALVIQTLANGAV----RQVA--SFPRHNGAPAFSPDGSKLAFALS 262 (429)
T ss_pred ecCCCceeeeEEcCC------CCEEEEEEecCCCcEEEEEECCCCCe----EEcc--CCCCCcCCeEECCCCCEEEEEEc
Confidence 345567889999997 45666544 345788888876532 1111 122334568999999988754 4
Q ss_pred CCC--cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-CcEEEE--ecCCCCeeEEEEEeecCccCeeE
Q 018675 94 FDA--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-KSVWIW--EVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 94 ~d~--~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-~~v~vw--d~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
.++ .|.+||..+++.. .+..+...+....|+|+|+.|+..+.+ +...+| ++..+.. . .+..+......
T Consensus 263 ~~g~~~I~~~d~~tg~~~---~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~---~lt~~~~~~~~ 335 (429)
T PRK03629 263 KTGSLNLYVMDLASGQIR---QVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-Q---RITWEGSQNQD 335 (429)
T ss_pred CCCCcEEEEEECCCCCEE---EccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-E---EeecCCCCccC
Confidence 444 4777887666433 233344567889999999988776654 455555 4433321 1 12222334456
Q ss_pred EEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCc---EEEEc
Q 018675 169 VQWHPTMDVLFSCSYD---NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT---IKIWG 242 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~---i~iwd 242 (352)
..|+|+++.++..+.+ ..|.+|++.... . ..+.. .+ ...+..|+|||++|+..+.++. +.+++
T Consensus 336 ~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~---~---~~Lt~---~~--~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~ 404 (429)
T PRK03629 336 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---V---QVLTD---TF--LDETPSIAPNGTMVIYSSSQGMGSVLNLVS 404 (429)
T ss_pred EEECCCCCEEEEEEccCCCceEEEEECCCCC---e---EEeCC---CC--CCCCceECCCCCEEEEEEcCCCceEEEEEE
Confidence 8899999988776543 246777764332 1 12211 11 1235679999999998887764 55555
Q ss_pred CC
Q 018675 243 AD 244 (352)
Q Consensus 243 ~~ 244 (352)
++
T Consensus 405 ~~ 406 (429)
T PRK03629 405 TD 406 (429)
T ss_pred CC
Confidence 43
No 226
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.33 E-value=3.1e-10 Score=93.76 Aligned_cols=274 Identities=15% Similarity=0.329 Sum_probs=162.2
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC-c
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA-T 97 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~-~ 97 (352)
.-...+.+++|+|+. ...|.+..-|-.+.+|.+.+.+... + ..-+..+..++|+|||++.+..+.-. .
T Consensus 89 eg~agls~~~WSPdg-----rhiL~tseF~lriTVWSL~t~~~~~-----~-~~pK~~~kg~~f~~dg~f~ai~sRrDCk 157 (447)
T KOG4497|consen 89 EGQAGLSSISWSPDG-----RHILLTSEFDLRITVWSLNTQKGYL-----L-PHPKTNVKGYAFHPDGQFCAILSRRDCK 157 (447)
T ss_pred cCCCcceeeeECCCc-----ceEeeeecceeEEEEEEeccceeEE-----e-cccccCceeEEECCCCceeeeeecccHH
Confidence 345678899999984 3678888889999999987754321 1 11224568889999999988776321 0
Q ss_pred --EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC
Q 018675 98 --TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 98 --i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 175 (352)
+.|.. -..+.....++--+-..+.+.|+|+|+.|+ |||-.-. ++.. .+. -...+..+.|+|.+
T Consensus 158 dyv~i~~--c~~W~ll~~f~~dT~DltgieWsPdg~~la---------Vwd~~Le--ykv~-aYe-~~lG~k~v~wsP~~ 222 (447)
T KOG4497|consen 158 DYVQISS--CKAWILLKEFKLDTIDLTGIEWSPDGNWLA---------VWDNVLE--YKVY-AYE-RGLGLKFVEWSPCN 222 (447)
T ss_pred HHHHHHh--hHHHHHHHhcCCCcccccCceECCCCcEEE---------Eecchhh--heee-eee-eccceeEEEecccc
Confidence 11110 011112222222334567899999998765 6774211 1111 111 12468899999999
Q ss_pred CEEEEEeCCCcEEEEecCC-----C--------CCC--------------CceeE-------------------------
Q 018675 176 DVLFSCSYDNTIKVWWAED-----T--------DSD--------------NWHCV------------------------- 203 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~-----~--------~~~--------------~~~~~------------------------- 203 (352)
++++.|+.|+.+++.+--. . +.. ...++
T Consensus 223 qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~p 302 (447)
T KOG4497|consen 223 QFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTP 302 (447)
T ss_pred ceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcc
Confidence 9999999999888752100 0 000 00000
Q ss_pred ---eeeec--cCCCCcccEEEEEEcCCCCEEEEEeCC--CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEe
Q 018675 204 ---QTISE--SNNGHSSTIWALSFNAKGDKLVSCSDD--LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHW 276 (352)
Q Consensus 204 ---~~~~~--~~~~h~~~i~~l~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 276 (352)
+.+.. ....-...+--++|++|..|+++-.+. +.+-+||++..+..... .....|..+.|
T Consensus 303 v~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-------------iQk~piraf~W 369 (447)
T KOG4497|consen 303 VKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL-------------IQKHPIRAFEW 369 (447)
T ss_pred eeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh-------------hhccceeEEEe
Confidence 00000 000012345568999999999887643 57889988654432110 01235788899
Q ss_pred cCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCe
Q 018675 277 SREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGM 342 (352)
Q Consensus 277 ~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~ 342 (352)
+|.. .++.+.....+++|..+. ...+... +-.-.|..+.|+-+|.. ++-.++|..
T Consensus 370 dP~~prL~vctg~srLY~W~psg---------~~~V~vP-~~GF~i~~l~W~~~g~~-i~l~~kDaf 425 (447)
T KOG4497|consen 370 DPGRPRLVVCTGKSRLYFWAPSG---------PRVVGVP-KKGFNIQKLQWLQPGEF-IVLCGKDAF 425 (447)
T ss_pred CCCCceEEEEcCCceEEEEcCCC---------ceEEecC-CCCceeeeEEecCCCcE-EEEEcCCce
Confidence 9875 566665566688886653 1222221 22367999999988874 667888753
No 227
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.33 E-value=1.3e-10 Score=95.91 Aligned_cols=190 Identities=17% Similarity=0.316 Sum_probs=119.5
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCE-EEEEeCCCcEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL-LATASFDATTC 99 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~d~~i~ 99 (352)
-+.|.-+.|..+. .-.+-....|+.|.+|++...+ |.++- ......+.++.|||||+. |.+...|-.|.
T Consensus 48 ldki~yieW~ads-----~~ilC~~yk~~~vqvwsl~Qpe--w~ckI---deg~agls~~~WSPdgrhiL~tseF~lriT 117 (447)
T KOG4497|consen 48 LDKIVYIEWKADS-----CHILCVAYKDPKVQVWSLVQPE--WYCKI---DEGQAGLSSISWSPDGRHILLTSEFDLRIT 117 (447)
T ss_pred HHHhhheeeeccc-----eeeeeeeeccceEEEEEeecce--eEEEe---ccCCCcceeeeECCCcceEeeeecceeEEE
Confidence 3677778888764 2344555788999999987553 33321 223567899999999965 55677899999
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
+|...+.....+ +--...+..++|+|+|++.+-+++........+...+....+..+.-.+...+.+.|+|++..++
T Consensus 118 VWSL~t~~~~~~---~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~la 194 (447)
T KOG4497|consen 118 VWSLNTQKGYLL---PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLA 194 (447)
T ss_pred EEEeccceeEEe---cccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEE
Confidence 998776532222 21223568899999999877776532111222211111222223334455678889999988765
Q ss_pred EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 180 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
+ ||.--. ..+... ..+-.+..++|+|.+++|+.|+.|+.+|+-+
T Consensus 195 V---------wd~~Le-----ykv~aY-----e~~lG~k~v~wsP~~qflavGsyD~~lrvln 238 (447)
T KOG4497|consen 195 V---------WDNVLE-----YKVYAY-----ERGLGLKFVEWSPCNQFLAVGSYDQMLRVLN 238 (447)
T ss_pred E---------ecchhh-----heeeee-----eeccceeEEEeccccceEEeeccchhhhhhc
Confidence 4 431100 000001 1124578899999999999999999998854
No 228
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.33 E-value=9.2e-10 Score=100.42 Aligned_cols=160 Identities=18% Similarity=0.210 Sum_probs=101.6
Q ss_pred eecceEEEEECCCCCEEEEEeCC---CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCCCcEEEEecC
Q 018675 73 HTRTVRSCAWSPSGKLLATASFD---ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKSVWIWEVM 148 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d---~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~v~vwd~~ 148 (352)
+...+.+.+|+|||+.|+..+.+ ..|.+||..+++...+. ...+.+.+..|+|+|+.|+ +.+.++...+|.+.
T Consensus 194 ~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~---~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d 270 (427)
T PRK02889 194 SPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVA---NFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVN 270 (427)
T ss_pred CCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEee---cCCCCccceEECCCCCEEEEEEccCCCceEEEEE
Confidence 55678899999999999887753 35888888776543332 2334566889999998776 56778877777653
Q ss_pred CCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC
Q 018675 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 227 (352)
Q Consensus 149 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~ 227 (352)
.... ....+..+........|+|+++.++..+. ++...+|.+.... ... ..+.. .........|+|+|+
T Consensus 271 ~~~~--~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~-g~~---~~lt~----~g~~~~~~~~SpDG~ 340 (427)
T PRK02889 271 ADGS--GLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG-GAA---QRVTF----TGSYNTSPRISPDGK 340 (427)
T ss_pred CCCC--CcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC-Cce---EEEec----CCCCcCceEECCCCC
Confidence 2111 12233334444566789999998776554 4667777543211 111 11111 112233578999999
Q ss_pred EEEEEeCCC---cEEEEcCCc
Q 018675 228 KLVSCSDDL---TIKIWGADI 245 (352)
Q Consensus 228 ~l~s~~~dg---~i~iwd~~~ 245 (352)
+|+..+.++ .|.+||+..
T Consensus 341 ~Ia~~s~~~g~~~I~v~d~~~ 361 (427)
T PRK02889 341 LLAYISRVGGAFKLYVQDLAT 361 (427)
T ss_pred EEEEEEccCCcEEEEEEECCC
Confidence 998766554 588888753
No 229
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.32 E-value=7.7e-09 Score=85.25 Aligned_cols=179 Identities=16% Similarity=0.231 Sum_probs=117.5
Q ss_pred CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec--cccCCeeEEEE
Q 018675 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE--GHENEVKSVSW 126 (352)
Q Consensus 49 ~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~--~h~~~v~~v~~ 126 (352)
..|.|||-.....+ .+.....+|.++.+.++ .|++. ..+.|.+|...+. .+.+..+. ......++++-
T Consensus 75 NkviIWDD~k~~~i------~el~f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n-~k~l~~~et~~NPkGlC~~~~ 144 (346)
T KOG2111|consen 75 NKVIIWDDLKERCI------IELSFNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDN-PKLLHVIETRSNPKGLCSLCP 144 (346)
T ss_pred ceEEEEecccCcEE------EEEEeccceeeEEEcCC--eEEEE-ecCeEEEEEcCCC-hhheeeeecccCCCceEeecC
Confidence 57999984332221 11224578999999875 34433 4678999975432 22233222 22234444432
Q ss_pred CCCCcEEEE-eeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCc-EEEEecCCCCCCCceeEe
Q 018675 127 NASGTLLAT-CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT-IKVWWAEDTDSDNWHCVQ 204 (352)
Q Consensus 127 ~~~~~~l~s-~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~-i~iw~~~~~~~~~~~~~~ 204 (352)
..+..+||. |-.-|.|.+-|+...... .-..+.+|...|.|++...+|..+|++|..|+ |+|||..+. ..++
T Consensus 145 ~~~k~~LafPg~k~GqvQi~dL~~~~~~-~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g-----~~l~ 218 (346)
T KOG2111|consen 145 TSNKSLLAFPGFKTGQVQIVDLASTKPN-APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDG-----TLLQ 218 (346)
T ss_pred CCCceEEEcCCCccceEEEEEhhhcCcC-CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCC-----cEee
Confidence 223333332 345588999988543221 12456789999999999999999999999987 799976554 2344
Q ss_pred eeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 205 TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 205 ~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
++... .....|.+++|||+..+|+..++.|++.||.++.
T Consensus 219 E~RRG--~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 219 ELRRG--VDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred eeecC--CchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 44321 2346899999999999999999999999998764
No 230
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.31 E-value=4.1e-09 Score=96.59 Aligned_cols=171 Identities=12% Similarity=0.151 Sum_probs=107.1
Q ss_pred eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC---CCcEEEEEccCCceeeeEeeccccCCeeEEEE
Q 018675 50 TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF---DATTCIWEDVGGDYECVATLEGHENEVKSVSW 126 (352)
Q Consensus 50 ~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 126 (352)
.|.+||...... ... ..|...+.+.+|+|||+.|+..+. +..|.+|+..+++.. .+..+.+.+...+|
T Consensus 183 ~l~~~d~dg~~~----~~l--t~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~---~l~~~~g~~~~~~~ 253 (435)
T PRK05137 183 RLAIMDQDGANV----RYL--TDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE---LVGNFPGMTFAPRF 253 (435)
T ss_pred EEEEECCCCCCc----EEE--ecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE---EeecCCCcccCcEE
Confidence 566666644321 111 235678999999999999988764 357999998776543 23345567788999
Q ss_pred CCCCcEEE-EeeCCCc--EEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CC--cEEEEecCCCCCCCc
Q 018675 127 NASGTLLA-TCGRDKS--VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DN--TIKVWWAEDTDSDNW 200 (352)
Q Consensus 127 ~~~~~~l~-s~~~d~~--v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~--~i~iw~~~~~~~~~~ 200 (352)
+|+|+.|+ +.+.++. |.+||+..+. ...+..+........|+|+++.++..+. ++ .|.+++.....
T Consensus 254 SPDG~~la~~~~~~g~~~Iy~~d~~~~~----~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~---- 325 (435)
T PRK05137 254 SPDGRKVVMSLSQGGNTDIYTMDLRSGT----TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN---- 325 (435)
T ss_pred CCCCCEEEEEEecCCCceEEEEECCCCc----eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC----
Confidence 99998765 5566665 6666775443 2233444445667899999998876663 33 46666543321
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC-C--cEEEEcC
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD-L--TIKIWGA 243 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d-g--~i~iwd~ 243 (352)
.+.+.. +...+....|+|+|++|+....+ + .|.+|++
T Consensus 326 --~~~lt~----~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~ 365 (435)
T PRK05137 326 --PRRISF----GGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKP 365 (435)
T ss_pred --eEEeec----CCCcccCeEECCCCCEEEEEEcCCCceEEEEEEC
Confidence 122211 12335567899999998876543 2 3455543
No 231
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.31 E-value=1.8e-09 Score=98.89 Aligned_cols=190 Identities=12% Similarity=0.139 Sum_probs=119.8
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeC---CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE-
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSG---DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA- 90 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~---D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~- 90 (352)
..+..|...+.+..|+|+ ++.|+..+. +..|.+|++.++.. .. + ..+.+.+.+.+|+|||+.|+
T Consensus 195 ~~lt~~~~~v~~p~wSpD------G~~lay~s~~~g~~~i~~~dl~~g~~----~~-l-~~~~g~~~~~~~SPDG~~la~ 262 (435)
T PRK05137 195 RYLTDGSSLVLTPRFSPN------RQEITYMSYANGRPRVYLLDLETGQR----EL-V-GNFPGMTFAPRFSPDGRKVVM 262 (435)
T ss_pred EEEecCCCCeEeeEECCC------CCEEEEEEecCCCCEEEEEECCCCcE----EE-e-ecCCCcccCcEECCCCCEEEE
Confidence 345567889999999997 456666653 46899999876542 11 1 12345677889999998775
Q ss_pred EEeCCCc--EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CC--cEEEEecCCCCeeEEEEEeecCccC
Q 018675 91 TASFDAT--TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DK--SVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 91 s~~~d~~--i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
+.+.++. |.+|+..++.. ..+..+........|+|+|+.|+..+. ++ .|.++|+..+.. .. +..+...
T Consensus 263 ~~~~~g~~~Iy~~d~~~~~~---~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~---lt~~~~~ 335 (435)
T PRK05137 263 SLSQGGNTDIYTMDLRSGTT---TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RR---ISFGGGR 335 (435)
T ss_pred EEecCCCceEEEEECCCCce---EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EE---eecCCCc
Confidence 5555665 55556655543 334445556778999999998877663 33 577777654332 22 2222334
Q ss_pred eeEEEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC
Q 018675 166 VKMVQWHPTMDVLFSCSYDN---TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~ 234 (352)
+....|+|+++.++..+.++ .|.+|+..... ...+. ....+....|+|+|+.|+..+.
T Consensus 336 ~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~------~~~lt-----~~~~~~~p~~spDG~~i~~~~~ 396 (435)
T PRK05137 336 YSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG------ERILT-----SGFLVEGPTWAPNGRVIMFFRQ 396 (435)
T ss_pred ccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc------eEecc-----CCCCCCCCeECCCCCEEEEEEc
Confidence 56678999999887765432 46667653221 11121 1123556889999998876544
No 232
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.30 E-value=9e-12 Score=107.00 Aligned_cols=193 Identities=19% Similarity=0.265 Sum_probs=134.0
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEE
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 156 (352)
-+.+.++.+|++|+.|+.-|.+..+|..+....+ .+. -...|..+.|-.+.++|+.+.. +.+.|||- .+.. +
T Consensus 132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~--Ei~-v~Etv~Dv~~LHneq~~AVAQK-~y~yvYD~-~GtE---l 203 (545)
T KOG1272|consen 132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHF--EIN-VMETVRDVTFLHNEQFFAVAQK-KYVYVYDN-NGTE---L 203 (545)
T ss_pred CeeeeecCCccEEEecCCccceeeeecccceeee--eee-hhhhhhhhhhhcchHHHHhhhh-ceEEEecC-CCcE---E
Confidence 3667889999999999999999999998875433 332 2457889999777677776654 66889995 3444 3
Q ss_pred EEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
++++.|. .+..+.|-|-.-+|++++..|.++.-|+..... +..+ ..-...+..++-+|-+-.+-.|...|
T Consensus 204 HClk~~~-~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gkl-----Va~~----~t~~G~~~vm~qNP~NaVih~GhsnG 273 (545)
T KOG1272|consen 204 HCLKRHI-RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKL-----VASI----RTGAGRTDVMKQNPYNAVIHLGHSNG 273 (545)
T ss_pred eehhhcC-chhhhcccchhheeeecccCCceEEEeechhhh-----hHHH----HccCCccchhhcCCccceEEEcCCCc
Confidence 4444443 688999999888899999999998876643211 1111 11123444455555555555566666
Q ss_pred cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccc
Q 018675 237 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA 316 (352)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (352)
+|.+|.- +. .+.+.+...
T Consensus 274 tVSlWSP-----------------------------------------------------~s---------kePLvKiLc 291 (545)
T KOG1272|consen 274 TVSLWSP-----------------------------------------------------NS---------KEPLVKILC 291 (545)
T ss_pred eEEecCC-----------------------------------------------------CC---------cchHHHHHh
Confidence 6666632 21 122234457
Q ss_pred cCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 317 HDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 317 h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|.++|.++++.++|+ ++||+|.|..++|||+++
T Consensus 292 H~g~V~siAv~~~G~-YMaTtG~Dr~~kIWDlR~ 324 (545)
T KOG1272|consen 292 HRGPVSSIAVDRGGR-YMATTGLDRKVKIWDLRN 324 (545)
T ss_pred cCCCcceEEECCCCc-EEeecccccceeEeeecc
Confidence 999999999999986 688999999999999975
No 233
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.30 E-value=2e-12 Score=118.18 Aligned_cols=159 Identities=23% Similarity=0.396 Sum_probs=126.6
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
.|..+|+|+.|...|+++++|+.|..++||...+. .+...+.||.+.|+.++.+....+++++|.|.-|++|.++.+.
T Consensus 188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~--~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~ 265 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETA--RCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGA 265 (1113)
T ss_pred hhhhheeeeeeccccceEeecCccceeeeeeccch--hhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCc
Confidence 47788999999999999999999999999986655 5788899999999999999888899999999999999997664
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
++..+.+|+..|++++|+|- .+.+.||++++||.... ... ............-+.++.|...+.-++|
T Consensus 266 ---pvsvLrghtgavtaiafsP~----~sss~dgt~~~wd~r~~-~~~----y~prp~~~~~~~~~~s~~~~~~~~~f~T 333 (1113)
T KOG0644|consen 266 ---PVSVLRGHTGAVTAIAFSPR----ASSSDDGTCRIWDARLE-PRI----YVPRPLKFTEKDLVDSILFENNGDRFLT 333 (1113)
T ss_pred ---hHHHHhccccceeeeccCcc----ccCCCCCceEecccccc-ccc----cCCCCCCcccccceeeeecccccccccc
Confidence 46778999999999999995 37788999999976521 000 0000001112345667788888888999
Q ss_pred EeCCCcEEEEcCC
Q 018675 232 CSDDLTIKIWGAD 244 (352)
Q Consensus 232 ~~~dg~i~iwd~~ 244 (352)
++.|+.-..|.+.
T Consensus 334 gs~d~ea~n~e~~ 346 (1113)
T KOG0644|consen 334 GSRDGEARNHEFE 346 (1113)
T ss_pred ccCCcccccchhh
Confidence 9999988888543
No 234
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.29 E-value=2.1e-09 Score=98.41 Aligned_cols=173 Identities=18% Similarity=0.249 Sum_probs=107.6
Q ss_pred CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC---CcEEEEEccCCceeeeEeeccccCCeeEEE
Q 018675 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD---ATTCIWEDVGGDYECVATLEGHENEVKSVS 125 (352)
Q Consensus 49 ~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~ 125 (352)
.+|.+||...... ... ..+...+.+.+|+|||+.|+..+.+ ..+.+|+..+++...+. .+.+...+..
T Consensus 184 ~~l~i~D~~g~~~----~~l--t~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~---~~~g~~~~~~ 254 (433)
T PRK04922 184 YALQVADSDGYNP----QTI--LRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVA---SFRGINGAPS 254 (433)
T ss_pred EEEEEECCCCCCc----eEe--ecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEec---cCCCCccCce
Confidence 3578888754321 111 1245678899999999999987754 35888888766543332 3344456789
Q ss_pred ECCCCcEEE-EeeCCC--cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CCcEEEE--ecCCCCCCC
Q 018675 126 WNASGTLLA-TCGRDK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DNTIKVW--WAEDTDSDN 199 (352)
Q Consensus 126 ~~~~~~~l~-s~~~d~--~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~i~iw--~~~~~~~~~ 199 (352)
|+|+|+.++ +.+.++ .|.+||+..+.. ..+..+.......+|+|+++.++..+. ++...+| ++... .
T Consensus 255 ~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~----~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g---~ 327 (433)
T PRK04922 255 FSPDGRRLALTLSRDGNPEIYVMDLGSRQL----TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGG---S 327 (433)
T ss_pred ECCCCCEEEEEEeCCCCceEEEEECCCCCe----EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC---C
Confidence 999998764 555555 588888865432 223344444467899999998876664 4554444 43221 1
Q ss_pred ceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC---cEEEEcCC
Q 018675 200 WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL---TIKIWGAD 244 (352)
Q Consensus 200 ~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg---~i~iwd~~ 244 (352)
. ..+.. +.......+|+|+|++++..+.++ .|.+||+.
T Consensus 328 ~---~~lt~----~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~ 368 (433)
T PRK04922 328 A---ERLTF----QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS 368 (433)
T ss_pred e---EEeec----CCCCccCEEECCCCCEEEEEECCCCceeEEEEECC
Confidence 1 11211 112234679999999988665433 58888864
No 235
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.27 E-value=8.7e-08 Score=85.18 Aligned_cols=294 Identities=14% Similarity=0.151 Sum_probs=150.9
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
.+.++......-..+.++|+ +.+++.++.|+.|.++|+.+.+...+. + -......+++|+||++++++
T Consensus 28 ~~~~i~~~~~~h~~~~~s~D------gr~~yv~~rdg~vsviD~~~~~~v~~i----~--~G~~~~~i~~s~DG~~~~v~ 95 (369)
T PF02239_consen 28 VVARIPTGGAPHAGLKFSPD------GRYLYVANRDGTVSVIDLATGKVVATI----K--VGGNPRGIAVSPDGKYVYVA 95 (369)
T ss_dssp EEEEEE-STTEEEEEE-TT-------SSEEEEEETTSEEEEEETTSSSEEEEE----E---SSEEEEEEE--TTTEEEEE
T ss_pred EEEEEcCCCCceeEEEecCC------CCEEEEEcCCCeEEEEECCcccEEEEE----e--cCCCcceEEEcCCCCEEEEE
Confidence 34455433333234677886 468888899999999999887643222 1 12345789999999998876
Q ss_pred e-CCCcEEEEEccCCceeeeEeecc-------ccCCeeEEEECCCCcEEEEeeCC-CcEEEEecCCCCeeEEEEEeecCc
Q 018675 93 S-FDATTCIWEDVGGDYECVATLEG-------HENEVKSVSWNASGTLLATCGRD-KSVWIWEVMPGNEFECVSVLQGHA 163 (352)
Q Consensus 93 ~-~d~~i~i~~~~~~~~~~~~~~~~-------h~~~v~~v~~~~~~~~l~s~~~d-~~v~vwd~~~~~~~~~~~~~~~h~ 163 (352)
. ..+.+.++|..+. +++..+.. ....+.++..+|....++..-.| +.|.+-|........ ...+. -.
T Consensus 96 n~~~~~v~v~D~~tl--e~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~-~~~i~-~g 171 (369)
T PF02239_consen 96 NYEPGTVSVIDAETL--EPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLK-VTTIK-VG 171 (369)
T ss_dssp EEETTEEEEEETTT----EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEE-EEEEE---
T ss_pred ecCCCceeEeccccc--cceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccc-eeeec-cc
Confidence 5 5789999987654 33444322 23467778778877766555554 777777765443322 12222 22
Q ss_pred cCeeEEEEcCCCCEEEEE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC-CEEEEEe--------
Q 018675 164 QDVKMVQWHPTMDVLFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DKLVSCS-------- 233 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~-~~l~s~~-------- 233 (352)
.......|.|++++++.+ ..++.|.++|.... .....+......|..++..+ .+|.. ....+.+
T Consensus 172 ~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~-----k~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~~~~~~~~~~ 245 (369)
T PF02239_consen 172 RFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTG-----KLVALIDTGKKPHPGPGANF-PHPGFGPVWATSGLGYFAIPL 245 (369)
T ss_dssp TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTT-----EEEEEEE-SSSBEETTEEEE-EETTTEEEEEEEBSSSSEEEE
T ss_pred ccccccccCcccceeeecccccceeEEEeeccc-----eEEEEeeccccccccccccc-cCCCcceEEeeccccceeccc
Confidence 345577899999987664 45678888875432 22222222223344444332 23322 2222222
Q ss_pred -CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEec----CCCCeEEEEEccCCccccCccc
Q 018675 234 -DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASG----AADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 234 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~----~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
..+.+.+||. ..|+....+.. .... .-+..+|++ ++... ...+.+.+++...-
T Consensus 246 ig~~~v~v~d~-----------~~wkvv~~I~~-~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl-------- 304 (369)
T PF02239_consen 246 IGTDPVSVHDD-----------YAWKVVKTIPT-QGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTL-------- 304 (369)
T ss_dssp EE--TTT-STT-----------TBTSEEEEEE--SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGT--------
T ss_pred ccCCccccchh-----------hcCeEEEEEEC-CCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCc--------
Confidence 1223333432 23554444443 2222 333445554 33332 34467777754321
Q ss_pred ceeeecc-cccCcceeEEEecCCCcceEEEecCCC-eEEEEeecc
Q 018675 308 KMLLKKE-KAHDMDVNSVQWSPGERRLLASASDDG-MIKIWELAN 350 (352)
Q Consensus 308 ~~~~~~~-~~h~~~i~~~~~sp~~~~~l~s~~~Dg-~i~iw~~~~ 350 (352)
+...+. .+-...+..+.|+++|+.+.+|.-.++ .|.|||..+
T Consensus 305 -~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~T 348 (369)
T PF02239_consen 305 -KVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKT 348 (369)
T ss_dssp -EEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTT
T ss_pred -ceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCC
Confidence 111111 111234899999999998888887777 899999754
No 236
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.27 E-value=6e-10 Score=92.62 Aligned_cols=271 Identities=16% Similarity=0.246 Sum_probs=162.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccC---CceeeeEeecccc------------CCeeEEEECCCCc--EEEEee
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVG---GDYECVATLEGHE------------NEVKSVSWNASGT--LLATCG 137 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~---~~~~~~~~~~~h~------------~~v~~v~~~~~~~--~l~s~~ 137 (352)
.-|.++.|...|.+|++|..+|.+.++.... ++.......+.|. ..|..+.|.++++ .++...
T Consensus 26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlst 105 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLST 105 (433)
T ss_pred cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEec
Confidence 5678899999999999999999999986432 2222333444442 4588999988655 577888
Q ss_pred CCCcEEEEecCCCCeeE--------------------------------EEEE-eecCccCeeEEEEcCCCCEEEEEeCC
Q 018675 138 RDKSVWIWEVMPGNEFE--------------------------------CVSV-LQGHAQDVKMVQWHPTMDVLFSCSYD 184 (352)
Q Consensus 138 ~d~~v~vwd~~~~~~~~--------------------------------~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d 184 (352)
.|.+|++|.+....... +.+. -.+|+.-|+++.+..|...++++ .|
T Consensus 106 NdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-Dd 184 (433)
T KOG1354|consen 106 NDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-DD 184 (433)
T ss_pred CCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-cc
Confidence 99999999874221100 1111 23677888999999998887776 46
Q ss_pred CcEEEEecCCCCCCCceeEeeee-ccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCcccccc-----CCCCccc
Q 018675 185 NTIKVWWAEDTDSDNWHCVQTIS-ESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADITRMQS-----GDGYASW 257 (352)
Q Consensus 185 ~~i~iw~~~~~~~~~~~~~~~~~-~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~ 257 (352)
=.|.+|+++-.+. ++..+ .+. ......+.-|++-.|+|. ...++-.+..|+|++.|++...+-. .+.....
T Consensus 185 LRINLWnlei~d~-sFnIV-DIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 185 LRINLWNLEIIDQ-SFNIV-DIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred eeeeeccccccCC-ceeEE-EccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 6799997765432 11111 111 011112456888899996 5667778889999999987321100 0000110
Q ss_pred eeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccc--cCcccceeeecc--cccCc---ceeEEEecCCC
Q 018675 258 RHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLI--DGPSYKMLLKKE--KAHDM---DVNSVQWSPGE 330 (352)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~--~~~~~~~~~~~~--~~h~~---~i~~~~~sp~~ 330 (352)
... .+...-..+|..+.|+.+|.++..=.--++++|+....... ..+....+..++ ..-+. .-..++|+-++
T Consensus 263 ~~r-sffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~ 341 (433)
T KOG1354|consen 263 SSR-SFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGND 341 (433)
T ss_pred cch-hhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCc
Confidence 000 11111123456678888876655545578999977432210 000000000000 00111 23457898877
Q ss_pred cceEEEecCCCeEEEEeecc
Q 018675 331 RRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 331 ~~~l~s~~~Dg~i~iw~~~~ 350 (352)
. .++|||.....++++.++
T Consensus 342 ~-~v~TGsy~n~frvf~~~~ 360 (433)
T KOG1354|consen 342 S-YVMTGSYNNVFRVFNLAR 360 (433)
T ss_pred c-eEecccccceEEEecCCC
Confidence 6 577999999999999654
No 237
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.26 E-value=1.2e-09 Score=99.68 Aligned_cols=191 Identities=17% Similarity=0.180 Sum_probs=118.9
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCC---CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE-EE
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGD---KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA-TA 92 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D---~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~ 92 (352)
+..+.+.+.+.+|+|+ ++.++..+.+ ..|.+|++.++... ... .....+.+.+|+|||+.|+ +.
T Consensus 191 l~~~~~~v~~p~wSPD------G~~la~~s~~~~~~~I~~~dl~~g~~~----~l~--~~~g~~~~~~~SPDG~~la~~~ 258 (427)
T PRK02889 191 ALSSPEPIISPAWSPD------GTKLAYVSFESKKPVVYVHDLATGRRR----VVA--NFKGSNSAPAWSPDGRTLAVAL 258 (427)
T ss_pred eccCCCCcccceEcCC------CCEEEEEEccCCCcEEEEEECCCCCEE----Eee--cCCCCccceEECCCCCEEEEEE
Confidence 3457778899999997 4567666543 45888998766421 111 1224556789999998876 56
Q ss_pred eCCCcEEEEEcc--CCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CCcEEEEecCCC-CeeEEEEEeecCccCeeE
Q 018675 93 SFDATTCIWEDV--GGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DKSVWIWEVMPG-NEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 93 ~~d~~i~i~~~~--~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~v~vwd~~~~-~~~~~~~~~~~h~~~v~~ 168 (352)
+.++...||... ++. ...+..+.+......|+|+|+.|+..+. ++...+|.+... .....+ .+.+ .....
T Consensus 259 ~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~~g--~~~~~ 332 (427)
T PRK02889 259 SRDGNSQIYTVNADGSG---LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TFTG--SYNTS 332 (427)
T ss_pred ccCCCceEEEEECCCCC---cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ecCC--CCcCc
Confidence 678877777643 332 2334445555677899999998776554 466777765322 221211 1222 22345
Q ss_pred EEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 169 VQWHPTMDVLFSCSYDN---TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
..|+|+++.++..+.++ .|.+|++..... ..+.. + .......|+|+|++|+..+.++
T Consensus 333 ~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~------~~lt~---~--~~~~~p~~spdg~~l~~~~~~~ 392 (427)
T PRK02889 333 PRISPDGKLLAYISRVGGAFKLYVQDLATGQV------TALTD---T--TRDESPSFAPNGRYILYATQQG 392 (427)
T ss_pred eEECCCCCEEEEEEccCCcEEEEEEECCCCCe------EEccC---C--CCccCceECCCCCEEEEEEecC
Confidence 78999999988766554 588887654321 11211 1 1234678999999988776543
No 238
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.26 E-value=3.8e-10 Score=95.19 Aligned_cols=153 Identities=18% Similarity=0.295 Sum_probs=123.1
Q ss_pred ccEEEEeeCC--CeEEEEecCCCceeeeeeeeeec----ceecceEEEEECCC--CCEEEEEeCCCcEEEEEccCCceee
Q 018675 39 APVFASCSGD--KTVRIWEQSASSRFWNCKAVLEE----MHTRTVRSCAWSPS--GKLLATASFDATTCIWEDVGGDYEC 110 (352)
Q Consensus 39 ~~~l~s~s~D--~~v~~w~~~~~~~~~~~~~~~~~----~h~~~v~~~~~s~~--~~~l~s~~~d~~i~i~~~~~~~~~~ 110 (352)
..++|+||.. ..+++|+++..+++|..+..-.. .-.--++++.|-+. ...+|++..-+.+++||...+. .+
T Consensus 161 p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR-RP 239 (412)
T KOG3881|consen 161 PYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR-RP 239 (412)
T ss_pred CceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccC-cc
Confidence 4678889988 89999999988888776543211 12234578889887 7889999999999999987554 45
Q ss_pred eEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 111 VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190 (352)
Q Consensus 111 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw 190 (352)
+..+.--..+++++...|+++++++|..-+.+..+|++.+... ...+.+-...++++..+|+.+++++++-|+.++|+
T Consensus 240 V~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~--g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIh 317 (412)
T KOG3881|consen 240 VAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLL--GCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIH 317 (412)
T ss_pred eeEeccccCcceeeeecCCCcEEEEecccchhheecccCceee--ccccCCccCCcceEEEcCCCceEEeeccceeEEEe
Confidence 6666656778999999999999999999999999999765422 23366777889999999999999999999999999
Q ss_pred ecCC
Q 018675 191 WAED 194 (352)
Q Consensus 191 ~~~~ 194 (352)
|+..
T Consensus 318 D~kt 321 (412)
T KOG3881|consen 318 DIKT 321 (412)
T ss_pred eccc
Confidence 8754
No 239
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.26 E-value=1.5e-10 Score=114.01 Aligned_cols=193 Identities=16% Similarity=0.249 Sum_probs=142.5
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCee
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 153 (352)
-..|.++.=+|...+.+||+.||.+++|....+.........+ +..|+.+.|+..|+.+..+..||.+-+|.+.+
T Consensus 2208 v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g-~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p---- 2282 (2439)
T KOG1064|consen 2208 VENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAG-NSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP---- 2282 (2439)
T ss_pred cCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccC-cchhhhhhhcccCCceeeeccCCceeecccCC----
Confidence 3567777778888999999999999999876554322222233 48899999999999999999999999999853
Q ss_pred EEEEEeecCccCeeEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCS---YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
++....+.|........|-. ..+++++ .++.+.+||..-...... +. ..|...++++++-|....|+
T Consensus 2283 k~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~--v~------~~H~~gaT~l~~~P~~qlli 2352 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSL--VH------TCHDGGATVLAYAPKHQLLI 2352 (2439)
T ss_pred cceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccce--ee------eecCCCceEEEEcCcceEEE
Confidence 34566778887777777754 4555553 467899998654433221 21 36889999999999999999
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccc
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLI 302 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~ 302 (352)
+||.+|.|++||++..++. +.+.. +....+++.|+..|.+++|..+.-.+.
T Consensus 2353 sggr~G~v~l~D~rqrql~-----------h~~~~----------~~~~~~f~~~ss~g~ikIw~~s~~~ll 2403 (2439)
T KOG1064|consen 2353 SGGRKGEVCLFDIRQRQLR-----------HTFQA----------LDTREYFVTGSSEGNIKIWRLSEFGLL 2403 (2439)
T ss_pred ecCCcCcEEEeehHHHHHH-----------HHhhh----------hhhhheeeccCcccceEEEEccccchh
Confidence 9999999999998643221 11111 234568999999999999988765443
No 240
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.26 E-value=2.6e-09 Score=97.75 Aligned_cols=198 Identities=15% Similarity=0.161 Sum_probs=120.1
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCC---CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE-E
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGD---KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA-T 91 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D---~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s 91 (352)
.+..|...+.+..|+|+ ++.++..+.+ ..|.+|++.++... . + ........+.+|+|||+.|+ +
T Consensus 198 ~lt~~~~~v~~p~wSpD------g~~la~~s~~~~~~~l~~~dl~~g~~~----~-l-~~~~g~~~~~~~SpDG~~l~~~ 265 (433)
T PRK04922 198 TILRSAEPILSPAWSPD------GKKLAYVSFERGRSAIYVQDLATGQRE----L-V-ASFRGINGAPSFSPDGRRLALT 265 (433)
T ss_pred EeecCCCccccccCCCC------CCEEEEEecCCCCcEEEEEECCCCCEE----E-e-ccCCCCccCceECCCCCEEEEE
Confidence 34456677888999997 4677777643 46899998765421 1 1 11233445789999998775 4
Q ss_pred EeCCC--cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CCc--EEEEecCCCCeeEEEEEeecCccCe
Q 018675 92 ASFDA--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DKS--VWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 92 ~~~d~--~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~--v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
.+.++ .|.+|+..++... .+..+.......+|+|+|+.|+.++. ++. |.++++..+. ...+. . +....
T Consensus 266 ~s~~g~~~Iy~~d~~~g~~~---~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~-~~~lt-~--~g~~~ 338 (433)
T PRK04922 266 LSRDGNPEIYVMDLGSRQLT---RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS-AERLT-F--QGNYN 338 (433)
T ss_pred EeCCCCceEEEEECCCCCeE---ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-eEEee-c--CCCCc
Confidence 45555 4778887666432 33445455567899999998877663 444 5555554332 22221 2 22234
Q ss_pred eEEEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC-C--cEEE
Q 018675 167 KMVQWHPTMDVLFSCSYDN---TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD-L--TIKI 240 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d-g--~i~i 240 (352)
...+|+|+++.++..+.++ .|.+|+...... ..+. +........|+|+|++++..+.+ + .|.+
T Consensus 339 ~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~------~~Lt-----~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~ 407 (433)
T PRK04922 339 ARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV------RTLT-----PGSLDESPSFAPNGSMVLYATREGGRGVLAA 407 (433)
T ss_pred cCEEECCCCCEEEEEECCCCceeEEEEECCCCCe------EECC-----CCCCCCCceECCCCCEEEEEEecCCceEEEE
Confidence 4689999999887665433 588887644321 1121 11123456899999987766543 3 3444
Q ss_pred EcC
Q 018675 241 WGA 243 (352)
Q Consensus 241 wd~ 243 (352)
+++
T Consensus 408 ~~~ 410 (433)
T PRK04922 408 VST 410 (433)
T ss_pred EEC
Confidence 443
No 241
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.25 E-value=7e-08 Score=81.30 Aligned_cols=284 Identities=12% Similarity=0.119 Sum_probs=168.4
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC---CcEEEEEccC--CceeeeEeeccccCCee
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD---ATTCIWEDVG--GDYECVATLEGHENEVK 122 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~i~i~~~~~--~~~~~~~~~~~h~~~v~ 122 (352)
++-|.+|++.+.....+....+ .+....+-++|+|+++.|-++..+ +.+..|.... +....+.....-..+.+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v--~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~ 92 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLV--AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPC 92 (346)
T ss_pred CCceEEEEEeCcccccchhhhc--cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCe
Confidence 5779999987543322222222 245677889999999988877654 6777776543 55444433222223447
Q ss_pred EEEECCCCcEEEEeeC-CCcEEEEecCCCCeeEEEEEeecCccC----------eeEEEEcCCCCEEEEEeC-CCcEEEE
Q 018675 123 SVSWNASGTLLATCGR-DKSVWIWEVMPGNEFECVSVLQGHAQD----------VKMVQWHPTMDVLFSCSY-DNTIKVW 190 (352)
Q Consensus 123 ~v~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s~~~-d~~i~iw 190 (352)
-+++++++++++++.. -+.|.++-++.............|... +-...+.|++++|++..- .-.|.+|
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y 172 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLY 172 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEE
Confidence 8999999999888864 478999988654333222222234333 667889999998887653 3358888
Q ss_pred ecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCcEEEEcCCcc--ccccCCCCccceeeEEeec-c
Q 018675 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGADIT--RMQSGDGYASWRHLCTISG-Y 266 (352)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~-~ 266 (352)
++.+...... ..... .-+..-..|.|+|++++.-..+ -+++|.+|..+.. ++. ....+.++.. +
T Consensus 173 ~~~dg~L~~~----~~~~v--~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~------~lQ~i~tlP~dF 240 (346)
T COG2706 173 DLDDGKLTPA----DPAEV--KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFE------ELQTIDTLPEDF 240 (346)
T ss_pred EcccCccccc----ccccc--CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEE------EeeeeccCcccc
Confidence 8775422111 11111 1234566799999999866554 5899999976532 111 0011111111 1
Q ss_pred -cCcceEEEEecCCceEEecCCCC--eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeE
Q 018675 267 -HDRTIFSVHWSREGIIASGAADD--SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMI 343 (352)
Q Consensus 267 -~~~~i~~~~~~~~~~~~s~~~d~--~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i 343 (352)
-....-.+..+++|.++-++..+ .|.++......- . -.+......+...-.++.|+|+++.++|+.-++..|
T Consensus 241 ~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g---~--L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i 315 (346)
T COG2706 241 TGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGG---K--LELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNI 315 (346)
T ss_pred CCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCC---E--EEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcE
Confidence 12344567788888655555443 566664433210 0 111222233444467888999998777766666779
Q ss_pred EEEeecc
Q 018675 344 KIWELAN 350 (352)
Q Consensus 344 ~iw~~~~ 350 (352)
.+|.+..
T Consensus 316 ~vf~~d~ 322 (346)
T COG2706 316 TVFERDK 322 (346)
T ss_pred EEEEEcC
Confidence 9998754
No 242
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.22 E-value=2.3e-07 Score=82.53 Aligned_cols=284 Identities=13% Similarity=0.114 Sum_probs=142.8
Q ss_pred cEE-EEeeCCCeEEEEecCCCceeeeeeeeeecceecce-EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccc
Q 018675 40 PVF-ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV-RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGH 117 (352)
Q Consensus 40 ~~l-~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v-~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h 117 (352)
.++ ++-..+++|.+.|..+.+...... . ...+ ..+.|+|||+++.+++.|+.+.++|..+.+ .+..++.
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~----~--~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~--~v~~i~~- 76 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIP----T--GGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGK--VVATIKV- 76 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-------STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSS--EEEEEE--
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEc----C--CCCceeEEEecCCCCEEEEEcCCCeEEEEECCccc--EEEEEec-
Confidence 344 455678999999988765332221 1 1122 346799999999999999999999987764 3445543
Q ss_pred cCCeeEEEECCCCcEEEEee-CCCcEEEEecCCCCeeEEEEEeec----CccCeeEEEEcCCCCEEEEEeC-CCcEEEEe
Q 018675 118 ENEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECVSVLQG----HAQDVKMVQWHPTMDVLFSCSY-DNTIKVWW 191 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~ 191 (352)
......++++++|++++++. .++.+.++|....+..+.+..... ....+..+-.+|....++..-. .+.|-+-|
T Consensus 77 G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVd 156 (369)
T PF02239_consen 77 GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVD 156 (369)
T ss_dssp SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEE
Confidence 34567899999999877665 689999999865544333322110 1234556666777775555544 46666666
Q ss_pred cCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCCccccccCCCCccceeeEEeecccCcc
Q 018675 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRT 270 (352)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (352)
..+.. .. ....+. -........|+|+++|++.+ -.++.|-++|.+..++....... ...|...
T Consensus 157 y~d~~--~~-~~~~i~-----~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g--------~~p~~~~ 220 (369)
T PF02239_consen 157 YSDPK--NL-KVTTIK-----VGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTG--------KKPHPGP 220 (369)
T ss_dssp TTTSS--CE-EEEEEE-------TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-S--------SSBEETT
T ss_pred ecccc--cc-ceeeec-----ccccccccccCcccceeeecccccceeEEEeeccceEEEEeecc--------ccccccc
Confidence 54431 11 122222 12345678899999987664 45678999987643321100000 0001111
Q ss_pred eEEEEecCCc-eEEec-CCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEE---ecCCCeEEE
Q 018675 271 IFSVHWSREG-IIASG-AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS---ASDDGMIKI 345 (352)
Q Consensus 271 i~~~~~~~~~-~~~s~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s---~~~Dg~i~i 345 (352)
...+.-...+ ..+.. .....+-..-.......+...++. +++....... .-+.-||+++++.+. +...++|.|
T Consensus 221 ~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkv-v~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~v 298 (369)
T PF02239_consen 221 GANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKV-VKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQV 298 (369)
T ss_dssp EEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSE-EEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEE
T ss_pred cccccCCCcceEEeeccccceecccccCCccccchhhcCeE-EEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEE
Confidence 1111111111 11111 111222222111111122222332 2333333444 667779999887766 566789999
Q ss_pred Eeecc
Q 018675 346 WELAN 350 (352)
Q Consensus 346 w~~~~ 350 (352)
+|..+
T Consensus 299 iD~~t 303 (369)
T PF02239_consen 299 IDKKT 303 (369)
T ss_dssp EECCG
T ss_pred EECcC
Confidence 99865
No 243
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.20 E-value=1.3e-09 Score=88.88 Aligned_cols=208 Identities=15% Similarity=0.207 Sum_probs=135.7
Q ss_pred cceEEEEEccCCCCCCCcc-EEEEeeCCCeEEEEecCCCceeeeeeeee-ecceecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 22 DRVWSLAWKPTAGVDGVAP-VFASCSGDKTVRIWEQSASSRFWNCKAVL-EEMHTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~-~l~s~s~D~~v~~w~~~~~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
..++.|-|+-... + +. .++-+-.+|.|.++............... .+.-.....++.|++.+..++++..+|.+.
T Consensus 70 s~~~dm~w~~~~~-~--g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~ 146 (339)
T KOG0280|consen 70 STEFDMLWRIRET-D--GDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSIS 146 (339)
T ss_pred cccceeeeeeccC-C--ccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEE
Confidence 3456666654221 1 22 45666778999999765432211111110 000111245788999999999999999988
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC-CCCE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDV 177 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~ 177 (352)
+-+......+..+.++.|+-+.+...|+. +.+++++||+|+.+..||++..+. ......+-|...|.++.-+| ...+
T Consensus 147 ~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~-~i~~n~kvH~~GV~SI~ss~~~~~~ 225 (339)
T KOG0280|consen 147 GVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT-FIWHNSKVHTSGVVSIYSSPPKPTY 225 (339)
T ss_pred EEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc-eeeecceeeecceEEEecCCCCCce
Confidence 54444444455567889999999999975 557899999999999999984332 22233456888899988776 4678
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC--CCEEEEEeCCCcEEEEcC
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--GDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~--~~~l~s~~~dg~i~iwd~ 243 (352)
+++|+.|..|++||.+.-. +.+.... -++.||.+..+|. +..|++|..+| .+|-+.
T Consensus 226 I~TGsYDe~i~~~DtRnm~-------kPl~~~~--v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~ 283 (339)
T KOG0280|consen 226 IATGSYDECIRVLDTRNMG-------KPLFKAK--VGGGVWRIKHHPEIFHRLLAACMHNG-AKILDS 283 (339)
T ss_pred EEEeccccceeeeehhccc-------CccccCc--cccceEEEEecchhhhHHHHHHHhcC-ceEEEe
Confidence 9999999999999865421 1222222 2378999999995 34566666655 455543
No 244
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.20 E-value=7.2e-07 Score=75.29 Aligned_cols=260 Identities=13% Similarity=0.176 Sum_probs=157.0
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeC---CCeEEEEecCCC-ceeeeeeeeeecceecceEEEEECCCCCEEEEEeC
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSG---DKTVRIWEQSAS-SRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~---D~~v~~w~~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 94 (352)
.+.+..+-++|+|+. +.|.++-. +|.+.-|.++.. ..+........ ...+-..++++++|++++++..
T Consensus 37 ~~~~nptyl~~~~~~------~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~--~g~~p~yvsvd~~g~~vf~AnY 108 (346)
T COG2706 37 AELGNPTYLAVNPDQ------RHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTL--PGSPPCYVSVDEDGRFVFVANY 108 (346)
T ss_pred cccCCCceEEECCCC------CEEEEEEecCCcCcEEEEEEcCCCCeEEEeecccc--CCCCCeEEEECCCCCEEEEEEc
Confidence 466777788888873 56777743 577888877653 22211111111 1123378899999999999886
Q ss_pred C-CcEEEEEccC-CceeeeEeeccccCC----------eeEEEECCCCcEEEEee--CCCcEEEEecCCCCeeEEEEE-e
Q 018675 95 D-ATTCIWEDVG-GDYECVATLEGHENE----------VKSVSWNASGTLLATCG--RDKSVWIWEVMPGNEFECVSV-L 159 (352)
Q Consensus 95 d-~~i~i~~~~~-~~~~~~~~~~~h~~~----------v~~v~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~-~ 159 (352)
. +.|.++-... +..........|.+. +....+.|++++|++.. .|+ |.+|++..+.. ..... .
T Consensus 109 ~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dr-i~~y~~~dg~L-~~~~~~~ 186 (346)
T COG2706 109 HSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDR-IFLYDLDDGKL-TPADPAE 186 (346)
T ss_pred cCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCce-EEEEEcccCcc-ccccccc
Confidence 4 6777876533 332222222335544 88899999999888774 554 88999875432 11111 1
Q ss_pred ecCccCeeEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeeeccCCC--CcccEEEEEEcCCCCEEEEEeC-C
Q 018675 160 QGHAQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNNG--HSSTIWALSFNAKGDKLVSCSD-D 235 (352)
Q Consensus 160 ~~h~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~--h~~~i~~l~~~~~~~~l~s~~~-d 235 (352)
..-...-+.+.|||++++.....+ +++|.+|..... ...+..++.+...... -.....+|..+|+|++|.++.. .
T Consensus 187 v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~-~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~ 265 (346)
T COG2706 187 VKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPA-VGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGH 265 (346)
T ss_pred cCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCC-CceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCC
Confidence 122345678999999998877766 788999976543 2344445544322222 2356778899999999988754 3
Q ss_pred CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCC-CeEEEEEcc
Q 018675 236 LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAAD-DSVQFFVES 297 (352)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d-~~v~~~~~~ 297 (352)
..|.+|.++-. ...-........+......+.+++++ +|+++..+ ..+.+|...
T Consensus 266 dsI~~f~V~~~--------~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d 321 (346)
T COG2706 266 DSIAVFSVDPD--------GGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERD 321 (346)
T ss_pred CeEEEEEEcCC--------CCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEc
Confidence 36777755311 00011112223345556777777765 55555554 467777543
No 245
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.19 E-value=9.3e-10 Score=103.45 Aligned_cols=190 Identities=17% Similarity=0.264 Sum_probs=134.4
Q ss_pred EEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC-----eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q 018675 124 VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD-----VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 124 v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 198 (352)
..+.-....++.+..++.+.+||...+... .... +... ..-+.++++.-++++|+.-+.|.+|+.... ..
T Consensus 93 ~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~---~~i~-~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~d-n~ 167 (967)
T KOG0974|consen 93 AKLFEENKKIALVTSRNSLLIRDSKNSSVL---SKIQ-SDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHED-NK 167 (967)
T ss_pred cchhhhcceEEEEEcCceEEEEecccCcee---hhcC-CCceEEEEeEEEEeccCcEEEEEeccccccEEEEecccc-CC
Confidence 333445567888888899999997644311 1111 1111 122345666678899999999999976532 11
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR 278 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 278 (352)
. . ...||++.|.++.++-+|.++++.++|..+|+|+++..+... +.. -.|...++.+.+.+
T Consensus 168 p---~-----~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~----------~~~-fgHsaRvw~~~~~~ 228 (967)
T KOG0974|consen 168 P---I-----RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG----------CTG-FGHSARVWACCFLP 228 (967)
T ss_pred c---c-----eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC----------ccc-ccccceeEEEEecc
Confidence 1 1 235899999999999999999999999999999987543322 011 12667788888888
Q ss_pred CceEEecCCCCeEEEEEccCCccccCcccceeeeccccc-CcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 279 EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 279 ~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
. .+++++.|.+.++|...... +....+| ...|..++..++.. +++|++.|+.+++|+.-
T Consensus 229 n-~i~t~gedctcrvW~~~~~~----------l~~y~~h~g~~iw~~~~~~~~~-~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 229 N-RIITVGEDCTCRVWGVNGTQ----------LEVYDEHSGKGIWKIAVPIGVI-IKVTGGNDSTLKLWDLN 288 (967)
T ss_pred c-eeEEeccceEEEEEecccce----------ehhhhhhhhcceeEEEEcCCce-EEEeeccCcchhhhhhh
Confidence 8 99999999999999443321 2244556 35699999988764 68899999999999874
No 246
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.14 E-value=1e-09 Score=96.79 Aligned_cols=300 Identities=15% Similarity=0.254 Sum_probs=172.5
Q ss_pred ccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceee---eeeeeeecceecceEEEEECC
Q 018675 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW---NCKAVLEEMHTRTVRSCAWSP 84 (352)
Q Consensus 8 ~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~---~~~~~~~~~h~~~v~~~~~s~ 84 (352)
+|+-..+..+.||.+.|..+.--.+. .-|+++|.|++|++|.+....... .|. .....|+++|.++.|-.
T Consensus 722 n~~~irL~nf~GH~~~iRai~AidNE------NSFiSASkDKTVKLWSik~EgD~~~tsaCQ-fTY~aHkk~i~~igfL~ 794 (1034)
T KOG4190|consen 722 NFDHIRLCNFTGHQEKIRAIAAIDNE------NSFISASKDKTVKLWSIKPEGDEIGTSACQ-FTYQAHKKPIHDIGFLA 794 (1034)
T ss_pred ccceeeeecccCcHHHhHHHHhcccc------cceeeccCCceEEEEEeccccCccccceee-eEhhhccCcccceeeee
Confidence 34445567889999999887654443 469999999999999876432111 122 23357999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceeeeEe---eccccCCeeEEEECCCCcE-EEEeeCCCcEEEEecCCCCeeEEEEEee
Q 018675 85 SGKLLATASFDATTCIWEDVGGDYECVAT---LEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPGNEFECVSVLQ 160 (352)
Q Consensus 85 ~~~~l~s~~~d~~i~i~~~~~~~~~~~~~---~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 160 (352)
+-+.+++ .|+.|.+||..-+..-.... ..+..+.|.|+. +-+... ++-|+...+|+++|.+...-...+....
T Consensus 795 ~lr~i~S--cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcn 871 (1034)
T KOG4190|consen 795 DLRSIAS--CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCN 871 (1034)
T ss_pred ccceeee--ccCcceeecccccchhHhhhcCcccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEecc
Confidence 9988875 57999999976543211011 112223455542 112333 4445788999999988765444444432
Q ss_pred --cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCC-CCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCc
Q 018675 161 --GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD-SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237 (352)
Q Consensus 161 --~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~ 237 (352)
+...-+++++..|.|+.++++-..|.|.+.|.+... .++|+... -....++ -|..+.|+....|..
T Consensus 872 a~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpme----------cdllqla-apsdq~L~~saldHs 940 (1034)
T KOG4190|consen 872 APGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPME----------CDLLQLA-APSDQALAQSALDHS 940 (1034)
T ss_pred CCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCccc----------chhhhhc-CchhHHHHhhcccce
Confidence 233457788999999999999999999999876653 22232211 1111121 255566777777888
Q ss_pred EEE-EcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccc
Q 018675 238 IKI-WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA 316 (352)
Q Consensus 238 i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (352)
+.+ |-.-...+.-... ....+.+- +.+ -+.-++.+-..+.+.+|.......... .-.++ ....
T Consensus 941 laVnWhaldgimh~q~k-pppepahf--------lqs----vgpSLV~a~~Gn~lgVYad~a~~ha~s-titKi--R~d~ 1004 (1034)
T KOG4190|consen 941 LAVNWHALDGIMHLQDK-PPPEPAHF--------LQS----VGPSLVTAQNGNILGVYADSAELHAES-TITKI--RPDE 1004 (1034)
T ss_pred eEeeehhcCCeeeeccC-CCCcchhh--------hhc----cCceeEEeccCcEEEEEecchhhhhhh-hhccc--cccc
Confidence 887 7421111100000 00000000 000 112344554555666774432111110 00011 1233
Q ss_pred cCcceeEEEecCCCcceEEEecCCCeEEE
Q 018675 317 HDMDVNSVQWSPGERRLLASASDDGMIKI 345 (352)
Q Consensus 317 h~~~i~~~~~sp~~~~~l~s~~~Dg~i~i 345 (352)
..+..++++-.|-+..+| .|.+-|.|.+
T Consensus 1005 f~G~lTala~LPLN~afL-aGne~G~IaL 1032 (1034)
T KOG4190|consen 1005 FPGTLTALAPLPLNCAFL-AGNEHGAIAL 1032 (1034)
T ss_pred cCCccceeeeccccchhh-ccCCCCceee
Confidence 456788899888776544 6888888875
No 247
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.14 E-value=1.5e-08 Score=89.97 Aligned_cols=189 Identities=20% Similarity=0.285 Sum_probs=134.8
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecce-ecceEEE------EECC--------------CCCEEEEEeCCCc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH-TRTVRSC------AWSP--------------SGKLLATASFDAT 97 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h-~~~v~~~------~~s~--------------~~~~l~s~~~d~~ 97 (352)
..+||....||.+|+|+...++..-.. ....| .+.-++. ..+| +-.+++-|...|.
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~---~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEF---APIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeee---ccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 578999999999999997665311000 00001 1111111 1122 3347788889999
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
|.+|+...++..-...-.+|.+.|.++.++.+-..|.+++.|+.+..|+..... .++.+.+....+.+++.+|++.+
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~---~~~~~~~~~~~~~sl~is~D~~~ 158 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV---IIRIWKEQKPLVSSLCISPDGKI 158 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccce---eeeeeccCCCccceEEEcCCCCE
Confidence 999998777655444447899999999999888899999999999999986543 45566677778889999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-----CCEEEEE-eCCCcEEEEcCC
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-----GDKLVSC-SDDLTIKIWGAD 244 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-----~~~l~s~-~~dg~i~iwd~~ 244 (352)
+++|+ +.|++|+++.. +.+.++ .||.++|.++.|--+ |.++.++ ..+.-+.+|-.+
T Consensus 159 l~~as--~~ik~~~~~~k-----evv~~f----tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 159 LLTAS--RQIKVLDIETK-----EVVITF----TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred EEecc--ceEEEEEccCc-----eEEEEe----cCCCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 98876 78999987654 233333 489999999999766 6666654 456678888543
No 248
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.14 E-value=1.2e-06 Score=77.78 Aligned_cols=244 Identities=13% Similarity=0.146 Sum_probs=145.3
Q ss_pred CcEEEEEc--cCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC----CCcEEEEecCCC-CeeEEEEEeecCccCeeE
Q 018675 96 ATTCIWED--VGGDYECVATLEGHENEVKSVSWNASGTLLATCGR----DKSVWIWEVMPG-NEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 96 ~~i~i~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~----d~~v~vwd~~~~-~~~~~~~~~~~h~~~v~~ 168 (352)
+.|..|+. .++++..+.... -......+.++|++++|+++.+ ++.|..|++... .....+..........+.
T Consensus 13 ~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~ 91 (345)
T PF10282_consen 13 GGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCH 91 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEE
T ss_pred CcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEE
Confidence 56776655 445544444332 2345667889999999998877 469999998765 455555544433345578
Q ss_pred EEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeee------ccCCCCcccEEEEEEcCCCCEEEEEeC-CCcEEE
Q 018675 169 VQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTIS------ESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKI 240 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~------~~~~~h~~~i~~l~~~~~~~~l~s~~~-dg~i~i 240 (352)
++++|++++|+++.. ++.+.++++..... ......... ...........++.++|+++++++... ...|.+
T Consensus 92 i~~~~~g~~l~vany~~g~v~v~~l~~~g~-l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~ 170 (345)
T PF10282_consen 92 IAVDPDGRFLYVANYGGGSVSVFPLDDDGS-LGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYV 170 (345)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSE-EEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred EEEecCCCEEEEEEccCCeEEEEEccCCcc-cceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEE
Confidence 999999999888875 88999998765311 111111110 000112345778999999998887643 457888
Q ss_pred EcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCC-ccccCcccceeeeccccc
Q 018675 241 WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKD-DLIDGPSYKMLLKKEKAH 317 (352)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~-~~~~~~~~~~~~~~~~~h 317 (352)
|+++.... .......+..........+.+++++ .++....++.|.++..... ..+........+......
T Consensus 171 ~~~~~~~~-------~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 243 (345)
T PF10282_consen 171 YDIDDDTG-------KLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTG 243 (345)
T ss_dssp EEE-TTS--------TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCS
T ss_pred EEEeCCCc-------eEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccc
Confidence 87653210 0111222222345567888899886 4566677888888866521 111000000000010111
Q ss_pred CcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 318 DMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 318 ~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
......|+++||++.++++......|-+|++
T Consensus 244 ~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~ 274 (345)
T PF10282_consen 244 ENAPAEIAISPDGRFLYVSNRGSNSISVFDL 274 (345)
T ss_dssp SSSEEEEEE-TTSSEEEEEECTTTEEEEEEE
T ss_pred cCCceeEEEecCCCEEEEEeccCCEEEEEEE
Confidence 2257889999999999999988999999998
No 249
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.11 E-value=4.2e-08 Score=89.67 Aligned_cols=190 Identities=16% Similarity=0.211 Sum_probs=117.0
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCC---CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE-E
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGD---KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT-A 92 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D---~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~ 92 (352)
+..+...+.+..|+|+ ++.++.++.+ ..|.+|++.++... . + ..+...+.+++|+|||+.|+. .
T Consensus 185 l~~~~~~~~~p~~Spd------g~~la~~~~~~~~~~i~v~d~~~g~~~----~-~-~~~~~~~~~~~~spDg~~l~~~~ 252 (417)
T TIGR02800 185 ITRSREPILSPAWSPD------GQKLAYVSFESGKPEIYVQDLATGQRE----K-V-ASFPGMNGAPAFSPDGSKLAVSL 252 (417)
T ss_pred eecCCCceecccCCCC------CCEEEEEEcCCCCcEEEEEECCCCCEE----E-e-ecCCCCccceEECCCCCEEEEEE
Confidence 3445667888889997 4667766543 47999998765321 1 1 113445677899999987764 4
Q ss_pred eCCC--cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CC--cEEEEecCCCCeeEEEEEeecCccCee
Q 018675 93 SFDA--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DK--SVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 93 ~~d~--~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
+.++ .|.+|+..++.. ..+..+........|+|+++.|+.++. ++ .|.++++..+.. ..+..+.....
T Consensus 253 ~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~----~~l~~~~~~~~ 325 (417)
T TIGR02800 253 SKDGNPDIYVMDLDGKQL---TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV----RRLTFRGGYNA 325 (417)
T ss_pred CCCCCccEEEEECCCCCE---EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE----EEeecCCCCcc
Confidence 4444 477777665533 233344445567789999998776654 33 466667654332 12222334556
Q ss_pred EEEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 168 MVQWHPTMDVLFSCSYDN---TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
...|+|++..++.++.++ .|.+|++.... . ..+... .......|+|++++|+..+.++
T Consensus 326 ~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~---~---~~l~~~-----~~~~~p~~spdg~~l~~~~~~~ 386 (417)
T TIGR02800 326 SPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG---E---RVLTDT-----GLDESPSFAPNGRMILYATTRG 386 (417)
T ss_pred CeEECCCCCEEEEEEccCCceEEEEEeCCCCC---e---EEccCC-----CCCCCceECCCCCEEEEEEeCC
Confidence 788999999988877765 67777654321 1 112111 1123457999999888776554
No 250
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.10 E-value=1.2e-07 Score=86.56 Aligned_cols=155 Identities=18% Similarity=0.242 Sum_probs=98.9
Q ss_pred eecceEEEEECCCCCEEEEEeCC---CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCCC--cEEEEe
Q 018675 73 HTRTVRSCAWSPSGKLLATASFD---ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDK--SVWIWE 146 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d---~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~--~v~vwd 146 (352)
+...+...+|+|||+.|+.+..+ ..+.+|+..++.... +..+.+.+.+++|+|+++.|+ +.+.++ .|.+|+
T Consensus 188 ~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~---~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d 264 (417)
T TIGR02800 188 SREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK---VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMD 264 (417)
T ss_pred CCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE---eecCCCCccceEECCCCCEEEEEECCCCCccEEEEE
Confidence 44568889999999999887654 478899887664332 233455677899999998765 444444 578888
Q ss_pred cCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CC--cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 147 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DN--TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
+..+.. ..+..+........|+|+++.++..+. ++ .|.+++..... ...+. .+...+....|+
T Consensus 265 ~~~~~~----~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~------~~~l~----~~~~~~~~~~~s 330 (417)
T TIGR02800 265 LDGKQL----TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE------VRRLT----FRGGYNASPSWS 330 (417)
T ss_pred CCCCCE----EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC------EEEee----cCCCCccCeEEC
Confidence 764432 222333333456789999998776654 34 35555543221 11221 123445678899
Q ss_pred CCCCEEEEEeCCC---cEEEEcCC
Q 018675 224 AKGDKLVSCSDDL---TIKIWGAD 244 (352)
Q Consensus 224 ~~~~~l~s~~~dg---~i~iwd~~ 244 (352)
|++++++.++.++ .|.+||+.
T Consensus 331 pdg~~i~~~~~~~~~~~i~~~d~~ 354 (417)
T TIGR02800 331 PDGDLIAFVHREGGGFNIAVMDLD 354 (417)
T ss_pred CCCCEEEEEEccCCceEEEEEeCC
Confidence 9999998877765 56666654
No 251
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.07 E-value=3.8e-08 Score=87.32 Aligned_cols=248 Identities=15% Similarity=0.229 Sum_probs=143.8
Q ss_pred eecceEEEEECCCCCEE-EEEeCCCcEEEEEccCCceeeeEeecccc-CC-eeEEEECCCCcEEEEeeCCCcEEEEecCC
Q 018675 73 HTRTVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEGHE-NE-VKSVSWNASGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l-~s~~~d~~i~i~~~~~~~~~~~~~~~~h~-~~-v~~v~~~~~~~~l~s~~~d~~v~vwd~~~ 149 (352)
|...-+.+..+|||+++ |+|..-..|++||..+-. ..+.-|. .. |.-.-.+-|-..++--..|++|-+... -
T Consensus 50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLS----LKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak-~ 124 (703)
T KOG2321|consen 50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLS----LKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAK-Y 124 (703)
T ss_pred CccccceeEecCCCcEEEEecccCCceEEEEcccce----eeeeecccccceeEEEeccchhhheEeecCceeeehhh-c
Confidence 56677889999999985 677788899999875432 2233232 23 333333444444555667777766542 1
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
+.- ..... ......+.++.-..-|+.++....|.=++++... + +..+ ......++++..++-..+|
T Consensus 125 G~h-y~~RI----P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGr---f--L~P~----~~~~~~lN~v~in~~hgLl 190 (703)
T KOG2321|consen 125 GRH-YRTRI----PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGR---F--LNPF----ETDSGELNVVSINEEHGLL 190 (703)
T ss_pred Cee-eeeec----CcCCccccccCCCccEEEeecCcceEEEEccccc---c--cccc----ccccccceeeeecCccceE
Confidence 110 00110 1123345554322224444444445444444321 1 1111 1234689999999999999
Q ss_pred EEEeCCCcEEEEcCCccccccCCCCccceeeEEee-cccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccc
Q 018675 230 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS-GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
++|+.+|.|-+||.+............. ..... ......++++.|..++ .++.|..+|.+.+|+....
T Consensus 191 a~Gt~~g~VEfwDpR~ksrv~~l~~~~~--v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~-------- 260 (703)
T KOG2321|consen 191 ACGTEDGVVEFWDPRDKSRVGTLDAASS--VNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRAS-------- 260 (703)
T ss_pred EecccCceEEEecchhhhhheeeecccc--cCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccC--------
Confidence 9999999999999764332211111000 00000 1123458899999877 6899999999999965431
Q ss_pred ceeeecccccCcceeEEEecCCCc-ceEEEecCCCeEEEEeecc
Q 018675 308 KMLLKKEKAHDMDVNSVQWSPGER-RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 308 ~~~~~~~~~h~~~i~~~~~sp~~~-~~l~s~~~Dg~i~iw~~~~ 350 (352)
..++...++...+|..+.|.+.+. ..++|.. -..++|||-..
T Consensus 261 ~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~D-k~~~kiWd~~~ 303 (703)
T KOG2321|consen 261 KPLLVKDHGYELPIKKLDWQDTDQQNKVVSMD-KRILKIWDECT 303 (703)
T ss_pred CceeecccCCccceeeecccccCCCceEEecc-hHHhhhccccc
Confidence 233445566778999999976532 3354443 45699998654
No 252
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.07 E-value=3.7e-07 Score=90.02 Aligned_cols=234 Identities=18% Similarity=0.260 Sum_probs=133.4
Q ss_pred ceEEEEECCCCCEEEEEeC---C---CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC---CCcEEEEe
Q 018675 76 TVRSCAWSPSGKLLATASF---D---ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR---DKSVWIWE 146 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~---d---~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~v~vwd 146 (352)
.-..++|-.||.++|+.+. . ..+++|+-. |. ...+.+.-.+--.+++|.|+|+++++... ...|.+|.
T Consensus 211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~--L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE 287 (928)
T PF04762_consen 211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GE--LQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE 287 (928)
T ss_pred CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ce--EEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe
Confidence 3456889999999998774 2 478899754 32 22333333334457899999999998865 34566665
Q ss_pred cCCCCeeEEEEE-eecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 147 VMPGNEFECVSV-LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 147 ~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
- .|-....... +......+..+.|++++..|+.--.|. |.+|...+- .|+..+.+... ....+..+.|+|.
T Consensus 288 r-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY---HWYLKqei~~~---~~~~~~~~~Wdpe 359 (928)
T PF04762_consen 288 R-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNY---HWYLKQEIRFS---SSESVNFVKWDPE 359 (928)
T ss_pred c-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCC---EEEEEEEEEcc---CCCCCCceEECCC
Confidence 2 3322111111 113445789999999999998866555 999954432 25555555321 1233445999996
Q ss_pred CC-EEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC-CceEEecCCCCeEEEEEccCCcccc
Q 018675 226 GD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLID 303 (352)
Q Consensus 226 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~v~~~~~~~~~~~~ 303 (352)
.. .|...+.+|.+..++...... .... ..+ +.-+++.-+...+.+-......
T Consensus 360 ~p~~L~v~t~~g~~~~~~~~~~v~--------------~s~~---------~~~~D~g~vaVIDG~~lllTpf~~a~--- 413 (928)
T PF04762_consen 360 KPLRLHVLTSNGQYEIYDFAWDVS--------------RSPG---------SSPNDNGTVAVIDGNKLLLTPFRRAV--- 413 (928)
T ss_pred CCCEEEEEecCCcEEEEEEEEEEE--------------ecCC---------CCccCceEEEEEeCCeEEEecccccC---
Confidence 54 466667668887775421100 0000 001 1111222222234443222111
Q ss_pred CcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 304 ~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
-+.++ ...+ .....+|++++|++++.. ++.-..||.|.+|+..
T Consensus 414 VPPPM-s~~~-l~~~~~v~~vaf~~~~~~-~avl~~d~~l~~~~~~ 456 (928)
T PF04762_consen 414 VPPPM-SSYE-LELPSPVNDVAFSPSNSR-FAVLTSDGSLSIYEWD 456 (928)
T ss_pred CCchH-hceE-EcCCCCcEEEEEeCCCCe-EEEEECCCCEEEEEec
Confidence 11111 1111 234578999999998764 6778889999999853
No 253
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.07 E-value=9.8e-08 Score=78.07 Aligned_cols=271 Identities=15% Similarity=0.187 Sum_probs=160.5
Q ss_pred CeEEEEecCCCceeeeeeeeeecceecceEEEEEC---CCCC-EEEEEeCCCcEEEEEccCCceeeeEeecccc------
Q 018675 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS---PSGK-LLATASFDATTCIWEDVGGDYECVATLEGHE------ 118 (352)
Q Consensus 49 ~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s---~~~~-~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~------ 118 (352)
|.+.+|++...+..- ....... -+..+..+.|. .+|. .++-+-.+|.|.+|..... ....++.+-.
T Consensus 46 Gkl~Lys~~d~~~~~-l~~~q~~-dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~--~ss~~L~~ls~~ki~~ 121 (339)
T KOG0280|consen 46 GKLHLYSLEDMKLSP-LDTLQCT-DTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDED--ESSVHLRGLSSKKISV 121 (339)
T ss_pred cceEEEeecccccCc-cceeeee-cccccceeeeeeccCCccceeeeccccceEEEEeeccc--eeeeeecccchhhhhh
Confidence 567777765543211 1111222 23445556664 2455 4566667888988864322 1122222211
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCC
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDS 197 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~ 197 (352)
..--++.|++.+..++++-.+|.+.+-+... ...+.+..++.|..+++.+.|+... +.+.+|+.|+.+..||++-...
T Consensus 122 ~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~-~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~ 200 (339)
T KOG0280|consen 122 VEALSLDISTSGTKIFVSDSRGSISGVYETE-MVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT 200 (339)
T ss_pred eeeeEEEeeccCceEEEEcCCCcEEEEecce-eeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc
Confidence 1234778899999999988889888544322 2233345678899999999987643 5788999999999999873321
Q ss_pred CCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCc-cccccCCCCccceeeEEeecccCcceEEEE
Q 018675 198 DNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRHLCTISGYHDRTIFSVH 275 (352)
Q Consensus 198 ~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 275 (352)
+ +......|...|.++.-+|. ..++++|+-|..|++||.+. .+.... ....+.++.+.
T Consensus 201 --~-----i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~-------------~~v~GGVWRi~ 260 (339)
T KOG0280|consen 201 --F-----IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFK-------------AKVGGGVWRIK 260 (339)
T ss_pred --e-----eeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCcccc-------------CccccceEEEE
Confidence 1 11122358889999988874 77899999999999999873 222111 11234566676
Q ss_pred ecCCc---eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEe-cCCCeEE-EEeecc
Q 018675 276 WSREG---IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA-SDDGMIK-IWELAN 350 (352)
Q Consensus 276 ~~~~~---~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~-~~Dg~i~-iw~~~~ 350 (352)
..|.. .++++..+|. ++.....+.. .....+.....|.+-++.-.|.... -+|||+ ..|+.|+ +|-..+
T Consensus 261 ~~p~~~~~lL~~CMh~G~-ki~~~~~~~~----e~~~~~~s~~~hdSl~YG~DWd~~~-~~lATCsFYDk~~~~~Wl~~t 334 (339)
T KOG0280|consen 261 HHPEIFHRLLAACMHNGA-KILDSSDKVL----EFQIVLPSDKIHDSLCYGGDWDSKD-SFLATCSFYDKKIRQLWLHIT 334 (339)
T ss_pred ecchhhhHHHHHHHhcCc-eEEEeccccc----chheeeeccccccceeecccccccc-ceeeeeeccccceeeeeeecc
Confidence 66643 2555555553 2222211100 0111233456777777777784432 357775 4688766 886543
No 254
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.05 E-value=9.6e-07 Score=72.42 Aligned_cols=243 Identities=17% Similarity=0.256 Sum_probs=126.7
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEccC--CceeeeEee-ccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEE
Q 018675 80 CAWSPSGKLLATASFDATTCIWEDVG--GDYECVATL-EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 80 ~~~s~~~~~l~s~~~d~~i~i~~~~~--~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 156 (352)
++.+.+|+.||.- .|..|-|-.... ........+ +...-.-+.++|+||+.+||.+...|+|+++|+.... .-.+
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I 80 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVI 80 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEc
Confidence 3456778877754 455555543221 111111111 1122345789999999999999999999999986332 1111
Q ss_pred EE---eec-CccCeeEEEEcCC------CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC
Q 018675 157 SV---LQG-HAQDVKMVQWHPT------MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226 (352)
Q Consensus 157 ~~---~~~-h~~~v~~~~~~~~------~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~ 226 (352)
.. ..+ -...|..+.|-+- ...|++-..+|.++-|.+...+...++..+++.. ...+...|.++.++|..
T Consensus 81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf-~~~yp~Gi~~~vy~p~h 159 (282)
T PF15492_consen 81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSF-SSHYPHGINSAVYHPKH 159 (282)
T ss_pred CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEe-cccCCCceeEEEEcCCC
Confidence 11 111 1134555555432 1246777788888888764433344444444432 12346789999999998
Q ss_pred CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEec-CCceEEecCCCCeEEEEEccCCccccCc
Q 018675 227 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS-REGIIASGAADDSVQFFVESKDDLIDGP 305 (352)
Q Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~s~~~d~~v~~~~~~~~~~~~~~ 305 (352)
++|+.||.... + +........++..|+.+.. .+-+..... .++.-......+..++.
T Consensus 160 ~LLlVgG~~~~----~-~~~s~a~~~GLtaWRiL~~------~Pyyk~v~~~~~~~~~~~~~~~~~~~~----------- 217 (282)
T PF15492_consen 160 RLLLVGGCEQN----Q-DGMSKASSCGLTAWRILSD------SPYYKQVTSSEDDITASSKRRGLLRIP----------- 217 (282)
T ss_pred CEEEEeccCCC----C-CccccccccCceEEEEcCC------CCcEEEccccCccccccccccceeecc-----------
Confidence 88777664322 0 0001112334444543311 111110000 01111111111111100
Q ss_pred ccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 306 SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 306 ~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
..+ +......-...|..+..|||++ +||+...+|.|.+|++.
T Consensus 218 ~~~-~fs~~~~~~d~i~kmSlSPdg~-~La~ih~sG~lsLW~iP 259 (282)
T PF15492_consen 218 SFK-FFSRQGQEQDGIFKMSLSPDGS-LLACIHFSGSLSLWEIP 259 (282)
T ss_pred cee-eeeccccCCCceEEEEECCCCC-EEEEEEcCCeEEEEecC
Confidence 000 0011122356799999999996 78999999999999985
No 255
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.03 E-value=2.5e-08 Score=83.18 Aligned_cols=248 Identities=16% Similarity=0.225 Sum_probs=161.4
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEee-ccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL-EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~ 149 (352)
+.|.+.|++...-|-..-+++.+.|.++++|...+... -.-.+ ..-..+++++.+.+....|+.|-..|++.-+.+..
T Consensus 21 eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q-~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~se 99 (404)
T KOG1409|consen 21 EGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQ-YWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSE 99 (404)
T ss_pred cCchhhhhhheeccCCCCeEEccccceeeeEEeccccc-cCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhh
Confidence 34667788887888778899999999999996543221 11111 12246788899999888999999999988876532
Q ss_pred -CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC-CceeEeeeeccCCCCcccEEEEEEcCCCC
Q 018675 150 -GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD-NWHCVQTISESNNGHSSTIWALSFNAKGD 227 (352)
Q Consensus 150 -~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~h~~~i~~l~~~~~~~ 227 (352)
.+.+...+....|...+..+-|+.....+++.+.|..+. |........ ..+. +. ....++.+.-.
T Consensus 100 dfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~-~hc~e~~~~lg~Y~---~~-------~~~t~~~~d~~-- 166 (404)
T KOG1409|consen 100 DFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFA-WHCTESGNRLGGYN---FE-------TPASALQFDAL-- 166 (404)
T ss_pred hhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceE-EEeeccCCcccceE---ee-------ccCCCCceeeE--
Confidence 122233455668999999999988888899999998764 432221111 0000 00 01111111111
Q ss_pred EEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC-ceEEecCCCCeEEEEEccCCccccCcc
Q 018675 228 KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPS 306 (352)
Q Consensus 228 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~v~~~~~~~~~~~~~~~ 306 (352)
+...|...|.|..-.+.... ...+.++. .|...++++.|++. +.+.+|..|..+.+|+....
T Consensus 167 ~~fvGd~~gqvt~lr~~~~~---------~~~i~~~~-~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~------- 229 (404)
T KOG1409|consen 167 YAFVGDHSGQITMLKLEQNG---------CQLITTFN-GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGR------- 229 (404)
T ss_pred EEEecccccceEEEEEeecC---------CceEEEEc-CcccceEEEEEcCCCcEEEeccccCceEEEeccCC-------
Confidence 34455556665555332111 11223332 47788999999985 58999999999999976431
Q ss_pred cceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 307 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 307 ~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+.+..++.+|...|..+...+.-++ +.|+++||.|-+|++..+
T Consensus 230 -~g~~~el~gh~~kV~~l~~~~~t~~-l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 230 -KGTAYELQGHNDKVQALSYAQHTRQ-LISCGEDGGIVVWNMNVK 272 (404)
T ss_pred -cceeeeeccchhhhhhhhhhhhhee-eeeccCCCeEEEEeccce
Confidence 2334567899999999988776655 669999999999998654
No 256
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.01 E-value=5.6e-09 Score=95.09 Aligned_cols=297 Identities=18% Similarity=0.265 Sum_probs=172.0
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC---CEEEEEeCCCcE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG---KLLATASFDATT 98 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~~~d~~i 98 (352)
+.+..+..+|. +.-+|.++.-|-+. -++..+. ++..-+.....-.|-.+.|+|.. ..+++-+. ..-
T Consensus 25 ~~~~a~si~p~------grdi~lAsr~gl~i-~dld~p~---~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~-qka 93 (1081)
T KOG0309|consen 25 GGFNAVSINPS------GRDIVLASRQGLYI-IDLDDPF---TPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSN-QKA 93 (1081)
T ss_pred Ccccceeeccc------cchhhhhhhcCeEE-EeccCCC---CCceeeeccCcchhcceecccCCCCceeEEecCc-chh
Confidence 45667777885 33466666655543 3444332 11111111122356677888754 34444443 444
Q ss_pred EEEEccC-CceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 99 CIWEDVG-GDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 99 ~i~~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
.+|+... .....-..+.+|..+|+.+-|+|.. ..+++++-|-.+..||++.... ++.....-......+.|+.-..
T Consensus 94 iiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~--p~ys~~~w~s~asqVkwnyk~p 171 (1081)
T KOG0309|consen 94 IIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR--PFYSTSSWRSAASQVKWNYKDP 171 (1081)
T ss_pred hhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc--ceeeeecccccCceeeecccCc
Confidence 4676532 2222334567999999999999854 5799999999999999976542 2333333334567788987666
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCccccccCCCCc
Q 018675 177 VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADITRMQSGDGYA 255 (352)
Q Consensus 177 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (352)
.+.+.+..+.|.+|+.+.... .+..+ ++|...|++++|+.- ...+.+++.||+|++||-.....
T Consensus 172 ~vlasshg~~i~vwd~r~gs~----pl~s~----K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~------- 236 (1081)
T KOG0309|consen 172 NVLASSHGNDIFVWDLRKGST----PLCSL----KGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT------- 236 (1081)
T ss_pred chhhhccCCceEEEeccCCCc----ceEEe----cccceeeehHHHhhhhhhhhcccCCCCceeeeccccccc-------
Confidence 677778888999998754321 12222 368888999998764 45688999999999998542211
Q ss_pred cceeeEEeecccCcceEEEEecC--CceEEecCCCCe-EEEEEccCCccc-cCcccceeeecccccCcceeEEEecCC--
Q 018675 256 SWRHLCTISGYHDRTIFSVHWSR--EGIIASGAADDS-VQFFVESKDDLI-DGPSYKMLLKKEKAHDMDVNSVQWSPG-- 329 (352)
Q Consensus 256 ~~~~~~~~~~~~~~~i~~~~~~~--~~~~~s~~~d~~-v~~~~~~~~~~~-~~~~~~~~~~~~~~h~~~i~~~~~sp~-- 329 (352)
.|+... .....++...+.| +++++.-...+. +.++.....++. +.......+..+.||...|..+-|--.
T Consensus 237 e~~~~v----tt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e 312 (1081)
T KOG0309|consen 237 ESKRTV----TTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKE 312 (1081)
T ss_pred ccceec----cccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhccc
Confidence 011100 0112233333333 344444433333 223322211111 111122345567899888876666321
Q ss_pred ------C-cceEEEecCCCeEEEEeecc
Q 018675 330 ------E-RRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 330 ------~-~~~l~s~~~Dg~i~iw~~~~ 350 (352)
. ..-|+|-|.|.++|+|-+.+
T Consensus 313 ~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 313 CDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred ccCCCCccceeEEEeecCCceEeeeccH
Confidence 1 13478999999999998764
No 257
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.00 E-value=4.7e-07 Score=83.05 Aligned_cols=155 Identities=19% Similarity=0.226 Sum_probs=94.3
Q ss_pred eecceEEEEECCCCCEEEEEeCC---CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCCC--cEEEEe
Q 018675 73 HTRTVRSCAWSPSGKLLATASFD---ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDK--SVWIWE 146 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d---~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~--~v~vwd 146 (352)
+...+....|+|||+.|+..+.+ ..|.+|+..+++...+. ...+.+....|+|+|+.|+ +.+.++ .|.++|
T Consensus 197 ~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~---~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d 273 (430)
T PRK00178 197 SREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQIT---NFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMD 273 (430)
T ss_pred CCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEcc---CCCCCcCCeEECCCCCEEEEEEccCCCceEEEEE
Confidence 45678899999999999877654 35777887766544332 2234455789999999776 455555 577778
Q ss_pred cCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CCc--EEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 147 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DNT--IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~--i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
+..+.. ..+..+........|+|+++.++..+. ++. |.++++.... . ..+.. .+ .......|+
T Consensus 274 ~~~~~~----~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~---~---~~lt~--~~--~~~~~~~~S 339 (430)
T PRK00178 274 LASRQL----SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR---A---ERVTF--VG--NYNARPRLS 339 (430)
T ss_pred CCCCCe----EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC---E---EEeec--CC--CCccceEEC
Confidence 765432 223334444566789999987765553 444 5555543321 1 11111 01 122346799
Q ss_pred CCCCEEEEEeC-CC--cEEEEcCC
Q 018675 224 AKGDKLVSCSD-DL--TIKIWGAD 244 (352)
Q Consensus 224 ~~~~~l~s~~~-dg--~i~iwd~~ 244 (352)
|+|++++..+. ++ .|.++|+.
T Consensus 340 pdg~~i~~~~~~~~~~~l~~~dl~ 363 (430)
T PRK00178 340 ADGKTLVMVHRQDGNFHVAAQDLQ 363 (430)
T ss_pred CCCCEEEEEEccCCceEEEEEECC
Confidence 99999886654 33 35556653
No 258
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.98 E-value=8.6e-07 Score=81.39 Aligned_cols=152 Identities=17% Similarity=0.237 Sum_probs=91.2
Q ss_pred eecceEEEEECCCCCEEEEEeCC-C--cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEE-eeCCCc--EEEEe
Q 018675 73 HTRTVRSCAWSPSGKLLATASFD-A--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT-CGRDKS--VWIWE 146 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d-~--~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s-~~~d~~--v~vwd 146 (352)
+...+.+..|+|||+.|+..+.+ + .|.++|..+++...+.... +......|+|+|+.|+. .+.++. |.++|
T Consensus 216 ~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~---g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d 292 (448)
T PRK04792 216 SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP---GINGAPRFSPDGKKLALVLSKDGQPEIYVVD 292 (448)
T ss_pred CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC---CCcCCeeECCCCCEEEEEEeCCCCeEEEEEE
Confidence 34577889999999998876543 3 4667777666543333332 33457899999997664 566665 66667
Q ss_pred cCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CCcEEEE--ecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 147 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DNTIKVW--WAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~i~iw--~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
+..+.. ..+..+........|+|+++.++..+. ++...+| ++.... . ..+.. .+ .......|+
T Consensus 293 l~tg~~----~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~---~---~~Lt~--~g--~~~~~~~~S 358 (448)
T PRK04792 293 IATKAL----TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK---V---SRLTF--EG--EQNLGGSIT 358 (448)
T ss_pred CCCCCe----EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC---E---EEEec--CC--CCCcCeeEC
Confidence 654432 223334444567889999997765553 4444454 443221 1 11211 11 122346899
Q ss_pred CCCCEEEEEeC-CCcEEEE
Q 018675 224 AKGDKLVSCSD-DLTIKIW 241 (352)
Q Consensus 224 ~~~~~l~s~~~-dg~i~iw 241 (352)
|+|++|+..+. ++...||
T Consensus 359 pDG~~l~~~~~~~g~~~I~ 377 (448)
T PRK04792 359 PDGRSMIMVNRTNGKFNIA 377 (448)
T ss_pred CCCCEEEEEEecCCceEEE
Confidence 99998876554 4555555
No 259
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.97 E-value=2.1e-07 Score=75.24 Aligned_cols=207 Identities=11% Similarity=0.070 Sum_probs=132.9
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEE-ECCCCCEEEEEeCCCcEEEEEcc
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCA-WSPSGKLLATASFDATTCIWEDV 104 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~-~s~~~~~l~s~~~d~~i~i~~~~ 104 (352)
.+.|.|..- -.+...||.||+-|.+.+|...+.......- ..|...|+-+. ..-..-.+..++.|.++++.+..
T Consensus 72 g~~F~p~s~-~~kc~~la~gG~~g~fd~~~~~tn~~h~~~c----d~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~ 146 (344)
T KOG4532|consen 72 GMTFTPGSF-INKCVTLADGGASGQFDLFACNTNDGHLYQC----DVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVS 146 (344)
T ss_pred cccccchHh-hccccEEEeccccceeeeecccCcccceeee----cccccchhhhhhhcccccceeeccCCcceeEEEEe
Confidence 578888532 2234679999999999999987654332111 11222111100 00012235667899999998876
Q ss_pred CCceeeeEeeccccC--CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe
Q 018675 105 GGDYECVATLEGHEN--EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 105 ~~~~~~~~~~~~h~~--~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
.+...... |.. .+.++++++++.++++.++...|..|.+.....+............--+..|+.....+|++.
T Consensus 147 ~~s~~~~~----h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~ 222 (344)
T KOG4532|consen 147 GDSNKFAV----HNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVF 222 (344)
T ss_pred cCccccee----eccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEe
Confidence 54322222 333 378899999999999999999999999876554332212222333445778999889999999
Q ss_pred CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC--EEEEEeCCCcEEEEcCCc
Q 018675 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD--KLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 183 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~--~l~s~~~dg~i~iwd~~~ 245 (352)
+||.+.|||++.-.. ...++......|.+.+..+.|++-|. +|.-.-.-+.+.+.|++.
T Consensus 223 Qdg~~~I~DVR~~~t----pm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~ 283 (344)
T KOG4532|consen 223 QDGTCAIYDVRNMAT----PMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN 283 (344)
T ss_pred cCCcEEEEEeccccc----chhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence 999999999875321 11223334456889999999998653 344444457888888764
No 260
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=98.97 E-value=4.9e-07 Score=80.48 Aligned_cols=287 Identities=14% Similarity=0.182 Sum_probs=165.1
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeeccee--cceEEEEECCCCCEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT--RTVRSCAWSPSGKLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l 89 (352)
++++.| +|...-+.|..+|+. .-.+|||-.--.|++||+..-. .+ + ..|. ..|.-.-++-|=..+
T Consensus 43 eLiQdf-e~p~ast~ik~s~DG-----qY~lAtG~YKP~ikvydlanLS----LK--F-ERhlDae~V~feiLsDD~SK~ 109 (703)
T KOG2321|consen 43 ELIQDF-EMPTASTRIKVSPDG-----QYLLATGTYKPQIKVYDLANLS----LK--F-ERHLDAEVVDFEILSDDYSKS 109 (703)
T ss_pred HHHHhc-CCccccceeEecCCC-----cEEEEecccCCceEEEEcccce----ee--e-eecccccceeEEEeccchhhh
Confidence 344444 577777889999974 2457788889999999986421 11 1 1122 233333334333333
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEEC-CCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN-ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
+.=-.|.+|-+... .|. .....+. ..-+.++++ |++.+++.|+.+ .|.=+++..+.. +..+......+++
T Consensus 110 v~L~~DR~IefHak-~G~-hy~~RIP---~~GRDm~y~~~scDly~~gsg~-evYRlNLEqGrf---L~P~~~~~~~lN~ 180 (703)
T KOG2321|consen 110 VFLQNDRTIEFHAK-YGR-HYRTRIP---KFGRDMKYHKPSCDLYLVGSGS-EVYRLNLEQGRF---LNPFETDSGELNV 180 (703)
T ss_pred eEeecCceeeehhh-cCe-eeeeecC---cCCccccccCCCccEEEeecCc-ceEEEEcccccc---cccccccccccee
Confidence 33345555544321 110 0000111 111344444 455665555543 344455655543 3334445578899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeee--ccCCCC-----cccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS--ESNNGH-----SSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~--~~~~~h-----~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
+..++...+|++|+.+|.+.+||.+.... ..++. ...+.| ...|+++.|+.+|-.++.|+.+|.+.||
T Consensus 181 v~in~~hgLla~Gt~~g~VEfwDpR~ksr-----v~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iy 255 (703)
T KOG2321|consen 181 VSINEEHGLLACGTEDGVVEFWDPRDKSR-----VGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIY 255 (703)
T ss_pred eeecCccceEEecccCceEEEecchhhhh-----heeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEE
Confidence 99999988999999999999998665321 11221 111122 2359999999999999999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCC--ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCc
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE--GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 319 (352)
|++..+..... .....-+|..+.|.+. +-.+.......+++|+...+.. ... ..-..
T Consensus 256 DLRa~~pl~~k-----------dh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~--------~as--iEpt~ 314 (703)
T KOG2321|consen 256 DLRASKPLLVK-----------DHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKP--------MAS--IEPTS 314 (703)
T ss_pred EcccCCceeec-----------ccCCccceeeecccccCCCceEEecchHHhhhcccccCCc--------eee--ccccC
Confidence 99754321110 0112345667777654 2223333455788886532111 111 11234
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
.++++++-|++. ++.++-+++.+..|=
T Consensus 315 ~lND~C~~p~sG-m~f~Ane~~~m~~yy 341 (703)
T KOG2321|consen 315 DLNDFCFVPGSG-MFFTANESSKMHTYY 341 (703)
T ss_pred CcCceeeecCCc-eEEEecCCCcceeEE
Confidence 589999999875 777888888776553
No 261
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.95 E-value=8.4e-07 Score=81.39 Aligned_cols=195 Identities=15% Similarity=0.151 Sum_probs=113.3
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCC---CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE-E
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGD---KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT-A 92 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D---~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~ 92 (352)
+..|.+.+.+..|+|+ ++.|+..+.+ ..|.+|++.++.. .... ...+.+...+|+|||+.|+. .
T Consensus 194 l~~~~~~~~~p~wSpD------G~~la~~s~~~~~~~l~~~~l~~g~~----~~l~--~~~g~~~~~~~SpDG~~la~~~ 261 (430)
T PRK00178 194 LLQSREPILSPRWSPD------GKRIAYVSFEQKRPRIFVQNLDTGRR----EQIT--NFEGLNGAPAWSPDGSKLAFVL 261 (430)
T ss_pred EecCCCceeeeeECCC------CCEEEEEEcCCCCCEEEEEECCCCCE----EEcc--CCCCCcCCeEECCCCCEEEEEE
Confidence 4456678889999997 4667665543 3577788876532 1111 11234556899999998874 4
Q ss_pred eCCC--cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CC--cEEEEecCCCCeeEEEEEeecCccCee
Q 018675 93 SFDA--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DK--SVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 93 ~~d~--~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
..++ .|.++|..++... .+..+........|+|+|+.++..+. ++ .|.++++..+.. ..+ ...+ ....
T Consensus 262 ~~~g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~-~~l-t~~~--~~~~ 334 (430)
T PRK00178 262 SKDGNPEIYVMDLASRQLS---RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA-ERV-TFVG--NYNA 334 (430)
T ss_pred ccCCCceEEEEECCCCCeE---EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEe-ecCC--CCcc
Confidence 4455 4666777665432 23344555667899999998765553 33 466666654432 211 1112 2234
Q ss_pred EEEEcCCCCEEEEEeCC-C--cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC-CCcEEEE
Q 018675 168 MVQWHPTMDVLFSCSYD-N--TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-DLTIKIW 241 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d-~--~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~-dg~i~iw 241 (352)
...|+|+++.++..+.+ + .|.++++.... . ..+... .. .....|+|+|+.++-.+. +|.-++|
T Consensus 335 ~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~---~---~~lt~~--~~---~~~p~~spdg~~i~~~~~~~g~~~l~ 401 (430)
T PRK00178 335 RPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS---V---RILTDT--SL---DESPSVAPNGTMLIYATRQQGRGVLM 401 (430)
T ss_pred ceEECCCCCEEEEEEccCCceEEEEEECCCCC---E---EEccCC--CC---CCCceECCCCCEEEEEEecCCceEEE
Confidence 56899999988766543 3 46667654321 1 112111 11 113579999998876553 3444444
No 262
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.94 E-value=2.2e-07 Score=82.79 Aligned_cols=150 Identities=15% Similarity=0.205 Sum_probs=101.9
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccc-cCCeeEEEEC------C--------------CCcEEEEeeCCCc
Q 018675 83 SPSGKLLATASFDATTCIWEDVGGDYECVATLEGH-ENEVKSVSWN------A--------------SGTLLATCGRDKS 141 (352)
Q Consensus 83 s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h-~~~v~~v~~~------~--------------~~~~l~s~~~d~~ 141 (352)
.|.+.++|....||.+++|+...++...-.....| .+.-.+..|. | +...++-|...|.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 34567889999999999999766543222221122 1222333331 1 2236777888899
Q ss_pred EEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEE
Q 018675 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 221 (352)
Q Consensus 142 v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~ 221 (352)
|.++++..++. .....-.+|..+|.++.++.+-.++.+++.|..+..|+..... +..........+.+++
T Consensus 82 v~~ys~~~g~i-t~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~---------~~~~~~~~~~~~~sl~ 151 (541)
T KOG4547|consen 82 VLLYSVAGGEI-TAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV---------IIRIWKEQKPLVSSLC 151 (541)
T ss_pred EEEEEecCCeE-EEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccce---------eeeeeccCCCccceEE
Confidence 99999875542 2222334688999999999888899999999999999654321 1111223456788999
Q ss_pred EcCCCCEEEEEeCCCcEEEEcCC
Q 018675 222 FNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 222 ~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
++||+..+++++ +.|++||++
T Consensus 152 is~D~~~l~~as--~~ik~~~~~ 172 (541)
T KOG4547|consen 152 ISPDGKILLTAS--RQIKVLDIE 172 (541)
T ss_pred EcCCCCEEEecc--ceEEEEEcc
Confidence 999999998886 579999875
No 263
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.92 E-value=6.2e-07 Score=81.71 Aligned_cols=161 Identities=11% Similarity=0.063 Sum_probs=88.2
Q ss_pred cceEEEEECCCCCEEE---EEeCCCc--EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-----CCcEEE
Q 018675 75 RTVRSCAWSPSGKLLA---TASFDAT--TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-----DKSVWI 144 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~---s~~~d~~--i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-----d~~v~v 144 (352)
..+.+-.|+|||+.++ +...++. |.+.+..+++...+..+ .+......|+|||+.|+..+. |..+..
T Consensus 185 ~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~---~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~ 261 (428)
T PRK01029 185 SLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILAL---QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQS 261 (428)
T ss_pred CCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecC---CCCccceEECCCCCEEEEEECCCCCcceeEEE
Confidence 3456678999997532 3333444 55556666654444433 334556899999988776543 223444
Q ss_pred EecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 145 WEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 145 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
|++..+...........+........|+|+++.|+..+ .++...+|.+....... ....+. .+...+....|+
T Consensus 262 ~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~--~~~~lt----~~~~~~~~p~wS 335 (428)
T PRK01029 262 FSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQ--SPRLLT----KKYRNSSCPAWS 335 (428)
T ss_pred eecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccccc--ceEEec----cCCCCccceeEC
Confidence 66543211111222222222345678999999777655 46666666432110000 011121 122345678899
Q ss_pred CCCCEEEEEeCC---CcEEEEcCC
Q 018675 224 AKGDKLVSCSDD---LTIKIWGAD 244 (352)
Q Consensus 224 ~~~~~l~s~~~d---g~i~iwd~~ 244 (352)
|||+.|+..+.+ ..|.+||+.
T Consensus 336 PDG~~Laf~~~~~g~~~I~v~dl~ 359 (428)
T PRK01029 336 PDGKKIAFCSVIKGVRQICVYDLA 359 (428)
T ss_pred CCCCEEEEEEcCCCCcEEEEEECC
Confidence 999988866543 357777764
No 264
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=98.91 E-value=1.6e-07 Score=85.70 Aligned_cols=293 Identities=16% Similarity=0.270 Sum_probs=176.6
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeee-----------eeeeecceecceEEEEECCCCCE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC-----------KAVLEEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~-----------~~~~~~~h~~~v~~~~~s~~~~~ 88 (352)
......|+.|+... .++|.||.||.+++-.+++...-.+. .+.+ ..|+..|.-+.|+.+.+.
T Consensus 13 nnvkL~c~~WNke~------gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtL-eGH~~sV~vvTWNe~~QK 85 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKES------GYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTL-EGHNASVMVVTWNENNQK 85 (1189)
T ss_pred CCceEEEEEEcccC------CeEEeccccceeEEEEccccCCcccccccccccccchhhhh-ccCcceEEEEEecccccc
Confidence 34567899999875 58999999999999987654311111 1122 469999999999999999
Q ss_pred EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
|-+...+|.|.+|-.-.+.+..-..-.-..+.|.+++|+.+|..++-.-.||.|.|=.+...+.+. ..+++ .....
T Consensus 86 LTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwg--KeLkg--~~l~h 161 (1189)
T KOG2041|consen 86 LTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWG--KELKG--QLLAH 161 (1189)
T ss_pred ccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecc--hhcch--heccc
Confidence 999999999999976554432111111234568899999999999888888888775543222111 11221 12346
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc--eeEeeeeccCCCCcccEEEEEE--------cCCCCEEEEEeCCCcE
Q 018675 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW--HCVQTISESNNGHSSTIWALSF--------NAKGDKLVSCSDDLTI 238 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~--~~~~~~~~~~~~h~~~i~~l~~--------~~~~~~l~s~~~dg~i 238 (352)
+.|++|...++.+-..|.+.+||......... .|.-............|..+.| -|+...|+.|-..|++
T Consensus 162 v~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~ 241 (1189)
T KOG2041|consen 162 VLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRM 241 (1189)
T ss_pred eeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCcee
Confidence 78999988877787889999997654322211 1111111111112223555555 3577889999999988
Q ss_pred EEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCC---------eEEEEEccCCccccCcccc
Q 018675 239 KIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADD---------SVQFFVESKDDLIDGPSYK 308 (352)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~---------~v~~~~~~~~~~~~~~~~~ 308 (352)
.|---.. ... + ..+. ..-.+....|+++| .++.++.+. .+.++.+- .
T Consensus 242 QiMR~eN----D~~------P-vv~d--tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~----------G 298 (1189)
T KOG2041|consen 242 QIMRSEN----DPE------P-VVVD--TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY----------G 298 (1189)
T ss_pred hhhhhcC----CCC------C-eEEe--cccEeecceecCCCcEEEEccCcccccCccccceEEEeccc----------h
Confidence 7762110 000 0 0010 11235556788877 444444432 23333221 1
Q ss_pred eeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 309 ~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.+...++.-...|++++|-..|-+ +| -..|+.|.+=++
T Consensus 299 ~i~gtlkvpg~~It~lsWEg~gLr-iA-~AvdsfiyfanI 336 (1189)
T KOG2041|consen 299 HIVGTLKVPGSCITGLSWEGTGLR-IA-IAVDSFIYFANI 336 (1189)
T ss_pred hheEEEecCCceeeeeEEcCCceE-EE-EEecceEEEEee
Confidence 233344445678999999766654 33 444777765433
No 265
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.90 E-value=5.6e-09 Score=95.05 Aligned_cols=213 Identities=19% Similarity=0.332 Sum_probs=137.5
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
.+-||...|+.+.|+|.. +..+|||+.|-.+..|++.+.... .+....-| .....+.|+--...++..+..
T Consensus 109 ~lhghsraitd~n~~~q~-----pdVlatcsvdt~vh~wd~rSp~~p---~ys~~~w~-s~asqVkwnyk~p~vlasshg 179 (1081)
T KOG0309|consen 109 VLHGHSRAITDINFNPQH-----PDVLATCSVDTYVHAWDMRSPHRP---FYSTSSWR-SAASQVKWNYKDPNVLASSHG 179 (1081)
T ss_pred EEecCccceeccccCCCC-----CcceeeccccccceeeeccCCCcc---eeeeeccc-ccCceeeecccCcchhhhccC
Confidence 456999999999999964 578999999999999998765421 11111112 345678888754444445566
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
+.+.+||..-+. .++..+++|...|+.+.|+.. -..+.+++.|++|+.||-..... +... ...-..+++...+.|-
T Consensus 180 ~~i~vwd~r~gs-~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~-e~~~-~vtt~~piw~~r~~Pf 256 (1081)
T KOG0309|consen 180 NDIFVWDLRKGS-TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT-ESKR-TVTTNFPIWRGRYLPF 256 (1081)
T ss_pred CceEEEeccCCC-cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccc-ccce-eccccCcceecccccc
Confidence 789999986554 467788899999999998763 34688999999999999643211 1111 1122345666666665
Q ss_pred CC--EEEEEeCCCcEEEEecCCCCCC-----CceeEeeeeccCCCCcccEEEEEEcCCC----------CEEEEEeCCCc
Q 018675 175 MD--VLFSCSYDNTIKVWWAEDTDSD-----NWHCVQTISESNNGHSSTIWALSFNAKG----------DKLVSCSDDLT 237 (352)
Q Consensus 175 ~~--~l~s~~~d~~i~iw~~~~~~~~-----~~~~~~~~~~~~~~h~~~i~~l~~~~~~----------~~l~s~~~dg~ 237 (352)
+. ++.---.++.+.+++.++.+.. ....+++ ..||...|....|...+ -.|+|-+.|..
T Consensus 257 g~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~----F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~ 332 (1081)
T KOG0309|consen 257 GEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHT----FVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQT 332 (1081)
T ss_pred CceeEeccccCCeeeeeccccchhhhhccccCCcceee----ecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCc
Confidence 43 2222223345666655443221 1111222 34788877766664432 25999999999
Q ss_pred EEEEcCC
Q 018675 238 IKIWGAD 244 (352)
Q Consensus 238 i~iwd~~ 244 (352)
+|+|-+.
T Consensus 333 lrlWpI~ 339 (1081)
T KOG0309|consen 333 LRLWPID 339 (1081)
T ss_pred eEeeecc
Confidence 9999653
No 266
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.90 E-value=8e-06 Score=80.82 Aligned_cols=244 Identities=18% Similarity=0.278 Sum_probs=147.8
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEE----EccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC-
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIW----EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM- 148 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~----~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~- 148 (352)
...|.++.+-++...++.+..+|.|.+. +......+.+..+ +.+|.+.+||||+++|+....++++.+-+-.
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~v---d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f 151 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSV---DSGILAASWSPDEELLALVTGEGNLLLMTRDF 151 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEE---cCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence 3678999999999999999999999988 5545444444444 5689999999999999999888888775321
Q ss_pred ---------CC--CeeEEEE---------------------------------EeecCccCeeEEEEcCCCCEEEEEeC-
Q 018675 149 ---------PG--NEFECVS---------------------------------VLQGHAQDVKMVQWHPTMDVLFSCSY- 183 (352)
Q Consensus 149 ---------~~--~~~~~~~---------------------------------~~~~h~~~v~~~~~~~~~~~l~s~~~- 183 (352)
.. +..+.+. .+. +...-..++|..||.++++.+.
T Consensus 152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~ 230 (928)
T PF04762_consen 152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVE 230 (928)
T ss_pred eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEE
Confidence 00 0000000 011 2223456889999999987764
Q ss_pred -----CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC---CCcEEEEcCCccccccCCCCc
Q 018675 184 -----DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD---DLTIKIWGADITRMQSGDGYA 255 (352)
Q Consensus 184 -----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~ 255 (352)
-+.+++|+-+. .++...+...+-+. +|+|.|.|.++|+... ...|.+|.-+. +.
T Consensus 231 ~~~~~~R~iRVy~ReG-------~L~stSE~v~gLe~---~l~WrPsG~lIA~~q~~~~~~~VvFfErNG--------Lr 292 (928)
T PF04762_consen 231 PETGSRRVIRVYSREG-------ELQSTSEPVDGLEG---ALSWRPSGNLIASSQRLPDRHDVVFFERNG--------LR 292 (928)
T ss_pred cCCCceeEEEEECCCc-------eEEeccccCCCccC---CccCCCCCCEEEEEEEcCCCcEEEEEecCC--------cE
Confidence 25789995321 12223333333332 5799999999998764 34577774321 11
Q ss_pred cceeeEEee-cccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeeccc-ccCcceeEEEecCCCcce
Q 018675 256 SWRHLCTIS-GYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK-AHDMDVNSVQWSPGERRL 333 (352)
Q Consensus 256 ~~~~~~~~~-~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~sp~~~~~ 333 (352)
. ....+. ......+..+.|+.++.+.+.-....+++|..+.. ...++++.. .....+..+.|+|....-
T Consensus 293 h--geF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~NY-------HWYLKqei~~~~~~~~~~~~Wdpe~p~~ 363 (928)
T PF04762_consen 293 H--GEFTLRFDPEEEKVIELAWNSDSEILAVWLEDRVQLWTRSNY-------HWYLKQEIRFSSSESVNFVKWDPEKPLR 363 (928)
T ss_pred e--eeEecCCCCCCceeeEEEECCCCCEEEEEecCCceEEEeeCC-------EEEEEEEEEccCCCCCCceEECCCCCCE
Confidence 0 001111 12345678899999885555455555999965431 112222222 223345569999865544
Q ss_pred EEEecCCCeEEEEee
Q 018675 334 LASASDDGMIKIWEL 348 (352)
Q Consensus 334 l~s~~~Dg~i~iw~~ 348 (352)
|.....+|.+..+++
T Consensus 364 L~v~t~~g~~~~~~~ 378 (928)
T PF04762_consen 364 LHVLTSNGQYEIYDF 378 (928)
T ss_pred EEEEecCCcEEEEEE
Confidence 555665577666554
No 267
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.88 E-value=1e-08 Score=59.36 Aligned_cols=38 Identities=37% Similarity=0.817 Sum_probs=35.1
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEe
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE 55 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~ 55 (352)
+++.++++|.+.|++++|+|+ +.+|+|++.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~------~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPD------GNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETT------SSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecc------cccceeeCCCCEEEEEC
Confidence 567899999999999999997 47999999999999997
No 268
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.88 E-value=6.8e-08 Score=82.19 Aligned_cols=156 Identities=19% Similarity=0.174 Sum_probs=103.8
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCc--eeeeEeeccccCCeeEEEECCC---CcEEEEeeCCCcEEEEecCCCC
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGD--YECVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~--~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
...+..+++++++|.+..+....+++..... .+++.... -...-+++.|..+ ......+++...+.+|....+
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~- 142 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG- 142 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeeccccc-
Confidence 3445678888999988888877677654432 22222221 1223334444333 333334455556666655432
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
+.....||-.-+..++++||+++++++..|..|++-+..... .+.....||+..|..++.-++ +.|+|
T Consensus 143 ---~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f--------~IesfclGH~eFVS~isl~~~-~~LlS 210 (390)
T KOG3914|consen 143 ---RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF--------VIESFCLGHKEFVSTISLTDN-YLLLS 210 (390)
T ss_pred ---CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCccc--------chhhhccccHhheeeeeeccC-ceeee
Confidence 234567899999999999999999999999999987544321 223344589999999998765 45899
Q ss_pred EeCCCcEEEEcCCcc
Q 018675 232 CSDDLTIKIWGADIT 246 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~ 246 (352)
+|.|++|++||....
T Consensus 211 ~sGD~tlr~Wd~~sg 225 (390)
T KOG3914|consen 211 GSGDKTLRLWDITSG 225 (390)
T ss_pred cCCCCcEEEEecccC
Confidence 999999999998643
No 269
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=98.87 E-value=8e-08 Score=87.53 Aligned_cols=243 Identities=14% Similarity=0.232 Sum_probs=148.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCc-------------eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCc
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-------------YECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~-------------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~ 141 (352)
....+++|+....++|.|+.||.+++....+.. ...-+++.||++.|..+.|+.+.+.|-|...+|-
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl 94 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL 94 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence 457899999999999999999999998653321 1112567899999999999998888999999999
Q ss_pred EEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEE
Q 018675 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 221 (352)
Q Consensus 142 v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~ 221 (352)
|.||-+-.+.-.+. ..-....+-|.+++|..+|..+.....||.|.+=.+... +.|. +.+. + .....+.
T Consensus 95 IiVWmlykgsW~EE-MiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN--RIwg--KeLk----g--~~l~hv~ 163 (1189)
T KOG2041|consen 95 IIVWMLYKGSWCEE-MINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN--RIWG--KELK----G--QLLAHVL 163 (1189)
T ss_pred EEEEeeecccHHHH-HhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc--eecc--hhcc----h--hecccee
Confidence 99999865542221 111123345778999999988888888888766433221 1111 1121 1 1233578
Q ss_pred EcCCCCEEEEEeCCCcEEEEcCCccccccCCCCcc-ceeeEEeecccCcceEEEEecC--------C-ceEEecCCCCeE
Q 018675 222 FNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS-WRHLCTISGYHDRTIFSVHWSR--------E-GIIASGAADDSV 291 (352)
Q Consensus 222 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~--------~-~~~~s~~~d~~v 291 (352)
|++|.+.++-+-..|...++|.... +........ ......++ .....+-.++|.. + ..++.+-.+|.+
T Consensus 164 ws~D~~~~Lf~~ange~hlydnqgn-F~~Kl~~~c~Vn~tg~~s-~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~ 241 (1189)
T KOG2041|consen 164 WSEDLEQALFKKANGETHLYDNQGN-FERKLEKDCEVNGTGIFS-NFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRM 241 (1189)
T ss_pred ecccHHHHHhhhcCCcEEEeccccc-HHHhhhhceEEeeeeeec-CCCccccceeeccCccccCCCCCCEEEEEEcCcee
Confidence 9999988888888999999985421 100000000 00001111 1111233333332 2 256666666666
Q ss_pred EEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCC
Q 018675 292 QFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG 341 (352)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg 341 (352)
++.-... .+ .......+ ..|..+.|+|+|. +||.+|.|.
T Consensus 242 QiMR~eN-----D~---~Pvv~dtg--m~~vgakWnh~G~-vLAvcG~~~ 280 (1189)
T KOG2041|consen 242 QIMRSEN-----DP---EPVVVDTG--MKIVGAKWNHNGA-VLAVCGNDS 280 (1189)
T ss_pred hhhhhcC-----CC---CCeEEecc--cEeecceecCCCc-EEEEccCcc
Confidence 6542111 11 11111222 6789999999986 778888663
No 270
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.86 E-value=1.6e-06 Score=79.03 Aligned_cols=203 Identities=15% Similarity=0.093 Sum_probs=107.3
Q ss_pred ccceEEEEEccCCCCCCCcc-EEEEeeCCCeEEEE--ecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC-CC
Q 018675 21 TDRVWSLAWKPTAGVDGVAP-VFASCSGDKTVRIW--EQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF-DA 96 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~-~l~s~s~D~~v~~w--~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d~ 96 (352)
...+.+-.|+|+.. .. ++++...++.-.|| ++.++.. .... . ..+.....+|||||+.|+..+. ++
T Consensus 184 ~~~~~sP~wSPDG~----~~~~~y~S~~~g~~~I~~~~l~~g~~----~~lt-~-~~g~~~~p~wSPDG~~Laf~s~~~g 253 (428)
T PRK01029 184 HSLSITPTWMHIGS----GFPYLYVSYKLGVPKIFLGSLENPAG----KKIL-A-LQGNQLMPTFSPRKKLLAFISDRYG 253 (428)
T ss_pred CCCcccceEccCCC----ceEEEEEEccCCCceEEEEECCCCCc----eEee-c-CCCCccceEECCCCCEEEEEECCCC
Confidence 34456678999731 11 22344445554455 6654432 1111 1 2334456789999998886553 23
Q ss_pred ----cEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCcEEEEee-CCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 97 ----TTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 97 ----~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
.+.+|+...+. .........+.+.....+|+|+|+.|+..+ .++...+|.+...........+..+...+....
T Consensus 254 ~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~ 333 (428)
T PRK01029 254 NPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPA 333 (428)
T ss_pred CcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCcccee
Confidence 23335544321 111122222223446789999999877655 466666665421110011222333334566789
Q ss_pred EcCCCCEEEEEeCC---CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCC--CcEEEEcC
Q 018675 171 WHPTMDVLFSCSYD---NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDD--LTIKIWGA 243 (352)
Q Consensus 171 ~~~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~d--g~i~iwd~ 243 (352)
|+|+++.++..+.+ ..|.+|++..... ..+.. ....+....|+|+|+.|+-. ..+ ..|.++++
T Consensus 334 wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~------~~Lt~----~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 334 WSPDGKKIAFCSVIKGVRQICVYDLATGRD------YQLTT----SPENKESPSWAIDSLHLVYSAGNSNESELYLISL 402 (428)
T ss_pred ECCCCCEEEEEEcCCCCcEEEEEECCCCCe------EEccC----CCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 99999988766543 3578887654321 11211 11235568899999987743 333 34555554
No 271
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.83 E-value=2e-06 Score=79.03 Aligned_cols=188 Identities=15% Similarity=0.167 Sum_probs=103.9
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeC-CC--eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE-EeCC
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSG-DK--TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT-ASFD 95 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~-D~--~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~~~d 95 (352)
+...+.+..|+|+ ++.++-.+. ++ .|.+|++.+++. .... . ........+|+|||+.|+. .+.+
T Consensus 216 ~~~~~~~p~wSPD------G~~La~~s~~~g~~~L~~~dl~tg~~----~~lt-~-~~g~~~~~~wSPDG~~La~~~~~~ 283 (448)
T PRK04792 216 SPEPLMSPAWSPD------GRKLAYVSFENRKAEIFVQDIYTQVR----EKVT-S-FPGINGAPRFSPDGKKLALVLSKD 283 (448)
T ss_pred CCCcccCceECCC------CCEEEEEEecCCCcEEEEEECCCCCe----EEec-C-CCCCcCCeeECCCCCEEEEEEeCC
Confidence 3456678899997 456665543 33 466667765532 1111 1 1223456799999998764 4556
Q ss_pred Cc--EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CCc--EEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 96 AT--TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DKS--VWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 96 ~~--i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~--v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+. |.+++..+++.. .+..+........|+|+++.|+..+. ++. |.++|+..+.. ..+ ...++ ......
T Consensus 284 g~~~Iy~~dl~tg~~~---~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~-~~L-t~~g~--~~~~~~ 356 (448)
T PRK04792 284 GQPEIYVVDIATKALT---RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV-SRL-TFEGE--QNLGGS 356 (448)
T ss_pred CCeEEEEEECCCCCeE---ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEE-ecCCC--CCcCee
Confidence 65 555566555432 33344455677899999998765543 444 55556544432 211 12222 234568
Q ss_pred EcCCCCEEEEEeC-CCcEEEE--ecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCc
Q 018675 171 WHPTMDVLFSCSY-DNTIKVW--WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLT 237 (352)
Q Consensus 171 ~~~~~~~l~s~~~-d~~i~iw--~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~ 237 (352)
|+|+++.++..+. ++...|| ++.... . ..+... . ......|+|+|+.|+..+ .+|.
T Consensus 357 ~SpDG~~l~~~~~~~g~~~I~~~dl~~g~---~---~~lt~~--~---~d~~ps~spdG~~I~~~~~~~g~ 416 (448)
T PRK04792 357 ITPDGRSMIMVNRTNGKFNIARQDLETGA---M---QVLTST--R---LDESPSVAPNGTMVIYSTTYQGK 416 (448)
T ss_pred ECCCCCEEEEEEecCCceEEEEEECCCCC---e---EEccCC--C---CCCCceECCCCCEEEEEEecCCc
Confidence 9999998776554 4444554 433221 1 111111 0 111347999999877554 4444
No 272
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.81 E-value=1.9e-07 Score=79.47 Aligned_cols=156 Identities=15% Similarity=0.211 Sum_probs=92.5
Q ss_pred eEEEECCCCcEEEEeeCCCcEEEEecCCCCe-eEEEEEeecCccCeeEEEEcCCCCEEEEE---eCCCcEEEEecCCCCC
Q 018675 122 KSVSWNASGTLLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPTMDVLFSC---SYDNTIKVWWAEDTDS 197 (352)
Q Consensus 122 ~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~---~~d~~i~iw~~~~~~~ 197 (352)
..+..++++.+++.+..+....+++...... .+.+.... -...-+.+.+-.+...+..+ +....+.+|....
T Consensus 66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~--- 141 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS--- 141 (390)
T ss_pred cccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccc---
Confidence 3444567777777776666665666543332 12221111 11122334443333333333 3334445553221
Q ss_pred CCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEec
Q 018675 198 DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS 277 (352)
Q Consensus 198 ~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 277 (352)
+.+. ...||.+-+..|+++||+++++++..|..||+--..- .+
T Consensus 142 --~~~~-----~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa-------------------------~f----- 184 (390)
T KOG3914|consen 142 --GRCE-----PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPA-------------------------TF----- 184 (390)
T ss_pred --cCcc-----hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCc-------------------------cc-----
Confidence 1111 2238999999999999999999999999998763210 00
Q ss_pred CCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 278 REGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 278 ~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.+-.-..||...|..++.-++ +.|+|+|.|++|++||+.++
T Consensus 185 -------------------------------~IesfclGH~eFVS~isl~~~--~~LlS~sGD~tlr~Wd~~sg 225 (390)
T KOG3914|consen 185 -------------------------------VIESFCLGHKEFVSTISLTDN--YLLLSGSGDKTLRLWDITSG 225 (390)
T ss_pred -------------------------------chhhhccccHhheeeeeeccC--ceeeecCCCCcEEEEecccC
Confidence 000113478888999999875 35789999999999998764
No 273
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.79 E-value=8.4e-05 Score=65.09 Aligned_cols=267 Identities=10% Similarity=0.005 Sum_probs=132.1
Q ss_pred CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC----------CCcEEEEEccCCceeeeEeecc--
Q 018675 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF----------DATTCIWEDVGGDYECVATLEG-- 116 (352)
Q Consensus 49 ~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----------d~~i~i~~~~~~~~~~~~~~~~-- 116 (352)
++|.+.|..+.+.... +.... .+ ..+ ++|||+.|.++.. +..|.+||..+.+. +..+.-
T Consensus 27 ~~v~ViD~~~~~v~g~----i~~G~-~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~--~~~i~~p~ 97 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGM----TDGGF-LP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLP--IADIELPE 97 (352)
T ss_pred ceEEEEECCCCEEEEE----EEccC-CC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcE--EeEEccCC
Confidence 7899999877543222 21111 11 223 8999998776655 68899999877643 333321
Q ss_pred --c---cCCeeEEEECCCCcEEEEee--CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEE
Q 018675 117 --H---ENEVKSVSWNASGTLLATCG--RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKV 189 (352)
Q Consensus 117 --h---~~~v~~v~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~i 189 (352)
+ ......+.++|+|++|+... .+..|.+.|+...+....+.. .....-...+++..+ ..+.|+....
T Consensus 98 ~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v----p~~~~vy~t~e~~~~--~~~~Dg~~~~ 171 (352)
T TIGR02658 98 GPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV----PDCYHIFPTANDTFF--MHCRDGSLAK 171 (352)
T ss_pred CchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC----CCCcEEEEecCCccE--EEeecCceEE
Confidence 0 11233788899999888665 378999999876654333222 011111111111111 2223444433
Q ss_pred EecCCCCCCCceeEeeeec--c--CCCCcccEEEEEEcC-CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEe-
Q 018675 190 WWAEDTDSDNWHCVQTISE--S--NNGHSSTIWALSFNA-KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTI- 263 (352)
Q Consensus 190 w~~~~~~~~~~~~~~~~~~--~--~~~h~~~i~~l~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~- 263 (352)
..+..... . ...+... . ......+ .|.+ +|.++..... |+|.+.|+........ ..|.....-
T Consensus 172 v~~d~~g~-~--~~~~~~vf~~~~~~v~~rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~---~~~~~~~~~~ 240 (352)
T TIGR02658 172 VGYGTKGN-P--KIKPTEVFHPEDEYLINHP----AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFL---PAIEAFTEAE 240 (352)
T ss_pred EEecCCCc-e--EEeeeeeecCCccccccCC----ceEcCCCcEEEEecC-CeEEEEecCCCcceec---ceeeeccccc
Confidence 32222111 0 0111100 0 0000112 3345 7777766665 9999998532111100 001000000
Q ss_pred --ecccCcceEEEEecCCc-e-EE-ecCC--------CCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCC
Q 018675 264 --SGYHDRTIFSVHWSREG-I-IA-SGAA--------DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 264 --~~~~~~~i~~~~~~~~~-~-~~-s~~~--------d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~ 330 (352)
.++.......+++++++ . ++ +-.. .+.+.+++... .+.+.....+ ..+..++++||+
T Consensus 241 ~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t--------~kvi~~i~vG--~~~~~iavS~Dg 310 (352)
T TIGR02658 241 KADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKT--------GKRLRKIELG--HEIDSINVSQDA 310 (352)
T ss_pred cccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCC--------CeEEEEEeCC--CceeeEEECCCC
Confidence 01111122235666543 2 22 2111 13455554322 1222222223 478999999999
Q ss_pred c-ceEEEecCCCeEEEEeeccC
Q 018675 331 R-RLLASASDDGMIKIWELANT 351 (352)
Q Consensus 331 ~-~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+ .++++...++.|.|.|+...
T Consensus 311 kp~lyvtn~~s~~VsViD~~t~ 332 (352)
T TIGR02658 311 KPLLYALSTGDKTLYIFDAETG 332 (352)
T ss_pred CeEEEEeCCCCCcEEEEECcCC
Confidence 8 77777778999999998653
No 274
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.79 E-value=2.4e-05 Score=78.84 Aligned_cols=211 Identities=14% Similarity=0.107 Sum_probs=117.8
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeee---------ecceecceEEEEECCCCCEEEEE-eCC
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL---------EEMHTRTVRSCAWSPSGKLLATA-SFD 95 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~---------~~~h~~~v~~~~~s~~~~~l~s~-~~d 95 (352)
.+++.+.. +.++++-+..+.|++|+...... ......- ....-.....+++++++..|.++ ...
T Consensus 572 gvavd~~~-----g~lyVaDs~n~rI~v~d~~G~~i-~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n 645 (1057)
T PLN02919 572 KLAIDLLN-----NRLFISDSNHNRIVVTDLDGNFI-VQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTEN 645 (1057)
T ss_pred eEEEECCC-----CeEEEEECCCCeEEEEeCCCCEE-EEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCC
Confidence 45555532 35777777889999998764321 1111000 00011234778899988765544 445
Q ss_pred CcEEEEEccCCceeeeEee-------ccc-------cCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEE---
Q 018675 96 ATTCIWEDVGGDYECVATL-------EGH-------ENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVS--- 157 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~-------~~h-------~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--- 157 (352)
+.|+.+|..++....+..- .+- -...+.++++| ++.++++.+.++.|++||...+... ...
T Consensus 646 ~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G 724 (1057)
T PLN02919 646 HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDG 724 (1057)
T ss_pred ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCC
Confidence 6788887655432211110 000 11345789999 5667778888899999997543211 000
Q ss_pred ---EeecC------ccCeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeE---------eeeecc----CCCCc
Q 018675 158 ---VLQGH------AQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCV---------QTISES----NNGHS 214 (352)
Q Consensus 158 ---~~~~h------~~~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~---------~~~~~~----~~~h~ 214 (352)
...++ -.....++++|++. ++++-+.++.|++|+....... .... ..+... ....-
T Consensus 725 ~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~-~~~gg~~~~~~~l~~fG~~dG~g~~~~l 803 (1057)
T PLN02919 725 YERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSR-LLAGGDPTFSDNLFKFGDHDGVGSEVLL 803 (1057)
T ss_pred ccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEE-EEEecccccCcccccccCCCCchhhhhc
Confidence 00000 12345688999987 4556667789999986542110 0000 000000 00011
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 215 STIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.....++++++|..+++-..+++|++||.+
T Consensus 804 ~~P~Gvavd~dG~LYVADs~N~rIrviD~~ 833 (1057)
T PLN02919 804 QHPLGVLCAKDGQIYVADSYNHKIKKLDPA 833 (1057)
T ss_pred cCCceeeEeCCCcEEEEECCCCEEEEEECC
Confidence 223578899999988888889999999864
No 275
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.78 E-value=3.4e-08 Score=57.18 Aligned_cols=38 Identities=32% Similarity=0.897 Sum_probs=35.5
Q ss_pred eeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEe
Q 018675 109 ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146 (352)
Q Consensus 109 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd 146 (352)
+++.++.+|.+.|++++|+|++.+|++++.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 45678899999999999999999999999999999997
No 276
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.78 E-value=1.2e-07 Score=81.85 Aligned_cols=214 Identities=14% Similarity=0.108 Sum_probs=137.8
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeee--ecceecceEEEEECCCCCEEEEEeC-CC
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL--EEMHTRTVRSCAWSPSGKLLATASF-DA 96 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~-d~ 96 (352)
|.+.|+-+.... .++++++|-||.++.|....-.. ...+ ...|...|.+++.+-+|..+.|++. |.
T Consensus 8 hrd~i~hv~~tk-------a~fiiqASlDGh~KFWkKs~isG----vEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dh 76 (558)
T KOG0882|consen 8 HRDVITHVFPTK-------AKFIIQASLDGHKKFWKKSRISG----VEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDH 76 (558)
T ss_pred ccceeeeEeeeh-------hheEEeeecchhhhhcCCCCccc----eeehhhhHHHHHHHHhhhccccceeEeeccCccc
Confidence 788888665444 37999999999999997654111 1111 1346778889999999999999777 99
Q ss_pred cEEEEEccCCceeeeEeeccccCCeeEEEECCCC---cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASG---TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 97 ~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~---~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.++++|..+-+......+.--.+.+..+ .++.. ...++.-.++.+.++|-.... .+....-.-|..+|.++.+.|
T Consensus 77 s~KvfDvEn~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~-~q~~~fkklH~sPV~~i~y~q 154 (558)
T KOG0882|consen 77 SVKVFDVENFDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDF-CQDGYFKKLHFSPVKKIRYNQ 154 (558)
T ss_pred ceeEEEeeccchhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCc-CccceecccccCceEEEEeec
Confidence 9999997654432122222222222222 12221 233444567899999854322 122222345889999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCC-----CCCCceeE-eeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDT-----DSDNWHCV-QTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~-----~~~~~~~~-~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
.+..+++....|.|..|..... ....|..- .+..-..........++.|+|++..+.+-+.|..|+++.++..
T Consensus 155 a~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtG 233 (558)
T KOG0882|consen 155 AGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTG 233 (558)
T ss_pred cccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccc
Confidence 9999999999999999966531 00111100 0000001112345678999999999999999999999987643
No 277
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.77 E-value=3.3e-05 Score=63.62 Aligned_cols=203 Identities=14% Similarity=0.215 Sum_probs=120.6
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecc--
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG-- 116 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~-- 116 (352)
|++||. -+|..|.|-...+...-...+..+.+...-.=+-++||||+.+||.+...|+|+++|..+... ..+..
T Consensus 9 Gk~lAi-~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l---f~I~p~~ 84 (282)
T PF15492_consen 9 GKLLAI-LQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL---FVIPPAM 84 (282)
T ss_pred CcEEEE-EeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccccee---EEcCccc
Confidence 455555 478888877654432211111122222222346789999999999999999999999765432 12111
Q ss_pred -----ccCCeeEEEECCC------CcEEEEeeCCCcEEEEecCC--CCeeEEEEEee---cCccCeeEEEEcCCCCEEEE
Q 018675 117 -----HENEVKSVSWNAS------GTLLATCGRDKSVWIWEVMP--GNEFECVSVLQ---GHAQDVKMVQWHPTMDVLFS 180 (352)
Q Consensus 117 -----h~~~v~~v~~~~~------~~~l~s~~~d~~v~vwd~~~--~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s 180 (352)
-..+|..+.|-+- ...|+.-..+|.++-+-+.. .+.+...+.+. .+...|.++.++|..++|+.
T Consensus 85 ~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlV 164 (282)
T PF15492_consen 85 SFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLV 164 (282)
T ss_pred ccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEE
Confidence 1245666666331 22466667777777666532 22333333332 24568999999999888877
Q ss_pred EeCC-C----------cEEEEecCCCCC---------CCc------eeEeeee-----ccCCCCcccEEEEEEcCCCCEE
Q 018675 181 CSYD-N----------TIKVWWAEDTDS---------DNW------HCVQTIS-----ESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 181 ~~~d-~----------~i~iw~~~~~~~---------~~~------~~~~~~~-----~~~~~h~~~i~~l~~~~~~~~l 229 (352)
|+.. . -+..|.+.+... +.. .....+. ......+..|..|..||||..|
T Consensus 165 gG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~L 244 (282)
T PF15492_consen 165 GGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLL 244 (282)
T ss_pred eccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEE
Confidence 6532 1 345564432110 000 0000010 0112246789999999999999
Q ss_pred EEEeCCCcEEEEcCCc
Q 018675 230 VSCSDDLTIKIWGADI 245 (352)
Q Consensus 230 ~s~~~dg~i~iwd~~~ 245 (352)
|+...+|.|.+|++..
T Consensus 245 a~ih~sG~lsLW~iPs 260 (282)
T PF15492_consen 245 ACIHFSGSLSLWEIPS 260 (282)
T ss_pred EEEEcCCeEEEEecCc
Confidence 9999999999998753
No 278
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.73 E-value=2.1e-07 Score=76.85 Aligned_cols=249 Identities=18% Similarity=0.293 Sum_probs=137.5
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCc---eeeeEeecccc------------CCeeEEEECCCC--cEEEEe
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD---YECVATLEGHE------------NEVKSVSWNASG--TLLATC 136 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~---~~~~~~~~~h~------------~~v~~v~~~~~~--~~l~s~ 136 (352)
...|+++.|...|.+|++|...|.+.+|...... ......+++|. ..|..+.|..++ ..++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 3578999999999999999988999998654322 22223344553 357888886543 357778
Q ss_pred eCCCcEEEEecCCCCeeEEEEEeecCccCeeE----EEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeeccCC
Q 018675 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM----VQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNN 211 (352)
Q Consensus 137 ~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~----~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 211 (352)
+.|++|++|.+.... .+.+..-. -+..+.. .-.++..-.+--.+ .|..|... .-....+
T Consensus 106 tNdktiKlWKiyekn-lk~va~nn-ls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~--------------p~rvyaN 169 (460)
T COG5170 106 TNDKTIKLWKIYEKN-LKVVAENN-LSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAK--------------PCRVYAN 169 (460)
T ss_pred cCCceeeeeeeeccc-chhhhccc-cccccccccCCCcCCHHHhhcccccccceEEEec--------------cceeccc
Confidence 899999999985432 11111000 0000000 00000000000001 11111111 1111335
Q ss_pred CCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecc----cCcceEEEEecCC--ceEEec
Q 018675 212 GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY----HDRTIFSVHWSRE--GIIASG 285 (352)
Q Consensus 212 ~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~--~~~~s~ 285 (352)
+|..-|+++.|+.|.+.++++ .|=+|.+|.++...... .+..+.+. ....|.+..++|. ..++-.
T Consensus 170 aH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sF--------nIVDiKP~nmeeLteVItSaeFhp~~cn~fmYS 240 (460)
T COG5170 170 AHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSF--------NIVDIKPHNMEELTEVITSAEFHPEMCNVFMYS 240 (460)
T ss_pred cceeEeeeeeecCchheeeec-cceeeeeccccccCCce--------EEEeccCccHHHHHHHHhhcccCHhHcceEEEe
Confidence 789999999999999888876 46789999875432110 01111111 1223555666664 356677
Q ss_pred CCCCeEEEEEccCCccccCcccceeee-c------ccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 286 AADDSVQFFVESKDDLIDGPSYKMLLK-K------EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 286 ~~d~~v~~~~~~~~~~~~~~~~~~~~~-~------~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
++.|.|++.+.....+.+.+..-...+ . ..+-...|.++.|+|.|+ ++++-. =-+++|||+.
T Consensus 241 sSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngr-yIlsRd-yltvkiwDvn 309 (460)
T COG5170 241 SSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGR-YILSRD-YLTVKIWDVN 309 (460)
T ss_pred cCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCc-EEEEec-cceEEEEecc
Confidence 788899988665433333222110000 0 012235788999999987 454444 3589999985
No 279
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=98.69 E-value=4.4e-05 Score=68.17 Aligned_cols=280 Identities=13% Similarity=0.225 Sum_probs=154.1
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE-----eC---
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA-----SF--- 94 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-----~~--- 94 (352)
..+..++++. +.+ +..+.++.++|++.......++. ....++++.|+|-|.+|.+= -.
T Consensus 36 ~~~v~~~S~~------G~l-fA~~~~~~v~i~~~~~~~~~lt~-------~~~~~~~L~fSP~g~yL~T~e~~~i~~~~~ 101 (566)
T KOG2315|consen 36 PCNVFAYSNN------GRL-FAYSDNQVVKVFEIATLKVVLCV-------ELKKTYDLLFSPKGNYLLTWEPWAIYGPKN 101 (566)
T ss_pred cceeEEEcCC------CcE-EEEEcCCeEEEEEccCCcEEEEe-------ccceeeeeeecccccccccccccccccCCC
Confidence 3445566664 344 44567889999988765422221 12268899999999888752 11
Q ss_pred --CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 95 --DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 95 --d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
...+.+|+..++ .....++.....-++..|+.|..+.+-- -.+.+.+|++...+ ...+.+ |...++.+.++
T Consensus 102 ~~~pn~~v~~vet~--~~~s~~q~k~Q~~W~~qfs~dEsl~arl-v~nev~f~~~~~f~--~~~~kl--~~~~i~~f~lS 174 (566)
T KOG2315|consen 102 ASNPNVLVYNVETG--VQRSQIQKKMQNGWVPQFSIDESLAARL-VSNEVQFYDLGSFK--TIQHKL--SVSGITMLSLS 174 (566)
T ss_pred CCCCceeeeeeccc--eehhheehhhhcCcccccccchhhhhhh-hcceEEEEecCCcc--ceeeee--eccceeeEEec
Confidence 234668887662 2233333222233788898876543221 22568899875432 222333 56678888888
Q ss_pred CCC--CEEEE-----EeCCCcEEEEecCCCCCC----------------Cce-------e------------------Ee
Q 018675 173 PTM--DVLFS-----CSYDNTIKVWWAEDTDSD----------------NWH-------C------------------VQ 204 (352)
Q Consensus 173 ~~~--~~l~s-----~~~d~~i~iw~~~~~~~~----------------~~~-------~------------------~~ 204 (352)
|.. ..+++ .+.=+.++||........ .|. + ++
T Consensus 175 pgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Ly 254 (566)
T KOG2315|consen 175 PGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLY 254 (566)
T ss_pred CCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEE
Confidence 863 23332 234457888854411000 000 0 00
Q ss_pred eeecc------CCCCcccEEEEEEcCCCCEEEEEe--CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEe
Q 018675 205 TISES------NNGHSSTIWALSFNAKGDKLVSCS--DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHW 276 (352)
Q Consensus 205 ~~~~~------~~~h~~~i~~l~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 276 (352)
-+... .-.-.++|.++.|+|+++.++.+- .=..+.|||++-.-. . ..-+++=..+-|
T Consensus 255 ll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v------------~---df~egpRN~~~f 319 (566)
T KOG2315|consen 255 LLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPV------------F---DFPEGPRNTAFF 319 (566)
T ss_pred EEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEe------------E---eCCCCCccceEE
Confidence 00000 001257899999999998777653 345788898753211 0 111223334556
Q ss_pred cCCc-eE-EecCC--CCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecC-----CCeEEEEe
Q 018675 277 SREG-II-ASGAA--DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD-----DGMIKIWE 347 (352)
Q Consensus 277 ~~~~-~~-~s~~~--d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~-----Dg~i~iw~ 347 (352)
+|.+ ++ ++|-. .|.+.+|+.... .++..... ..-+-++|+|||+.++.+... |+.++||.
T Consensus 320 np~g~ii~lAGFGNL~G~mEvwDv~n~---------K~i~~~~a--~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwh 388 (566)
T KOG2315|consen 320 NPHGNIILLAGFGNLPGDMEVWDVPNR---------KLIAKFKA--ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWH 388 (566)
T ss_pred CCCCCEEEEeecCCCCCceEEEeccch---------hhcccccc--CCceEEEEcCCCcEEEEEeccccEEecCCeEEEE
Confidence 7755 33 33333 478999976431 12222222 235668899999865543333 78899998
Q ss_pred ec
Q 018675 348 LA 349 (352)
Q Consensus 348 ~~ 349 (352)
..
T Consensus 389 yt 390 (566)
T KOG2315|consen 389 YT 390 (566)
T ss_pred ec
Confidence 74
No 280
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=98.67 E-value=1.4e-05 Score=71.29 Aligned_cols=197 Identities=17% Similarity=0.320 Sum_probs=119.0
Q ss_pred CccceEEEEEccCCCCCCCccEEEEe-----eCCCeEEEEecCCCce--eeeeeeeeecceecceEEEEECCCCCEE-E-
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASC-----SGDKTVRIWEQSASSR--FWNCKAVLEEMHTRTVRSCAWSPSGKLL-A- 90 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~-----s~D~~v~~w~~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~- 90 (352)
|...|+...++|.. ...++|+- |.=..||||....... ....+..++ .+. ....|++-|+-| +
T Consensus 164 ~~~~i~~f~lSpgp----~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFk---adk-vqm~WN~~gt~LLvL 235 (566)
T KOG2315|consen 164 SVSGITMLSLSPGP----EPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFK---ADK-VQMKWNKLGTALLVL 235 (566)
T ss_pred eccceeeEEecCCC----CCceEEEEccCCCCCCcEEEEeccccccccchhhhccccc---cce-eEEEeccCCceEEEE
Confidence 77889999999862 13455543 4446899998652211 111112221 122 345678766532 2
Q ss_pred -EEeCCC---------cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee--CCCcEEEEecCCCCeeEEEEE
Q 018675 91 -TASFDA---------TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG--RDKSVWIWEVMPGNEFECVSV 158 (352)
Q Consensus 91 -s~~~d~---------~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~ 158 (352)
+..-|. ++.+.... +. .+...+. ..++|.++.|+|++..|+.+- .=-++.++|++- . ++..
T Consensus 236 astdVDktn~SYYGEq~Lyll~t~-g~-s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~---~v~d 308 (566)
T KOG2315|consen 236 ASTDVDKTNASYYGEQTLYLLATQ-GE-SVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-K---PVFD 308 (566)
T ss_pred EEEeecCCCccccccceEEEEEec-Cc-eEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCC-C---EeEe
Confidence 232333 34444333 22 2232332 368999999999998776654 335788898752 2 2332
Q ss_pred eecCccCeeEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC-
Q 018675 159 LQGHAQDVKMVQWHPTMDVLFSCSYD---NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD- 234 (352)
Q Consensus 159 ~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~- 234 (352)
+ -..+=+++-|+|.+++++.++.+ |.+.+||+.+. +++..+. . ..-.-..|+|||++++|++.
T Consensus 309 f--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~-----K~i~~~~----a--~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 309 F--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR-----KLIAKFK----A--ANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred C--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccch-----hhccccc----c--CCceEEEEcCCCcEEEEEecc
Confidence 2 23455678899999999888875 68999987652 2333222 1 22334789999999998875
Q ss_pred -----CCcEEEEcCC
Q 018675 235 -----DLTIKIWGAD 244 (352)
Q Consensus 235 -----dg~i~iwd~~ 244 (352)
|+-++||+..
T Consensus 376 PRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 376 PRLRVDNGIKIWHYT 390 (566)
T ss_pred ccEEecCCeEEEEec
Confidence 6889999754
No 281
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.63 E-value=2.1e-07 Score=77.89 Aligned_cols=168 Identities=14% Similarity=0.145 Sum_probs=114.1
Q ss_pred EEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCC---ceeeeEeeccccC
Q 018675 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG---DYECVATLEGHEN 119 (352)
Q Consensus 43 ~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~---~~~~~~~~~~h~~ 119 (352)
++.|.+..+-+=+.+++-. +- ..-...|.++.|...++++..|.-+|.|..+|.... ...+...+ -|.+
T Consensus 228 fs~G~sqqv~L~nvetg~~-----qs--f~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~S 299 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-----QS--FQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDS 299 (425)
T ss_pred ecccccceeEEEEeecccc-----cc--cccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCc
Confidence 5556677777777766521 11 113457888899988999999999999999997542 22334444 4889
Q ss_pred CeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE--EcCCCCEEEEEeCCCcEEEEecCCCC
Q 018675 120 EVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ--WHPTMDVLFSCSYDNTIKVWWAEDTD 196 (352)
Q Consensus 120 ~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~l~s~~~d~~i~iw~~~~~~ 196 (352)
.|+++..-. +++.|++.+.+|+|++||++..+-.+.+..+.+|...-.-+- ..+.+..+++++.|...+||.+...
T Consensus 300 svtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~g- 378 (425)
T KOG2695|consen 300 SVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSG- 378 (425)
T ss_pred chhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccC-
Confidence 999987755 678899999999999999865443334777888876554443 3466778899999999999965443
Q ss_pred CCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 197 SDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
+.+.++......-...+++++|.
T Consensus 379 ----hLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 379 ----HLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred ----ceeeccCCCCccccccccceehh
Confidence 22333332223333456666664
No 282
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.63 E-value=1.3e-06 Score=70.49 Aligned_cols=160 Identities=15% Similarity=0.246 Sum_probs=94.2
Q ss_pred eecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-----CCcEEEEec
Q 018675 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-----DKSVWIWEV 147 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-----d~~v~vwd~ 147 (352)
|+.+-.+-+.+--+..++++..|+.+.+++.+. ..........-...-.+.++...++.+.++.- -+..+.|++
T Consensus 88 ~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~-~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~ 166 (319)
T KOG4714|consen 88 NSEIDPNDACTMTDNRVCIGYADGSLAVFSTDK-DLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTL 166 (319)
T ss_pred cCCCCCcccccccCCceEecCCCceEEEEechH-HHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecc
Confidence 333333334444567899999999999987432 11100000000111112223334555544421 123456666
Q ss_pred CCCCeeEEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-
Q 018675 148 MPGNEFECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK- 225 (352)
Q Consensus 148 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~- 225 (352)
++.+.... ....-..+.+++-+|.. ..+++|+.||.+-+||.+.... +.....+|..+|+.+-|+|.
T Consensus 167 ~p~~t~~~---~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~--------p~S~l~ahk~~i~eV~FHpk~ 235 (319)
T KOG4714|consen 167 DPIKTLIP---SKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAM--------PVSLLKAHKAEIWEVHFHPKN 235 (319)
T ss_pred cccccccc---cccccccchhhhCCcccccEEEEecCCCeEEEEEcccccc--------hHHHHHHhhhhhhheeccCCC
Confidence 54332111 11112348888888864 4677888999999998765411 11223479999999999995
Q ss_pred CCEEEEEeCCCcEEEEcCC
Q 018675 226 GDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 226 ~~~l~s~~~dg~i~iwd~~ 244 (352)
+..|+++++||.+-.||..
T Consensus 236 p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 236 PEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred chheeEecCCCcEEEEcCC
Confidence 6789999999999999975
No 283
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.59 E-value=7.7e-07 Score=71.76 Aligned_cols=147 Identities=15% Similarity=0.187 Sum_probs=88.7
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC-----CCcEEEEEccCCceeeeEe
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF-----DATTCIWEDVGGDYECVAT 113 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-----d~~i~i~~~~~~~~~~~~~ 113 (352)
+..++++..||.+-+.+.+... .........|.+.......+ .+..+.++.. -+..++|+....+......
T Consensus 101 ~t~V~~~~~dg~~~v~s~~~~~---~~~~~i~~~~~~~as~~~~~-~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~ 176 (319)
T KOG4714|consen 101 DNRVCIGYADGSLAVFSTDKDL---ALMSRIPSIHSGSASRKICR-HGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSK 176 (319)
T ss_pred CCceEecCCCceEEEEechHHH---hhhhhcccccccccccceee-cccEEecCCcceEeeccceeeecccccccccccc
Confidence 3568999999999998765321 11111111122211111111 3344433321 1234455433221111111
Q ss_pred eccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC-CCEEEEEeCCCcEEEEe
Q 018675 114 LEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWW 191 (352)
Q Consensus 114 ~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~iw~ 191 (352)
.-...|.+++-+|..+ ++++|+.||.+.+||.+.. ..+...++.|..+++.+-|||. ...|+++++||.+-.|+
T Consensus 177 --~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~--~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wd 252 (319)
T KOG4714|consen 177 --KALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNV--AMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWD 252 (319)
T ss_pred --cccccchhhhCCcccccEEEEecCCCeEEEEEcccc--cchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEc
Confidence 1123488898888654 5777889999999998754 2345667889999999999995 56799999999999997
Q ss_pred cC
Q 018675 192 AE 193 (352)
Q Consensus 192 ~~ 193 (352)
..
T Consensus 253 as 254 (319)
T KOG4714|consen 253 AS 254 (319)
T ss_pred CC
Confidence 54
No 284
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.53 E-value=6e-07 Score=79.70 Aligned_cols=175 Identities=16% Similarity=0.326 Sum_probs=109.3
Q ss_pred eEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC----eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCc
Q 018675 111 VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN----EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT 186 (352)
Q Consensus 111 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 186 (352)
+..+.+|+..|+.+.--.+.+-+++++.|++|++|.+++.. ...|..++..|..+|..+.|-.+.+.+++ -|+.
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~g 805 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGG 805 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCc
Confidence 45667999999888665566779999999999999987542 23467788999999999999888776654 6899
Q ss_pred EEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE-EeCCCcEEEEcCCccccccCCCCccceeeEEee-
Q 018675 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS-CSDDLTIKIWGADITRMQSGDGYASWRHLCTIS- 264 (352)
Q Consensus 187 i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~- 264 (352)
|.+||.-....- .+-......+-...|.++. +-+...+++ |+...+||++|.+... |.-.-+..
T Consensus 806 iHlWDPFigr~L----aq~~dapk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce---------~~~E~kVcn 871 (1034)
T KOG4190|consen 806 IHLWDPFIGRLL----AQMEDAPKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCE---------WTCELKVCN 871 (1034)
T ss_pred ceeecccccchh----HhhhcCcccCCCceeEecc-cCcchheeeeccchhhheeeeccccc---------ceeeEEecc
Confidence 999975332110 0000011112223344432 113444444 4788999999976321 21111111
Q ss_pred -cccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCcc
Q 018675 265 -GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDL 301 (352)
Q Consensus 265 -~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~ 301 (352)
+.......+++..+.| .++++-.+|.+.+.+...+.+
T Consensus 872 a~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~v 910 (1034)
T KOG4190|consen 872 APGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKV 910 (1034)
T ss_pred CCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCce
Confidence 1122345566666654 688888888888876655433
No 285
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.53 E-value=4e-06 Score=69.44 Aligned_cols=216 Identities=18% Similarity=0.287 Sum_probs=131.3
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeee-ee--cc------------eecceEEEEECC
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV-LE--EM------------HTRTVRSCAWSP 84 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~-~~--~~------------h~~~v~~~~~s~ 84 (352)
..+.|+++.|... |.+++||...|.|-++..+... -|.+. +. .. -...|+.+.|-.
T Consensus 25 ead~ItaVefd~t------g~YlatGDkgGRVvlfer~~s~---~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~ 95 (460)
T COG5170 25 EADKITAVEFDET------GLYLATGDKGGRVVLFEREKSY---GCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFD 95 (460)
T ss_pred ccceeeEEEeccc------cceEeecCCCceEEEeeccccc---ccchhhhhhhcccccchhhhhhccHHHHhhheeeec
Confidence 4578899988765 5799998878999999754321 11110 00 00 123567777754
Q ss_pred CC--CEEEEEeCCCcEEEEEccCCcee-----------------------------------eeE------eeccccCCe
Q 018675 85 SG--KLLATASFDATTCIWEDVGGDYE-----------------------------------CVA------TLEGHENEV 121 (352)
Q Consensus 85 ~~--~~l~s~~~d~~i~i~~~~~~~~~-----------------------------------~~~------~~~~h~~~v 121 (352)
++ ..++..+.|.+|++|........ .+. .-..|.-.+
T Consensus 96 ~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhi 175 (460)
T COG5170 96 DTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHI 175 (460)
T ss_pred CCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEe
Confidence 43 35667789999999974321000 000 113567778
Q ss_pred eEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc-----cCeeEEEEcCCCCE-EEEEeCCCcEEEEecCCC
Q 018675 122 KSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA-----QDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDT 195 (352)
Q Consensus 122 ~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~-l~s~~~d~~i~iw~~~~~ 195 (352)
++++|+.+.+.++++ +|-.|.+|.+......-.+..++.|. .-|++..|+|.... +.-.+..|.|++.|++..
T Consensus 176 NSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~ 254 (460)
T COG5170 176 NSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQS 254 (460)
T ss_pred eeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhh
Confidence 899999988887765 56789999975433222233334443 23678889997654 445567899999987642
Q ss_pred CCC-CceeEe--eeec-cC---CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 196 DSD-NWHCVQ--TISE-SN---NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 196 ~~~-~~~~~~--~~~~-~~---~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
..- ....+- ++.. .. .+-...|..+.|+++|+|+++-+ --+++|||.++.
T Consensus 255 alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~ 311 (460)
T COG5170 255 ALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMA 311 (460)
T ss_pred hhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccc
Confidence 110 000000 0000 00 01235677889999999988765 368999998753
No 286
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.52 E-value=2.5e-05 Score=63.55 Aligned_cols=147 Identities=14% Similarity=0.034 Sum_probs=98.4
Q ss_pred EEEeeCCCeEEEEecCCCceeeeeeeeeecceec--ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeE-eecccc
Q 018675 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR--TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVA-TLEGHE 118 (352)
Q Consensus 42 l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~-~~~~h~ 118 (352)
+.-++.|.++++.+++.+.. +.. .|.. .++++++++|++++++.+....+-.|........... .+..-+
T Consensus 131 ~~i~sndht~k~~~~~~~s~----~~~---~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~ 203 (344)
T KOG4532|consen 131 LNIASNDHTGKTMVVSGDSN----KFA---VHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTS 203 (344)
T ss_pred eeeccCCcceeEEEEecCcc----cce---eeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccC
Confidence 55668999999998765421 111 1332 3789999999999999998888988876543222222 333334
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe-eEEE-EEeecCccCeeEEEEcCCCC--EEEEEeCCCcEEEEecCC
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE-FECV-SVLQGHAQDVKMVQWHPTMD--VLFSCSYDNTIKVWWAED 194 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~-~~~~~h~~~v~~~~~~~~~~--~l~s~~~d~~i~iw~~~~ 194 (352)
..=.+.+|+.....+|++..||++.+||++.... +..+ ..-..|...++.+.|+|-+. +|+-.-.=+.+.+.|+++
T Consensus 204 D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~ 283 (344)
T KOG4532|consen 204 DHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN 283 (344)
T ss_pred CCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence 4556889999999999999999999999975432 1111 12234778899999997543 333332345677777655
Q ss_pred C
Q 018675 195 T 195 (352)
Q Consensus 195 ~ 195 (352)
.
T Consensus 284 ~ 284 (344)
T KOG4532|consen 284 Y 284 (344)
T ss_pred C
Confidence 3
No 287
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.48 E-value=0.00014 Score=65.05 Aligned_cols=276 Identities=18% Similarity=0.295 Sum_probs=145.0
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC----------
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD---------- 95 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---------- 95 (352)
-+.|+|. |.+|+|--.- -|.+|--.+- ....+..|. .|.-+.|||..++|+|-+..
T Consensus 215 yv~wSP~------GTYL~t~Hk~-GI~lWGG~~f------~r~~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e 280 (698)
T KOG2314|consen 215 YVRWSPK------GTYLVTFHKQ-GIALWGGESF------DRIQRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNE 280 (698)
T ss_pred eEEecCC------ceEEEEEecc-ceeeecCccH------HHHHhccCC-CceeeecCCccceEEEecCCccccCcccCC
Confidence 4678886 6788887544 4668843221 122223354 58899999999999986632
Q ss_pred -CcEEEEEccCCceeeeEeeccccCCee-EEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 96 -ATTCIWEDVGGDYECVATLEGHENEVK-SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 96 -~~i~i~~~~~~~~~~~~~~~~h~~~v~-~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
..++|||..+|..............++ -+.||.+++++|--.. .+|.|++... +..+..-.-.-..|....|+|
T Consensus 281 ~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtps---f~lld~Kslki~gIr~FswsP 356 (698)
T KOG2314|consen 281 GQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPS---FMLLDKKSLKISGIRDFSWSP 356 (698)
T ss_pred CceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCc---eeeecccccCCccccCcccCC
Confidence 468999998885433222211222333 4689999999887766 5688998643 222111111235678888999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccC--------CCCcccEEEEEEcCCCCEEEEEe----------CC
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN--------NGHSSTIWALSFNAKGDKLVSCS----------DD 235 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~--------~~h~~~i~~l~~~~~~~~l~s~~----------~d 235 (352)
.+..|| .| ......... .-++.+.. +-|.-.=..|-|-.+|.||..-- .-
T Consensus 357 ~~~llA---------Yw-tpe~~~~pa--rvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f 424 (698)
T KOG2314|consen 357 TSNLLA---------YW-TPETNNIPA--RVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQF 424 (698)
T ss_pred CcceEE---------EE-cccccCCcc--eEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceE
Confidence 865443 33 222111111 00111100 11111111355667777765321 11
Q ss_pred CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc---eEEecCC-CCeEEEEEccCCccccCcccceee
Q 018675 236 LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG---IIASGAA-DDSVQFFVESKDDLIDGPSYKMLL 311 (352)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~s~~~-d~~v~~~~~~~~~~~~~~~~~~~~ 311 (352)
..+-||-++.... +... ......+..++|.|.| .+++|.. ..++.+|..... .....++
T Consensus 425 ~n~eIfrireKdI----------pve~--velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~-----~~~~~lV 487 (698)
T KOG2314|consen 425 SNLEIFRIREKDI----------PVEV--VELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETN-----IKKPSLV 487 (698)
T ss_pred eeEEEEEeeccCC----------Ccee--eecchheeeeeeccCCCeEEEEEccccccceeEEEeecC-----CCchhhh
Confidence 1233332211100 0000 1124567888999966 2444433 346788855421 1111222
Q ss_pred ecccccCcceeEEEecCCCcceEEE--ecCCCeEEEEeecc
Q 018675 312 KKEKAHDMDVNSVQWSPGERRLLAS--ASDDGMIKIWELAN 350 (352)
Q Consensus 312 ~~~~~h~~~i~~~~~sp~~~~~l~s--~~~Dg~i~iw~~~~ 350 (352)
.++.. ...+.+-|+|.|+.+++. +|..|.+..+|+..
T Consensus 488 k~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~ 526 (698)
T KOG2314|consen 488 KELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDY 526 (698)
T ss_pred hhhcc--cccceEEEcCCCcEEEEEEecccccceEEEecch
Confidence 22222 347889999999865432 23467788888753
No 288
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.45 E-value=0.00014 Score=73.47 Aligned_cols=163 Identities=13% Similarity=0.118 Sum_probs=104.7
Q ss_pred EEEEECC-CCCEEEEEeCCCcEEEEEccCCceeeeE------eeccc------cCCeeEEEECCCCc-EEEEeeCCCcEE
Q 018675 78 RSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVA------TLEGH------ENEVKSVSWNASGT-LLATCGRDKSVW 143 (352)
Q Consensus 78 ~~~~~s~-~~~~l~s~~~d~~i~i~~~~~~~~~~~~------~~~~h------~~~v~~v~~~~~~~-~l~s~~~d~~v~ 143 (352)
..++|+| ++.++++.+.++.|.+|+..++...... ...++ -...+.++++|++. ++++-+.++.|+
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Ir 765 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIR 765 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEE
Confidence 5789999 5677788888899999987654321110 00011 12356799999987 555667789999
Q ss_pred EEecCCCCeeEEEE----------Eeec--------CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEee
Q 018675 144 IWEVMPGNEFECVS----------VLQG--------HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT 205 (352)
Q Consensus 144 vwd~~~~~~~~~~~----------~~~~--------h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~ 205 (352)
+||+..+....... .+.. .-..-..+++.+++..+++-+.++.|++|+..... ..+
T Consensus 766 v~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~------v~t 839 (1057)
T PLN02919 766 ALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKR------VTT 839 (1057)
T ss_pred EEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCe------EEE
Confidence 99986543211000 0000 00123477889999988888889999999864321 111
Q ss_pred eec----------cCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 206 ISE----------SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 206 ~~~----------~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
+.. ...+.-.....|+++++|+.+++-+.+++|++||++..
T Consensus 840 iaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~ 890 (1057)
T PLN02919 840 LAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKG 890 (1057)
T ss_pred EeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 110 01122235678999999999999999999999998643
No 289
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.43 E-value=9.1e-05 Score=72.11 Aligned_cols=241 Identities=12% Similarity=0.249 Sum_probs=130.6
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 154 (352)
..|.++.|-.++..++.+..+|.|.+-|..+...+.+... ...|.+.+|+|+.+.++-...++++.+-+- .+.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~v---d~GI~aaswS~Dee~l~liT~~~tll~mT~----~f~ 141 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNV---DNGISAASWSPDEELLALITGRQTLLFMTK----DFE 141 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeec---cCceEEEeecCCCcEEEEEeCCcEEEEEec----ccc
Confidence 5789999999999999999999999988776655544443 468999999999999998888888866431 111
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeee--ccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS--ESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~--~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
++....-+.. -.+.+. .+..++.+.-.-+.-............... ... ...+.=.+++|..||+|+|+.
T Consensus 142 ~i~E~~L~~d------~~~~sk-~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~-~~~~~~~~IsWRgDg~~fAVs 213 (1265)
T KOG1920|consen 142 PIAEKPLDAD------DERKSK-FVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQI-EQDDHKTSISWRGDGEYFAVS 213 (1265)
T ss_pred chhccccccc------cccccc-cceecccccceeeecchhhhcccccccccccccch-hhccCCceEEEccCCcEEEEE
Confidence 1111000110 011111 222222221111100000000000000000 000 011222368999999999883
Q ss_pred e----CC-CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEec----CCCCeEEEEEccCCcccc
Q 018675 233 S----DD-LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASG----AADDSVQFFVESKDDLID 303 (352)
Q Consensus 233 ~----~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~----~~d~~v~~~~~~~~~~~~ 303 (352)
. .+ ..|++||-+ ..+++... .....-.+++|-|.|-+++. .+|+.|.++..++ +
T Consensus 214 ~~~~~~~~RkirV~drE-g~Lns~se------------~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNG--L-- 276 (1265)
T KOG1920|consen 214 FVESETGTRKIRVYDRE-GALNSTSE------------PVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNG--L-- 276 (1265)
T ss_pred EEeccCCceeEEEeccc-chhhcccC------------cccccccceeecCCCCeEeeeeecCCCCcEEEEecCC--c--
Confidence 2 33 799999865 22221111 11222345778887643332 4455677775432 2
Q ss_pred CcccceeeecccccCcceeEEEecCCCcceEEE---ecCCCeEEEEeecc
Q 018675 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS---ASDDGMIKIWELAN 350 (352)
Q Consensus 304 ~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s---~~~Dg~i~iw~~~~ 350 (352)
...........-..+|..++|+.++. +||. ..+...|++|-+.|
T Consensus 277 --~hg~f~l~~p~de~~ve~L~Wns~sd-iLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 277 --RHGEFVLPFPLDEKEVEELAWNSNSD-ILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred --cccccccCCcccccchheeeecCCCC-ceeeeecccccceEEEEEecC
Confidence 11122111222233499999999886 6665 55566699998765
No 290
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.41 E-value=6.6e-06 Score=71.44 Aligned_cols=213 Identities=13% Similarity=0.078 Sum_probs=132.3
Q ss_pred ccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CCcEEEEecCCC
Q 018675 117 HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDT 195 (352)
Q Consensus 117 h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~ 195 (352)
|...|+.+. ....+++.+++-||.++.|--......+.+..+.+|...+.+++.+.++-.+.+.+. |..++++++.+.
T Consensus 8 hrd~i~hv~-~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 8 HRDVITHVF-PTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred ccceeeeEe-eehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 555565543 334578999999999999985432333445556678778888888889888888777 999999998876
Q ss_pred CCCCceeEeeeeccCCCCcccEEEEEEcCCC--C-EEE-EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcce
Q 018675 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKG--D-KLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~--~-~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 271 (352)
+.-+...+.-+ . ..+..+ ...| . .++ +.-.+|.+.++|-.... .+.+.+...|.+++
T Consensus 87 DminmiKL~~l----P---g~a~wv--~skGd~~s~IAVs~~~sg~i~VvD~~~d~----------~q~~~fkklH~sPV 147 (558)
T KOG0882|consen 87 DMINMIKLVDL----P---GFAEWV--TSKGDKISLIAVSLFKSGKIFVVDGFGDF----------CQDGYFKKLHFSPV 147 (558)
T ss_pred chhhhcccccC----C---CceEEe--cCCCCeeeeEEeecccCCCcEEECCcCCc----------CccceecccccCce
Confidence 54332111111 1 111111 1122 1 233 33467889999743211 12233445577778
Q ss_pred EEEEecCCc-eEEecCCCCeEEEEEccCC------ccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEE
Q 018675 272 FSVHWSREG-IIASGAADDSVQFFVESKD------DLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 344 (352)
Q Consensus 272 ~~~~~~~~~-~~~s~~~d~~v~~~~~~~~------~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~ 344 (352)
..+...+.+ .+++....|.|..|..... .+.-......-+...........++.|+|++.+ +.+-+.|..||
T Consensus 148 ~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~q-istl~~DrkVR 226 (558)
T KOG0882|consen 148 KKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQ-ISTLNPDRKVR 226 (558)
T ss_pred EEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCc-ccccCcccEEE
Confidence 887777755 5666666789999977631 011011111111112233467889999999975 78888999999
Q ss_pred EEeecc
Q 018675 345 IWELAN 350 (352)
Q Consensus 345 iw~~~~ 350 (352)
++.+..
T Consensus 227 ~F~~Kt 232 (558)
T KOG0882|consen 227 GFVFKT 232 (558)
T ss_pred EEEecc
Confidence 998764
No 291
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.38 E-value=0.00051 Score=60.97 Aligned_cols=278 Identities=12% Similarity=0.187 Sum_probs=148.5
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeC---------------CCeEEEEecCCCceeeeeeeeeecceecceE-EEEECCC
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSG---------------DKTVRIWEQSASSRFWNCKAVLEEMHTRTVR-SCAWSPS 85 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~---------------D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~~ 85 (352)
..|..+.|+|. +++|.|=+. ++.+.+||..++.........- ...... -+.|+-+
T Consensus 72 ~~V~~~~fSP~------~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~---q~~~~Wp~~k~s~~ 142 (561)
T COG5354 72 PDVKYLDFSPN------EKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGIS---QPYLGWPVLKFSID 142 (561)
T ss_pred CCceecccCcc------cceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccC---Ccccccceeeeeec
Confidence 45677888886 456666443 3358899987764322222110 111122 4678877
Q ss_pred CCEEEEEeCCCcEEEEEccCCcee--eeEeeccccCCeeEEEECCCCc--EEEE-----eeCCCcEEEEecCCCCeeEEE
Q 018675 86 GKLLATASFDATTCIWEDVGGDYE--CVATLEGHENEVKSVSWNASGT--LLAT-----CGRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~~~~~--~l~s-----~~~d~~v~vwd~~~~~~~~~~ 156 (352)
..++|=. ....+.+++. +.... +...+. ...|...+|+|.++ .|+. .+.++++++|.+.........
T Consensus 143 D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk 218 (561)
T COG5354 143 DKYVARV-VGSSLYIHEI-TDNIEEHPFKNLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTK 218 (561)
T ss_pred chhhhhh-ccCeEEEEec-CCccccCchhhcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeee
Confidence 7766533 2356788875 33322 122222 35688899999654 3443 467789999998754433222
Q ss_pred EEeecCccCeeEEEEcCCCCEEEEEeC-----------CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 157 SVLQGHAQDVKMVQWHPTMDVLFSCSY-----------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~~~~~~l~s~~~-----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
..++. .-..+.|++.+.++..--. ...+.++.+...+ +... ....++|...+|.|.
T Consensus 219 ~lfk~---~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~---------i~V~-~~~~~pVhdf~W~p~ 285 (561)
T COG5354 219 NLFKV---SGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS---------IPVE-KDLKDPVHDFTWEPL 285 (561)
T ss_pred eeEee---cccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc---------ccee-ccccccceeeeeccc
Confidence 22221 2245788888886543211 1234444433211 1111 134678999999998
Q ss_pred CCEEEEEe--CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCC---CCeEEEEEccCC
Q 018675 226 GDKLVSCS--DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAA---DDSVQFFVESKD 299 (352)
Q Consensus 226 ~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~---d~~v~~~~~~~~ 299 (352)
++.++.++ .+-.+.++|++..-.. . ..++.-..+.|+|.. +++.++- .|.+.+|+....
T Consensus 286 S~~F~vi~g~~pa~~s~~~lr~Nl~~------------~---~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~r 350 (561)
T COG5354 286 SSRFAVISGYMPASVSVFDLRGNLRF------------Y---FPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGR 350 (561)
T ss_pred CCceeEEecccccceeecccccceEE------------e---cCCcccccccccCcccEEEEecCCccccceEEeccCCc
Confidence 87766544 6778888887532100 0 011111223344433 3333332 356777755331
Q ss_pred ccccCcccceeeecccccCcceeEEEecCCCcceEEE-ec----CCCeEEEEeecc
Q 018675 300 DLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS-AS----DDGMIKIWELAN 350 (352)
Q Consensus 300 ~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s-~~----~Dg~i~iw~~~~ 350 (352)
.++.....+ ....-+.|+||++.+... .| .|..|+||++.-
T Consensus 351 --------f~~~~~~~~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 351 --------FKVAGAFNG--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred --------eEEEEEeec--CCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence 122212222 234567899998754332 11 377899999863
No 292
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.36 E-value=0.0016 Score=57.62 Aligned_cols=142 Identities=15% Similarity=0.174 Sum_probs=100.5
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC-cEEEEEccCCceeeeEeeccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA-TTCIWEDVGGDYECVATLEGH 117 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~-~i~i~~~~~~~~~~~~~~~~h 117 (352)
+.+++..|..+ ..+.+...+ ..+.-.|...|+-..+..++.-++.|..|| .+-+++..+++ ...+.+.
T Consensus 332 Gd~ia~VSRGk-aFi~~~~~~-------~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e---~kr~e~~ 400 (668)
T COG4946 332 GDYIALVSRGK-AFIMRPWDG-------YSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE---VKRIEKD 400 (668)
T ss_pred CcEEEEEecCc-EEEECCCCC-------eeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce---EEEeeCC
Confidence 56666666543 333332211 112233566788888888888899999999 88999987764 3344556
Q ss_pred cCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC----CCcEEEEecC
Q 018675 118 ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY----DNTIKVWWAE 193 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----d~~i~iw~~~ 193 (352)
-+.|.++..+++|+.++.+.....+.+.|+..++.... -+....-|+..+|||+.++++-+=. ...|+++++.
T Consensus 401 lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~i---dkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~ 477 (668)
T COG4946 401 LGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLI---DKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMD 477 (668)
T ss_pred ccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEe---cccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecC
Confidence 67899999999999999998888999999987753221 2233456889999999998885543 4578999775
Q ss_pred C
Q 018675 194 D 194 (352)
Q Consensus 194 ~ 194 (352)
.
T Consensus 478 ~ 478 (668)
T COG4946 478 G 478 (668)
T ss_pred C
Confidence 4
No 293
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.36 E-value=0.00024 Score=63.62 Aligned_cols=282 Identities=17% Similarity=0.271 Sum_probs=148.7
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeC-----------CCeEEEEecCCCceeeeeeeeeecceecce-EEEEECCCCCEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSG-----------DKTVRIWEQSASSRFWNCKAVLEEMHTRTV-RSCAWSPSGKLLA 90 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~-----------D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v-~~~~~s~~~~~l~ 90 (352)
.|.-++|+|.. ++|+|-|. ...++|||+.++......... + ....+ .-..||.|++++|
T Consensus 251 ~Vq~idfSP~E------kYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~-~--~~~~~WP~frWS~DdKy~A 321 (698)
T KOG2314|consen 251 GVQFIDFSPNE------KYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVI-K--SPYLKWPIFRWSHDDKYFA 321 (698)
T ss_pred CceeeecCCcc------ceEEEecCCccccCcccCCCceEEEEEccccchhcceecc-C--CCccccceEEeccCCceeE
Confidence 46678899964 67888753 168999999887432111110 0 00111 2357999999998
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-----CcEEEEecCCCCeeEEEEEeecCccC
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
-... .+|.||+... ..++-.-.-.-..|..+.|+|.+++||-=... ..+.+-.++..+. ++.-.-++-.
T Consensus 322 rm~~-~sisIyEtps--f~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~---iRt~nlfnVs 395 (698)
T KOG2314|consen 322 RMTG-NSISIYETPS--FMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKRE---IRTKNLFNVS 395 (698)
T ss_pred Eecc-ceEEEEecCc--eeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccce---eeeccceeee
Confidence 7666 5688887432 22221111123578899999988776632111 1333444433322 1111111111
Q ss_pred eeEEEEcCCCCEEEEEe----------CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC-
Q 018675 166 VKMVQWHPTMDVLFSCS----------YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD- 234 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~- 234 (352)
=+.+-|..++.+|..-- .=..+.|+.+...+- ..........|...+|-|.|+.++.-+.
T Consensus 396 DckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdI---------pve~velke~vi~FaWEP~gdkF~vi~g~ 466 (698)
T KOG2314|consen 396 DCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDI---------PVEVVELKESVIAFAWEPHGDKFAVISGN 466 (698)
T ss_pred ccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCC---------CceeeecchheeeeeeccCCCeEEEEEcc
Confidence 12355667777765321 111234443332211 0000123467888999999988775432
Q ss_pred --CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCce-E---EecCCCCeEEEEEccCCccccCcccc
Q 018675 235 --DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-I---ASGAADDSVQFFVESKDDLIDGPSYK 308 (352)
Q Consensus 235 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~---~s~~~d~~v~~~~~~~~~~~~~~~~~ 308 (352)
..++.+|..+.. ...++....+ .......+.|+|.|. + +-++..|.+.+++....++...
T Consensus 467 ~~k~tvsfY~~e~~-------~~~~~lVk~~---dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~---- 532 (698)
T KOG2314|consen 467 TVKNTVSFYAVETN-------IKKPSLVKEL---DKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDT---- 532 (698)
T ss_pred ccccceeEEEeecC-------CCchhhhhhh---cccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhc----
Confidence 357888865421 1112222222 123455688999873 2 2335578888887643222111
Q ss_pred eeeecccccCcceeEEEecCCCcceEEEecC------CCeEEEEee
Q 018675 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASD------DGMIKIWEL 348 (352)
Q Consensus 309 ~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~------Dg~i~iw~~ 348 (352)
-...|. ..+.+.|.|.|++ ++|++. |.--+||++
T Consensus 533 ----~~~eh~-~at~veWDPtGRY-vvT~ss~wrhk~d~GYri~tf 572 (698)
T KOG2314|consen 533 ----ASPEHF-AATEVEWDPTGRY-VVTSSSSWRHKVDNGYRIFTF 572 (698)
T ss_pred ----cCcccc-ccccceECCCCCE-EEEeeehhhhccccceEEEEe
Confidence 112342 4678899999974 666664 333455654
No 294
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.36 E-value=3.7e-06 Score=70.59 Aligned_cols=180 Identities=20% Similarity=0.275 Sum_probs=113.0
Q ss_pred EEECC--CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q 018675 124 VSWNA--SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH 201 (352)
Q Consensus 124 v~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~ 201 (352)
++|+- .+.+ ++.+.+..+-+-++..+-. ..+. ....|.+++|...+++++.|...|.|..+|++...+.+..
T Consensus 217 CawSlni~gyh-fs~G~sqqv~L~nvetg~~----qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~ 290 (425)
T KOG2695|consen 217 CAWSLNIMGYH-FSVGLSQQVLLTNVETGHQ----QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGW 290 (425)
T ss_pred hhhhhccceee-ecccccceeEEEEeecccc----cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCc
Confidence 35542 2344 4556666677777654321 1122 3456888889888899999999999999999877666655
Q ss_pred eEeeeeccCCCCcccEEEEEEcC-CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecc-cCcceEEEEecC-
Q 018675 202 CVQTISESNNGHSSTIWALSFNA-KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY-HDRTIFSVHWSR- 278 (352)
Q Consensus 202 ~~~~~~~~~~~h~~~i~~l~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~- 278 (352)
+.+.+ -|.+.|+++..=. ++++|++.+.+|+|++||++..+..- + .-...++ +.....-+...+
T Consensus 291 ~a~rl-----yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~--~------V~qYeGHvN~~a~l~~~v~~e 357 (425)
T KOG2695|consen 291 CAQRL-----YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKK--S------VMQYEGHVNLSAYLPAHVKEE 357 (425)
T ss_pred ceEEE-----EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhccc--c------eeeeecccccccccccccccc
Confidence 66655 3888899987655 78899999999999999987543310 0 0011110 111111122233
Q ss_pred CceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEec
Q 018675 279 EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327 (352)
Q Consensus 279 ~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 327 (352)
.+.++++++|...++|......+..+... ....-+..|..++|.
T Consensus 358 eg~I~s~GdDcytRiWsl~~ghLl~tipf-----~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 358 EGSIFSVGDDCYTRIWSLDSGHLLCTIPF-----PYSASEVDIPSVAFD 401 (425)
T ss_pred cceEEEccCeeEEEEEecccCceeeccCC-----CCccccccccceehh
Confidence 56889999999999998765444332211 112233456667764
No 295
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.31 E-value=0.00057 Score=62.17 Aligned_cols=140 Identities=11% Similarity=0.058 Sum_probs=79.8
Q ss_pred ceEEEEECCCCCE-EEEEeCC---CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCC--CcEEEEecC
Q 018675 76 TVRSCAWSPSGKL-LATASFD---ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRD--KSVWIWEVM 148 (352)
Q Consensus 76 ~v~~~~~s~~~~~-l~s~~~d---~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d--~~v~vwd~~ 148 (352)
....-.|+|||+. ++..+.+ ..|.++|..+++...+.. ..+.+....|+|+|+.++ +.+.+ ..|.++++.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~---~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~ 265 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS---SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTN 265 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec---CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECC
Confidence 5667899999985 6655554 356677777765444432 345566788999998654 44434 456666765
Q ss_pred CCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CC--cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DN--TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 149 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
.+. ... +..+........|+|+++.++-.+. .+ .|.+.++.... . ..+... +. . ...|+|+
T Consensus 266 ~g~-~~~---LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~---~---~rlt~~--g~--~--~~~~SPD 329 (419)
T PRK04043 266 TKT-LTQ---ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGS---V---EQVVFH--GK--N--NSSVSTY 329 (419)
T ss_pred CCc-EEE---cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCC---e---EeCccC--CC--c--CceECCC
Confidence 443 222 2222222334579999987765553 34 34444443221 1 111110 11 1 2379999
Q ss_pred CCEEEEEeC
Q 018675 226 GDKLVSCSD 234 (352)
Q Consensus 226 ~~~l~s~~~ 234 (352)
|++++-.+.
T Consensus 330 G~~Ia~~~~ 338 (419)
T PRK04043 330 KNYIVYSSR 338 (419)
T ss_pred CCEEEEEEc
Confidence 998876654
No 296
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.26 E-value=0.002 Score=54.75 Aligned_cols=208 Identities=15% Similarity=0.189 Sum_probs=116.7
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCe-EEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC-----CcEE
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKT-VRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD-----ATTC 99 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~-v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----~~i~ 99 (352)
+++.+|.. +..++-+-.-|+ ..+||..++......... .. ...--...||+||++|.+.-.| |.|-
T Consensus 9 ~~a~~p~~-----~~avafaRRPG~~~~v~D~~~g~~~~~~~a~-~g--RHFyGHg~fs~dG~~LytTEnd~~~g~G~Ig 80 (305)
T PF07433_consen 9 GVAAHPTR-----PEAVAFARRPGTFALVFDCRTGQLLQRLWAP-PG--RHFYGHGVFSPDGRLLYTTENDYETGRGVIG 80 (305)
T ss_pred ceeeCCCC-----CeEEEEEeCCCcEEEEEEcCCCceeeEEcCC-CC--CEEecCEEEcCCCCEEEEeccccCCCcEEEE
Confidence 46667743 244555544443 556777666432211110 00 1112235799999999886544 7899
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-------CC-----------cEEEEecCCCCeeEEEEEe--
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-------DK-----------SVWIWEVMPGNEFECVSVL-- 159 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-------d~-----------~v~vwd~~~~~~~~~~~~~-- 159 (352)
+||.. ..+..+..+..|.-....+.+.|+|+.|+.+-. .| ++.+-|..++...+. ..+
T Consensus 81 Vyd~~-~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q-~~Lp~ 158 (305)
T PF07433_consen 81 VYDAA-RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQ-VELPP 158 (305)
T ss_pred EEECc-CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeee-eecCc
Confidence 99976 345667777777666788999999976665521 12 222233333332221 223
Q ss_pred ecCccCeeEEEEcCCCCEEEEEeCCCc-------EEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 160 QGHAQDVKMVQWHPTMDVLFSCSYDNT-------IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 160 ~~h~~~v~~~~~~~~~~~l~s~~~d~~-------i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
.-|...+..+++.+++..++..-..+. +-++.-... .....-...........|-+|++++++.+++..
T Consensus 159 ~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~----~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~t 234 (305)
T PF07433_consen 159 DLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGA----LRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVT 234 (305)
T ss_pred cccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCc----ceeccCChHHHHhhCCceEEEEEeCCCCEEEEE
Confidence 336677899999988876655544332 222211110 000000001112334678899999999877654
Q ss_pred -eCCCcEEEEcCCccc
Q 018675 233 -SDDLTIKIWGADITR 247 (352)
Q Consensus 233 -~~dg~i~iwd~~~~~ 247 (352)
=..|.+.+||.....
T Consensus 235 sPrGg~~~~~d~~tg~ 250 (305)
T PF07433_consen 235 SPRGGRVAVWDAATGR 250 (305)
T ss_pred CCCCCEEEEEECCCCC
Confidence 467899999876443
No 297
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.24 E-value=2.8e-05 Score=70.17 Aligned_cols=72 Identities=18% Similarity=0.324 Sum_probs=60.5
Q ss_pred eecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC
Q 018675 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~ 148 (352)
.+..|.+++++|+...++.|..||++.+||...+. .......-.++.++|+|+|..++.|+..|.+.+||+.
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~----t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGV----TLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCe----eeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 56789999999999999999999999999976542 2222334567899999999999999999999999974
No 298
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.21 E-value=2e-05 Score=71.08 Aligned_cols=113 Identities=16% Similarity=0.203 Sum_probs=78.6
Q ss_pred eEEEEECC-CCCEEEEE----eCCCc----EEEEEccCCceeeeEee-ccccCCeeEEEECCCCcEEEEeeCCCcEEEEe
Q 018675 77 VRSCAWSP-SGKLLATA----SFDAT----TCIWEDVGGDYECVATL-EGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146 (352)
Q Consensus 77 v~~~~~s~-~~~~l~s~----~~d~~----i~i~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd 146 (352)
..++.||. ++..+.+. +.+|. .++|+...++.+.+... -.....|.|++++|+.+.|+.|+.||+|.+||
T Consensus 208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD 287 (545)
T PF11768_consen 208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYD 287 (545)
T ss_pred cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEE
Confidence 35667776 33444443 22332 34666655544443322 24667899999999999999999999999999
Q ss_pred cCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCC
Q 018675 147 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAED 194 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 194 (352)
...+-. ......-..+.++|||++.++++|+..|.+.+||+.-
T Consensus 288 ~~~~~t-----~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 288 TTRGVT-----LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred cCCCee-----eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 754421 1112233467899999999999999999999998754
No 299
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.15 E-value=0.0016 Score=59.30 Aligned_cols=181 Identities=8% Similarity=0.063 Sum_probs=97.0
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCC---CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE-EeCCC--
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGD---KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT-ASFDA-- 96 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D---~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~~~d~-- 96 (352)
.+....|+|+. ...++-.+.+ ..|.++++.+++. .... . ..+......|+|||+.|+. .+.++
T Consensus 189 ~~~~p~wSpDG-----~~~i~y~s~~~~~~~Iyv~dl~tg~~----~~lt-~-~~g~~~~~~~SPDG~~la~~~~~~g~~ 257 (419)
T PRK04043 189 LNIFPKWANKE-----QTAFYYTSYGERKPTLYKYNLYTGKK----EKIA-S-SQGMLVVSDVSKDGSKLLLTMAPKGQP 257 (419)
T ss_pred CeEeEEECCCC-----CcEEEEEEccCCCCEEEEEECCCCcE----EEEe-c-CCCcEEeeEECCCCCEEEEEEccCCCc
Confidence 45678899973 1234433433 4566667766532 1111 1 2344566789999987664 33343
Q ss_pred cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CC--cEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 97 ~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.|.+++..++....+ ..+........|+|+|+.|+-.+. .+ .|.+.|+..+.... + ...+.. ...|+|
T Consensus 258 ~Iy~~dl~~g~~~~L---T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~r-l-t~~g~~----~~~~SP 328 (419)
T PRK04043 258 DIYLYDTNTKTLTQI---TNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQ-V-VFHGKN----NSSVST 328 (419)
T ss_pred EEEEEECCCCcEEEc---ccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEe-C-ccCCCc----CceECC
Confidence 455656655543333 222332345679999987665553 33 45566665443211 1 111211 247999
Q ss_pred CCCEEEEEeCC---------CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC
Q 018675 174 TMDVLFSCSYD---------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 174 ~~~~l~s~~~d---------~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~ 234 (352)
+++.++..+.. ..|.+.++.... . ..+... + ......|+|||+.++-...
T Consensus 329 DG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~---~---~~LT~~--~---~~~~p~~SPDG~~I~f~~~ 387 (419)
T PRK04043 329 YKNYIVYSSRETNNEFGKNTFNLYLISTNSDY---I---RRLTAN--G---VNQFPRFSSDGGSIMFIKY 387 (419)
T ss_pred CCCEEEEEEcCCCcccCCCCcEEEEEECCCCC---e---EECCCC--C---CcCCeEECCCCCEEEEEEc
Confidence 99987765543 245555543322 1 122111 1 1224789999998765543
No 300
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.10 E-value=9.2e-05 Score=69.99 Aligned_cols=147 Identities=17% Similarity=0.257 Sum_probs=103.5
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC---------CCcEEEEecCCCCee
Q 018675 83 SPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR---------DKSVWIWEVMPGNEF 153 (352)
Q Consensus 83 s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---------d~~v~vwd~~~~~~~ 153 (352)
-.+++.+.+|...|+|.+-|..+- +.+.++.+|++.|..+. -.|++|++||. |.-|+|||++.-+..
T Consensus 184 R~Nnr~lf~G~t~G~V~LrD~~s~--~~iht~~aHs~siSDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral 259 (1118)
T KOG1275|consen 184 RYNNRNLFCGDTRGTVFLRDPNSF--ETIHTFDAHSGSISDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRAL 259 (1118)
T ss_pred EecCcEEEeecccceEEeecCCcC--ceeeeeeccccceeeee--ccCCeEEEeecccccccccccchhhhhhhhhhhcc
Confidence 346789999999999999886544 56788999999987654 57889999974 457889998765543
Q ss_pred EEEEEeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 154 ECVSVLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
.++. -+. .-.-+.|+|.- ..+++++..|...+-+.....+......+ . ...++.+.+++++++++.|+-|
T Consensus 260 ~PI~---~~~-~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~-v----~p~~s~i~~fDiSsn~~alafg 330 (1118)
T KOG1275|consen 260 SPIQ---FPY-GPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKM-V----NPNGSGISAFDISSNGDALAFG 330 (1118)
T ss_pred CCcc---ccc-CchhhhhcccccceEEEEecccceeeccccccCCCccceeE-E----ccCCCcceeEEecCCCceEEEe
Confidence 3332 122 22456788864 36788899999888863221111011111 1 1234568999999999999999
Q ss_pred eCCCcEEEEc
Q 018675 233 SDDLTIKIWG 242 (352)
Q Consensus 233 ~~dg~i~iwd 242 (352)
..+|.|.+|.
T Consensus 331 d~~g~v~~wa 340 (1118)
T KOG1275|consen 331 DHEGHVNLWA 340 (1118)
T ss_pred cccCcEeeec
Confidence 9999999995
No 301
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.10 E-value=0.0028 Score=56.46 Aligned_cols=195 Identities=13% Similarity=0.179 Sum_probs=118.4
Q ss_pred cceEEEEEccCCCCCCCccEEEE-----eeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe---
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFAS-----CSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS--- 93 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s-----~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~--- 93 (352)
..|....|+|..+ ++.||. .+.++++++|.+..+..+ ..+..+ ...=..+.|.+.|++|+.=.
T Consensus 174 ~gi~dFsisP~~n----~~~la~~tPEk~~kpa~~~i~sIp~~s~l-~tk~lf----k~~~~qLkW~~~g~~ll~l~~t~ 244 (561)
T COG5354 174 VGILDFSISPEGN----HDELAYWTPEKLNKPAMVRILSIPKNSVL-VTKNLF----KVSGVQLKWQVLGKYLLVLVMTH 244 (561)
T ss_pred cceeeEEecCCCC----CceEEEEccccCCCCcEEEEEEccCCCee-eeeeeE----eecccEEEEecCCceEEEEEEEe
Confidence 4566667777532 233332 367788999988744322 212222 11224567888888765421
Q ss_pred --------CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee--CCCcEEEEecCCCCeeEEEEEeecCc
Q 018675 94 --------FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG--RDKSVWIWEVMPGNEFECVSVLQGHA 163 (352)
Q Consensus 94 --------~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~h~ 163 (352)
...++.|++...... . ....-.++|..+.|.|.++.|+..+ .+-++.++|++.. ... ....
T Consensus 245 ~ksnKsyfgesnLyl~~~~e~~i-~--V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N----l~~--~~Pe 315 (561)
T COG5354 245 TKSNKSYFGESNLYLLRITERSI-P--VEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN----LRF--YFPE 315 (561)
T ss_pred eecccceeccceEEEEeeccccc-c--eeccccccceeeeecccCCceeEEecccccceeecccccc----eEE--ecCC
Confidence 123456665442221 1 1114468999999999988877665 6778889998532 111 2223
Q ss_pred cCeeEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe------C
Q 018675 164 QDVKMVQWHPTMDVLFSCSYD---NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS------D 234 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~------~ 234 (352)
+.=+.+-|+|.+++++.++.| |.+.+|+..+ .+.+...+. + ....-+.|+|+++++.+.. .
T Consensus 316 ~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~----rf~~~~~~~----~--~n~s~~~wspd~qF~~~~~ts~k~~~ 385 (561)
T COG5354 316 QKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAG----RFKVAGAFN----G--LNTSYCDWSPDGQFYDTDTTSEKLRV 385 (561)
T ss_pred cccccccccCcccEEEEecCCccccceEEeccCC----ceEEEEEee----c--CCceEeeccCCceEEEecCCCccccc
Confidence 334567799999999988876 5788996543 234443332 1 2233468999999987764 3
Q ss_pred CCcEEEEcCC
Q 018675 235 DLTIKIWGAD 244 (352)
Q Consensus 235 dg~i~iwd~~ 244 (352)
|+.++|||+.
T Consensus 386 Dn~i~l~~v~ 395 (561)
T COG5354 386 DNSIKLWDVY 395 (561)
T ss_pred CcceEEEEec
Confidence 7889999875
No 302
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.09 E-value=4.5e-06 Score=75.61 Aligned_cols=205 Identities=14% Similarity=0.213 Sum_probs=122.0
Q ss_pred cceEEEEECCC--CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEee----CCCcEEEEec
Q 018675 75 RTVRSCAWSPS--GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCG----RDKSVWIWEV 147 (352)
Q Consensus 75 ~~v~~~~~s~~--~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~----~d~~v~vwd~ 147 (352)
..+.|+++.-+ ..+++.|..+|.|.+-......-.......+|....++++|++ |.+.||+|- .|-.+.+||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 35566666543 3578899999999987654322122334456777889999988 556677663 4568999998
Q ss_pred CCC--CeeEEEEEeec-CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC
Q 018675 148 MPG--NEFECVSVLQG-HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224 (352)
Q Consensus 148 ~~~--~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~ 224 (352)
... .+.+. ..+.+ --....+++|..+.+.+++|...+.+.++|++..... ... -.+..+..+..+|
T Consensus 137 ~s~ltvPke~-~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~----~~s------vnTk~vqG~tVdp 205 (783)
T KOG1008|consen 137 NSLLTVPKES-PLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDS----VSS------VNTKYVQGITVDP 205 (783)
T ss_pred ccccCCCccc-cccccccccCccccccccCcchhhcccccchhhhhhhhhhhhh----hhh------hhhhhcccceecC
Confidence 654 11111 11222 2234557778877888999999999999987632110 011 1233456677888
Q ss_pred -CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC--CceEEecCCCC-eEEEEEcc
Q 018675 225 -KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR--EGIIASGAADD-SVQFFVES 297 (352)
Q Consensus 225 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~s~~~d~-~v~~~~~~ 297 (352)
.+.|+++-. ||.|.+||.... .+..+. .+..-.......++.++|.| .|.+++...|. +|+.++..
T Consensus 206 ~~~nY~cs~~-dg~iAiwD~~rn---ienpl~---~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 206 FSPNYFCSNS-DGDIAIWDTYRN---IENPLQ---IILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred CCCCceeccc-cCceeeccchhh---hccHHH---HHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 777887766 999999994211 100000 00000000112367777777 45677777664 67777543
No 303
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.09 E-value=0.0046 Score=52.09 Aligned_cols=196 Identities=14% Similarity=0.176 Sum_probs=112.7
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEEC-CCCCEEEEEeCCCcEEEEEcc
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS-PSGKLLATASFDATTCIWEDV 104 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~~~d~~i~i~~~~ 104 (352)
++.|.+.+ +.++++--..+.|..|+..+.... .+ .......+++. ++++++++ .. +.+.++|..
T Consensus 4 gp~~d~~~-----g~l~~~D~~~~~i~~~~~~~~~~~-----~~---~~~~~~G~~~~~~~g~l~v~-~~-~~~~~~d~~ 68 (246)
T PF08450_consen 4 GPVWDPRD-----GRLYWVDIPGGRIYRVDPDTGEVE-----VI---DLPGPNGMAFDRPDGRLYVA-DS-GGIAVVDPD 68 (246)
T ss_dssp EEEEETTT-----TEEEEEETTTTEEEEEETTTTEEE-----EE---ESSSEEEEEEECTTSEEEEE-ET-TCEEEEETT
T ss_pred ceEEECCC-----CEEEEEEcCCCEEEEEECCCCeEE-----EE---ecCCCceEEEEccCCEEEEE-Ec-CceEEEecC
Confidence 46777743 467777667889999998765321 11 11225666777 67665554 44 445566877
Q ss_pred CCceeeeEeec--c-ccCCeeEEEECCCCcEEEEeeCC--------CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 105 GGDYECVATLE--G-HENEVKSVSWNASGTLLATCGRD--------KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 105 ~~~~~~~~~~~--~-h~~~v~~v~~~~~~~~l~s~~~d--------~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
+++...+.... . .....+.+++.|+|++.++.... +.+..++. ......+ .......+.++|+|
T Consensus 69 ~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~--~~~~~~~---~~~~~~pNGi~~s~ 143 (246)
T PF08450_consen 69 TGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDP--DGKVTVV---ADGLGFPNGIAFSP 143 (246)
T ss_dssp TTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEET--TSEEEEE---EEEESSEEEEEEET
T ss_pred CCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECC--CCeEEEE---ecCcccccceEECC
Confidence 77666555542 2 23567899999999988776644 33555554 3322222 12234467899999
Q ss_pred CCCEEE-EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 174 TMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 174 ~~~~l~-s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
+++.|+ +-+..+.|..++...... .......+.. ........-.+++..+|++.++.-..+.|.+++.
T Consensus 144 dg~~lyv~ds~~~~i~~~~~~~~~~-~~~~~~~~~~-~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p 212 (246)
T PF08450_consen 144 DGKTLYVADSFNGRIWRFDLDADGG-ELSNRRVFID-FPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP 212 (246)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTC-CEEEEEEEEE--SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET
T ss_pred cchheeecccccceeEEEecccccc-ceeeeeeEEE-cCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC
Confidence 998765 556677777776643221 0111111111 1111123566888888888777777777777753
No 304
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.05 E-value=0.0002 Score=66.96 Aligned_cols=189 Identities=15% Similarity=0.124 Sum_probs=116.9
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
..+.++|++++. .+|+=|.-+|.|.+.+..... . ....|... ..+|.++++|+.||++.
T Consensus 38 ~~D~is~~av~~--------~~~~~GtH~g~v~~~~~~~~~-----~--~~~~~s~~------~~~Gey~asCS~DGkv~ 96 (846)
T KOG2066|consen 38 QNDAISCCAVHD--------KFFALGTHRGAVYLTTCQGNP-----K--TNFDHSSS------ILEGEYVASCSDDGKVV 96 (846)
T ss_pred hhhHHHHHHhhc--------ceeeeccccceEEEEecCCcc-----c--cccccccc------ccCCceEEEecCCCcEE
Confidence 346677776654 588888899999998765321 1 11123322 66899999999999999
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCC-----CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNAS-----GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-----~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
|--..+.+...... ...++.+|+++|+ ..++++||.-| +.++.-.--+....+ .+..-.++|.++.|.
T Consensus 97 I~sl~~~~~~~~~d---f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~-- 169 (846)
T KOG2066|consen 97 IGSLFTDDEITQYD---FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWR-- 169 (846)
T ss_pred EeeccCCccceeEe---cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEec--
Confidence 88666554333332 3468999999997 56899999988 766652111111111 244455789999996
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccC--CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN--NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~--~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
+++++-++.+| +++|+...... +..+.... ..-...-..+.|.++.++++ |...+|+|..++
T Consensus 170 g~lIAWand~G-v~vyd~~~~~~-----l~~i~~p~~~~R~e~fpphl~W~~~~~LVI--GW~d~v~i~~I~ 233 (846)
T KOG2066|consen 170 GNLIAWANDDG-VKVYDTPTRQR-----LTNIPPPSQSVRPELFPPHLHWQDEDRLVI--GWGDSVKICSIK 233 (846)
T ss_pred CcEEEEecCCC-cEEEeccccce-----eeccCCCCCCCCcccCCCceEecCCCeEEE--ecCCeEEEEEEe
Confidence 45677776666 89998655321 11111100 00112233577877766554 445578888775
No 305
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.04 E-value=0.0013 Score=62.22 Aligned_cols=206 Identities=18% Similarity=0.227 Sum_probs=123.1
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC-eeEEEEcCCCCEEEEEeCCCc-----EEEEecC
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD-VKMVQWHPTMDVLFSCSYDNT-----IKVWWAE 193 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~d~~-----i~iw~~~ 193 (352)
.+.| |++++..++-|+.+|.|.+.+- ..+.+..++++... +..+.......+|++-++|.. ++||+++
T Consensus 27 ~isc--~~s~~~~vvigt~~G~V~~Ln~----s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~le 100 (933)
T KOG2114|consen 27 AISC--CSSSTGSVVIGTADGRVVILNS----SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLE 100 (933)
T ss_pred ceeE--EcCCCceEEEeeccccEEEecc----cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccc
Confidence 4444 4688889999999998877662 23444667777766 444433334467888877754 8999987
Q ss_pred CCCCCC-ceeEe--eeec-cCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCc
Q 018675 194 DTDSDN-WHCVQ--TISE-SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 269 (352)
Q Consensus 194 ~~~~~~-~~~~~--~~~~-~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (352)
..+.++ -.+.. .+.. .......++.+++.+.+-..+|.|=.+|.|..+.-+..+... ...........
T Consensus 101 k~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrg--------sr~~~~~~~~~ 172 (933)
T KOG2114|consen 101 KVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRG--------SRQDYSHRGKE 172 (933)
T ss_pred ccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccc--------cceeeeccCCC
Confidence 764433 34442 2222 222246788899999998889999899999999544322110 01112222345
Q ss_pred ceEEEEecCCceE-EecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 270 TIFSVHWSREGII-ASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 270 ~i~~~~~~~~~~~-~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
+|+.+.+-.++.. +=+.....|..|..+.. . ...+....|...++|-+|++...++++++ +.-+.+|+.
T Consensus 173 pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr------~--p~~~~ld~~G~~lnCss~~~~t~qfIca~--~e~l~fY~s 242 (933)
T KOG2114|consen 173 PITGLALRSDGKSVLFVATTEQVMLYSLSGR------T--PSLKVLDNNGISLNCSSFSDGTYQFICAG--SEFLYFYDS 242 (933)
T ss_pred CceeeEEecCCceeEEEEecceeEEEEecCC------C--cceeeeccCCccceeeecCCCCccEEEec--CceEEEEcC
Confidence 6777666554421 12223344555544321 1 11233567888999999998655455444 445777765
Q ss_pred c
Q 018675 349 A 349 (352)
Q Consensus 349 ~ 349 (352)
.
T Consensus 243 d 243 (933)
T KOG2114|consen 243 D 243 (933)
T ss_pred C
Confidence 4
No 306
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.03 E-value=0.00093 Score=62.45 Aligned_cols=51 Identities=25% Similarity=0.591 Sum_probs=39.9
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeee
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCK 66 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~ 66 (352)
+..++.|.+.|..++|-|.+. ....+|+.-..-.++-+|+..+++++|+..
T Consensus 102 ~~~l~~~~~~~qdl~W~~~rd--~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ 152 (1062)
T KOG1912|consen 102 INWLSHSNDSVQDLCWVPARD--DSRDVLLAIHGSSTLVLWNTDTGEKFWKYD 152 (1062)
T ss_pred hhhhcCCCcchhheeeeeccC--cchheeEEecCCcEEEEEEccCCceeeccc
Confidence 345778999999999988542 124678888888999999999999888754
No 307
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.95 E-value=0.00055 Score=64.54 Aligned_cols=107 Identities=22% Similarity=0.381 Sum_probs=78.5
Q ss_pred EEEccCCCCCCCccEEEEeeC----CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 27 LAWKPTAGVDGVAPVFASCSG----DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 27 i~~~p~~~~~~~~~~l~s~s~----D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
++|+|. .|+||.++- .|+|.||-- ++. +...+. ..-.+++++|+|..-.|+.|-.-|.+.+|.
T Consensus 21 ~SWHPs------ePlfAVA~fS~er~GSVtIfad-tGE----Pqr~Vt--~P~hatSLCWHpe~~vLa~gwe~g~~~v~~ 87 (1416)
T KOG3617|consen 21 SSWHPS------EPLFAVASFSPERGGSVTIFAD-TGE----PQRDVT--YPVHATSLCWHPEEFVLAQGWEMGVSDVQK 87 (1416)
T ss_pred cccCCC------CceeEEEEecCCCCceEEEEec-CCC----CCcccc--cceehhhhccChHHHHHhhccccceeEEEe
Confidence 579997 478888864 488888832 221 111110 122356799999988899998889999997
Q ss_pred ccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC
Q 018675 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 103 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~ 148 (352)
..+. +.-.....|..+|..+.|+++|..++|+..=|.+.+|...
T Consensus 88 ~~~~--e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 88 TNTT--ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred cCCc--eeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 5433 3334456799999999999999999999999999999864
No 308
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.95 E-value=0.012 Score=51.87 Aligned_cols=232 Identities=11% Similarity=0.069 Sum_probs=113.7
Q ss_pred CCCeEEEEecCCCceeeeeeeee--ecceecceEEEEECCCCCEEEEEeC--CCcEEEEEccCCceeeeEeeccccCCee
Q 018675 47 GDKTVRIWEQSASSRFWNCKAVL--EEMHTRTVRSCAWSPSGKLLATASF--DATTCIWEDVGGDYECVATLEGHENEVK 122 (352)
Q Consensus 47 ~D~~v~~w~~~~~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~--d~~i~i~~~~~~~~~~~~~~~~h~~~v~ 122 (352)
.+..|.+||..+.+.......-- +...-..-...+++|||++|..... +..+.+.|..+.+. +..+.- .+...
T Consensus 75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kv--v~ei~v-p~~~~ 151 (352)
T TIGR02658 75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAF--VRMMDV-PDCYH 151 (352)
T ss_pred CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcE--EEEEeC-CCCcE
Confidence 58999999998875433222100 0000112346789999999887663 57899998876542 333321 11111
Q ss_pred EEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE--EeecCccCee-EEEEcC-CCCEEEEEeCCCcEEEEecCCCCCC
Q 018675 123 SVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS--VLQGHAQDVK-MVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 123 ~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~h~~~v~-~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~ 198 (352)
-...+.... . .-+.|++.....+...+...... .+......+- .-.+.+ ++..++...+ |.|.+.|+......
T Consensus 152 vy~t~e~~~-~-~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~ 228 (352)
T TIGR02658 152 IFPTANDTF-F-MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAK 228 (352)
T ss_pred EEEecCCcc-E-EEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcce
Confidence 111111111 1 12334443333322211111001 1111000000 003344 7777776666 99999986543222
Q ss_pred CceeEeeeecc---CCCCcccEEEEEEcCCCCEEEEEeC----------CCcEEEEcCCccccccCCCCccceeeEEeec
Q 018675 199 NWHCVQTISES---NNGHSSTIWALSFNAKGDKLVSCSD----------DLTIKIWGADITRMQSGDGYASWRHLCTISG 265 (352)
Q Consensus 199 ~~~~~~~~~~~---~~~h~~~i~~l~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 265 (352)
.......+... ..-....+.-++++|+++.+..... .+.|.++|....+ ....+.
T Consensus 229 ~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k-----------vi~~i~- 296 (352)
T TIGR02658 229 FLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK-----------RLRKIE- 296 (352)
T ss_pred ecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe-----------EEEEEe-
Confidence 11111111110 0112334445899999887776431 2478888865332 222222
Q ss_pred ccCcceEEEEecCCce---EEecCCCCeEEEEEcc
Q 018675 266 YHDRTIFSVHWSREGI---IASGAADDSVQFFVES 297 (352)
Q Consensus 266 ~~~~~i~~~~~~~~~~---~~s~~~d~~v~~~~~~ 297 (352)
-...+..+.+++++. +++...++.+.+++..
T Consensus 297 -vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~ 330 (352)
T TIGR02658 297 -LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAE 330 (352)
T ss_pred -CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECc
Confidence 234577888888764 4444467778888654
No 309
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.94 E-value=0.0037 Score=59.29 Aligned_cols=196 Identities=11% Similarity=0.164 Sum_probs=115.3
Q ss_pred EECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCC-eeEEEECCCCcEEEEeeCCC-----cEEEEecCCC---C
Q 018675 81 AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDK-----SVWIWEVMPG---N 151 (352)
Q Consensus 81 ~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~~~d~-----~v~vwd~~~~---~ 151 (352)
.|++++..++.|+.+|.|.+.+. .......++.+... |.-+-.-...++|++.+.|. .+++|++... +
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~---s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~ 106 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNS---SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN 106 (933)
T ss_pred EEcCCCceEEEeeccccEEEecc---cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence 36788899999999999988753 22333455666665 44333333446888888775 4899998543 1
Q ss_pred eeEEE--EEeec-----CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC
Q 018675 152 EFECV--SVLQG-----HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224 (352)
Q Consensus 152 ~~~~~--~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~ 224 (352)
+-.++ ..... .+.++.+++.+.+-..++.|=.+|.|..+.-.-.+.+..+ ..+ . ..-..+|+.|.+..
T Consensus 107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr--~~~--~-~~~~~pITgL~~~~ 181 (933)
T KOG2114|consen 107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSR--QDY--S-HRGKEPITGLALRS 181 (933)
T ss_pred CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccc--eee--e-ccCCCCceeeEEec
Confidence 12233 12222 3456788999998888888888999888732111111000 011 1 12357899999988
Q ss_pred CCCE-EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCce-EEecCCCCeEEEEEcc
Q 018675 225 KGDK-LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVES 297 (352)
Q Consensus 225 ~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~v~~~~~~ 297 (352)
++.. +.... -..|.+|.+.... +.......++.++.+..+++... +++++ ...+.+|+..
T Consensus 182 d~~s~lFv~T-t~~V~~y~l~gr~-----------p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd 243 (933)
T KOG2114|consen 182 DGKSVLFVAT-TEQVMLYSLSGRT-----------PSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSD 243 (933)
T ss_pred CCceeEEEEe-cceeEEEEecCCC-----------cceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCC
Confidence 8876 23333 3468888664111 11222234566677777776554 44443 4456677554
No 310
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=97.91 E-value=1.1e-05 Score=75.84 Aligned_cols=201 Identities=14% Similarity=0.230 Sum_probs=126.0
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
++...++..|...-+|++|+-.. .+|+.|+--|.|++++..++...... .-|..+|+-+.=+.||..++
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~------~hL~vG~~~Geik~~nv~sG~~e~s~-----ncH~SavT~vePs~dgs~~L 1159 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGT------NHLAVGSHAGEIKIFNVSSGSMEESV-----NCHQSAVTLVEPSVDGSTQL 1159 (1516)
T ss_pred cccchhhhccccceeeEEeecCC------ceEEeeeccceEEEEEccCccccccc-----cccccccccccccCCcceee
Confidence 46667788899999999999864 68999999999999999887543221 34888999888888998777
Q ss_pred EEeCCC--cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEE-EEEeecCccCee
Q 018675 91 TASFDA--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC-VSVLQGHAQDVK 167 (352)
Q Consensus 91 s~~~d~--~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~h~~~v~ 167 (352)
+.+.-. -..+|+... .......+. +-.++.|+.....-+.|.......+||++.+..... +....+.+..-+
T Consensus 1160 tsss~S~PlsaLW~~~s-~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n 1234 (1516)
T KOG1832|consen 1160 TSSSSSSPLSALWDASS-TGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNN 1234 (1516)
T ss_pred eeccccCchHHHhcccc-ccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhcc
Confidence 655433 466887643 222233322 345788876544323333334578999987654322 112223333446
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
++.|+|++.+++ .||. +||++... .++.+.. ....+ .=.|+|+|..++--+ -|||++..+
T Consensus 1235 ~a~FsP~D~LIl---ndGv--LWDvR~~~-----aIh~FD~----ft~~~-~G~FHP~g~eVIINS-----EIwD~RTF~ 1294 (1516)
T KOG1832|consen 1235 LAHFSPCDTLIL---NDGV--LWDVRIPE-----AIHRFDQ----FTDYG-GGGFHPSGNEVIINS-----EIWDMRTFK 1294 (1516)
T ss_pred ccccCCCcceEe---eCce--eeeeccHH-----HHhhhhh----heecc-cccccCCCceEEeec-----hhhhhHHHH
Confidence 788999988765 4664 68766531 1221111 00001 124899998888765 478876543
No 311
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.84 E-value=0.00095 Score=62.58 Aligned_cols=140 Identities=21% Similarity=0.322 Sum_probs=89.3
Q ss_pred CccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-----CCEEEEEeCCCcEEEEEcc-CCceeee
Q 018675 38 VAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-----GKLLATASFDATTCIWEDV-GGDYECV 111 (352)
Q Consensus 38 ~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-----~~~l~s~~~d~~i~i~~~~-~~~~~~~ 111 (352)
.|.+++|||.||+|.|-.+.+.....+ .....++.+++++|+ .+.+++|+.-| +.++... -+....+
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~------~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v 154 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQ------YDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV 154 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCcccee------EecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce
Confidence 378999999999999988766543211 113478999999997 57888998888 7676421 0111112
Q ss_pred EeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe------eEEEEcCCCCEEEEEeCCC
Q 018675 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV------KMVQWHPTMDVLFSCSYDN 185 (352)
Q Consensus 112 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v------~~~~~~~~~~~l~s~~~d~ 185 (352)
.+..-.++|.+++|. |+++|=++.+| |+|+|+........+. ..+ ..+ ..+.|.++. .|+.| +..
T Consensus 155 -~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~--~p~-~~~R~e~fpphl~W~~~~-~LVIG-W~d 225 (846)
T KOG2066|consen 155 -VLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIP--PPS-QSVRPELFPPHLHWQDED-RLVIG-WGD 225 (846)
T ss_pred -eeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccC--CCC-CCCCcccCCCceEecCCC-eEEEe-cCC
Confidence 334456899999996 47888888777 8999986543322111 111 222 246676654 44454 445
Q ss_pred cEEEEecC
Q 018675 186 TIKVWWAE 193 (352)
Q Consensus 186 ~i~iw~~~ 193 (352)
+|+|..+.
T Consensus 226 ~v~i~~I~ 233 (846)
T KOG2066|consen 226 SVKICSIK 233 (846)
T ss_pred eEEEEEEe
Confidence 57777665
No 312
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=97.83 E-value=0.0035 Score=61.58 Aligned_cols=201 Identities=13% Similarity=0.260 Sum_probs=118.1
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~ 101 (352)
+.|.++.|..+. ..+.-+..+|.+.+-|.++.. +.+.. .-...|.+.+||||++.++..+.++++.+-
T Consensus 69 ~~i~s~~fl~d~------~~i~v~~~~G~iilvd~et~~--~eivg----~vd~GI~aaswS~Dee~l~liT~~~tll~m 136 (1265)
T KOG1920|consen 69 DEIVSVQFLADT------NSICVITALGDIILVDPETLE--LEIVG----NVDNGISAASWSPDEELLALITGRQTLLFM 136 (1265)
T ss_pred cceEEEEEeccc------ceEEEEecCCcEEEEcccccc--eeeee----eccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence 688888887764 234555667778777766542 12221 134679999999999999988887777655
Q ss_pred EccCC---c--e--------eee--------Eeecc---------------------ccCCeeEEEECCCCcEEEEe---
Q 018675 102 EDVGG---D--Y--------ECV--------ATLEG---------------------HENEVKSVSWNASGTLLATC--- 136 (352)
Q Consensus 102 ~~~~~---~--~--------~~~--------~~~~~---------------------h~~~v~~v~~~~~~~~l~s~--- 136 (352)
...-. + . +.+ ..+.| -.+.=+.|+|..+|+++++.
T Consensus 137 T~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~ 216 (1265)
T KOG1920|consen 137 TKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVE 216 (1265)
T ss_pred eccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEe
Confidence 32100 0 0 000 00110 01112358999999998873
Q ss_pred -eCC-CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCCCceeEeeeeccCC
Q 018675 137 -GRD-KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS---YDNTIKVWWAEDTDSDNWHCVQTISESNN 211 (352)
Q Consensus 137 -~~d-~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 211 (352)
..+ ++++|||-. +. ...... .....-.+++|-|.|..+++-. .|+.|.++.-+....+.+. +. ..
T Consensus 217 ~~~~~RkirV~drE-g~-Lns~se--~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~----l~--~p 286 (1265)
T KOG1920|consen 217 SETGTRKIRVYDRE-GA-LNSTSE--PVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFV----LP--FP 286 (1265)
T ss_pred ccCCceeEEEeccc-ch-hhcccC--cccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccc----cC--Cc
Confidence 234 899999953 21 111111 1112234789999998887653 4557888843332222111 11 11
Q ss_pred CCcccEEEEEEcCCCCEEEE---EeCCCcEEEEcCC
Q 018675 212 GHSSTIWALSFNAKGDKLVS---CSDDLTIKIWGAD 244 (352)
Q Consensus 212 ~h~~~i~~l~~~~~~~~l~s---~~~dg~i~iwd~~ 244 (352)
.....|..|+|+.++..||. ......|++|-+.
T Consensus 287 ~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~ 322 (1265)
T KOG1920|consen 287 LDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTG 322 (1265)
T ss_pred ccccchheeeecCCCCceeeeecccccceEEEEEec
Confidence 12334889999999999887 5555569999653
No 313
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.83 E-value=0.00079 Score=63.56 Aligned_cols=71 Identities=20% Similarity=0.341 Sum_probs=55.6
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
.+++++|+|.. -.|+.|=.-|.+.+|+..+.+. ..+..-|+.+|.-+.||++|..++++..-|.+.+|.
T Consensus 61 hatSLCWHpe~------~vLa~gwe~g~~~v~~~~~~e~-----htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr 129 (1416)
T KOG3617|consen 61 HATSLCWHPEE------FVLAQGWEMGVSDVQKTNTTET-----HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWR 129 (1416)
T ss_pred ehhhhccChHH------HHHhhccccceeEEEecCCcee-----eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEE
Confidence 34679999973 4567766668899998776532 233355899999999999999999999999999997
Q ss_pred cc
Q 018675 103 DV 104 (352)
Q Consensus 103 ~~ 104 (352)
..
T Consensus 130 ~d 131 (1416)
T KOG3617|consen 130 YD 131 (1416)
T ss_pred ee
Confidence 53
No 314
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=97.82 E-value=0.00088 Score=63.68 Aligned_cols=185 Identities=17% Similarity=0.263 Sum_probs=110.1
Q ss_pred CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc
Q 018675 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209 (352)
Q Consensus 130 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 209 (352)
+..++-|+-...+..+|++..... ....-....++-+. .+++.+.+|...|+|.+-|.. +.+.++++
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~~e~---r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~-----s~~~iht~--- 213 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTEKET---RTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPN-----SFETIHTF--- 213 (1118)
T ss_pred Ccceeecchhhheeeeecccceee---eeeeccCCceEEEE--ecCcEEEeecccceEEeecCC-----cCceeeee---
Confidence 345666666666777887654322 11111222344333 466789999999999998543 34445554
Q ss_pred CCCCcccEEEEEEcCCCCEEEEEeCC---------CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc
Q 018675 210 NNGHSSTIWALSFNAKGDKLVSCSDD---------LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG 280 (352)
Q Consensus 210 ~~~h~~~i~~l~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 280 (352)
++|.+.|.. |+-.|+.|++||-. .-|+|||+++.+........ -......+..+-..
T Consensus 214 -~aHs~siSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~-----------~~P~flrf~Psl~t 279 (1118)
T KOG1275|consen 214 -DAHSGSISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFP-----------YGPQFLRFHPSLTT 279 (1118)
T ss_pred -eccccceee--eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccc-----------cCchhhhhcccccc
Confidence 478888865 55568999999864 45789998754332211100 11112222222334
Q ss_pred eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 281 IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 281 ~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
.++.+++.|...+.+... +. .+.... ......+..|.++.+|+.+. .+|-|..+|.|.+|.
T Consensus 280 ~~~V~S~sGq~q~vd~~~--ls-NP~~~~--~~v~p~~s~i~~fDiSsn~~-alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 280 RLAVTSQSGQFQFVDTAT--LS-NPPAGV--KMVNPNGSGISAFDISSNGD-ALAFGDHEGHVNLWA 340 (1118)
T ss_pred eEEEEecccceeeccccc--cC-CCccce--eEEccCCCcceeEEecCCCc-eEEEecccCcEeeec
Confidence 677777788877765321 11 111111 11223445599999999875 688999999999997
No 315
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=97.78 E-value=0.0042 Score=58.32 Aligned_cols=215 Identities=13% Similarity=0.161 Sum_probs=126.2
Q ss_pred eeeeeecCCccceEEEEEccCCCC-----CC-CccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGV-----DG-VAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP- 84 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~-----~~-~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~- 84 (352)
..+++++-|...|+.+.|.|.... ++ ...++|++.-.|.|.+||......... ...|.+++..+.|-|
T Consensus 46 q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~-----l~~~~~~~qdl~W~~~ 120 (1062)
T KOG1912|consen 46 QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINW-----LSHSNDSVQDLCWVPA 120 (1062)
T ss_pred hhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhh-----hcCCCcchhheeeeec
Confidence 566788899999999999984321 11 234566666679999999765432111 133667888888855
Q ss_pred --CC-CEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCC----eeEEE
Q 018675 85 --SG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGN----EFECV 156 (352)
Q Consensus 85 --~~-~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~----~~~~~ 156 (352)
+. ..|+.-..-+++.+|+-.+|+. .+. .........|+.+.| +...+..-+..|.+.+-+..... +.+..
T Consensus 121 rd~Srd~LlaIh~ss~lvLwntdtG~k-~Wk-~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~ 198 (1062)
T KOG1912|consen 121 RDDSRDVLLAIHGSSTLVLWNTDTGEK-FWK-YDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEF 198 (1062)
T ss_pred cCcchheeEEecCCcEEEEEEccCCce-eec-cccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeE
Confidence 34 4555556668999998777652 232 222334566788888 45555555556766666542111 11111
Q ss_pred EEeecCcc----------------C---------eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCC
Q 018675 157 SVLQGHAQ----------------D---------VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNN 211 (352)
Q Consensus 157 ~~~~~h~~----------------~---------v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 211 (352)
..-..|.. . ...++|+|..+.++-...-+.+.++|++-.. ++..+.-.
T Consensus 199 qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~-----~l~vvpie-- 271 (1062)
T KOG1912|consen 199 QITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYEC-----CLAVVPIE-- 271 (1062)
T ss_pred EEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhc-----eeEEEEec--
Confidence 11112211 0 1124578876655555677888888765421 22222211
Q ss_pred CCcccEEEEEEcC--CCCEEEEEeCCCcEEEEc
Q 018675 212 GHSSTIWALSFNA--KGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 212 ~h~~~i~~l~~~~--~~~~l~s~~~dg~i~iwd 242 (352)
.+.+.-+++-| ..+.|...-.||.+.+|-
T Consensus 272 --r~~akfv~vlP~~~rd~LfclH~nG~ltirv 302 (1062)
T KOG1912|consen 272 --RGGAKFVDVLPDPRRDALFCLHSNGRLTIRV 302 (1062)
T ss_pred --cCCcceeEeccCCCcceEEEEecCCeEEEEE
Confidence 12233355545 456788889999999994
No 316
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.77 E-value=1.8e-05 Score=71.81 Aligned_cols=208 Identities=13% Similarity=0.186 Sum_probs=120.2
Q ss_pred CCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-----CCcEEEEe
Q 018675 119 NEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-----DNTIKVWW 191 (352)
Q Consensus 119 ~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----d~~i~iw~ 191 (352)
..+.|++++-+ ...++.|..+|.|-+-.++..... ......++...+++++|.+-+...+++|. |..+.|||
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS-s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS-SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccc-cceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 34566666443 346788888898888765432211 12334567888999999986543334433 45799998
Q ss_pred cCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcce
Q 018675 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271 (352)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 271 (352)
+...-..+....+ +.. +-....++++|-.+.+++.+|.....++++|++..... ........+
T Consensus 136 i~s~ltvPke~~~-fs~---~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~-------------~~svnTk~v 198 (783)
T KOG1008|consen 136 INSLLTVPKESPL-FSS---STLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDS-------------VSSVNTKYV 198 (783)
T ss_pred cccccCCCccccc-ccc---ccccCccccccccCcchhhcccccchhhhhhhhhhhhh-------------hhhhhhhhc
Confidence 8664221111111 110 12234558899888889999999999999998632110 000112223
Q ss_pred EEEEecC--CceEEecCCCCeEEEEEccCCccccCcccc-eeeecccccCcceeEEEecCCCcceEEEecCC-CeEEEEe
Q 018675 272 FSVHWSR--EGIIASGAADDSVQFFVESKDDLIDGPSYK-MLLKKEKAHDMDVNSVQWSPGERRLLASASDD-GMIKIWE 347 (352)
Q Consensus 272 ~~~~~~~--~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~D-g~i~iw~ 347 (352)
..+..+| .+++++.. |+.+.+|+... +...+- .+.......-..+..++|.|....++++...| ++|++++
T Consensus 199 qG~tVdp~~~nY~cs~~-dg~iAiwD~~r----nienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlyd 273 (783)
T KOG1008|consen 199 QGITVDPFSPNYFCSNS-DGDIAIWDTYR----NIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYD 273 (783)
T ss_pred ccceecCCCCCceeccc-cCceeeccchh----hhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEec
Confidence 3344445 34555544 99999997311 111110 01111111122488999999876678888877 5788888
Q ss_pred ec
Q 018675 348 LA 349 (352)
Q Consensus 348 ~~ 349 (352)
+.
T Consensus 274 i~ 275 (783)
T KOG1008|consen 274 IC 275 (783)
T ss_pred cc
Confidence 74
No 317
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.74 E-value=0.0056 Score=54.24 Aligned_cols=144 Identities=13% Similarity=0.182 Sum_probs=96.8
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCC-eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCc
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDK-TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~-~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
+|...|.-..+.-+ +.-++.|-.|| .+-+++..+++. +. + ...-+.|.++..+|+|+.++.+.....
T Consensus 357 ~~~~~VrY~r~~~~------~e~~vigt~dgD~l~iyd~~~~e~----kr-~-e~~lg~I~av~vs~dGK~~vvaNdr~e 424 (668)
T COG4946 357 GKKGGVRYRRIQVD------PEGDVIGTNDGDKLGIYDKDGGEV----KR-I-EKDLGNIEAVKVSPDGKKVVVANDRFE 424 (668)
T ss_pred CCCCceEEEEEccC------CcceEEeccCCceEEEEecCCceE----EE-e-eCCccceEEEEEcCCCcEEEEEcCceE
Confidence 67777766655443 24577778888 899999887642 11 1 112367999999999999998877777
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC----cEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK----SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~----~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
+-+.|..+++...+. +...+-|+.+.|+|++.++|-+-.+| .|+++|+..++.+.. .+..+|. -+=+|.|
T Consensus 425 l~vididngnv~~id--kS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~v-TT~ta~D---fsPaFD~ 498 (668)
T COG4946 425 LWVIDIDNGNVRLID--KSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDV-TTPTAYD---FSPAFDP 498 (668)
T ss_pred EEEEEecCCCeeEec--ccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEe-cCCcccc---cCcccCC
Confidence 777788887654333 23456799999999999999776654 788999875543321 2222222 1234667
Q ss_pred CCCEEEE
Q 018675 174 TMDVLFS 180 (352)
Q Consensus 174 ~~~~l~s 180 (352)
++++|.-
T Consensus 499 d~ryLYf 505 (668)
T COG4946 499 DGRYLYF 505 (668)
T ss_pred CCcEEEE
Confidence 7776543
No 318
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.71 E-value=0.033 Score=50.25 Aligned_cols=266 Identities=11% Similarity=0.065 Sum_probs=132.9
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
+..++.++.++.+..+|..+++..|+....- ... .... .++..++.++.++.+..+|..+++.. .. ... .
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~--~~~---~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~-W~-~~~-~ 134 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDE--RLS---GGVG--ADGGLVFVGTEKGEVIALDAEDGKEL-WR-AKL-S 134 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCC--Ccc---cceE--EcCCEEEEEcCCCEEEEEECCCCcEe-ee-ecc-C
Confidence 3577888889999999998888777643211 011 1111 24667778888999999998777532 21 111 1
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe-----eEEEEcCCCCEEEEEeCCCcEEEEecC
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV-----KMVQWHPTMDVLFSCSYDNTIKVWWAE 193 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~~~d~~i~iw~~~ 193 (352)
+.+.+.-.- .+..++.++.++.+..+|...++.. .......... .+... .+..++.+..++.+..++..
T Consensus 135 ~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~---W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~ 208 (377)
T TIGR03300 135 SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERL---WTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQ 208 (377)
T ss_pred ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCcee---eEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEcc
Confidence 222211000 2446666778899999998766432 2211111110 00011 12356777778888888765
Q ss_pred CCCCCCceeEeeeeccCCCCc--ccEEEEEEcC--CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCc
Q 018675 194 DTDSDNWHCVQTISESNNGHS--STIWALSFNA--KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 269 (352)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~h~--~~i~~l~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (352)
... ..|.. .... ..+.. .....+.-+| .+..+..++.+|.+..+|.+..+ ..|... ..
T Consensus 209 tG~-~~W~~--~~~~-~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~-------~~W~~~--~~----- 270 (377)
T TIGR03300 209 TGQ-PLWEQ--RVAL-PKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGR-------VLWKRD--AS----- 270 (377)
T ss_pred CCC-Eeeee--cccc-CCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCc-------EEEeec--cC-----
Confidence 432 11211 0100 00000 0000010111 24577778889999999874321 123211 00
Q ss_pred ceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 270 TIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 270 ~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
....... .++.+..++.++.+..++........ . . ..... ......... +.. +..++.||.|.++|..
T Consensus 271 ~~~~p~~-~~~~vyv~~~~G~l~~~d~~tG~~~W----~-~--~~~~~-~~~ssp~i~--g~~-l~~~~~~G~l~~~d~~ 338 (377)
T TIGR03300 271 SYQGPAV-DDNRLYVTDADGVVVALDRRSGSELW----K-N--DELKY-RQLTAPAVV--GGY-LVVGDFEGYLHWLSRE 338 (377)
T ss_pred CccCceE-eCCEEEEECCCCeEEEEECCCCcEEE----c-c--ccccC-CccccCEEE--CCE-EEEEeCCCEEEEEECC
Confidence 0111111 24566677788888888664322110 0 0 00000 111111221 333 5568889999998875
Q ss_pred c
Q 018675 350 N 350 (352)
Q Consensus 350 ~ 350 (352)
+
T Consensus 339 t 339 (377)
T TIGR03300 339 D 339 (377)
T ss_pred C
Confidence 4
No 319
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.68 E-value=0.033 Score=49.03 Aligned_cols=227 Identities=15% Similarity=0.105 Sum_probs=117.5
Q ss_pred cCCccceeeeeeecCCccceEEEEEccCCCC-CCCccEEEEeeC----------CCeEEEEecCCC-ceeeeeeeeeecc
Q 018675 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGV-DGVAPVFASCSG----------DKTVRIWEQSAS-SRFWNCKAVLEEM 72 (352)
Q Consensus 5 ~~~~~~~~~~~~~~gH~~~V~~i~~~p~~~~-~~~~~~l~s~s~----------D~~v~~w~~~~~-~~~~~~~~~~~~~ 72 (352)
+..++.......|.. .+.+++++...-... ....++++.|.. .|.+.++++... ....+.+......
T Consensus 8 d~~~~~~~~~~~l~~-~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~ 86 (321)
T PF03178_consen 8 DPTTFEVLDSFELEP-NEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTE 86 (321)
T ss_dssp ETTTSSEEEEEEEET-TEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEE
T ss_pred eCCCCeEEEEEECCC-CceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEe
Confidence 444444333344543 345555544331110 011356766632 288999998763 2112333333344
Q ss_pred eecceEEEEECCCCCEEEEEeCCCcEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
.+++|+++.-- +++ |+.+ ..+.+.+|+....+ .........+ ..+.++.. .+++++.|.....+.++......
T Consensus 87 ~~g~V~ai~~~-~~~-lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~-~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~ 160 (321)
T PF03178_consen 87 VKGPVTAICSF-NGR-LVVA-VGNKLYVYDLDNSKTLLKKAFYDSP-FYITSLSV--FKNYILVGDAMKSVSLLRYDEEN 160 (321)
T ss_dssp ESS-EEEEEEE-TTE-EEEE-ETTEEEEEEEETTSSEEEEEEE-BS-SSEEEEEE--ETTEEEEEESSSSEEEEEEETTT
T ss_pred ecCcceEhhhh-CCE-EEEe-ecCEEEEEEccCcccchhhheecce-EEEEEEec--cccEEEEEEcccCEEEEEEEccC
Confidence 57889888655 455 4433 34889999987766 4444444322 24555544 45688889888888887554332
Q ss_pred e-eEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC--Cce-eEeeeeccCCCCcccEEEE---EEcC
Q 018675 152 E-FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD--NWH-CVQTISESNNGHSSTIWAL---SFNA 224 (352)
Q Consensus 152 ~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~--~~~-~~~~~~~~~~~h~~~i~~l---~~~~ 224 (352)
. ...+.. ......++++.+-++++.++.+..+|.+.++........ ... .+...... -.+..|+++ ++.|
T Consensus 161 ~~l~~va~-d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f--~lg~~v~~~~~~~l~~ 237 (321)
T PF03178_consen 161 NKLILVAR-DYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSF--HLGDIVNSFRRGSLIP 237 (321)
T ss_dssp E-EEEEEE-ESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEE--E-SS-EEEEEE--SS-
T ss_pred CEEEEEEe-cCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEE--ECCCccceEEEEEeee
Confidence 2 332222 223445788888866678999999999999865432111 111 11111111 123567666 4445
Q ss_pred C--CC------EEEEEeCCCcEEEE
Q 018675 225 K--GD------KLVSCSDDLTIKIW 241 (352)
Q Consensus 225 ~--~~------~l~s~~~dg~i~iw 241 (352)
. +. .++-++.+|.|-..
T Consensus 238 ~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 238 RSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp -SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred cCCCCcccccceEEEEecCCEEEEE
Confidence 2 22 37777888888744
No 320
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.66 E-value=0.00017 Score=40.39 Aligned_cols=38 Identities=39% Similarity=0.713 Sum_probs=32.6
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEe
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE 55 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~ 55 (352)
..+..+.+|...|+++.|.|. ..++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPD------GKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCC------CCEEEEecCCCeEEEcC
Confidence 345677789999999999986 36899999999999995
No 321
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.62 E-value=0.005 Score=53.38 Aligned_cols=77 Identities=18% Similarity=0.236 Sum_probs=61.4
Q ss_pred ceecceEEEEECCCCC-EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCC
Q 018675 72 MHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~ 149 (352)
.|...|+.++|||..+ ++..++-+.+|+|.|..+. .++.....+ ..+++++|..+. +++++|-..|.|.++|++.
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~--~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETS--CVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred ccchhhhhhccCccccceeeeeccCceEEEEecccc--eeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 4667899999999877 6788999999999998765 334444455 789999998754 5688888999999999975
Q ss_pred CC
Q 018675 150 GN 151 (352)
Q Consensus 150 ~~ 151 (352)
..
T Consensus 268 ~~ 269 (463)
T KOG1645|consen 268 PE 269 (463)
T ss_pred CC
Confidence 43
No 322
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.62 E-value=0.048 Score=49.17 Aligned_cols=261 Identities=11% Similarity=0.126 Sum_probs=130.9
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
+..++.++.|+.+..+|..+++..|+.... ..+.+.-.- .+..++.+..++.+..+|..+++. +-......
T Consensus 105 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~------~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~--~W~~~~~~ 175 (377)
T TIGR03300 105 GGLVFVGTEKGEVIALDAEDGKELWRAKLS------SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGER--LWTYSRVT 175 (377)
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeeeeccC------ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCce--eeEEccCC
Confidence 356777788999999999888877754321 111111001 245666677889999999877643 22221111
Q ss_pred CCeeEEE-E-CC--CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec--Cc--cCeeEEEEcC--CCCEEEEEeCCCcEE
Q 018675 119 NEVKSVS-W-NA--SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG--HA--QDVKMVQWHP--TMDVLFSCSYDNTIK 188 (352)
Q Consensus 119 ~~v~~v~-~-~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--h~--~~v~~~~~~~--~~~~l~s~~~d~~i~ 188 (352)
....+. . +| .+..++.+..++.+..+|...+...-....... .. .....+.-+| .+..++.++.++.+.
T Consensus 176 -~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~ 254 (377)
T TIGR03300 176 -PALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVA 254 (377)
T ss_pred -CceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEE
Confidence 110000 0 01 124667777888999999876643211110000 00 0000000111 245677888899999
Q ss_pred EEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccC
Q 018675 189 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHD 268 (352)
Q Consensus 189 iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (352)
.++..... ..|. .. ..... ... ..+..+..++.||.+..+|....+. .|+... +. .
T Consensus 255 a~d~~tG~-~~W~----~~--~~~~~----~p~--~~~~~vyv~~~~G~l~~~d~~tG~~-------~W~~~~-~~---~ 310 (377)
T TIGR03300 255 ALDLRSGR-VLWK----RD--ASSYQ----GPA--VDDNRLYVTDADGVVVALDRRSGSE-------LWKNDE-LK---Y 310 (377)
T ss_pred EEECCCCc-EEEe----ec--cCCcc----Cce--EeCCEEEEECCCCeEEEEECCCCcE-------EEcccc-cc---C
Confidence 99875431 1121 11 00111 111 2356777788899999998753221 122100 00 0
Q ss_pred cceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCccee-EEEecCCCcceEEEecCCCeEEEE
Q 018675 269 RTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVN-SVQWSPGERRLLASASDDGMIKIW 346 (352)
Q Consensus 269 ~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~-~~~~sp~~~~~l~s~~~Dg~i~iw 346 (352)
....+... .++.++.++.+|.+++++.....+ +.+...+...+. .-.+ .++ .++ .++.||.|..|
T Consensus 311 ~~~ssp~i-~g~~l~~~~~~G~l~~~d~~tG~~---------~~~~~~~~~~~~~sp~~-~~~-~l~-v~~~dG~l~~~ 376 (377)
T TIGR03300 311 RQLTAPAV-VGGYLVVGDFEGYLHWLSREDGSF---------VARLKTDGSGIASPPVV-VGD-GLL-VQTRDGDLYAF 376 (377)
T ss_pred CccccCEE-ECCEEEEEeCCCEEEEEECCCCCE---------EEEEEcCCCccccCCEE-ECC-EEE-EEeCCceEEEe
Confidence 00111111 245788888999999886543222 112222222222 2223 234 344 58889988765
No 323
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.60 E-value=0.00023 Score=39.76 Aligned_cols=36 Identities=33% Similarity=0.710 Sum_probs=31.6
Q ss_pred eEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEe
Q 018675 111 VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146 (352)
Q Consensus 111 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd 146 (352)
...+..|...|+++.|++.+..+++++.|+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 445567888999999999889999999999999996
No 324
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.52 E-value=0.02 Score=53.40 Aligned_cols=107 Identities=15% Similarity=0.107 Sum_probs=76.8
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCc-eeeeEe--e-
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVAT--L- 114 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~-~~~~~~--~- 114 (352)
.++++-|+.-|.+.+|+...+..... +. ..-.+.+..+.++++..++|.|+..|.|.++-..... ...... .
T Consensus 45 ~~~l~~GsS~G~lyl~~R~~~~~~~~-~~---~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d 120 (726)
T KOG3621|consen 45 EEYLAMGSSAGSVYLYNRHTGEMRKL-KN---EGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCD 120 (726)
T ss_pred CceEEEecccceEEEEecCchhhhcc-cc---cCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeecccc
Confidence 47899999999999999876643211 11 1123556677889999999999999999888543311 111111 1
Q ss_pred ccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC
Q 018675 115 EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 115 ~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~ 149 (352)
+.|...|+|++|++++..+++|...|+|.+-.+..
T Consensus 121 ~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 121 KSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 23677899999999999999999999998877643
No 325
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.35 E-value=0.01 Score=51.55 Aligned_cols=81 Identities=12% Similarity=0.210 Sum_probs=63.6
Q ss_pred EeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC-EEEEEeCCCcEEE
Q 018675 112 ATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VLFSCSYDNTIKV 189 (352)
Q Consensus 112 ~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~i 189 (352)
.-+.+|...|+.++|+|..+ ++..++.+++|++.|+... .++..+..+ ..+++++|.-++. ++..|-..|.|.+
T Consensus 187 q~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~---~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~Vlv 262 (463)
T KOG1645|consen 187 QILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETS---CVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLV 262 (463)
T ss_pred hcccccchhhhhhccCccccceeeeeccCceEEEEecccc---eeeeheecc-CCceeeeeccCCcceeEEeccCceEEE
Confidence 34556778899999999877 7889999999999998643 234555556 5799999987655 5677888999999
Q ss_pred EecCCCC
Q 018675 190 WWAEDTD 196 (352)
Q Consensus 190 w~~~~~~ 196 (352)
||++.+.
T Consensus 263 yD~R~~~ 269 (463)
T KOG1645|consen 263 YDMRQPE 269 (463)
T ss_pred EEccCCC
Confidence 9987753
No 326
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.30 E-value=0.079 Score=44.35 Aligned_cols=204 Identities=13% Similarity=0.162 Sum_probs=100.5
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
...+.|=.+.+++++|.|+. +.+++.....+.|.-.+.+ ++ +.... .+.. .+-.-.+++..++.++++--
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~-----~tLfaV~d~~~~i~els~~-G~-vlr~i-~l~g--~~D~EgI~y~g~~~~vl~~E 83 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDT-----GTLFAVQDEPGEIYELSLD-GK-VLRRI-PLDG--FGDYEGITYLGNGRYVLSEE 83 (248)
T ss_dssp EEE-TT--S-EEEEEEETTT-----TEEEEEETTTTEEEEEETT----EEEEE-E-SS---SSEEEEEE-STTEEEEEET
T ss_pred eeECCCccCCccccEEcCCC-----CeEEEEECCCCEEEEEcCC-CC-EEEEE-eCCC--CCCceeEEEECCCEEEEEEc
Confidence 45677777789999999975 3466665566666555543 22 22211 1111 23456777777777777665
Q ss_pred CCCcEEEEEccCC--ce--eeeE--ee---ccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC---CCeeEEEEEee-
Q 018675 94 FDATTCIWEDVGG--DY--ECVA--TL---EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP---GNEFECVSVLQ- 160 (352)
Q Consensus 94 ~d~~i~i~~~~~~--~~--~~~~--~~---~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~---~~~~~~~~~~~- 160 (352)
.++.+.+++.... .. .... .+ ..++..+..++|.|.++.|+.+-+.....++.+.. ...... ....
T Consensus 84 r~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~-~~~~~ 162 (248)
T PF06977_consen 84 RDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFV-SDDQD 162 (248)
T ss_dssp TTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EE-EE-HH
T ss_pred CCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceee-ccccc
Confidence 5888887776221 11 1111 11 13456789999999888888888877777777653 111111 1111
Q ss_pred -----cCccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCC---CcccEEEEEEcCCCCEEEE
Q 018675 161 -----GHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNG---HSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 161 -----~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~---h~~~i~~l~~~~~~~~l~s 231 (352)
.....+..+.++|.. .+++.....+.+..+|.... ......+.....+ .-...-.|+|.++|++.++
T Consensus 163 ~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~----~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv 238 (248)
T PF06977_consen 163 LDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQGR----VVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV 238 (248)
T ss_dssp HH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT------EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE
T ss_pred cccccceeccccceEEcCCCCeEEEEECCCCeEEEECCCCC----EEEEEEeCCcccCcccccCCccEEEECCCCCEEEE
Confidence 123456688899864 45556666777877763221 1111222211100 1134557899999987766
Q ss_pred E
Q 018675 232 C 232 (352)
Q Consensus 232 ~ 232 (352)
+
T Consensus 239 s 239 (248)
T PF06977_consen 239 S 239 (248)
T ss_dssp E
T ss_pred c
Confidence 5
No 327
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.29 E-value=0.0019 Score=59.07 Aligned_cols=74 Identities=23% Similarity=0.376 Sum_probs=62.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCee-EEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVK-SVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~-~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
-.+.-+.|+|...++|.+..+|.+.++... ++.+.++.-|...++ +++|.|+|++|+.|-.||+|++.|+..+.
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n---~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN---WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec---cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 346678899999999999999999888653 345666666777777 99999999999999999999999987654
No 328
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.28 E-value=0.00096 Score=61.67 Aligned_cols=121 Identities=14% Similarity=0.131 Sum_probs=85.5
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
.+...|.--+++..+++++.|+.-|.+.+|.-.++... ...-.+-.+.+..++.+++..++|.|+..+.|.++.++...
T Consensus 31 ~~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~-~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~ 109 (726)
T KOG3621|consen 31 FFPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMR-KLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKEL 109 (726)
T ss_pred cCcceEEEEEeecCCceEEEecccceEEEEecCchhhh-cccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccC
Confidence 34555655567888999999999999999975544322 22222334556667778888888889999999888876533
Q ss_pred eeEE--EEE-eecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecC
Q 018675 152 EFEC--VSV-LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193 (352)
Q Consensus 152 ~~~~--~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~ 193 (352)
+... +.. -+.|...|+++.|++++..+++|...|.|.+-.+.
T Consensus 110 p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~ 154 (726)
T KOG3621|consen 110 PRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELD 154 (726)
T ss_pred CCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEec
Confidence 2221 111 22367889999999999999999999988766443
No 329
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=97.27 E-value=0.00033 Score=66.30 Aligned_cols=156 Identities=15% Similarity=0.154 Sum_probs=100.4
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee-CCC-cEEEEecCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG-RDK-SVWIWEVMP 149 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~-~v~vwd~~~ 149 (352)
.|+..-+|++|+.+.+.|+.|+..|.|++|+..+|.. .....+|+++|+-+.=+.+|..+++.+ ... -..+|++..
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~--e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSM--EESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS 1176 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCccc--cccccccccccccccccCCcceeeeeccccCchHHHhcccc
Confidence 3667889999999999999999999999999887643 456689999999998788888765544 333 456899753
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
.....+.+ ..-.++.|+..-..-+.|.......+||+..... ++++.....+....=+...|+|..+++
T Consensus 1177 --~~~~~Hsf----~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~-----l~tylt~~~~~~y~~n~a~FsP~D~LI 1245 (1516)
T KOG1832|consen 1177 --TGGPRHSF----DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSP-----LQTYLTDTVTSSYSNNLAHFSPCDTLI 1245 (1516)
T ss_pred --ccCccccc----cccceeehhhhHHHHHhcccccceEEEecccCcH-----HHHhcCcchhhhhhccccccCCCcceE
Confidence 22233333 2445677776533333444445677897754321 122111111222233567899988876
Q ss_pred EEEeCCCcEEEEcCCc
Q 018675 230 VSCSDDLTIKIWGADI 245 (352)
Q Consensus 230 ~s~~~dg~i~iwd~~~ 245 (352)
+ .|| .+||.+.
T Consensus 1246 l---ndG--vLWDvR~ 1256 (1516)
T KOG1832|consen 1246 L---NDG--VLWDVRI 1256 (1516)
T ss_pred e---eCc--eeeeecc
Confidence 5 455 4588764
No 330
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.15 E-value=0.12 Score=43.44 Aligned_cols=188 Identities=10% Similarity=0.078 Sum_probs=102.1
Q ss_pred eEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC--------
Q 018675 24 VWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD-------- 95 (352)
Q Consensus 24 V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-------- 95 (352)
..++.+.+.+ ..|+.+..++ +.+++..+++.................+.+++.|+|++.++....
T Consensus 42 ~~G~~~~~~~------g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~ 114 (246)
T PF08450_consen 42 PNGMAFDRPD------GRLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDP 114 (246)
T ss_dssp EEEEEEECTT------SEEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGS
T ss_pred CceEEEEccC------CEEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccc
Confidence 4456666322 2445544544 445587765321111110001123567899999999988876644
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCCCcEEEEecCCCCe-eEEEEEe---ecCccCeeEEE
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKSVWIWEVMPGNE-FECVSVL---QGHAQDVKMVQ 170 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~v~vwd~~~~~~-~~~~~~~---~~h~~~v~~~~ 170 (352)
+.+..++.. ++.. .+...-...+.++|+|+++.|+ +-+..+.|..+++..... ......+ .......-.++
T Consensus 115 g~v~~~~~~-~~~~---~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~ 190 (246)
T PF08450_consen 115 GSVYRIDPD-GKVT---VVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLA 190 (246)
T ss_dssp EEEEEEETT-SEEE---EEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEE
T ss_pred cceEEECCC-CeEE---EEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcce
Confidence 334444433 2222 2222245578999999998665 566778888888753322 2222222 11111256788
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc-CCCC-EEEEE
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN-AKGD-KLVSC 232 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~-~~~~-~l~s~ 232 (352)
+..++.+.++....+.|.+++.... .+..+.. . ...+.+++|. ++.+ +++|.
T Consensus 191 vD~~G~l~va~~~~~~I~~~~p~G~------~~~~i~~---p-~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 191 VDSDGNLWVADWGGGRIVVFDPDGK------LLREIEL---P-VPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EBTTS-EEEEEETTTEEEEEETTSC------EEEEEE----S-SSSEEEEEEESTTSSEEEEEE
T ss_pred EcCCCCEEEEEcCCCEEEEECCCcc------EEEEEcC---C-CCCEEEEEEECCCCCEEEEEe
Confidence 9999988777778889999975421 2222221 1 2468899994 5544 44443
No 331
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.0028 Score=57.98 Aligned_cols=74 Identities=24% Similarity=0.435 Sum_probs=57.3
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceE-EEEECCCCCEEEEEeCCCcEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR-SCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~i~i 100 (352)
-.|.-+.|+|. .+++|++-.+|.|.+.... -.++|..+ .|...++ +++|.|||+.||.|-.||+|++
T Consensus 21 ~~i~~~ewnP~------~dLiA~~t~~gelli~R~n-~qRlwtip-----~p~~~v~~sL~W~~DGkllaVg~kdG~I~L 88 (665)
T KOG4640|consen 21 INIKRIEWNPK------MDLIATRTEKGELLIHRLN-WQRLWTIP-----IPGENVTASLCWRPDGKLLAVGFKDGTIRL 88 (665)
T ss_pred cceEEEEEcCc------cchhheeccCCcEEEEEec-cceeEecc-----CCCCccceeeeecCCCCEEEEEecCCeEEE
Confidence 35667899997 4789999999988887655 33445432 1445566 9999999999999999999999
Q ss_pred EEccCCc
Q 018675 101 WEDVGGD 107 (352)
Q Consensus 101 ~~~~~~~ 107 (352)
.|...+.
T Consensus 89 ~Dve~~~ 95 (665)
T KOG4640|consen 89 HDVEKGG 95 (665)
T ss_pred EEccCCC
Confidence 9987654
No 332
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.14 E-value=0.031 Score=39.87 Aligned_cols=101 Identities=20% Similarity=0.277 Sum_probs=61.6
Q ss_pred EEEEEEc---CCC-CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEE
Q 018675 217 IWALSFN---AKG-DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQ 292 (352)
Q Consensus 217 i~~l~~~---~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~ 292 (352)
|.+|++. .+| +.|+.|+.|..||+|+-+. ....+ .....+.++.....+.++.+..+|+|.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e-------------~~~Ei--~e~~~v~~L~~~~~~~F~Y~l~NGTVG 66 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE-------------IVAEI--TETDKVTSLCSLGGGRFAYALANGTVG 66 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc-------------EEEEE--ecccceEEEEEcCCCEEEEEecCCEEE
Confidence 4455543 343 5799999999999996431 11111 123456777777778899999999999
Q ss_pred EEEccCCccccCcccceeeecccccCcceeEEEe---cCCCcceEEEecCCCeEE
Q 018675 293 FFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW---SPGERRLLASASDDGMIK 344 (352)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~---sp~~~~~l~s~~~Dg~i~ 344 (352)
+|.... ..+ .+. ..| .++++.+ .-||..-|++|=.+|.|-
T Consensus 67 vY~~~~------RlW-RiK---SK~--~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 67 VYDRSQ------RLW-RIK---SKN--QVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EEeCcc------eee-eec---cCC--CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 995432 111 111 122 2555544 345555677888888774
No 333
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.12 E-value=0.14 Score=43.81 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=61.6
Q ss_pred EEEEECC-CCCEEEEEeCCCc-EEEEEccCCceeeeEeeccccCCee--EEEECCCCcEEEEe-----eCCCcEEEEecC
Q 018675 78 RSCAWSP-SGKLLATASFDAT-TCIWEDVGGDYECVATLEGHENEVK--SVSWNASGTLLATC-----GRDKSVWIWEVM 148 (352)
Q Consensus 78 ~~~~~s~-~~~~l~s~~~d~~-i~i~~~~~~~~~~~~~~~~h~~~v~--~v~~~~~~~~l~s~-----~~d~~v~vwd~~ 148 (352)
..++.+| .+..++.+---|+ ..+||..++... ..+....+.-. --.|+++|++|++. ...|.|-|||..
T Consensus 8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~--~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLL--QRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCcee--eEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 4566777 4455566655554 446777666432 22222112111 24689999999886 345789999986
Q ss_pred CCCeeEEEEEeecCccCeeEEEEcCCCCEEEEE
Q 018675 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181 (352)
Q Consensus 149 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 181 (352)
..+..+..+..|--.--.+.+.|+++.|+.+
T Consensus 86 --~~~~ri~E~~s~GIGPHel~l~pDG~tLvVA 116 (305)
T PF07433_consen 86 --RGYRRIGEFPSHGIGPHELLLMPDGETLVVA 116 (305)
T ss_pred --CCcEEEeEecCCCcChhhEEEcCCCCEEEEE
Confidence 3345566666655445567789999777765
No 334
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.98 E-value=0.17 Score=42.36 Aligned_cols=168 Identities=11% Similarity=0.179 Sum_probs=89.8
Q ss_pred cceEEEEECCCCCEE-EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe-
Q 018675 75 RTVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE- 152 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l-~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~- 152 (352)
..+..++|+|+.+.| ++....+.|..++. .++......+.+ .+....|.+..++.++++.-.++.+.+.++.....
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~ 99 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTS 99 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccc
Confidence 348999999986655 45555566655554 444433334444 35677888887777666655688898888732211
Q ss_pred --eE---EEE--EeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCC-CCceeEeeee-ccCCCCcccEEEEEEc
Q 018675 153 --FE---CVS--VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-DNWHCVQTIS-ESNNGHSSTIWALSFN 223 (352)
Q Consensus 153 --~~---~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~-~~~~~h~~~i~~l~~~ 223 (352)
.. .+. ....+...+-.++|.|....|+.+-+..-..+|.+..... .......... .........+.+++++
T Consensus 100 ~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~ 179 (248)
T PF06977_consen 100 LDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYD 179 (248)
T ss_dssp --EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEE
T ss_pred cchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEc
Confidence 11 111 1112445678999999888888887777677776543110 0111000000 0012234567889999
Q ss_pred CC-CCEEEEEeCCCcEEEEcCC
Q 018675 224 AK-GDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 224 ~~-~~~l~s~~~dg~i~iwd~~ 244 (352)
|. +.+++.+..+..|..+|.+
T Consensus 180 p~t~~lliLS~es~~l~~~d~~ 201 (248)
T PF06977_consen 180 PRTGHLLILSDESRLLLELDRQ 201 (248)
T ss_dssp TTTTEEEEEETTTTEEEEE-TT
T ss_pred CCCCeEEEEECCCCeEEEECCC
Confidence 96 6677778888888888853
No 335
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.88 E-value=0.091 Score=37.54 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=61.1
Q ss_pred ECCCC-CEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEee
Q 018675 82 WSPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160 (352)
Q Consensus 82 ~s~~~-~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 160 (352)
|.-|| ..|++|+.|..|++|+.. ..+..+.. .+.|.++.-... ..|+.+-.+|+|-+|+-. .+ +...+
T Consensus 10 ~d~dg~~eLlvGs~D~~IRvf~~~----e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~-~R----lWRiK 78 (111)
T PF14783_consen 10 FDGDGENELLVGSDDFEIRVFKGD----EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRS-QR----LWRIK 78 (111)
T ss_pred cCCCCcceEEEecCCcEEEEEeCC----cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCc-ce----eeeec
Confidence 34444 579999999999999743 23445543 467777775554 668889999999999842 11 22222
Q ss_pred cCccCeeEEEEcC-CC---CEEEEEeCCCcEEE
Q 018675 161 GHAQDVKMVQWHP-TM---DVLFSCSYDNTIKV 189 (352)
Q Consensus 161 ~h~~~v~~~~~~~-~~---~~l~s~~~d~~i~i 189 (352)
.. ..++++.+.. ++ ..|++|..+|.|-+
T Consensus 79 SK-~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 79 SK-NQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred cC-CCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 22 2355655432 22 25888888887643
No 336
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.87 E-value=0.36 Score=44.27 Aligned_cols=228 Identities=16% Similarity=0.199 Sum_probs=102.9
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 154 (352)
-....++++|+|+.++.+ .||...||...... .. ..+.-..+.|.+. +.+|.-...++|.++.-.......
T Consensus 33 ~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r--~k-----~~G~g~~~vw~~~-n~yAv~~~~~~I~I~kn~~~~~~k 103 (443)
T PF04053_consen 33 IYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWR--NK-----AFGSGLSFVWSSR-NRYAVLESSSTIKIYKNFKNEVVK 103 (443)
T ss_dssp S--SEEEE-TTSSEEEEE-ETTEEEEEETTTTE--EE-----EEEE-SEEEE-TS-SEEEEE-TTS-EEEEETTEE-TT-
T ss_pred cCCeeEEECCCCCEEEEE-cCCEEEEEEccCCc--cc-----ccCceeEEEEecC-ccEEEEECCCeEEEEEcCccccce
Confidence 346889999999999884 56777777633221 11 1234567889884 456667668889996422111101
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~ 234 (352)
. +.. +...-...+ |.+|+..+.+ .|.+||.... ..+..+. -.+|..+-|++++++++-.+.
T Consensus 104 ~---i~~---~~~~~~If~-G~LL~~~~~~-~i~~yDw~~~-----~~i~~i~------v~~vk~V~Ws~~g~~val~t~ 164 (443)
T PF04053_consen 104 S---IKL---PFSVEKIFG-GNLLGVKSSD-FICFYDWETG-----KLIRRID------VSAVKYVIWSDDGELVALVTK 164 (443)
T ss_dssp ----------SS-EEEEE--SSSEEEEETT-EEEEE-TTT-------EEEEES------S-E-EEEEE-TTSSEEEEE-S
T ss_pred E---EcC---CcccceEEc-CcEEEEECCC-CEEEEEhhHc-----ceeeEEe------cCCCcEEEEECCCCEEEEEeC
Confidence 1 110 111112222 6666666544 7999976543 2333332 234889999999999988875
Q ss_pred CCcEEEEcCCccc--cccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeee
Q 018675 235 DLTIKIWGADITR--MQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 312 (352)
Q Consensus 235 dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 312 (352)
+ .+.|.+.+... ....++... ..+.+. .-...|.+..|..+-++.+-.. .++++..... .++.
T Consensus 165 ~-~i~il~~~~~~~~~~~~~g~e~--~f~~~~-E~~~~IkSg~W~~d~fiYtT~~--~lkYl~~Ge~---------~~i~ 229 (443)
T PF04053_consen 165 D-SIYILKYNLEAVAAIPEEGVED--AFELIH-EISERIKSGCWVEDCFIYTTSN--HLKYLVNGET---------GIIA 229 (443)
T ss_dssp --SEEEEEE-HHHHHHBTTTB-GG--GEEEEE-EE-S--SEEEEETTEEEEE-TT--EEEEEETTEE---------EEEE
T ss_pred C-eEEEEEecchhcccccccCchh--ceEEEE-EecceeEEEEEEcCEEEEEcCC--eEEEEEcCCc---------ceEE
Confidence 5 67777654321 111222221 111111 1134567777776633333332 4554322110 1111
Q ss_pred cccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 313 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 313 ~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
. -..++.=+...|...+++ ....|+.+..+.+.
T Consensus 230 ~---ld~~~yllgy~~~~~~ly-~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 230 H---LDKPLYLLGYLPKENRLY-LIDRDGNVISYELD 262 (443)
T ss_dssp E----SS--EEEEEETTTTEEE-EE-TT--EEEEE--
T ss_pred E---cCCceEEEEEEccCCEEE-EEECCCCEEEEEEC
Confidence 1 123444455556444443 56677777777654
No 337
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.80 E-value=0.26 Score=41.68 Aligned_cols=157 Identities=16% Similarity=0.119 Sum_probs=86.6
Q ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEe-cCCCCee
Q 018675 76 TVRSCAWSPSGKLLATAS-FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE-VMPGNEF 153 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~-~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd-~~~~~~~ 153 (352)
.+.+.+++++|+.++... .++.-.+|-...+. .....+.+ ..+..-+|.+++...+....+...+++. ...+. .
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~-~~~~~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~-~ 100 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG-PVRPVLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGT-G 100 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC-cceeeccC--CccccccccCCCCEEEEEcCCCceEEEEecCCCc-c
Confidence 578889999999877655 23333333322221 11122222 3677889999987776666666666663 22221 1
Q ss_pred EEEEE-eecCccCeeEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 154 ECVSV-LQGHAQDVKMVQWHPTMDVLFSCS---YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 154 ~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
..... ...-...|..++++||+..++... .++.+.+--+.......-..+.............+.++.|.+++.++
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~ 180 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLV 180 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEE
Confidence 11111 111111799999999999876554 34666665443322220111111111112234678899999999887
Q ss_pred EEEeCCC
Q 018675 230 VSCSDDL 236 (352)
Q Consensus 230 ~s~~~dg 236 (352)
+.+...+
T Consensus 181 V~~~~~~ 187 (253)
T PF10647_consen 181 VLGRSAG 187 (253)
T ss_pred EEeCCCC
Confidence 7665433
No 338
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=96.76 E-value=0.42 Score=43.58 Aligned_cols=31 Identities=13% Similarity=0.237 Sum_probs=27.2
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
+++..++.||+++++|.-..+|.+.+.+.+.
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf 247 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDF 247 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcc
Confidence 5799999999999999999999998886553
No 339
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.75 E-value=0.26 Score=40.99 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=78.4
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEEC
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN 127 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~ 127 (352)
+++|..||..+++.+|+... .......+ +. ..+++..+.+++.++.+..||..+++..-...+ .+.+...- .
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~--~~~~~~~~-~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~---~~~~~~~~-~ 73 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDL--GPGIGGPV-AT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL---PGPISGAP-V 73 (238)
T ss_dssp TSEEEEEETTTTEEEEEEEC--SSSCSSEE-ET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEEC---SSCGGSGE-E
T ss_pred CCEEEEEECCCCCEEEEEEC--CCCCCCcc-ce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec---ccccccee-e
Confidence 68899999988888887532 11111111 11 222566677778999999999877754322222 22221111 1
Q ss_pred CCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc--cC-eeEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q 018675 128 ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA--QD-VKMVQWHPTMDVLFSCSYDNTIKVWWAEDT 195 (352)
Q Consensus 128 ~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~--~~-v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 195 (352)
..+..++.+..|+.+..+|...++..-.. ..... .. .........+..++.+..++.+..+|....
T Consensus 74 ~~~~~v~v~~~~~~l~~~d~~tG~~~W~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG 142 (238)
T PF13360_consen 74 VDGGRVYVGTSDGSLYALDAKTGKVLWSI--YLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTG 142 (238)
T ss_dssp EETTEEEEEETTSEEEEEETTTSCEEEEE--EE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTT
T ss_pred ecccccccccceeeeEecccCCcceeeee--ccccccccccccccCceEecCEEEEEeccCcEEEEecCCC
Confidence 23455666778889999998777643221 11111 11 111222223677888888999999976543
No 340
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.49 E-value=0.61 Score=44.11 Aligned_cols=119 Identities=5% Similarity=-0.074 Sum_probs=63.4
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCCcccccc
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQS 250 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~ 250 (352)
.+++++... .++.|.+.|..............+.. ......+.++|||++++.+ ..++++.|.|+...+...
T Consensus 285 vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPV-----GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~ 357 (635)
T PRK02888 285 VKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPV-----PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLF 357 (635)
T ss_pred hhCCCEEEE--CCCEEEEEECCccccCCcceEEEEEC-----CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhh
Confidence 346665554 35778888765411111222333332 2345568999999987755 568999999986433211
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
...+. .+..-.-...-........|++++ .+.+..-|..+..|....
T Consensus 358 ~~~~~-~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 358 DGKIK-PRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hccCC-ccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 11110 000000001112334445666665 455666788888887543
No 341
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.48 E-value=0.57 Score=41.56 Aligned_cols=71 Identities=7% Similarity=-0.030 Sum_probs=34.3
Q ss_pred cEEEEeeCCCeEEEE--ecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec
Q 018675 40 PVFASCSGDKTVRIW--EQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE 115 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w--~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~ 115 (352)
++|+.+..|+.-.+| |+.+++. .+...... .......++|+.+.+.-......+.-.|..+.+...+..+.
T Consensus 49 kllF~s~~dg~~nly~lDL~t~~i----~QLTdg~g-~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 49 KLLFASDFDGNRNLYLLDLATGEI----TQLTDGPG-DNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp EEEEEE-TTSS-EEEEEETTT-EE----EE---SS--B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred EEEEEeccCCCcceEEEEcccCEE----EECccCCC-CCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence 677777778877777 5555432 22221111 11223456788887766555567777777776655555443
No 342
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.41 E-value=0.17 Score=49.37 Aligned_cols=134 Identities=10% Similarity=0.060 Sum_probs=84.8
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCC-eeEEEECCC-------CcEEEEeeCCCcEEEEecCCCCeeEEEE-E--eecC
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENE-VKSVSWNAS-------GTLLATCGRDKSVWIWEVMPGNEFECVS-V--LQGH 162 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~-------~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~--~~~h 162 (352)
....+.-.|...++ .+..++.|... |..+ .|+ ....+.|-.++.+..||.+.... +++. . ....
T Consensus 502 ~~~~ly~mDLe~GK--VV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~-k~v~~~~k~Y~~ 576 (794)
T PF08553_consen 502 NPNKLYKMDLERGK--VVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGN-KLVDSQSKQYSS 576 (794)
T ss_pred CCCceEEEecCCCc--EEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCC-ceeecccccccc
Confidence 34566666777774 35555555543 5444 342 33455677778899999876432 2221 1 1123
Q ss_pred ccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 163 AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 163 ~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
.....|++-..+| ++|.|+.+|.||+|+-.... .++ ...+.+.+|..|+.+.||+++++.+ +..+.+++
T Consensus 577 ~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~------AKT---~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~ 645 (794)
T PF08553_consen 577 KNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKR------AKT---ALPGLGDPIIGIDVTADGKWILATC-KTYLLLID 645 (794)
T ss_pred CCCceEEEecCCc-eEEEEeCCCcEEeecccchh------hhh---cCCCCCCCeeEEEecCCCcEEEEee-cceEEEEE
Confidence 3456777776666 68999999999999632211 112 2236679999999999999887665 45677776
Q ss_pred C
Q 018675 243 A 243 (352)
Q Consensus 243 ~ 243 (352)
.
T Consensus 646 t 646 (794)
T PF08553_consen 646 T 646 (794)
T ss_pred E
Confidence 5
No 343
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.40 E-value=0.71 Score=41.73 Aligned_cols=205 Identities=12% Similarity=0.139 Sum_probs=107.9
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceee---------------------------------------
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW--------------------------------------- 63 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~--------------------------------------- 63 (352)
.|+.+.|.+.. ..|+.+-..|.|-||.+..++...
T Consensus 3 ~v~~vs~a~~t------~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf 76 (395)
T PF08596_consen 3 SVTHVSFAPET------LELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGF 76 (395)
T ss_dssp -EEEEEEETTT------TEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEE
T ss_pred eEEEEEecCCC------ceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCccccccc
Confidence 57888898863 468888899999998754332110
Q ss_pred eeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecc------ccCCeeEEEEC-----CCC--
Q 018675 64 NCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG------HENEVKSVSWN-----ASG-- 130 (352)
Q Consensus 64 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~------h~~~v~~v~~~-----~~~-- 130 (352)
.+...+ ....++|++++.| |=.++|.|..+|.+.|.|.++........+.. ....|+++.|. .++
T Consensus 77 ~P~~l~-~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 77 LPLTLL-DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp EEEEEE----S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred Cchhhe-eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCccc
Confidence 000111 1246789999987 66789999999999999986654433333333 23468888885 122
Q ss_pred -cEEEEeeCCCcEEEEecCCC--CeeE--EEEEeecCccCeeEEE-EcCC--------------------CCEEEEEeCC
Q 018675 131 -TLLATCGRDKSVWIWEVMPG--NEFE--CVSVLQGHAQDVKMVQ-WHPT--------------------MDVLFSCSYD 184 (352)
Q Consensus 131 -~~l~s~~~d~~v~vwd~~~~--~~~~--~~~~~~~h~~~v~~~~-~~~~--------------------~~~l~s~~~d 184 (352)
-.++.|...|.+.+|.+.+. ..+. .......+...+..+. +..+ .+.++....+
T Consensus 155 Si~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe 234 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSE 234 (395)
T ss_dssp EEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-S
T ss_pred ceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcc
Confidence 36888889999999988632 1111 1112223334444332 2110 1234455567
Q ss_pred CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEE-----cCCCCEEEEEeCCCcEEEEcCC
Q 018675 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF-----NAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 185 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~-----~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
..++++..... +..+.... ......++.+ ...+..|++-..+|.++++.+.
T Consensus 235 ~~irv~~~~~~-----k~~~K~~~----~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP 290 (395)
T PF08596_consen 235 SDIRVFKPPKS-----KGAHKSFD----DPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLP 290 (395)
T ss_dssp SEEEEE-TT--------EEEEE-S----S-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETT
T ss_pred cceEEEeCCCC-----cccceeec----cccccceEEEEeecccCCceEEEEEECCCcEEEEECC
Confidence 78899854332 11111110 1112223333 2345668888899999999864
No 344
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.34 E-value=0.43 Score=45.38 Aligned_cols=109 Identities=15% Similarity=0.330 Sum_probs=70.6
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEEC--CCCcEEEEeeCCCcEEEEecC------CCC
Q 018675 80 CAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN--ASGTLLATCGRDKSVWIWEVM------PGN 151 (352)
Q Consensus 80 ~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~~~d~~v~vwd~~------~~~ 151 (352)
+.-|.-++..++-+....+.|||...+..+....+ ...+.|..+.|. |+++.+++.|..+.|.++.-. .++
T Consensus 35 i~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p 113 (631)
T PF12234_consen 35 ISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGP 113 (631)
T ss_pred EeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCc
Confidence 33444455544444456789999877754444444 346789999994 688999999999999998531 122
Q ss_pred eeEEEEE--eecCc-cCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 018675 152 EFECVSV--LQGHA-QDVKMVQWHPTMDVLFSCSYDNTIKVWW 191 (352)
Q Consensus 152 ~~~~~~~--~~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~iw~ 191 (352)
.+..+.. +..|+ .+|.+..|.++|..++.+ ++.+.|++
T Consensus 114 ~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~d 154 (631)
T PF12234_consen 114 SWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFD 154 (631)
T ss_pred ccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEEC
Confidence 2222222 23344 578889999998765543 46777774
No 345
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.31 E-value=0.56 Score=39.66 Aligned_cols=169 Identities=15% Similarity=0.226 Sum_probs=104.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 154 (352)
..+.++.|+|+.+.|.+......-.++-...|+......+.+. .....+.+..++.+.++-=.++.+.++.+.......
T Consensus 86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~ 164 (316)
T COG3204 86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-SDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVI 164 (316)
T ss_pred ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-CChhHeEEecCCEEEEEehhcceEEEEEEcCCccEE
Confidence 4489999999999998888887777776556654333344442 334567777777777777778888888765443211
Q ss_pred EE-------EEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC-CceeEeeeeccCCCCcccEEEEEEcCC-
Q 018675 155 CV-------SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD-NWHCVQTISESNNGHSSTIWALSFNAK- 225 (352)
Q Consensus 155 ~~-------~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~h~~~i~~l~~~~~- 225 (352)
.. ......+...-.++|.|.+..|+.+-+-+=+.||........ .............-.-..|.++.|++.
T Consensus 165 ~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~ 244 (316)
T COG3204 165 SAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAIT 244 (316)
T ss_pred eccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCCC
Confidence 11 111112445678999999999999988887888865432211 000000000011112345667888864
Q ss_pred CCEEEEEeCCCcEEEEcCC
Q 018675 226 GDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 226 ~~~l~s~~~dg~i~iwd~~ 244 (352)
+.+|+-+.+++.+.-.|..
T Consensus 245 ~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 245 NSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred CcEEEEecCCceEEEEecC
Confidence 6667777778877777654
No 346
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.27 E-value=0.024 Score=55.48 Aligned_cols=103 Identities=16% Similarity=0.218 Sum_probs=65.7
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
+..++.|+..|.+...|..+ +..+...-..-.++|++++|+.+|..++.|-.+|.|.+||+..++..+.+.........
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~-nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTG-NLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhc-ccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 44577777777777766543 22221111123578999999999999999999999999999876654443322222233
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEe
Q 018675 166 VKMVQWHPTMDVLFSCSYDNTIKVWW 191 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~~i~iw~ 191 (352)
+..+.+..++..++++...|. +|.
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs--f~~ 201 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS--FWK 201 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc--eEE
Confidence 444455555666777766665 453
No 347
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.25 E-value=0.86 Score=41.21 Aligned_cols=172 Identities=10% Similarity=0.094 Sum_probs=90.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeee-e--eecceecceEEEEECC----
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA-V--LEEMHTRTVRSCAWSP---- 84 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~-~--~~~~h~~~v~~~~~s~---- 84 (352)
.+..-+....+.|++++.+.- -++|.|..||++.|.|+..+..++...- . ........|+++.|+.
T Consensus 77 ~P~~l~~~~~g~vtal~~S~i-------GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~ 149 (395)
T PF08596_consen 77 LPLTLLDAKQGPVTALKNSDI-------GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLG 149 (395)
T ss_dssp EEEEEE---S-SEEEEEE-BT-------SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-T
T ss_pred CchhheeccCCcEeEEecCCC-------cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecC
Confidence 444455566899999998643 4899999999999999977665544211 0 1112345677887752
Q ss_pred -CC---CEEEEEeCCCcEEEEEccC---Ccee--eeEeeccccCCeeEEE-ECCC---------------------CcEE
Q 018675 85 -SG---KLLATASFDATTCIWEDVG---GDYE--CVATLEGHENEVKSVS-WNAS---------------------GTLL 133 (352)
Q Consensus 85 -~~---~~l~s~~~d~~i~i~~~~~---~~~~--~~~~~~~h~~~v~~v~-~~~~---------------------~~~l 133 (352)
|+ -.+++|...|.+.+|.... +.+. .......+.+.|..+. ++.+ ..++
T Consensus 150 ~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~v 229 (395)
T PF08596_consen 150 GDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYV 229 (395)
T ss_dssp TSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEE
T ss_pred CCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEE
Confidence 33 4688899999999996541 2222 1112224556666554 3221 1144
Q ss_pred EEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc-----CCCCEEEEEeCCCcEEEEecCC
Q 018675 134 ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH-----PTMDVLFSCSYDNTIKVWWAED 194 (352)
Q Consensus 134 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~-----~~~~~l~s~~~d~~i~iw~~~~ 194 (352)
+.++ +..++++.....+. .+........+..+.+- ..+..|++-..+|.+++|.+..
T Consensus 230 VvvS-e~~irv~~~~~~k~---~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~ 291 (395)
T PF08596_consen 230 VVVS-ESDIRVFKPPKSKG---AHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPS 291 (395)
T ss_dssp EEE--SSEEEEE-TT---E---EEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT
T ss_pred EEEc-ccceEEEeCCCCcc---cceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCC
Confidence 4444 56799988754432 22222221122233332 2455678888999999997654
No 348
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.24 E-value=0.17 Score=46.74 Aligned_cols=126 Identities=17% Similarity=0.374 Sum_probs=75.2
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc---eeeeeeeeeecceecce--EEEEECCCCCEEEEEe
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS---RFWNCKAVLEEMHTRTV--RSCAWSPSGKLLATAS 93 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~---~~~~~~~~~~~~h~~~v--~~~~~s~~~~~l~s~~ 93 (352)
|.-+-|.++.|.|-... ..+.++...-.+.|.+|.+.... ..+...+.-+....-+| ..|-|+|....|+.=.
T Consensus 54 GqFEhV~GlsW~P~~~~--~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT 131 (671)
T PF15390_consen 54 GQFEHVHGLSWAPPCTA--DTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLT 131 (671)
T ss_pred eccceeeeeeecCcccC--CCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEe
Confidence 56678999999996432 23456666778999999875221 11111111111111122 4577999988877655
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee-CCCcEEEEec
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG-RDKSVWIWEV 147 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~ 147 (352)
....-.+++...........++ -.+.|.|.+|.+||++|+.+- ..-.-.+||-
T Consensus 132 ~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 132 ARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred cCceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence 5444445554433333334443 467899999999999876553 3345568884
No 349
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.22 E-value=0.38 Score=45.94 Aligned_cols=163 Identities=17% Similarity=0.200 Sum_probs=85.3
Q ss_pred cceEEEEECCCCCEEEEEe------CCCcEEEEEcc-CCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCc-EEEEe
Q 018675 75 RTVRSCAWSPSGKLLATAS------FDATTCIWEDV-GGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS-VWIWE 146 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~------~d~~i~i~~~~-~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-v~vwd 146 (352)
..+.+.+++|+|+.++... .|..-.||-.. .+....+ ..+ .....-.|+|+|..+.+.+.... +++.+
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~l--t~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQV--LEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceee--ecC--CCCCCceECCCCCceEEEecCcceEEEec
Confidence 3577889999999887665 34445566432 2222221 223 23778899999887777654322 22222
Q ss_pred cCCCCeeEEEEE----ee-cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEE
Q 018675 147 VMPGNEFECVSV----LQ-GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALS 221 (352)
Q Consensus 147 ~~~~~~~~~~~~----~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~ 221 (352)
-........+.. .. .....|..+.|+||+..++... ++.|.+--+....... ..+........+-...+.++.
T Consensus 426 ~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~ 503 (591)
T PRK13616 426 DPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLD 503 (591)
T ss_pred cCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc-eeecccEEeecccCCccccce
Confidence 111111100000 00 1234699999999999877655 4666553222222221 111111111112334467899
Q ss_pred EcCCCCEEEEEeCCCcEEEEcCC
Q 018675 222 FNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 222 ~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
|.+++.++ .+..++...+|-+.
T Consensus 504 W~~~~~L~-V~~~~~~~~v~~v~ 525 (591)
T PRK13616 504 WRTGDSLV-VGRSDPEHPVWYVN 525 (591)
T ss_pred EecCCEEE-EEecCCCCceEEEe
Confidence 99998855 55555555566443
No 350
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.18 E-value=0.062 Score=52.22 Aligned_cols=102 Identities=9% Similarity=0.059 Sum_probs=69.0
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYK 308 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~ 308 (352)
-..|-.++.+-.||.++.... ..+.+...+. ......+++.+.+|++|.|+.+|.|++|+... +
T Consensus 545 tflGls~n~lfriDpR~~~~k-----~v~~~~k~Y~--~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g---------~ 608 (794)
T PF08553_consen 545 TFLGLSDNSLFRIDPRLSGNK-----LVDSQSKQYS--SKNNFSCFATTEDGYIAVGSNKGDIRLYDRLG---------K 608 (794)
T ss_pred eEEEECCCceEEeccCCCCCc-----eeeccccccc--cCCCceEEEecCCceEEEEeCCCcEEeecccc---------h
Confidence 455777888999998753210 0011111111 23446677888899999999999999996321 1
Q ss_pred eeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 309 ~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.....+.+-..+|.+|..+.||+++|||| +..|.|++.
T Consensus 609 ~AKT~lp~lG~pI~~iDvt~DGkwilaTc--~tyLlLi~t 646 (794)
T PF08553_consen 609 RAKTALPGLGDPIIGIDVTADGKWILATC--KTYLLLIDT 646 (794)
T ss_pred hhhhcCCCCCCCeeEEEecCCCcEEEEee--cceEEEEEE
Confidence 11223446678999999999999999888 567877775
No 351
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.18 E-value=0.6 Score=38.75 Aligned_cols=182 Identities=12% Similarity=0.052 Sum_probs=99.7
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN 119 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~ 119 (352)
..++.++.++.+..||..+++..|+....- ... .. . ..++..++.+..++.+..+|..+++.. .........
T Consensus 37 ~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~-~~~-~~----~-~~~~~~v~v~~~~~~l~~~d~~tG~~~-W~~~~~~~~ 108 (238)
T PF13360_consen 37 GRVYVASGDGNLYALDAKTGKVLWRFDLPG-PIS-GA----P-VVDGGRVYVGTSDGSLYALDAKTGKVL-WSIYLTSSP 108 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSEEEEEEECSS-CGG-SG----E-EEETTEEEEEETTSEEEEEETTTSCEE-EEEEE-SSC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEeeccc-ccc-ce----e-eecccccccccceeeeEecccCCccee-eeecccccc
Confidence 567777899999999999988777654311 111 11 1 113455666668888989987777542 221111111
Q ss_pred --C-eeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC----------eeEEEEcCCCCEEEEEeCCCc
Q 018675 120 --E-VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD----------VKMVQWHPTMDVLFSCSYDNT 186 (352)
Q Consensus 120 --~-v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s~~~d~~ 186 (352)
. .........++.++.+..++.|..+|+..++. +......... +..-....++ .++.++.++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~---~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~ 184 (238)
T PF13360_consen 109 PAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKL---LWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGR 184 (238)
T ss_dssp TCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEE---EEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSS
T ss_pred ccccccccCceEecCEEEEEeccCcEEEEecCCCcE---EEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCe
Confidence 1 11112222367788888899999999877653 2222222211 1111122233 6667777775
Q ss_pred EEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 187 i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
+..++....... | .... ..+.. ...+++..|+.++.++.|..||++.
T Consensus 185 ~~~~d~~tg~~~-w------~~~~----~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~t 231 (238)
T PF13360_consen 185 VVAVDLATGEKL-W------SKPI----SGIYS-LPSVDGGTLYVTSSDGRLYALDLKT 231 (238)
T ss_dssp EEEEETTTTEEE-E------EECS----S-ECE-CEECCCTEEEEEETTTEEEEEETTT
T ss_pred EEEEECCCCCEE-E------EecC----CCccC-CceeeCCEEEEEeCCCEEEEEECCC
Confidence 333366543210 1 1011 11222 1346677888888999999999764
No 352
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.17 E-value=0.018 Score=34.21 Aligned_cols=30 Identities=23% Similarity=0.446 Sum_probs=27.8
Q ss_pred cCCeeEEEECCCCcEEEEeeCCCcEEEEec
Q 018675 118 ENEVKSVSWNASGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~ 147 (352)
...|.+++|+|..++||.+..||.|.++++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 456999999999999999999999999997
No 353
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.15 E-value=0.82 Score=43.25 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCeeEEEECCCCcEEEEee-CCCcEEEEecCCCCe-----eE----EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEE
Q 018675 119 NEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNE-----FE----CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~-----~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 188 (352)
...+.+.++|||++++.++ .+.++.|.|+..... .+ .+....- ...-...+|.+++....+.--|..|.
T Consensus 321 KsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~ 399 (635)
T PRK02888 321 KNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIV 399 (635)
T ss_pred CCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeE
Confidence 4567889999999866554 589999999864321 00 1111111 11223567888888777888899999
Q ss_pred EEecCC
Q 018675 189 VWWAED 194 (352)
Q Consensus 189 iw~~~~ 194 (352)
.|++..
T Consensus 400 kwn~~~ 405 (635)
T PRK02888 400 KWNIEA 405 (635)
T ss_pred EEehHH
Confidence 998754
No 354
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.14 E-value=0.85 Score=40.08 Aligned_cols=155 Identities=6% Similarity=0.106 Sum_probs=89.9
Q ss_pred eEEEEECCC----CCEEEEEeC----------CCcEEEEEccCC-----ceeeeEeeccccCCeeEEEECCCCcEEEEee
Q 018675 77 VRSCAWSPS----GKLLATASF----------DATTCIWEDVGG-----DYECVATLEGHENEVKSVSWNASGTLLATCG 137 (352)
Q Consensus 77 v~~~~~s~~----~~~l~s~~~----------d~~i~i~~~~~~-----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 137 (352)
+..+.|..+ ..+++.|.. .|.+.+++.... +.+.+... ...++|.+++-. .+. |+.+.
T Consensus 29 ~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~-~~~-lv~~~ 105 (321)
T PF03178_consen 29 LCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHST-EVKGPVTAICSF-NGR-LVVAV 105 (321)
T ss_dssp EEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEE-EESS-EEEEEEE-TTE-EEEEE
T ss_pred EEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEE-eecCcceEhhhh-CCE-EEEee
Confidence 334445543 356666642 177888887653 33333332 357889988755 344 44443
Q ss_pred CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccE
Q 018675 138 RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217 (352)
Q Consensus 138 ~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i 217 (352)
.+.|.+|++...........+..+. .++++... +++++.|.....+.++..... ... +..+.. +.....+
T Consensus 106 -g~~l~v~~l~~~~~l~~~~~~~~~~-~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~-~~~---l~~va~--d~~~~~v 175 (321)
T PF03178_consen 106 -GNKLYVYDLDNSKTLLKKAFYDSPF-YITSLSVF--KNYILVGDAMKSVSLLRYDEE-NNK---LILVAR--DYQPRWV 175 (321)
T ss_dssp -TTEEEEEEEETTSSEEEEEEE-BSS-SEEEEEEE--TTEEEEEESSSSEEEEEEETT-TE----EEEEEE--ESS-BEE
T ss_pred -cCEEEEEEccCcccchhhheecceE-EEEEEecc--ccEEEEEEcccCEEEEEEEcc-CCE---EEEEEe--cCCCccE
Confidence 3789999987665233333333322 45555544 558889988888887744331 111 112211 1234568
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 218 WALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 218 ~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.++.|-++++.++.+..+|.+.++..+
T Consensus 176 ~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 176 TAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 888887666799999999999999764
No 355
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.95 E-value=0.73 Score=43.95 Aligned_cols=180 Identities=16% Similarity=0.286 Sum_probs=89.1
Q ss_pred CCCEEEEEeCCC------cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC------CcEEEEecCCCCe
Q 018675 85 SGKLLATASFDA------TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD------KSVWIWEVMPGNE 152 (352)
Q Consensus 85 ~~~~l~s~~~d~------~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d------~~v~vwd~~~~~~ 152 (352)
.+.+++.|+.++ ++..||..++.+.....+..... -.+++. -.+...++||.| .++..||.....
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~-~~~~~~-~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~- 360 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRC-RVGVAV-LNGKLYVVGGYDSGSDRLSSVERYDPRTNQ- 360 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccc-cccEEE-ECCEEEEEccccCCCcccceEEEecCCCCc-
Confidence 456677777773 56678777665555544442222 223333 245778888888 355667754433
Q ss_pred eEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC-----cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 227 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~ 227 (352)
+..+..+.......... .-++.+.++|+.|| ++..||. ..+.|...........+|. ... -+|.
T Consensus 361 W~~~a~M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp---~~~~W~~va~m~~~r~~~g----v~~--~~g~ 429 (571)
T KOG4441|consen 361 WTPVAPMNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDP---VTNKWTPVAPMLTRRSGHG----VAV--LGGK 429 (571)
T ss_pred eeccCCccCccccceeE--EECCEEEEEeccccccccccEEEecC---CCCcccccCCCCcceeeeE----EEE--ECCE
Confidence 22222211111111111 12566778888886 3555643 3344544433322111221 112 3577
Q ss_pred EEEEEeCCCc------EEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCC
Q 018675 228 KLVSCSDDLT------IKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289 (352)
Q Consensus 228 ~l~s~~~dg~------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~ 289 (352)
..+.||.++. +..||.. ...|+....+.. ...-..++.-.+.+++.|+.|+
T Consensus 430 iYi~GG~~~~~~~l~sve~YDP~---------t~~W~~~~~M~~--~R~~~g~a~~~~~iYvvGG~~~ 486 (571)
T KOG4441|consen 430 LYIIGGGDGSSNCLNSVECYDPE---------TNTWTLIAPMNT--RRSGFGVAVLNGKIYVVGGFDG 486 (571)
T ss_pred EEEEcCcCCCccccceEEEEcCC---------CCceeecCCccc--ccccceEEEECCEEEEECCccC
Confidence 8888886664 4445432 134554433321 1122234444556777777776
No 356
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=95.93 E-value=0.03 Score=33.29 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=27.8
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 214 ~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
...|..++|+|+.+++|.+..+|.|.++.++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4569999999999999999999999999653
No 357
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=95.87 E-value=0.46 Score=43.61 Aligned_cols=156 Identities=20% Similarity=0.253 Sum_probs=75.6
Q ss_pred cCCccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC
Q 018675 5 DDGNYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP 84 (352)
Q Consensus 5 ~~~~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 84 (352)
.||+...-....+....-....+.++|+ +.+++. .+||.-.|+...... .+ ..+.-....|.+
T Consensus 16 ~dg~~~~l~~k~lg~~~~~p~~ls~npn------gr~v~V-~g~geY~iyt~~~~r----~k------~~G~g~~~vw~~ 78 (443)
T PF04053_consen 16 KDGERLPLSVKELGSCEIYPQSLSHNPN------GRFVLV-CGDGEYEIYTALAWR----NK------AFGSGLSFVWSS 78 (443)
T ss_dssp -TTS-B----EEEEE-SS--SEEEE-TT------SSEEEE-EETTEEEEEETTTTE----EE------EEEE-SEEEE-T
T ss_pred CCCceeeEEeccCCCCCcCCeeEEECCC------CCEEEE-EcCCEEEEEEccCCc----cc------ccCceeEEEEec
Confidence 3444333333444334445678999997 355555 568888888733211 11 124456677988
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 85 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 85 ~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
.++ +|+-...++|.++..... .....++- ...+..+- + |.+|+..+.+ .|.+||...++. +..+. ..
T Consensus 79 ~n~-yAv~~~~~~I~I~kn~~~--~~~k~i~~-~~~~~~If--~-G~LL~~~~~~-~i~~yDw~~~~~---i~~i~--v~ 145 (443)
T PF04053_consen 79 RNR-YAVLESSSTIKIYKNFKN--EVVKSIKL-PFSVEKIF--G-GNLLGVKSSD-FICFYDWETGKL---IRRID--VS 145 (443)
T ss_dssp SSE-EEEE-TTS-EEEEETTEE---TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--E---EEEES--S-
T ss_pred Ccc-EEEEECCCeEEEEEcCcc--ccceEEcC-CcccceEE--c-CcEEEEECCC-CEEEEEhhHcce---eeEEe--cC
Confidence 555 555556888999743221 11111211 11233332 2 7777666554 799999976543 33333 23
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 018675 165 DVKMVQWHPTMDVLFSCSYDNTIKVWW 191 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~~~d~~i~iw~ 191 (352)
+|..+-|++++.+++..+.+ .+.|++
T Consensus 146 ~vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 146 AVKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 47899999999998887755 566664
No 358
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=95.69 E-value=0.69 Score=44.04 Aligned_cols=101 Identities=14% Similarity=0.416 Sum_probs=64.7
Q ss_pred EEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEEC--CCCCEEEEEeCCCcEEEEEccC-------Cceeee
Q 018675 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS--PSGKLLATASFDATTCIWEDVG-------GDYECV 111 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s--~~~~~l~s~~~d~~i~i~~~~~-------~~~~~~ 111 (352)
..+.-+.-.++.|||.....-. ....+ ...+.|.++.|. |+|+.+++.+..+.|.+|-... ..+.++
T Consensus 43 ~a~V~~~~~~LtIWD~~~~~lE--~~~~f--~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i 118 (631)
T PF12234_consen 43 IAVVDSSRSELTIWDTRSGVLE--YEESF--SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPI 118 (631)
T ss_pred EEEEECCCCEEEEEEcCCcEEE--Eeeee--cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCccccee
Confidence 3333334467999998765311 11111 236789999984 6899999999999999985421 111222
Q ss_pred Ee--ecccc-CCeeEEEECCCCcEEEEeeCCCcEEEEec
Q 018675 112 AT--LEGHE-NEVKSVSWNASGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 112 ~~--~~~h~-~~v~~v~~~~~~~~l~s~~~d~~v~vwd~ 147 (352)
.. +..|+ .+|.+..|.++|.+++++| +.+.|+|-
T Consensus 119 ~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 119 RKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred EEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 22 23344 5788999999998776655 56778773
No 359
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.62 E-value=1.3 Score=42.37 Aligned_cols=179 Identities=15% Similarity=0.243 Sum_probs=88.8
Q ss_pred ccEEEEeeCC------CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC-C-----cEEEEEccCC
Q 018675 39 APVFASCSGD------KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD-A-----TTCIWEDVGG 106 (352)
Q Consensus 39 ~~~l~s~s~D------~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-~-----~i~i~~~~~~ 106 (352)
+.+++.||.+ ..+..+|..++. |....... ....-.+++.- ++.+.++||.| + ++-.||...+
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~--w~~~a~m~--~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~ 359 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNE--WSSLAPMP--SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTN 359 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCc--EeecCCCC--cccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCC
Confidence 3566777766 367777776552 32211111 12222233333 56888899988 3 4556777666
Q ss_pred ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC-----cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEE
Q 018675 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDK-----SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181 (352)
Q Consensus 107 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 181 (352)
++.....+.......-.. .-+|...+.||.|| ++-.||.... .+..+............+ .-.+.+.+.|
T Consensus 360 ~W~~~a~M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~-~W~~va~m~~~r~~~gv~--~~~g~iYi~G 434 (571)
T KOG4441|consen 360 QWTPVAPMNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTN-KWTPVAPMLTRRSGHGVA--VLGGKLYIIG 434 (571)
T ss_pred ceeccCCccCccccceeE--EECCEEEEEeccccccccccEEEecCCCC-cccccCCCCcceeeeEEE--EECCEEEEEc
Confidence 655444343222222111 12567788888886 3555664322 222221111101111111 2256667777
Q ss_pred eCCC------cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 182 SYDN------TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 182 ~~d~------~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
|.++ ++..||. ..+.|...........+|. + +. -++...+.||.|+
T Consensus 435 G~~~~~~~l~sve~YDP---~t~~W~~~~~M~~~R~~~g--~---a~-~~~~iYvvGG~~~ 486 (571)
T KOG4441|consen 435 GGDGSSNCLNSVECYDP---ETNTWTLIAPMNTRRSGFG--V---AV-LNGKIYVVGGFDG 486 (571)
T ss_pred CcCCCccccceEEEEcC---CCCceeecCCcccccccce--E---EE-ECCEEEEECCccC
Confidence 7655 4556643 4455655544443333333 1 11 2467778888777
No 360
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.61 E-value=1.1 Score=40.01 Aligned_cols=89 Identities=15% Similarity=0.365 Sum_probs=51.0
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec-------C------
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG-------H------ 162 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-------h------ 162 (352)
+.+.+||..++....+.. ....+....|+|+|+.++-.. ++.|.++++..+.... + +..+ -
T Consensus 23 ~~y~i~d~~~~~~~~l~~---~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~-l-T~dg~~~i~nG~~dwvye 96 (353)
T PF00930_consen 23 GDYYIYDIETGEITPLTP---PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ-L-TTDGEPGIYNGVPDWVYE 96 (353)
T ss_dssp EEEEEEETTTTEEEESS----EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE-S-ES--TTTEEESB--HHHH
T ss_pred eeEEEEecCCCceEECcC---CccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE-e-ccccceeEEcCccceecc
Confidence 457788887765433322 256788999999999988775 4678888865442111 1 1111 0
Q ss_pred ---ccCeeEEEEcCCCCEEEEEeC-CCcEEEE
Q 018675 163 ---AQDVKMVQWHPTMDVLFSCSY-DNTIKVW 190 (352)
Q Consensus 163 ---~~~v~~~~~~~~~~~l~s~~~-d~~i~iw 190 (352)
-..-..+-|+|+++.|+.... ++.++.+
T Consensus 97 EEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~ 128 (353)
T PF00930_consen 97 EEVFDRRSAVWWSPDSKYLAFLRFDEREVPEY 128 (353)
T ss_dssp HHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EE
T ss_pred ccccccccceEECCCCCEEEEEEECCcCCceE
Confidence 011235779999998876654 3445544
No 361
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=95.44 E-value=1.1 Score=40.99 Aligned_cols=123 Identities=19% Similarity=0.162 Sum_probs=64.8
Q ss_pred eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE-eCCCcEEEE--EccCCceeeeEeeccccCCeeEEEE
Q 018675 50 TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA-SFDATTCIW--EDVGGDYECVATLEGHENEVKSVSW 126 (352)
Q Consensus 50 ~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~d~~i~i~--~~~~~~~~~~~~~~~h~~~v~~v~~ 126 (352)
.+.++++.++....... -.+.-..-+|+|||+.|+-. ..|+...|| |..++... .+..-.+.-..-.|
T Consensus 219 ~i~~~~l~~g~~~~i~~------~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~---~Lt~~~gi~~~Ps~ 289 (425)
T COG0823 219 RIYYLDLNTGKRPVILN------FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP---RLTNGFGINTSPSW 289 (425)
T ss_pred eEEEEeccCCccceeec------cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcce---ecccCCccccCccC
Confidence 47777776654321111 12233445899999877644 456766655 44443322 13222222235678
Q ss_pred CCCCcEEEEee-CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC
Q 018675 127 NASGTLLATCG-RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183 (352)
Q Consensus 127 ~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 183 (352)
+|+|+.++-.+ ..|.-.+|-...........+... ..-..-.|+|+++.++..+.
T Consensus 290 spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~--~~~~~p~~SpdG~~i~~~~~ 345 (425)
T COG0823 290 SPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSG--GGNSNPVWSPDGDKIVFESS 345 (425)
T ss_pred CCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccC--CCCcCccCCCCCCEEEEEec
Confidence 99999866554 455555554432222111112222 22225578999998876664
No 362
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.40 E-value=0.076 Score=52.16 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=64.9
Q ss_pred EEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCC
Q 018675 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~ 120 (352)
.++.|+.-|.+-..|+..+-. .....+.-.++|++++|+.+|+.++.|-.+|-|.+||..+++. ...+..|..+
T Consensus 101 ~ivi~Ts~ghvl~~d~~~nL~----~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~--l~~i~e~~ap 174 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGNLG----PLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKI--LKVITEHGAP 174 (1206)
T ss_pred eEEEEcCchhhhhhhhhcccc----hhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcc--eeeeeecCCc
Confidence 466666777777766543211 0111122357999999999999999999999999999887643 3344444444
Q ss_pred ee---EEEECCCCcEEEEeeCCCcEEEEec
Q 018675 121 VK---SVSWNASGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 121 v~---~v~~~~~~~~l~s~~~d~~v~vwd~ 147 (352)
+. -+.+..++..++++..-|. +|.+
T Consensus 175 ~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 175 VTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred cceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 33 3444455557777777775 6664
No 363
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=95.28 E-value=0.084 Score=42.67 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=54.5
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc-c
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA-Q 164 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~-~ 164 (352)
+.-++.|+.+|.+.+|........+-....+.+...+-|.--.++.+..+++.|+.|+.|.+.+.+.. .....|. .
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~---g~~g~h~~~ 146 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVL---GYVGQHNFE 146 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCcee---eeeccccCC
Confidence 46788899999999986531110000000111111222222235567889999999999998776532 2223344 3
Q ss_pred CeeEEEEcCCCCEEEEE--eCCCcEEEEec
Q 018675 165 DVKMVQWHPTMDVLFSC--SYDNTIKVWWA 192 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~--~~d~~i~iw~~ 192 (352)
++..+.....+..+..+ |.|..++.|++
T Consensus 147 ~~e~~ivv~sd~~i~~a~~S~d~~~k~W~v 176 (238)
T KOG2444|consen 147 SGEELIVVGSDEFLKIADTSHDRVLKKWNV 176 (238)
T ss_pred CcceeEEecCCceEEeeccccchhhhhcch
Confidence 33333333334444444 55555555544
No 364
>PHA02713 hypothetical protein; Provisional
Probab=95.19 E-value=1.5 Score=41.74 Aligned_cols=146 Identities=8% Similarity=0.110 Sum_probs=71.1
Q ss_pred CCCEEEEEeCCC-----cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC-------------------
Q 018675 85 SGKLLATASFDA-----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK------------------- 140 (352)
Q Consensus 85 ~~~~l~s~~~d~-----~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~------------------- 140 (352)
+|++.+.||.++ ++..||..++.+.....+.........+. -++...+.||.++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~ 428 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT 428 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccc
Confidence 678888888764 36778877766554433322211122222 2566667776542
Q ss_pred ----cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC------cEEEEecCCCCCCCceeEeeeeccC
Q 018675 141 ----SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN------TIKVWWAEDTDSDNWHCVQTISESN 210 (352)
Q Consensus 141 ----~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~------~i~iw~~~~~~~~~~~~~~~~~~~~ 210 (352)
++..||.... .+..+..+....... +++ .-++.+.+.|+.++ .+..||... .+.|.....+....
T Consensus 429 ~~~~~ve~YDP~td-~W~~v~~m~~~r~~~-~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~--~~~W~~~~~m~~~r 503 (557)
T PHA02713 429 HSSNKVIRYDTVNN-IWETLPNFWTGTIRP-GVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNT--YNGWELITTTESRL 503 (557)
T ss_pred cccceEEEECCCCC-eEeecCCCCcccccC-cEE-EECCEEEEEeCCCCCCccceeEEEecCCC--CCCeeEccccCccc
Confidence 3556665432 222222111111111 111 12455556666542 355675432 13566554443222
Q ss_pred CCCcccEEEEEEcCCCCEEEEEeCCC--cEEEEcC
Q 018675 211 NGHSSTIWALSFNAKGDKLVSCSDDL--TIKIWGA 243 (352)
Q Consensus 211 ~~h~~~i~~l~~~~~~~~l~s~~~dg--~i~iwd~ 243 (352)
.. ...+.+ ++...+.||.|| .+-.||.
T Consensus 504 ~~----~~~~~~--~~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 504 SA----LHTILH--DNTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred cc----ceeEEE--CCEEEEEeeecceeehhhcCc
Confidence 21 222222 578888999888 4555543
No 365
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=95.14 E-value=2.5 Score=38.41 Aligned_cols=262 Identities=12% Similarity=0.113 Sum_probs=124.2
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN 119 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~ 119 (352)
..++.++.++.+.-+|..+++..|+....- .....++. .+..++.+..++.+..+|..+++.. . ..... .
T Consensus 121 ~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~ssP~v------~~~~v~v~~~~g~l~ald~~tG~~~-W-~~~~~-~ 190 (394)
T PRK11138 121 GKVYIGSEKGQVYALNAEDGEVAWQTKVAG-EALSRPVV------SDGLVLVHTSNGMLQALNESDGAVK-W-TVNLD-V 190 (394)
T ss_pred CEEEEEcCCCEEEEEECCCCCCcccccCCC-ceecCCEE------ECCEEEEECCCCEEEEEEccCCCEe-e-eecCC-C
Confidence 355666788999999999988888653211 01111111 2345566777888888888777531 1 11110 0
Q ss_pred CeeEE--EECC--CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec---Cc-cCeeEEEEcC--CCCEEEEEeCCCcEEE
Q 018675 120 EVKSV--SWNA--SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG---HA-QDVKMVQWHP--TMDVLFSCSYDNTIKV 189 (352)
Q Consensus 120 ~v~~v--~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~---h~-~~v~~~~~~~--~~~~l~s~~~d~~i~i 189 (352)
+...+ .-+| .+..++.++.++.+...|...++..-....... +. .....+..+| .+..++.++.++.+..
T Consensus 191 ~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~a 270 (394)
T PRK11138 191 PSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVA 270 (394)
T ss_pred CcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEE
Confidence 00000 0011 123455677788888888765542111100000 00 0000111122 2456677778888888
Q ss_pred EecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCc
Q 018675 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 269 (352)
Q Consensus 190 w~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (352)
+|..... ..|+. .+ +. ...+. ..+..+..++.+|.+..+|....+ ..|+... .. ..
T Consensus 271 ld~~tG~-~~W~~--~~-----~~---~~~~~--~~~~~vy~~~~~g~l~ald~~tG~-------~~W~~~~-~~---~~ 326 (394)
T PRK11138 271 LDLRSGQ-IVWKR--EY-----GS---VNDFA--VDGGRIYLVDQNDRVYALDTRGGV-------ELWSQSD-LL---HR 326 (394)
T ss_pred EECCCCC-EEEee--cC-----CC---ccCcE--EECCEEEEEcCCCeEEEEECCCCc-------EEEcccc-cC---CC
Confidence 8765432 11211 11 00 00111 135566777788888888764321 1222110 00 00
Q ss_pred ceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeE-EEecCCCcceEEEecCCCeEEEEee
Q 018675 270 TIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS-VQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 270 ~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
...+... .++++..++.+|.+...+.....+ +-+.......+.+ -.+ .++ .++ .++.||.|..++.
T Consensus 327 ~~~sp~v-~~g~l~v~~~~G~l~~ld~~tG~~---------~~~~~~~~~~~~s~P~~-~~~-~l~-v~t~~G~l~~~~~ 393 (394)
T PRK11138 327 LLTAPVL-YNGYLVVGDSEGYLHWINREDGRF---------VAQQKVDSSGFLSEPVV-ADD-KLL-IQARDGTVYAITR 393 (394)
T ss_pred cccCCEE-ECCEEEEEeCCCEEEEEECCCCCE---------EEEEEcCCCcceeCCEE-ECC-EEE-EEeCCceEEEEeC
Confidence 0011111 256777888889888775543221 1111111112221 122 234 455 5788998887654
No 366
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.12 E-value=0.27 Score=44.83 Aligned_cols=115 Identities=8% Similarity=0.032 Sum_probs=72.9
Q ss_pred EEEEEEcCCCCE-------EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCC
Q 018675 217 IWALSFNAKGDK-------LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289 (352)
Q Consensus 217 i~~l~~~~~~~~-------l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~ 289 (352)
|+-+.+.|+... -+.|-.|+.|--||.+..... ...|.+...+.. .....++....+|+++.|+.+|
T Consensus 378 i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~----kl~~~q~kqy~~--k~nFsc~aTT~sG~IvvgS~~G 451 (644)
T KOG2395|consen 378 INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN----KLAVVQSKQYST--KNNFSCFATTESGYIVVGSLKG 451 (644)
T ss_pred cceeeccCCcchhcccccccEEeecCCceEEecccccCcc----eeeeeecccccc--ccccceeeecCCceEEEeecCC
Confidence 666777776432 233556788888987643211 111222222221 2334566667789999999999
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.|++|+.... ....-+.+...+|..+..+.+|+++|+|| +..+.+-++
T Consensus 452 dIRLYdri~~---------~AKTAlPgLG~~I~hVdvtadGKwil~Tc--~tyLlLi~t 499 (644)
T KOG2395|consen 452 DIRLYDRIGR---------RAKTALPGLGDAIKHVDVTADGKWILATC--KTYLLLIDT 499 (644)
T ss_pred cEEeehhhhh---------hhhhcccccCCceeeEEeeccCcEEEEec--ccEEEEEEE
Confidence 9999965221 11122456778999999999999888777 667776655
No 367
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.11 E-value=0.81 Score=41.85 Aligned_cols=141 Identities=11% Similarity=0.067 Sum_probs=85.2
Q ss_pred EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCc-------EEEEeeCCCcEEEEecCCCCeeEEEEEeec
Q 018675 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-------LLATCGRDKSVWIWEVMPGNEFECVSVLQG 161 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-------~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 161 (352)
+.++.....+.-.|...|+. +..++-+.. |+-+.+.|+.. .-+.|-.|+.|.-||.+-... ..+..-++
T Consensus 349 l~~~~~~~~l~klDIE~GKI--VeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~-~kl~~~q~ 424 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGKI--VEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK-NKLAVVQS 424 (644)
T ss_pred eeCCCCcCcceeeeccccee--eeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCc-ceeeeeec
Confidence 34455555666667777643 445554444 66677777542 223456678888899764332 12223333
Q ss_pred Cc----cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCc
Q 018675 162 HA----QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237 (352)
Q Consensus 162 h~----~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~ 237 (352)
|. ....|.+-..+| ++++||.+|.|++|+-...+ .+ ....+.+.+|..|..+.+|..++..+ +.+
T Consensus 425 kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~------AK---TAlPgLG~~I~hVdvtadGKwil~Tc-~ty 493 (644)
T KOG2395|consen 425 KQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRR------AK---TALPGLGDAIKHVDVTADGKWILATC-KTY 493 (644)
T ss_pred cccccccccceeeecCCc-eEEEeecCCcEEeehhhhhh------hh---hcccccCCceeeEEeeccCcEEEEec-ccE
Confidence 33 234455544444 68999999999999642211 11 12346788999999999999877554 566
Q ss_pred EEEEcCC
Q 018675 238 IKIWGAD 244 (352)
Q Consensus 238 i~iwd~~ 244 (352)
+.+-++.
T Consensus 494 LlLi~t~ 500 (644)
T KOG2395|consen 494 LLLIDTL 500 (644)
T ss_pred EEEEEEe
Confidence 6666653
No 368
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.87 E-value=2.1 Score=36.21 Aligned_cols=149 Identities=19% Similarity=0.206 Sum_probs=82.7
Q ss_pred ceEEEEEccCCCCCCCccEEEEee-CCC--eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCS-GDK--TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s-~D~--~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
.+.+.+.+|+. ..+|... .++ .+.++....... ... -...+..-+|++++...+....+....
T Consensus 25 ~~~s~AvS~dg------~~~A~v~~~~~~~~L~~~~~~~~~~-----~~~---~g~~l~~PS~d~~g~~W~v~~~~~~~~ 90 (253)
T PF10647_consen 25 DVTSPAVSPDG------SRVAAVSEGDGGRSLYVGPAGGPVR-----PVL---TGGSLTRPSWDPDGWVWTVDDGSGGVR 90 (253)
T ss_pred cccceEECCCC------CeEEEEEEcCCCCEEEEEcCCCcce-----eec---cCCccccccccCCCCEEEEEcCCCceE
Confidence 67788888874 3444333 333 444444332211 111 123567778999988777766666666
Q ss_pred EEE-ccCCceeeeEee-ccccCCeeEEEECCCCcEEEEee---CCCcEEEEecCCCCee------EEEEEeecCccCeeE
Q 018675 100 IWE-DVGGDYECVATL-EGHENEVKSVSWNASGTLLATCG---RDKSVWIWEVMPGNEF------ECVSVLQGHAQDVKM 168 (352)
Q Consensus 100 i~~-~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~---~d~~v~vwd~~~~~~~------~~~~~~~~h~~~v~~ 168 (352)
++. ...+.......- ..-.+.|.++.++|+|..++... .++.|.+=-+...... ............++.
T Consensus 91 ~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~ 170 (253)
T PF10647_consen 91 VVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTD 170 (253)
T ss_pred EEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCccee
Confidence 663 223322222211 11122899999999999866554 3466666554322111 111222233457889
Q ss_pred EEEcCCCCEEEEEeCCC
Q 018675 169 VQWHPTMDVLFSCSYDN 185 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d~ 185 (352)
+.|.++..+++.+...+
T Consensus 171 v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 171 VAWSDDSTLVVLGRSAG 187 (253)
T ss_pred eeecCCCEEEEEeCCCC
Confidence 99999888766555433
No 369
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=94.65 E-value=0.14 Score=41.45 Aligned_cols=103 Identities=10% Similarity=0.080 Sum_probs=60.0
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEEC--CCCCEEEEEeCCCcEEEEEccCCceeeeEeecc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS--PSGKLLATASFDATTCIWEDVGGDYECVATLEG 116 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s--~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~ 116 (352)
..-++.|+.||.|.+|++.-......... . ......+.+. .++.+..++..|+.|+.|....+. .+.....
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~---s--~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k--~~g~~g~ 142 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVC---S--GEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNK--VLGYVGQ 142 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhh---c--ccccceeccccccccceeEEeccCCceeeeccccCc--eeeeecc
Confidence 35688889999999998763211100000 0 0111222222 244578889999999999876553 3344445
Q ss_pred cc-CCeeEEEECCCCcEEEEe--eCCCcEEEEecC
Q 018675 117 HE-NEVKSVSWNASGTLLATC--GRDKSVWIWEVM 148 (352)
Q Consensus 117 h~-~~v~~v~~~~~~~~l~s~--~~d~~v~vwd~~ 148 (352)
|+ ..+..+..+..+..++.+ |.|..++.|++.
T Consensus 143 h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 143 HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 65 445555555555666666 667777777763
No 370
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=94.44 E-value=1.2 Score=40.67 Aligned_cols=111 Identities=15% Similarity=0.204 Sum_probs=60.9
Q ss_pred EEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC-CCc--EEEEEc
Q 018675 27 LAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF-DAT--TCIWED 103 (352)
Q Consensus 27 i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d~~--i~i~~~ 103 (352)
-.|+|+. .+++++...|+...||-.+-..+. ..... . ..+.-..=.|+|||+.++-.+. .|. |.+++.
T Consensus 243 P~fspDG-----~~l~f~~~rdg~~~iy~~dl~~~~--~~~Lt-~-~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~ 313 (425)
T COG0823 243 PAFSPDG-----SKLAFSSSRDGSPDIYLMDLDGKN--LPRLT-N-GFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDL 313 (425)
T ss_pred ccCCCCC-----CEEEEEECCCCCccEEEEcCCCCc--ceecc-c-CCccccCccCCCCCCEEEEEeCCCCCcceEEECC
Confidence 5788874 367788888999888854322211 11111 0 0111124479999999887654 344 444444
Q ss_pred cCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-Cc--EEEEecCC
Q 018675 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-KS--VWIWEVMP 149 (352)
Q Consensus 104 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-~~--v~vwd~~~ 149 (352)
.++... ..+..+ +.-..-.|+|+|.+++..+.. |. |.+.|+..
T Consensus 314 ~g~~~~-riT~~~--~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 314 EGSQVT-RLTFSG--GGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLAS 359 (425)
T ss_pred CCCcee-EeeccC--CCCcCccCCCCCCEEEEEeccCCceeeEEeccCC
Confidence 444322 222222 222267789999998877643 33 44444433
No 371
>PRK13616 lipoprotein LpqB; Provisional
Probab=94.34 E-value=3.2 Score=39.77 Aligned_cols=107 Identities=15% Similarity=0.202 Sum_probs=57.1
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEE---EEccCCceeee--Eeec-cccCCeeEEEECCCCcEEEEeeCCCcEEEEec
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCI---WEDVGGDYECV--ATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i---~~~~~~~~~~~--~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~ 147 (352)
.+.|..+.|||||..++.-. ++.+.+ -....+..... ..+. .-...+..+.|.+++.++ .+..+....+|.+
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence 45799999999999887655 466655 22233432210 1122 222346889999988865 4444454556765
Q ss_pred CCCCeeEEEEEeec--CccCeeEEEEcCCCCEEEEEeCCCc
Q 018675 148 MPGNEFECVSVLQG--HAQDVKMVQWHPTMDVLFSCSYDNT 186 (352)
Q Consensus 148 ~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~ 186 (352)
.-....... +.+ ...++..++-.++ .++.+..++.
T Consensus 525 ~vDG~~~~~--~~~~n~~~~v~~vaa~~~--~iyv~~~~g~ 561 (591)
T PRK13616 525 NLDGSNSDA--LPSRNLSAPVVAVAASPS--TVYVTDARAV 561 (591)
T ss_pred ecCCccccc--cCCCCccCceEEEecCCc--eEEEEcCCce
Confidence 433322111 112 2345566665553 3444444553
No 372
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=93.91 E-value=3.9 Score=35.47 Aligned_cols=238 Identities=15% Similarity=0.202 Sum_probs=103.6
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccc--cCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGH--ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
..++..++|..+..-.++| ..+.|.-=.+-...+.....-... .-...+|.|.. .+.+++ +..+ +.+.....+.
T Consensus 16 ~~~l~dV~F~d~~~G~~VG-~~g~il~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~-~~g~iv-G~~g-~ll~T~DgG~ 91 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVG-AYGTILKTTDGGKTWQPVSLDLDNPFDYHLNSISFDG-NEGWIV-GEPG-LLLHTTDGGK 91 (302)
T ss_dssp SS-EEEEEESSSS-EEEEE-TTTEEEEESSTTSS-EE-----S-----EEEEEEEET-TEEEEE-EETT-EEEEESSTTS
T ss_pred CCceEEEEEecCCEEEEEe-cCCEEEEECCCCccccccccCCCccceeeEEEEEecC-CceEEE-cCCc-eEEEecCCCC
Confidence 3578999998555555555 456553322222233332211111 12355677754 344444 4445 3344444455
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
....+..-..-......+....+. ....++..+. ||...+ .-.+|+.+.. .-...+..+..+++|.++++
T Consensus 92 tW~~v~l~~~lpgs~~~i~~l~~~-~~~l~~~~G~--iy~T~D-gG~tW~~~~~------~~~gs~~~~~r~~dG~~vav 161 (302)
T PF14870_consen 92 TWERVPLSSKLPGSPFGITALGDG-SAELAGDRGA--IYRTTD-GGKTWQAVVS------ETSGSINDITRSSDGRYVAV 161 (302)
T ss_dssp S-EE----TT-SS-EEEEEEEETT-EEEEEETT----EEEESS-TTSSEEEEE-------S----EEEEEE-TTS-EEEE
T ss_pred CcEEeecCCCCCCCeeEEEEcCCC-cEEEEcCCCc--EEEeCC-CCCCeeEccc------CCcceeEeEEECCCCcEEEE
Confidence 544432111111122222222233 3333445554 343333 2335554321 12356888889999999988
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceee
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLL 311 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~ 311 (352)
+.....+.-|+- +...|.+.... ....+.++.+.+++.+-.....+.+++-+... +.....+.+
T Consensus 162 s~~G~~~~s~~~---------G~~~w~~~~r~---~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~----~~~~w~~~~ 225 (302)
T PF14870_consen 162 SSRGNFYSSWDP---------GQTTWQPHNRN---SSRRIQSMGFSPDGNLWMLARGGQIQFSDDPD----DGETWSEPI 225 (302)
T ss_dssp ETTSSEEEEE-T---------T-SS-EEEE-----SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TT----EEEEE---B
T ss_pred ECcccEEEEecC---------CCccceEEccC---ccceehhceecCCCCEEEEeCCcEEEEccCCC----Ccccccccc
Confidence 877666667753 12335444332 34668889999988766666778777654111 011111111
Q ss_pred ecccccCcceeEEEecCCCcceEEEecCCCeE
Q 018675 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMI 343 (352)
Q Consensus 312 ~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i 343 (352)
.....-...+.+++|.|++. +.|.|+ .|.+
T Consensus 226 ~~~~~~~~~~ld~a~~~~~~-~wa~gg-~G~l 255 (302)
T PF14870_consen 226 IPIKTNGYGILDLAYRPPNE-IWAVGG-SGTL 255 (302)
T ss_dssp -TTSS--S-EEEEEESSSS--EEEEES-TT-E
T ss_pred CCcccCceeeEEEEecCCCC-EEEEeC-CccE
Confidence 11222345689999998765 566555 4544
No 373
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=93.81 E-value=0.25 Score=28.52 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=26.1
Q ss_pred cceeEEEecCCCc--ceEEEecCCCeEEEEeecc
Q 018675 319 MDVNSVQWSPGER--RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 319 ~~i~~~~~sp~~~--~~l~s~~~Dg~i~iw~~~~ 350 (352)
+.|.++.|||.+. .+|+-+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 3588999998654 5888888889999999984
No 374
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=93.78 E-value=4.9 Score=36.13 Aligned_cols=105 Identities=16% Similarity=0.274 Sum_probs=55.7
Q ss_pred ceEEEEECCCCCEEEEEe-----------CCC-cEEEEEccCC--ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCc
Q 018675 76 TVRSCAWSPSGKLLATAS-----------FDA-TTCIWEDVGG--DYECVATLEGHENEVKSVSWNASGTLLATCGRDKS 141 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~-----------~d~-~i~i~~~~~~--~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~ 141 (352)
....++|.++|+++++-. ..+ .|.++++.++ .......+...-...+.+++.+++ ++++ +...-
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~-~~~~i 92 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA-TPPDI 92 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe-CCCeE
Confidence 346788999999887653 123 6777765432 222222332223456788888888 5554 44432
Q ss_pred EEEEecCCCC----eeEEE-EEeec----CccCeeEEEEcCCCCEEEEEe
Q 018675 142 VWIWEVMPGN----EFECV-SVLQG----HAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 142 v~vwd~~~~~----~~~~~-~~~~~----h~~~v~~~~~~~~~~~l~s~~ 182 (352)
.++.|..... ..+.+ ..+.. +......+.|.|++.+.++-+
T Consensus 93 ~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 93 LFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred EEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 2333432111 11222 22221 123466788999988766544
No 375
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=93.73 E-value=4.2 Score=35.25 Aligned_cols=284 Identities=10% Similarity=0.132 Sum_probs=119.9
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecc-eecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM-HTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
...+.+|.|...+ .-++. +..+++ +....+.+.|.....-... -.-..+++.|..+ ..+++ +..+.+.
T Consensus 16 ~~~l~dV~F~d~~------~G~~V-G~~g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~iv-G~~g~ll 84 (302)
T PF14870_consen 16 DKPLLDVAFVDPN------HGWAV-GAYGTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWIV-GEPGLLL 84 (302)
T ss_dssp SS-EEEEEESSSS-------EEEE-ETTTEE--EEESSTTSS-EE-----S-----EEEEEEEETT-EEEEE-EETTEEE
T ss_pred CCceEEEEEecCC------EEEEE-ecCCEE--EEECCCCccccccccCCCccceeeEEEEEecCC-ceEEE-cCCceEE
Confidence 3478899997432 23444 455543 4444555556543211110 0124567777643 44444 4455443
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
.-.+....+..+.....-.+....+....++...+ ++..+.|.. ....+...+.+ ...-...+..+..++++.+++
T Consensus 85 ~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l-~~~~G~iy~-T~DgG~tW~~~--~~~~~gs~~~~~r~~dG~~va 160 (302)
T PF14870_consen 85 HTTDGGKTWERVPLSSKLPGSPFGITALGDGSAEL-AGDRGAIYR-TTDGGKTWQAV--VSETSGSINDITRSSDGRYVA 160 (302)
T ss_dssp EESSTTSS-EE----TT-SS-EEEEEEEETTEEEE-EETT--EEE-ESSTTSSEEEE--E-S----EEEEEE-TTS-EEE
T ss_pred EecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEE-EcCCCcEEE-eCCCCCCeeEc--ccCCcceeEeEEECCCCcEEE
Confidence 33333333333321111222333333333333333 344454322 22333343322 222335677778889999887
Q ss_pred EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCcccee
Q 018675 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRH 259 (352)
Q Consensus 180 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (352)
+++.-....-|+... ..|...... -...|.++.|.|++.+.+.+ ..|.|++=+.... ...|..
T Consensus 161 vs~~G~~~~s~~~G~---~~w~~~~r~------~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~-------~~~w~~ 223 (302)
T PF14870_consen 161 VSSRGNFYSSWDPGQ---TTWQPHNRN------SSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDD-------GETWSE 223 (302)
T ss_dssp EETTSSEEEEE-TT----SS-EEEE--------SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTE-------EEEE--
T ss_pred EECcccEEEEecCCC---ccceEEccC------ccceehhceecCCCCEEEEe-CCcEEEEccCCCC-------cccccc
Confidence 776555556674322 223332221 24679999999998876644 7888887751100 111221
Q ss_pred eEEeec-ccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEec
Q 018675 260 LCTISG-YHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 338 (352)
Q Consensus 260 ~~~~~~-~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~ 338 (352)
.. ... ...-.+..+++.+++.+-+++..|++.+=... ++...+. .....-...++.+.|.++++ -++ .|
T Consensus 224 ~~-~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~S~Dg------GktW~~~-~~~~~~~~n~~~i~f~~~~~-gf~-lG 293 (302)
T PF14870_consen 224 PI-IPIKTNGYGILDLAYRPPNEIWAVGGSGTLLVSTDG------GKTWQKD-RVGENVPSNLYRIVFVNPDK-GFV-LG 293 (302)
T ss_dssp -B--TTSS--S-EEEEEESSSS-EEEEESTT-EEEESST------TSS-EE--GGGTTSSS---EEEEEETTE-EEE-E-
T ss_pred cc-CCcccCceeeEEEEecCCCCEEEEeCCccEEEeCCC------CccceEC-ccccCCCCceEEEEEcCCCc-eEE-EC
Confidence 00 000 11223677888887755555566655442111 1222211 11122345789999976554 454 67
Q ss_pred CCCeEEEE
Q 018675 339 DDGMIKIW 346 (352)
Q Consensus 339 ~Dg~i~iw 346 (352)
.||.|.-|
T Consensus 294 ~~G~ll~~ 301 (302)
T PF14870_consen 294 QDGVLLRY 301 (302)
T ss_dssp STTEEEEE
T ss_pred CCcEEEEe
Confidence 79988655
No 376
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.20 E-value=4.7 Score=34.19 Aligned_cols=103 Identities=17% Similarity=0.260 Sum_probs=61.8
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCe-EEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC-----CcEE
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKT-VRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD-----ATTC 99 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~-v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----~~i~ 99 (352)
.|+++|.. +.-++-+-.=|+ ..++|.......-..... +..| .--.-.|||||++|-..-+| |.|-
T Consensus 72 gi~~~p~~-----~ravafARrPGtf~~vfD~~~~~~pv~~~s~-~~RH--fyGHGvfs~dG~~LYATEndfd~~rGViG 143 (366)
T COG3490 72 GIAFHPAL-----PRAVAFARRPGTFAMVFDPNGAQEPVTLVSQ-EGRH--FYGHGVFSPDGRLLYATENDFDPNRGVIG 143 (366)
T ss_pred CeecCCCC-----cceEEEEecCCceEEEECCCCCcCcEEEecc-cCce--eecccccCCCCcEEEeecCCCCCCCceEE
Confidence 47788753 122333333343 445676655432221111 1111 22234699999988765444 5688
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG 137 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 137 (352)
+||.. .....+..+.+|.-....+.|.+||..++.+.
T Consensus 144 vYd~r-~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 144 VYDAR-EGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred EEecc-cccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 99865 34556677778877888999999999887664
No 377
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=92.71 E-value=7.2 Score=36.61 Aligned_cols=115 Identities=10% Similarity=0.187 Sum_probs=65.2
Q ss_pred ceEEEEECCC----CCEEEEEeCCCcEEEEEccCCce---eeeEeeccc-cC----CeeEEEECCCCcEEEEeeCCCcEE
Q 018675 76 TVRSCAWSPS----GKLLATASFDATTCIWEDVGGDY---ECVATLEGH-EN----EVKSVSWNASGTLLATCGRDKSVW 143 (352)
Q Consensus 76 ~v~~~~~s~~----~~~l~s~~~d~~i~i~~~~~~~~---~~~~~~~~h-~~----~v~~v~~~~~~~~l~s~~~d~~v~ 143 (352)
.|..++|.|- -..|+...-...+.+|....... +....-.++ .+ --..+.|+|....|+.-.....-.
T Consensus 58 hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV 137 (671)
T PF15390_consen 58 HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSV 137 (671)
T ss_pred eeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeE
Confidence 5889999984 33555556667899997542111 111111111 11 123677999888766555444334
Q ss_pred EEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC-cEEEEec
Q 018675 144 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-TIKVWWA 192 (352)
Q Consensus 144 vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-~i~iw~~ 192 (352)
+++++.... .....++ ....|.|.+|.+||+.|+.+-... .-.|||-
T Consensus 138 ~~sV~~d~s-rVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 138 LPSVHCDSS-RVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred eeeeeeCCc-eEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence 566543332 2223333 345789999999999877664432 3457754
No 378
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=92.55 E-value=0.14 Score=49.54 Aligned_cols=203 Identities=17% Similarity=0.205 Sum_probs=104.7
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeee--eccee---cceEEEEECCCCCEEEE
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL--EEMHT---RTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~--~~~h~---~~v~~~~~s~~~~~l~s 91 (352)
++|-.+.|-.+.|-..+ .+.++ -.-|.+.||+++--.....+...+ +.-.. ..|.-|-|-++.-++..
T Consensus 128 ~kgf~G~v~dl~fah~~-----~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~ 200 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTK-----CPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICY 200 (1283)
T ss_pred HhcCCCCcccccccccC-----ChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeee
Confidence 45667777777775433 12222 223778899865321111111111 11111 23333444446666777
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEE-----------ECCCCcEEEEeeCCCcEEEEecCCCC--eeEEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVS-----------WNASGTLLATCGRDKSVWIWEVMPGN--EFECVSV 158 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~-----------~~~~~~~l~s~~~d~~v~vwd~~~~~--~~~~~~~ 158 (352)
+-.++++++....+.. ...+.+|...+..++ .+|||..|+.+..||.+++|.+.... ...|++.
T Consensus 201 ~~~~~~i~lL~~~ra~---~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhe 277 (1283)
T KOG1916|consen 201 GLKGGEIRLLNINRAL---RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHE 277 (1283)
T ss_pred ccCCCceeEeeechHH---HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhc
Confidence 7778888876544321 122344655544332 58999999999999999999864322 1223344
Q ss_pred eecCcc--CeeEEEEcCC---------CCEEEEEeC-CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC
Q 018675 159 LQGHAQ--DVKMVQWHPT---------MDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226 (352)
Q Consensus 159 ~~~h~~--~v~~~~~~~~---------~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~ 226 (352)
.+.|.. .++.+ ++.+ ..++++++. .+.+++| ....|+|.... . ...|..+. -+++
T Consensus 278 wkphd~~p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k~w-----~~a~w~Cll~~--~----~d~v~iV~-p~~~ 344 (1283)
T KOG1916|consen 278 WKPHDKHPRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEKFW-----AEAPWQCLLDK--L----IDGVQIVG-PHDG 344 (1283)
T ss_pred cCCCCCCCceeee-eccccccCCccceeEEEEecccCCcceeEe-----eccchhhhhhh--c----ccceEeec-CCCc
Confidence 444441 22222 3221 123455544 5678888 34456665211 1 12344444 2333
Q ss_pred C------------EEEEEeCCCcEEEEc
Q 018675 227 D------------KLVSCSDDLTIKIWG 242 (352)
Q Consensus 227 ~------------~l~s~~~dg~i~iwd 242 (352)
. .+++-.-++.|++|.
T Consensus 345 ~v~~~~~~~~~~~~~v~r~v~~~i~~~q 372 (1283)
T KOG1916|consen 345 EVTDLSMCQWMTTRLVSRSVDGTIKIWQ 372 (1283)
T ss_pred cccchhhhHHHHHHHHHhhhHHHHHHhh
Confidence 2 134456678888885
No 379
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=91.99 E-value=9.6 Score=34.83 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=24.2
Q ss_pred CcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 318 DMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 318 ~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.+++..++.||+++ ++|--..+|.+.|.+..
T Consensus 216 ~~~i~~iavSpng~-~iAl~t~~g~l~v~ssD 246 (410)
T PF04841_consen 216 DGPIIKIAVSPNGK-FIALFTDSGNLWVVSSD 246 (410)
T ss_pred CCCeEEEEECCCCC-EEEEEECCCCEEEEECc
Confidence 35799999999987 56777778888777643
No 380
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=91.92 E-value=8.8 Score=34.24 Aligned_cols=139 Identities=18% Similarity=0.276 Sum_probs=65.1
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeee-------------eecceecceEEEEECCCCC
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV-------------LEEMHTRTVRSCAWSPSGK 87 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~-------------~~~~h~~~v~~~~~s~~~~ 87 (352)
...+....|+|+ +..+|-. .++.|.+++..++... ..... .++.--+.-.++.|||||+
T Consensus 42 ~~~~~~~~~sP~------g~~~~~v-~~~nly~~~~~~~~~~-~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~ 113 (353)
T PF00930_consen 42 PPKLQDAKWSPD------GKYIAFV-RDNNLYLRDLATGQET-QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSK 113 (353)
T ss_dssp ETTBSEEEE-SS------STEEEEE-ETTEEEEESSTTSEEE-ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSS
T ss_pred ccccccceeecC------CCeeEEE-ecCceEEEECCCCCeE-EeccccceeEEcCccceeccccccccccceEECCCCC
Confidence 456778899997 3455554 4678888876554211 11100 0000001225688999999
Q ss_pred EEEEEeCC-CcEEEEEccCCceeeeEeeccccC---CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe---e
Q 018675 88 LLATASFD-ATTCIWEDVGGDYECVATLEGHEN---EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL---Q 160 (352)
Q Consensus 88 ~l~s~~~d-~~i~i~~~~~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~---~ 160 (352)
.||....| ..+..+... ....... .+..+.+-.-|.--.. -.+.++|+..++... +... .
T Consensus 114 ~la~~~~d~~~v~~~~~~--------~~~~~~~~yp~~~~~~YPk~G~~np~----v~l~v~~~~~~~~~~-~~~~~~~~ 180 (353)
T PF00930_consen 114 YLAFLRFDEREVPEYPLP--------DYSPPDSQYPEVESIRYPKAGDPNPR----VSLFVVDLASGKTTE-LDPPNSLN 180 (353)
T ss_dssp EEEEEEEE-TTS-EEEEE--------EESSSTESS-EEEEEE--BTTS---E----EEEEEEESSSTCCCE-E---HHHH
T ss_pred EEEEEEECCcCCceEEee--------ccCCccccCCcccccccCCCCCcCCc----eEEEEEECCCCcEEE-eeeccccC
Confidence 99877654 333332211 1111111 2444444222222111 135667776554321 2211 2
Q ss_pred cCccCeeEEEEcCCCCEEEE
Q 018675 161 GHAQDVKMVQWHPTMDVLFS 180 (352)
Q Consensus 161 ~h~~~v~~~~~~~~~~~l~s 180 (352)
.-..-+..+.|.+++..++.
T Consensus 181 ~~~~yl~~v~W~~d~~~l~~ 200 (353)
T PF00930_consen 181 PQDYYLTRVGWSPDGKRLWV 200 (353)
T ss_dssp TSSEEEEEEEEEETTEEEEE
T ss_pred CCccCcccceecCCCcEEEE
Confidence 22345778899998874443
No 381
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=91.81 E-value=8.2 Score=33.65 Aligned_cols=230 Identities=13% Similarity=0.086 Sum_probs=101.7
Q ss_pred ECCCCCE-EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe-
Q 018675 82 WSPSGKL-LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL- 159 (352)
Q Consensus 82 ~s~~~~~-l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~- 159 (352)
|.++... +.+--..+.|.-|+..++... .+. +.+.+.++..-..+..|+++.. + +.+++...+.....+...
T Consensus 32 w~~~~~~L~w~DI~~~~i~r~~~~~g~~~---~~~-~p~~~~~~~~~d~~g~Lv~~~~-g-~~~~~~~~~~~~t~~~~~~ 105 (307)
T COG3386 32 WDPDRGALLWVDILGGRIHRLDPETGKKR---VFP-SPGGFSSGALIDAGGRLIACEH-G-VRLLDPDTGGKITLLAEPE 105 (307)
T ss_pred CcCCCCEEEEEeCCCCeEEEecCCcCceE---EEE-CCCCcccceeecCCCeEEEEcc-c-cEEEeccCCceeEEecccc
Confidence 4555543 334444566666766544322 111 2233444443333445554443 2 445665433321222111
Q ss_pred ecCc-cCeeEEEEcCCCCEEEEEeCC---C------cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 160 QGHA-QDVKMVQWHPTMDVLFSCSYD---N------TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 160 ~~h~-~~v~~~~~~~~~~~l~s~~~d---~------~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
.+.. ...+.+...|++.+.++.... + .=.+|.+.... ... .....+-..-+.|+||||++.|
T Consensus 106 ~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g----~~~----~l~~~~~~~~NGla~SpDg~tl 177 (307)
T COG3386 106 DGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDG----GVV----RLLDDDLTIPNGLAFSPDGKTL 177 (307)
T ss_pred CCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCC----CEE----EeecCcEEecCceEECCCCCEE
Confidence 1111 234566777888765543330 0 11233322100 001 1111233455689999999766
Q ss_pred EEEe-CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEE-ecCCCC-eEEEEEccCCccccCcc
Q 018675 230 VSCS-DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIA-SGAADD-SVQFFVESKDDLIDGPS 306 (352)
Q Consensus 230 ~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-s~~~d~-~v~~~~~~~~~~~~~~~ 306 (352)
.... ..+.|.-|+++..... ..-+.............-.++.+.++.+- ++..+| .+..|....
T Consensus 178 y~aDT~~~~i~r~~~d~~~g~-----~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG-------- 244 (307)
T COG3386 178 YVADTPANRIHRYDLDPATGP-----IGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPDG-------- 244 (307)
T ss_pred EEEeCCCCeEEEEecCcccCc-----cCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCCC--------
Confidence 6554 4577877776521100 00001111111112223334445555333 444443 677775432
Q ss_pred cceeeecccccCcceeEEEe-cCCCcceEEEecCC
Q 018675 307 YKMLLKKEKAHDMDVNSVQW-SPGERRLLASASDD 340 (352)
Q Consensus 307 ~~~~~~~~~~h~~~i~~~~~-sp~~~~~l~s~~~D 340 (352)
.++.+..-....+++++| .|+.+.|++|+...
T Consensus 245 --~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~ 277 (307)
T COG3386 245 --KLLGEIKLPVKRPTNPAFGGPDLNTLYITSARS 277 (307)
T ss_pred --cEEEEEECCCCCCccceEeCCCcCEEEEEecCC
Confidence 111111112246788888 45556677776655
No 382
>PRK13684 Ycf48-like protein; Provisional
Probab=91.41 E-value=9.7 Score=33.71 Aligned_cols=284 Identities=11% Similarity=0.138 Sum_probs=129.1
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
...+++|.|.... .-++.+ .++. ||...++.+.|+....-......+++++.|.++ ...++ +..+.+..
T Consensus 45 ~~~l~~v~F~d~~------~g~avG-~~G~--il~T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~~~-G~~g~i~~ 113 (334)
T PRK13684 45 EANLLDIAFTDPN------HGWLVG-SNRT--LLETNDGGETWEERSLDLPEENFRLISISFKGD-EGWIV-GQPSLLLH 113 (334)
T ss_pred CCceEEEEEeCCC------cEEEEE-CCCE--EEEEcCCCCCceECccCCcccccceeeeEEcCC-cEEEe-CCCceEEE
Confidence 4578889887432 335554 4443 454444444454321100011234778888754 33443 45555543
Q ss_pred EEccCCceeeeEeeccccCCeeEE-EECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 101 WEDVGGDYECVATLEGHENEVKSV-SWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~~~v~~v-~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
-.+....+..+.......+....+ ...+ +..++ ++..+.|.. ....++....+.. .-...+..+.+.|++.++
T Consensus 114 S~DgG~tW~~~~~~~~~~~~~~~i~~~~~-~~~~~-~g~~G~i~~-S~DgG~tW~~~~~--~~~g~~~~i~~~~~g~~v- 187 (334)
T PRK13684 114 TTDGGKNWTRIPLSEKLPGSPYLITALGP-GTAEM-ATNVGAIYR-TTDGGKNWEALVE--DAAGVVRNLRRSPDGKYV- 187 (334)
T ss_pred ECCCCCCCeEccCCcCCCCCceEEEEECC-Cccee-eeccceEEE-ECCCCCCceeCcC--CCcceEEEEEECCCCeEE-
Confidence 333222333221110111111122 2222 22233 344444322 1223333332221 113456778888887655
Q ss_pred EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCcccee
Q 018675 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRH 259 (352)
Q Consensus 180 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (352)
..+..|.+..- .+....+|..... .-...++++.+.+++..++.+ ..|.+++=+. ++-..|..
T Consensus 188 ~~g~~G~i~~s--~~~gg~tW~~~~~------~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~--------d~G~sW~~ 250 (334)
T PRK13684 188 AVSSRGNFYST--WEPGQTAWTPHQR------NSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDP--------DDLESWSK 250 (334)
T ss_pred EEeCCceEEEE--cCCCCCeEEEeeC------CCcccceeeeEcCCCCEEEEe-cCCEEEEccC--------CCCCcccc
Confidence 44455544321 1111223433211 234578899999998876665 4576643211 11223432
Q ss_pred eEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecC
Q 018675 260 LCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 339 (352)
Q Consensus 260 ~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~ 339 (352)
...-.......++.+.+.+++.+.+++.+|.+..-... +..+..+. ....-....+.+.|..+++ .++ .|.
T Consensus 251 ~~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~~S~d~------G~tW~~~~-~~~~~~~~~~~~~~~~~~~-~~~-~G~ 321 (334)
T PRK13684 251 PIIPEITNGYGYLDLAYRTPGEIWAGGGNGTLLVSKDG------GKTWEKDP-VGEEVPSNFYKIVFLDPEK-GFV-LGQ 321 (334)
T ss_pred ccCCccccccceeeEEEcCCCCEEEEcCCCeEEEeCCC------CCCCeECC-cCCCCCcceEEEEEeCCCc-eEE-ECC
Confidence 11100001234566777777666666677766542111 11111110 0011224678888876554 454 677
Q ss_pred CCeEEEEe
Q 018675 340 DGMIKIWE 347 (352)
Q Consensus 340 Dg~i~iw~ 347 (352)
.|.|.-|+
T Consensus 322 ~G~il~~~ 329 (334)
T PRK13684 322 RGVLLRYV 329 (334)
T ss_pred CceEEEec
Confidence 88887765
No 383
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=91.30 E-value=8.1 Score=32.61 Aligned_cols=198 Identities=14% Similarity=0.175 Sum_probs=89.8
Q ss_pred eeEEEECCCCcEEEEeeCCC--cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q 018675 121 VKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 121 v~~v~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 198 (352)
...+.|..++.++-+.+.-| .|+.+|+..++..... .+.. ...--.++.. .+....-...++...+||..
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~-~l~~-~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~----- 118 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSV-PLPP-RYFGEGITIL-GDKLYQLTWKEGTGFVYDPN----- 118 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEE-E-TT-T--EEEEEEE-TTEEEEEESSSSEEEEEETT-----
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEE-ECCc-cccceeEEEE-CCEEEEEEecCCeEEEEccc-----
Confidence 34666767778888887766 6777887766533221 1211 1111223332 22334445567888888643
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCC----ccceeeEEeecccCcceEEE
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGY----ASWRHLCTISGYHDRTIFSV 274 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~ 274 (352)
+++.+.++.- ...=|.|+ .+++.|+.+....++.++|.+..+....... .....+..+. +..+.|++-
T Consensus 119 tl~~~~~~~y-----~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE-~i~G~IyAN 190 (264)
T PF05096_consen 119 TLKKIGTFPY-----PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELE-YINGKIYAN 190 (264)
T ss_dssp TTEEEEEEE------SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEE-EETTEEEEE
T ss_pred cceEEEEEec-----CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEE-EEcCEEEEE
Confidence 3444444432 12345666 4566677666677888888542211100000 0000111111 123445555
Q ss_pred EecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEec
Q 018675 275 HWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 338 (352)
Q Consensus 275 ~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~ 338 (352)
.|..+.++..-...|.|.-|..-. .+... .........-..=.+.||+.|....+++||-
T Consensus 191 VW~td~I~~Idp~tG~V~~~iDls-~L~~~---~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 191 VWQTDRIVRIDPETGKVVGWIDLS-GLRPE---VGRDKSRQPDDDVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp ETTSSEEEEEETTT-BEEEEEE-H-HHHHH---HTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred eCCCCeEEEEeCCCCeEEEEEEhh-Hhhhc---ccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence 555444444444455444331100 00000 0000000111345899999998888998884
No 384
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=90.85 E-value=5.2 Score=35.37 Aligned_cols=112 Identities=19% Similarity=0.294 Sum_probs=55.6
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe----ecCccCeeEEEEcCC---CCEEEEEeC-C------C
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL----QGHAQDVKMVQWHPT---MDVLFSCSY-D------N 185 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~----~~h~~~v~~~~~~~~---~~~l~s~~~-d------~ 185 (352)
..++++|.|++.+|++ -..|.|++.+ ..+.....+... .........++++|+ ...|..... . .
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 4578999999988775 5589999988 333321222222 223346788999995 233333222 1 1
Q ss_pred --cEEEEecCCCCCCCceeEeee---ecc--CCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 186 --TIKVWWAEDTDSDNWHCVQTI---SES--NNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 186 --~i~iw~~~~~~~~~~~~~~~~---~~~--~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
.|.-|..... .........+ ... ...| .-..|.|.|+|.++++.+..+
T Consensus 81 ~~~v~r~~~~~~-~~~~~~~~~l~~~~p~~~~~~H--~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 81 DNRVVRFTLSDG-DGDLSSEEVLVTGLPDTSSGNH--NGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEEETT-SCEEEEEEEEEEEEES-CSSSS---EEEEEE-TTSEEEEEEB-TT
T ss_pred ceeeEEEeccCC-ccccccceEEEEEeCCCCCCCC--CCccccCCCCCcEEEEeCCCC
Confidence 2322322221 0111111111 111 1234 345699999998888776544
No 385
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=90.76 E-value=13 Score=33.83 Aligned_cols=184 Identities=7% Similarity=0.033 Sum_probs=92.7
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEEEEEeCCCcEEEEEccCCceeeeEeeccc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLLATASFDATTCIWEDVGGDYECVATLEGH 117 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h 117 (352)
..++.+..++.+.-+|..+++..|+............ .-+| .+..++.++.++.+..+|..+++..=...+...
T Consensus 161 ~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~----~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~ 236 (394)
T PRK11138 161 GLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRG----ESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQP 236 (394)
T ss_pred CEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccC----CCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccC
Confidence 3456667789999999999888887542110000000 0011 123455677788888777766542100111000
Q ss_pred cC-----CeeEEEECC--CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 118 EN-----EVKSVSWNA--SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190 (352)
Q Consensus 118 ~~-----~v~~v~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw 190 (352)
.+ ....+.-+| .+..++.++.++.+...|...++.. .... ......+. ..+..++.++.++.+..+
T Consensus 237 ~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~---W~~~--~~~~~~~~--~~~~~vy~~~~~g~l~al 309 (394)
T PRK11138 237 TGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIV---WKRE--YGSVNDFA--VDGGRIYLVDQNDRVYAL 309 (394)
T ss_pred CCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEE---Eeec--CCCccCcE--EECCEEEEEcCCCeEEEE
Confidence 00 000111122 2456667778899999998766431 1111 11111111 134567777888888888
Q ss_pred ecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
+..... ..|... .+.. .....++ . .+.++..++.||.+...|.+
T Consensus 310 d~~tG~-~~W~~~-~~~~--~~~~sp~----v--~~g~l~v~~~~G~l~~ld~~ 353 (394)
T PRK11138 310 DTRGGV-ELWSQS-DLLH--RLLTAPV----L--YNGYLVVGDSEGYLHWINRE 353 (394)
T ss_pred ECCCCc-EEEccc-ccCC--CcccCCE----E--ECCEEEEEeCCCEEEEEECC
Confidence 765431 112110 0000 0011111 1 25677888999999998864
No 386
>PHA02713 hypothetical protein; Provisional
Probab=90.70 E-value=5.3 Score=38.16 Aligned_cols=145 Identities=8% Similarity=0.168 Sum_probs=68.9
Q ss_pred ccEEEEeeCCC-----eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC-----------------
Q 018675 39 APVFASCSGDK-----TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA----------------- 96 (352)
Q Consensus 39 ~~~l~s~s~D~-----~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~----------------- 96 (352)
+.+.+.||.++ ++..||..+. .|........ .......+ .-+|++.+.|+.++
T Consensus 352 g~IYviGG~~~~~~~~sve~Ydp~~~--~W~~~~~mp~-~r~~~~~~--~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~ 426 (557)
T PHA02713 352 DTIYAIGGQNGTNVERTIECYTMGDD--KWKMLPDMPI-ALSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEE 426 (557)
T ss_pred CEEEEECCcCCCCCCceEEEEECCCC--eEEECCCCCc-ccccccEE--EECCEEEEEeCCCcccccccccccccccccc
Confidence 35556666553 4677776654 2443221110 00011111 22678888887653
Q ss_pred ------cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC------cEEEEecCCCCeeEEEEEeecCcc
Q 018675 97 ------TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK------SVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 97 ------~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~------~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
++..||..+..+..+..+.........+. -++...+.||.++ .+-.||....+.+..+..+.....
T Consensus 427 ~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~--~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~ 504 (557)
T PHA02713 427 DTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVS--HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLS 504 (557)
T ss_pred cccccceEEEECCCCCeEeecCCCCcccccCcEEE--ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccc
Confidence 35667777666654443322111111222 2456666666542 355677654123333333322221
Q ss_pred CeeEEEEcCCCCEEEEEeCCC--cEEEEec
Q 018675 165 DVKMVQWHPTMDVLFSCSYDN--TIKVWWA 192 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~~~d~--~i~iw~~ 192 (352)
....+.+ ++...+.|+.++ .+..||.
T Consensus 505 ~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 505 ALHTILH--DNTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred cceeEEE--CCEEEEEeeecceeehhhcCc
Confidence 2222222 567778888887 5555643
No 387
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.59 E-value=5.8 Score=35.98 Aligned_cols=102 Identities=15% Similarity=0.280 Sum_probs=66.6
Q ss_pred eecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeee--EeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECV--ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
.+++|.++.||+|.+.||.--.|.++.+++....+.... .+.+..+..|..+.|..+.+ ++--...| +-+|...+.
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e-~A~i~~~G-~e~y~v~pe 142 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTE-IAFITDQG-IEFYQVLPE 142 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCee-EEEEecCC-eEEEEEchh
Confidence 457999999999999999999999999987643322211 12222344588889977644 34344334 667776443
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVL 178 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l 178 (352)
. ..++..+.|.-+|+...|.++-..+
T Consensus 143 k--rslRlVks~~~nvnWy~yc~et~v~ 168 (657)
T KOG2377|consen 143 K--RSLRLVKSHNLNVNWYMYCPETAVI 168 (657)
T ss_pred h--hhhhhhhhcccCccEEEEccccceE
Confidence 2 2234445677788888888876543
No 388
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=90.16 E-value=1 Score=25.28 Aligned_cols=28 Identities=25% Similarity=0.522 Sum_probs=21.4
Q ss_pred cceeEEEecCCCcceEEEecCC--CeEEEE
Q 018675 319 MDVNSVQWSPGERRLLASASDD--GMIKIW 346 (352)
Q Consensus 319 ~~i~~~~~sp~~~~~l~s~~~D--g~i~iw 346 (352)
..-...+|||||++++.+...+ |.-.||
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 4566788999999888788887 777776
No 389
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=89.61 E-value=1.4 Score=25.48 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=24.1
Q ss_pred CCeeEEEECCCC---cEEEEeeCCCcEEEEecCC
Q 018675 119 NEVKSVSWNASG---TLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 119 ~~v~~v~~~~~~---~~l~s~~~d~~v~vwd~~~ 149 (352)
++|+++.|+|.+ ++|+-+-.-+.|.++|++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 478999999744 4777776678899999873
No 390
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=89.05 E-value=13 Score=31.58 Aligned_cols=146 Identities=11% Similarity=0.123 Sum_probs=77.1
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE-------
Q 018675 85 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS------- 157 (352)
Q Consensus 85 ~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~------- 157 (352)
.++.|+.|..+| +.+++.... ....... +...|..+...+.-+.|+.-+ |+.+.++++..-.......
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~-~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDP-SKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCC-ccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 567889998888 777776221 1112222 223488888888777666554 4999999974322111000
Q ss_pred ----EeecCccCeeEEE--EcCCCCEEEEEeCCCcEEEEecCCCCCCCc-eeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 158 ----VLQGHAQDVKMVQ--WHPTMDVLFSCSYDNTIKVWWAEDTDSDNW-HCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 158 ----~~~~h~~~v~~~~--~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~-~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
........+...+ -.+.+...+.....+.|.+|...... ..+ ...+++. ....+.+++|. ++.++
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~-~~f~~~~ke~~-----lp~~~~~i~~~--~~~i~ 152 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPR-NSFSKLLKEIS-----LPDPPSSIAFL--GNKIC 152 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCc-ccccceeEEEE-----cCCCcEEEEEe--CCEEE
Confidence 0011122333333 11233333344445588888665421 122 2233332 23567888888 45566
Q ss_pred EEeCCCcEEEEcCC
Q 018675 231 SCSDDLTIKIWGAD 244 (352)
Q Consensus 231 s~~~dg~i~iwd~~ 244 (352)
.|..++ ..+.|++
T Consensus 153 v~~~~~-f~~idl~ 165 (275)
T PF00780_consen 153 VGTSKG-FYLIDLN 165 (275)
T ss_pred EEeCCc-eEEEecC
Confidence 666444 6667665
No 391
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=87.46 E-value=8.1 Score=37.57 Aligned_cols=109 Identities=14% Similarity=0.186 Sum_probs=68.3
Q ss_pred ccEEEEeeCCCeEEEEecCCC----------cee----eeeeeeeecceecceEEEEEC--CCCCEEEEEeCCCcEEEEE
Q 018675 39 APVFASCSGDKTVRIWEQSAS----------SRF----WNCKAVLEEMHTRTVRSCAWS--PSGKLLATASFDATTCIWE 102 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~----------~~~----~~~~~~~~~~h~~~v~~~~~s--~~~~~l~s~~~d~~i~i~~ 102 (352)
...|+.|.+||.|.+|..++- ... ...+-.+......++..+++. ...++||++++...|.||-
T Consensus 114 ~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFa 193 (717)
T PF08728_consen 114 EEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFA 193 (717)
T ss_pred eeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEEE
Confidence 478999999999999964210 000 000011111234577888888 7788999998888888885
Q ss_pred ccCCceeeeE-eeccccCCeeEEEECCC-----Cc-EEEEeeCCCcEEEEec
Q 018675 103 DVGGDYECVA-TLEGHENEVKSVSWNAS-----GT-LLATCGRDKSVWIWEV 147 (352)
Q Consensus 103 ~~~~~~~~~~-~~~~h~~~v~~v~~~~~-----~~-~l~s~~~d~~v~vwd~ 147 (352)
....+..... .-..|...|-+|+|-++ |. .+++++-.|.+.+|++
T Consensus 194 f~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 194 FALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 4321111111 01135567889999653 22 7888899999999887
No 392
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=87.30 E-value=22 Score=32.13 Aligned_cols=187 Identities=13% Similarity=0.150 Sum_probs=105.5
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC---CCcEEEEEccCCceeeeEeecc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF---DATTCIWEDVGGDYECVATLEG 116 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~i~i~~~~~~~~~~~~~~~~ 116 (352)
+.+++...++.+.+.+..+.... ..... ......++++|+++.+-.+.. ++++.+.|..+... ......
T Consensus 87 ~vyv~~~~~~~v~vid~~~~~~~----~~~~v--G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~--~~~~~v 158 (381)
T COG3391 87 KVYVTTGDSNTVSVIDTATNTVL----GSIPV--GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV--TATIPV 158 (381)
T ss_pred eEEEecCCCCeEEEEcCccccee----eEeee--ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE--EEEEec
Confidence 56777777889999885544321 11101 114567899999976655544 67787777665533 222221
Q ss_pred ccCCeeEEEECCCCcEEEEe-eCCCcEEEEecCCCCeeEEEEE---eecCccCeeEEEEcCCCCEEEEEeCC---CcEEE
Q 018675 117 HENEVKSVSWNASGTLLATC-GRDKSVWIWEVMPGNEFECVSV---LQGHAQDVKMVQWHPTMDVLFSCSYD---NTIKV 189 (352)
Q Consensus 117 h~~~v~~v~~~~~~~~l~s~-~~d~~v~vwd~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~i 189 (352)
-..+ ..+++.|+|+.++.+ ..++.+.+.|........ .. ...-...-..+.+.|++..+...-.. +.+..
T Consensus 159 G~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~--~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~ 235 (381)
T COG3391 159 GNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR--GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLK 235 (381)
T ss_pred CCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec--cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEE
Confidence 1223 789999999965555 478899999964332110 00 01111223467788998866554333 46666
Q ss_pred EecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCCc
Q 018675 190 WWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADI 245 (352)
Q Consensus 190 w~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~~ 245 (352)
.+..... ...... ..+-. ....+.++|+|.++... +..+.+.+.|...
T Consensus 236 id~~~~~-----v~~~~~--~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~ 284 (381)
T COG3391 236 IDTATGN-----VTATDL--PVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGAT 284 (381)
T ss_pred EeCCCce-----EEEecc--ccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCC
Confidence 6543321 111100 01111 33457889999887766 3447788887543
No 393
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=87.18 E-value=35 Score=34.32 Aligned_cols=80 Identities=13% Similarity=0.016 Sum_probs=51.6
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeee-eeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA-VLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
..|.|++++|....+...++++.|.++..+++-......... +.. .-...-.++|.-..|-.|..+|.++..||.+..
T Consensus 531 ~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~-~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~ 609 (1096)
T KOG1897|consen 531 YEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILI-THEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLY 609 (1096)
T ss_pred ceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCccee-eeeccCCCccchheeeEEeeccceEEEEEcCCceEEE
Confidence 589999999964333345689999998887776443332111 111 101112356666677777889999999998876
Q ss_pred EE
Q 018675 101 WE 102 (352)
Q Consensus 101 ~~ 102 (352)
|.
T Consensus 610 fv 611 (1096)
T KOG1897|consen 610 FV 611 (1096)
T ss_pred EE
Confidence 64
No 394
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=86.55 E-value=25 Score=32.04 Aligned_cols=121 Identities=8% Similarity=0.123 Sum_probs=59.1
Q ss_pred ceEEEEECCCCCEEEEEeC--------------------CCcEEEEEccCCceeeeEeeccccCCeeEEEEC--CCCcE-
Q 018675 76 TVRSCAWSPSGKLLATASF--------------------DATTCIWEDVGGDYECVATLEGHENEVKSVSWN--ASGTL- 132 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~--------------------d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~~~~- 132 (352)
.-+...+.|..+.++|..+ -.++.+||....+......+......+..|+|. |+..+
T Consensus 182 ~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g 261 (461)
T PF05694_consen 182 FGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG 261 (461)
T ss_dssp ----EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE
T ss_pred CCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce
Confidence 3466777887788887642 257999998876544333343222346677774 54444
Q ss_pred EEEeeCCCcEEEEecCCCCeeEEEE--Eeec-----C------------ccCeeEEEEcCCCCEEEE-EeCCCcEEEEec
Q 018675 133 LATCGRDKSVWIWEVMPGNEFECVS--VLQG-----H------------AQDVKMVQWHPTMDVLFS-CSYDNTIKVWWA 192 (352)
Q Consensus 133 l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~-----h------------~~~v~~~~~~~~~~~l~s-~~~d~~i~iw~~ 192 (352)
|+.+.-..+|..|--.....++... .+.. - ..-++.+..|.|+++|.. .-.+|.++.||+
T Consensus 262 Fvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDI 341 (461)
T PF05694_consen 262 FVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDI 341 (461)
T ss_dssp EEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-
T ss_pred EEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEec
Confidence 5555555556655432233222111 1110 0 123678889999998764 556899999999
Q ss_pred CCCC
Q 018675 193 EDTD 196 (352)
Q Consensus 193 ~~~~ 196 (352)
.+..
T Consensus 342 SDP~ 345 (461)
T PF05694_consen 342 SDPF 345 (461)
T ss_dssp SSTT
T ss_pred CCCC
Confidence 8754
No 395
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=86.37 E-value=24 Score=34.85 Aligned_cols=79 Identities=16% Similarity=0.260 Sum_probs=50.8
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCC--CC-------CCceeEeeee--c--cCCCCcccEEEEEEcCC---CC
Q 018675 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDT--DS-------DNWHCVQTIS--E--SNNGHSSTIWALSFNAK---GD 227 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~--~~-------~~~~~~~~~~--~--~~~~h~~~i~~l~~~~~---~~ 227 (352)
..|..+..+|++..++..|..+...+ .+... .. ....| .+.. . ........|..+.|+|. +.
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~-~LP~r~g~~~~~~~g~~~i~C-rt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVL-ELPRRWGKNGEFEDGKKEINC-RTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEE-EeccccCccccccCCCcceeE-EEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 35778889999999988887664443 33211 00 01111 1111 0 11234568889999996 57
Q ss_pred EEEEEeCCCcEEEEcCC
Q 018675 228 KLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 228 ~l~s~~~dg~i~iwd~~ 244 (352)
.|+.=..|+++|+||+.
T Consensus 163 ~l~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 163 HLVVLTSDNTLRLYDIS 179 (717)
T ss_pred eEEEEecCCEEEEEecC
Confidence 88888999999999985
No 396
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=86.13 E-value=19 Score=30.24 Aligned_cols=119 Identities=15% Similarity=0.118 Sum_probs=69.2
Q ss_pred cCCccceEEEEEccCC-------C--CCC----CccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceE-EEEEC
Q 018675 18 EGHTDRVWSLAWKPTA-------G--VDG----VAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR-SCAWS 83 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~-------~--~~~----~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s 83 (352)
-.|+..+.++.+..-. + .+. .+++++-|-..|-+.+-+..++.+.|+.... +.|. .....
T Consensus 29 gSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~------~~vk~~a~~d 102 (354)
T KOG4649|consen 29 GSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL------ETVKVRAQCD 102 (354)
T ss_pred ecCCceEEEecCCCCcEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeeh------hhhccceEEc
Confidence 3588887777553310 0 000 2467777788888888888888777664321 1121 23457
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEE
Q 018675 84 PSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWI 144 (352)
Q Consensus 84 ~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~v 144 (352)
+++..+-.|+.|++....|..+. .++...+.-.+..-+-+..|-...|..+...|.+.-
T Consensus 103 ~~~glIycgshd~~~yalD~~~~--~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vla 161 (354)
T KOG4649|consen 103 FDGGLIYCGSHDGNFYALDPKTY--GCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLA 161 (354)
T ss_pred CCCceEEEecCCCcEEEeccccc--ceEEecccCCceeccceecCCCceEEEEeccceEEE
Confidence 88999999999999998887654 445554432222223344553333444444454443
No 397
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=85.14 E-value=11 Score=38.22 Aligned_cols=148 Identities=12% Similarity=-0.014 Sum_probs=84.2
Q ss_pred ceEEEEECCCCCEEEEE--eCCCcEEEEEccCCc------eeeeE---eeccccCCeeEEEECCCCc-EEEEeeCCCcEE
Q 018675 76 TVRSCAWSPSGKLLATA--SFDATTCIWEDVGGD------YECVA---TLEGHENEVKSVSWNASGT-LLATCGRDKSVW 143 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~--~~d~~i~i~~~~~~~------~~~~~---~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~ 143 (352)
++......+|+...++. +.+-.|..||...-. ..+++ +......-+.++.|+|.-. ..+.+..|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 45556667777655443 333356677754211 01111 1111112345778888543 366778899999
Q ss_pred EEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 144 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 144 vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
+..+..... .+..+ .-....+++.|+|.+..++.|-..|++.-|.....- ...+.....-....|.+|+|-
T Consensus 182 V~~~~~~~~--~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~lei------k~~ip~Pp~~e~yrvl~v~Wl 252 (1405)
T KOG3630|consen 182 VKSTKQLAQ--NVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEI------KSEIPEPPVEENYRVLSVTWL 252 (1405)
T ss_pred hhhhhhhhh--hhccc-CcccceeeEEeccccceeeEecCCCeEEEeecccce------eecccCCCcCCCcceeEEEEe
Confidence 877642211 11111 233467899999999999999999999888533211 011111111113678999998
Q ss_pred CCCCEEEEE
Q 018675 224 AKGDKLVSC 232 (352)
Q Consensus 224 ~~~~~l~s~ 232 (352)
....+++.-
T Consensus 253 ~t~eflvvy 261 (1405)
T KOG3630|consen 253 STQEFLVVY 261 (1405)
T ss_pred cceeEEEEe
Confidence 777777653
No 398
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=84.84 E-value=7.2 Score=37.21 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=22.0
Q ss_pred cceeEEEecC---CCcceEEEecCCCeEEEEeeccC
Q 018675 319 MDVNSVQWSP---GERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 319 ~~i~~~~~sp---~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.....++.++ ++..++++.+.|+++|+|++.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~ 250 (547)
T PF11715_consen 215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETG 250 (547)
T ss_dssp --EEEEEE-----ETTTEEEEEETTSEEEEEETTTT
T ss_pred CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCC
Confidence 3455566655 23457889999999999999764
No 399
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=84.22 E-value=29 Score=30.61 Aligned_cols=151 Identities=15% Similarity=0.178 Sum_probs=77.3
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecce-EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccc-
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV-RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGH- 117 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v-~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h- 117 (352)
.-|.+-..||++.-..++...+.......+...-..++ ..-++...+..++--+.+|.+.--+...........+.--
T Consensus 148 ~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t 227 (342)
T PF06433_consen 148 RGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLT 227 (342)
T ss_dssp TEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-
T ss_pred CceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccC
Confidence 35777789999999988755433221111111111222 2333444444555567888887776654432222222100
Q ss_pred ---------cCCeeEEEECCCCcEEEEe---eC-----C--CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC-E
Q 018675 118 ---------ENEVKSVSWNASGTLLATC---GR-----D--KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-V 177 (352)
Q Consensus 118 ---------~~~v~~v~~~~~~~~l~s~---~~-----d--~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 177 (352)
.+.-.-+++++..++|+.. +. | ..|+++|+...+. +..+.. ..++.+++.+.+.+ +
T Consensus 228 ~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~kr---v~Ri~l-~~~~~Si~Vsqd~~P~ 303 (342)
T PF06433_consen 228 DAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKR---VARIPL-EHPIDSIAVSQDDKPL 303 (342)
T ss_dssp HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEE---EEEEEE-EEEESEEEEESSSS-E
T ss_pred ccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeE---EEEEeC-CCccceEEEccCCCcE
Confidence 1222345666544443332 11 1 2567777765432 333321 13577888887755 6
Q ss_pred EEEEe-CCCcEEEEecCC
Q 018675 178 LFSCS-YDNTIKVWWAED 194 (352)
Q Consensus 178 l~s~~-~d~~i~iw~~~~ 194 (352)
|++.+ .++.+.+||...
T Consensus 304 L~~~~~~~~~l~v~D~~t 321 (342)
T PF06433_consen 304 LYALSAGDGTLDVYDAAT 321 (342)
T ss_dssp EEEEETTTTEEEEEETTT
T ss_pred EEEEcCCCCeEEEEeCcC
Confidence 65554 578999998654
No 400
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.70 E-value=2.4 Score=42.59 Aligned_cols=102 Identities=19% Similarity=0.215 Sum_probs=64.6
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
.+.++.|.|.- ....|.+..|+.|++..+.-.... +.. ..-...+++++|+|-|+.++.|-..|++.-|.
T Consensus 157 f~~~~~wnP~v-----p~n~av~l~dlsl~V~~~~~~~~~--v~s---~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~ 226 (1405)
T KOG3630|consen 157 FQLKNVWNPLV-----PLNSAVDLSDLSLRVKSTKQLAQN--VTS---FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYE 226 (1405)
T ss_pred ccccccccCCc-----cchhhhhccccchhhhhhhhhhhh--hcc---cCcccceeeEEeccccceeeEecCCCeEEEee
Confidence 44577888853 346777889999998765422110 000 11345789999999999999999999999885
Q ss_pred ccCCceeeeE-eec-cccCCeeEEEECCCCcEEEE
Q 018675 103 DVGGDYECVA-TLE-GHENEVKSVSWNASGTLLAT 135 (352)
Q Consensus 103 ~~~~~~~~~~-~~~-~h~~~v~~v~~~~~~~~l~s 135 (352)
..- +..... ... .....|.+|+|-..-.+++.
T Consensus 227 P~l-eik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 227 PSL-EIKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred ccc-ceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 422 211111 110 11467899999766666554
No 401
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=83.69 E-value=48 Score=32.80 Aligned_cols=75 Identities=19% Similarity=0.343 Sum_probs=51.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccC---------C--ceeeeEe-------eccccCCeeEEEECCC---CcEEE
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVG---------G--DYECVAT-------LEGHENEVKSVSWNAS---GTLLA 134 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~---------~--~~~~~~~-------~~~h~~~v~~v~~~~~---~~~l~ 134 (352)
.|..+.++|+|++++..|..+-..+.-... + +..|... ...+...|..+.|+|. +.+|+
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~ 165 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLV 165 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEE
Confidence 577889999999999888866554443221 1 1122211 0123457889999986 47888
Q ss_pred EeeCCCcEEEEecCCC
Q 018675 135 TCGRDKSVWIWEVMPG 150 (352)
Q Consensus 135 s~~~d~~v~vwd~~~~ 150 (352)
.-..|+++++||+...
T Consensus 166 vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 166 VLTSDNTLRLYDISDP 181 (717)
T ss_pred EEecCCEEEEEecCCC
Confidence 8999999999998643
No 402
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=83.42 E-value=31 Score=30.45 Aligned_cols=107 Identities=20% Similarity=0.259 Sum_probs=55.6
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCce-eeeEee----ccccCCeeEEEECCC----CcEEEEeeCC--------
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDY-ECVATL----EGHENEVKSVSWNAS----GTLLATCGRD-------- 139 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~-~~~~~~----~~h~~~v~~v~~~~~----~~~l~s~~~d-------- 139 (352)
-++++|.|||+++++ ...|.|.+++ ..+.. ..+..+ .........++++|+ +.+.++-+..
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~ 81 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND 81 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence 467899999988775 5589999987 33332 222222 223456789999984 4443333321
Q ss_pred CcEEEEecCCC-Ce---eE-EEEEeec---CccCeeEEEEcCCCCEEEEEeCCC
Q 018675 140 KSVWIWEVMPG-NE---FE-CVSVLQG---HAQDVKMVQWHPTMDVLFSCSYDN 185 (352)
Q Consensus 140 ~~v~vwd~~~~-~~---~~-~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~d~ 185 (352)
..|.-|..... .. .+ .+..+.. .......+.|.|++.+.++.+..+
T Consensus 82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence 23333443322 11 11 1122222 223456789999997766665444
No 403
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.35 E-value=12 Score=38.46 Aligned_cols=147 Identities=12% Similarity=0.194 Sum_probs=78.0
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEE-CCCC-------cEEEEeeCCCcEEEEecCCCCeeEEEEEee----
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSW-NASG-------TLLATCGRDKSVWIWEVMPGNEFECVSVLQ---- 160 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~-~~~~-------~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~---- 160 (352)
+.|+.+.+|+..++.. ...+.+-...|..|.. .|.. ++++..+.--.|.++-+.-.........+.
T Consensus 96 TiDn~L~lWny~~~~e--~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~ 173 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNE--LAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFK 173 (1311)
T ss_pred EeCCeEEEEEcCCCCc--cccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCccccccccee
Confidence 4688999999876321 2233444445555543 2321 232222222335555432111101111111
Q ss_pred --cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCcee----------------EeeeeccCCCCcccEEEEEE
Q 018675 161 --GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHC----------------VQTISESNNGHSSTIWALSF 222 (352)
Q Consensus 161 --~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~----------------~~~~~~~~~~h~~~i~~l~~ 222 (352)
.....|.++....+|+.+++|-.+ .+|.+.-...+.|.. +.++......+..+|..+..
T Consensus 174 i~~dg~~V~~I~~t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~I 250 (1311)
T KOG1900|consen 174 ISVDGVSVNCITYTENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITI 250 (1311)
T ss_pred eecCCceEEEEEeccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEe
Confidence 123457788877778776665544 345332222222210 01111122356789999999
Q ss_pred cCCCCEEEEEeCCCcEEEEcCC
Q 018675 223 NAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 223 ~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
......+.+=+..|+|.+|++.
T Consensus 251 D~SR~IlY~lsek~~v~~Y~i~ 272 (1311)
T KOG1900|consen 251 DNSRNILYVLSEKGTVSAYDIG 272 (1311)
T ss_pred ccccceeeeeccCceEEEEEcc
Confidence 9998899999999999999975
No 404
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=83.04 E-value=2.5 Score=41.46 Aligned_cols=141 Identities=13% Similarity=0.207 Sum_probs=76.9
Q ss_pred CcEEEEEc--cCCceeeeEee---ccccCCeeEEEECC---CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 96 ATTCIWED--VGGDYECVATL---EGHENEVKSVSWNA---SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 96 ~~i~i~~~--~~~~~~~~~~~---~~h~~~v~~v~~~~---~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
|.+.+|+. ..|++.+...+ ......+.-|.|+| +.-++..+-.++++++....... ...+.+|...++
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~----~~l~rsHs~~~~ 228 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRAL----RSLFRSHSQRVT 228 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHH----HHHHHhcCCCcc
Confidence 56778875 34544433222 23334566777876 34455556667777775543221 122344665544
Q ss_pred EE-----------EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC---------C
Q 018675 168 MV-----------QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG---------D 227 (352)
Q Consensus 168 ~~-----------~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~---------~ 227 (352)
.+ ..+|||..++.+..||.++.|-+.-.......|.+... ...+| ..|..+ |+... .
T Consensus 229 d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewk-phd~~-p~vC~l-c~~~~~~~v~i~~w~ 305 (1283)
T KOG1916|consen 229 DMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWK-PHDKH-PRVCWL-CHKQEILVVSIGKWV 305 (1283)
T ss_pred cHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccC-CCCCC-Cceeee-eccccccCCccceeE
Confidence 32 37899999999999999999965544444444443332 11222 233333 43321 2
Q ss_pred EEEEEeC-CCcEEEEcC
Q 018675 228 KLVSCSD-DLTIKIWGA 243 (352)
Q Consensus 228 ~l~s~~~-dg~i~iwd~ 243 (352)
+++++++ +..+++|..
T Consensus 306 ~~Itttd~nre~k~w~~ 322 (1283)
T KOG1916|consen 306 LRITTTDVNREEKFWAE 322 (1283)
T ss_pred EEEecccCCcceeEeec
Confidence 4555543 456888854
No 405
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=82.82 E-value=9.2 Score=30.14 Aligned_cols=29 Identities=28% Similarity=0.454 Sum_probs=23.5
Q ss_pred CeeEEEECCCC------cEEEEeeCCCcEEEEecC
Q 018675 120 EVKSVSWNASG------TLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 120 ~v~~v~~~~~~------~~l~s~~~d~~v~vwd~~ 148 (352)
.|..++|||.| .+|+....++.|.+|.-.
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 68899999854 378888899999999753
No 406
>PRK13684 Ycf48-like protein; Provisional
Probab=82.69 E-value=34 Score=30.30 Aligned_cols=234 Identities=13% Similarity=0.183 Sum_probs=104.8
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEe-eccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT-LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 152 (352)
...++++.|....+.+++| .++.|..=.+-...++.+.. +......+.++.|.++ ..++ ++..+.|.. .-..+..
T Consensus 45 ~~~l~~v~F~d~~~g~avG-~~G~il~T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~~-~G~~g~i~~-S~DgG~t 120 (334)
T PRK13684 45 EANLLDIAFTDPNHGWLVG-SNRTLLETNDGGETWEERSLDLPEENFRLISISFKGD-EGWI-VGQPSLLLH-TTDGGKN 120 (334)
T ss_pred CCceEEEEEeCCCcEEEEE-CCCEEEEEcCCCCCceECccCCcccccceeeeEEcCC-cEEE-eCCCceEEE-ECCCCCC
Confidence 3467888998555656655 45555432222223332211 1111234667777643 3344 344454322 1122333
Q ss_pred eEEEEE---eecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 153 FECVSV---LQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 153 ~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
...+.. +.++. .......+ +. +..++..+.| |...+ .-.+|..+.. .-...+.++.+.|++.++
T Consensus 121 W~~~~~~~~~~~~~--~~i~~~~~-~~-~~~~g~~G~i--~~S~D-gG~tW~~~~~------~~~g~~~~i~~~~~g~~v 187 (334)
T PRK13684 121 WTRIPLSEKLPGSP--YLITALGP-GT-AEMATNVGAI--YRTTD-GGKNWEALVE------DAAGVVRNLRRSPDGKYV 187 (334)
T ss_pred CeEccCCcCCCCCc--eEEEEECC-Cc-ceeeeccceE--EEECC-CCCCceeCcC------CCcceEEEEEECCCCeEE
Confidence 332221 11111 11112222 22 2233444444 22221 2234543321 123468889999998776
Q ss_pred EEEeCCCcEEE-EcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccc
Q 018675 230 VSCSDDLTIKI-WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYK 308 (352)
Q Consensus 230 ~s~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~ 308 (352)
+++. .|.+.. ++- +-..|.... ......++.+.+.+++.++..+..|.+++-.... ...+.
T Consensus 188 ~~g~-~G~i~~s~~~---------gg~tW~~~~---~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~-----G~sW~ 249 (334)
T PRK13684 188 AVSS-RGNFYSTWEP---------GQTAWTPHQ---RNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDD-----LESWS 249 (334)
T ss_pred EEeC-CceEEEEcCC---------CCCeEEEee---CCCcccceeeeEcCCCCEEEEecCCEEEEccCCC-----CCccc
Confidence 6554 454432 211 112343322 1234567777777777555555667665321111 11111
Q ss_pred eeeecccccCcceeEEEecCCCcceEEEecCCCeEE
Q 018675 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 344 (352)
Q Consensus 309 ~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~ 344 (352)
.+......-...+.++++.|+++ ++ .++.+|.+.
T Consensus 250 ~~~~~~~~~~~~l~~v~~~~~~~-~~-~~G~~G~v~ 283 (334)
T PRK13684 250 KPIIPEITNGYGYLDLAYRTPGE-IW-AGGGNGTLL 283 (334)
T ss_pred cccCCccccccceeeEEEcCCCC-EE-EEcCCCeEE
Confidence 11111011224578899998765 44 466677654
No 407
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=81.89 E-value=44 Score=31.00 Aligned_cols=57 Identities=14% Similarity=0.209 Sum_probs=36.6
Q ss_pred cCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE----Eee-cCccCeeEEEEcCCC
Q 018675 118 ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS----VLQ-GHAQDVKMVQWHPTM 175 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~----~~~-~h~~~v~~~~~~~~~ 175 (352)
-...+.+.|.|++.+|++--..|.|++++...... ..+. ... ........++++|+.
T Consensus 29 L~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~-~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 29 LNKPWALLWGPDNQLWVTERATGKILRVNPETGEV-KVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCce-eeeecCCceeccCCCCceeeEEECCCc
Confidence 34578999999998887766568898887433221 1111 111 124567889999885
No 408
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=81.34 E-value=30 Score=33.88 Aligned_cols=107 Identities=9% Similarity=0.054 Sum_probs=67.2
Q ss_pred CCCEEEEEeCCCcEEEEEccC-------C----c-------eeeeEeeccccCCeeEEEEC--CCCcEEEEeeCCCcEEE
Q 018675 85 SGKLLATASFDATTCIWEDVG-------G----D-------YECVATLEGHENEVKSVSWN--ASGTLLATCGRDKSVWI 144 (352)
Q Consensus 85 ~~~~l~s~~~d~~i~i~~~~~-------~----~-------~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~~~d~~v~v 144 (352)
+...|+.+..||.+.+|.... . + ..+-..+. -...++.++++ ....+||.++....|.|
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTV 191 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTV 191 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEE
Confidence 456888999999999996310 0 0 01112222 23468899998 77778888888888888
Q ss_pred EecCCCCeeEEEEEeecCccCeeEEEEcCCC---C---EEEEEeCCCcEEEEec
Q 018675 145 WEVMPGNEFECVSVLQGHAQDVKMVQWHPTM---D---VLFSCSYDNTIKVWWA 192 (352)
Q Consensus 145 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~---~l~s~~~d~~i~iw~~ 192 (352)
|-............-..|..+|-+++|-++. . .+++++-.|.+.+|++
T Consensus 192 Faf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 192 FAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 7653321111111111255678888887643 2 6778899999888766
No 409
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.78 E-value=36 Score=29.27 Aligned_cols=166 Identities=10% Similarity=0.108 Sum_probs=91.0
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA 96 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~ 96 (352)
+.|-+..|++++|+|++ ..|++..+...-.||=...+.-+-+.+.. ..| -.-++.+..+|++.++--.++
T Consensus 81 i~g~~~nvS~LTynp~~------rtLFav~n~p~~iVElt~~GdlirtiPL~--g~~--DpE~Ieyig~n~fvi~dER~~ 150 (316)
T COG3204 81 ILGETANVSSLTYNPDT------RTLFAVTNKPAAIVELTKEGDLIRTIPLT--GFS--DPETIEYIGGNQFVIVDERDR 150 (316)
T ss_pred cccccccccceeeCCCc------ceEEEecCCCceEEEEecCCceEEEeccc--ccC--ChhHeEEecCCEEEEEehhcc
Confidence 45666669999999985 34555555556656633333222121111 112 123455666777777666667
Q ss_pred cEEEEEccCCce--------eeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc-----
Q 018675 97 TTCIWEDVGGDY--------ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA----- 163 (352)
Q Consensus 97 ~i~i~~~~~~~~--------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~----- 163 (352)
.+.++....+.. ..+....+.+.....++|.|....|..+-+-+-+.++........-.++....+.
T Consensus 151 ~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~ 230 (316)
T COG3204 151 ALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDL 230 (316)
T ss_pred eEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccce
Confidence 666664432210 0111112225677899999998888888888888888765433111111111111
Q ss_pred --cCeeEEEEcCC-CCEEEEEeCCCcEEEEec
Q 018675 164 --QDVKMVQWHPT-MDVLFSCSYDNTIKVWWA 192 (352)
Q Consensus 164 --~~v~~~~~~~~-~~~l~s~~~d~~i~iw~~ 192 (352)
..+..+.|.+. +.+++-+.+++.+.-.+.
T Consensus 231 f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~ 262 (316)
T COG3204 231 FVLDVSGLEFNAITNSLLVLSDESRRLLEVDL 262 (316)
T ss_pred EeeccccceecCCCCcEEEEecCCceEEEEec
Confidence 23556677754 445555556666655543
No 410
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.43 E-value=47 Score=30.47 Aligned_cols=108 Identities=19% Similarity=0.309 Sum_probs=64.8
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEE
Q 018675 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQF 293 (352)
Q Consensus 214 ~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~ 293 (352)
.++|.++.|++|.+.+|.--.|..|.++........ ....+.|.. ....|..+.|+.+.-+|-....| +.+
T Consensus 66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~-----l~~~~~ck~---k~~~IlGF~W~~s~e~A~i~~~G-~e~ 136 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQ-----LEYTQECKT---KNANILGFCWTSSTEIAFITDQG-IEF 136 (657)
T ss_pred CCceeEEEeccCcceEEEEecCceEEEEecCCCchh-----hHHHHHhcc---CcceeEEEEEecCeeEEEEecCC-eEE
Confidence 358999999999999999999999999965211110 001111221 12347788888876666555544 333
Q ss_pred EEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEec
Q 018675 294 FVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASAS 338 (352)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~ 338 (352)
|..- +..+ .+.....|+..|+-..|.|+-.-+|.+.+
T Consensus 137 y~v~-------pekr-slRlVks~~~nvnWy~yc~et~v~LL~t~ 173 (657)
T KOG2377|consen 137 YQVL-------PEKR-SLRLVKSHNLNVNWYMYCPETAVILLSTT 173 (657)
T ss_pred EEEc-------hhhh-hhhhhhhcccCccEEEEccccceEeeecc
Confidence 3211 1111 12233567888999999987654444444
No 411
>PHA03098 kelch-like protein; Provisional
Probab=79.99 E-value=56 Score=31.06 Aligned_cols=63 Identities=13% Similarity=0.134 Sum_probs=32.7
Q ss_pred CCCEEEEEeCCC-----cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC------CcEEEEecCC
Q 018675 85 SGKLLATASFDA-----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD------KSVWIWEVMP 149 (352)
Q Consensus 85 ~~~~l~s~~~d~-----~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d------~~v~vwd~~~ 149 (352)
++++.+.||.++ .+..||..++.+.....+....... +++ .-++...+.||.+ +.+..||...
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~-~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t 415 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNP-CVV-NVNNLIYVIGGISKNDELLKTVECFSLNT 415 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccc-eEE-EECCEEEEECCcCCCCcccceEEEEeCCC
Confidence 677888888663 4556776665554333222111111 111 1245666666632 3567777653
No 412
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=79.90 E-value=45 Score=29.94 Aligned_cols=59 Identities=22% Similarity=0.402 Sum_probs=32.0
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCC------ceeee-Eeecc----ccCCeeEEEECCCCcEEEEee
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGG------DYECV-ATLEG----HENEVKSVSWNASGTLLATCG 137 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~------~~~~~-~~~~~----h~~~v~~v~~~~~~~~l~s~~ 137 (352)
..+.+++.++| ++++ ... .|..+....+ +.+.+ ..+.. +....+.+.|.|+|.+.++-+
T Consensus 73 ~p~Gi~~~~~G-lyV~-~~~-~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 73 MVTGLAVAVGG-VYVA-TPP-DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred CccceeEecCC-EEEe-CCC-eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 45778888888 5554 333 3444422211 11112 22222 234477899999998766555
No 413
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=77.49 E-value=18 Score=29.83 Aligned_cols=63 Identities=11% Similarity=0.289 Sum_probs=37.6
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeee---eec------ceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAV---LEE------MHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~---~~~------~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
+.+++....+|.+.+||+.+.+........ +.. .....|..+.++.+|.-+++-+ +|....|+
T Consensus 22 ~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~ 93 (219)
T PF07569_consen 22 GSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS 93 (219)
T ss_pred CCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence 357888889999999999877544332111 110 1234566666676665555433 35555554
No 414
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=76.76 E-value=5.5 Score=27.23 Aligned_cols=31 Identities=19% Similarity=0.272 Sum_probs=27.0
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.-+.|.++|+++.++++....+.|++++...
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 4578999999999999999999999998764
No 415
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=76.46 E-value=43 Score=27.82 Aligned_cols=94 Identities=14% Similarity=0.185 Sum_probs=54.8
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEe--cCCCceeeeeeeee--ec----ceecceEEEEECCCCCEEEEEeCCCc
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWE--QSASSRFWNCKAVL--EE----MHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~--~~~~~~~~~~~~~~--~~----~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
+++|..+. ..+..+-+.+-+|.-|+ ..++. +.+.+.++ ++ .+.. --.++...+|.+.++.-.-++
T Consensus 162 gl~Wd~d~-----K~fY~iDsln~~V~a~dyd~~tG~-~snr~~i~dlrk~~~~e~~~-PDGm~ID~eG~L~Va~~ng~~ 234 (310)
T KOG4499|consen 162 GLAWDSDA-----KKFYYIDSLNYEVDAYDYDCPTGD-LSNRKVIFDLRKSQPFESLE-PDGMTIDTEGNLYVATFNGGT 234 (310)
T ss_pred cccccccC-----cEEEEEccCceEEeeeecCCCccc-ccCcceeEEeccCCCcCCCC-CCcceEccCCcEEEEEecCcE
Confidence 35665432 35666667788888887 33332 11111111 11 1110 112344667888888888888
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECC
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNA 128 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~ 128 (352)
+...|..+++. +.+++-....|+|++|-.
T Consensus 235 V~~~dp~tGK~--L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 235 VQKVDPTTGKI--LLEIKLPTPQITSCCFGG 263 (310)
T ss_pred EEEECCCCCcE--EEEEEcCCCceEEEEecC
Confidence 98888888754 344444477899999953
No 416
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=76.41 E-value=21 Score=32.58 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=25.3
Q ss_pred cceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 319 MDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 319 ~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
..+.++..+|.++ +.|....=|.|.|+|+.+.
T Consensus 308 R~~~~i~~sP~~~-laA~tDslGRV~LiD~~~~ 339 (415)
T PF14655_consen 308 REGESICLSPSGR-LAAVTDSLGRVLLIDVARG 339 (415)
T ss_pred ceEEEEEECCCCC-EEEEEcCCCcEEEEECCCC
Confidence 4688999999875 6666666689999998764
No 417
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=75.86 E-value=15 Score=35.08 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=38.7
Q ss_pred CCCCEEEEEeCCCcEEEEEccC----C-ceeeeEeeccc--------------------cCCeeEEEECC----CCcEEE
Q 018675 84 PSGKLLATASFDATTCIWEDVG----G-DYECVATLEGH--------------------ENEVKSVSWNA----SGTLLA 134 (352)
Q Consensus 84 ~~~~~l~s~~~d~~i~i~~~~~----~-~~~~~~~~~~h--------------------~~~v~~v~~~~----~~~~l~ 134 (352)
++...++.+..||.+....... + ..... ....+ .+.+.+++..+ +..+++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEE-LFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLF 234 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE-----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEE-EeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEE
Confidence 4667788888899887765432 1 11110 11111 13345566655 667899
Q ss_pred EeeCCCcEEEEecCCCCe
Q 018675 135 TCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 135 s~~~d~~v~vwd~~~~~~ 152 (352)
+.+.|+++|+||+..+..
T Consensus 235 tl~~D~~LRiW~l~t~~~ 252 (547)
T PF11715_consen 235 TLSRDHTLRIWSLETGQC 252 (547)
T ss_dssp EEETTSEEEEEETTTTCE
T ss_pred EEeCCCeEEEEECCCCeE
Confidence 999999999999976653
No 418
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=75.61 E-value=43 Score=27.37 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=32.3
Q ss_pred cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEE
Q 018675 131 TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC 181 (352)
Q Consensus 131 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 181 (352)
+.|+.+...+.|-+|++.. ...+....+.. -+.|..+.++..|+++++-
T Consensus 29 d~Lfva~~g~~Vev~~l~~-~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQ-EECPLLCTFST-VGRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred ceEEEEcCCCEEEEEEccc-CCCceeEEEcc-hhheeEEEeccccceEEEE
Confidence 3333335557899999872 22333344432 3678899999999999875
No 419
>PHA02790 Kelch-like protein; Provisional
Probab=75.55 E-value=72 Score=29.94 Aligned_cols=63 Identities=10% Similarity=0.080 Sum_probs=33.7
Q ss_pred CCCCEEEEEeCCC--cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC---cEEEEecC
Q 018675 84 PSGKLLATASFDA--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK---SVWIWEVM 148 (352)
Q Consensus 84 ~~~~~l~s~~~d~--~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~---~v~vwd~~ 148 (352)
-++.+.+.|+.++ ++-.|+..++.+.....+.........+. -++...+.||.++ ++-.||..
T Consensus 317 ~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~ 384 (480)
T PHA02790 317 ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPN 384 (480)
T ss_pred ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEE--ECCEEEEecCcCCCCccEEEEeCC
Confidence 3678888888643 46677766555544333321111111222 3566667776543 45667754
No 420
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=74.95 E-value=68 Score=29.40 Aligned_cols=146 Identities=11% Similarity=0.194 Sum_probs=80.8
Q ss_pred CCEEEEEeCCCcEEEEEccCCcee---eeEeeccccCCeeEEEECC-----CCcEEEEeeCCCcEEEEecCCCC------
Q 018675 86 GKLLATASFDATTCIWEDVGGDYE---CVATLEGHENEVKSVSWNA-----SGTLLATCGRDKSVWIWEVMPGN------ 151 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~---~~~~~~~h~~~v~~v~~~~-----~~~~l~s~~~d~~v~vwd~~~~~------ 151 (352)
...|++|+..|.++||+....+.. .+... .-..+|-.+..-+ ....||.-.. +.+.+|.+....
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~-~l~~PILqv~~G~F~s~~~~~~LaVLhP-~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLET-QLKDPILQVECGKFVSGSEDLQLAVLHP-RKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEE-ecCCcEEEEEeccccCCCCcceEEEecC-CEEEEEEEEecCCCcccC
Confidence 467899999999999987543322 12221 2346777776532 2234554443 567777762111
Q ss_pred eeEEEEEeecCcc-----CeeEEEEcC-C-CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC
Q 018675 152 EFECVSVLQGHAQ-----DVKMVQWHP-T-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224 (352)
Q Consensus 152 ~~~~~~~~~~h~~-----~v~~~~~~~-~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~ 224 (352)
..-.+.....|.- +.+.-.|-. . ..++..=+.||.+.+|+- +.......+.. .-+.+ .+.|.+
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feq-----e~~~f~~~lp~--~llPg---Pl~Y~~ 184 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQ-----ESFAFSRFLPD--FLLPG---PLCYCP 184 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeC-----CcEEEEEEcCC--CCCCc---CeEEee
Confidence 0111222222322 222223321 2 356778899999999942 22211112211 11223 367888
Q ss_pred CCCEEEEEeCCCcEEEEcC
Q 018675 225 KGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 225 ~~~~l~s~~~dg~i~iwd~ 243 (352)
.-+.+++++.+..+.-|..
T Consensus 185 ~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 185 RTDSFVTASSSWTLECYKY 203 (418)
T ss_pred cCCEEEEecCceeEEEecH
Confidence 8899999999999999864
No 421
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=74.31 E-value=25 Score=32.10 Aligned_cols=97 Identities=18% Similarity=0.204 Sum_probs=50.2
Q ss_pred EEEEcCCCCEEEEEeCCCcEEE---EcCCccccccCCCCccceeeEEeecccCcceEEEEecC------------CceEE
Q 018675 219 ALSFNAKGDKLVSCSDDLTIKI---WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR------------EGIIA 283 (352)
Q Consensus 219 ~l~~~~~~~~l~s~~~dg~i~i---wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------~~~~~ 283 (352)
.++.+|++++||.+..+..+-+ |+...... ..+...+.....+.......|+++.+-| ...++
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~--~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~ 83 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGE--NENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIA 83 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCC--CCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEE
Confidence 3677899998888876655544 43211110 0011111111111111113445443322 13688
Q ss_pred ecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEec
Q 018675 284 SGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327 (352)
Q Consensus 284 s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 327 (352)
.|-.+|.+++|.....- +....-|..+|..+.+-
T Consensus 84 VG~ssG~vrfyte~G~L----------L~~Q~~h~~pV~~ik~~ 117 (415)
T PF14655_consen 84 VGTSSGYVRFYTENGVL----------LLSQLLHEEPVLKIKCR 117 (415)
T ss_pred EEecccEEEEEeccchH----------HHHHhcCccceEEEEec
Confidence 99999999999765432 22234567777777764
No 422
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=73.28 E-value=28 Score=28.69 Aligned_cols=72 Identities=17% Similarity=0.165 Sum_probs=47.1
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCC-------CCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNN-------GHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~-------~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
+...+.++++...+|.+.+||+...... ... ..+..... .....|.++.++.+|.-+++-+ +|....|+.
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~-~~~-~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~ 94 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAV-LPP-VSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSP 94 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeec-cCC-ccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecc
Confidence 3446778999999999999998653210 000 01111111 3457788999998998887765 578888986
Q ss_pred Cc
Q 018675 244 DI 245 (352)
Q Consensus 244 ~~ 245 (352)
++
T Consensus 95 ~L 96 (219)
T PF07569_consen 95 DL 96 (219)
T ss_pred cc
Confidence 53
No 423
>PHA03098 kelch-like protein; Provisional
Probab=70.98 E-value=97 Score=29.43 Aligned_cols=63 Identities=8% Similarity=0.011 Sum_probs=32.1
Q ss_pred CCCEEEEEeCC------CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC--------cEEEEecCC
Q 018675 85 SGKLLATASFD------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK--------SVWIWEVMP 149 (352)
Q Consensus 85 ~~~~l~s~~~d------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--------~v~vwd~~~ 149 (352)
++++.+.||.+ +.+..||..+..+.....+........++. .++..++.||.+. .+.+||...
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 465 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIY--HDGKIYVIGGISYIDNIKVYNIVESYNPVT 465 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEE--ECCEEEEECCccCCCCCcccceEEEecCCC
Confidence 67777777742 346677776665544332221111111222 2455666665432 367777654
No 424
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=70.89 E-value=39 Score=31.42 Aligned_cols=64 Identities=16% Similarity=0.282 Sum_probs=46.9
Q ss_pred ECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC
Q 018675 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 82 ~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~ 148 (352)
-.....++|.|+..|-|++||-.+.. ....+.+-..+|..+....+|.++++.+. .++.+-|++
T Consensus 569 ~tTesGyIa~as~kGDirLyDRig~r--AKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 569 MTTESGYIAAASRKGDIRLYDRIGKR--AKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred ccccCceEEEecCCCceeeehhhcch--hhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 34456789999999999999865432 23445666778999999999998776665 456677764
No 425
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=70.63 E-value=83 Score=28.47 Aligned_cols=155 Identities=12% Similarity=0.142 Sum_probs=89.1
Q ss_pred EEEEECCCCC-EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC---CCcEEEEecCCCCee
Q 018675 78 RSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR---DKSVWIWEVMPGNEF 153 (352)
Q Consensus 78 ~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~v~vwd~~~~~~~ 153 (352)
..+++++.+. ..++...++.+.+.|..+........ .+ .....++++++++.+..+.. ++++.+.|-......
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~-vG--~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~ 153 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIP-VG--LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT 153 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEee-ec--cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE
Confidence 4567888876 55555566888888854433211111 12 25568899999977666654 677877776544322
Q ss_pred EEEEEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
. ....+. .+ ..+++.|++..++.+. .++.+.+.+....... . .+.. ....-...-..+.++|+|.++...
T Consensus 154 ~--~~~vG~-~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~---~-~~~~-~~~~~~~~P~~i~v~~~g~~~yV~ 224 (381)
T COG3391 154 A--TIPVGN-TP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV---R-GSVG-SLVGVGTGPAGIAVDPDGNRVYVA 224 (381)
T ss_pred E--EEecCC-Cc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee---c-cccc-cccccCCCCceEEECCCCCEEEEE
Confidence 2 222222 23 7788999999666554 6788888874332110 0 0000 001122334568899999865543
Q ss_pred e-CC--CcEEEEcCC
Q 018675 233 S-DD--LTIKIWGAD 244 (352)
Q Consensus 233 ~-~d--g~i~iwd~~ 244 (352)
. .+ +.+...|..
T Consensus 225 ~~~~~~~~v~~id~~ 239 (381)
T COG3391 225 NDGSGSNNVLKIDTA 239 (381)
T ss_pred eccCCCceEEEEeCC
Confidence 3 33 577777654
No 426
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=70.37 E-value=66 Score=27.24 Aligned_cols=144 Identities=11% Similarity=0.083 Sum_probs=77.7
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeE------
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVA------ 112 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~------ 112 (352)
++.|+-|.++| +.+++...... ..... +...|..+..-|+-+.|++= .|+.+.+++...-......
T Consensus 7 ~~~L~vGt~~G-l~~~~~~~~~~---~~~i~---~~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 7 GDRLLVGTEDG-LYVYDLSDPSK---PTRIL---KLSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred CCEEEEEECCC-EEEEEecCCcc---ceeEe---ecceEEEEEEecccCEEEEE-cCCccEEEEchhhcccccccccccc
Confidence 56788888888 78888732221 11111 23348888888877766554 4599999986432111100
Q ss_pred ------eeccccCCeeEEE--ECCCCcEEEEeeCCCcEEEEecCCC-Cee-EEEEEeecCccCeeEEEEcCCCCEEEEEe
Q 018675 113 ------TLEGHENEVKSVS--WNASGTLLATCGRDKSVWIWEVMPG-NEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 113 ------~~~~h~~~v~~v~--~~~~~~~l~s~~~d~~v~vwd~~~~-~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
........+..++ -...+...+.+...++|.+|..... ... .....+. -...+..++|. ++.++.|.
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~ 155 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGT 155 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEe
Confidence 0011223344444 1123334444444568888887543 122 2233332 23567888887 44666666
Q ss_pred CCCcEEEEecCC
Q 018675 183 YDNTIKVWWAED 194 (352)
Q Consensus 183 ~d~~i~iw~~~~ 194 (352)
.++ ..+.|+..
T Consensus 156 ~~~-f~~idl~~ 166 (275)
T PF00780_consen 156 SKG-FYLIDLNT 166 (275)
T ss_pred CCc-eEEEecCC
Confidence 444 56666653
No 427
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=70.22 E-value=75 Score=27.80 Aligned_cols=191 Identities=12% Similarity=0.067 Sum_probs=90.2
Q ss_pred EEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCce-eeeEeec-cc-
Q 018675 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDY-ECVATLE-GH- 117 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~-~~~~~~~-~h- 117 (352)
++.+--..+.+.-|+..++.. ..+ .+...+.++..-..+..|+++. ..+.+++...+.. ....... +.
T Consensus 39 L~w~DI~~~~i~r~~~~~g~~-----~~~--~~p~~~~~~~~~d~~g~Lv~~~--~g~~~~~~~~~~~~t~~~~~~~~~~ 109 (307)
T COG3386 39 LLWVDILGGRIHRLDPETGKK-----RVF--PSPGGFSSGALIDAGGRLIACE--HGVRLLDPDTGGKITLLAEPEDGLP 109 (307)
T ss_pred EEEEeCCCCeEEEecCCcCce-----EEE--ECCCCcccceeecCCCeEEEEc--cccEEEeccCCceeEEeccccCCCC
Confidence 444444556677776654321 111 1223334443333344444332 3344555444433 2222221 11
Q ss_pred cCCeeEEEECCCCcEEEEeeC------C---CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-CCcE
Q 018675 118 ENEVKSVSWNASGTLLATCGR------D---KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DNTI 187 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~~------d---~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~i 187 (352)
....+.+...|+|.+-++.-. + ..=.+|.+.+.. ........+-..-+.++|+|+++.|+.+-. .+.|
T Consensus 110 ~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g--~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i 187 (307)
T COG3386 110 LNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDG--GVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRI 187 (307)
T ss_pred cCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCC--CEEEeecCcEEecCceEECCCCCEEEEEeCCCCeE
Confidence 134557777888876654433 0 111355554321 122333333445578999999987666544 4677
Q ss_pred EEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC-cEEEEcCC
Q 018675 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL-TIKIWGAD 244 (352)
Q Consensus 188 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg-~i~iwd~~ 244 (352)
.-|+............... .........-.++...+|.+.+++..+| .|.+|+.+
T Consensus 188 ~r~~~d~~~g~~~~~~~~~--~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd 243 (307)
T COG3386 188 HRYDLDPATGPIGGRRGFV--DFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD 243 (307)
T ss_pred EEEecCcccCccCCcceEE--EccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC
Confidence 7776542111000000000 0001112233466777888886555444 88888754
No 428
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=69.40 E-value=97 Score=28.80 Aligned_cols=55 Identities=16% Similarity=0.211 Sum_probs=36.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec-----cccCCeeEEEECCCC
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE-----GHENEVKSVSWNASG 130 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~-----~h~~~v~~v~~~~~~ 130 (352)
.-..++|.|||++|++--..|.|++++..++....+..+. .-.+....|+++|+-
T Consensus 31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 3577899999998887655689988875443322222111 125678899999863
No 429
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=69.23 E-value=9.1 Score=21.44 Aligned_cols=23 Identities=17% Similarity=0.380 Sum_probs=16.1
Q ss_pred CCCcceEEEecCCCeEEEEeecc
Q 018675 328 PGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 328 p~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|++++++++.-.+++|.++|...
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~ 23 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTAT 23 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCC
Confidence 45666777777778888877643
No 430
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=68.13 E-value=96 Score=28.25 Aligned_cols=102 Identities=21% Similarity=0.225 Sum_probs=56.9
Q ss_pred ceEEEEECCCCCEEEEE-eCCC----cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC----------
Q 018675 76 TVRSCAWSPSGKLLATA-SFDA----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK---------- 140 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~-~~d~----~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~---------- 140 (352)
.+....+||+|+++|.+ +..| .++++|..++... ...+.. .....+.|.++++.|+-...+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l-~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~ 201 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFL-PDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYP 201 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEE-EEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCc-CCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence 34467899999998855 3333 4888998877432 122221 1112399999988766554333
Q ss_pred -cEEEEecCCCCeeEEEEEeecCccC--eeEEEEcCCCCEEEEE
Q 018675 141 -SVWIWEVMPGNEFECVSVLQGHAQD--VKMVQWHPTMDVLFSC 181 (352)
Q Consensus 141 -~v~vwd~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~s~ 181 (352)
.|..|.+-....-. ...+...... ...+..++++++++..
T Consensus 202 ~~v~~~~~gt~~~~d-~lvfe~~~~~~~~~~~~~s~d~~~l~i~ 244 (414)
T PF02897_consen 202 RQVYRHKLGTPQSED-ELVFEEPDEPFWFVSVSRSKDGRYLFIS 244 (414)
T ss_dssp EEEEEEETTS-GGG--EEEEC-TTCTTSEEEEEE-TTSSEEEEE
T ss_pred cEEEEEECCCChHhC-eeEEeecCCCcEEEEEEecCcccEEEEE
Confidence 36666664332211 1223322222 4577888999886643
No 431
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=66.83 E-value=16 Score=18.70 Aligned_cols=25 Identities=12% Similarity=0.343 Sum_probs=17.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 217 IWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 217 i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
...|+.+++|+.+++=....+|++|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 3467777888877777666666654
No 432
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=65.78 E-value=1.1e+02 Score=27.94 Aligned_cols=115 Identities=18% Similarity=0.206 Sum_probs=60.3
Q ss_pred ceEEEEEccCCCCCCCccEEE-EeeCC----CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC-
Q 018675 23 RVWSLAWKPTAGVDGVAPVFA-SCSGD----KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA- 96 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~-s~s~D----~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~- 96 (352)
.+....++|+ ++++| +-+.. .++++.|+.+++.+. ..+ ....-..+.|.++++.++....+.
T Consensus 125 ~~~~~~~Spd------g~~la~~~s~~G~e~~~l~v~Dl~tg~~l~---d~i---~~~~~~~~~W~~d~~~~~y~~~~~~ 192 (414)
T PF02897_consen 125 SLGGFSVSPD------GKRLAYSLSDGGSEWYTLRVFDLETGKFLP---DGI---ENPKFSSVSWSDDGKGFFYTRFDED 192 (414)
T ss_dssp EEEEEEETTT------SSEEEEEEEETTSSEEEEEEEETTTTEEEE---EEE---EEEESEEEEECTTSSEEEEEECSTT
T ss_pred EeeeeeECCC------CCEEEEEecCCCCceEEEEEEECCCCcCcC---Ccc---cccccceEEEeCCCCEEEEEEeCcc
Confidence 3335677776 34544 43443 359999998874321 111 111122389999999887766544
Q ss_pred --------c--EEEEEccCCceeeeEeeccccCC--eeEEEECCCCcEEEEe-eCC---CcEEEEecCC
Q 018675 97 --------T--TCIWEDVGGDYECVATLEGHENE--VKSVSWNASGTLLATC-GRD---KSVWIWEVMP 149 (352)
Q Consensus 97 --------~--i~i~~~~~~~~~~~~~~~~h~~~--v~~v~~~~~~~~l~s~-~~d---~~v~vwd~~~ 149 (352)
- +..|...+....-...+...... ...+..++++++|+.. ... ..+.+.++..
T Consensus 193 ~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~ 261 (414)
T PF02897_consen 193 QRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDD 261 (414)
T ss_dssp TSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCC
T ss_pred cccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccc
Confidence 2 45555433322212233333333 4577789999976543 332 3356666654
No 433
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=65.44 E-value=1.9e+02 Score=30.59 Aligned_cols=82 Identities=15% Similarity=0.230 Sum_probs=51.9
Q ss_pred CcceEEEEecCCceEEecCCCCeEEEEEccCCccccCc-cc-------------ceeeecccccCcceeEEEecCCCcce
Q 018675 268 DRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGP-SY-------------KMLLKKEKAHDMDVNSVQWSPGERRL 333 (352)
Q Consensus 268 ~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~-~~-------------~~~~~~~~~h~~~i~~~~~sp~~~~~ 333 (352)
.-.+.++....+|.+.-++.||.++-..+...+-+... .. ..+....-.+..+|..++... .+.+
T Consensus 178 g~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~-SR~I 256 (1311)
T KOG1900|consen 178 GVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN-SRNI 256 (1311)
T ss_pred CceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecc-ccce
Confidence 34566677777888888888886654443332211111 10 111111125677999999964 5778
Q ss_pred EEEecCCCeEEEEeecc
Q 018675 334 LASASDDGMIKIWELAN 350 (352)
Q Consensus 334 l~s~~~Dg~i~iw~~~~ 350 (352)
+-+-++-|+|++|++..
T Consensus 257 lY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 257 LYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeeeccCceEEEEEccC
Confidence 88999999999999864
No 434
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=64.32 E-value=0.86 Score=41.34 Aligned_cols=146 Identities=14% Similarity=0.306 Sum_probs=89.5
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcE-EEEeeCCCcEEEEecCCCCeeEEE
Q 018675 78 RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~ 156 (352)
....|-|.+.-++.+..+..+..||.... ...... .++..-.++|..++.. ++.+-..+.+.+||+......+ +
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~agq---~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq-L 112 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKAGQ---VILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ-L 112 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhhcc---eecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH-H
Confidence 34457777766888888888888875432 122221 2344556788777764 4556677899999986443221 1
Q ss_pred EEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
..-..|+.. -+.|++....++.+-..+.+.||+....+. + .....|...+..+++.+.+ +.+.++.|.
T Consensus 113 E~gg~~s~s--ll~wsKg~~el~ig~~~gn~viynhgtsR~--------i-iv~Gkh~RRgtq~av~lEd-~vil~dcd~ 180 (615)
T KOG2247|consen 113 ESGGTSSKS--LLAWSKGTPELVIGNNAGNIVIYNHGTSRR--------I-IVMGKHQRRGTQIAVTLED-YVILCDCDN 180 (615)
T ss_pred hccCcchHH--HHhhccCCccccccccccceEEEeccchhh--------h-hhhcccccceeEEEecccc-eeeecCcHH
Confidence 111112222 267888877788888889999996543211 1 1112278888999998876 456666665
Q ss_pred cEEE
Q 018675 237 TIKI 240 (352)
Q Consensus 237 ~i~i 240 (352)
.+.+
T Consensus 181 ~L~v 184 (615)
T KOG2247|consen 181 TLSV 184 (615)
T ss_pred HHHH
Confidence 5443
No 435
>PHA02790 Kelch-like protein; Provisional
Probab=63.01 E-value=1.4e+02 Score=28.13 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=32.5
Q ss_pred CCCEEEEEeCCC-----cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC--CcEEEEecC
Q 018675 85 SGKLLATASFDA-----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD--KSVWIWEVM 148 (352)
Q Consensus 85 ~~~~l~s~~~d~-----~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d--~~v~vwd~~ 148 (352)
++.++++|+.++ ++..||..++.+.....+.........+. -++...+.||.+ .++..||..
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~ 339 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHG 339 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECC
Confidence 456667777653 45567766655544433322111122222 356666777654 356777754
No 436
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=62.25 E-value=1.3e+02 Score=27.67 Aligned_cols=163 Identities=13% Similarity=0.064 Sum_probs=86.9
Q ss_pred EEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEE---ECC-CCCEEEEEeCCCcEEE
Q 018675 25 WSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCA---WSP-SGKLLATASFDATTCI 100 (352)
Q Consensus 25 ~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~---~s~-~~~~l~s~~~d~~i~i 100 (352)
.|++.-+-++.......++.||..|.+|||+....... .....++..-..+|..+. |.+ .....++.---.++.+
T Consensus 23 ~~l~v~~~~~~~~~~d~IivGS~~G~LrIy~P~~~~~~-~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~v 101 (418)
T PF14727_consen 23 GSLCVGNLDNSPSGSDKIIVGSYSGILRIYDPSGNEFQ-PEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSV 101 (418)
T ss_pred ceEEEEcccCCCCCccEEEEeccccEEEEEccCCCCCC-CccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEE
Confidence 34444443322223578999999999999998543311 112233333446676654 322 2333333455677778
Q ss_pred EEccC--C-----ceeeeEeeccccC--CeeEEEECC----C-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 101 WEDVG--G-----DYECVATLEGHEN--EVKSVSWNA----S-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 101 ~~~~~--~-----~~~~~~~~~~h~~--~v~~v~~~~----~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
|.... + ....+..+..|.= ....++.-| . ..++..-+.||++.+++-... .+ ...+.. .---
T Consensus 102 Y~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~-~f--~~~lp~-~llP 177 (418)
T PF14727_consen 102 YSVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESF-AF--SRFLPD-FLLP 177 (418)
T ss_pred EEEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcE-EE--EEEcCC-CCCC
Confidence 86521 1 1112222223321 122233222 2 357888899999999984211 11 111111 1112
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEec
Q 018675 167 KMVQWHPTMDVLFSCSYDNTIKVWWA 192 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iw~~ 192 (352)
-.+.|.|.-+.+++++.+..+..|..
T Consensus 178 gPl~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 178 GPLCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred cCeEEeecCCEEEEecCceeEEEecH
Confidence 34667787788999999999988853
No 437
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=62.18 E-value=1.1e+02 Score=30.75 Aligned_cols=86 Identities=13% Similarity=0.108 Sum_probs=46.3
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccc----c---cCCC-----CccceeeEEeecccCcceEEEEecCC-c
Q 018675 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM----Q---SGDG-----YASWRHLCTISGYHDRTIFSVHWSRE-G 280 (352)
Q Consensus 214 ~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~---~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~-~ 280 (352)
+-.|.++.-+.+|+.+.+|-.| +.+|.+.-... . +... +....+..-..+.+..+|..++.+++ +
T Consensus 181 GinV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDqsRg 258 (1263)
T COG5308 181 GINVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQSRG 258 (1263)
T ss_pred CceeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeeccccc
Confidence 3467777777789999999887 77775421100 0 0000 00001111112234556666666654 4
Q ss_pred eEEecCCCCeEEEEEccCCcc
Q 018675 281 IIASGAADDSVQFFVESKDDL 301 (352)
Q Consensus 281 ~~~s~~~d~~v~~~~~~~~~~ 301 (352)
.+.+-.....|+-+..++..+
T Consensus 259 ~ly~Lr~kS~Vray~itkngl 279 (1263)
T COG5308 259 LLYVLRKKSAVRAYSITKNGL 279 (1263)
T ss_pred ceeeecccceeeeEeeecccc
Confidence 566666677777776665443
No 438
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=62.10 E-value=1.1e+02 Score=26.71 Aligned_cols=115 Identities=16% Similarity=0.190 Sum_probs=65.0
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcc-----CCceeeeEeecc-----ccCCeeEEEECCCCc------------EEEE
Q 018675 78 RSCAWSPSGKLLATASFDATTCIWEDV-----GGDYECVATLEG-----HENEVKSVSWNASGT------------LLAT 135 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d~~i~i~~~~-----~~~~~~~~~~~~-----h~~~v~~v~~~~~~~------------~l~s 135 (352)
..++++|.+.+-++...-+...+||.. ......+.++.. .....+.+.|+.... .++.
T Consensus 26 WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif 105 (336)
T TIGR03118 26 WGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLF 105 (336)
T ss_pred ceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEE
Confidence 568899999888887778889999865 112122333321 124567777764322 3678
Q ss_pred eeCCCcEEEEecCCCCe---eEEEEEeecC-ccC-eeEEEEcC--CCCEEEEEe-CCCcEEEEecC
Q 018675 136 CGRDKSVWIWEVMPGNE---FECVSVLQGH-AQD-VKMVQWHP--TMDVLFSCS-YDNTIKVWWAE 193 (352)
Q Consensus 136 ~~~d~~v~vwd~~~~~~---~~~~~~~~~h-~~~-v~~~~~~~--~~~~l~s~~-~d~~i~iw~~~ 193 (352)
+++||+|.-|.-.-... ...+ .+... ... -+.+++.. .+.+|..+. ..++|.++|-.
T Consensus 106 ~tEdGTisaW~p~v~~t~~~~~~~-~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~ 170 (336)
T TIGR03118 106 VTEDGTLSGWAPALGTTRMTRAEI-VVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGS 170 (336)
T ss_pred EeCCceEEeecCcCCcccccccEE-EEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCc
Confidence 89999999998432221 0111 11111 111 23444443 345666554 36788888643
No 439
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=61.63 E-value=66 Score=24.11 Aligned_cols=103 Identities=11% Similarity=0.101 Sum_probs=54.6
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeee----eeeeeecceecceEEE---EECCC--CCEEEEEeCCCcEEEEEccCCcee
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWN----CKAVLEEMHTRTVRSC---AWSPS--GKLLATASFDATTCIWEDVGGDYE 109 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~----~~~~~~~~h~~~v~~~---~~s~~--~~~l~s~~~d~~i~i~~~~~~~~~ 109 (352)
.+.|+.+..-+.|.|.+......... ....+. -...|+++ .|.|+ ...|+.|+ ...+..||.....-.
T Consensus 10 ~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN--in~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N~d~ 86 (136)
T PF14781_consen 10 HPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN--INQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENNSDL 86 (136)
T ss_pred ceeEEEEecCCEEEEECCCccccccccccCceeEEE--CCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccCchh
Confidence 46788888888999998664321100 001111 12344444 45542 34566665 456778987654221
Q ss_pred eeEeeccccCCeeEEEECC---CCcEEEEeeCCCcEEEEec
Q 018675 110 CVATLEGHENEVKSVSWNA---SGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 110 ~~~~~~~h~~~v~~v~~~~---~~~~l~s~~~d~~v~vwd~ 147 (352)
.. +.-...|+++.+-. ...-++-.+.+..|.-+|.
T Consensus 87 Fy---ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~ 124 (136)
T PF14781_consen 87 FY---KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDY 124 (136)
T ss_pred hh---hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCC
Confidence 11 22346788887732 1223444555566766664
No 440
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=61.61 E-value=25 Score=32.59 Aligned_cols=61 Identities=8% Similarity=0.212 Sum_probs=42.6
Q ss_pred cCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 277 SREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 277 ~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
..+|++++++..|.+++|+.-.. . ...-..+....|-.+..+.+|+.+||||- ..+.+-|+
T Consensus 571 TesGyIa~as~kGDirLyDRig~------r---AKtalP~lG~aIk~idvta~Gk~ilaTCk--~yllL~d~ 631 (776)
T COG5167 571 TESGYIAAASRKGDIRLYDRIGK------R---AKTALPGLGDAIKHIDVTANGKHILATCK--NYLLLTDV 631 (776)
T ss_pred ccCceEEEecCCCceeeehhhcc------h---hhhcCcccccceeeeEeecCCcEEEEeec--ceEEEEec
Confidence 45789999999999999954321 0 11123456678999999999998888873 45555554
No 441
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=60.12 E-value=2.3e+02 Score=29.80 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=77.4
Q ss_pred ccEEEEe-----eCC----CeEEEEecCC-----C--ceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 39 APVFASC-----SGD----KTVRIWEQSA-----S--SRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 39 ~~~l~s~-----s~D----~~v~~w~~~~-----~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
.+++|.| |.| |.+.|+++.. + ..-.+.+...++..+++|.+++ .-+|.++. + ...+|.+|+
T Consensus 1046 k~ylavGT~~~~gEDv~~RGr~hi~diIeVVPepgkP~t~~KlKel~~eE~KGtVsavc-eV~G~l~~-~-~GqKI~v~~ 1122 (1366)
T KOG1896|consen 1046 KPYLAVGTAFIQGEDVPARGRIHIFDIIEVVPEPGKPFTKNKLKELYIEEQKGTVSAVC-EVRGHLLS-S-QGQKIIVRK 1122 (1366)
T ss_pred cceEEEEEeecccccccCcccEEEEEEEEecCCCCCCcccceeeeeehhhcccceEEEE-EeccEEEE-c-cCcEEEEEE
Confidence 4677766 344 7888998532 2 2223344555556677887765 22455443 3 336788888
Q ss_pred c-cCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec--CccCeeEEEEcCCCC--E
Q 018675 103 D-VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG--HAQDVKMVQWHPTMD--V 177 (352)
Q Consensus 103 ~-~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~--~ 177 (352)
. ..+....+.-+.- ++.......-.++|+.|.--+.+.+...+.... .+..+.. ..-++.++.|--++. .
T Consensus 1123 l~r~~~ligVaFiD~---~~yv~s~~~vknlIl~gDV~ksisfl~fqeep~--rlsL~srd~~~l~v~s~EFLVdg~~L~ 1197 (1366)
T KOG1896|consen 1123 LDRDSELIGVAFIDL---PLYVHSMKVVKNLILAGDVMKSISFLGFQEEPY--RLSLLSRDFEPLNVYSTEFLVDGSNLS 1197 (1366)
T ss_pred eccCCcceeeEEecc---ceeEEehhhhhhheehhhhhhceEEEEEccCce--EEEEeecCCchhhceeeeeEEcCCeeE
Confidence 7 3333333332221 122222222345666666555566555433221 1222221 223566777776665 4
Q ss_pred EEEEeCCCcEEEEec
Q 018675 178 LFSCSYDNTIKVWWA 192 (352)
Q Consensus 178 l~s~~~d~~i~iw~~ 192 (352)
++++..++.|++|.-
T Consensus 1198 flvsDa~rNi~vy~Y 1212 (1366)
T KOG1896|consen 1198 FLVSDADRNIHVYMY 1212 (1366)
T ss_pred EEEEcCCCcEEEEEe
Confidence 678888999988853
No 442
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.51 E-value=1.2e+02 Score=26.25 Aligned_cols=51 Identities=10% Similarity=0.202 Sum_probs=27.6
Q ss_pred ccEEEEeeCC-----CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 39 APVFASCSGD-----KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 39 ~~~l~s~s~D-----~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+.+|...-+| |.|-|||...+.. + ...+ ..|.-.-..+.|.+||+.++.+.
T Consensus 125 G~~LYATEndfd~~rGViGvYd~r~~fq--r-vgE~-~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 125 GRLLYATENDFDPNRGVIGVYDAREGFQ--R-VGEF-STHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred CcEEEeecCCCCCCCceEEEEecccccc--e-eccc-ccCCcCcceeEEecCCcEEEEeC
Confidence 3455555444 6677777653321 1 1111 11322335678999999988764
No 443
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=57.67 E-value=1.1e+02 Score=28.29 Aligned_cols=156 Identities=12% Similarity=0.117 Sum_probs=75.5
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC----Cee-EEEECCCCcEEEEeeCCCcEEEE-ecCCC
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN----EVK-SVSWNASGTLLATCGRDKSVWIW-EVMPG 150 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~----~v~-~v~~~~~~~~l~s~~~d~~v~vw-d~~~~ 150 (352)
|..+-+.|||+.+-.-+. ..+.+++......+.........+ .|+ .+..-..|..++.++.||-|.-| |++.+
T Consensus 223 v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~ 301 (733)
T COG4590 223 VSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRD 301 (733)
T ss_pred hHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeecC
Confidence 445677888886654333 566677654332221111111111 122 11112235567888999988887 44433
Q ss_pred Ce--eEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 151 NE--FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 151 ~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
.. ...++.++-...++..+.=..+.+.+++-+..|++..+....... +..+. --..+.-+++||.+.+
T Consensus 302 ~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~--------lL~~~--~~~~~~~~~~Sp~~~~ 371 (733)
T COG4590 302 GQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKL--------LLFER--AYQAPQLVAMSPNQAY 371 (733)
T ss_pred CCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcc--------eehhh--hhcCcceeeeCcccch
Confidence 22 111111111111121111111233466667777777764332210 11010 0123455889999999
Q ss_pred EEEEeCCCcEEEEcCC
Q 018675 229 LVSCSDDLTIKIWGAD 244 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~ 244 (352)
+++-. .|.++++.++
T Consensus 372 Ll~e~-~gki~~~~l~ 386 (733)
T COG4590 372 LLSED-QGKIRLAQLE 386 (733)
T ss_pred heeec-CCceEEEEec
Confidence 88654 4779998765
No 444
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=57.39 E-value=1.1e+02 Score=28.87 Aligned_cols=73 Identities=19% Similarity=0.312 Sum_probs=47.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEc---------cCCc--eeeeEe-----e--ccccCCeeEEEECCCC---cEEE
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWED---------VGGD--YECVAT-----L--EGHENEVKSVSWNASG---TLLA 134 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~---------~~~~--~~~~~~-----~--~~h~~~v~~v~~~~~~---~~l~ 134 (352)
.|.-+..++.|..++-.+.+|.+.++-. ..++ ..|... + ....=.+..++|+|+. ..|+
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 4667888999999998888987765531 1111 111111 0 0111235678899965 5777
Q ss_pred EeeCCCcEEEEecC
Q 018675 135 TCGRDKSVWIWEVM 148 (352)
Q Consensus 135 s~~~d~~v~vwd~~ 148 (352)
.-+.|+.+++|++.
T Consensus 185 iL~sdnviRiy~lS 198 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLS 198 (741)
T ss_pred EEecCcEEEEEecC
Confidence 88899999999974
No 445
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=54.07 E-value=1.3e+02 Score=25.15 Aligned_cols=139 Identities=10% Similarity=0.107 Sum_probs=68.9
Q ss_pred ecceEEEEECCCCCEEEEEeCC---------CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcE-EEEeeCCCcEE
Q 018675 74 TRTVRSCAWSPSGKLLATASFD---------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVW 143 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d---------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~ 143 (352)
+.+.+....+|+|++.+--..| +.++.|.. .... ..+...-.--+.++|+.+.+. -+.-+.+-+|.
T Consensus 108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~-~h~v---~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~ 183 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLA-GHQV---ELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVD 183 (310)
T ss_pred hcccccCccCCCCceeeeeeccccccccccccEEEEecc-CCCc---eeeehhccCCccccccccCcEEEEEccCceEEe
Confidence 3456777889999996533333 22223211 1111 111111223357788876664 44556777888
Q ss_pred EEe--cCCCCeeE--EEEEeecC---c-cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 144 IWE--VMPGNEFE--CVSVLQGH---A-QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 144 vwd--~~~~~~~~--~~~~~~~h---~-~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
.|| .+.+.... .+..+... . ..--.++..-++.+.++.-..++|...|.... +.++++. --..
T Consensus 184 a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tG-----K~L~eik----lPt~ 254 (310)
T KOG4499|consen 184 AYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTG-----KILLEIK----LPTP 254 (310)
T ss_pred eeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCC-----cEEEEEE----cCCC
Confidence 888 43332111 11112111 0 01112333445666666667777777754332 2333332 1256
Q ss_pred cEEEEEEcCC
Q 018675 216 TIWALSFNAK 225 (352)
Q Consensus 216 ~i~~l~~~~~ 225 (352)
.|++++|-..
T Consensus 255 qitsccFgGk 264 (310)
T KOG4499|consen 255 QITSCCFGGK 264 (310)
T ss_pred ceEEEEecCC
Confidence 7999999644
No 446
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=53.80 E-value=2e+02 Score=27.20 Aligned_cols=78 Identities=17% Similarity=0.328 Sum_probs=44.6
Q ss_pred eEEEEecCCc-eEEecCCCCeEEEEEcc---CCccccCc-c---------cceeeecccccCcceeEEEecCCC--cceE
Q 018675 271 IFSVHWSREG-IIASGAADDSVQFFVES---KDDLIDGP-S---------YKMLLKKEKAHDMDVNSVQWSPGE--RRLL 334 (352)
Q Consensus 271 i~~~~~~~~~-~~~s~~~d~~v~~~~~~---~~~~~~~~-~---------~~~~~~~~~~h~~~i~~~~~sp~~--~~~l 334 (352)
+..+..++.| .++-.+.+|.+.++-.. ....+... . ..++. +... .-.+..++|+|+. ...|
T Consensus 106 V~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~f-tss~-~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 106 VYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFF-TSST-SLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceee-ccCC-ceeeeeccccCCccCCceE
Confidence 4556666655 56677778877766422 22222111 1 01111 1112 2357788999976 3345
Q ss_pred EEecCCCeEEEEeecc
Q 018675 335 ASASDDGMIKIWELAN 350 (352)
Q Consensus 335 ~s~~~Dg~i~iw~~~~ 350 (352)
.--..|.+||||+...
T Consensus 184 ~iL~sdnviRiy~lS~ 199 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLSE 199 (741)
T ss_pred EEEecCcEEEEEecCC
Confidence 5677799999999864
No 447
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=50.30 E-value=33 Score=31.38 Aligned_cols=165 Identities=17% Similarity=0.198 Sum_probs=77.4
Q ss_pred ccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCC-CcccEE-EEEEcCCCCEEEEEeCCCcEEE
Q 018675 163 AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNG-HSSTIW-ALSFNAKGDKLVSCSDDLTIKI 240 (352)
Q Consensus 163 ~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-h~~~i~-~l~~~~~~~~l~s~~~dg~i~i 240 (352)
...+..+-..|+++.+..-+. ..+.++++....-.. ..+.....+ ....|. ++..-.-|..+..+..||-|.-
T Consensus 220 ~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~----rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQ 294 (733)
T COG4590 220 FSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQI----RKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQ 294 (733)
T ss_pred ccchHhhEECCCCCEEEEecC-CeEEEEeecccccch----hhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceee
Confidence 345566678899998776655 667777654321111 011111011 001111 1111123455778888998888
Q ss_pred E-cCCccccccCCCCccceeeEEeecccCcceEEEEecC-CceEEecCCCCeEEEEEccCCccccCcccceeeecccccC
Q 018675 241 W-GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHD 318 (352)
Q Consensus 241 w-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~ 318 (352)
| |.+.... ........+. ....++..+.... ...+++-..+|++..+..... +.++.+ .--
T Consensus 295 WFdvr~~~~------p~l~h~R~f~-l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~--------~~lL~~--~~~ 357 (733)
T COG4590 295 WFDVRRDGQ------PHLNHIRNFK-LAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSE--------KLLLFE--RAY 357 (733)
T ss_pred eeeeecCCC------Ccceeeeccc-cCcccceeeccccccceEEEEcCCCceeeeecccC--------cceehh--hhh
Confidence 7 3321110 0001111110 1111122221111 124566667777766533221 111111 111
Q ss_pred cceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 319 MDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 319 ~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
..+.-+++||.+..++ .-..|.++++.++|.
T Consensus 358 ~~~~~~~~Sp~~~~Ll--~e~~gki~~~~l~Nr 388 (733)
T COG4590 358 QAPQLVAMSPNQAYLL--SEDQGKIRLAQLENR 388 (733)
T ss_pred cCcceeeeCcccchhe--eecCCceEEEEecCC
Confidence 2566788999876543 455678999998875
No 448
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=50.21 E-value=1.8e+02 Score=25.76 Aligned_cols=132 Identities=14% Similarity=0.107 Sum_probs=65.1
Q ss_pred CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe----------CCCcEEEEEccCCceeeeEeecc-c
Q 018675 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLEG-H 117 (352)
Q Consensus 49 ~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~i~~~~~~~~~~~~~~~~-h 117 (352)
+.+.+.|.++++.+ ..+ -.+..-.+.++|+++.+.+++ -...|.+||..+-....-..+.. |
T Consensus 17 ~rv~viD~d~~k~l----Gmi---~~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~ 89 (342)
T PF06433_consen 17 SRVYVIDADSGKLL----GMI---DTGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKP 89 (342)
T ss_dssp EEEEEEETTTTEEE----EEE---EEESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-
T ss_pred ceEEEEECCCCcEE----EEe---ecccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcc
Confidence 36778887665322 212 223334466899999887653 22357888876543221122222 1
Q ss_pred cC----CeeEEEECCCCcEEEEe--eCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC-CCEEEEEeCCCcEEEE
Q 018675 118 EN----EVKSVSWNASGTLLATC--GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVW 190 (352)
Q Consensus 118 ~~----~v~~v~~~~~~~~l~s~--~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~iw 190 (352)
.. ....+.++.++++++.. +...+|.|-|+...+. +..+. ... |...-|. ...+.+...||.+.-.
T Consensus 90 R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kv---v~ei~--~PG--C~~iyP~~~~~F~~lC~DGsl~~v 162 (342)
T PF06433_consen 90 RAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKV---VGEID--TPG--CWLIYPSGNRGFSMLCGDGSLLTV 162 (342)
T ss_dssp B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEE---EEEEE--GTS--EEEEEEEETTEEEEEETTSCEEEE
T ss_pred hheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCce---eeeec--CCC--EEEEEecCCCceEEEecCCceEEE
Confidence 11 12344556666654433 3445666666643322 22211 111 2222232 2457788889988877
Q ss_pred ecCC
Q 018675 191 WAED 194 (352)
Q Consensus 191 ~~~~ 194 (352)
.+..
T Consensus 163 ~Ld~ 166 (342)
T PF06433_consen 163 TLDA 166 (342)
T ss_dssp EETS
T ss_pred EECC
Confidence 6653
No 449
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=49.67 E-value=2.1e+02 Score=26.19 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=61.1
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccce--eeEEee-cccCcceEEEEecCCceEEecCCCCe
Q 018675 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR--HLCTIS-GYHDRTIFSVHWSREGIIASGAADDS 290 (352)
Q Consensus 214 ~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~i~~~~~~~~~~~~s~~~d~~ 290 (352)
...+.++.+.+++..++++ .+|.+..=+ +.. ..|. ...... ......+..+.+.+++.+.+++.+|.
T Consensus 280 ~~~l~~v~~~~dg~l~l~g-~~G~l~~S~-d~G--------~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~ 349 (398)
T PLN00033 280 ARRIQNMGWRADGGLWLLT-RGGGLYVSK-GTG--------LTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGI 349 (398)
T ss_pred ccceeeeeEcCCCCEEEEe-CCceEEEec-CCC--------CcccccceeecccCCCCcceEEEEEcCCCcEEEEECCCc
Confidence 3568889999998877766 456544321 111 1110 011110 00122467777777777777777887
Q ss_pred EEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEE
Q 018675 291 VQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346 (352)
Q Consensus 291 v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw 346 (352)
+....... ..+... .....-..+++++.|.++++ .++ .|.+|.|.-|
T Consensus 350 v~~s~D~G------~tW~~~-~~~~~~~~~ly~v~f~~~~~-g~~-~G~~G~il~~ 396 (398)
T PLN00033 350 LLRSTDGG------KSWKRD-KGADNIAANLYSVKFFDDKK-GFV-LGNDGVLLRY 396 (398)
T ss_pred EEEeCCCC------cceeEc-cccCCCCcceeEEEEcCCCc-eEE-EeCCcEEEEe
Confidence 66543221 111111 10112235688999977665 454 6678887655
No 450
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=48.83 E-value=1.8e+02 Score=25.14 Aligned_cols=93 Identities=10% Similarity=0.260 Sum_probs=52.5
Q ss_pred CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe------CCCcEEEEEccCCceeeeEe-e-ccccCC
Q 018675 49 KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS------FDATTCIWEDVGGDYECVAT-L-EGHENE 120 (352)
Q Consensus 49 ~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------~d~~i~i~~~~~~~~~~~~~-~-~~h~~~ 120 (352)
..|.+||....+ |.... ..-.+.|+++.|..+.++++.|. ....+..||..+..+..... . ..-.++
T Consensus 16 ~~lC~yd~~~~q--W~~~g---~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgp 90 (281)
T PF12768_consen 16 PGLCLYDTDNSQ--WSSPG---NGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGP 90 (281)
T ss_pred CEEEEEECCCCE--eecCC---CCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCc
Confidence 358889876532 33221 11357899999987777777775 34567788876654432221 0 112367
Q ss_pred eeEEEECC-CCc-EEEEee-C--CCcEEEEe
Q 018675 121 VKSVSWNA-SGT-LLATCG-R--DKSVWIWE 146 (352)
Q Consensus 121 v~~v~~~~-~~~-~l~s~~-~--d~~v~vwd 146 (352)
|..+.+.. +.. ..++|. . +..|..||
T Consensus 91 v~a~~~~~~d~~~~~~aG~~~~g~~~l~~~d 121 (281)
T PF12768_consen 91 VTALTFISNDGSNFWVAGRSANGSTFLMKYD 121 (281)
T ss_pred EEEEEeeccCCceEEEeceecCCCceEEEEc
Confidence 88887743 333 343332 2 23466665
No 451
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=48.73 E-value=43 Score=32.75 Aligned_cols=68 Identities=10% Similarity=0.213 Sum_probs=42.3
Q ss_pred cCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 018675 118 ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~ 191 (352)
...++++.-+|.++.++.++.||+|.+++..+-.+.+.. ... .+--.+.|.. .-|+++..|+.+.-|.
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~-~~~---~p~~nlv~tn--hgl~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKIC-EEA---KPKENLVFTN--HGLVTATSDRRALAWK 81 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhh-hhc---CCccceeeec--cceEEEeccchhheee
Confidence 345667777899999999999999999986443221111 111 1111223322 2367778888888884
No 452
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=48.09 E-value=40 Score=17.49 Aligned_cols=24 Identities=17% Similarity=0.262 Sum_probs=18.7
Q ss_pred EEEEeeCCCeEEEEecCCCceeee
Q 018675 41 VFASCSGDKTVRIWEQSASSRFWN 64 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~~ 64 (352)
.++.++.++.+...|..+++..|+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEE
Confidence 577778899999999887766554
No 453
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=47.26 E-value=2.5e+02 Score=26.43 Aligned_cols=104 Identities=11% Similarity=0.166 Sum_probs=54.1
Q ss_pred CCeEEEEecCCCceeeeeeeeeecc--------------ee-cce-EEEEECCCCCEEEEEeCCC---------------
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEM--------------HT-RTV-RSCAWSPSGKLLATASFDA--------------- 96 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~--------------h~-~~v-~~~~~s~~~~~l~s~~~d~--------------- 96 (352)
++.+.-.|..+++..|+....-... +. ..+ ...++.+.+..+..++.++
T Consensus 174 ~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~ 253 (488)
T cd00216 174 RGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNL 253 (488)
T ss_pred CcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCC
Confidence 6778888998888888654311000 00 001 1234444556666676554
Q ss_pred ---cEEEEEccCCceeeeEe-eccccC----CeeEEEEC----CCCc---EEEEeeCCCcEEEEecCCCCe
Q 018675 97 ---TTCIWEDVGGDYECVAT-LEGHEN----EVKSVSWN----ASGT---LLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 97 ---~i~i~~~~~~~~~~~~~-~~~h~~----~v~~v~~~----~~~~---~l~s~~~d~~v~vwd~~~~~~ 152 (352)
.+...|..+++.. ... ...|.. ......+. -++. .++.++.+|.+...|...++.
T Consensus 254 ~~~~l~Ald~~tG~~~-W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~ 323 (488)
T cd00216 254 YTDSIVALDADTGKVK-WFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKL 323 (488)
T ss_pred ceeeEEEEcCCCCCEE-EEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcE
Confidence 5777777766532 221 111110 00000010 1232 577788899999999877753
No 454
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=46.10 E-value=2.6e+02 Score=26.31 Aligned_cols=68 Identities=10% Similarity=0.138 Sum_probs=40.9
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeee-cceecceE--EEEECCCCCEEEEEeCCCcEEEEEccCCce
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLE-EMHTRTVR--SCAWSPSGKLLATASFDATTCIWEDVGGDY 108 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~-~~h~~~v~--~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~ 108 (352)
..++.++.|+.|.-.|..+++..|+...... ......+. .++.. ++..+..++.++.+..+|..+++.
T Consensus 62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~ 132 (488)
T cd00216 62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQ 132 (488)
T ss_pred CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCE
Confidence 4566677889999999988887776532111 00000110 01111 225677788899999999887753
No 455
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=43.44 E-value=3.8e+02 Score=27.41 Aligned_cols=78 Identities=17% Similarity=0.236 Sum_probs=47.3
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce-------eEe-----ee---eccCCCCcccEEEEEEcCCCCEE
Q 018675 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWH-------CVQ-----TI---SESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~-------~~~-----~~---~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
.|.|+.-+.+|+.+++|-.| ..+|.+.-...+.|. |+. .+ ......|+..|..++.......|
T Consensus 183 nV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDqsRg~l 260 (1263)
T COG5308 183 NVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQSRGLL 260 (1263)
T ss_pred eeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeecccccce
Confidence 56777777788888888777 566744322222221 100 00 01123466788888888777777
Q ss_pred EEEeCCCcEEEEcCC
Q 018675 230 VSCSDDLTIKIWGAD 244 (352)
Q Consensus 230 ~s~~~dg~i~iwd~~ 244 (352)
-+-.....|+-+.+.
T Consensus 261 y~Lr~kS~Vray~it 275 (1263)
T COG5308 261 YVLRKKSAVRAYSIT 275 (1263)
T ss_pred eeecccceeeeEeee
Confidence 777777778877653
No 456
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=41.91 E-value=3.2e+02 Score=26.11 Aligned_cols=66 Identities=14% Similarity=0.148 Sum_probs=40.0
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEE-------EEECCCCCEEEEEeCCCcEEEEEccCCce
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRS-------CAWSPSGKLLATASFDATTCIWEDVGGDY 108 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~-------~~~s~~~~~l~s~~~d~~i~i~~~~~~~~ 108 (352)
..++.++.++.|.-.|..+++.+|+........ ...+.+ +++ .+..++.++.|+.+...|..+++.
T Consensus 70 g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~-~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~ 142 (527)
T TIGR03075 70 GVMYVTTSYSRVYALDAKTGKELWKYDPKLPDD-VIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKV 142 (527)
T ss_pred CEEEEECCCCcEEEEECCCCceeeEecCCCCcc-cccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCE
Confidence 456667778888888999988888754321100 001111 122 234566677888888888877753
No 457
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=41.72 E-value=48 Score=20.43 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=15.6
Q ss_pred ceEEEEECCCCCEEEEEeC
Q 018675 76 TVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~ 94 (352)
.+.++++-|||++++.|..
T Consensus 2 ~~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGYV 20 (55)
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 3577889999999998864
No 458
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=41.69 E-value=67 Score=31.56 Aligned_cols=67 Identities=13% Similarity=0.259 Sum_probs=41.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEe
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd 146 (352)
..+++++-+|.|+.++.+..||+|++|+...-....+.+. ..+-..+.|...| |+++..|+.+.-|.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~---~~p~~nlv~tnhg--l~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEE---AKPKENLVFTNHG--LVTATSDRRALAWK 81 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhh---cCCccceeeeccc--eEEEeccchhheee
Confidence 4567778889999999999999999998643221112111 1122234444333 55666666666675
No 459
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.34 E-value=4.4e+02 Score=27.59 Aligned_cols=28 Identities=25% Similarity=0.336 Sum_probs=24.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEc
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWED 103 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 103 (352)
....++|+|...++|.+...|.+.+|-.
T Consensus 37 ~~~~~afD~~q~llai~t~tg~i~~yg~ 64 (993)
T KOG1983|consen 37 TPSALAFDPTQGLLAIGTRTGAIKIYGQ 64 (993)
T ss_pred CCcceeeccccceEEEEEecccEEEecc
Confidence 4456889999999999999999999854
No 460
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=38.97 E-value=62 Score=32.00 Aligned_cols=91 Identities=21% Similarity=0.423 Sum_probs=50.3
Q ss_pred EEECCCCCEEEEEeCCC-----cEEEEEccCCceee--eEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe
Q 018675 80 CAWSPSGKLLATASFDA-----TTCIWEDVGGDYEC--VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 80 ~~~s~~~~~l~s~~~d~-----~i~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 152 (352)
++|-|+|..+++-+.|| .+..+.. +| ... ...-.+.+..+..++|+.....++ .+..+.+++|.......
T Consensus 252 LSWkpqgS~~ati~td~~~~S~~ViFfEr-NG-LrHGef~lr~~~dEk~~~~~wn~~s~vla-v~~~n~~~lwttkNyhW 328 (1243)
T COG5290 252 LSWKPQGSKYATIGTDGCSTSESVIFFER-NG-LRHGEFDLRVGCDEKAFLENWNLLSTVLA-VAEGNLLKLWTTKNYHW 328 (1243)
T ss_pred cccccCCceeeeeccCCCCCcceEEEEcc-CC-cccCCccccCCchhhhhhhhhhHHHHHHH-HhhcceEEEEEccceEE
Confidence 78999999999876554 2434432 21 100 001123345567778876555444 34456799998643322
Q ss_pred eEEEEEeecCccCeeEEEEcCCCC
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
+- ...-....+.-+.|+|...
T Consensus 329 YL---K~e~~ip~~s~vkwhpe~~ 349 (1243)
T COG5290 329 YL---KVERQIPGISYVKWHPEEK 349 (1243)
T ss_pred EE---EEeecCCCcceeeeccccC
Confidence 21 1112234566788999754
No 461
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=38.41 E-value=59 Score=16.69 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=18.1
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEe
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWE 55 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~ 55 (352)
+.|.+++..+ .+++.+-.-+.+|+|.
T Consensus 2 E~i~aia~g~--------~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGD--------SWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccC--------CEEEEEeCCCeEEecC
Confidence 3567777665 3677777778888873
No 462
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=36.63 E-value=3.4e+02 Score=24.86 Aligned_cols=112 Identities=13% Similarity=0.161 Sum_probs=54.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEc
Q 018675 217 IWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 296 (352)
Q Consensus 217 i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~ 296 (352)
...+...+++.+++.+.....++-||- +...|.... ......+.++.+.+++.++.++.+|.+..-..
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~---------G~~~W~~~~---~~~~~~l~~v~~~~dg~l~l~g~~G~l~~S~d 308 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEP---------GQPYWQPHN---RASARRIQNMGWRADGGLWLLTRGGGLYVSKG 308 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCC---------CCcceEEec---CCCccceeeeeEcCCCCEEEEeCCceEEEecC
Confidence 445566777776666654433444432 111122221 11234567777777776666667776554321
Q ss_pred cCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEE
Q 018675 297 SKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKI 345 (352)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~i 345 (352)
... -.......+.. ...-...++++.|.+++. ++ .+|.+|.+..
T Consensus 309 ~G~-~~~~~~f~~~~--~~~~~~~l~~v~~~~d~~-~~-a~G~~G~v~~ 352 (398)
T PLN00033 309 TGL-TEEDFDFEEAD--IKSRGFGILDVGYRSKKE-AW-AAGGSGILLR 352 (398)
T ss_pred CCC-cccccceeecc--cCCCCcceEEEEEcCCCc-EE-EEECCCcEEE
Confidence 110 00000001100 011124589999988764 44 5666787655
No 463
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=36.14 E-value=2.9e+02 Score=23.89 Aligned_cols=52 Identities=12% Similarity=0.376 Sum_probs=34.9
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee------CCCcEEEEecCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG------RDKSVWIWEVMP 149 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~------~d~~v~vwd~~~ 149 (352)
..+++||..+.++.... .+-.+.|+++.|..+.+++++|. ....+..||...
T Consensus 16 ~~lC~yd~~~~qW~~~g--~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~ 73 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPG--NGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKN 73 (281)
T ss_pred CEEEEEECCCCEeecCC--CCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCC
Confidence 46889987766543322 23457899999987667777664 355677888754
No 464
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=35.42 E-value=3.5e+02 Score=24.75 Aligned_cols=30 Identities=17% Similarity=0.361 Sum_probs=24.7
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 215 STIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
..|.++...+..+.+.+-+.+|.|.+|++.
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~ 219 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLG 219 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEe
Confidence 349999999999999999999999999985
No 465
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=33.45 E-value=5.2e+02 Score=26.11 Aligned_cols=31 Identities=13% Similarity=0.358 Sum_probs=23.3
Q ss_pred ccCCeeEEEECCCCcEEEEeeCCCcEEEEec
Q 018675 117 HENEVKSVSWNASGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 117 h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~ 147 (352)
-...|-+.+|+.|-+.++....+..|.+++-
T Consensus 111 v~nGIvaa~wS~DE~~~cvvt~~r~il~~~k 141 (1243)
T COG5290 111 VSNGIVAASWSADEKTWCVVTSTREILLFDK 141 (1243)
T ss_pred ccCceEEEeeccCCceEEEEEcCceEEEEec
Confidence 3467778899999887776667778888763
No 466
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=32.76 E-value=5.8e+02 Score=26.42 Aligned_cols=75 Identities=17% Similarity=0.190 Sum_probs=46.2
Q ss_pred cCCeeEEEECCCC---c---EEEEeeCCCcEEEEecCCCCeeEEEEEeec--CccCeeEEEEcCCCCEEEEEeCCCcEEE
Q 018675 118 ENEVKSVSWNASG---T---LLATCGRDKSVWIWEVMPGNEFECVSVLQG--HAQDVKMVQWHPTMDVLFSCSYDNTIKV 189 (352)
Q Consensus 118 ~~~v~~v~~~~~~---~---~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~i~i 189 (352)
...|.|+.++|-| + +++.|.++..+.+--..+.....+...+.+ -...|.-..+-.+..+|.++..||.+..
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~ 609 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLY 609 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEE
Confidence 4679999999743 2 788888888777655443332222111111 1123444455555778999999999988
Q ss_pred Eec
Q 018675 190 WWA 192 (352)
Q Consensus 190 w~~ 192 (352)
|-+
T Consensus 610 fv~ 612 (1096)
T KOG1897|consen 610 FVL 612 (1096)
T ss_pred EEE
Confidence 754
No 467
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=32.07 E-value=10 Score=34.86 Aligned_cols=143 Identities=19% Similarity=0.239 Sum_probs=81.8
Q ss_pred eeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCC
Q 018675 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL-FSCSYDNTIKVWWAEDTDSDN 199 (352)
Q Consensus 121 v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~iw~~~~~~~~~ 199 (352)
.....|.|.+.-++.++.+..+..||-. ++. .... ..+.....++|.-+++.+ +.+-..+.+.+||+...-.
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~---~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eyt-- 109 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKA-GQV---ILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYT-- 109 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhh-cce---eccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhH--
Confidence 3455677766657777778888888842 211 1111 122344556676666654 4555678899998754311
Q ss_pred ceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC
Q 018675 200 WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE 279 (352)
Q Consensus 200 ~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 279 (352)
+.++ ....|.... +.|++-...++-+-..|.+.|+.....++.... +.|...+..+++...
T Consensus 110 ----qqLE-~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~------------Gkh~RRgtq~av~lE 170 (615)
T KOG2247|consen 110 ----QQLE-SGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVM------------GKHQRRGTQIAVTLE 170 (615)
T ss_pred ----HHHh-ccCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhh------------cccccceeEEEeccc
Confidence 1121 111222333 678888888888888899999976544332211 223444555666666
Q ss_pred ceEEecCCCC
Q 018675 280 GIIASGAADD 289 (352)
Q Consensus 280 ~~~~s~~~d~ 289 (352)
++.+.++.|.
T Consensus 171 d~vil~dcd~ 180 (615)
T KOG2247|consen 171 DYVILCDCDN 180 (615)
T ss_pred ceeeecCcHH
Confidence 6655555554
No 468
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=31.83 E-value=94 Score=17.03 Aligned_cols=25 Identities=8% Similarity=0.194 Sum_probs=19.3
Q ss_pred EEEeeCCCeEEEEecCCCceeeeee
Q 018675 42 FASCSGDKTVRIWEQSASSRFWNCK 66 (352)
Q Consensus 42 l~s~s~D~~v~~w~~~~~~~~~~~~ 66 (352)
+..+..||.+.-.|..+++..|+..
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCCEEEeee
Confidence 3444889999999999988877653
No 469
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=31.41 E-value=4.3e+02 Score=24.53 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=23.4
Q ss_pred cceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 319 MDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 319 ~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.=|++|..|.|++.|++++=.+|.||.||+..+
T Consensus 312 ~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 312 PLITDILISLDDRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp -----EEE-TTS-EEEEEETTTTEEEEEE-SST
T ss_pred CceEeEEEccCCCEEEEEcccCCcEEEEecCCC
Confidence 458999999999999999999999999999875
No 470
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=31.01 E-value=2e+02 Score=22.48 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=27.9
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCC
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA 58 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~ 58 (352)
.|.+++|+|..-....+-+||....++.|.||....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 788999999643233357888889999999997654
No 471
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=30.72 E-value=2.3e+02 Score=21.28 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=40.2
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEccCCc------eeeeEeeccccCCeeEEEECC-----CCcEEEEeeCCCcEEEEecC
Q 018675 80 CAWSPSGKLLATASFDATTCIWEDVGGD------YECVATLEGHENEVKSVSWNA-----SGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 80 ~~~s~~~~~l~s~~~d~~i~i~~~~~~~------~~~~~~~~~h~~~v~~v~~~~-----~~~~l~s~~~d~~v~vwd~~ 148 (352)
..|.....-|+.++.-++|.|++..... ...+..+. -+..|++++-.+ ....|+.|+. .++..||+.
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~ 81 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVE 81 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEcc
Confidence 3455566677778888888888643221 11223332 345677775433 2345665554 568899986
Q ss_pred CC
Q 018675 149 PG 150 (352)
Q Consensus 149 ~~ 150 (352)
..
T Consensus 82 ~N 83 (136)
T PF14781_consen 82 NN 83 (136)
T ss_pred cC
Confidence 43
No 472
>PRK13615 lipoprotein LpqB; Provisional
Probab=29.43 E-value=5.3e+02 Score=24.92 Aligned_cols=158 Identities=11% Similarity=-0.042 Sum_probs=79.3
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE
Q 018675 78 RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS 157 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 157 (352)
.+.+.+++++.+|....++.+.++.... . ....+.+ ...+.-+|.+++- +=+.-.+...++...........+.
T Consensus 337 ~s~avS~dg~~~A~v~~~~~l~vg~~~~-~--~~~~~~~--~~Lt~PS~d~~g~-vWtv~~g~~~~l~~~~~~G~~~~v~ 410 (557)
T PRK13615 337 DAATLSADGRQAAVRNASGVWSVGDGDR-D--AVLLDTR--PGLVAPSLDAQGY-VWSTPASDPRGLVAWGPDGVGHPVA 410 (557)
T ss_pred ccceEcCCCceEEEEcCCceEEEecCCC-c--ceeeccC--CccccCcCcCCCC-EEEEeCCCceEEEEecCCCceEEee
Confidence 6788999999988877777666654321 1 1111221 2345556666653 2233332233433322211111111
Q ss_pred EeecCccCeeEEEEcCCCCEEEEEeC---CCcEEEEecCCCCCCCceeE-eeeeccCCCCcccEEEEEEcCCCCEEEEEe
Q 018675 158 VLQGHAQDVKMVQWHPTMDVLFSCSY---DNTIKVWWAEDTDSDNWHCV-QTISESNNGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 158 ~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
.--.-...|..+..+++|..++.-.. .+.|.+--+....... ..+ ........+.. .+.++.|..++.+.+.+.
T Consensus 411 v~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~P-~~L~~~p~~l~~~l~-~v~sl~W~~~~~laVl~~ 488 (557)
T PRK13615 411 VSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVP-TSLTTTPLELLASPG-TPLDATWVDELDVATLTL 488 (557)
T ss_pred ccccCCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCcc-eEeeeccEEcccCcC-cceeeEEcCCCEEEEEec
Confidence 11111246999999999987665432 3556655443311111 111 11111112233 788999999988766552
Q ss_pred ---CCCcEEEEcC
Q 018675 234 ---DDLTIKIWGA 243 (352)
Q Consensus 234 ---~dg~i~iwd~ 243 (352)
.+..+++..+
T Consensus 489 ~~~~~~~v~~v~v 501 (557)
T PRK13615 489 APDGERQVELHQV 501 (557)
T ss_pred cCCCCceEEEEEC
Confidence 3345655554
No 473
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=28.30 E-value=7.5e+02 Score=26.36 Aligned_cols=117 Identities=9% Similarity=0.044 Sum_probs=64.3
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
.-++.|..++-.. -+|+++ ....|.+|+++....+. .... -.-+++..+...-+++|+.|..-..|
T Consensus 1095 E~KGtVsavceV~--------G~l~~~-~GqKI~v~~l~r~~~li-gVaF----iD~~~yv~s~~~vknlIl~gDV~ksi 1160 (1366)
T KOG1896|consen 1095 EQKGTVSAVCEVR--------GHLLSS-QGQKIIVRKLDRDSELI-GVAF----IDLPLYVHSMKVVKNLILAGDVMKSI 1160 (1366)
T ss_pred hcccceEEEEEec--------cEEEEc-cCcEEEEEEeccCCcce-eeEE----eccceeEEehhhhhhheehhhhhhce
Confidence 4567777766432 356775 56789999985443221 1111 12233333334445667777666666
Q ss_pred EEEEccCCceeeeEeec-cccCCeeEEEECCCCc--EEEEeeCCCcEEEEecCC
Q 018675 99 CIWEDVGGDYECVATLE-GHENEVKSVSWNASGT--LLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~--~l~s~~~d~~v~vwd~~~ 149 (352)
.+.-...........-+ ...-.+.++.|--+|. .|+.+..|+.|.++--.+
T Consensus 1161 sfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~P 1214 (1366)
T KOG1896|consen 1161 SFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYAP 1214 (1366)
T ss_pred EEEEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeCC
Confidence 65543322222111111 1223577888866554 478888999999987543
No 474
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=26.50 E-value=3.9e+02 Score=22.48 Aligned_cols=138 Identities=12% Similarity=0.156 Sum_probs=61.3
Q ss_pred EEEEccCCceeeeEeeccccCCeeEE--EECCCCcEEEEeeCC---CcEEEEecCCCC-eeEEEEE--eecCccCeeEEE
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSV--SWNASGTLLATCGRD---KSVWIWEVMPGN-EFECVSV--LQGHAQDVKMVQ 170 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v--~~~~~~~~l~s~~~d---~~v~vwd~~~~~-~~~~~~~--~~~h~~~v~~~~ 170 (352)
.+||..+++...+... ..+.|- .+-++|.++.+|+.- ..+++++..... ....... .......--.+.
T Consensus 49 ~~yD~~tn~~rpl~v~----td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~ 124 (243)
T PF07250_consen 49 VEYDPNTNTFRPLTVQ----TDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTAT 124 (243)
T ss_pred EEEecCCCcEEeccCC----CCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccce
Confidence 3677776655443221 122222 345789999888752 457777643200 0000000 000111111334
Q ss_pred EcCCCCEEEEEeCCC-cEEEEecCCCCCCCceeEeeeeccCCCCc-ccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 171 WHPTMDVLFSCSYDN-TIKVWWAEDTDSDNWHCVQTISESNNGHS-STIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
.-|+++.++.|+... ...+|.-........ ....+........ .-=.-+-.-|+|+.++.+..+..| ||.
T Consensus 125 ~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~-~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i--~d~ 196 (243)
T PF07250_consen 125 TLPDGRVLIVGGSNNPTYEFWPPKGPGPGPV-TLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSII--YDY 196 (243)
T ss_pred ECCCCCEEEEeCcCCCcccccCCccCCCCce-eeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEE--EeC
Confidence 457888888887764 344443211111111 1111110000000 111124556899988888766544 454
No 475
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=26.02 E-value=4.3e+02 Score=23.01 Aligned_cols=69 Identities=17% Similarity=0.335 Sum_probs=39.8
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC-C----eeEEEECCCCcEEEEeeCCCcEEEEec
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN-E----VKSVSWNASGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~-~----v~~v~~~~~~~~l~s~~~d~~v~vwd~ 147 (352)
++++...++|.+|++.-.-.+|.+.+..+++. +-.+.+... . -..++|-.+-.++-....+++|.++|=
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I--~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKI--IWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcE--EEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 67788888899999887777777776555532 333433311 0 111233223333434456778888874
No 476
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=25.42 E-value=2.3e+02 Score=19.48 Aligned_cols=42 Identities=14% Similarity=0.133 Sum_probs=23.6
Q ss_pred eeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 45 CSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 45 ~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
+..+|.+.-||+.+++.. .... .-...+.+++++|+..++.+
T Consensus 33 ~~~~GRll~ydp~t~~~~----vl~~--~L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETT----VLLD--GLYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp T---EEEEEEETTTTEEE----EEEE--EESSEEEEEE-TTSSEEEEE
T ss_pred CCCCcCEEEEECCCCeEE----Eehh--CCCccCeEEEcCCCCEEEEE
Confidence 345677777888776421 1111 11356889999999977655
No 477
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=25.36 E-value=4.7e+02 Score=23.00 Aligned_cols=204 Identities=15% Similarity=0.230 Sum_probs=99.7
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceee---eeeeeee----cceecceEEEEECCCC---------
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW---NCKAVLE----EMHTRTVRSCAWSPSG--------- 86 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~---~~~~~~~----~~h~~~v~~~~~s~~~--------- 86 (352)
.=|.|+++|. +++-++...-+...+|+........ .....+. ..-....+.+.|+...
T Consensus 24 N~WGia~~p~------~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~ 97 (336)
T TIGR03118 24 NAWGLSYRPG------GPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGI 97 (336)
T ss_pred ccceeEecCC------CCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCc
Confidence 4478999996 4677777777899999875211000 0010110 0011233444444321
Q ss_pred ---CEEEEEeCCCcEEEEEccCCce---eeeEeec-cccCCe-eEEEEC--CCCcEEEEee-CCCcEEEEecCCCCeeEE
Q 018675 87 ---KLLATASFDATTCIWEDVGGDY---ECVATLE-GHENEV-KSVSWN--ASGTLLATCG-RDKSVWIWEVMPGNEFEC 155 (352)
Q Consensus 87 ---~~l~s~~~d~~i~i~~~~~~~~---~~~~~~~-~h~~~v-~~v~~~--~~~~~l~s~~-~d~~v~vwd~~~~~~~~~ 155 (352)
-.++.+++||+|.-|...-+.. .....+. ...+.| +.+++. ..+++|..+. ..++|.|+|-.-.+
T Consensus 98 ~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~---- 173 (336)
T TIGR03118 98 TGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRP---- 173 (336)
T ss_pred ccceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCcccc----
Confidence 2357788999999997432221 1112222 112333 345554 3356665553 57899999843111
Q ss_pred EEEeecCccC-------------------eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCccc
Q 018675 156 VSVLQGHAQD-------------------VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216 (352)
Q Consensus 156 ~~~~~~h~~~-------------------v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (352)
+..-.....+ |+-..-.++...=+.+..-|.|-+|+.... .++++. ..+.-+.
T Consensus 174 ~~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~------l~~r~a--s~g~LNa 245 (336)
T TIGR03118 174 PPLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQ------LLRRVA--SSGRLNA 245 (336)
T ss_pred ccCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCc------EEEEec--cCCcccC
Confidence 1000000000 111111111111123334457777754432 223231 1233455
Q ss_pred EEEEEEcC------CCCEEEEEeCCCcEEEEcCC
Q 018675 217 IWALSFNA------KGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 217 i~~l~~~~------~~~~l~s~~~dg~i~iwd~~ 244 (352)
-|.|+.-| .+.+|+.-=-||+|..||..
T Consensus 246 PWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~ 279 (336)
T TIGR03118 246 PWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQ 279 (336)
T ss_pred CceeeeChhhhCCCCCCeEEeecCCceeEEecCC
Confidence 66777644 46677765569999999965
No 478
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.19 E-value=7e+02 Score=24.96 Aligned_cols=172 Identities=14% Similarity=0.173 Sum_probs=0.0
Q ss_pred eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEee--ccccCCeeEEEEC
Q 018675 50 TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL--EGHENEVKSVSWN 127 (352)
Q Consensus 50 ~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~--~~h~~~v~~v~~~ 127 (352)
.++|++... ..-....-.|. .+....|+ +..-|+....||++.+|+..+...+.. .+ ......|..+.+.
T Consensus 65 ~I~If~~sG-----~lL~~~~w~~~-~lI~mgWs-~~eeLI~v~k~g~v~Vy~~~ge~ie~~-svg~e~~~~~I~ec~~f 136 (829)
T KOG2280|consen 65 YIRIFNISG-----QLLGRILWKHG-ELIGMGWS-DDEELICVQKDGTVHVYGLLGEFIESN-SVGFESQMSDIVECRFF 136 (829)
T ss_pred eEEEEeccc-----cchHHHHhcCC-Ceeeeccc-CCceEEEEeccceEEEeecchhhhccc-ccccccccCceeEEEEe
Q ss_pred CCCcEEEEeeCC-------CcEEEEecCCCC----eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 018675 128 ASGTLLATCGRD-------KSVWIWEVMPGN----EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196 (352)
Q Consensus 128 ~~~~~l~s~~~d-------~~v~vwd~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 196 (352)
.+|-.+++.+.+ ...++|.+.+-+ ...+...+..|.....-+.....--..+.......+..--+....
T Consensus 137 ~~GVavlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~ 216 (829)
T KOG2280|consen 137 HNGVAVLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPN 216 (829)
T ss_pred cCceEEEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCC
Q ss_pred CCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
+.+..+..||++++|+--..+|.|.+-+.++.+
T Consensus 217 ------------------~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~ 249 (829)
T KOG2280|consen 217 ------------------SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQ 249 (829)
T ss_pred ------------------ceEEEEEEcCCcceEEEEecCCcEEEEecchhh
No 479
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=24.34 E-value=4.5e+02 Score=22.45 Aligned_cols=123 Identities=10% Similarity=0.086 Sum_probs=59.6
Q ss_pred eeeeeecCCccce--EEEEEccCCCCCCCccEEEEeeCCC--eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC
Q 018675 12 REIQTLEGHTDRV--WSLAWKPTAGVDGVAPVFASCSGDK--TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK 87 (352)
Q Consensus 12 ~~~~~~~gH~~~V--~~i~~~p~~~~~~~~~~l~s~s~D~--~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 87 (352)
+.+.++. |...- -++.|..+ +.++-|.|.=| .|+.+++.+++........ .......+ +.- +++
T Consensus 34 ~vv~~yp-Hd~~aFTQGL~~~~~------g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~-~~~FgEGi---t~~-~d~ 101 (264)
T PF05096_consen 34 EVVETYP-HDPTAFTQGLEFLDD------GTLYESTGLYGQSSLRKVDLETGKVLQSVPLP-PRYFGEGI---TIL-GDK 101 (264)
T ss_dssp EEEEEEE---TT-EEEEEEEEET------TEEEEEECSTTEEEEEEEETTTSSEEEEEE-T-TT--EEEE---EEE-TTE
T ss_pred EEEEECC-CCCcccCccEEecCC------CEEEEeCCCCCcEEEEEEECCCCcEEEEEECC-ccccceeE---EEE-CCE
Confidence 4444443 44432 26777443 35677777655 6888898877532211100 00011112 222 233
Q ss_pred EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
+..---.++...+||..+- +.+..+. ..+.=+.++ .+++.|+.......+.++|...-.
T Consensus 102 l~qLTWk~~~~f~yd~~tl--~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~ 160 (264)
T PF05096_consen 102 LYQLTWKEGTGFVYDPNTL--KKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFK 160 (264)
T ss_dssp EEEEESSSSEEEEEETTTT--EEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-S
T ss_pred EEEEEecCCeEEEEccccc--eEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccc
Confidence 3334455677888887654 3344443 234445665 456667766666778888864433
No 480
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=24.02 E-value=1.4e+02 Score=16.53 Aligned_cols=22 Identities=9% Similarity=0.072 Sum_probs=18.4
Q ss_pred ccEEEEEEcCCCCEEEEEeCCC
Q 018675 215 STIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg 236 (352)
....+|++.++|...++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 3578899999999999998765
No 481
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=23.47 E-value=1.4e+02 Score=16.22 Aligned_cols=30 Identities=20% Similarity=0.063 Sum_probs=21.8
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
..++++|.|.++.++-+-..-+.|...++.
T Consensus 10 ~~~~la~d~~~~~lYw~D~~~~~I~~~~~~ 39 (43)
T smart00135 10 HPNGLAVDWIEGRLYWTDWGLDVIEVANLD 39 (43)
T ss_pred CcCEEEEeecCCEEEEEeCCCCEEEEEeCC
Confidence 356788988887777677666777776654
No 482
>KOG3611 consensus Semaphorins [Signal transduction mechanisms]
Probab=23.23 E-value=7.8e+02 Score=24.79 Aligned_cols=69 Identities=19% Similarity=0.257 Sum_probs=42.2
Q ss_pred CCeeEEEEC----CCCc--EEEEeeCCCcEEEEecCCCC-------eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC
Q 018675 119 NEVKSVSWN----ASGT--LLATCGRDKSVWIWEVMPGN-------EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN 185 (352)
Q Consensus 119 ~~v~~v~~~----~~~~--~l~s~~~d~~v~vwd~~~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 185 (352)
...+.|+.. .+++ .++.|.++|+|. .-+..+. -.+.+..+ .+..+|..+..++....|++|+..+
T Consensus 408 ~~~t~I~Vd~~~~~~~~ydVlflGTd~G~vl-KvV~~~~~~~~~~~llEElqvf-~~~~pI~~m~Ls~~~~~LyVgs~~g 485 (737)
T KOG3611|consen 408 YRLTQIVVDRVAGLDGNYDVLFLGTDAGTVL-KVVSPGKESGKSNVLLEELQVF-PDAEPIRSMQLSSKRGSLYVGSRSG 485 (737)
T ss_pred ceEEEEEEEEecCCCCcEEEEEEecCCCeEE-EEEecCCccCccceeEEEEeec-CCCCceeEEEecccCCeEEEEccCc
Confidence 344444443 3444 467788888764 2222222 12333333 3447899999999888899999888
Q ss_pred cEEE
Q 018675 186 TIKV 189 (352)
Q Consensus 186 ~i~i 189 (352)
.+++
T Consensus 486 V~qv 489 (737)
T KOG3611|consen 486 VVQV 489 (737)
T ss_pred EEEe
Confidence 7665
No 483
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=23.00 E-value=4.3e+02 Score=21.74 Aligned_cols=49 Identities=14% Similarity=0.184 Sum_probs=36.5
Q ss_pred CEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEe
Q 018675 87 KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136 (352)
Q Consensus 87 ~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~ 136 (352)
+.|..+.....|-+|+.......+...+.. -+.|..+.++..|++++|-
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEE
Confidence 455555666789999987555556666654 3789999999999999986
No 484
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=22.31 E-value=33 Score=16.85 Aligned_cols=7 Identities=57% Similarity=1.293 Sum_probs=5.0
Q ss_pred ECCCCCE
Q 018675 82 WSPSGKL 88 (352)
Q Consensus 82 ~s~~~~~ 88 (352)
|||+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 7787764
No 485
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=21.96 E-value=5.8e+02 Score=22.89 Aligned_cols=26 Identities=12% Similarity=0.238 Sum_probs=15.6
Q ss_pred CCCEEEEEeCCC-----------cEEEEEccCCceee
Q 018675 85 SGKLLATASFDA-----------TTCIWEDVGGDYEC 110 (352)
Q Consensus 85 ~~~~l~s~~~d~-----------~i~i~~~~~~~~~~ 110 (352)
++++.+.|+.+. .+..||..+..+..
T Consensus 84 ~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~~ 120 (376)
T PRK14131 84 DGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQK 120 (376)
T ss_pred CCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEEe
Confidence 567777777542 35566766655443
No 486
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.80 E-value=5.1e+02 Score=22.19 Aligned_cols=136 Identities=11% Similarity=0.095 Sum_probs=77.5
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN 119 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~ 119 (352)
.+++.||-.+.+.--|..+++..|.... ..++.+-+.- -|..++.|...+.+.+.+..++...-..+. .+
T Consensus 24 T~v~igSHs~~~~avd~~sG~~~We~il------g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~---~~ 93 (354)
T KOG4649|consen 24 TLVVIGSHSGIVIAVDPQSGNLIWEAIL------GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVI---LE 93 (354)
T ss_pred eEEEEecCCceEEEecCCCCcEEeehhh------CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeee---hh
Confidence 5677778888888888888876665322 1222221111 467789999999998888777643211111 12
Q ss_pred CeeEEE-ECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEE
Q 018675 120 EVKSVS-WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188 (352)
Q Consensus 120 ~v~~v~-~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 188 (352)
+|.+-+ -.+++.++..++.|++....|.+.. .++...+....-..+=...|-...|..+...|.+.
T Consensus 94 ~vk~~a~~d~~~glIycgshd~~~yalD~~~~---~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vl 160 (354)
T KOG4649|consen 94 TVKVRAQCDFDGGLIYCGSHDGNFYALDPKTY---GCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVL 160 (354)
T ss_pred hhccceEEcCCCceEEEecCCCcEEEeccccc---ceEEecccCCceeccceecCCCceEEEEeccceEE
Confidence 333222 2578889999999999998887533 34444332211111122334333455555555543
No 487
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=20.02 E-value=5.3e+02 Score=22.23 Aligned_cols=62 Identities=10% Similarity=0.121 Sum_probs=36.6
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
+..+|-|-+|.+... .+.+.|...........+...-...=-|+.+|.+++++..+|.+|..
T Consensus 224 ~~~aSLdhsi~Fh~~--~~~d~W~L~~~~s~~a~~gr~~~~g~i~~~~G~LvAs~~Qegl~r~~ 285 (286)
T PRK10526 224 MQIATIDHSMWFHRP--FNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNH 285 (286)
T ss_pred ceEEeeeEeEEEeCC--CCCCceEEEEEECCcccCCceEEEEEEECCCCCEEEEEEeeEEEEec
Confidence 445677887776642 23444543332222222222333444578999999999999988753
Done!