Query 018675
Match_columns 352
No_of_seqs 202 out of 2338
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 04:19:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018675.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018675hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-49 3.6E-54 353.1 44.7 326 11-351 5-336 (345)
2 2hes_X YDR267CP; beta-propelle 100.0 7E-46 2.4E-50 326.6 43.1 313 11-350 4-328 (330)
3 3frx_A Guanine nucleotide-bind 100.0 4.7E-45 1.6E-49 319.8 40.3 306 11-351 7-318 (319)
4 1got_B GT-beta; complex (GTP-b 100.0 1.9E-44 6.5E-49 318.7 43.9 293 10-347 44-340 (340)
5 1vyh_C Platelet-activating fac 100.0 1E-44 3.4E-49 328.6 41.0 289 14-349 101-410 (410)
6 3ow8_A WD repeat-containing pr 100.0 3.6E-44 1.2E-48 314.3 42.5 298 11-349 22-320 (321)
7 2pbi_B Guanine nucleotide-bind 100.0 1.2E-43 4.2E-48 315.2 42.4 295 9-347 52-354 (354)
8 4aow_A Guanine nucleotide-bind 100.0 1.2E-43 4.1E-48 312.6 40.4 309 11-351 28-338 (340)
9 2xzm_R RACK1; ribosome, transl 100.0 2.3E-43 7.9E-48 312.1 42.0 313 11-350 11-340 (343)
10 2ynn_A Coatomer subunit beta'; 100.0 2.7E-43 9.3E-48 306.5 40.6 295 11-350 3-302 (304)
11 3iz6_a 40S ribosomal protein R 100.0 1.6E-44 5.6E-49 324.0 30.5 310 11-350 56-375 (380)
12 4gqb_B Methylosome protein 50; 100.0 2.3E-42 7.8E-47 305.4 37.1 294 17-350 26-331 (344)
13 4ery_A WD repeat-containing pr 100.0 4.2E-41 1.4E-45 293.5 43.2 293 12-349 14-311 (312)
14 1nr0_A Actin interacting prote 100.0 2E-41 6.8E-46 322.1 41.9 305 14-350 140-567 (611)
15 4g56_B MGC81050 protein; prote 100.0 8.8E-42 3E-46 303.6 36.1 295 16-350 37-343 (357)
16 1nr0_A Actin interacting prote 100.0 2.8E-41 9.5E-46 321.1 41.3 304 12-349 181-610 (611)
17 3dm0_A Maltose-binding peripla 100.0 1.3E-41 4.3E-46 328.2 38.8 309 12-350 373-693 (694)
18 1erj_A Transcriptional repress 100.0 1.2E-40 4.1E-45 300.2 41.7 303 19-350 62-389 (393)
19 2ymu_A WD-40 repeat protein; u 100.0 7.8E-40 2.7E-44 308.9 41.8 283 12-347 294-577 (577)
20 2pm7_B Protein transport prote 100.0 2.7E-39 9.4E-44 280.3 35.6 263 14-349 2-284 (297)
21 1k8k_C P40, ARP2/3 complex 41 100.0 8.8E-39 3E-43 285.0 39.0 309 17-350 4-361 (372)
22 3k26_A Polycomb protein EED; W 100.0 2.2E-39 7.5E-44 288.0 33.2 327 8-350 4-366 (366)
23 3ei3_B DNA damage-binding prot 100.0 1.4E-38 4.9E-43 285.4 38.5 309 11-350 63-382 (383)
24 4e54_B DNA damage-binding prot 100.0 8.9E-40 3.1E-44 298.4 30.8 309 14-351 112-431 (435)
25 1gxr_A ESG1, transducin-like e 100.0 1.3E-37 4.4E-42 273.5 42.0 290 16-349 46-336 (337)
26 3dwl_C Actin-related protein 2 100.0 6.1E-40 2.1E-44 293.5 27.3 314 16-348 6-377 (377)
27 3bg1_A Protein SEC13 homolog; 100.0 1.3E-39 4.3E-44 284.9 27.5 260 16-349 8-292 (316)
28 2ymu_A WD-40 repeat protein; u 100.0 1.4E-37 4.7E-42 293.5 42.7 285 12-349 253-538 (577)
29 2ynn_A Coatomer subunit beta'; 100.0 3E-38 1E-42 274.6 35.0 246 71-350 10-259 (304)
30 3zwl_B Eukaryotic translation 100.0 4.1E-37 1.4E-41 273.5 42.9 294 12-350 23-346 (369)
31 3i2n_A WD repeat-containing pr 100.0 6.6E-38 2.3E-42 277.6 37.4 308 14-350 11-353 (357)
32 3odt_A Protein DOA1; ubiquitin 100.0 6.8E-37 2.3E-41 266.2 38.9 288 11-351 8-297 (313)
33 1sq9_A Antiviral protein SKI8; 100.0 3.4E-37 1.1E-41 277.4 37.5 305 11-351 6-396 (397)
34 2j04_B YDR362CP, TAU91; beta p 100.0 1.6E-38 5.5E-43 294.7 28.3 304 15-350 201-517 (524)
35 4gqb_B Methylosome protein 50; 100.0 2.8E-37 9.6E-42 272.8 34.5 246 20-298 81-331 (344)
36 3ow8_A WD repeat-containing pr 100.0 7.4E-37 2.5E-41 267.9 36.5 246 14-296 73-319 (321)
37 3gre_A Serine/threonine-protei 100.0 1E-37 3.6E-42 284.6 32.3 316 12-347 53-437 (437)
38 3vl1_A 26S proteasome regulato 100.0 8.3E-37 2.9E-41 277.0 37.0 298 18-351 95-420 (420)
39 1vyh_C Platelet-activating fac 100.0 9.4E-37 3.2E-41 276.2 34.3 244 71-350 105-369 (410)
40 2hes_X YDR267CP; beta-propelle 100.0 6E-36 2E-40 263.2 38.1 263 14-297 49-327 (330)
41 1r5m_A SIR4-interacting protei 100.0 4.9E-36 1.7E-40 271.5 38.6 300 18-349 42-424 (425)
42 2pm9_A Protein WEB1, protein t 100.0 1.2E-37 4E-42 282.0 27.5 299 20-350 11-337 (416)
43 3f3f_A Nucleoporin SEH1; struc 100.0 2.8E-36 9.4E-41 265.5 35.5 304 15-350 5-337 (351)
44 4gga_A P55CDC, cell division c 100.0 1.4E-35 4.7E-40 269.5 39.8 283 23-350 107-395 (420)
45 2pm9_A Protein WEB1, protein t 100.0 9.5E-37 3.2E-41 276.0 31.7 301 19-350 65-414 (416)
46 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-35 6E-40 261.8 38.9 266 17-298 57-335 (345)
47 4a11_B DNA excision repair pro 100.0 3.1E-35 1.1E-39 265.0 40.0 310 14-351 36-366 (408)
48 3jrp_A Fusion protein of prote 100.0 1.3E-35 4.6E-40 264.8 35.6 264 13-349 3-286 (379)
49 4aez_A CDC20, WD repeat-contai 100.0 2.3E-35 8E-40 266.3 37.6 288 15-350 85-380 (401)
50 4ggc_A P55CDC, cell division c 100.0 1E-34 3.5E-39 253.1 39.5 282 24-350 28-315 (318)
51 1got_B GT-beta; complex (GTP-b 100.0 4.5E-35 1.5E-39 258.7 37.5 251 13-295 89-340 (340)
52 4g56_B MGC81050 protein; prote 100.0 1.9E-36 6.6E-41 269.1 28.7 274 40-351 17-302 (357)
53 4h5i_A Guanine nucleotide-exch 100.0 1.1E-35 3.8E-40 265.0 31.8 292 22-350 15-343 (365)
54 3mkq_A Coatomer beta'-subunit; 100.0 4.6E-35 1.6E-39 287.1 38.5 296 11-350 3-302 (814)
55 3sfz_A APAF-1, apoptotic pepti 100.0 1E-34 3.6E-39 296.7 42.6 309 13-350 607-1034(1249)
56 3v7d_B Cell division control p 100.0 3.4E-34 1.2E-38 263.4 41.3 288 12-351 112-422 (464)
57 3frx_A Guanine nucleotide-bind 100.0 2.9E-34 1E-38 251.2 36.0 252 13-296 57-315 (319)
58 3vl1_A 26S proteasome regulato 100.0 1.3E-34 4.6E-39 262.5 34.2 284 23-350 58-365 (420)
59 1gxr_A ESG1, transducin-like e 100.0 2.7E-34 9.3E-39 252.2 34.1 286 20-351 8-297 (337)
60 1p22_A F-BOX/WD-repeat protein 100.0 9E-34 3.1E-38 258.6 38.3 291 12-350 124-414 (435)
61 1pgu_A Actin interacting prote 100.0 3.9E-34 1.3E-38 271.6 36.8 304 12-350 151-614 (615)
62 3dw8_B Serine/threonine-protei 100.0 3.1E-34 1.1E-38 262.0 33.8 300 19-348 26-444 (447)
63 2xzm_R RACK1; ribosome, transl 100.0 2E-33 6.9E-38 248.3 36.8 246 71-350 18-285 (343)
64 1yfq_A Cell cycle arrest prote 100.0 6.6E-34 2.3E-38 250.6 33.5 290 14-342 4-315 (342)
65 2oaj_A Protein SNI1; WD40 repe 100.0 3.4E-34 1.2E-38 282.5 34.6 322 16-348 146-659 (902)
66 4ery_A WD repeat-containing pr 100.0 2.1E-33 7.2E-38 244.8 35.8 247 71-351 20-269 (312)
67 2pbi_B Guanine nucleotide-bind 100.0 5.8E-33 2E-37 246.5 36.6 252 13-294 98-353 (354)
68 3sfz_A APAF-1, apoptotic pepti 100.0 1E-33 3.4E-38 289.5 35.9 303 12-350 648-1116(1249)
69 3mmy_A MRNA export factor; mRN 100.0 5.6E-33 1.9E-37 246.7 36.1 301 8-348 26-344 (368)
70 1erj_A Transcriptional repress 100.0 1E-32 3.4E-37 248.4 37.2 245 23-297 125-388 (393)
71 1pgu_A Actin interacting prote 100.0 5.5E-33 1.9E-37 263.6 37.0 255 12-297 54-327 (615)
72 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-33 5.2E-38 254.4 30.5 292 23-350 36-342 (402)
73 3jro_A Fusion protein of prote 100.0 1.3E-33 4.5E-38 274.2 31.6 264 14-350 2-285 (753)
74 3v7d_B Cell division control p 100.0 3.8E-32 1.3E-36 249.7 39.3 286 12-349 153-462 (464)
75 2oaj_A Protein SNI1; WD40 repe 100.0 1E-32 3.4E-37 272.0 37.8 213 9-245 6-242 (902)
76 2xyi_A Probable histone-bindin 100.0 3.8E-33 1.3E-37 254.2 31.4 274 15-350 122-410 (430)
77 3iz6_a 40S ribosomal protein R 100.0 7.1E-34 2.4E-38 254.8 26.1 263 12-297 99-374 (380)
78 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.7E-32 3E-36 246.2 40.4 286 12-350 150-442 (445)
79 2j04_A TAU60, YPL007P, hypothe 100.0 9.4E-34 3.2E-38 258.0 26.7 275 19-349 13-296 (588)
80 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-31 6.7E-36 243.8 40.4 282 13-351 110-392 (445)
81 3dwl_C Actin-related protein 2 100.0 5.5E-34 1.9E-38 254.8 22.9 263 73-349 10-280 (377)
82 2pm7_B Protein transport prote 100.0 9.6E-33 3.3E-37 239.1 29.9 221 13-244 45-284 (297)
83 2j04_B YDR362CP, TAU91; beta p 100.0 9.2E-34 3.1E-38 262.8 23.5 212 20-244 132-385 (524)
84 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-31 6.6E-36 261.4 41.2 301 12-349 46-385 (814)
85 1k8k_C P40, ARP2/3 complex 41 100.0 1E-31 3.4E-36 239.3 34.7 261 72-350 6-274 (372)
86 3bg1_A Protein SEC13 homolog; 100.0 1.2E-32 4.2E-37 240.6 24.2 220 13-244 49-292 (316)
87 4h5i_A Guanine nucleotide-exch 100.0 3.1E-31 1E-35 236.3 32.4 262 16-298 68-343 (365)
88 4aow_A Guanine nucleotide-bind 100.0 3.1E-30 1.1E-34 226.8 37.8 272 43-350 8-286 (340)
89 3dm0_A Maltose-binding peripla 100.0 6.7E-31 2.3E-35 253.4 35.7 247 71-350 379-632 (694)
90 4e54_B DNA damage-binding prot 100.0 9.8E-32 3.3E-36 245.2 27.3 259 72-350 117-387 (435)
91 3odt_A Protein DOA1; ubiquitin 100.0 8.9E-31 3.1E-35 227.5 31.9 241 71-351 15-256 (313)
92 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.4E-30 8.1E-35 237.0 36.0 303 22-350 5-391 (450)
93 1r5m_A SIR4-interacting protei 100.0 3.8E-30 1.3E-34 232.8 35.4 270 50-350 26-361 (425)
94 3ei3_B DNA damage-binding prot 100.0 1.3E-30 4.6E-35 233.5 31.6 255 71-350 70-339 (383)
95 3dw8_B Serine/threonine-protei 100.0 6.8E-31 2.3E-35 239.9 29.4 257 73-351 27-374 (447)
96 3i2n_A WD repeat-containing pr 100.0 9.4E-31 3.2E-35 231.6 29.1 256 71-350 15-291 (357)
97 3gre_A Serine/threonine-protei 100.0 8E-32 2.7E-36 245.7 22.5 304 15-350 11-359 (437)
98 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-32 8.6E-37 248.6 18.5 251 19-339 83-350 (588)
99 1yfq_A Cell cycle arrest prote 100.0 2.4E-30 8.3E-35 227.8 30.8 258 71-350 8-282 (342)
100 3k26_A Polycomb protein EED; W 100.0 5.7E-30 2E-34 227.2 32.3 272 68-350 12-318 (366)
101 3jrp_A Fusion protein of prote 100.0 2.8E-30 9.7E-35 230.2 29.7 222 12-244 46-286 (379)
102 3vu4_A KMHSV2; beta-propeller 100.0 2.6E-29 8.9E-34 223.0 35.4 299 12-350 10-336 (355)
103 1sq9_A Antiviral protein SKI8; 100.0 5.7E-30 2E-34 230.2 31.4 263 13-297 54-394 (397)
104 4aez_A CDC20, WD repeat-contai 100.0 8.4E-29 2.9E-33 223.4 35.1 243 19-298 132-380 (401)
105 3zwl_B Eukaryotic translation 100.0 2.2E-28 7.6E-33 217.0 36.8 251 12-298 65-346 (369)
106 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-29 6.6E-34 227.6 29.8 257 14-298 74-342 (402)
107 4gq1_A NUP37; propeller, trans 100.0 2.1E-30 7.3E-35 233.2 23.3 253 39-348 101-387 (393)
108 3lrv_A PRE-mRNA-splicing facto 100.0 5E-29 1.7E-33 220.1 30.4 264 39-347 48-330 (343)
109 4gga_A P55CDC, cell division c 100.0 2.1E-28 7.2E-33 222.1 35.2 248 14-297 140-394 (420)
110 3jro_A Fusion protein of prote 100.0 8.1E-30 2.8E-34 247.6 26.3 223 12-245 44-285 (753)
111 4a11_B DNA excision repair pro 100.0 2.4E-28 8.2E-33 219.9 31.7 289 18-349 96-404 (408)
112 3bws_A Protein LP49; two-domai 100.0 3.5E-27 1.2E-31 214.6 36.5 293 12-350 114-432 (433)
113 3f3f_A Nucleoporin SEH1; struc 100.0 3.9E-28 1.4E-32 213.3 28.4 228 12-245 48-337 (351)
114 3mmy_A MRNA export factor; mRN 100.0 1.2E-27 4.2E-32 212.1 30.6 247 71-350 36-304 (368)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.4E-27 1.8E-31 214.7 34.2 255 16-297 97-390 (450)
116 1p22_A F-BOX/WD-repeat protein 100.0 7.5E-27 2.6E-31 212.8 33.3 250 12-298 164-414 (435)
117 4ggc_A P55CDC, cell division c 100.0 1.1E-26 3.7E-31 202.2 32.8 245 16-296 62-313 (318)
118 1l0q_A Surface layer protein; 100.0 5E-26 1.7E-30 204.1 37.8 265 40-350 3-275 (391)
119 2xyi_A Probable histone-bindin 100.0 1.4E-27 4.6E-32 217.5 27.9 227 11-245 171-410 (430)
120 2w18_A PALB2, fancn, partner a 100.0 1.6E-25 5.5E-30 192.1 35.3 304 11-349 25-356 (356)
121 3lrv_A PRE-mRNA-splicing facto 100.0 3.6E-27 1.2E-31 208.2 22.9 237 81-350 43-292 (343)
122 4gq1_A NUP37; propeller, trans 100.0 1.2E-26 4E-31 208.7 21.8 210 14-241 129-385 (393)
123 2w18_A PALB2, fancn, partner a 99.9 1.1E-25 3.9E-30 193.1 24.9 179 48-243 156-355 (356)
124 3vu4_A KMHSV2; beta-propeller 99.9 2.7E-24 9.2E-29 190.7 30.6 244 71-350 16-271 (355)
125 1l0q_A Surface layer protein; 99.9 8.5E-23 2.9E-27 183.1 40.1 244 12-298 23-275 (391)
126 3bws_A Protein LP49; two-domai 99.9 1.1E-23 3.8E-28 191.4 31.0 240 75-350 123-390 (433)
127 1ri6_A Putative isomerase YBHE 99.9 1.6E-22 5.5E-27 177.6 36.4 289 41-349 7-307 (343)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.7E-23 3.3E-27 184.4 30.4 269 15-330 111-409 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.7E-23 1.6E-27 186.5 27.4 281 20-350 61-387 (415)
130 1nir_A Nitrite reductase; hemo 99.9 4.8E-21 1.7E-25 178.7 36.2 306 12-350 170-514 (543)
131 3u4y_A Uncharacterized protein 99.9 9.9E-21 3.4E-25 165.7 33.5 284 39-351 10-305 (331)
132 3hfq_A Uncharacterized protein 99.9 1.7E-20 5.8E-25 165.4 34.9 283 46-349 13-316 (347)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 2.5E-21 8.6E-26 175.9 29.8 210 20-245 35-278 (434)
134 2ecf_A Dipeptidyl peptidase IV 99.9 1.7E-21 5.7E-26 189.1 30.3 287 21-349 36-412 (741)
135 2ojh_A Uncharacterized protein 99.9 3.1E-21 1.1E-25 165.4 25.5 259 44-340 17-293 (297)
136 1nir_A Nitrite reductase; hemo 99.9 1.2E-20 4.2E-25 176.0 31.2 280 39-350 149-458 (543)
137 1xfd_A DIP, dipeptidyl aminope 99.9 6.2E-21 2.1E-25 184.6 24.7 291 23-349 18-392 (723)
138 1ri6_A Putative isomerase YBHE 99.9 1.3E-18 4.4E-23 152.5 36.2 258 19-297 35-307 (343)
139 2oit_A Nucleoporin 214KDA; NH2 99.9 2.4E-20 8.1E-25 169.5 25.5 207 75-298 37-278 (434)
140 2z3z_A Dipeptidyl aminopeptida 99.9 1.2E-19 4.2E-24 175.1 29.9 284 22-350 82-435 (706)
141 3scy_A Hypothetical bacterial 99.9 5.7E-18 1.9E-22 150.1 34.5 281 46-349 24-336 (361)
142 3vgz_A Uncharacterized protein 99.9 8.4E-18 2.9E-22 148.1 35.1 274 20-339 39-334 (353)
143 2ojh_A Uncharacterized protein 99.9 2.7E-19 9.1E-24 153.3 23.8 239 16-287 36-291 (297)
144 2ecf_A Dipeptidyl peptidase IV 99.8 8.8E-19 3E-23 170.0 29.5 283 23-348 110-457 (741)
145 1k32_A Tricorn protease; prote 99.8 3.4E-19 1.2E-23 179.1 26.7 279 15-348 197-500 (1045)
146 1k32_A Tricorn protease; prote 99.8 2.9E-18 1E-22 172.3 32.6 286 20-351 294-638 (1045)
147 2z3z_A Dipeptidyl aminopeptida 99.8 4.1E-18 1.4E-22 164.4 30.6 275 40-348 36-389 (706)
148 3hfq_A Uncharacterized protein 99.8 7.2E-17 2.5E-21 142.1 33.6 259 19-296 37-315 (347)
149 1pby_B Quinohemoprotein amine 99.8 1.5E-17 5.1E-22 145.4 29.0 267 40-350 2-310 (337)
150 1xfd_A DIP, dipeptidyl aminope 99.8 4.2E-18 1.4E-22 164.7 26.9 290 15-341 51-432 (723)
151 3o4h_A Acylamino-acid-releasin 99.8 7.1E-18 2.4E-22 159.2 26.2 268 20-348 20-313 (582)
152 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.4E-17 1.9E-21 144.1 29.6 211 20-243 38-289 (365)
153 1jmx_B Amine dehydrogenase; ox 99.8 3.4E-17 1.2E-21 143.9 27.9 263 39-350 11-325 (349)
154 3scy_A Hypothetical bacterial 99.8 1.4E-15 4.6E-20 134.8 35.7 255 20-296 48-335 (361)
155 1z68_A Fibroblast activation p 99.8 1E-17 3.5E-22 162.0 21.2 291 26-350 20-391 (719)
156 3u4y_A Uncharacterized protein 99.8 2.2E-15 7.5E-20 131.5 33.5 254 15-298 34-304 (331)
157 3pe7_A Oligogalacturonate lyas 99.8 5.4E-16 1.8E-20 138.5 28.7 293 13-350 22-382 (388)
158 3vgz_A Uncharacterized protein 99.8 1.1E-15 3.7E-20 134.6 29.9 240 74-350 40-303 (353)
159 3o4h_A Acylamino-acid-releasin 99.8 2.4E-17 8.2E-22 155.6 19.0 233 72-348 19-274 (582)
160 1z68_A Fibroblast activation p 99.8 6.3E-17 2.2E-21 156.4 21.8 293 23-349 61-442 (719)
161 1pby_B Quinohemoprotein amine 99.7 4.5E-15 1.5E-19 129.5 26.6 239 23-298 35-310 (337)
162 4a5s_A Dipeptidyl peptidase 4 99.7 3.6E-15 1.2E-19 144.6 23.1 283 21-349 16-352 (740)
163 1jof_A Carboxy-CIS,CIS-muconat 99.7 8.9E-14 3.1E-18 123.3 29.5 164 75-244 40-223 (365)
164 3azo_A Aminopeptidase; POP fam 99.7 1.1E-14 3.8E-19 139.4 24.9 297 16-348 18-365 (662)
165 1q7f_A NHL, brain tumor CG1071 99.7 7.3E-13 2.5E-17 113.1 32.7 246 18-297 26-279 (286)
166 1q7f_A NHL, brain tumor CG1071 99.7 5.1E-13 1.8E-17 114.1 30.6 240 74-350 29-280 (286)
167 3fvz_A Peptidyl-glycine alpha- 99.7 5.1E-13 1.7E-17 116.7 30.3 248 75-350 24-322 (329)
168 3c5m_A Oligogalacturonate lyas 99.6 1.8E-14 6.2E-19 128.7 20.9 276 24-349 38-381 (396)
169 1jmx_B Amine dehydrogenase; ox 99.6 5.1E-14 1.7E-18 123.5 22.0 194 23-244 44-324 (349)
170 4a5s_A Dipeptidyl peptidase 4 99.6 1.2E-13 4.3E-18 133.8 26.4 215 15-244 50-352 (740)
171 2dg1_A DRP35, lactonase; beta 99.6 5.7E-12 1.9E-16 110.0 34.5 214 13-243 36-261 (333)
172 2gop_A Trilobed protease; beta 99.6 2.9E-12 9.8E-17 112.5 31.4 239 48-348 42-329 (347)
173 3azo_A Aminopeptidase; POP fam 99.6 2.5E-13 8.6E-18 130.0 26.4 160 73-243 128-321 (662)
174 2xdw_A Prolyl endopeptidase; a 99.6 3.7E-12 1.2E-16 123.0 30.2 201 19-241 122-362 (710)
175 3fvz_A Peptidyl-glycine alpha- 99.6 6.6E-12 2.2E-16 109.6 28.6 248 20-297 22-321 (329)
176 2bkl_A Prolyl endopeptidase; m 99.5 1.6E-12 5.4E-17 125.2 24.4 203 19-243 118-347 (695)
177 2z2n_A Virginiamycin B lyase; 99.5 9.7E-10 3.3E-14 93.9 38.9 286 16-350 9-295 (299)
178 3e5z_A Putative gluconolactona 99.5 9E-12 3.1E-16 106.9 26.1 232 75-343 28-280 (296)
179 3pe7_A Oligogalacturonate lyas 99.5 3.6E-12 1.2E-16 113.6 23.8 237 80-350 41-329 (388)
180 2oiz_A Aromatic amine dehydrog 99.5 1.2E-10 4E-15 103.0 30.8 272 47-351 29-335 (361)
181 3e5z_A Putative gluconolactona 99.5 1.9E-10 6.4E-15 98.6 29.6 239 15-293 21-282 (296)
182 2oiz_A Aromatic amine dehydrog 99.5 1E-10 3.6E-15 103.4 28.3 280 14-331 44-360 (361)
183 1rwi_B Serine/threonine-protei 99.5 1E-10 3.5E-15 98.7 26.7 238 76-350 25-264 (270)
184 2dg1_A DRP35, lactonase; beta 99.4 4.8E-11 1.6E-15 104.1 23.4 244 75-349 6-262 (333)
185 2gop_A Trilobed protease; beta 99.4 2.8E-10 9.7E-15 99.7 27.9 222 22-296 59-329 (347)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.3E-09 4.6E-14 93.9 30.4 210 17-243 13-254 (314)
187 1qks_A Cytochrome CD1 nitrite 99.4 3.1E-09 1.1E-13 99.1 34.1 286 39-350 167-477 (567)
188 1yr2_A Prolyl oligopeptidase; 99.4 4.1E-10 1.4E-14 109.2 29.1 248 73-350 161-441 (741)
189 2qc5_A Streptogramin B lactona 99.4 4.2E-08 1.4E-12 83.6 38.6 283 18-349 16-299 (300)
190 1xip_A Nucleoporin NUP159; bet 99.4 5.9E-12 2E-16 111.1 14.5 183 23-232 39-231 (388)
191 1rwi_B Serine/threonine-protei 99.4 6.9E-10 2.4E-14 93.5 26.8 235 23-296 25-262 (270)
192 3c5m_A Oligogalacturonate lyas 99.4 2.3E-11 7.7E-16 108.5 17.9 235 75-350 36-329 (396)
193 3g4e_A Regucalcin; six bladed 99.3 7.5E-09 2.6E-13 88.7 30.9 207 19-244 10-228 (297)
194 3dsm_A Uncharacterized protein 99.3 3.5E-09 1.2E-13 92.2 28.6 264 47-349 15-301 (328)
195 2z2n_A Virginiamycin B lyase; 99.3 3.9E-08 1.3E-12 83.7 34.3 238 75-348 15-253 (299)
196 1qks_A Cytochrome CD1 nitrite 99.3 6.7E-08 2.3E-12 90.1 38.0 301 23-350 198-538 (567)
197 3no2_A Uncharacterized protein 99.3 1.3E-08 4.5E-13 86.2 29.2 221 85-337 4-230 (276)
198 1yr2_A Prolyl oligopeptidase; 99.3 3.5E-09 1.2E-13 102.6 27.3 246 19-297 160-440 (741)
199 3no2_A Uncharacterized protein 99.2 2.2E-09 7.5E-14 91.1 22.1 184 39-244 5-194 (276)
200 2bkl_A Prolyl endopeptidase; m 99.2 1.4E-09 4.8E-14 104.6 22.6 247 72-350 118-397 (695)
201 3hrp_A Uncharacterized protein 99.2 3.5E-08 1.2E-12 88.6 30.3 257 76-349 132-409 (409)
202 2xdw_A Prolyl endopeptidase; a 99.2 1.3E-08 4.3E-13 98.2 27.8 242 84-348 81-364 (710)
203 2ghs_A AGR_C_1268P; regucalcin 99.2 5.5E-08 1.9E-12 84.5 29.2 199 23-243 50-258 (326)
204 2qc5_A Streptogramin B lactona 99.2 3.4E-07 1.2E-11 77.9 33.2 238 75-348 20-258 (300)
205 1xip_A Nucleoporin NUP159; bet 99.2 7.4E-10 2.5E-14 97.8 15.6 180 120-334 39-229 (388)
206 3dsm_A Uncharacterized protein 99.1 9.3E-08 3.2E-12 83.2 27.5 235 23-297 45-301 (328)
207 3hrp_A Uncharacterized protein 99.1 4.9E-07 1.7E-11 81.1 32.7 203 21-244 130-353 (409)
208 3iuj_A Prolyl endopeptidase; h 99.1 2.7E-08 9.4E-13 95.6 25.6 202 18-244 125-358 (693)
209 3dr2_A Exported gluconolactona 99.1 5.1E-08 1.8E-12 83.8 23.9 230 76-344 46-301 (305)
210 2mad_H Methylamine dehydrogena 99.1 2E-06 6.9E-11 76.0 32.9 265 50-350 48-350 (373)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 2.3E-07 7.9E-12 79.7 26.1 204 20-244 69-298 (314)
212 2qe8_A Uncharacterized protein 99.0 3.3E-08 1.1E-12 86.6 20.0 274 22-340 17-311 (343)
213 3sjl_D Methylamine dehydrogena 99.0 9.1E-07 3.1E-11 77.8 27.7 264 48-350 58-363 (386)
214 3dr2_A Exported gluconolactona 98.9 1.3E-06 4.3E-11 75.0 26.4 203 16-244 39-266 (305)
215 3g4e_A Regucalcin; six bladed 98.8 1.1E-05 3.8E-10 68.8 26.9 192 21-233 53-260 (297)
216 3c75_H MADH, methylamine dehyd 98.8 1.9E-06 6.6E-11 77.0 22.4 279 41-350 87-402 (426)
217 2mad_H Methylamine dehydrogena 98.7 0.00015 5.1E-09 64.0 31.6 243 26-298 70-350 (373)
218 2ghs_A AGR_C_1268P; regucalcin 98.6 6.3E-05 2.2E-09 65.1 26.2 190 21-233 89-290 (326)
219 3iuj_A Prolyl endopeptidase; h 98.6 7E-06 2.4E-10 78.8 20.7 204 116-349 126-358 (693)
220 2hz6_A Endoplasmic reticulum t 98.5 3.9E-08 1.3E-12 87.0 4.0 178 39-244 9-191 (369)
221 2qe8_A Uncharacterized protein 98.5 5.7E-05 2E-09 65.8 22.0 205 19-241 64-317 (343)
222 1mda_H Methylamine dehydrogena 98.4 2.3E-05 7.9E-10 68.8 19.3 274 40-350 33-346 (368)
223 2ece_A 462AA long hypothetical 98.4 4.1E-05 1.4E-09 68.1 20.0 197 39-244 96-351 (462)
224 3sjl_D Methylamine dehydrogena 98.4 0.00023 7.7E-09 62.6 23.3 246 80-350 38-320 (386)
225 2ece_A 462AA long hypothetical 98.3 0.00025 8.7E-09 63.1 22.7 186 41-233 150-399 (462)
226 2xbg_A YCF48-like protein; pho 98.3 0.0012 4.3E-08 56.9 31.5 285 21-347 35-319 (327)
227 1yiq_A Quinohemoprotein alcoho 98.3 0.00038 1.3E-08 66.6 25.5 150 40-195 122-339 (689)
228 3c75_H MADH, methylamine dehyd 98.3 0.00017 5.7E-09 64.5 20.5 201 26-245 122-402 (426)
229 1kb0_A Quinohemoprotein alcoho 98.2 0.0014 4.6E-08 62.7 26.0 153 39-195 128-347 (677)
230 3hxj_A Pyrrolo-quinoline quino 98.2 0.00046 1.6E-08 59.2 20.9 217 86-349 107-323 (330)
231 1fwx_A Nitrous oxide reductase 98.1 0.0013 4.4E-08 60.7 24.2 241 85-339 100-408 (595)
232 2iwa_A Glutamine cyclotransfer 98.1 0.0019 6.4E-08 53.7 22.6 203 121-349 23-236 (266)
233 2fp8_A Strictosidine synthase; 98.1 0.0042 1.4E-07 53.3 28.2 208 17-243 14-267 (322)
234 2fp8_A Strictosidine synthase; 98.0 0.0034 1.1E-07 53.9 23.9 242 77-350 21-313 (322)
235 2iwa_A Glutamine cyclotransfer 98.0 0.0034 1.2E-07 52.1 22.0 211 11-244 9-236 (266)
236 1yiq_A Quinohemoprotein alcoho 98.0 0.00061 2.1E-08 65.2 19.9 204 39-247 70-340 (689)
237 3nol_A Glutamine cyclotransfer 98.0 0.0032 1.1E-07 51.9 21.1 195 116-338 38-244 (262)
238 2hz6_A Endoplasmic reticulum t 97.9 5.2E-06 1.8E-10 73.3 3.8 141 85-245 8-149 (369)
239 1npe_A Nidogen, entactin; glyc 97.9 0.0065 2.2E-07 50.4 30.8 228 41-297 3-237 (267)
240 3nok_A Glutaminyl cyclase; bet 97.9 0.0032 1.1E-07 51.9 19.1 190 121-338 57-254 (268)
241 3hxj_A Pyrrolo-quinoline quino 97.9 0.0039 1.3E-07 53.3 21.0 213 41-295 109-321 (330)
242 1mda_H Methylamine dehydrogena 97.9 0.0019 6.4E-08 56.6 18.8 67 169-245 269-346 (368)
243 2xe4_A Oligopeptidase B; hydro 97.8 0.0017 5.7E-08 62.9 20.1 202 19-241 170-394 (751)
244 3nol_A Glutamine cyclotransfer 97.8 0.0097 3.3E-07 49.0 25.1 197 12-233 32-243 (262)
245 3mbr_X Glutamine cyclotransfer 97.8 0.0093 3.2E-07 48.6 21.7 197 116-339 16-224 (243)
246 3nok_A Glutaminyl cyclase; bet 97.8 0.01 3.5E-07 48.9 23.8 192 13-232 45-253 (268)
247 1k3i_A Galactose oxidase precu 97.8 0.0092 3.1E-07 56.7 24.2 108 39-149 198-323 (656)
248 1kb0_A Quinohemoprotein alcoho 97.8 0.0018 6.2E-08 61.8 19.0 105 48-152 189-349 (677)
249 2xe4_A Oligopeptidase B; hydro 97.8 0.0041 1.4E-07 60.2 21.3 203 76-296 175-396 (751)
250 3mbr_X Glutamine cyclotransfer 97.7 0.014 4.8E-07 47.5 22.7 196 12-233 10-222 (243)
251 3v9f_A Two-component system se 97.7 0.049 1.7E-06 52.9 30.3 283 22-344 363-651 (781)
252 3qqz_A Putative uncharacterize 97.6 0.019 6.3E-07 47.4 28.1 212 15-241 20-249 (255)
253 3tc9_A Hypothetical hydrolase; 97.6 0.037 1.3E-06 49.6 24.2 154 77-244 139-300 (430)
254 1k3i_A Galactose oxidase precu 97.6 0.0071 2.4E-07 57.5 19.8 113 79-193 190-322 (656)
255 2xbg_A YCF48-like protein; pho 97.6 0.031 1E-06 48.1 26.4 236 75-343 36-272 (327)
256 4a2l_A BT_4663, two-component 97.5 0.075 2.5E-06 51.7 34.9 292 24-349 175-479 (795)
257 1fwx_A Nitrous oxide reductase 97.5 0.04 1.4E-06 50.9 23.0 190 40-245 103-361 (595)
258 2p4o_A Hypothetical protein; p 97.5 0.034 1.2E-06 47.2 26.5 237 76-339 33-278 (306)
259 3qqz_A Putative uncharacterize 97.5 0.035 1.2E-06 45.8 25.4 168 75-244 27-203 (255)
260 4a2l_A BT_4663, two-component 97.4 0.1 3.6E-06 50.6 34.4 293 22-348 263-569 (795)
261 2p4o_A Hypothetical protein; p 97.4 0.052 1.8E-06 46.0 26.0 208 12-244 23-241 (306)
262 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.084 2.9E-06 46.0 30.6 256 40-347 104-375 (376)
263 1kv9_A Type II quinohemoprotei 97.2 0.1 3.6E-06 49.6 23.1 196 40-246 67-334 (668)
264 2p9w_A MAL S 1 allergenic prot 97.1 0.055 1.9E-06 46.1 17.8 159 26-193 17-214 (334)
265 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.17 5.7E-06 44.0 31.8 271 40-350 54-337 (376)
266 2p9w_A MAL S 1 allergenic prot 96.9 0.15 5.1E-06 43.5 18.4 161 78-244 16-214 (334)
267 3pbp_A Nucleoporin NUP82; beta 96.8 0.27 9.1E-06 43.4 20.2 118 120-240 67-207 (452)
268 1npe_A Nidogen, entactin; glyc 96.7 0.19 6.7E-06 41.3 27.6 196 23-244 37-237 (267)
269 4hw6_A Hypothetical protein, I 96.4 0.49 1.7E-05 42.3 29.9 206 23-243 140-372 (433)
270 3v9f_A Two-component system se 96.1 1.1 3.6E-05 43.4 34.7 247 75-349 211-477 (781)
271 3tc9_A Hypothetical hydrolase; 96.1 0.72 2.5E-05 41.1 28.6 156 23-193 138-300 (430)
272 3pbp_A Nucleoporin NUP82; beta 96.0 0.73 2.5E-05 40.7 20.5 125 165-294 67-208 (452)
273 3kya_A Putative phosphatase; s 95.7 1.2 4.1E-05 40.4 18.7 162 77-244 141-340 (496)
274 4hw6_A Hypothetical protein, I 95.4 1.4 4.7E-05 39.4 28.3 256 77-349 141-432 (433)
275 1kv9_A Type II quinohemoprotei 95.2 2.1 7.3E-05 40.6 29.1 146 40-194 118-333 (668)
276 2ism_A Putative oxidoreductase 95.2 1.4 4.6E-05 38.1 27.0 104 76-182 32-153 (352)
277 1tl2_A L10, protein (tachylect 95.2 0.96 3.3E-05 36.1 14.8 153 76-241 42-204 (236)
278 1cru_A Protein (soluble quinop 95.1 1.8 6.2E-05 38.9 19.2 108 76-183 28-163 (454)
279 3v64_C Agrin; beta propeller, 95.0 1.6 5.3E-05 37.6 24.1 195 23-242 74-272 (349)
280 3v64_C Agrin; beta propeller, 95.0 1.6 5.4E-05 37.6 29.4 197 20-244 32-233 (349)
281 3p5b_L Low density lipoprotein 94.8 2 6.7E-05 37.9 28.0 186 40-244 84-276 (400)
282 3v65_B Low-density lipoprotein 94.7 2 6.7E-05 37.6 22.0 196 22-242 116-315 (386)
283 3sre_A PON1, serum paraoxonase 94.6 2.1 7.1E-05 37.0 17.1 133 48-184 138-287 (355)
284 2ad6_A Methanol dehydrogenase 94.5 3 0.0001 38.7 21.1 104 48-152 175-338 (571)
285 1n7d_A LDL receptor, low-densi 94.3 0.6 2E-05 44.6 13.0 180 47-244 384-570 (699)
286 2g8s_A Glucose/sorbosone dehyd 94.0 2.1 7E-05 37.0 14.8 105 76-182 19-148 (353)
287 3v65_B Low-density lipoprotein 93.5 3.6 0.00012 35.9 28.3 217 47-295 94-315 (386)
288 3amr_A 3-phytase; beta-propell 93.4 3.4 0.00012 35.5 24.6 195 39-244 40-262 (355)
289 1n7d_A LDL receptor, low-densi 93.4 0.97 3.3E-05 43.1 12.6 202 23-243 407-612 (699)
290 2ism_A Putative oxidoreductase 93.1 3.8 0.00013 35.2 15.7 106 21-137 30-153 (352)
291 3sre_A PON1, serum paraoxonase 92.9 4.2 0.00014 35.1 20.0 156 78-244 53-251 (355)
292 3das_A Putative oxidoreductase 92.8 4.3 0.00015 34.9 28.4 107 76-182 33-158 (347)
293 3p5b_L Low density lipoprotein 92.7 4.8 0.00016 35.3 26.6 204 20-242 110-317 (400)
294 2vpj_A Kelch-like protein 12; 92.6 3.9 0.00013 33.9 21.8 146 85-244 62-230 (301)
295 2xn4_A Kelch-like protein 2; s 92.5 4 0.00014 33.9 17.2 146 85-244 108-275 (302)
296 3m0c_C LDL receptor, low-densi 92.2 8.9 0.0003 37.1 29.8 180 47-244 402-588 (791)
297 1w6s_A Methanol dehydrogenase 92.1 7.7 0.00026 36.2 18.7 111 40-152 63-194 (599)
298 1cru_A Protein (soluble quinop 92.0 5.3 0.00018 35.8 14.9 113 119-234 27-163 (454)
299 2ad6_A Methanol dehydrogenase 91.8 8 0.00027 35.8 28.5 66 40-108 116-188 (571)
300 1tl2_A L10, protein (tachylect 91.4 4.6 0.00016 32.2 17.1 117 164-294 41-159 (236)
301 3ii7_A Kelch-like protein 7; p 91.3 5.7 0.00019 33.0 19.2 186 40-244 57-271 (306)
302 3das_A Putative oxidoreductase 91.2 6.6 0.00023 33.7 16.6 112 118-233 31-158 (347)
303 3ii7_A Kelch-like protein 7; p 90.9 6.1 0.00021 32.8 20.5 185 41-244 14-224 (306)
304 2xn4_A Kelch-like protein 2; s 90.9 6.1 0.00021 32.7 21.1 146 85-244 61-228 (302)
305 1zgk_A Kelch-like ECH-associat 90.7 6.5 0.00022 32.8 17.5 146 85-244 70-239 (308)
306 1ijq_A LDL receptor, low-densi 90.7 6.9 0.00023 32.9 29.8 178 48-244 9-194 (316)
307 3a9g_A Putative uncharacterize 90.6 7.7 0.00026 33.4 17.2 108 21-137 28-153 (354)
308 3m0c_C LDL receptor, low-densi 90.4 13 0.00046 35.9 25.8 203 21-242 423-629 (791)
309 3sov_A LRP-6, low-density lipo 90.3 7.5 0.00026 32.8 27.1 221 47-296 11-236 (318)
310 3sov_A LRP-6, low-density lipo 90.2 7.6 0.00026 32.8 22.4 197 23-243 36-236 (318)
311 2vpj_A Kelch-like protein 12; 90.1 7.1 0.00024 32.3 20.2 145 85-243 112-276 (301)
312 3ei3_A DNA damage-binding prot 89.9 18 0.00062 36.7 28.0 152 78-243 835-997 (1158)
313 2uvk_A YJHT; unknown function, 89.8 8.7 0.0003 32.7 14.9 51 96-147 168-224 (357)
314 1flg_A Protein (quinoprotein e 89.7 13 0.00044 34.5 21.4 56 96-152 291-358 (582)
315 1zgk_A Kelch-like ECH-associat 88.9 9.2 0.00031 31.8 17.4 145 85-243 121-285 (308)
316 3amr_A 3-phytase; beta-propell 88.7 11 0.00037 32.4 22.8 143 86-238 40-203 (355)
317 4asc_A Kelch repeat and BTB do 87.8 11 0.00038 31.4 20.3 183 42-244 8-220 (315)
318 1ijq_A LDL receptor, low-densi 87.6 12 0.0004 31.5 29.4 219 95-348 9-236 (316)
319 3kya_A Putative phosphatase; s 87.1 17 0.00058 32.9 28.0 161 24-192 141-339 (496)
320 1w6s_A Methanol dehydrogenase 85.1 24 0.00083 32.8 31.1 64 42-108 124-194 (599)
321 3s94_A LRP-6, low-density lipo 84.7 26 0.00088 32.8 21.0 199 21-243 39-241 (619)
322 3a9g_A Putative uncharacterize 84.6 18 0.00063 30.9 28.4 104 76-182 30-153 (354)
323 2uvk_A YJHT; unknown function, 83.2 20 0.00069 30.4 17.5 96 40-139 21-128 (357)
324 2wg3_C Hedgehog-interacting pr 81.8 29 0.00098 31.1 14.7 115 119-235 14-159 (463)
325 3ei3_A DNA damage-binding prot 81.4 49 0.0017 33.6 35.5 194 21-233 553-755 (1158)
326 2g8s_A Glucose/sorbosone dehyd 76.9 34 0.0012 29.2 14.9 109 22-138 18-149 (353)
327 2woz_A Kelch repeat and BTB do 74.7 35 0.0012 28.3 21.4 177 50-244 25-230 (318)
328 4a0p_A LRP6, LRP-6, low-densit 72.3 64 0.0022 30.1 24.0 196 21-243 36-235 (628)
329 2zwa_A Leucine carboxyl methyl 70.3 74 0.0025 30.1 15.3 68 84-151 499-579 (695)
330 3b7f_A Glycosyl hydrolase, BNR 70.0 53 0.0018 28.3 25.8 188 41-236 24-254 (394)
331 4a0p_A LRP6, LRP-6, low-densit 69.0 75 0.0026 29.7 27.1 180 46-244 12-196 (628)
332 3s94_A LRP-6, low-density lipo 66.4 84 0.0029 29.3 24.1 182 47-245 16-202 (619)
333 2be1_A Serine/threonine-protei 66.4 42 0.0014 28.6 9.6 109 40-152 11-133 (339)
334 4asc_A Kelch repeat and BTB do 65.9 55 0.0019 27.0 18.7 137 85-235 98-253 (315)
335 2woz_A Kelch repeat and BTB do 63.6 62 0.0021 26.7 17.0 112 85-204 109-238 (318)
336 2wg3_C Hedgehog-interacting pr 62.0 88 0.003 27.9 14.2 110 76-185 15-160 (463)
337 1flg_A Protein (quinoprotein e 61.9 99 0.0034 28.5 31.3 67 40-107 118-195 (582)
338 4gq2_M Nucleoporin NUP120; bet 60.0 1.4E+02 0.0047 29.6 13.9 31 320-351 237-267 (950)
339 2zwa_A Leucine carboxyl methyl 54.5 1.4E+02 0.0049 28.1 20.8 152 84-244 396-576 (695)
340 2xzh_A Clathrin heavy chain 1; 46.9 1.4E+02 0.0047 25.6 19.6 156 76-243 153-330 (365)
341 4gq2_M Nucleoporin NUP120; bet 46.7 74 0.0025 31.5 8.9 34 23-62 237-270 (950)
342 1xi4_A Clathrin heavy chain; a 44.8 3E+02 0.01 28.9 17.3 192 40-245 78-289 (1630)
343 4fhn_B Nucleoporin NUP120; pro 43.1 1.3E+02 0.0046 30.3 10.3 31 320-351 239-269 (1139)
344 3sbq_A Nitrous-oxide reductase 41.0 61 0.0021 29.9 6.6 79 219-297 327-407 (638)
345 1xi4_A Clathrin heavy chain; a 39.9 3.6E+02 0.012 28.4 14.2 141 48-195 124-290 (1630)
346 3zwu_A Alkaline phosphatase PH 37.3 1.3E+02 0.0046 27.8 8.5 57 78-135 479-547 (592)
347 3sbq_A Nitrous-oxide reductase 36.1 2.7E+02 0.0091 25.8 14.3 103 78-182 326-453 (638)
348 3f7f_A Nucleoporin NUP120; nuc 34.9 3E+02 0.01 26.2 12.2 30 120-151 223-252 (729)
349 1sqj_A OXG-RCBH, oligoxylogluc 23.2 5E+02 0.017 24.9 17.9 158 74-235 14-190 (789)
350 3f7f_A Nucleoporin NUP120; nuc 23.2 1.5E+02 0.005 28.3 6.1 22 40-61 232-253 (729)
351 2xzh_A Clathrin heavy chain 1; 22.6 3.6E+02 0.012 23.0 30.6 192 40-245 79-290 (365)
352 1bpo_A Protein (clathrin); cla 20.9 4.5E+02 0.016 23.5 22.4 179 48-238 124-324 (494)
353 4a9v_A PHOX; hydrolase, beta-p 20.7 4.6E+02 0.016 24.2 8.7 60 76-136 477-548 (592)
No 1
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-49 Score=353.15 Aligned_cols=326 Identities=48% Similarity=0.964 Sum_probs=261.3
Q ss_pred eeeeeeecCCcc-ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE
Q 018675 11 LREIQTLEGHTD-RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 11 ~~~~~~~~gH~~-~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
+..+.++.+|.+ .|++++|+|+ +++||||+.|++|+||+..++.. .+.......|...|++++|+|++++|
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~------g~~las~~~D~~i~iw~~~~~~~--~~~~~~~~~h~~~v~~~~~sp~g~~l 76 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPA------GTLLASCGGDRRIRIWGTEGDSW--ICKSVLSEGHQRTVRKVAWSPCGNYL 76 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTT------SSCEEEEETTSCEEEEEEETTEE--EEEEEECSSCSSCEEEEEECTTSSEE
T ss_pred EEEeeeecCCCCCcEEEEEECCC------CCEEEEEcCCCeEEEEEcCCCcc--eeeeeeccccCCcEEEEEECCCCCEE
Confidence 467889999998 9999999997 57999999999999999876532 12223335689999999999999999
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
++|+.|+++++|+...+...+...+.+|...|.+++|+|++++|++|+.|++|++||+.......++..+.+|...|.++
T Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 77 ASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp EEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred EEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 99999999999998777666778889999999999999999999999999999999998766666777888999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc
Q 018675 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (352)
+|+|++.+|++++.|+.|++|+.... .+.+...+ .+|...|++++|+|++++|++|+.|++|++|+.......
T Consensus 157 ~~~p~~~~l~s~s~d~~i~~w~~~~~---~~~~~~~~----~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 157 VWHPSQELLASASYDDTVKLYREEED---DWVCCATL----EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp EECSSSSCEEEEETTSCEEEEEEETT---EEEEEEEE----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred EECCCCCEEEEEeCCCcEEEEEecCC---CEEEEEEe----cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 99999999999999999999986542 12222333 479999999999999999999999999999986432111
Q ss_pred cC----CCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEE
Q 018675 250 SG----DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324 (352)
Q Consensus 250 ~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 324 (352)
.. .....+.....+.+.|...++.++|++++ .+++++.|+.+++|+.........+..........+|...|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEE
T ss_pred ccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEe
Confidence 00 01122344455666688899999999865 79999999999999765432211122222223446899999999
Q ss_pred EecCCCcceEEEecCCCeEEEEeeccC
Q 018675 325 QWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 325 ~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+|+|++..+|||||.||+|++|++..+
T Consensus 310 ~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 310 AWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred EEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 999988668999999999999999754
No 2
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-46 Score=326.58 Aligned_cols=313 Identities=37% Similarity=0.762 Sum_probs=238.7
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeec-ceecceEEEEECCCCCEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE-MHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l 89 (352)
+..+.+|++|.+.|++++|+|+ +||||+.|++|++|++..+.. .....+.. .|...|++++|+|++++|
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--------~las~~~D~~i~lw~~~~~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~l 73 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--------ILATGSTDRKIKLVSVKYDDF--TLIDVLDETAHKKAIRSVAWRPHTSLL 73 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--------EEEEEESSSCEEEEECSSSCC--EEEEEECTTCCCSCEEEEEECTTSSEE
T ss_pred cccceeeccCCCceeeeccCCC--------EEEEEcCCCEEEEEEecCCCe--EEEEEEecCCccCCEEEEEECCCCCEE
Confidence 3567889999999999999984 899999999999999876421 11222322 388999999999999999
Q ss_pred EEEeCCCcEEEEEccCC-----ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC-CCeeEEEEEeecCc
Q 018675 90 ATASFDATTCIWEDVGG-----DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP-GNEFECVSVLQGHA 163 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~-----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~h~ 163 (352)
++|+.|++|++|+.... ...+...+.+|...|++++|+|++++|++|+.|++|++||+.. +...+++..+.+|.
T Consensus 74 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 74 AAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp EEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred EEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 99999999999987432 2245667889999999999999999999999999999999843 33456677788999
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC--CCEEEEEeCCCcEEEE
Q 018675 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--GDKLVSCSDDLTIKIW 241 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~--~~~l~s~~~dg~i~iw 241 (352)
..|.+++|+|++.+|++++.|+.|++|+.... .+.+...+ .+|...|++++|+|+ +.+|++|+.|++|++|
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~---~~~~~~~~----~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDD---DWECVAVL----NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEEETT---EEEEEEEE----CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCC---CeeEEEEc----cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 99999999999999999999999999986432 12333333 479999999999998 7789999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCc-c
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM-D 320 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~ 320 (352)
+++..... ....|.....+...|...+++++|++++++++++.|+.+++|+..... ...+.....+|.. .
T Consensus 227 ~~~~~~~~---~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~------~~~~~~~~~~h~~~~ 297 (330)
T 2hes_X 227 KYMGDDED---DQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGE------WKVFAKRALCHGVYE 297 (330)
T ss_dssp EEEEECTT---SCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTE------EEEEEEESCTTTTSC
T ss_pred EecCCCcc---ccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCc------eEEEeccccccccce
Confidence 87532110 111222333333447888999999998999999999999999754211 1112223457876 8
Q ss_pred eeEEEecC--CCcceEEEecCCCeEEEEeecc
Q 018675 321 VNSVQWSP--GERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 321 i~~~~~sp--~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|++++|+| ++ .+|+||+.||+|+||++..
T Consensus 298 v~~v~~~~~~~~-~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 298 INVVKWLELNGK-TILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEEC------CCEEEEETTSEEEEEEC--
T ss_pred EEEEEEecCCCc-eEEEEecCCCcEEEEEecc
Confidence 99999999 45 4789999999999999865
No 3
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.7e-45 Score=319.77 Aligned_cols=306 Identities=25% Similarity=0.411 Sum_probs=238.3
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+....+|+||.+.|++++|+|.+ +.+|+|||.|++|++|++................|...|.+++|+|++++|+
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~-----~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 81 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQ-----PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYAL 81 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSC-----TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEEEEEEccccceEEEEEccCCC-----ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEE
Confidence 56778899999999999999964 3689999999999999986432211111112246899999999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+|+.|++|++||..++ ++...+.+|...|.+++|+|++.+|++++.|++|++||+.. .++..+.+|...+.++.
T Consensus 82 s~s~D~~v~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 82 SASWDKTLRLWDVATG--ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG----QCLATLLGHNDWVSQVR 155 (319)
T ss_dssp EEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS----CEEEEECCCSSCEEEEE
T ss_pred EEeCCCEEEEEECCCC--CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeEEEEeccCCcEEEEE
Confidence 9999999999998776 45677889999999999999999999999999999999853 24567788999999999
Q ss_pred EcCCC------CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 171 WHPTM------DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 171 ~~~~~------~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
++|.. ..+++++.|+.|++|++... ..... ..+|...|.+++|+|++++|++|+.||.|++||+.
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-----~~~~~----~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQF-----QIEAD----FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETTTT-----EEEEE----ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECCcc-----hhhee----ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 99853 48999999999999987542 22222 24799999999999999999999999999999975
Q ss_pred ccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEE
Q 018675 245 ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324 (352)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 324 (352)
..+ ....+. ....+.+++|+|++.+++++.++.+++|......+..... .........|...+.++
T Consensus 227 ~~~-----------~~~~~~--~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~ 292 (319)
T 3frx_A 227 AKK-----------AMYTLS--AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLR-PEFAGYSKAAEPHAVSL 292 (319)
T ss_dssp TTE-----------EEEEEE--CCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEEC-CCCTTCCGGGCCCEEEE
T ss_pred CCc-----------EEEEec--CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccC-ccccccccCcCcceeEE
Confidence 322 222222 2457899999999866666667779999765422211100 00011123567789999
Q ss_pred EecCCCcceEEEecCCCeEEEEeeccC
Q 018675 325 QWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 325 ~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+|+|+++ +|++|+.||+|+||++.+.
T Consensus 293 ~~spdg~-~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 293 AWSADGQ-TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EECTTSS-EEEEEETTSCEEEEEEEEC
T ss_pred EECCCCC-EEEEeecCceEEEEEEeec
Confidence 9999997 6789999999999999753
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-44 Score=318.74 Aligned_cols=293 Identities=24% Similarity=0.431 Sum_probs=240.2
Q ss_pred ceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE
Q 018675 10 ELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 10 ~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
.+....+|+||.+.|++++|+|+ +++|+|||.|++|++|+..+...... + ..|...|.+++|+|++++|
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d------~~~l~s~s~Dg~v~iWd~~~~~~~~~----~-~~~~~~v~~~~~s~~~~~l 112 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTD------SRLLLSASQDGKLIIWDSYTTNKVHA----I-PLRSSWVMTCAYAPSGNYV 112 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTT------SSEEEEEETTTEEEEEETTTCCEEEE----E-ECSSSCEEEEEECTTSSEE
T ss_pred cchhheeecCCCCceEEEEECCC------CCEEEEEeCCCcEEEEECCCCCcceE----e-ecCCccEEEEEECCCCCEE
Confidence 45667889999999999999997 57999999999999999887654322 1 3478899999999999999
Q ss_pred EEEeCCCcEEEEEccCCc--eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 90 ATASFDATTCIWEDVGGD--YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
++|+.|+.+++|+..+.+ ......+.+|.+.|.++.|++++. +++++.|++|++||+..+ .++..+.+|...|.
T Consensus 113 ~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~ 188 (340)
T 1got_B 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG---QQTTTFTGHTGDVM 188 (340)
T ss_dssp EEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT---EEEEEECCCSSCEE
T ss_pred EEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC---cEEEEEcCCCCceE
Confidence 999999999999976542 234556789999999999998765 889999999999998755 34567889999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
+++|+|++.++++|+.|+.|++|++... .+...+ .+|...|.+++|+|++.+|++|+.||+|++||++...
T Consensus 189 ~~~~~~~~~~l~sg~~d~~v~~wd~~~~-----~~~~~~----~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 189 SLSLAPDTRLFVSGACDASAKLWDVREG-----MCRQTF----TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTC-----SEEEEE----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCC-----eeEEEE----cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 9999999999999999999999987643 223333 3788999999999999999999999999999986322
Q ss_pred cccCCCCccceeeEEee-cccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEE
Q 018675 248 MQSGDGYASWRHLCTIS-GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 325 (352)
. ...+. ..+...+.+++|+|++ ++++++.|+.+++|+.... .......+|...|++++
T Consensus 260 ~-----------~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------~~~~~~~~h~~~v~~~~ 319 (340)
T 1got_B 260 E-----------LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA---------DRAGVLAGHDNRVSCLG 319 (340)
T ss_dssp E-----------EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---------CEEEEEECCSSCEEEEE
T ss_pred E-----------EEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC---------cEeeEeecCCCcEEEEE
Confidence 1 11111 1123468899999976 8999999999999976432 12344578999999999
Q ss_pred ecCCCcceEEEecCCCeEEEEe
Q 018675 326 WSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 326 ~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
|+|+++ +|+|||.||+|+||+
T Consensus 320 ~s~dg~-~l~s~s~D~~i~iWd 340 (340)
T 1got_B 320 VTDDGM-AVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSS-CEEEEETTSCEEEEC
T ss_pred EcCCCC-EEEEEcCCccEEecC
Confidence 999986 688999999999996
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-44 Score=328.56 Aligned_cols=289 Identities=31% Similarity=0.519 Sum_probs=241.3
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
...+.||.+.|++++|+|+ +++|+||+.|++|++||..++... ..+ ..|...|++++|+|++++|++|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~------~~~l~s~s~Dg~i~vwd~~~~~~~----~~l-~~h~~~V~~v~~~~~~~~l~sgs 169 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPV------FSVMVSASEDATIKVWDYETGDFE----RTL-KGHTDSVQDISFDHSGKLLASCS 169 (410)
T ss_dssp SCEEECCSSCEEEEEECSS------SSEEEEEESSSCEEEEETTTCCCC----EEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred eEeecccCCcEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCcEE----EEE-eccCCcEEEEEEcCCCCEEEEEe
Confidence 4567899999999999997 479999999999999999876432 222 45889999999999999999999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.|++|++||..+. .++..+.+|...|.+++|+|++++|++|+.|++|++||+..+. ++..+.+|...+.++.++|
T Consensus 170 ~D~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 170 ADMTIKLWDFQGF--ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQ 244 (410)
T ss_dssp TTSCCCEEETTSS--CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECT
T ss_pred CCCeEEEEeCCCC--ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEEEEeCCCccEEEEEECC
Confidence 9999999998765 4567788999999999999999999999999999999997654 4667889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC--------------------CCEEEEEe
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK--------------------GDKLVSCS 233 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~--------------------~~~l~s~~ 233 (352)
++.++++++.|+.|++|++.... +...+ .+|...|.+++|+|+ +.+|++|+
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~~~~-----~~~~~----~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs 315 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVATKE-----CKAEL----REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315 (410)
T ss_dssp TSSEEEEEETTSCEEEEETTTCC-----EEEEE----CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCc-----eeeEe----cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe
Confidence 99999999999999999875432 22333 368899999999996 67899999
Q ss_pred CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeee
Q 018675 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLK 312 (352)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 312 (352)
.|+.|++||++... ....+. .|...+.++.+++++ ++++++.|+.+++|+.... ..+.
T Consensus 316 ~D~~i~iwd~~~~~-----------~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~---------~~~~ 374 (410)
T 1vyh_C 316 RDKTIKMWDVSTGM-----------CLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK---------RCMK 374 (410)
T ss_dssp TTSEEEEEETTTTE-----------EEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS---------CCCE
T ss_pred CCCeEEEEECCCCc-----------eEEEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------ceEE
Confidence 99999999975321 222332 367789999999876 7999999999999965432 2234
Q ss_pred cccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 313 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 313 ~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
...+|...|++++|+|++. +|+||+.||+|+||+++
T Consensus 375 ~~~~h~~~v~~l~~~~~~~-~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 375 TLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECCSSCEEEEEECSSSS-CEEEEETTSEEEEEC--
T ss_pred EEcCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCC
Confidence 4568999999999999986 68899999999999864
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.6e-44 Score=314.29 Aligned_cols=298 Identities=21% Similarity=0.291 Sum_probs=241.3
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
......+++|.+.|++++|+|+.. ..+.+|+|||.|++|++|++...... .... ...|...|.+++|+|++++++
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~--~~~~~l~tgs~D~~v~vW~~~~~~~~--~~~~-l~gh~~~v~~~~~~~~~~~l~ 96 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKK--ENSETVVTGSLDDLVKVWKWRDERLD--LQWS-LEGHQLGVVSVDISHTLPIAA 96 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC---------CEEEEEETTSCEEEEEEETTEEE--EEEE-ECCCSSCEEEEEECSSSSEEE
T ss_pred hheeeecccCCCcEEEEEEecCCC--CCCCEEEEEcCCCCEEEEECCCCCee--eeee-eccCCCCEEEEEECCCCCEEE
Confidence 355677889999999999998521 12468999999999999998765321 1111 246889999999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+++.|++|++||..+++ ++..+..|...+.+++|+|++++|++++.|+++++|++..+.. ...+..|...+.+++
T Consensus 97 s~s~D~~i~lWd~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~---~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 97 SSSLDAHIRLWDLENGK--QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK---EYSLDTRGKFILSIA 171 (321)
T ss_dssp EEETTSEEEEEETTTTE--EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE---EEEEECSSSCEEEEE
T ss_pred EEeCCCcEEEEECCCCC--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce---eEEecCCCceEEEEE
Confidence 99999999999987763 4566778888999999999999999999999999999976643 445667888899999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
|+|++++|++++.|+.|++|++... .....+ .+|..+|.+++|+|++++|++++.|+.|++||++...
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~-----~~~~~~----~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~--- 239 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATG-----KLLHTL----EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN--- 239 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT-----EEEEEE----CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC---
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCC-----cEEEEE----cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc---
Confidence 9999999999999999999987543 233333 3788999999999999999999999999999975321
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCC
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPG 329 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~ 329 (352)
....+ ..|...+.+++|+|++ ++++++.|+++++|+.... ..+....+|...|++++|+|+
T Consensus 240 --------~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~---------~~~~~~~~h~~~v~~v~~s~~ 301 (321)
T 3ow8_A 240 --------LAGTL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR---------TCVHTFFDHQDQVWGVKYNGN 301 (321)
T ss_dssp --------EEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEECTT
T ss_pred --------eeEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---------EEEEEEcCCCCcEEEEEECCC
Confidence 12222 2467789999999976 8999999999999976432 234456789999999999999
Q ss_pred CcceEEEecCCCeEEEEeec
Q 018675 330 ERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 330 ~~~~l~s~~~Dg~i~iw~~~ 349 (352)
++ .|+|++.||+|+|||+.
T Consensus 302 g~-~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 302 GS-KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SS-EEEEEETTCCEEEEECC
T ss_pred CC-EEEEEeCCCeEEEEeCC
Confidence 86 57899999999999974
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-43 Score=315.22 Aligned_cols=295 Identities=23% Similarity=0.379 Sum_probs=238.1
Q ss_pred cceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCE
Q 018675 9 YELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 9 ~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 88 (352)
+......+|+||.+.|++++|+|+ +++|+|||.|++|++|+..+..... .+ ..|...|.+++|+|+|..
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~d------~~~l~s~s~Dg~v~vWd~~~~~~~~----~~-~~~~~~v~~~~~sp~g~~ 120 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCKD------KRRIVSSSQDGKVIVWDSFTTNKEH----AV-TMPCTWVMACAYAPSGCA 120 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECTT------SSEEEEEETTSEEEEEETTTCCEEE----EE-ECSSSCCCEEEECTTSSE
T ss_pred cccEEEEEecCCCCeEEEEEECCC------CCEEEEEeCCCeEEEEECCCCCcce----EE-ecCCCCEEEEEECCCCCE
Confidence 345667889999999999999997 5799999999999999987764322 11 346778999999999999
Q ss_pred EEEEeCCCcEEEEEccCCc----eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 89 LATASFDATTCIWEDVGGD----YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
+++|+.|+.+++|+..... ......+.+|.+.|.+++|+|++..|++++.|++|++||+..+. ++..+.+|..
T Consensus 121 lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~---~~~~~~~h~~ 197 (354)
T 2pbi_B 121 IACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ---LLQSFHGHGA 197 (354)
T ss_dssp EEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEEECCSS
T ss_pred EEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEcCCCC
Confidence 9999999999999864321 12344567899999999999999999999999999999997654 4567889999
Q ss_pred CeeEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 165 DVKMVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 165 ~v~~~~~~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
.+.+++++|+ +..|++|+.|+.|++||+... .+...+ .+|...|.+++|+|++.+|++|+.|++|++||
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~-----~~~~~~----~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG-----QCVQAF----ETHESDVNSVRYYPSGDAFASGSDDATCRLYD 268 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTC-----CEEEEE----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC-----cEEEEe----cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 9999999874 679999999999999987653 233333 36889999999999999999999999999999
Q ss_pred CCccccccCCCCccceeeEEeec-ccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcc
Q 018675 243 ADITRMQSGDGYASWRHLCTISG-YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 320 (352)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 320 (352)
++..+. ...+.. .+...+.++.|++++ ++++++.|+.+++|+.... ..+....+|...
T Consensus 269 ~~~~~~-----------~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------~~~~~l~~h~~~ 328 (354)
T 2pbi_B 269 LRADRE-----------VAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG---------SRVSILFGHENR 328 (354)
T ss_dssp TTTTEE-----------EEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---------SEEEEECCCSSC
T ss_pred CCCCcE-----------EEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC---------ceEEEEECCCCc
Confidence 864221 111111 123357788999876 7889999999999976432 123345689999
Q ss_pred eeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 321 VNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 321 i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
|++++|+|+++ +|+||+.||+|+||+
T Consensus 329 v~~l~~spdg~-~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 329 VSTLRVSPDGT-AFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEECTTSS-CEEEEETTSEEEEEC
T ss_pred EEEEEECCCCC-EEEEEcCCCCEEecC
Confidence 99999999986 688999999999996
No 8
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-43 Score=312.65 Aligned_cols=309 Identities=20% Similarity=0.369 Sum_probs=239.7
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+....+|+||.+.|++|+|+|+. +++|+|||.|++|+||++.+..............|...|.+++|+|++++|+
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~-----~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~ 102 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQF-----PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 102 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTC-----TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred eEEEEEECCccCCEEEEEEeCCC-----CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEE
Confidence 45556899999999999999974 4799999999999999987654322222222256889999999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+|+.|+.+++|+..... .......+...+..+.+++++.+|++++.|+.+++||+.... .......+|...+..++
T Consensus 103 s~~~d~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~--~~~~~~~~~~~~v~~~~ 178 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGT--TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC--KYTVQDESHSEWVSCVR 178 (340)
T ss_dssp EEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE--EEEECSSSCSSCEEEEE
T ss_pred EEcccccceEEeecccc--eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc--eEEEEeccccCcccceE
Confidence 99999999999977653 344455677888999999999999999999999999986432 33445667889999999
Q ss_pred EcCCC--CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccc
Q 018675 171 WHPTM--DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248 (352)
Q Consensus 171 ~~~~~--~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (352)
|+++. .++++++.|+.|++|+.... .....+ .+|...|.+++|+|++++|++|+.||.|++||++..+
T Consensus 179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~-----~~~~~~----~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~- 248 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKLVKVWNLANC-----KLKTNH----IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK- 248 (340)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTT-----EEEEEE----CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-
T ss_pred EccCCCCcEEEEEcCCCEEEEEECCCC-----ceeeEe----cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc-
Confidence 98764 57889999999999987543 223322 3788999999999999999999999999999976322
Q ss_pred ccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecC
Q 018675 249 QSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 328 (352)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 328 (352)
....+. +...+..+.+++++.+++++.|+.+++|+....................+|...|++++|+|
T Consensus 249 ----------~~~~~~--~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 316 (340)
T 4aow_A 249 ----------HLYTLD--GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 316 (340)
T ss_dssp ----------EEEEEE--CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT
T ss_pred ----------eeeeec--CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC
Confidence 222222 34568899999999999999999999998765433222122222234467999999999999
Q ss_pred CCcceEEEecCCCeEEEEeeccC
Q 018675 329 GERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 329 ~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+++ +|+||+.||.|+||+++++
T Consensus 317 dg~-~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 317 DGQ-TLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp TSS-EEEEEETTSCEEEEEEEC-
T ss_pred CCC-EEEEEeCCCEEEEEeCCCc
Confidence 986 6889999999999999864
No 9
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.3e-43 Score=312.14 Aligned_cols=313 Identities=21% Similarity=0.284 Sum_probs=234.6
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee---eeeeeeeecceecceEEEEECCCCC
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF---WNCKAVLEEMHTRTVRSCAWSPSGK 87 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~ 87 (352)
.....+|+||.+.|++++|.+.......+++|+|||.|++|++|++...... ..+.. ....|...|.+++|+|+++
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~-~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHK-ALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEE-EECCCSSCEEEEEECSSTT
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccc-hhccCCCceEEEEECCCCC
Confidence 4566789999999999999321100012579999999999999998654211 11112 2246889999999999999
Q ss_pred EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
++++|+.|++|++||..+++ +...+.+|...|.+++|+|++++|++++.|++|++||+... .........+|...+.
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEEEEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEE
T ss_pred EEEEEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceee
Confidence 99999999999999987764 46678899999999999999999999999999999998632 1111111236888899
Q ss_pred EEEEcCCC----------CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCc
Q 018675 168 MVQWHPTM----------DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT 237 (352)
Q Consensus 168 ~~~~~~~~----------~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~ 237 (352)
+++|+|++ .++++++.|+.|++|+... .....+ .+|...|.+++|+|++++|++|+.||.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------~~~~~~----~~h~~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF------QIRYTF----KAHESNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT------EEEEEE----ECCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC------ceeEEE----cCccccceEEEECCCCCEEEEEcCCCe
Confidence 99999986 7899999999999998321 222222 368899999999999999999999999
Q ss_pred EEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCcccc--Ccc--cceeeec
Q 018675 238 IKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLID--GPS--YKMLLKK 313 (352)
Q Consensus 238 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~--~~~--~~~~~~~ 313 (352)
|++||+..... ....+. +...+.+++|+|++.+++++.|+.+++|+........ ... .......
T Consensus 237 v~iwd~~~~~~----------~~~~~~--~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 304 (343)
T 2xzm_R 237 LLIWDILNLTY----------PQREFD--AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEG 304 (343)
T ss_dssp EEEEESSCCSS----------CSEEEE--CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTT
T ss_pred EEEEECCCCcc----------cceeec--CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhh
Confidence 99999732110 011111 3446899999999877778889999999765432211 000 0000112
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..+|...|++++|+|+++ +|++|+.||+|++|++.+
T Consensus 305 ~~~~~~~v~~~~~sp~g~-~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 305 QKGKNPQCTSLAWNALGK-KLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp BCCSCCCEEEEEECSSSC-CEEEEETTSEEEEEEEEE
T ss_pred hcCCCCceEEEEECCCCC-eEEEecCCceEEEEEEEc
Confidence 247888999999999986 578999999999999875
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.7e-43 Score=306.48 Aligned_cols=295 Identities=20% Similarity=0.306 Sum_probs=237.6
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+....+|++|.+.|++++|+|+ +++|+|++.|++|++|+..++..... + ..|..+|.+++|+|++++|+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~------~~~l~s~~~dg~v~lWd~~~~~~~~~----~-~~~~~~v~~~~~~~~~~~l~ 71 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPT------EPWVLTTLYSGRVELWNYETQVEVRS----I-QVTETPVRAGKFIARKNWII 71 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSS------SSEEEEEETTSEEEEEETTTTEEEEE----E-ECCSSCEEEEEEEGGGTEEE
T ss_pred ceeEEeecCCCCceEEEEECCC------CCEEEEEcCCCcEEEEECCCCceeEE----e-eccCCcEEEEEEeCCCCEEE
Confidence 4556789999999999999997 57999999999999999987643221 2 34778999999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+|+.|++|++||..+++ ++..+.+|.+.|++++|+|++.+|++|+.|++|++||+..+. .....+.+|...|.+++
T Consensus 72 s~s~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVA 147 (304)
T ss_dssp EEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT--EEEEEECCCCSCEEEEE
T ss_pred EECCCCEEEEEECCCCc--EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc--chhhhhcccCCcEEEEE
Confidence 99999999999987764 466788999999999999999999999999999999987553 33456789999999999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC--CCCEEEEEeCCCcEEEEcCCccc
Q 018675 171 WHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA--KGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 171 ~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~--~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
|+| ++..|++|+.|+.|++|++..... ...+ ..+|...+..++|+| ++.+|++|+.|++|++||++..+
T Consensus 148 ~~p~~~~~l~sgs~D~~v~iwd~~~~~~-----~~~~---~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTP-----NFTL---TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp ECTTCTTEEEEEETTSEEEEEETTCSSC-----SEEE---ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCc-----ccee---ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc
Confidence 999 578999999999999999764321 1111 125667899999987 67899999999999999975321
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
....+. .|...+..+.|+|++ ++++++.|+++++|+.... .+......|...+.+++|
T Consensus 220 -----------~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~---------~~~~~~~~~~~~~~~~~~ 278 (304)
T 2ynn_A 220 -----------CVATLE-GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---------KVEKTLNVGLERSWCIAT 278 (304)
T ss_dssp -----------EEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---------CEEEEECCSSSSEEEEEE
T ss_pred -----------cceeeC-CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC---------ceeeeccCCCccEEEEEE
Confidence 222333 467789999999976 8999999999999976532 233455678889999999
Q ss_pred cCCCcc-eEEEecCCCeEEEEeecc
Q 018675 327 SPGERR-LLASASDDGMIKIWELAN 350 (352)
Q Consensus 327 sp~~~~-~l~s~~~Dg~i~iw~~~~ 350 (352)
+|++.. ++++|+ |..+.+|++.+
T Consensus 279 ~~~~~~~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 279 HPTGRKNYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp CTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred CCCCCceEEEEec-CCceEEEEecc
Confidence 998765 466666 55577888764
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.6e-44 Score=323.95 Aligned_cols=310 Identities=23% Similarity=0.382 Sum_probs=236.9
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
.....+|+||.+.|++++|+|+ +++|+|||.|++|++||..++.... .+ ..|...|.+++|+|+|++|+
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~------~~~l~s~s~D~~v~iWd~~~~~~~~----~~-~~h~~~v~~~~~s~~g~~la 124 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPE------KNWIVSASQDGRLIVWNALTSQKTH----AI-KLHCPWVMECAFAPNGQSVA 124 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTT------SSCEEEEETTSEEEEEETTTTEEEE----EE-ECCCTTCCCCEECTTSSEEE
T ss_pred eEEeecccccccEEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCccce----EE-ecCCCCEEEEEECCCCCEEE
Confidence 4567789999999999999997 4789999999999999998765322 22 35888999999999999999
Q ss_pred EEeCCCcEEEEEccCC-----ceeeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEE--EeecC
Q 018675 91 TASFDATTCIWEDVGG-----DYECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVS--VLQGH 162 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~-----~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~h 162 (352)
+|+.|+.+++|+.... .......+.+|.+.|.++.|.|++ ..|++|+.|++|++||+..+....... ...+|
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 9999999999997532 122344577999999999999964 579999999999999997765322211 11578
Q ss_pred ccCeeEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 163 AQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 163 ~~~v~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
...+.++.|+| ++.++++|+.|+.|++||+..... ....+ .+|...|++++|+|++.+|++|+.||+|++|
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~----~~~~~----~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lw 276 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR----AVRTY----HGHEGDINSVKFFPDGQRFGTGSDDGTCRLF 276 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC----CCEEE----CCCSSCCCEEEECTTSSEEEEECSSSCEEEE
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc----ceEEE----CCcCCCeEEEEEecCCCeEEEEcCCCeEEEE
Confidence 88999999987 788999999999999999764321 12222 3799999999999999999999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcc
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 320 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 320 (352)
|++....... +.........+...+.+++|++++ ++++|+.|+.+++|+...... ...+.....+|...
T Consensus 277 d~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~-----~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 277 DMRTGHQLQV-----YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM-----VLNLGTLQNSHEGR 346 (380)
T ss_dssp ETTTTEEEEE-----ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE-----EEEECCSCSSCCCC
T ss_pred ECCCCcEEEE-----ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce-----EEEEecccCCCCCc
Confidence 9864321100 000000000122347789999876 789999999999997643221 11111223689999
Q ss_pred eeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 321 VNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 321 i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|++++|+|+++ +|+|||.||+|+||++..
T Consensus 347 v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 347 ISCLGLSSDGS-ALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CCEEEECSSSS-EEEEECTTSCEEEEECCS
T ss_pred eEEEEECCCCC-EEEEeeCCCCEEEEecCC
Confidence 99999999986 688999999999999864
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=305.40 Aligned_cols=294 Identities=19% Similarity=0.226 Sum_probs=224.6
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCC-----Ccee-eeeeeeeecceecceEEEEECCCCCEEE
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA-----SSRF-WNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~-----~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
..+|...|.+++|+|+ +.+|++++ |+++|+|+... .... ..........|...|++++|+|++ .|+
T Consensus 26 ~~~~~~~v~~~~fs~d------G~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~ 97 (344)
T 4gqb_B 26 PACMERQLEAARYRSD------GALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GIL 97 (344)
T ss_dssp CSSCCSEEEEEEECTT------SCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEE
T ss_pred cccccCCEEEEEECCC------CCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEE
Confidence 3468888999999997 57888877 77888886321 0000 000001112356789999999985 678
Q ss_pred EEeCCCcEEEEEccCCceee--eEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 91 TASFDATTCIWEDVGGDYEC--VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
+|+.||+|++||..+++... .....+|.+.|++++|+|++++|++|+.|++|++||+..+ +++..+.+|...|.+
T Consensus 98 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~---~~~~~~~~h~~~V~~ 174 (344)
T 4gqb_B 98 VASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ---VVLSSYRAHAAQVTC 174 (344)
T ss_dssp EEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEE
T ss_pred EEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---cEEEEEcCcCCceEE
Confidence 99999999999987765322 2345689999999999999999999999999999998755 456778899999999
Q ss_pred EEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCcc
Q 018675 169 VQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 169 ~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~~ 246 (352)
++|+|++. ++++++.|+.|++||+.... ....+. ...|...+.+++|+|+ +.+|++|+.||+|++||++..
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~--~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPK-----PASQIG--CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST 247 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSS-----CEEECC------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-
T ss_pred EEecCCCCCceeeeccccccccccccccc-----eeeeee--cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC
Confidence 99999874 78999999999999876542 122221 1245667999999995 568899999999999998632
Q ss_pred ccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEE
Q 018675 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324 (352)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 324 (352)
+ ....+. .|...|.+++|+|++ ++++++.|++|++|+.... ++ ....+|...|+++
T Consensus 248 ~-----------~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~---------~~-~~~~~H~~~V~~v 305 (344)
T 4gqb_B 248 S-----------CVLSSA-VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS---------EL-FRSQAHRDFVRDA 305 (344)
T ss_dssp ------------CCEEEE-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC---------EE-EEECCCSSCEEEE
T ss_pred c-----------EEEEEc-CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---------cE-EEEcCCCCCEEEE
Confidence 2 122232 477889999999875 6899999999999965432 12 2356899999999
Q ss_pred EecCCCcceEEEecCCCeEEEEeecc
Q 018675 325 QWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 325 ~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+|+|+++.+|+|+|.||+|++|++..
T Consensus 306 ~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 306 TWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 99999988899999999999999864
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.2e-41 Score=293.53 Aligned_cols=293 Identities=29% Similarity=0.497 Sum_probs=233.9
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
....++.||.+.|++++|+|+ +++|++++.|+.+++|+..++... ..+ ..|...|.+++|+|++++|++
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~------~~~l~s~~~dg~i~iw~~~~~~~~----~~~-~~h~~~v~~~~~~~~~~~l~s 82 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPN------GEWLASSSADKLIKIWGAYDGKFE----KTI-SGHKLGISDVAWSSDSNLLVS 82 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEE----EEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred eeEEEEcccCCcEEEEEECCC------CCEEEEeeCCCeEEEEeCCCcccc----hhh-ccCCCceEEEEEcCCCCEEEE
Confidence 556788999999999999997 579999999999999998766432 122 458889999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
|+.|+.+++||..+++ ++..+.+|...|.++.|+|++++|++++.|++|++||+..+. ++..+..|...+.++.|
T Consensus 83 ~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 83 ASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK---CLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp EETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEE
T ss_pred ECCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE---EEEEecCCCCcEEEEEE
Confidence 9999999999987663 466788999999999999999999999999999999997654 45667789999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
+|++.++++++.|+.|++|++.... ....+ ...+...+..++|+|++++|++++.||.|++||++..+.
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--- 226 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQ-----CLKTL---IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--- 226 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCC-----EEEEE---CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE---
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCc-----eeeEE---eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE---
Confidence 9999999999999999999876432 22222 224567899999999999999999999999999864321
Q ss_pred CCCccceeeEEeecccC--cceE-EEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecC
Q 018675 252 DGYASWRHLCTISGYHD--RTIF-SVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 328 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~--~~i~-~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 328 (352)
...+..... ..+. ......+.++++++.|+.+++|+.... .++....+|...|.+++|+|
T Consensus 227 --------~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~---------~~~~~~~~h~~~v~~~~~~p 289 (312)
T 4ery_A 227 --------LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK---------EIVQKLQGHTDVVISTACHP 289 (312)
T ss_dssp --------EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECS
T ss_pred --------EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc---------hhhhhhhccCCcEEEEeecC
Confidence 111111111 1111 222233558999999999999976432 23455678999999999999
Q ss_pred CCcceEEEec--CCCeEEEEeec
Q 018675 329 GERRLLASAS--DDGMIKIWELA 349 (352)
Q Consensus 329 ~~~~~l~s~~--~Dg~i~iw~~~ 349 (352)
++. ++++++ .|++|++|+..
T Consensus 290 ~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 290 TEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSS-EEEEEECTTTCCEEEEECC
T ss_pred cCC-ceEEEEccCCccEEEecCC
Confidence 986 677776 69999999974
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2e-41 Score=322.10 Aligned_cols=305 Identities=23% Similarity=0.334 Sum_probs=233.8
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+.++.+|.+.|++++|+|+. ...|+||+.|++|++|+..+.+. ...+ ..|...|++++|+|+|++|++|+
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~-----~~~l~s~s~D~~v~lwd~~~~~~----~~~l-~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSR-----PFRIISGSDDNTVAIFEGPPFKF----KSTF-GEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSS-----SCEEEEEETTSCEEEEETTTBEE----EEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred cceecCCCCCceEEEECCCC-----CeEEEEEeCCCeEEEEECCCCeE----eeee-ccccCceEEEEECCCCCEEEEEE
Confidence 35678999999999999973 23699999999999999765432 2222 45899999999999999999999
Q ss_pred CCCcEEEEEccCCceeeeEeec-------cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE------------
Q 018675 94 FDATTCIWEDVGGDYECVATLE-------GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE------------ 154 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~------------ 154 (352)
.|++|++|+..+++ +...+. +|.+.|.+++|+|++++|++++.|++|++||+..+....
T Consensus 210 ~D~~i~lwd~~~g~--~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~ 287 (611)
T 1nr0_A 210 GDGTIVLYNGVDGT--KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 287 (611)
T ss_dssp TTSCEEEEETTTCC--EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCE
T ss_pred CCCcEEEEECCCCc--EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcccee
Confidence 99999999987664 334442 799999999999999999999999999999986543211
Q ss_pred ----------------------------EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC-------
Q 018675 155 ----------------------------CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN------- 199 (352)
Q Consensus 155 ----------------------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~------- 199 (352)
+...+.+|...|++++|+|++++|++++.|+.|++|++.......
T Consensus 288 ~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~ 367 (611)
T 1nr0_A 288 LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA 367 (611)
T ss_dssp EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS
T ss_pred EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCc
Confidence 223456899999999999999999999999999999975421000
Q ss_pred --ceeE-----------------e-----------------e-------eeccCC-----------------------CC
Q 018675 200 --WHCV-----------------Q-----------------T-------ISESNN-----------------------GH 213 (352)
Q Consensus 200 --~~~~-----------------~-----------------~-------~~~~~~-----------------------~h 213 (352)
...+ . . +....+ .|
T Consensus 368 ~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~ 447 (611)
T 1nr0_A 368 TMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 447 (611)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEEC
T ss_pred ceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeec
Confidence 0000 0 0 000000 13
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEE
Q 018675 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQ 292 (352)
Q Consensus 214 ~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~ 292 (352)
...+.+++|+|+|++|++|+.|++|++|+++.... ..... ..|...+.+++|+|++ ++++++.|++++
T Consensus 448 ~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~---------~~~~~--~~h~~~v~~v~fspdg~~las~s~d~~v~ 516 (611)
T 1nr0_A 448 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV---------SEVKT--IVHPAEITSVAFSNNGAFLVATDQSRKVI 516 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE---------EEEEE--EECSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce---------eeeec--cCCCCceEEEEECCCCCEEEEEcCCCCEE
Confidence 45688999999999999999999999998742211 11111 2477889999999986 899999999999
Q ss_pred EEEccCCccccCcccceeee--cccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 293 FFVESKDDLIDGPSYKMLLK--KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~--~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+|+..... .+.. ...+|...|++++|+|+++ +|+|++.|++|+||++..
T Consensus 517 ~w~~~~~~--------~~~~~~~~~~H~~~V~~v~fspdg~-~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 517 PYSVANNF--------ELAHTNSWTFHTAKVACVSWSPDNV-RLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp EEEGGGTT--------EESCCCCCCCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTC
T ss_pred EEEcCCCC--------ceeeeeeeeecccceeEEEECCCCC-EEEEEECCCcEEEEECCC
Confidence 99764310 1111 1335999999999999986 689999999999999864
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.8e-42 Score=303.55 Aligned_cols=295 Identities=16% Similarity=0.238 Sum_probs=220.5
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeC------CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSG------DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~------D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
...+|...|++++|+|+ +.+|||||. |+++++|+..++....... .....|...|++++|+|++++
T Consensus 37 ~p~~H~~~V~~v~fSpD------G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~s~d~~~- 108 (357)
T 4g56_B 37 APACMEVQIGAVRYRRD------GALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC-TAGVQTEAGVTDVAWVSEKGI- 108 (357)
T ss_dssp ---CCCSEEEEEEECSS------SCEEEEEECSSSSSCCEEEEEESSCC---CGGGC-SEEEECSSCEEEEEEETTTEE-
T ss_pred CcccccCCEEEEEECCC------CCEEEEEcCCCCccccCeEEEEECCCCCcceeEe-cccCCCCCCEEEEEEcCCCCE-
Confidence 44679999999999997 689999997 7889999876543211111 111347788999999999865
Q ss_pred EEEeCCCcEEEEEccCCceee--eEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 90 ATASFDATTCIWEDVGGDYEC--VATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
++++.|++|++||..+++... .....+|.+.|++++|+|++++|++|+.|++|++||+..+ .++..+.+|...|.
T Consensus 109 l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~---~~~~~~~~h~~~v~ 185 (357)
T 4g56_B 109 LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK---AVLKSYNAHSSEVN 185 (357)
T ss_dssp EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEE
T ss_pred EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---cEEEEEcCCCCCEE
Confidence 567889999999987654322 2334589999999999999999999999999999998754 45667889999999
Q ss_pred EEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCc
Q 018675 168 MVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 168 ~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~ 245 (352)
+++|+|++. ++++++.|+.|++||+..... ...+ ....|...+.+++|+|+ +.+|++|+.|+.|++||++.
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-----~~~~--~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKP-----ATRI--DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSSSC-----BCBC--CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCCce-----eeee--eeccccccccchhhhhcccceEEEeecccceeEEECCC
Confidence 999999875 789999999999998765422 1111 12346678999999997 56788999999999999864
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeE
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 323 (352)
.+. ...+ ..+...+.+++|++++ ++++++.|++|++|+.... +++. ..+|...|++
T Consensus 259 ~~~-----------~~~~-~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---------~~~~-~~~H~~~V~~ 316 (357)
T 4g56_B 259 PDS-----------AQTS-AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---------EVFR-DLSHRDFVTG 316 (357)
T ss_dssp GGG-----------CEEE-CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---------EEEE-ECCCSSCEEE
T ss_pred CcE-----------eEEE-eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---------cEeE-ECCCCCCEEE
Confidence 321 1222 2467789999999864 6899999999999965432 2222 3479999999
Q ss_pred EEecCCCcceEEEecCCCeEEEEeecc
Q 018675 324 VQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 324 ~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
++|+|.+..+|+|+|.||+|++|++..
T Consensus 317 vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 317 VAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 999994335789999999999999854
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.8e-41 Score=321.08 Aligned_cols=304 Identities=22% Similarity=0.328 Sum_probs=233.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeee--eeecceecceEEEEECCCCCEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA--VLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l 89 (352)
+.+.++.+|.+.|++++|+|+ +++|||++.|++|++|+..++........ .....|...|.+++|+|+|++|
T Consensus 181 ~~~~~l~~H~~~V~~v~fspd------g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l 254 (611)
T 1nr0_A 181 KFKSTFGEHTKFVHSVRYNPD------GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI 254 (611)
T ss_dssp EEEEEECCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEE
T ss_pred eEeeeeccccCceEEEEECCC------CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEE
Confidence 445678999999999999997 57999999999999999877653322110 0011589999999999999999
Q ss_pred EEEeCCCcEEEEEccCCcee-----------------------------------------eeEeeccccCCeeEEEECC
Q 018675 90 ATASFDATTCIWEDVGGDYE-----------------------------------------CVATLEGHENEVKSVSWNA 128 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~-----------------------------------------~~~~~~~h~~~v~~v~~~~ 128 (352)
++++.|++|++||..+++.. +...+.+|...|++++|+|
T Consensus 255 ~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp 334 (611)
T 1nr0_A 255 ASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA 334 (611)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC
Confidence 99999999999997654321 1234568999999999999
Q ss_pred CCcEEEEeeCCCcEEEEecCCCCeeEE-----------------------------------------------------
Q 018675 129 SGTLLATCGRDKSVWIWEVMPGNEFEC----------------------------------------------------- 155 (352)
Q Consensus 129 ~~~~l~s~~~d~~v~vwd~~~~~~~~~----------------------------------------------------- 155 (352)
++++|++++.|++|++||+..+.....
T Consensus 335 dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~ 414 (611)
T 1nr0_A 335 DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQP 414 (611)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCE
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCC
Confidence 999999999999999999864321000
Q ss_pred ---------------------------EEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeec
Q 018675 156 ---------------------------VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE 208 (352)
Q Consensus 156 ---------------------------~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 208 (352)
+..+ .|...+.+++|+|++++|++|+.|+.|++|++.... ......
T Consensus 415 ~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~---~~~~~~--- 487 (611)
T 1nr0_A 415 LGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS---VSEVKT--- 487 (611)
T ss_dssp EEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE---EEEEEE---
T ss_pred cEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc---eeeeec---
Confidence 0000 123457789999999999999999999999875421 111111
Q ss_pred cCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc-cccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecC
Q 018675 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGA 286 (352)
Q Consensus 209 ~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~ 286 (352)
.+|...|.+++|+|++++|++++.|++|++|++.. .+.... .....|...|.+++|+|++ +|++++
T Consensus 488 --~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~----------~~~~~H~~~V~~v~fspdg~~lasgs 555 (611)
T 1nr0_A 488 --IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT----------NSWTFHTAKVACVSWSPDNVRLATGS 555 (611)
T ss_dssp --EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC----------CCCCCCSSCEEEEEECTTSSEEEEEE
T ss_pred --cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeee----------eeeeecccceeEEEECCCCCEEEEEE
Confidence 36889999999999999999999999999998753 111100 0112377889999999986 799999
Q ss_pred CCCeEEEEEccCCccccCcccceeeeccccc-CcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 287 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 287 ~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.|+++++|+...... .+.....+| ...|++++|+|+++ |+|++.|++|++|++.
T Consensus 556 ~D~~v~lW~~~~~~~-------~~~~~~~~h~~~~v~~v~fs~d~~--l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 556 LDNSVIVWNMNKPSD-------HPIIIKGAHAMSSVNSVIWLNETT--IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TTSCEEEEETTCTTS-------CCEEETTSSTTSCEEEEEEEETTE--EEEEETTSCEEEEECC
T ss_pred CCCcEEEEECCCccc-------ccchhhccCcccCeeEEEEcCCCE--EEEecCCCCEEEEecc
Confidence 999999997643210 111335688 89999999999985 7899999999999984
No 17
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-41 Score=328.18 Aligned_cols=309 Identities=20% Similarity=0.375 Sum_probs=233.1
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
.....+++|.+.|++++|+|+. ..+|+|||.|++|++|++................|...|.+++|+|++++|++
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~-----~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s 447 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDN-----ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALS 447 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTC-----CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred chhhhcccCCceeEEEEecCCC-----CCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEE
Confidence 4445789999999999999864 46999999999999999876432211111122468999999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
|+.|++|++||..++ .+...+.+|...|.+++|+|++.+|++++.|++|++||+.............+|...|.+++|
T Consensus 448 gs~Dg~v~vwd~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 525 (694)
T 3dm0_A 448 GSWDGELRLWDLAAG--VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRF 525 (694)
T ss_dssp EETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEE
T ss_pred EeCCCcEEEEECCCC--cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEE
Confidence 999999999998776 345677899999999999999999999999999999997543221111122468888999999
Q ss_pred cCCC--CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc
Q 018675 172 HPTM--DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249 (352)
Q Consensus 172 ~~~~--~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (352)
+|++ ..+++++.|+.|++|++... .....+ .+|...|.+++|+|++.+|++|+.||.|++||++..+.
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~-----~~~~~~----~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~- 595 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNC-----KLRSTL----AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK- 595 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTC-----CEEEEE----CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE-
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCC-----cEEEEE----cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce-
Confidence 9986 58999999999999987643 222223 47999999999999999999999999999999864321
Q ss_pred cCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCccccee----------eecccccCc
Q 018675 250 SGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKML----------LKKEKAHDM 319 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~----------~~~~~~h~~ 319 (352)
...+ .+...+.+++|++++.+++++.++.+++|+.....+......... ......+..
T Consensus 596 ----------~~~~--~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (694)
T 3dm0_A 596 ----------LYSL--EANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVI 663 (694)
T ss_dssp ----------EECC--BCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCC
T ss_pred ----------EEEe--cCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeE
Confidence 1111 134568899999999877778888999998765432211000000 000012223
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+++++|+|+++ +|+||+.||+|+||++.+
T Consensus 664 ~~~~l~~spdg~-~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 664 YCTSLNWSADGS-TLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp CEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred EeeeEEEcCCCC-EEEEEcCCCeEEEEeccC
Confidence 588999999986 688999999999999864
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-40 Score=300.16 Aligned_cols=303 Identities=26% Similarity=0.380 Sum_probs=228.0
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeee-------------cceecceEEEEECCC
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLE-------------EMHTRTVRSCAWSPS 85 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~-------------~~h~~~v~~~~~s~~ 85 (352)
+|.+.|+|++|+|+ +++||+++ |+++++|+..++........... ..+...|++++|+|+
T Consensus 62 ~h~~~V~~v~fspd------g~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 62 DHTSVVCCVKFSND------GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp ECSSCCCEEEECTT------SSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CCCCEEEEEEECCC------CCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 69999999999997 57899875 78999999987654322211000 012235999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
|++|++|+.|++|++||..++ .....+.+|...|.+++|+|++++|++++.|++|++||+..+. +...+. +...
T Consensus 135 g~~l~s~~~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~-~~~~ 208 (393)
T 1erj_A 135 GKFLATGAEDRLIRIWDIENR--KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ---CSLTLS-IEDG 208 (393)
T ss_dssp SSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEE-CSSC
T ss_pred CCEEEEEcCCCeEEEEECCCC--cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe---eEEEEE-cCCC
Confidence 999999999999999998766 4566788999999999999999999999999999999997653 233333 5567
Q ss_pred eeEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeee---ccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 166 VKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS---ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 166 v~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~---~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
+.+++|+| ++.++++++.|+.|++|+..... ....+. ....+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 209 v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-----~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 209 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-----LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp EEEEEECSTTCCEEEEEETTSCEEEEETTTCC-----EEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 99999999 88999999999999999875432 122221 1224789999999999999999999999999999
Q ss_pred cCCccccccCCCC-ccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCc
Q 018675 242 GADITRMQSGDGY-ASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319 (352)
Q Consensus 242 d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 319 (352)
|++.......... ........+ ..|...+.++++++++ ++++++.|+.+++|+.... ..+....+|..
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~---------~~~~~l~~h~~ 353 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTY-IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG---------NPLLMLQGHRN 353 (393)
T ss_dssp EC---------------CEEEEE-ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC---------CEEEEEECCSS
T ss_pred ECCCCCCcccccCCCCCcceEEE-ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC---------eEEEEECCCCC
Confidence 9864321110000 000111122 2467789999999875 7999999999999976432 22344578999
Q ss_pred ceeEEEecC------CCcceEEEecCCCeEEEEeecc
Q 018675 320 DVNSVQWSP------GERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 320 ~i~~~~~sp------~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.|++++|+| ++ .+|+||+.||+|+||++..
T Consensus 354 ~v~~v~~~~~~~~~p~~-~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 354 SVISVAVANGSSLGPEY-NVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CEEEEEECSSCTTCTTC-EEEEEEETTSEEEEEEEEE
T ss_pred CEEEEEecCCcCcCCCC-CEEEEECCCCcEEECcccc
Confidence 999999986 44 4789999999999999864
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.8e-40 Score=308.89 Aligned_cols=283 Identities=34% Similarity=0.611 Sum_probs=235.3
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+..+.+|.+.|++++|+|+ ++++++++.|+++++|+...... ..+ ..|...|.+++|+|+++.|++
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~------~~~l~t~~~d~~i~~w~~~~~~~-----~~~-~~~~~~v~~~~~s~~g~~l~~ 361 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPD------GQTIASASDDKTVKLWNRNGQHL-----QTL-TGHSSSVWGVAFSPDGQTIAS 361 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTSCEE-----EEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred cEEEEEecCCCCeEEEEECCC------CCEEEEEeCCCeEEEEeCCCCee-----EEE-eCCCCCEEEEEECCCCCEEEE
Confidence 345678899999999999997 57999999999999999765421 111 357889999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
|+.|+.+++|+.. + .....+.+|...|++++|+|++++|++++.|++|++||.. + +.+..+.+|...|++++|
T Consensus 362 ~~~dg~v~~~~~~-~--~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~---~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 362 ASDDKTVKLWNRN-G--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp EETTSEEEEEETT-C--CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-C---CEEEEEECCSSCEEEEEE
T ss_pred EeCCCEEEEEcCC-C--CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-C---CEEEEecCCCCCeEEEEE
Confidence 9999999999853 3 3466778899999999999999999999999999999963 3 345677889999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
+|++.+|++++.|+.|++|+... .....+ .+|...|.+++|+|++++|++++.|+.|++|+...
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~~~------~~~~~~----~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~------ 498 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNRNG------QLLQTL----TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG------ 498 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEETTS------CEEEEE----ECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS------
T ss_pred CCCCCEEEEEcCCCEEEEEECCC------CEEEEE----cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC------
Confidence 99999999999999999998532 123333 36889999999999999999999999999998531
Q ss_pred CCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCC
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~ 330 (352)
+....+. .|...+.+++|+|++ +|++++.|+.+++|+... +.+....+|...|++++|+||+
T Consensus 499 ------~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~----------~~~~~~~~h~~~v~~~~fs~dg 561 (577)
T 2ymu_A 499 ------QLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----------QLLQTLTGHSSSVWGVAFSPDG 561 (577)
T ss_dssp ------CEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS----------CEEEEEECCSSCEEEEEECTTS
T ss_pred ------CEEEEEe-CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC----------CEEEEEcCCCCCEEEEEEcCCC
Confidence 1122232 467889999999976 799999999999996432 2344567999999999999998
Q ss_pred cceEEEecCCCeEEEEe
Q 018675 331 RRLLASASDDGMIKIWE 347 (352)
Q Consensus 331 ~~~l~s~~~Dg~i~iw~ 347 (352)
+ +|+|+|.|++|++||
T Consensus 562 ~-~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 562 Q-TIASASSDKTVKLWN 577 (577)
T ss_dssp S-CEEEEETTSCEEEEC
T ss_pred C-EEEEEeCCCEEEEeC
Confidence 7 578999999999997
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-39 Score=280.26 Aligned_cols=263 Identities=24% Similarity=0.434 Sum_probs=206.4
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CCEEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GKLLAT 91 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s 91 (352)
+..+.+|.+.|++++|+|+ +++||||+.|++|+||++..... .+...+ ..|..+|.+++|+|+ +++|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~------g~~las~s~D~~v~iw~~~~~~~--~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYY------GKRMATCSSDKTIKIFEVEGETH--KLIDTL-TGHEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp CEECCSCSSCEEEEEECTT------SSEEEEEETTSCEEEEEBCSSCB--CCCEEE-CCCSSCEEEEEECCGGGCSEEEE
T ss_pred ceeccCCcCceEEEEECCC------CCEEEEEeCCCEEEEEecCCCCc--EEEEEE-ccccCCeEEEEecCCCcCCEEEE
Confidence 4568899999999999997 57999999999999999864321 111222 458999999999874 899999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
|+.|++|++||..++.......+.+|...|++++|+|+ +.+|++++.|++|++||+....... ...+.+|...|.++
T Consensus 73 ~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSA 151 (297)
T ss_dssp EETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEE
T ss_pred EcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceE
Confidence 99999999999877654556677889999999999997 8899999999999999987543221 24567899999999
Q ss_pred EEcCC-------------CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC---CEEEEEe
Q 018675 170 QWHPT-------------MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG---DKLVSCS 233 (352)
Q Consensus 170 ~~~~~-------------~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~---~~l~s~~ 233 (352)
+|+|+ +.+|++|+.|+.|++|++.... ..+..... ..+|...|.+++|+|++ .+|++++
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~-~~~~~~~~----l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-QTYVLEST----LEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp EECCCC------------CCEEEEEETTSCEEEEEEETTT-TEEEEEEE----ECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred eecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC-ceEEEEEE----ecCCCCceEEEEECCCCCCceEEEEEE
Confidence 99997 4689999999999999876432 11212222 34799999999999984 8999999
Q ss_pred CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeec
Q 018675 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313 (352)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
.|++|++||++.... .+. ... ..
T Consensus 227 ~D~~v~iWd~~~~~~-------~~~-------------------------------------------------~~~-~~ 249 (297)
T 2pm7_B 227 QDRTCIIWTQDNEQG-------PWK-------------------------------------------------KTL-LK 249 (297)
T ss_dssp TTSCEEEEEESSTTS-------CCE-------------------------------------------------EEE-SS
T ss_pred CCCcEEEEEeCCCCC-------ccc-------------------------------------------------eee-ee
Confidence 999999998642100 000 000 01
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
...|...|.+++|+|+++ +||+++.||+|+||+..
T Consensus 250 ~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 250 EEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEEC
T ss_pred cccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEEC
Confidence 235778899999999986 68899999999999975
No 21
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.8e-39 Score=285.01 Aligned_cols=309 Identities=17% Similarity=0.260 Sum_probs=235.8
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA 96 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~ 96 (352)
+..|.+.|++++|+|+ +++|++++.|+.|++|+..+.+. .....+ ..|...|++++|+|++++|++++.|+
T Consensus 4 ~~~~~~~i~~~~~s~~------~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~dg 74 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKD------RTQIAICPNNHEVHIYEKSGNKW--VQVHEL-KEHNGQVTGVDWAPDSNRIVTCGTDR 74 (372)
T ss_dssp EESCSSCCCEEEECTT------SSEEEEECSSSEEEEEEEETTEE--EEEEEE-ECCSSCEEEEEEETTTTEEEEEETTS
T ss_pred ecccCCCeEEEEECCC------CCEEEEEeCCCEEEEEeCCCCcE--Eeeeee-cCCCCcccEEEEeCCCCEEEEEcCCC
Confidence 4469999999999997 57999999999999999877631 112222 35889999999999999999999999
Q ss_pred cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE-EeecCccCeeEEEEcCCC
Q 018675 97 TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS-VLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 97 ~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~ 175 (352)
.+++|+..+++......+..|...|.+++|+|++++|++++.|+.|++||+.......... ...+|...+.+++|+|++
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred eEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 9999998877655555667899999999999999999999999999999997665433333 335688899999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCC-------------CCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 176 DVLFSCSYDNTIKVWWAEDTDS-------------DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~~~~-------------~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
.++++++.|+.|++|++..... ........ ..+|...|.+++|+|++.+|++++.||.|++||
T Consensus 155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE----SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE----CCCCSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEe----cCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 9999999999999999642110 01122222 236888999999999999999999999999999
Q ss_pred CCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccC--Ccc--cc---------------
Q 018675 243 ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESK--DDL--ID--------------- 303 (352)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~--~~~--~~--------------- 303 (352)
++..+ ....+. .+...+.++.|++++.+++++.|+.+++|+... ... ..
T Consensus 231 ~~~~~-----------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (372)
T 1k8k_C 231 ADKKM-----------AVATLA-SETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTA 298 (372)
T ss_dssp GGGTT-----------EEEEEE-CSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CH
T ss_pred CCCCc-----------eeEEEc-cCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcch
Confidence 75321 222222 356679999999988665556999999998765 210 00
Q ss_pred -------Cccccee------eecccccCcceeEEEecCCCc---ceEEEecCCCeEEEEeecc
Q 018675 304 -------GPSYKML------LKKEKAHDMDVNSVQWSPGER---RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 304 -------~~~~~~~------~~~~~~h~~~i~~~~~sp~~~---~~l~s~~~Dg~i~iw~~~~ 350 (352)
....... .....+|...|++++|+|.+. .+|+|++.||.|++|++..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 299 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp HHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred hhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 0000000 112248999999999774442 4789999999999999854
No 22
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-39 Score=287.97 Aligned_cols=327 Identities=17% Similarity=0.322 Sum_probs=234.6
Q ss_pred ccceeeeeee-cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-
Q 018675 8 NYELREIQTL-EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS- 85 (352)
Q Consensus 8 ~~~~~~~~~~-~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~- 85 (352)
.+++.....+ ++|.+.|++++|+|... + ....+++++.|+.|++|+..+..............|...|++++|+|+
T Consensus 4 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~-~-~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 81 (366)
T 3k26_A 4 KYSFKCVNSLKEDHNQPLFGVQFNWHSK-E-GDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDS 81 (366)
T ss_dssp -CCCEEEEEEECTTCSCEEEEEECTTCC-T-TSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECT
T ss_pred eeEEEEEEEeecCCCCceEEEEEecccC-C-CCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCC
Confidence 4455555444 59999999999999410 0 024566666677999999986654333322222236678999999998
Q ss_pred ---CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEe--
Q 018675 86 ---GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVL-- 159 (352)
Q Consensus 86 ---~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-- 159 (352)
+++|++|+.|+.|++||..+++ .+..+.+|...|.+++|+| ++++|++++.|++|++||+..+. .+..+
T Consensus 82 ~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~ 156 (366)
T 3k26_A 82 NTSHPLLAVAGSRGIIRIINPITMQ--CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT---LVAIFGG 156 (366)
T ss_dssp TTCCEEEEEEETTCEEEEECTTTCC--EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE---EEEEECS
T ss_pred CCCCCEEEEecCCCEEEEEEchhce--EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe---EEEEecc
Confidence 6799999999999999987663 4667788999999999999 89999999999999999997654 33444
Q ss_pred -ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC-ce------------------eEeeeeccCCCCcccEEE
Q 018675 160 -QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN-WH------------------CVQTISESNNGHSSTIWA 219 (352)
Q Consensus 160 -~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~------------------~~~~~~~~~~~h~~~i~~ 219 (352)
.+|...|.+++|+|++..+++++.|+.|++|++....... .. ..........+|...|.+
T Consensus 157 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 157 VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 6799999999999999999999999999999876421000 00 000000112348899999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEcCCccccc--cCCCCc-cceeeEEeecccCcceEEEEecCC--c-eEEecCCCCeEEE
Q 018675 220 LSFNAKGDKLVSCSDDLTIKIWGADITRMQ--SGDGYA-SWRHLCTISGYHDRTIFSVHWSRE--G-IIASGAADDSVQF 293 (352)
Q Consensus 220 l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~--~-~~~s~~~d~~v~~ 293 (352)
++|+ +++|++++.||.|++||++..... ...... .......+ ..|...+..+.++++ + ++++++.|+.+++
T Consensus 237 ~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~v 313 (366)
T 3k26_A 237 VRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF-DYSQCDIWYMRFSMDFWQKMLALGNQVGKLYV 313 (366)
T ss_dssp EEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE-ECSSCCSSCCCCEECTTSSEEEEECTTSCEEE
T ss_pred EEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccc-cccCCcEEEEEEcCCCCCcEEEEEecCCcEEE
Confidence 9998 779999999999999997643210 000111 11122222 235666777777776 4 8899999999999
Q ss_pred EEccCCccccCcccceeeeccccc--CcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 294 FVESKDDLIDGPSYKMLLKKEKAH--DMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~h--~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|+....... ........+| ...|++++|+|+++ +|++++.||.|+|||+.+
T Consensus 314 wd~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 314 WDLEVEDPH-----KAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EECCSSSGG-----GCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred EECCCCCCc-----cccceEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEecC
Confidence 977543221 1122234455 79999999999986 688999999999999853
No 23
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.4e-38 Score=285.40 Aligned_cols=309 Identities=15% Similarity=0.172 Sum_probs=230.9
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-CCCEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLL 89 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l 89 (352)
.....++.+|.+.|++++|+|+. ..+|++|+.|++|++|++.+....... ....|...|.+++|+| ++++|
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~-----~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~l 134 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTH-----PTTVAVGSKGGDIILWDYDVQNKTSFI---QGMGPGDAITGMKFNQFNTNQL 134 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSC-----TTEEEEEEBTSCEEEEETTSTTCEEEE---CCCSTTCBEEEEEEETTEEEEE
T ss_pred cceEEeccCCCCCEEEEEECCCC-----CCEEEEEcCCCeEEEEeCCCcccceee---ecCCcCCceeEEEeCCCCCCEE
Confidence 35667889999999999999973 269999999999999999876532111 1124889999999999 78999
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
++++.|+.+++||..+..........+|...|.+++|+|++++|++++.|+.|++||+. + .++..+.+|...|.++
T Consensus 135 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~---~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 135 FVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-G---HEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-S---CEEEEEECSSSCEEEE
T ss_pred EEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-C---CEEEEeccCCCcEEEE
Confidence 99999999999998764433333334455889999999999999999999999999984 3 2456778899999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC-CCCEEEEEeCCCcEEEEcCCccc
Q 018675 170 QWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 170 ~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~-~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
+|+|++. ++++++.|+.|++|++...... ......+ +|...|.+++|+| ++.+|++++.|+.|++||++...
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~-----~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDK-NSYIAEM-----PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCST-TCEEEEE-----ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcc-cceEEEe-----cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 9999998 9999999999999998753211 1222222 4788999999999 99999999999999999986432
Q ss_pred ccc-CCCCc----cc-eeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeeccc--ccCc
Q 018675 248 MQS-GDGYA----SW-RHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK--AHDM 319 (352)
Q Consensus 248 ~~~-~~~~~----~~-~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~--~h~~ 319 (352)
... ..+.. .. .... ..-.....+..+.+++++.+ +++.|+.+++|+..... .+.... .|..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~---------~~~~l~~~~~~~ 353 (383)
T 3ei3_B 285 KPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGG---------LVHQLRDPNAAG 353 (383)
T ss_dssp SCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCC---------EEEEECBTTBCS
T ss_pred cccccccccccccccccceE-EeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCc---------eeeeecCCCCCc
Confidence 110 00000 00 0000 00001234556777787766 89999999999765322 122233 3667
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+..++|+|+++ +|++++ ||.|+||++..
T Consensus 354 ~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 354 IISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred eEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 788889999986 678887 99999999875
No 24
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.9e-40 Score=298.38 Aligned_cols=309 Identities=17% Similarity=0.197 Sum_probs=218.0
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-CCCEEEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLLATA 92 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~ 92 (352)
.....+|...|+|++|+|.+ +.+||+|+.||+|+|||+.++..... .....|...|++++|+| ++++|++|
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~-----~~~lasGs~dg~i~lWd~~~~~~~~~---~~~~gH~~~V~~l~f~p~~~~~l~s~ 183 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTH-----PSTVAVGSKGGDIMLWNFGIKDKPTF---IKGIGAGGSITGLKFNPLNTNQFYAS 183 (435)
T ss_dssp CCEEEECSSCEEEEEECSSC-----TTCEEEEETTSCEEEECSSCCSCCEE---ECCCSSSCCCCEEEECSSCTTEEEEE
T ss_pred cccCCCCCCCEEEEEEeCCC-----CCEEEEEeCCCEEEEEECCCCCceeE---EEccCCCCCEEEEEEeCCCCCEEEEE
Confidence 34567899999999999964 46899999999999999876543211 11235899999999998 68999999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
+.|++|++||..++..........+...+.+++|+|++.+|++|+.|++|++||+.. + .+..+.+|...|.+++|+
T Consensus 184 s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~---~~~~~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 184 SMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-K---ELWNLRMHKKKVTHVALN 259 (435)
T ss_dssp CSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-C---BCCCSBCCSSCEEEEEEC
T ss_pred eCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-c---eeEEEecccceEEeeeec
Confidence 999999999987654333333334455688999999999999999999999999853 2 245677899999999999
Q ss_pred CCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc-
Q 018675 173 PTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS- 250 (352)
Q Consensus 173 ~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~- 250 (352)
|++. ++++++.|+.|++||+....... .+ ....+|...|.+++|+|++.+|++++.||.|++||+.......
T Consensus 260 p~~~~~~~s~s~d~~v~iwd~~~~~~~~-----~~-~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 260 PCCDWFLATASVDQTVKIWDLRQVRGKA-----SF-LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp TTCSSEEEEEETTSBCCEEETTTCCSSS-----CC-SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred CCCceEEEEecCcceeeEEecccccccc-----eE-EEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE
Confidence 9876 78899999999999986543211 11 1224789999999999999999999999999999986432110
Q ss_pred CCCCc--cce---eeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeE
Q 018675 251 GDGYA--SWR---HLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323 (352)
Q Consensus 251 ~~~~~--~~~---~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 323 (352)
..... ... ...... ........+...+++ .++++..++.|++|+..... .+.....+|...|.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~--------~~~~l~~~~~~~v~s 404 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAW-HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK--------MMCQLYDPESSGISS 404 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEE-CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC--------EEEEECCSSCCCCCC
T ss_pred EecccccccccceeEEEEE-cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc--------EEEEEeCCCCCcEEE
Confidence 00000 000 000000 011222333333332 33344455679999654321 122234578888998
Q ss_pred E-EecCCCcceEEEecCCCeEEEEeeccC
Q 018675 324 V-QWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 324 ~-~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+ +|+|+++ +|++|+ |+.|+||+++.+
T Consensus 405 ~~~fspdg~-~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 405 LNEFNPMGD-TLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp EEEECTTSS-CEEEEC-SSEEEECCCC--
T ss_pred EEEECCCCC-EEEEEc-CCcEEEEECCcC
Confidence 8 6999986 677776 889999998754
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-37 Score=273.46 Aligned_cols=290 Identities=16% Similarity=0.255 Sum_probs=233.8
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
...+|.+.|++++|+|+ ++++++++ |+.|++|++.++.............|...|.+++|+|++++|++++.|
T Consensus 46 ~~~~h~~~v~~~~~~~~------~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 118 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNP------TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA 118 (337)
T ss_dssp EEECCSSCCCEEEECSS------SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred eeccCCCceEEEEEecC------CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 34489999999999997 57899988 999999998765422111111112477899999999999999999999
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 175 (352)
+.+++|+..+++......+..|...|.+++|+|++++|++++.|+.|++||+..+ +....+..|...+.+++|+|++
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTS
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---ceeeeeecccCceEEEEECCCC
Confidence 9999999887765566677889999999999999999999999999999998754 3456677899999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCc
Q 018675 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA 255 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (352)
..+++++.|+.|++|++... .....+ .+...+.+++|+|+++++++++.|+.|++||++....
T Consensus 196 ~~l~~~~~dg~i~~~d~~~~-----~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~------- 258 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLREG-----RQLQQH-----DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK------- 258 (337)
T ss_dssp SEEEEEETTSEEEEEETTTT-----EEEEEE-----ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-------
T ss_pred CEEEEEecCCcEEEEECCCC-----ceEeee-----cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-------
Confidence 99999999999999987643 222222 3567899999999999999999999999999763221
Q ss_pred cceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceE
Q 018675 256 SWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLL 334 (352)
Q Consensus 256 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l 334 (352)
.. ...|...+.++.|++++ ++++++.|+.+++|+...... + ....|...|++++|+|+++ +|
T Consensus 259 -----~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~--------~--~~~~~~~~v~~~~~s~~~~-~l 321 (337)
T 1gxr_A 259 -----YQ-LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS--------I--FQSKESSSVLSCDISVDDK-YI 321 (337)
T ss_dssp -----EE-ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE--------E--EEEECSSCEEEEEECTTSC-EE
T ss_pred -----EE-EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE--------E--EEecCCCcEEEEEECCCCC-EE
Confidence 11 12367789999999875 789999999999997654211 1 1235788999999999986 67
Q ss_pred EEecCCCeEEEEeec
Q 018675 335 ASASDDGMIKIWELA 349 (352)
Q Consensus 335 ~s~~~Dg~i~iw~~~ 349 (352)
++++.||.|++|++.
T Consensus 322 ~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 322 VTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEETTSCEEEEEEE
T ss_pred EEecCCCeEEEEEEe
Confidence 899999999999985
No 26
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.1e-40 Score=293.49 Aligned_cols=314 Identities=18% Similarity=0.302 Sum_probs=220.8
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
.+..|.+.|++++|+|+ +++|++++.|++|++|++.++. +.....+ ..|...|.+++|+|++++|++++.|
T Consensus 6 ~~~~~~~~v~~~~~s~~------g~~l~~~~~d~~i~iw~~~~~~--~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d 76 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQ------RTEFVTTTATNQVELYEQDGNG--WKHARTF-SDHDKIVTCVDWAPKSNRIVTCSQD 76 (377)
T ss_dssp EEEECSSCCSCCEECSS------SSEEECCCSSSCBCEEEEETTE--EEECCCB-CCCSSCEEEEEECTTTCCEEEEETT
T ss_pred eEecCCCcEEEEEECCC------CCEEEEecCCCEEEEEEccCCc--eEEEEEE-ecCCceEEEEEEeCCCCEEEEEeCC
Confidence 34457789999999997 5799999999999999997652 1112222 3588999999999999999999999
Q ss_pred CcEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec-CccCeeEEEEcC
Q 018675 96 ATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG-HAQDVKMVQWHP 173 (352)
Q Consensus 96 ~~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~ 173 (352)
+++++||..++. ..+...+.+|...|.+++|+|++++|++++.|++|++||+...........+.. |...|.+++|+|
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 156 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP 156 (377)
T ss_dssp SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT
T ss_pred CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC
Confidence 999999987654 335566778999999999999999999999999999999976543333455666 999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCC------ce---eEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDN------WH---CVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~------~~---~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
++.+|++++.|+.|++|++....... +. ......... +|...|.+++|+|++++|++++.||.|++||++
T Consensus 157 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 157 NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 99999999999999999975321100 00 011122222 789999999999999999999999999999976
Q ss_pred ccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCcc-----ccCccc-----------
Q 018675 245 ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDL-----IDGPSY----------- 307 (352)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~-----~~~~~~----------- 307 (352)
..... ......+ ..|...+.++.|++++ ++++++.++.+ +|....... .+....
T Consensus 236 ~~~~~-------~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T 3dwl_C 236 APEQP-------PRALITV-KLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTG 306 (377)
T ss_dssp STTSC-------EEECCCE-ECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBC
T ss_pred CCCCc-------ceeeEee-cCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccc
Confidence 43210 0001112 2366789999999987 55666555555 664432110 000000
Q ss_pred ---------------c------------eeeecccccCcceeEEEecCCCcc---eEEEecCCCeEEEEee
Q 018675 308 ---------------K------------MLLKKEKAHDMDVNSVQWSPGERR---LLASASDDGMIKIWEL 348 (352)
Q Consensus 308 ---------------~------------~~~~~~~~h~~~i~~~~~sp~~~~---~l~s~~~Dg~i~iw~~ 348 (352)
. ........|...|+++++.+.+.. .|+|+|.||.|+|||+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 307 EGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 000112349999999998765433 4889999999999985
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-39 Score=284.89 Aligned_cols=260 Identities=25% Similarity=0.467 Sum_probs=201.0
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEEEEEe
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLLATAS 93 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~ 93 (352)
.+.+|.+.|++++|+|+ +++|||||.|++|+||++.++... ....+ ..|...|.+++|+| ++++|++|+
T Consensus 8 ~~~~H~~~V~~v~~s~~------g~~lasgs~D~~v~lwd~~~~~~~--~~~~l-~gH~~~V~~v~~~~~~~~~~l~s~s 78 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYY------GTRLATCSSDRSVKIFDVRNGGQI--LIADL-RGHEGPVWQVAWAHPMYGNILASCS 78 (316)
T ss_dssp ------CCEEEEEECGG------GCEEEEEETTTEEEEEEEETTEEE--EEEEE-ECCSSCEEEEEECCGGGSSCEEEEE
T ss_pred ecccccCeEEEeeEcCC------CCEEEEEeCCCeEEEEEecCCCcE--EEEEE-cCCCccEEEEEeCCCCCCCEEEEEE
Confidence 46799999999999997 579999999999999998765321 11122 45899999999986 489999999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
.|++|++||..++.......+.+|...|++++|+|+ +.+|++|+.|++|++||+...........+.+|...+.++.|
T Consensus 79 ~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 79 YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEE
T ss_pred CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEE
Confidence 999999999877654556677899999999999997 789999999999999998765433334556788889999999
Q ss_pred cCC-----------------CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC----CEEE
Q 018675 172 HPT-----------------MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG----DKLV 230 (352)
Q Consensus 172 ~~~-----------------~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~----~~l~ 230 (352)
+|+ +.+|++|+.|+.|++|+.... ..+.... ...+|...|.+++|+|++ .+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~--~~~~~~~----~l~~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED--GQWKEEQ----KLEAHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT--SCEEEEE----CCBCCSSCEEEEECCCCSSCSCCEEE
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC--Cccceee----ecccCCCceEEEEecCCCCCCCceEE
Confidence 997 368999999999999987532 1122233 234799999999999986 7899
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCccccee
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKML 310 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~ 310 (352)
+++.|++|++|+++..... .+ .
T Consensus 233 s~s~D~~v~iw~~~~~~~~------~~----------------------------------------------------~ 254 (316)
T 3bg1_A 233 SCSQDGRVFIWTCDDASSN------TW----------------------------------------------------S 254 (316)
T ss_dssp EEETTCEEEEEECSSTTCC------CC----------------------------------------------------B
T ss_pred EEcCCCeEEEEEccCcccc------ch----------------------------------------------------h
Confidence 9999999999986421000 00 0
Q ss_pred eecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 311 LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 311 ~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
......|...|++++|+|+++ +|++++.||+|+||+..
T Consensus 255 ~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 255 PKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred hhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 001135678899999999986 68899999999999975
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.4e-37 Score=293.54 Aligned_cols=285 Identities=34% Similarity=0.599 Sum_probs=235.7
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
+.+..+.+|...|++++|+|+ ++.+++++.|+++++|+..... ...+ ..|...|.+++|+|+++.|++
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d------~~~l~~~~~d~~i~~w~~~~~~-----~~~~-~~h~~~v~~~~~~~~~~~l~t 320 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPD------GQTIASASDDKTVKLWNRNGQL-----LQTL-TGHSSSVWGVAFSPDGQTIAS 320 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTSCE-----EEEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred CEEEEEecCCCCEEEEEEcCC------CCEEEEEeCCCEEEEEeCCCcE-----EEEE-ecCCCCeEEEEECCCCCEEEE
Confidence 456678899999999999997 5789999999999999975421 1112 458899999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
++.|+++++|+..+. ....+.+|...|.+++|+|++++|++++.|+++++|+.. + +.+..+.+|...|++++|
T Consensus 321 ~~~d~~i~~w~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~---~~~~~~~~~~~~v~~~~~ 393 (577)
T 2ymu_A 321 ASDDKTVKLWNRNGQ---HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSSVRGVAF 393 (577)
T ss_dssp EETTSCEEEEETTSC---EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-C---CEEEEEECCSSCEEEEEE
T ss_pred EeCCCeEEEEeCCCC---eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-C---CEEEEecCCCCCeEEEEE
Confidence 999999999997543 345677899999999999999999999999999999953 3 345667889999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
+|++++|++++.|+.|++|+... .....+ .+|...|++++|+|++++|++++.|+.|++|+....
T Consensus 394 s~dg~~l~~~~~d~~v~~~~~~~------~~~~~~----~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~----- 458 (577)
T 2ymu_A 394 SPDGQTIASASDDKTVKLWNRNG------QLLQTL----TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ----- 458 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECTTC------CEEEEE----ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC-----
T ss_pred CCCCCEEEEEeCCCEEEEEeCCC------CEEEEe----cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC-----
Confidence 99999999999999999997422 223333 368899999999999999999999999999985321
Q ss_pred CCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCC
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~ 330 (352)
....+. .|...+.+++++|++ ++++++.|+.+++|+... ..+....+|...|++++|+|++
T Consensus 459 -------~~~~~~-~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~----------~~~~~~~~h~~~v~~l~~s~dg 520 (577)
T 2ymu_A 459 -------LLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----------QLLQTLTGHSSSVRGVAFSPDG 520 (577)
T ss_dssp -------EEEEEE-CCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS----------CEEEEEECCSSCEEEEEECTTS
T ss_pred -------EEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC----------CEEEEEeCCCCCEEEEEEcCCC
Confidence 112222 367789999999976 789999999999997432 2334567899999999999998
Q ss_pred cceEEEecCCCeEEEEeec
Q 018675 331 RRLLASASDDGMIKIWELA 349 (352)
Q Consensus 331 ~~~l~s~~~Dg~i~iw~~~ 349 (352)
+ +|++++.||.|+|||..
T Consensus 521 ~-~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 521 Q-TIASASDDKTVKLWNRN 538 (577)
T ss_dssp S-CEEEEETTSEEEEECTT
T ss_pred C-EEEEEECcCEEEEEeCC
Confidence 6 68899999999999964
No 29
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3e-38 Score=274.60 Aligned_cols=246 Identities=19% Similarity=0.307 Sum_probs=203.3
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
..|...|++++|+|++++|++|+.|+++++||..++ ..+..+..|..+|.+++|+|++++|++|+.|++|++||+..+
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 458899999999999999999999999999998766 346677889999999999999999999999999999999765
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC-CCCEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKL 229 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~-~~~~l 229 (352)
. ++..+.+|...|.+++|+|++.++++|+.|+.|++|++.... ..... ..+|...|.+++|+| ++.+|
T Consensus 88 ~---~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~----~~~~~----~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 88 E---KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----ALEQT----FEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp C---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT----EEEEE----ECCCCSCEEEEEECTTCTTEE
T ss_pred c---EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc----chhhh----hcccCCcEEEEEECCCCCCEE
Confidence 4 456788999999999999999999999999999999876431 12222 247999999999999 67899
Q ss_pred EEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC--C-ceEEecCCCCeEEEEEccCCccccCcc
Q 018675 230 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR--E-GIIASGAADDSVQFFVESKDDLIDGPS 306 (352)
Q Consensus 230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~~s~~~d~~v~~~~~~~~~~~~~~~ 306 (352)
++|+.|++|++||++.... ...+...+...+..+.+.+ + .++++++.|+++++|+....
T Consensus 157 ~sgs~D~~v~iwd~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~------- 218 (304)
T 2ynn_A 157 ASGCLDRTVKVWSLGQSTP-----------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK------- 218 (304)
T ss_dssp EEEETTSEEEEEETTCSSC-----------SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT-------
T ss_pred EEEeCCCeEEEEECCCCCc-----------cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC-------
Confidence 9999999999999753211 1122233455677777765 3 48999999999999976432
Q ss_pred cceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 307 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 307 ~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..+....+|...|++++|+|+++ +|+||+.||+|+|||+..
T Consensus 219 --~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 219 --SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSST 259 (304)
T ss_dssp --EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT
T ss_pred --ccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCC
Confidence 23445678999999999999986 688999999999999864
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-37 Score=273.48 Aligned_cols=294 Identities=19% Similarity=0.295 Sum_probs=232.7
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
....+|.+|.+.|++++|+|+ +++|++++.|+.|++|++.++..... + ..|...|.+++|+|++++|++
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~------~~~l~~~~~dg~i~vwd~~~~~~~~~----~-~~h~~~v~~~~~~~~~~~l~s 91 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKE------GDLLFSCSKDSSASVWYSLNGERLGT----L-DGHTGTIWSIDVDCFTKYCVT 91 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTT------SCEEEEEESSSCEEEEETTTCCEEEE----E-CCCSSCEEEEEECTTSSEEEE
T ss_pred cccEEEEEeeceEEEEEEcCC------CCEEEEEeCCCEEEEEeCCCchhhhh----h-hhcCCcEEEEEEcCCCCEEEE
Confidence 344578899999999999997 57999999999999999987653322 2 358899999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-----CcEEEEecCCCCeeE--------EEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPGNEFE--------CVSV 158 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~vwd~~~~~~~~--------~~~~ 158 (352)
++.|+.|++||..+++ +...+. +...|.+++|+|++.+|++++.+ +.|.+||+....... ....
T Consensus 92 ~~~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 92 GSADYSIKLWDVSNGQ--CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp EETTTEEEEEETTTCC--EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred EeCCCeEEEEECCCCc--EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 9999999999987764 344444 78899999999999999999999 999999986443211 1233
Q ss_pred eecCcc--CeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC
Q 018675 159 LQGHAQ--DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 159 ~~~h~~--~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
+..|.. .+.+++|+|++..+++++.|+.|++|++... ......+ ..|...|.+++|+|++.+|++++.||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~ 240 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN----YEYVDSI----DLHEKSISDMQFSPDLTYFITSSRDT 240 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT----TEEEEEE----ECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC----cEeEEEE----ecCCCceeEEEECCCCCEEEEecCCc
Confidence 445555 8999999999999999999999999987642 1223333 25788999999999999999999999
Q ss_pred cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCC--------------eEEEEEccCCcc
Q 018675 237 TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADD--------------SVQFFVESKDDL 301 (352)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~--------------~v~~~~~~~~~~ 301 (352)
.|++||++..+ ....+. +...+..+.+++++ ++++++.++ .+++|+....
T Consensus 241 ~i~v~d~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-- 305 (369)
T 3zwl_B 241 NSFLVDVSTLQ-----------VLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE-- 305 (369)
T ss_dssp EEEEEETTTCC-----------EEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC--
T ss_pred eEEEEECCCCc-----------eeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC--
Confidence 99999975322 122222 45678889999876 677777777 6777754332
Q ss_pred ccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 302 ~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..+....+|...|++++|+|+++ +|++++.||.|+||++..
T Consensus 306 -------~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 306 -------EEIGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp -------CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEECH
T ss_pred -------cchhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECcc
Confidence 22344568999999999999986 688999999999999864
No 31
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=277.63 Aligned_cols=308 Identities=15% Similarity=0.244 Sum_probs=231.4
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeC---CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC---CC
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSG---DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS---GK 87 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~---D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~---~~ 87 (352)
...+++|.+.|++++|+|+. ..++++++. |++|++|++.++... ......|...|.+++|+|+ ++
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~-----~~l~~~~s~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~ 81 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCS-----AKFVTMGNFARGTGVIQLYEIQHGDLK----LLREIEKAKPIKCGTFGATSLQQR 81 (357)
T ss_dssp EEEEEECSSCEEEEEECTTS-----SEEEEEEC--CCCEEEEEEEECSSSEE----EEEEEEESSCEEEEECTTCCTTTC
T ss_pred hhhccCCCCceEEEEEcCCC-----ceEEEecCccCCCcEEEEEeCCCCccc----ceeeecccCcEEEEEEcCCCCCCc
Confidence 34567899999999999973 246667766 999999999876432 1222358889999999998 69
Q ss_pred EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEE------CCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec
Q 018675 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW------NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~------~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 161 (352)
+|++|+.|+.+++|+..++. .+...+.+|...|.++.| +|++++|++++.|++|++||+..... .+..+..
T Consensus 82 ~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~ 158 (357)
T 3i2n_A 82 YLATGDFGGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD--PVANMEP 158 (357)
T ss_dssp CEEEEETTSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS--CSEEECC
T ss_pred eEEEecCCCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC--cceeccc
Confidence 99999999999999987654 245677899999999965 67899999999999999999976541 2233433
Q ss_pred Cc----cCeeEEE----EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC---CCCEEE
Q 018675 162 HA----QDVKMVQ----WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA---KGDKLV 230 (352)
Q Consensus 162 h~----~~v~~~~----~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~---~~~~l~ 230 (352)
|. ..+.++. |+|++.++++++.|+.|++|++.... .... ..|...|.+++|+| ++.+|+
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-----LRWE-----TNIKNGVCSLEFDRKDISMNKLV 228 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-----EEEE-----EECSSCEEEEEESCSSSSCCEEE
T ss_pred cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-----eeee-----cCCCCceEEEEcCCCCCCCCEEE
Confidence 33 3788888 67899999999999999999876532 1111 24678999999999 999999
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccC----
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDG---- 304 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~---- 304 (352)
+++.||.|++||++...... .........|...+.++.|++++ ++++++.|+.+++|+.........
T Consensus 229 ~~~~dg~i~i~d~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 229 ATSLEGKFHVFDMRTQHPTK-------GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp EEESTTEEEEEEEEEEETTT-------EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred EECCCCeEEEEeCcCCCccc-------ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 99999999999976432110 00001112467889999999976 699999999999998754221100
Q ss_pred ------cccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 305 ------PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 305 ------~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
......+....+|...|++++|+|+++.+++|++.||.|+||++.+
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 0011234556789999999999999976444899999999999975
No 32
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-37 Score=266.16 Aligned_cols=288 Identities=23% Similarity=0.299 Sum_probs=231.7
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
.....++.+|.+.|++++| |+ +.+|++++.||.|++|+..+.... .. ...|...|.+++|+|++++|+
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~------~~~l~s~~~dg~v~vw~~~~~~~~----~~-~~~~~~~v~~~~~~~~~~~l~ 75 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VD------DSKVASVSRDGTVRLWSKDDQWLG----TV-VYTGQGFLNSVCYDSEKELLL 75 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EE------TTEEEEEETTSEEEEEEESSSEEE----EE-EEECSSCEEEEEEETTTTEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cC------CCEEEEEEcCCcEEEEECCCCEEE----EE-eecCCccEEEEEECCCCCEEE
Confidence 4677899999999999999 76 468999999999999999765322 11 234788999999999999999
Q ss_pred EEeCCCcEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 91 TASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
+++.|+.+++|+..... ......+.+|...|.++.| ++++|++++.|+.|++||. . .....+..|...+.++
T Consensus 76 ~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~--~---~~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 76 FGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE--G---SLVYNLQAHNASVWDA 148 (313)
T ss_dssp EEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET--T---EEEEEEECCSSCEEEE
T ss_pred EecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC--C---cEEEecccCCCceeEE
Confidence 99999999999875432 2345667889999999999 5679999999999999992 2 3456677899999999
Q ss_pred EEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccc
Q 018675 170 QWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248 (352)
Q Consensus 170 ~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (352)
.|+| ++..+++++.|+.|++|+.. .....+. ..|...|.+++|+|++. +++++.||.|++||++..+
T Consensus 149 ~~~~~~~~~l~~~~~d~~i~i~d~~-------~~~~~~~---~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~- 216 (313)
T 3odt_A 149 KVVSFSENKFLTASADKTIKLWQND-------KVIKTFS---GIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD- 216 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETT-------EEEEEEC---SSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC-
T ss_pred EEccCCCCEEEEEECCCCEEEEecC-------ceEEEEe---ccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh-
Confidence 9988 88999999999999999732 1222221 23788999999999998 9999999999999975321
Q ss_pred ccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecC
Q 018675 249 QSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 328 (352)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 328 (352)
....+. .|...+.++.+++++.+++++.|+.+++|+.... ........|...|++++|+|
T Consensus 217 ----------~~~~~~-~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~---------~~~~~~~~~~~~i~~~~~~~ 276 (313)
T 3odt_A 217 ----------VLRTYE-GHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG---------SLKQVITLPAISIWSVDCMS 276 (313)
T ss_dssp ----------EEEEEE-CCSSCEEEEEECTTSCEEEEETTSEEEEECTTTC---------CEEEEEECSSSCEEEEEECT
T ss_pred ----------hhhhhh-cCCceEEEEEEecCCCEEEEecCCEEEEEECCCC---------ceeEEEeccCceEEEEEEcc
Confidence 222232 3677899999999999999999999999965432 22344567888999999999
Q ss_pred CCcceEEEecCCCeEEEEeeccC
Q 018675 329 GERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 329 ~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
+++ +++++.||.|++|++...
T Consensus 277 ~~~--~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 277 NGD--IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp TSC--EEEEETTSCEEEEESCGG
T ss_pred CCC--EEEEeCCCcEEEEeCCCC
Confidence 986 457999999999998753
No 33
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.4e-37 Score=277.41 Aligned_cols=305 Identities=15% Similarity=0.206 Sum_probs=231.2
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceee--eeeeeeecceecceEEEEECCC---
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW--NCKAVLEEMHTRTVRSCAWSPS--- 85 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~--~~~~~~~~~h~~~v~~~~~s~~--- 85 (352)
......+.+|.+.|++++|+| ++|++|+.|++|++|++.+..... .....+ ..|...|++++|+|+
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~--------~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~ 76 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN--------SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH-FVHKSGLHHVDVLQAIER 76 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS--------SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE-ECCTTCEEEEEEEEEEET
T ss_pred hhhhhhhhhhhcCeEEEEecC--------CeEEEEcCCCEEEEEECCCcccccCCCcceEE-ecCCCcEEEEEEeccccc
Confidence 355678899999999999988 389999999999999998764100 011112 358899999999999
Q ss_pred -C---CEEEEEeCCCcEEEEEccCCce---eeeEeeccc-----cCCeeEEEEC----CCCcE-EEEeeCCCcEEEEecC
Q 018675 86 -G---KLLATASFDATTCIWEDVGGDY---ECVATLEGH-----ENEVKSVSWN----ASGTL-LATCGRDKSVWIWEVM 148 (352)
Q Consensus 86 -~---~~l~s~~~d~~i~i~~~~~~~~---~~~~~~~~h-----~~~v~~v~~~----~~~~~-l~s~~~d~~v~vwd~~ 148 (352)
+ ++|++++.|+.|++|+..++.. .....+..| ...|.+++|+ |++++ |++++.|+.|++||+.
T Consensus 77 ~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 156 (397)
T 1sq9_A 77 DAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH 156 (397)
T ss_dssp TTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEE
T ss_pred CCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCC
Confidence 9 9999999999999999876531 114566777 5899999999 99999 9999999999999987
Q ss_pred C------CCeeE--EEEEe-------ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCC
Q 018675 149 P------GNEFE--CVSVL-------QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGH 213 (352)
Q Consensus 149 ~------~~~~~--~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h 213 (352)
. ..... ....+ ..|...+.+++|+|++ .+++++.|+.|++|++... .....+.. ..+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~-----~~~~~~~~-~~~h 229 (397)
T 1sq9_A 157 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL-----RPLYNFES-QHSM 229 (397)
T ss_dssp SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT-----EEEEEEEC-CC--
T ss_pred ccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC-----ceeEEEec-cccc
Confidence 6 33221 11133 3478889999999999 9999999999999987642 23333321 1127
Q ss_pred ---cccEEEEEEcCCCCEEEEEeCC---CcEEEEcCCccccccCCCCccceeeEEeec------------ccCcceEEEE
Q 018675 214 ---SSTIWALSFNAKGDKLVSCSDD---LTIKIWGADITRMQSGDGYASWRHLCTISG------------YHDRTIFSVH 275 (352)
Q Consensus 214 ---~~~i~~l~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~i~~~~ 275 (352)
...|.+++|+|++.+|++++.| |.|++||++..+ ....+.. .|...+.++.
T Consensus 230 ~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 230 INNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE-----------RIGSLSVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp -CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC-----------EEEEECBC--------CCBSBSSCEEEEE
T ss_pred cccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc-----------ccceeccCcccccccccccccCCcEEEEE
Confidence 8899999999999999999999 999999986322 1122221 1677899999
Q ss_pred ecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeeccc------cc---------------CcceeEEEecCCCc--
Q 018675 276 WSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEK------AH---------------DMDVNSVQWSPGER-- 331 (352)
Q Consensus 276 ~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~------~h---------------~~~i~~~~~sp~~~-- 331 (352)
|++++ ++++++.|+.+++|+...... +.... +| ...|++++|+|+++
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~ 369 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKTKER---------ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 369 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEE---------EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSB
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCce---------eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccc
Confidence 99865 899999999999997654321 12222 45 89999999999973
Q ss_pred -------ceEEEecCCCeEEEEeeccC
Q 018675 332 -------RLLASASDDGMIKIWELANT 351 (352)
Q Consensus 332 -------~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.+|++++.||.|++|++..+
T Consensus 370 ~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 370 GMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp STTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccccccceEEEecCCCcEEEEEcCCC
Confidence 47889999999999999764
No 34
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-38 Score=294.72 Aligned_cols=304 Identities=12% Similarity=0.134 Sum_probs=210.5
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee----eee--eeeeecceecceEEEEECCCCCE
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF----WNC--KAVLEEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~----~~~--~~~~~~~h~~~v~~~~~s~~~~~ 88 (352)
.++.+|.+.|++++|+|.....+.+.+|||+|.|++|++|++..+... ... .......|...|++++|+|+ ..
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce
Confidence 456788999999999996211122579999999999999998765311 000 00112357889999999986 48
Q ss_pred EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEE--EECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc-
Q 018675 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSV--SWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ- 164 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v--~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~- 164 (352)
|++|+.||+|++||..++. .+...+.+|.+.|+++ .|+|++ .+|+||+.|++|++||++.... ...+.+|..
T Consensus 280 lasgs~DgtV~lWD~~~~~-~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~---~~~~~~~~~~ 355 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPE-VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT---TKTTVSRFRG 355 (524)
T ss_dssp EEEEETTSEEEEEETTBCS-SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH---HCEEEEECSC
T ss_pred EEEEeCCCEEEEEECCCCC-CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc---cccccccccc
Confidence 9999999999999987653 2345678999999999 568887 8999999999999999875432 223444543
Q ss_pred -CeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 165 -DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 165 -~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
.+.+++|+|++..+++++.|+.|++|++.... +..++. +|...|++|+|+|++++|++|+.||+|++|+.
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~-----~~~~l~----gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF-----AVHPLV----SRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSSEEEEEETTCTT-----CCEEEE----ECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred CcccceEeCCCcCeEEEeCCCCcEEEEECcccc-----cceeee----cCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 47899999999999999999999999876532 222332 68999999999999999999999999999986
Q ss_pred CccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeE
Q 018675 244 DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS 323 (352)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 323 (352)
....... + +... .......++++++++++.++....+-.+..|. ..........+|...|++
T Consensus 427 ~~~~~~~---~---~~~~--~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~----------~~g~~~~~l~gh~~~V~~ 488 (524)
T 2j04_B 427 ARRLLHG---I---KNSS--ATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLT----------VNDVSKAKIDAHGINITC 488 (524)
T ss_dssp CSSTTTC---C-----------CCCCEEEECBCCSSSCEEEECCCCCCCC-----------------------CCCSCCC
T ss_pred hHhhccc---c---ccCc--cceeeeEEEEeccCCCCCeEEccCCceecccc----------cCCcceeeecCCCceEEE
Confidence 4321110 0 0000 00011235677777766433222211111111 011233456789999999
Q ss_pred EEecCCCc--ceEEEecCCCeEEEEeecc
Q 018675 324 VQWSPGER--RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 324 ~~~sp~~~--~~l~s~~~Dg~i~iw~~~~ 350 (352)
++|+|++. .++|+|+.||+||||++..
T Consensus 489 Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 489 TKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp EEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred EECCCCCCccHHHHhhccCceEEEEEccc
Confidence 99999863 4789999999999999865
No 35
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=272.80 Aligned_cols=246 Identities=17% Similarity=0.282 Sum_probs=195.4
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
|...|++++|+|+ ..|++|+.||+|+|||+.+++....... ....|...|++++|+|+|++|++|+.|++|+
T Consensus 81 ~~~~v~~~~~s~d-------~~l~~~s~dg~v~lWd~~~~~~~~~~~~-~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~ 152 (344)
T 4gqb_B 81 TEAGVADLTWVGE-------RGILVASDSGAVELWELDENETLIVSKF-CKYEHDDIVSTVSVLSSGTQAVSGSKDICIK 152 (344)
T ss_dssp ESSCEEEEEEETT-------TEEEEEETTSEEEEEEECTTSSCEEEEE-EEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cCCCEEEEEEeCC-------CeEEEEECCCEEEEEeccCCCceeEeec-cccCCCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 5678999999996 3689999999999999987764433222 2246899999999999999999999999999
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCC-CCE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPT-MDV 177 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~ 177 (352)
+||..++ .++..+.+|.+.|++++|+|++. +|++++.|++|++||++.++....+ ....|...+.+++|+|+ +.+
T Consensus 153 iwd~~~~--~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~ 229 (344)
T 4gqb_B 153 VWDLAQQ--VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI-GCSAPGYLPTSLAWHPQQSEV 229 (344)
T ss_dssp EEETTTT--EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC-C----CCCEEEEEECSSCTTE
T ss_pred EEECCCC--cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee-ecceeeccceeeeecCCCCcc
Confidence 9998776 45778899999999999999874 7899999999999999766543221 12345557899999995 568
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEcCCccccccCCCCcc
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGADITRMQSGDGYAS 256 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 256 (352)
+++|+.|+.|++||+.... ++.++ .+|...|++++|+|++ .+|++|+.|++|+|||++..+.
T Consensus 230 l~sg~~dg~v~~wd~~~~~-----~~~~~----~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-------- 292 (344)
T 4gqb_B 230 FVFGDENGTVSLVDTKSTS-----CVLSS----AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-------- 292 (344)
T ss_dssp EEEEETTSEEEEEESCC-------CCEEE----ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE--------
T ss_pred eEEeccCCcEEEEECCCCc-----EEEEE----cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE--------
Confidence 8999999999999876432 23333 3789999999999997 5799999999999999754321
Q ss_pred ceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccC
Q 018675 257 WRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESK 298 (352)
Q Consensus 257 ~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~ 298 (352)
..+ ..|...|.+++|+|++ ++++++.|++|++|....
T Consensus 293 ----~~~-~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 293 ----FRS-QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp ----EEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred ----EEE-cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 122 2478889999999865 578999999999997643
No 36
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=267.86 Aligned_cols=246 Identities=24% Similarity=0.403 Sum_probs=206.8
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
..+++||...|.+++|+|+ +++++|++.|++|++||+.+++.... + ..|...+.+++|+|++++|++|+
T Consensus 73 ~~~l~gh~~~v~~~~~~~~------~~~l~s~s~D~~i~lWd~~~~~~~~~----~-~~~~~~~~~~~~spdg~~l~~g~ 141 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHT------LPIAASSSLDAHIRLWDLENGKQIKS----I-DAGPVDAWTLAFSPDSQYLATGT 141 (321)
T ss_dssp EEEECCCSSCEEEEEECSS------SSEEEEEETTSEEEEEETTTTEEEEE----E-ECCTTCCCCEEECTTSSEEEEEC
T ss_pred eeeeccCCCCEEEEEECCC------CCEEEEEeCCCcEEEEECCCCCEEEE----E-eCCCccEEEEEECCCCCEEEEEc
Confidence 4468999999999999997 47999999999999999987754322 2 23667889999999999999999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP 173 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 173 (352)
.|+.+++|+..++. ....+..|...|.+++|+|++++|++++.|++|++||+..+ +.+..+.+|...|.+++|+|
T Consensus 142 ~dg~v~i~~~~~~~--~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~sp 216 (321)
T 3ow8_A 142 HVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG---KLLHTLEGHAMPIRSLTFSP 216 (321)
T ss_dssp TTSEEEEEETTTCS--EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCCCEEEECT
T ss_pred CCCcEEEEEcCCCc--eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC---cEEEEEcccCCceeEEEEcC
Confidence 99999999987764 34566788889999999999999999999999999998755 35667889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCC
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG 253 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (352)
++.+|++++.|+.|++|++.... ....+ .+|...|.+++|+|++.+|++++.|++|++||++..
T Consensus 217 d~~~l~s~s~dg~i~iwd~~~~~-----~~~~~----~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~------- 280 (321)
T 3ow8_A 217 DSQLLVTASDDGYIKIYDVQHAN-----LAGTL----SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR------- 280 (321)
T ss_dssp TSCEEEEECTTSCEEEEETTTCC-----EEEEE----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-------
T ss_pred CCCEEEEEcCCCeEEEEECCCcc-----eeEEE----cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-------
Confidence 99999999999999999876432 22233 479999999999999999999999999999997532
Q ss_pred CccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 254 YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
.....+. .|...+.+++|++++ ++++++.|+.+++|+.
T Consensus 281 ----~~~~~~~-~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 281 ----TCVHTFF-DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp ----EEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred ----EEEEEEc-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 1222332 367789999999976 8999999999999964
No 37
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-37 Score=284.62 Aligned_cols=316 Identities=16% Similarity=0.183 Sum_probs=224.0
Q ss_pred eeeeee-cCCccceEEEEEcc-CCCCCCCccEEEEeeCCCeEEEEecCC---CceeeeeeeeeecceecceEEEEECCCC
Q 018675 12 REIQTL-EGHTDRVWSLAWKP-TAGVDGVAPVFASCSGDKTVRIWEQSA---SSRFWNCKAVLEEMHTRTVRSCAWSPSG 86 (352)
Q Consensus 12 ~~~~~~-~gH~~~V~~i~~~p-~~~~~~~~~~l~s~s~D~~v~~w~~~~---~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 86 (352)
..+.++ ++|.+.|++++|+| + +++|+||+.|++|++|++.+ +.. .. ......|...|++++|+|++
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~------~~~l~s~s~dg~v~vwd~~~~~~~~~-~~--~~~~~~h~~~v~~~~~~~~~ 123 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGE------TPYLITGSDQGVIKIWNLKEIIVGEV-YS--SSLTYDCSSTVTQITMIPNF 123 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSS------SCEEEEEETTSEEEEEEHHHHHTTCC-CS--CSEEEECSSCEEEEEECTTS
T ss_pred eEEeeeccCCCCceEEEEECCCC------CCEEEEecCCceEEEeECcccccCcc-cc--eeeeccCCCCEEEEEEeCCC
Confidence 456777 89999999999999 5 57999999999999999865 221 11 11222488999999999999
Q ss_pred CEEEEEeCCCcEEEEEcc---CCcee------eeEeec--c--ccCCeeEEE--ECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 87 KLLATASFDATTCIWEDV---GGDYE------CVATLE--G--HENEVKSVS--WNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 87 ~~l~s~~~d~~i~i~~~~---~~~~~------~~~~~~--~--h~~~v~~v~--~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
++|++|+.|++|++||.. .++.. .+..+. . +...+.++. +++++.+|++++.|++|++||+....
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 999999999999999874 33211 111111 1 456677777 56889999999999999999997654
Q ss_pred eeEEEEEeec--CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc----CC
Q 018675 152 EFECVSVLQG--HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN----AK 225 (352)
Q Consensus 152 ~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~----~~ 225 (352)
++..+.+ |...|++++|+|++.+|++++.|+.|++|++... .+...+. .+|...|.+++|+ |+
T Consensus 204 ---~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~---~~~~~~v~~~~~~~~~s~~ 272 (437)
T 3gre_A 204 ---RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN-----VLIRSWS---FGDHAPITHVEVCQFYGKN 272 (437)
T ss_dssp ---EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT-----EEEEEEB---CTTCEEEEEEEECTTTCTT
T ss_pred ---eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc-----cEEEEEe---cCCCCceEEEEeccccCCC
Confidence 3555666 8889999999999999999999999999987642 2333321 2567789999665 46
Q ss_pred CCEEEEEeCCCcEEEEcCCccccc-cCCCCc------cceeeE------Eee-cccCcceEEEEecCCceEEecCCCCeE
Q 018675 226 GDKLVSCSDDLTIKIWGADITRMQ-SGDGYA------SWRHLC------TIS-GYHDRTIFSVHWSREGIIASGAADDSV 291 (352)
Q Consensus 226 ~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~------~~~~~~------~~~-~~~~~~i~~~~~~~~~~~~s~~~d~~v 291 (352)
+.+|++|+.||.|++||++..+.. ...+.. .+.+.. .+. ..|...+.+++++++.++++++.|+.+
T Consensus 273 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i 352 (437)
T 3gre_A 273 SVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSI 352 (437)
T ss_dssp EEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEE
T ss_pred ccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeE
Confidence 779999999999999998643211 000000 000000 001 125667888999966789999999999
Q ss_pred EEEEccCCccccCccc----------------------------ceeeecccccCcceeEEEecCC-CcceEEEecCCCe
Q 018675 292 QFFVESKDDLIDGPSY----------------------------KMLLKKEKAHDMDVNSVQWSPG-ERRLLASASDDGM 342 (352)
Q Consensus 292 ~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~h~~~i~~~~~sp~-~~~~l~s~~~Dg~ 342 (352)
++|+............ .........|...|++++|+++ +..+|+||+.||.
T Consensus 353 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 353 VMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp EEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred EEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCce
Confidence 9998754322110000 0000112349999999999987 2458999999999
Q ss_pred EEEEe
Q 018675 343 IKIWE 347 (352)
Q Consensus 343 i~iw~ 347 (352)
|+||+
T Consensus 433 I~iw~ 437 (437)
T 3gre_A 433 IGIFQ 437 (437)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99995
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.3e-37 Score=276.98 Aligned_cols=298 Identities=13% Similarity=0.180 Sum_probs=223.9
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCc
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
.+| ..+....|+|+ +.+|++++.|+.|++|++.++.. .. ....|...|++++|+|++++|++|+.|+.
T Consensus 95 ~~~-~~~~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~----~~-~~~~h~~~v~~~~~~~~~~~l~s~s~d~~ 162 (420)
T 3vl1_A 95 KRA-DYTAVDTAKLQ------MRRFILGTTEGDIKVLDSNFNLQ----RE-IDQAHVSEITKLKFFPSGEALISSSQDMQ 162 (420)
T ss_dssp CSC-CEEEEEEECSS------SCEEEEEETTSCEEEECTTSCEE----EE-ETTSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ecC-CceEEEEEecC------CCEEEEEECCCCEEEEeCCCcce----ee-ecccccCccEEEEECCCCCEEEEEeCCCe
Confidence 344 33444466775 57899999999999999876532 11 22458899999999999999999999999
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec---Cc-----------
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG---HA----------- 163 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~---h~----------- 163 (352)
|++||..+++ ....+.+|...|.+++|+|++.+|++++.|++|++||+..+.. +..+.. |.
T Consensus 163 i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~~~v~~~~~~~~ 237 (420)
T 3vl1_A 163 LKIWSVKDGS--NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT---IHTFNRKENPHDGVNSIALFVG 237 (420)
T ss_dssp EEEEETTTCC--CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE---EEEECBTTBTTCCEEEEEEEEC
T ss_pred EEEEeCCCCc--CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce---eEEeecCCCCCCCccEEEEecC
Confidence 9999987663 4567789999999999999999999999999999999976543 333432 33
Q ss_pred ----------cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEE
Q 018675 164 ----------QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSC 232 (352)
Q Consensus 164 ----------~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~ 232 (352)
..+.+++|+|++.++++++.|+.|++|++.... ....+ ..+|...|.+++|+|++. +|++|
T Consensus 238 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~---~~~~~~~v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE-----QTIQL---PSKFTCSCNSLTVDGNNANYIYAG 309 (420)
T ss_dssp CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC-----EEEEE---CCTTSSCEEEEEECSSCTTEEEEE
T ss_pred CcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc-----eeEEc---ccccCCCceeEEEeCCCCCEEEEE
Confidence 334445567889999999999999999876532 12222 236788999999999998 99999
Q ss_pred eCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeee
Q 018675 233 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 312 (352)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 312 (352)
+.||.|++||++.... ....+...+...+..+.+.++.++++++.|+.+++|+.................
T Consensus 310 ~~dg~i~vwd~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 379 (420)
T 3vl1_A 310 YENGMLAQWDLRSPEC----------PVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPT 379 (420)
T ss_dssp ETTSEEEEEETTCTTS----------CSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCE
T ss_pred eCCCeEEEEEcCCCcC----------chhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCcc
Confidence 9999999999863211 123334446777888888777799999999999999865422111100001111
Q ss_pred cccccCcceeEEEecCCCc---ceEEEecCCCeEEEEeeccC
Q 018675 313 KEKAHDMDVNSVQWSPGER---RLLASASDDGMIKIWELANT 351 (352)
Q Consensus 313 ~~~~h~~~i~~~~~sp~~~---~~l~s~~~Dg~i~iw~~~~~ 351 (352)
...+|...|.+++|+|+++ .++ ++|.+|.+++|+++++
T Consensus 380 ~~~~~~~~v~~~~~s~~~~~~g~l~-a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 380 FLVSNDDAVSQFCYVSDDESNGEVL-EVGKNNFCALYNLSNP 420 (420)
T ss_dssp EECCSSCCCCEEEEECCSSSSCEEE-EEETTTEEEEEESCC-
T ss_pred EEccCCcceEEEEEccCCCCcceEE-EEcCCceEEEEeccCC
Confidence 2457889999999999987 555 5667999999999864
No 39
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.4e-37 Score=276.21 Aligned_cols=244 Identities=30% Similarity=0.558 Sum_probs=205.4
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
..|..+|++++|+|++++|++|+.|++|++||..+++ ....+.+|.+.|++++|+|++++|++|+.|++|++||+...
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 4588999999999999999999999999999987764 45678899999999999999999999999999999998654
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
.++..+.+|...|.+++|+|++.++++++.|+.|++|++... .+..++ .+|...|.++.++|++.+|+
T Consensus 183 ---~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~-----~~~~~~----~~h~~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 183 ---ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-----YCVKTF----TGHREWVRMVRPNQDGTLIA 250 (410)
T ss_dssp ---CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-----CEEEEE----ECCSSCEEEEEECTTSSEEE
T ss_pred ---ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-----cEEEEE----eCCCccEEEEEECCCCCEEE
Confidence 356778899999999999999999999999999999987643 233443 36889999999999999999
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCC---------------------ceEEecCCCC
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSRE---------------------GIIASGAADD 289 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------------------~~~~s~~~d~ 289 (352)
+|+.|+.|++||++.... ...+ ..|...+.++.|+|+ .++++++.|+
T Consensus 251 s~s~D~~v~vwd~~~~~~-----------~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKEC-----------KAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp EEETTSCEEEEETTTCCE-----------EEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred EEcCCCeEEEEECCCCce-----------eeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 999999999999753221 1122 236677888888873 4799999999
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+++|+.... ..+....+|...|++++|+|+++ +|+||+.||+|+|||+..
T Consensus 319 ~i~iwd~~~~---------~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 319 TIKMWDVSTG---------MCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKN 369 (410)
T ss_dssp EEEEEETTTT---------EEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTT
T ss_pred eEEEEECCCC---------ceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Confidence 9999976432 23345578999999999999986 678999999999999864
No 40
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-36 Score=263.16 Aligned_cols=263 Identities=32% Similarity=0.571 Sum_probs=196.2
Q ss_pred eeee-cC-CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce---eeeeeeeeecceecceEEEEECCCCCE
Q 018675 14 IQTL-EG-HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR---FWNCKAVLEEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 14 ~~~~-~g-H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~~~~~ 88 (352)
+..+ .+ |.+.|++++|+|+ +++|++|+.|++|++|+...... ...+... ...|...|++++|+|+|++
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~------~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~sp~g~~ 121 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPH------TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAI-IEGHENEVKGVAWSNDGYY 121 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTT------SSEEEEEETTSCEEEEEC-------CCCEEEEE-EC----CEEEEEECTTSCE
T ss_pred EEEEecCCccCCEEEEEECCC------CCEEEEEeCCCcEEEEEcccCcCccccceeEEE-EcCCCCcEEEEEECCCCCE
Confidence 3445 44 9999999999997 57999999999999999853211 0111122 2458899999999999999
Q ss_pred EEEEeCCCcEEEEEccCC--ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 89 LATASFDATTCIWEDVGG--DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~--~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
|++|+.|++|++||.... ...++..+.+|...|++++|+|++.+|++++.|++|++||+..+ ...++..+.+|...|
T Consensus 122 las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~-~~~~~~~~~~h~~~v 200 (330)
T 2hes_X 122 LATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD-DWECVAVLNGHEGTV 200 (330)
T ss_dssp EEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCE
T ss_pred EEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-CeeEEEEccCCCCcE
Confidence 999999999999997432 23456778899999999999999999999999999999997643 335677888999999
Q ss_pred eEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCC---CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 167 KMVQWHPT--MDVLFSCSYDNTIKVWWAEDTDSD---NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 167 ~~~~~~~~--~~~l~s~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
.+++|+|+ +..|++++.|+.|++|++...... .+.+...+ ...|...|.+++|++++ +|++++.||.|++|
T Consensus 201 ~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~---~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw 276 (330)
T 2hes_X 201 WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAIL---PDVHKRQVYNVAWGFNG-LIASVGADGVLAVY 276 (330)
T ss_dssp EEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEEC---CSCCSSCEEEEEECTTS-CEEEEETTSCEEEE
T ss_pred EEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeec---ccccccceEEEEEcCCC-EEEEEeCCCEEEEE
Confidence 99999998 678999999999999987543211 11222222 22488999999999765 79999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCc-ceEEEEecC--C-ceEEecCCCCeEEEEEcc
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDR-TIFSVHWSR--E-GIIASGAADDSVQFFVES 297 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~--~-~~~~s~~~d~~v~~~~~~ 297 (352)
+.... .++........|.. .+.+++|++ + .+|++++.|+++++|+..
T Consensus 277 ~~~~~---------~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 277 EEVDG---------EWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEETT---------EEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EcCCC---------ceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 86421 11222222223554 789999988 3 479999999999999653
No 41
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-36 Score=271.54 Aligned_cols=300 Identities=20% Similarity=0.360 Sum_probs=226.5
Q ss_pred cCCccceEEEEEccCCCCCCCcc-EEEEeeCCCeEEEEec----CCCceeeee------eeeeec-----ceecceEEEE
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAP-VFASCSGDKTVRIWEQ----SASSRFWNC------KAVLEE-----MHTRTVRSCA 81 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~-~l~s~s~D~~v~~w~~----~~~~~~~~~------~~~~~~-----~h~~~v~~~~ 81 (352)
..|.+.|++++|+|+ ++ +||+++.|+.|++|++ .++...+.. ...+.. .|...|++++
T Consensus 42 ~~~~~~v~~~~~s~~------~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPL------DESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp EEECSCCSEEEECSS------CTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred eeccCceEEEEECCC------CCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 356699999999997 46 9999999999999999 766532221 111111 1577999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE-------
Q 018675 82 WSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE------- 154 (352)
Q Consensus 82 ~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~------- 154 (352)
|+|++++|++|+.|+.+++|+. ++ .....+.+|...|.+++|+|++++|++++.|+.|++||+..+....
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWNK-TG--ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEET-TS--CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred EcCCCCEEEEEeCCCeEEEEeC-CC--CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 9999999999999999999983 33 3466778899999999999999999999999999999986443211
Q ss_pred ----------------------------------------------EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEE
Q 018675 155 ----------------------------------------------CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188 (352)
Q Consensus 155 ----------------------------------------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 188 (352)
.+..+..|...+.+++|+|++.+|++++.|+.|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLR 272 (425)
T ss_dssp -------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 1123446788899999999999999999999999
Q ss_pred EEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccC
Q 018675 189 VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHD 268 (352)
Q Consensus 189 iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (352)
+|++.... ....+ .+|...|.+++|+|++ ++++++.||.|++||++... ....+. .+.
T Consensus 273 i~d~~~~~-----~~~~~----~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~-----------~~~~~~-~~~ 330 (425)
T 1r5m_A 273 IWHGGNGN-----SQNCF----YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT-----------LLALSI-VDG 330 (425)
T ss_dssp EECSSSBS-----CSEEE----CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE-----------EEEEEE-CTT
T ss_pred EEECCCCc-----cceEe----cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc-----------EeEecc-cCC
Confidence 99875432 12222 3578899999999999 99999999999999975321 222222 356
Q ss_pred cceEEEEecCCc-eEEecCCCCeEEEEEccCCcccc-----------CcccceeeecccccCc--ceeEEEecCCCcceE
Q 018675 269 RTIFSVHWSREG-IIASGAADDSVQFFVESKDDLID-----------GPSYKMLLKKEKAHDM--DVNSVQWSPGERRLL 334 (352)
Q Consensus 269 ~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~h~~--~i~~~~~sp~~~~~l 334 (352)
..+.++.+++++ ++++++.|+.+++|+........ .......+....+|.. .|++++|+|+++ +|
T Consensus 331 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l 409 (425)
T 1r5m_A 331 VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN-KI 409 (425)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS-EE
T ss_pred ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc-eE
Confidence 789999999876 78999999999999765321000 0000113455677866 999999999986 67
Q ss_pred EEecCCCeEEEEeec
Q 018675 335 ASASDDGMIKIWELA 349 (352)
Q Consensus 335 ~s~~~Dg~i~iw~~~ 349 (352)
++++.||.|++|+++
T Consensus 410 ~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 410 SVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEESSSCCEEEECC
T ss_pred EEEecCceEEEEeec
Confidence 899999999999985
No 42
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-37 Score=282.03 Aligned_cols=299 Identities=20% Similarity=0.346 Sum_probs=231.6
Q ss_pred CccceEEEEEccCCCCCCCccEEEEe----------eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASC----------SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~----------s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
+...|++++|+|+. ..+|+++ +.|++|++|++.+.... .......|...|++++|+|++++|
T Consensus 11 ~~~~v~~~~~sp~g-----~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l 82 (416)
T 2pm9_A 11 EFSRTATFAWSHDK-----IPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE---KPIASLQVDSKFNDLDWSHNNKII 82 (416)
T ss_dssp EEEESCBCCBCSSS-----SCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC---SCSCCCCCSSCEEEEEECSSSSCE
T ss_pred hhhhcceEeeCCCC-----CCEEEEEecCcccccccCCCCeEEEEEccCCCCC---cEEEEEecCCceEEEEECCCCCeE
Confidence 44678999999973 2489999 89999999998765421 011112478899999999999999
Q ss_pred EEEeCCCcEEEEEccCC--ceeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCC------eeEEEEEee
Q 018675 90 ATASFDATTCIWEDVGG--DYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGN------EFECVSVLQ 160 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~--~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~------~~~~~~~~~ 160 (352)
++|+.|+.+++|+.... .......+.+|...|++++|+|+ +.+|++++.|++|++||+.... .........
T Consensus 83 ~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2pm9_A 83 AGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM 162 (416)
T ss_dssp EEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC
T ss_pred EEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc
Confidence 99999999999998651 12356778899999999999998 8899999999999999997654 222222346
Q ss_pred cCccCeeEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeec--cCCCCcccEEEEEEcCCC-CEEEEEeCCC
Q 018675 161 GHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE--SNNGHSSTIWALSFNAKG-DKLVSCSDDL 236 (352)
Q Consensus 161 ~h~~~v~~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~~~~h~~~i~~l~~~~~~-~~l~s~~~dg 236 (352)
.|...+.+++|+|+ +.++++++.|+.|++|++... .....+.. ...+|...|.+++|+|++ .++++++.|+
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK-----KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT-----EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC-----CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 78889999999998 789999999999999987653 22222221 122347899999999997 6899999999
Q ss_pred ---cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC-C-ceEEecCCCCeEEEEEccCCccccCcccceee
Q 018675 237 ---TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-E-GIIASGAADDSVQFFVESKDDLIDGPSYKMLL 311 (352)
Q Consensus 237 ---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~ 311 (352)
.|++||++.... ....+...|...+.+++|++ + .++++++.|+.+++|+.... ..+
T Consensus 238 ~~~~i~~~d~~~~~~----------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~---------~~~ 298 (416)
T 2pm9_A 238 NDPSILIWDLRNANT----------PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA---------EQL 298 (416)
T ss_dssp SSCCCCEEETTSTTS----------CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC---------CEE
T ss_pred CCceEEEEeCCCCCC----------CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC---------ccc
Confidence 999999864211 00111113667899999998 4 48999999999999965432 233
Q ss_pred ecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 312 KKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 312 ~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
....+|...|++++|+|+++.+|++++.||.|+||++..
T Consensus 299 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 445689999999999999856889999999999999865
No 43
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.8e-36 Score=265.54 Aligned_cols=304 Identities=21% Similarity=0.345 Sum_probs=210.1
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEEEEE
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLLATA 92 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~ 92 (352)
..+.||.+.|++++|+|+ +++|++++.|++|++|++.+..........+ ..|...|++++|+| ++++|++|
T Consensus 5 ~~~~gH~~~v~~~~~~~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFY------GRHVATCSSDQHIKVFKLDKDTSNWELSDSW-RAHDSSIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp CEECCCSSCEEEEEECSS------SSEEEEEETTSEEEEEEECSSSCCEEEEEEE-ECCSSCEEEEEECCGGGCSEEEEE
T ss_pred ccCcccccceeEEEEcCC------CCEEEEeeCCCeEEEEECCCCCCcceeccee-ccCCCcEEEEEEcCCCCCCEEEEE
Confidence 356899999999999997 5799999999999999998654333333222 35889999999999 69999999
Q ss_pred eCCCcEEEEEccCCce-------eeeEeeccccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEE---E--
Q 018675 93 SFDATTCIWEDVGGDY-------ECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVS---V-- 158 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~-------~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~---~-- 158 (352)
+.|+.|++||...+.. .+...+.+|...|.+++|+|+ +.+|++++.|++|++||+.......... .
T Consensus 78 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 78 SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 9999999999876432 446677889999999999999 9999999999999999987554221111 0
Q ss_pred -----eecCccCeeEEEEcCC---CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC----
Q 018675 159 -----LQGHAQDVKMVQWHPT---MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG---- 226 (352)
Q Consensus 159 -----~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~---- 226 (352)
...|...+.++.|+|+ +..+++++.++.+.+|+..... ..... ...+|...|.+++|+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~----~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK---LHVAA----KLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC---EEEEE----ECCCCCSCEEEEEECCCSSCSS
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc---eeeee----ecCCCCcceeEEEECCCCCCcc
Confidence 1257778999999997 8899999999999777543321 11222 234789999999999998
Q ss_pred CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCc
Q 018675 227 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGP 305 (352)
Q Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~ 305 (352)
.+|++|+.||.|++||++......... . .............. ....+..++....+. .+. ..
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~ 293 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSPLASE----E--------SLTNSNMFDNSADVDMDAQGRSDSNTEEKA----ELQ-SN 293 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC-------------------------------------------------------C-CS
T ss_pred eEEEEEcCCCeEEEEeCCCCcCccccC----C--------cccceeccCCCcccccccccccccccceee----eec-cc
Confidence 899999999999999976321110000 0 00001111111111 122222222111110 001 11
Q ss_pred ccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 306 SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 306 ~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.....+....+|...|++++|+|+++ +|+|++.||.|+||++..
T Consensus 294 ~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 294 LQVELLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp EEEEEEEEECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEECT
T ss_pred ccccEEEEEecccccEEEEEEcCCCC-EEEEecCCCcEEEEecCc
Confidence 12234455678999999999999986 688999999999999975
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-35 Score=269.47 Aligned_cols=283 Identities=23% Similarity=0.358 Sum_probs=216.4
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
.++.|+|++. .+||+| .|++|+|||..+++....+ ....|...|++++|+|+|++|++|+.|++|++||
T Consensus 107 y~~~l~wS~~-------n~lAvg-ld~tV~lWd~~tg~~~~~~---~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd 175 (420)
T 4gga_A 107 YLNLVDWSSG-------NVLAVA-LDNSVYLWSASSGDILQLL---QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWD 175 (420)
T ss_dssp TCBCEEECTT-------SEEEEE-ETTEEEEEETTTCCEEEEE---ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cceeEEECCC-------CEEEEE-eCCEEEEEECCCCCEEEEE---EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEE
Confidence 4567899874 467766 5999999999887532211 1134677899999999999999999999999999
Q ss_pred ccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe
Q 018675 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 103 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
..++ .++..+.+|...+.+++|+ +..|++|+.|+.+++||..... ..+..+.+|...+..+.++|++.++++++
T Consensus 176 ~~~~--~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~--~~~~~~~~h~~~~~~~~~~~~g~~l~s~~ 249 (420)
T 4gga_A 176 VQQQ--KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE--HHVATLSGHSQEVCGLRWAPDGRHLASGG 249 (420)
T ss_dssp TTTT--EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCC--cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc--eeeEEecccccceeeeeecCCCCeeeeee
Confidence 8776 4567788999999998875 5799999999999999986543 34567889999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEE--EeCCCcEEEEcCCccccccCCCCcccee
Q 018675 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVS--CSDDLTIKIWGADITRMQSGDGYASWRH 259 (352)
Q Consensus 183 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (352)
.|+.+++|+......... ... ....|...|.+++|+|.+. ++++ |+.|++|++||+.....
T Consensus 250 ~D~~v~i~~~~~~~~~~~-~~~----~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~----------- 313 (420)
T 4gga_A 250 NDNLVNVWPSAPGEGGWV-PLQ----TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC----------- 313 (420)
T ss_dssp TTSCEEEEESSCCSSCSC-CSE----EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE-----------
T ss_pred ccccceEEeeccccccce-eee----eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc-----------
Confidence 999999998765432111 111 1236788999999999754 4444 45799999999763321
Q ss_pred eEEeecccCcceEEEEecCCc-eEE--ecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEE
Q 018675 260 LCTISGYHDRTIFSVHWSREG-IIA--SGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS 336 (352)
Q Consensus 260 ~~~~~~~~~~~i~~~~~~~~~-~~~--s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s 336 (352)
...+. ....+.++.+.+++ .++ +|..|+.|++|+.... ..+.++.+|.+.|++++|+|+++ +|+|
T Consensus 314 ~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~---------~~v~~l~gH~~~V~~l~~spdg~-~l~S 381 (420)
T 4gga_A 314 LSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM---------AKVAELKGHTSRVLSLTMSPDGA-TVAS 381 (420)
T ss_dssp EEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTSS-CEEE
T ss_pred ceeec--cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC---------cEEEEEcCCCCCEEEEEEcCCCC-EEEE
Confidence 11221 23456777777754 444 3457999999976432 23455679999999999999986 6889
Q ss_pred ecCCCeEEEEeecc
Q 018675 337 ASDDGMIKIWELAN 350 (352)
Q Consensus 337 ~~~Dg~i~iw~~~~ 350 (352)
||.|++|+||++..
T Consensus 382 ~s~D~tvriWdv~~ 395 (420)
T 4gga_A 382 AAADETLRLWRCFE 395 (420)
T ss_dssp EETTTEEEEECCSC
T ss_pred EecCCeEEEEECCC
Confidence 99999999999853
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-37 Score=276.05 Aligned_cols=301 Identities=17% Similarity=0.300 Sum_probs=229.1
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCCCc
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFDAT 97 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~ 97 (352)
.|...|++++|+|+ +.+|++++.|+.|++|++............+ ..|...|++++|+|+ +++|++++.|+.
T Consensus 65 ~~~~~v~~~~~s~~------~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 137 (416)
T 2pm9_A 65 QVDSKFNDLDWSHN------NKIIAGALDNGSLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQDNVLASGGNNGE 137 (416)
T ss_dssp CCSSCEEEEEECSS------SSCEEEEESSSCEEEECCSSTTSCCCEEEEC-CCSSSCCCEEEECSSSTTBEEEECSSSC
T ss_pred ecCCceEEEEECCC------CCeEEEEccCCeEEEeecccccccccchhhc-cCCccceEEEEEcCCCCCEEEEEcCCCe
Confidence 58999999999997 4789999999999999987621111111122 458899999999998 899999999999
Q ss_pred EEEEEccCCc------ee-eeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecC------c
Q 018675 98 TCIWEDVGGD------YE-CVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH------A 163 (352)
Q Consensus 98 i~i~~~~~~~------~~-~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h------~ 163 (352)
|++||..+.. .. ......+|...|.+++|+|+ +.+|++++.|+.|++||+.... .+..+..| .
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK---EVIHLSYTSPNSGIK 214 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE---EEEEECCCCCSSCCC
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC---cceEEeccccccccC
Confidence 9999987654 11 12234678999999999998 7899999999999999997653 34444444 6
Q ss_pred cCeeEEEEcCCC-CEEEEEeCCC---cEEEEecCCCCCCCceeEeeeeccCC-CCcccEEEEEEcC-CCCEEEEEeCCCc
Q 018675 164 QDVKMVQWHPTM-DVLFSCSYDN---TIKVWWAEDTDSDNWHCVQTISESNN-GHSSTIWALSFNA-KGDKLVSCSDDLT 237 (352)
Q Consensus 164 ~~v~~~~~~~~~-~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~l~~~~-~~~~l~s~~~dg~ 237 (352)
..+.+++|+|++ .++++++.|+ .|++|++..... ...... +|...|.+++|+| ++.+|++++.||.
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~ 286 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT--------PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT 286 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS--------CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC--------CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC
Confidence 789999999997 6899999998 999998865321 111223 6889999999999 8999999999999
Q ss_pred EEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCccc--------
Q 018675 238 IKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSY-------- 307 (352)
Q Consensus 238 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~-------- 307 (352)
|++||++..+ ....+. .|...+.+++|++++ ++++++.|+.+++|+............
T Consensus 287 v~~wd~~~~~-----------~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 354 (416)
T 2pm9_A 287 VLLWNPESAE-----------QLSQFP-ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQES 354 (416)
T ss_dssp EEEECSSSCC-----------EEEEEE-CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------
T ss_pred EEEeeCCCCc-----------cceeec-CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCC
Confidence 9999975321 222232 366788999999975 899999999999998754322111000
Q ss_pred cee------------------eecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 308 KML------------------LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 308 ~~~------------------~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
... ......|...+++++|+|+++ +|++++.||+|+||++..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 355 ETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK-LVQITPDGKGVSITNPKI 414 (416)
T ss_dssp ------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE-EECBCTTSSCBCCBCCCC
T ss_pred cccccccccccccccccccccccCCccccCCccceEEeeCCe-EEEEeCCCCeEEEEEecc
Confidence 000 011223778899999999986 788999999999999875
No 46
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=261.79 Aligned_cols=266 Identities=31% Similarity=0.574 Sum_probs=209.0
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA 96 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~ 96 (352)
..+|.+.|++++|+|+ +.+|++|+.|+++++|+...... .+...+ ..|...|.+++|+|++++|++|+.|+
T Consensus 57 ~~~h~~~v~~~~~sp~------g~~l~s~s~D~~v~iw~~~~~~~--~~~~~~-~~h~~~v~~v~~sp~~~~l~s~s~D~ 127 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPC------GNYLASASFDATTCIWKKNQDDF--ECVTTL-EGHENEVKSVAWAPSGNLLATCSRDK 127 (345)
T ss_dssp CSSCSSCEEEEEECTT------SSEEEEEETTSCEEEEEECCC-E--EEEEEE-CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccCCcEEEEEECCC------CCEEEEEECCCcEEEEEccCCCe--EEEEEc-cCCCCCceEEEEeCCCCEEEEEECCC
Confidence 3689999999999997 57999999999999999876531 112222 45889999999999999999999999
Q ss_pred cEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC
Q 018675 97 TTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 97 ~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 175 (352)
+|++||...+. ..++..+.+|...|.+++|+|++++|++++.|++|++||+... ...+...+.+|...|.+++|+|++
T Consensus 128 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~-~~~~~~~~~~h~~~v~~l~~sp~g 206 (345)
T 3fm0_A 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEED-DWVCCATLEGHESTVWSLAFDPSG 206 (345)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECTTS
T ss_pred eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCC-CEEEEEEecCCCCceEEEEECCCC
Confidence 99999986543 3456678899999999999999999999999999999998654 334556788999999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCC----------CCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 176 DVLFSCSYDNTIKVWWAEDTDS----------DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~~~~----------~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
.+|++++.|+.|++|+...... ..+.++.++ ...|...|++++|+|++..|++++.|+.|++|+.+.
T Consensus 207 ~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 207 QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTL---SGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDP 283 (345)
T ss_dssp SEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEE---CSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECT
T ss_pred CEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEe---cCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC
Confidence 9999999999999998633211 112233222 224888999999999999999999999999998753
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccC
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESK 298 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~ 298 (352)
..... .............|...|.+++|+|++ ++++++.|+.+++|....
T Consensus 284 ~~~~~---~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 284 NSDPQ---QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp TSCTT---SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred CCCcc---eeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 21110 001111122223578889999999964 899999999999997643
No 47
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=264.99 Aligned_cols=310 Identities=20% Similarity=0.312 Sum_probs=228.2
Q ss_pred eeeecCCccceEEEEEcc-CCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeee--ee------ecceecceEEEEECC
Q 018675 14 IQTLEGHTDRVWSLAWKP-TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKA--VL------EEMHTRTVRSCAWSP 84 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p-~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~--~~------~~~h~~~v~~~~~s~ 84 (352)
...+.+|.+.|++++|+| + +++|++++.||+|++|++.+......... .. ...|...|.+++|+|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 109 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVE------GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYP 109 (408)
T ss_dssp EEECCCCSSCEEEEEECTTT------CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECT
T ss_pred eeeeeccCCcEEEEEEecCC------CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEcc
Confidence 456778999999999999 5 47999999999999999887643221110 00 023889999999999
Q ss_pred -CCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC---CcEEEEeeCCCcEEEEecCCCCeeEEEEEee
Q 018675 85 -SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIWEVMPGNEFECVSVLQ 160 (352)
Q Consensus 85 -~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 160 (352)
++++|++++.|+.+++|+..++.. ...+. +...+.++.|++. +.++++++.|+.|++||+..+. .+..+.
T Consensus 110 ~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~ 183 (408)
T 4a11_B 110 HDTGMFTSSSFDKTLKVWDTNTLQT--ADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS---CSHILQ 183 (408)
T ss_dssp TCTTCEEEEETTSEEEEEETTTTEE--EEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC---CCEEEC
T ss_pred CCCcEEEEEeCCCeEEEeeCCCCcc--ceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc---eeeeec
Confidence 778999999999999999877643 33333 6788999999884 4499999999999999997654 345677
Q ss_pred cCccCeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCce-------eEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 161 GHAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWH-------CVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 161 ~h~~~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~-------~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
+|...|.+++|+|++. ++++++.|+.|++|++......... ..........+|...|.+++|+|++.+|+++
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 8999999999999988 5899999999999998654211000 0001111224788999999999999999999
Q ss_pred eCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeee
Q 018675 233 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 312 (352)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 312 (352)
+.||.|++||++..+........ .. ..................++.++.++.+++|+.... ..+.
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~---------~~~~ 328 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGK----VC--NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG---------EQIT 328 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCC----CC--CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC---------CEEE
T ss_pred cCCCeEEEEECCCCccceecccc----cc--ccccccceeEEecCCCceEEEEecCCEEEEEECcCC---------ccee
Confidence 99999999998643321100000 00 000111122233344567778888999999976432 2334
Q ss_pred cccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 313 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 313 ~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
...+|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 329 ~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 329 MLKGHYKTVDCCVFQSNFQ-ELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEEECC-
T ss_pred eeccCCCeEEEEEEcCCCC-EEEEECCCCeEEEEeCCCC
Confidence 5678999999999999986 6889999999999999753
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-35 Score=264.78 Aligned_cols=264 Identities=24% Similarity=0.406 Sum_probs=210.7
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CCEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GKLLA 90 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~ 90 (352)
++..+.+|.+.|++++|+|+ +++||+|+.|++|++|++..... .....+ ..|...|++++|+|+ +++|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~------~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~-~~h~~~v~~~~~~~~~~~~~l~ 73 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYY------GKRLATCSSDKTIKIFEVEGETH--KLIDTL-TGHEGPVWRVDWAHPKFGTILA 73 (379)
T ss_dssp --CCEEECCCCEEEEEECSS------SSEEEEEETTSCEEEEEEETTEE--EEEEEE-CCCSSCEEEEEECCGGGCSEEE
T ss_pred ccEEecCCcccEEEEEEcCC------CCEEEEEECCCcEEEEecCCCcc--eeeeEe-cCCCCcEEEEEeCCCCCCCEEE
Confidence 46678999999999999997 57999999999999999874321 112222 458899999999987 99999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
+|+.|+.|++||..++.......+..|...|.+++|+|+ +.+|++++.|++|++||+....... ...+.+|...+.+
T Consensus 74 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~v~~ 152 (379)
T 3jrp_A 74 SCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNS 152 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC-EEEEECCTTCEEE
T ss_pred EeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee-eEEecCCCCceEE
Confidence 999999999999988765567778889999999999999 9999999999999999997653322 3356789999999
Q ss_pred EEEcC-------------CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC---CCEEEEE
Q 018675 169 VQWHP-------------TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK---GDKLVSC 232 (352)
Q Consensus 169 ~~~~~-------------~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~---~~~l~s~ 232 (352)
++|+| ++..+++++.|+.|++|++..... .+.... ...+|...|.+++|+|+ +.+|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~----~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-TYVLES----TLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp EEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT-EEEEEE----EECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred EEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc-ceeeEE----EEecccCcEeEEEECCCCCCCCeEEEE
Confidence 99999 689999999999999998765321 122222 23478899999999999 8999999
Q ss_pred eCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeee
Q 018675 233 SDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLK 312 (352)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 312 (352)
+.||.|++||++..... . .....
T Consensus 228 ~~dg~i~iwd~~~~~~~---------------------~------------------------------------~~~~~ 250 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGP---------------------W------------------------------------KKTLL 250 (379)
T ss_dssp ETTSCEEEEEESSTTSC---------------------C------------------------------------EEEES
T ss_pred eCCCEEEEEeCCCCCcc---------------------c------------------------------------eeeee
Confidence 99999999986421000 0 00011
Q ss_pred cccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 313 KEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 313 ~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
....|...|++++|+|+++ +|++++.||.|++|++.
T Consensus 251 ~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 251 KEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEE
T ss_pred ccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCC
Confidence 2245778899999999986 67899999999999986
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-35 Score=266.29 Aligned_cols=288 Identities=24% Similarity=0.370 Sum_probs=223.4
Q ss_pred eeecCCccceE--EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 15 QTLEGHTDRVW--SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 15 ~~~~gH~~~V~--~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
....+|.+.++ +++|++. .+++++.|++|++|+..++... ......|...|.+++|+|++++|++|
T Consensus 85 ~~~~~~~~~~~~~~~~~s~~--------~l~~~~~d~~v~lw~~~~~~~~----~~~~~~~~~~v~~v~~s~~~~~l~~~ 152 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSNL--------NVVAVALERNVYVWNADSGSVS----ALAETDESTYVASVKWSHDGSFLSVG 152 (401)
T ss_dssp EECTTCCCCTTCBCEEECTT--------SEEEEEETTEEEEEETTTCCEE----EEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred eeCCCCcCCceEEEEeecCC--------CEEEEECCCeEEEeeCCCCcEe----EeeecCCCCCEEEEEECCCCCEEEEE
Confidence 34457877644 4666653 4788899999999999876532 22333478899999999999999999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
+.|+.+++|+..+++ ....+.+|...|.+++| +++.|++++.|+.|++||+.... .....+.+|...|.+++|+
T Consensus 153 ~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 153 LGNGLVDIYDVESQT--KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN--HQIGTLQGHSSEVCGLAWR 226 (401)
T ss_dssp ETTSCEEEEETTTCC--EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEEC
T ss_pred CCCCeEEEEECcCCe--EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc--ceeeEEcCCCCCeeEEEEc
Confidence 999999999987663 46677899999999999 45799999999999999997433 3456678899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEe--CCCcEEEEcCCccccc
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCS--DDLTIKIWGADITRMQ 249 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~--~dg~i~iwd~~~~~~~ 249 (352)
|++.++++++.|+.|++|++.... ....+ .+|...|.+++|+|++. ++++++ .|+.|++||++...
T Consensus 227 ~~~~~l~s~~~d~~v~iwd~~~~~-----~~~~~----~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-- 295 (401)
T 4aez_A 227 SDGLQLASGGNDNVVQIWDARSSI-----PKFTK----TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-- 295 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTCSS-----EEEEE----CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC--
T ss_pred CCCCEEEEEeCCCeEEEccCCCCC-----ccEEe----cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC--
Confidence 999999999999999999876531 22222 36888999999999765 555554 79999999975321
Q ss_pred cCCCCccceeeEEeecccCcceEEEEecCCc-eEEe--cCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 250 SGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIAS--GAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s--~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
....+. +...+.++.|++++ .+++ |+.|+.+++|+...... .......+|...|++++|
T Consensus 296 ---------~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~-------~~~~~~~~h~~~v~~~~~ 357 (401)
T 4aez_A 296 ---------RVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL-------TKQVDIPAHDTRVLYSAL 357 (401)
T ss_dssp ---------EEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE-------EEEEEEECCSSCCCEEEE
T ss_pred ---------EEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc-------eeEEEecCCCCCEEEEEE
Confidence 122222 45678999999976 5555 66899999997643211 112234689999999999
Q ss_pred cCCCcceEEEecCCCeEEEEeecc
Q 018675 327 SPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+|+++ +|++++.||.|++|++..
T Consensus 358 s~dg~-~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 358 SPDGR-ILSTAASDENLKFWRVYD 380 (401)
T ss_dssp CTTSS-EEEEECTTSEEEEEECCC
T ss_pred CCCCC-EEEEEeCCCcEEEEECCC
Confidence 99986 688999999999999865
No 50
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=253.13 Aligned_cols=282 Identities=22% Similarity=0.338 Sum_probs=214.3
Q ss_pred eEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEc
Q 018675 24 VWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103 (352)
Q Consensus 24 V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 103 (352)
+++|+|+|+ .+||+| .|++|+|||..+++..... ....|...|++++|+|++++|++|+.|++|++|+.
T Consensus 28 ~~~l~WS~~-------~~lAvg-~D~tV~iWd~~tg~~~~~~---~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~ 96 (318)
T 4ggc_A 28 LNLVDWSSG-------NVLAVA-LDNSVYLWSASSGDILQLL---QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 96 (318)
T ss_dssp CBCEEECTT-------SEEEEE-ETTEEEEEETTTCCEEEEE---ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEECCC-------CEEEEE-eCCEEEEEECCCCCEEEEE---EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeec
Confidence 578999985 366665 5999999999887543221 11347788999999999999999999999999998
Q ss_pred cCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC
Q 018675 104 VGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY 183 (352)
Q Consensus 104 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 183 (352)
.++ +++..+.+|...+.++.+ ++..+++++.++.+++|+..... ..+..+.+|...+..+.+++++.++++++.
T Consensus 97 ~~~--~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 170 (318)
T 4ggc_A 97 QQQ--KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE--HHVATLSGHSQEVCGLRWAPDGRHLASGGN 170 (318)
T ss_dssp TTT--EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCc--eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc--eeEEEEcCccCceEEEEEcCCCCEEEEEec
Confidence 876 456777899888877654 55799999999999999976543 345667889999999999999999999999
Q ss_pred CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE---EEEeCCCcEEEEcCCccccccCCCCccceee
Q 018675 184 DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL---VSCSDDLTIKIWGADITRMQSGDGYASWRHL 260 (352)
Q Consensus 184 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l---~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 260 (352)
|+.|++|++........ .......|...|.++.++|++..+ ++++.++.|++|+...... .
T Consensus 171 d~~i~iwd~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-----------~ 234 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWV-----PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-----------L 234 (318)
T ss_dssp TSCEEEEESSCBTTBSC-----CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE-----------E
T ss_pred CcceeEEECCCCccccc-----ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc-----------c
Confidence 99999999865432211 111123567889999999976543 4667899999998753221 1
Q ss_pred EEeecccCcceEEEEecCCc-eE--EecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEe
Q 018675 261 CTISGYHDRTIFSVHWSREG-II--ASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA 337 (352)
Q Consensus 261 ~~~~~~~~~~i~~~~~~~~~-~~--~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~ 337 (352)
.. ..+...+..+.+.+.+ .+ ++++.|+.+++|+.... ..+.++.+|...|++++|+|+++ +|+||
T Consensus 235 ~~--~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~---------~~~~~l~gH~~~V~~l~~spdg~-~l~S~ 302 (318)
T 4ggc_A 235 SA--VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM---------AKVAELKGHTSRVLSLTMSPDGA-TVASA 302 (318)
T ss_dssp EE--EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTSS-CEEEE
T ss_pred cc--ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC---------cEEEEEcCCCCCEEEEEEcCCCC-EEEEE
Confidence 11 1234556777777754 33 34568999999976432 23455679999999999999986 68899
Q ss_pred cCCCeEEEEeecc
Q 018675 338 SDDGMIKIWELAN 350 (352)
Q Consensus 338 ~~Dg~i~iw~~~~ 350 (352)
|.||+|+||++..
T Consensus 303 s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 303 AADETLRLWRCFE 315 (318)
T ss_dssp ETTTEEEEECCSC
T ss_pred ecCCeEEEEECCC
Confidence 9999999999864
No 51
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.5e-35 Score=258.65 Aligned_cols=251 Identities=21% Similarity=0.355 Sum_probs=205.1
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
.+.++.+|...|.+++|+|+ +.++++++.|+.+++|++.+..........+ ..|...|.++.|++++. ++++
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~------~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-l~s~ 160 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAPS------GNYVACGGLDNICSIYNLKTREGNVRVSREL-AGHTGYLSCCRFLDDNQ-IVTS 160 (340)
T ss_dssp EEEEEECSSSCEEEEEECTT------SSEEEEEETTCEEEEEETTTCSBSCEEEEEE-ECCSSCEEEEEEEETTE-EEEE
T ss_pred cceEeecCCccEEEEEECCC------CCEEEEEeCCCeEEEEECccCCCcceeEEEe-cCCCccEEEEEECCCCc-EEEE
Confidence 45667899999999999997 5799999999999999987654222222222 35889999999998876 8899
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 172 (352)
+.|++|++||..++ .+...+.+|.+.|.+++|+|++.+|++|+.|++|++||+..+. +...+.+|...|.+++|+
T Consensus 161 s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 161 SGDTTCALWDIETG--QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---CRQTFTGHESDINAICFF 235 (340)
T ss_dssp ETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEEC
T ss_pred ECCCcEEEEECCCC--cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---eEEEEcCCcCCEEEEEEc
Confidence 99999999998776 4567788999999999999999999999999999999997654 456778899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCC
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGD 252 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (352)
|++.+|++++.|+.|++||+... .....+. ...+...|.+++|+|++.+|++|+.||.|++||+....
T Consensus 236 p~~~~l~s~s~d~~v~iwd~~~~-----~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----- 303 (340)
T 1got_B 236 PNGNAFATGSDDATCRLFDLRAD-----QELMTYS--HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD----- 303 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTT-----EEEEEEC--CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-----
T ss_pred CCCCEEEEEcCCCcEEEEECCCC-----cEEEEEc--cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc-----
Confidence 99999999999999999987643 1222221 22344579999999999999999999999999975321
Q ss_pred CCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEE
Q 018675 253 GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFV 295 (352)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~ 295 (352)
....+. .|...+.++.+++++ ++++++.|+.+++|+
T Consensus 304 ------~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 304 ------RAGVLA-GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ------EEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ------EeeEee-cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 222332 477889999999986 799999999999993
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-36 Score=269.10 Aligned_cols=274 Identities=18% Similarity=0.264 Sum_probs=188.8
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC------CCcEEEEEccCCce--eee
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF------DATTCIWEDVGGDY--ECV 111 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------d~~i~i~~~~~~~~--~~~ 111 (352)
.++++++.+.....|++.... ...|++.|++++|+|||++||+|+. |+.+++|+...+.. ...
T Consensus 17 ~~~~~~~g~~~~~~w~~p~~~---------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~ 87 (357)
T 4g56_B 17 NLYFQSNGSSKGSAWGRPVTA---------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC 87 (357)
T ss_dssp --------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC
T ss_pred ceEEecCCCccccccCCCCCC---------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe
Confidence 345666677888889875321 1348899999999999999999997 67899997654421 112
Q ss_pred EeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEE-EEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 112 ATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC-VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190 (352)
Q Consensus 112 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw 190 (352)
....+|...|.+++|+|++. +++++.|++|++||+..++.... .....+|...|++++|+|++++|++++.|+.|++|
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp SEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred cccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 23456888999999999875 55688899999999875542211 12345789999999999999999999999999999
Q ss_pred ecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCc
Q 018675 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDR 269 (352)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (352)
++... .....+ .+|...|.+++|+|++. ++++++.||+|++||++..+..... ....+..
T Consensus 167 d~~~~-----~~~~~~----~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~----------~~~~~~~ 227 (357)
T 4g56_B 167 DLSQK-----AVLKSY----NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI----------DFCASDT 227 (357)
T ss_dssp ETTTT-----EEEEEE----CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC----------CCTTCCS
T ss_pred ECCCC-----cEEEEE----cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeee----------eeccccc
Confidence 87543 233333 47899999999999875 7899999999999998643321100 0112455
Q ss_pred ceEEEEecCC--ceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEe
Q 018675 270 TIFSVHWSRE--GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWE 347 (352)
Q Consensus 270 ~i~~~~~~~~--~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~ 347 (352)
.+.+++|+|+ .++++++.|+.+++|+.... .......+|...|++++|+|++.++|+||+.||+|+|||
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~---------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNP---------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCG---------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCC---------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 6888999885 37889999999999976432 123446789999999999999877899999999999999
Q ss_pred eccC
Q 018675 348 LANT 351 (352)
Q Consensus 348 ~~~~ 351 (352)
+..+
T Consensus 299 ~~~~ 302 (357)
T 4g56_B 299 ADFS 302 (357)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8653
No 53
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.1e-35 Score=264.99 Aligned_cols=292 Identities=12% Similarity=0.091 Sum_probs=203.7
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCC-------eEEEEecCCCceee-----eeeeeeecceecceEEEEECCCCCEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDK-------TVRIWEQSASSRFW-----NCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~-------~v~~w~~~~~~~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
-+|+|++|+|+ +++|++||.|. .|++|++....... ......-..|...|.+++++ ++.+
T Consensus 15 ~PV~sv~fs~d------g~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~ 86 (365)
T 4h5i_A 15 YPAYGAKFLNN------DTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGII 86 (365)
T ss_dssp SCEEEEEEEET------TEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEE
T ss_pred CCEEEEEEeCC------CcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEE
Confidence 47999999997 57999998654 59999987553211 01111112356677777654 5566
Q ss_pred EEEe-----------CCCcEEEEEccCCce--eeeEee-----ccccCCeeEEEECCCCcEEEE--eeCCCcEEEEecCC
Q 018675 90 ATAS-----------FDATTCIWEDVGGDY--ECVATL-----EGHENEVKSVSWNASGTLLAT--CGRDKSVWIWEVMP 149 (352)
Q Consensus 90 ~s~~-----------~d~~i~i~~~~~~~~--~~~~~~-----~~h~~~v~~v~~~~~~~~l~s--~~~d~~v~vwd~~~ 149 (352)
++|. .|+.+++|+...... ...... ..+...+++++|+|+|+++++ ++.|++|++||+..
T Consensus 87 ~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~ 166 (365)
T 4h5i_A 87 LVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD 166 (365)
T ss_dssp EEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT
T ss_pred EEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC
Confidence 6654 567899998654321 112111 233456899999999998764 45789999999876
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
.. ++..+. |...|.+++|+|+++++++++.++ +.+|+..... ... .....+|...|.+++|+|++.++
T Consensus 167 ~~---~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~-----~~~--~~~~~~~~~~v~~v~fspdg~~l 234 (365)
T 4h5i_A 167 LT---EKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS-----CIA--RKTDFDKNWSLSKINFIADDTVL 234 (365)
T ss_dssp TE---EEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC-----EEE--EECCCCTTEEEEEEEEEETTEEE
T ss_pred Cc---EEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCc-----cee--eeecCCCCCCEEEEEEcCCCCEE
Confidence 53 344443 677899999999999999998555 5566543321 111 11234688899999999999999
Q ss_pred EEEeCCC----cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccC
Q 018675 230 VSCSDDL----TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDG 304 (352)
Q Consensus 230 ~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~ 304 (352)
++++.|+ .+++|++...... ......+ ..|...|.+++|+|++ ++++|+.|++|++|+....
T Consensus 235 ~~~s~d~~~~~~i~~~~~~~~~~~-------~~~~~~~-~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~----- 301 (365)
T 4h5i_A 235 IAASLKKGKGIVLTKISIKSGNTS-------VLRSKQV-TNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL----- 301 (365)
T ss_dssp EEEEESSSCCEEEEEEEEETTEEE-------EEEEEEE-ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT-----
T ss_pred EEEecCCcceeEEeecccccceec-------ceeeeee-cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC-----
Confidence 9999887 5777875422110 0111122 2467789999999987 7899999999999976432
Q ss_pred cccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 305 PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 305 ~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..+.....+|...|++++||||++ +|||||.|++||||++..
T Consensus 302 ---~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 302 ---SMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ---EEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCT
T ss_pred ---cEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCC
Confidence 122223578999999999999996 689999999999999864
No 54
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.6e-35 Score=287.08 Aligned_cols=296 Identities=20% Similarity=0.296 Sum_probs=239.6
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+.....+.+|.+.|++++|+|+ ++++|+++.||+|++|+..++..... + ..|..+|++++|+|++++|+
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~------~~~la~~~~~g~v~iwd~~~~~~~~~----~-~~~~~~v~~~~~s~~~~~l~ 71 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPT------EPWVLTTLYSGRVEIWNYETQVEVRS----I-QVTETPVRAGKFIARKNWII 71 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSS------SSEEEEEETTSEEEEEETTTTEEEEE----E-ECCSSCEEEEEEEGGGTEEE
T ss_pred cccceeeecCCCceEEEEECCC------CCEEEEEeCCCEEEEEECCCCceEEE----E-ecCCCcEEEEEEeCCCCEEE
Confidence 4566788999999999999997 57999999999999999987643222 2 34889999999999999999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+|+.|+.|++|+..+++ ....+.+|.+.|++++|+|++.+|++++.|++|++||+..+. .....+.+|...+.+++
T Consensus 72 ~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 72 VGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVA 147 (814)
T ss_dssp EEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS--EEEEEEECCSSCEEEEE
T ss_pred EEeCCCeEEEEECCCCc--EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc--eEEEEEcCCCCcEEEEE
Confidence 99999999999987764 466778899999999999999999999999999999987543 34566778999999999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC--CCCEEEEEeCCCcEEEEcCCccc
Q 018675 171 WHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA--KGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 171 ~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~--~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
|+| ++..+++++.|+.|++|++..... ...+. ..+...+.+++|+| ++.+|++++.||.|++||++...
T Consensus 148 ~~p~~~~~l~~~~~dg~v~vwd~~~~~~-----~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTP-----NFTLT---TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCSSC-----SEEEE---CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcc-----eeEEe---cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 999 788999999999999998754321 11121 23457899999999 99999999999999999875321
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
....+. .|...+.++.|++++ ++++++.|+.+++|+.... ........|...|.+++|
T Consensus 220 -----------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~---------~~~~~~~~~~~~v~~~~~ 278 (814)
T 3mkq_A 220 -----------CVATLE-GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---------KVEKTLNVGLERSWCIAT 278 (814)
T ss_dssp -----------EEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---------SEEEEECCSSSSEEEEEE
T ss_pred -----------EEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------cEEEEeecCCCcEEEEEE
Confidence 222222 366789999999976 7999999999999976432 223345678889999999
Q ss_pred cCCCcceEEEecCCCeEEEEeecc
Q 018675 327 SPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 327 sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+|+++.++++++.|+.+.+|++..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 279 HPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp CTTCGGGEEEEEETTEEEEEECSC
T ss_pred ccCCCceEEEEEeCCCEEEEEcCC
Confidence 999877645566688888998754
No 55
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1e-34 Score=296.74 Aligned_cols=309 Identities=23% Similarity=0.445 Sum_probs=238.6
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
....+.+|.+.|++++|+|+ ++++++|+.|++|++|+..++..... + ..|...|.+++|+|++++|++|
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~------~~~l~s~~~d~~i~vw~~~~~~~~~~----~-~~h~~~v~~~~~s~~~~~l~s~ 675 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQD------GQRIASCGADKTLQVFKAETGEKLLD----I-KAHEDEVLCCAFSSDDSYIATC 675 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEEEE----E-CCCSSCEEEEEECTTSSEEEEE
T ss_pred ceEEEecccccEEEEEECCC------CCEEEEEeCCCeEEEEECCCCCEEEE----e-ccCCCCEEEEEEecCCCEEEEE
Confidence 33467899999999999997 57999999999999999988754322 2 3588999999999999999999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC--CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
+.|++|++||..++ .++..+.+|...|.+++|+| ++.++++++.|++|++||+..+. +...+.+|...|++++
T Consensus 676 ~~d~~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~~~ 750 (1249)
T 3sfz_A 676 SADKKVKIWDSATG--KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCR 750 (1249)
T ss_dssp ETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEECCCSSCEEEEE
T ss_pred eCCCeEEEEECCCC--ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhheecCCCCCEEEEE
Confidence 99999999998876 35677889999999999999 55689999999999999997654 4567789999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCc---------------------ee-----------------E--------e
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNW---------------------HC-----------------V--------Q 204 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~---------------------~~-----------------~--------~ 204 (352)
|+|++..+++++.|+.|++|++........ .+ + .
T Consensus 751 ~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 751 FSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp ECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred EecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 999999999999999999998754210000 00 0 0
Q ss_pred eeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEE
Q 018675 205 TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIA 283 (352)
Q Consensus 205 ~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~ 283 (352)
.+.....+|...|.+++|+|++.++++++.||.|++|+++... ....+ ..|...+.++.|++++ .++
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~-----------~~~~~-~~h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL-----------KVADC-RGHLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE-----------EEEEE-CCCSSCEEEEEECTTSSEEE
T ss_pred ceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-----------eeeec-CCCccceEEEEECCCCCEEE
Confidence 0000112678899999999999999999999999999875321 11222 2466778888888876 788
Q ss_pred ecCCCCeEEEEEccCCcc------------------------------------------------------------c-
Q 018675 284 SGAADDSVQFFVESKDDL------------------------------------------------------------I- 302 (352)
Q Consensus 284 s~~~d~~v~~~~~~~~~~------------------------------------------------------------~- 302 (352)
+++.|+.+++|+...... .
T Consensus 899 s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~ 978 (1249)
T 3sfz_A 899 TASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAF 978 (1249)
T ss_dssp EEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEE
T ss_pred EEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEE
Confidence 888888888886421000 0
Q ss_pred ---c------CcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 303 ---D------GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 303 ---~------~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+ ............+|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 979 g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 979 GDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK-TLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp EETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS-CEEEECSSSBEEEEETTT
T ss_pred EcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCC
Confidence 0 0000112234468999999999999986 578999999999999865
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.4e-34 Score=263.38 Aligned_cols=288 Identities=24% Similarity=0.409 Sum_probs=226.4
Q ss_pred eeeeeecCCccce-EEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 12 REIQTLEGHTDRV-WSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V-~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
....++.+|.+.| .++.+.+ .++++|+.|++|++|+..+++.... + ..|...|.+++|+|++ .++
T Consensus 112 ~~~~~l~~h~~~v~~~~~~~~--------~~l~sgs~dg~i~vwd~~~~~~~~~----~-~~h~~~V~~l~~~~~~-~l~ 177 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQFED--------NYVITGADDKMIRVYDSINKKFLLQ----L-SGHDGGVWALKYAHGG-ILV 177 (464)
T ss_dssp CEEEEEECCSSSCEEEEEEET--------TEEEEEETTSCEEEEETTTTEEEEE----E-CCCSSCEEEEEECSTT-EEE
T ss_pred cceEEEcCCCCCcEEEEEECC--------CEEEEEcCCCcEEEEECCCCcEEEE----E-eCCCcCEEEEEEcCCC-EEE
Confidence 3456889999885 6777643 5899999999999999987653222 2 3589999999999988 999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEEC--CCCcEEEEeeCCCcEEEEecCCCCeeE--------------
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWN--ASGTLLATCGRDKSVWIWEVMPGNEFE-------------- 154 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~~~d~~v~vwd~~~~~~~~-------------- 154 (352)
+|+.|++|++||..++ .+...+.+|.+.|.+++|+ +++.++++++.|++|++||+.......
T Consensus 178 s~s~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 255 (464)
T 3v7d_B 178 SGSTDRTVRVWDIKKG--CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 255 (464)
T ss_dssp EEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESC
T ss_pred EEeCCCCEEEEECCCC--cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeec
Confidence 9999999999998776 4567788999999999998 577899999999999999987554221
Q ss_pred ------EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 155 ------CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 155 ------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
....+.+|...+.++ ++++.++++++.|+.|++|++... .+...+ .+|...|.+++|+|++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~-----~~~~~~----~~~~~~v~~~~~~~~~~~ 324 (464)
T 3v7d_B 256 PEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM-----KCLYIL----SGHTDRIYSTIYDHERKR 324 (464)
T ss_dssp GGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT-----EEEEEE----CCCSSCEEEEEEETTTTE
T ss_pred cCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC-----cEEEEe----cCCCCCEEEEEEcCCCCE
Confidence 245567888888776 567889999999999999987542 233333 368899999999999999
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYK 308 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~ 308 (352)
+++|+.||.|++||++..+ ....+. .|...+.++.++ +.++++++.|+.+++|+.....
T Consensus 325 l~sg~~dg~i~vwd~~~~~-----------~~~~~~-~h~~~v~~~~~~-~~~l~s~s~dg~v~vwd~~~~~-------- 383 (464)
T 3v7d_B 325 CISASMDTTIRIWDLENGE-----------LMYTLQ-GHTALVGLLRLS-DKFLVSAAADGSIRGWDANDYS-------- 383 (464)
T ss_dssp EEEEETTSCEEEEETTTTE-----------EEEEEC-CCSSCEEEEEEC-SSEEEEEETTSEEEEEETTTCC--------
T ss_pred EEEEeCCCcEEEEECCCCc-----------EEEEEe-CCCCcEEEEEEc-CCEEEEEeCCCcEEEEECCCCc--------
Confidence 9999999999999975321 222232 367788999987 5789999999999999765321
Q ss_pred eeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 309 MLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 309 ~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
... ...|...+..++|+|+++ ++++++ ||.|+|||+..+
T Consensus 384 ~~~--~~~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 384 RKF--SYHHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp EEE--EEECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTC
T ss_pred eee--eecCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCC
Confidence 111 123566788889999886 677887 999999998754
No 57
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.9e-34 Score=251.16 Aligned_cols=252 Identities=21% Similarity=0.360 Sum_probs=199.8
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
.+.++.+|...|++++|+|+ +.+|+||+.|++|++||+.+++... .+ ..|...|.+++|+|++++|++|
T Consensus 57 ~~~~~~~h~~~v~~~~~s~d------g~~l~s~s~D~~v~~wd~~~~~~~~----~~-~~h~~~v~~~~~~~~~~~l~s~ 125 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTAD------GAYALSASWDKTLRLWDVATGETYQ----RF-VGHKSDVMSVDIDKKASMIISG 125 (319)
T ss_dssp EEEEEECCSSCEEEEEECTT------SSEEEEEETTSEEEEEETTTTEEEE----EE-ECCSSCEEEEEECTTSCEEEEE
T ss_pred cceEEeCCcccEEEEEECCC------CCEEEEEeCCCEEEEEECCCCCeeE----EE-ccCCCcEEEEEEcCCCCEEEEE
Confidence 45678999999999999997 5799999999999999998775322 22 3588999999999999999999
Q ss_pred eCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC------CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 93 SFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS------GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~------~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
+.|++|++||... .+...+.+|...|.++.|.|. +..|++++.|++|++||+... .....+.+|...|
T Consensus 126 s~D~~i~vwd~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~h~~~v 199 (319)
T 3frx_A 126 SRDKTIKVWTIKG---QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF---QIEADFIGHNSNI 199 (319)
T ss_dssp ETTSCEEEEETTS---CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT---EEEEEECCCCSCE
T ss_pred eCCCeEEEEECCC---CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc---hhheeecCCCCcE
Confidence 9999999999764 346677899999999999985 448999999999999998654 3456678999999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
.+++|+|++.+|++++.|+.|++|++... .....+. +...|.+++|+|++.+|++++.+ .+++|+++..
T Consensus 200 ~~~~~sp~g~~l~s~~~dg~i~iwd~~~~-----~~~~~~~-----~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~ 268 (319)
T 3frx_A 200 NTLTASPDGTLIASAGKDGEIMLWNLAAK-----KAMYTLS-----AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQ 268 (319)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTT-----EEEEEEE-----CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCC-----cEEEEec-----CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcC
Confidence 99999999999999999999999987643 2333332 34679999999999999888755 5999987643
Q ss_pred ccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
....... .........+...+.+++|+|++ ++++++.|+.+++|+.
T Consensus 269 ~~~~~~~----~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 269 YLVDDLR----PEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp EEEEEEC----CCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred eeeeccC----ccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 2110000 00000112245568899999986 8999999999999964
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-34 Score=262.46 Aligned_cols=284 Identities=13% Similarity=0.128 Sum_probs=217.2
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
.+++++|+|+ +++|++++.|+++++|+..+... ...+ ..| ..+....|+|++++|++|+.|+.|++|+
T Consensus 58 ~~~~~~~s~~------g~~l~~~~~d~~v~i~d~~~~~~----~~~~-~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd 125 (420)
T 3vl1_A 58 AGKGNTFEKV------GSHLYKARLDGHDFLFNTIIRDG----SKML-KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLD 125 (420)
T ss_dssp CCTTCEEEEE------ETTEEEEEETTEEEEEECCSEET----TTTS-CSC-CEEEEEEECSSSCEEEEEETTSCEEEEC
T ss_pred cccceeeeec------CCeEEEEEcCCcEEEEEecccce----eeEE-ecC-CceEEEEEecCCCEEEEEECCCCEEEEe
Confidence 3457899997 57899999999999999875422 1111 122 3445557899999999999999999999
Q ss_pred ccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe
Q 018675 103 DVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 103 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
..++ .....+.+|.+.|++++|+|++++|++++.|++|++||+..+.. +..+.+|...|.+++|+|++.+|++++
T Consensus 126 ~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 126 SNFN--LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN---PRTLIGHRATVTDIAIIDRGRNVLSAS 200 (420)
T ss_dssp TTSC--EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC---CEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred CCCc--ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC---ceEEcCCCCcEEEEEEcCCCCEEEEEc
Confidence 8765 34556679999999999999999999999999999999976543 456678999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCceeEeeeeccCCCCc---------------------ccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHS---------------------STIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 183 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~---------------------~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
.|+.|++|++... .....+.. ...|. ..+.+++|+|++++|++++.||.|++|
T Consensus 201 ~d~~v~iwd~~~~-----~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 201 LDGTIRLWECGTG-----TTIHTFNR-KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH 274 (420)
T ss_dssp TTSCEEEEETTTT-----EEEEEECB-TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred CCCcEEEeECCCC-----ceeEEeec-CCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence 9999999987643 22333321 11233 344455568899999999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccceeeecccc-cC
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA-HD 318 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~-h~ 318 (352)
|++..+ ....+...+...+.+++|++++ ++++++.|+.+++|+..... ..+....+ |.
T Consensus 275 d~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~--------~~~~~~~~~~~ 335 (420)
T 3vl1_A 275 NVFSKE-----------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE--------CPVGEFLINEG 335 (420)
T ss_dssp ETTTCC-----------EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--------SCSEEEEESTT
T ss_pred ECCCCc-----------eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc--------CchhhhhccCC
Confidence 975321 2223334467789999999976 79999999999999765421 11122233 67
Q ss_pred cceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 319 MDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 319 ~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..|+++.|+ +++ +|++++.||.|++|++..
T Consensus 336 ~~v~~~~~~-~~~-~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 336 TPINNVYFA-AGA-LFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp SCEEEEEEE-TTE-EEEEETTTEEEEEEEECC
T ss_pred CCceEEEeC-CCC-EEEEecCCccEEEEeccC
Confidence 788888765 554 688999999999999865
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.7e-34 Score=252.20 Aligned_cols=286 Identities=19% Similarity=0.263 Sum_probs=224.5
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTC 99 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~ 99 (352)
|.+.|.+++|+|+ +.+++.+..++.+.+|....... ......|...|++++|+|++++|++++ |+.++
T Consensus 8 ~~~~v~~~~~s~d------g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~ 75 (337)
T 1gxr_A 8 GSKPAYSFHVTAD------GQMQPVPFPPDALIGPGIPRHAR-----QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVK 75 (337)
T ss_dssp EEEECCEEEECSS------SCEEECCCCTTSSSSTTCCSEEE-----EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEE
T ss_pred cCCceeEEEECCC------CCEEEeecCCCcEeccccCCccc-----cceeccCCCceEEEEEecCCcEEEEcC-CCeEE
Confidence 5678999999997 57888887777776665433211 111235889999999999999999998 99999
Q ss_pred EEEccCCce-eeeEeec--cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 100 IWEDVGGDY-ECVATLE--GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 100 i~~~~~~~~-~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
+|+..++.. .....+. +|...|.+++|+|++++|++++.|+.|++||+.... ......+..|...+.+++|+|++.
T Consensus 76 iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~ 154 (337)
T 1gxr_A 76 VWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-PRIKAELTSSAPACYALAISPDSK 154 (337)
T ss_dssp EEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC---EEEEEEECSSSCEEEEEECTTSS
T ss_pred EEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC-cceeeecccCCCceEEEEECCCCC
Confidence 999865432 1222333 788999999999999999999999999999987553 234556778889999999999999
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCcc
Q 018675 177 VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS 256 (352)
Q Consensus 177 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 256 (352)
++++++.|+.|++|++... .....+ .+|...|.+++|+|++.+|++++.||.|++||++..+.
T Consensus 155 ~l~~~~~dg~v~~~d~~~~-----~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-------- 217 (337)
T 1gxr_A 155 VCFSCCSDGNIAVWDLHNQ-----TLVRQF----QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ-------- 217 (337)
T ss_dssp EEEEEETTSCEEEEETTTT-----EEEEEE----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--------
T ss_pred EEEEEeCCCcEEEEeCCCC-----ceeeee----ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce--------
Confidence 9999999999999987543 223333 35888999999999999999999999999999763221
Q ss_pred ceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEE
Q 018675 257 WRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLA 335 (352)
Q Consensus 257 ~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~ 335 (352)
...+ .+...+.++.+++++ ++++++.++.+++|+..... ......|...|++++|+|+++ +|+
T Consensus 218 ---~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~-~l~ 281 (337)
T 1gxr_A 218 ---LQQH--DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----------KYQLHLHESCVLSLKFAYCGK-WFV 281 (337)
T ss_dssp ---EEEE--ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----------EEEECCCSSCEEEEEECTTSS-EEE
T ss_pred ---Eeee--cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC----------eEEEcCCccceeEEEECCCCC-EEE
Confidence 1112 245678899999876 78899999999999765421 123467899999999999986 678
Q ss_pred EecCCCeEEEEeeccC
Q 018675 336 SASDDGMIKIWELANT 351 (352)
Q Consensus 336 s~~~Dg~i~iw~~~~~ 351 (352)
+++.||.|++|++...
T Consensus 282 ~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 282 STGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEETTSEEEEEETTTC
T ss_pred EecCCCcEEEEECCCC
Confidence 9999999999998653
No 60
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=9e-34 Score=258.64 Aligned_cols=291 Identities=26% Similarity=0.423 Sum_probs=224.6
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+....+|...|+|+.+. ++++++|+.|++|++|+..+.+.... + ..|...|.+++| ++++|++
T Consensus 124 ~~~~~~~~~~~~v~~~~~d--------~~~l~~g~~dg~i~iwd~~~~~~~~~----~-~~h~~~v~~l~~--~~~~l~s 188 (435)
T 1p22_A 124 QRIHCRSETSKGVYCLQYD--------DQKIVSGLRDNTIKIWDKNTLECKRI----L-TGHTGSVLCLQY--DERVIIT 188 (435)
T ss_dssp CCEECCCSSCCCEEEEECC--------SSEEEEEESSSCEEEEESSSCCEEEE----E-CCCSSCEEEEEC--CSSEEEE
T ss_pred eEEecccCCCCcEEEEEEC--------CCEEEEEeCCCeEEEEeCCCCeEEEE----E-cCCCCcEEEEEE--CCCEEEE
Confidence 3344456788899999873 36899999999999999987653222 2 358899999998 7899999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
|+.||+|++||..+++ ....+.+|...|.+++|++ ..+++|+.|++|++||+...........+.+|...|.+++|
T Consensus 189 g~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 189 GSSDSTVRVWDVNTGE--MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp EETTSCEEEEESSSCC--EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred EcCCCeEEEEECCCCc--EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 9999999999987764 4677889999999999974 59999999999999999876655555677889999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
++..+++++.|+.|++|++... .....+ .+|...|.++.++ +.++++|+.||.|++||++...
T Consensus 265 --~~~~l~s~~~dg~i~vwd~~~~-----~~~~~~----~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~---- 327 (435)
T 1p22_A 265 --DDKYIVSASGDRTIKVWNTSTC-----EFVRTL----NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA---- 327 (435)
T ss_dssp --ETTEEEEEETTSEEEEEETTTC-----CEEEEE----ECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC----
T ss_pred --CCCEEEEEeCCCeEEEEECCcC-----cEEEEE----cCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCC----
Confidence 6779999999999999987643 233333 2688899999984 6799999999999999986321
Q ss_pred CCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
....+. .|...+.++.+ .+.++++++.||.+++|+...............+....+|...|++++| ++.
T Consensus 328 -------~~~~~~-~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~ 396 (435)
T 1p22_A 328 -------CLRVLE-GHEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEF 396 (435)
T ss_dssp -------EEEEEC-CCSSCEEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSS
T ss_pred -------EEEEEe-CCcCcEEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCC
Confidence 122222 36778889988 5678999999999999976432111111111234456789999999999 444
Q ss_pred ceEEEecCCCeEEEEeecc
Q 018675 332 RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 332 ~~l~s~~~Dg~i~iw~~~~ 350 (352)
.|++++.||+|++|++..
T Consensus 397 -~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 397 -QIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp -CEEECCSSSEEEEEC---
T ss_pred -EEEEEeCCCEEEEEECCC
Confidence 578999999999999864
No 61
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.9e-34 Score=271.57 Aligned_cols=304 Identities=18% Similarity=0.308 Sum_probs=222.8
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceec---ceEEEEECCC-CC
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR---TVRSCAWSPS-GK 87 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~-~~ 87 (352)
..+..+.+|.+.|++++|+|+. ..++++++.|++|++|+..+.+.. ..+ ..|.. .|.+++|+|+ ++
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~-----~~~l~~~~~d~~v~vwd~~~~~~~----~~~-~~~~~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSR-----PMRSMTVGDDGSVVFYQGPPFKFS----ASD-RTHHKQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSS-----SCEEEEEETTTEEEEEETTTBEEE----EEE-CSSSCTTCCEEEEEECSTTCC
T ss_pred CcceeeecCCccEEEEEECCCC-----CcEEEEEeCCCcEEEEeCCCccee----eee-cccCCCCceEEEEEECCCCCC
Confidence 3456788999999999999973 238999999999999998765432 222 34777 8999999999 99
Q ss_pred EEEEEeCCCcEEEEEccCCceeeeEee-c---cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCee----------
Q 018675 88 LLATASFDATTCIWEDVGGDYECVATL-E---GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF---------- 153 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~~~~~~~-~---~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~---------- 153 (352)
+|++++.|+.+++||..+++ .+..+ . +|...|.+++|+ ++.+|++++.|+.|++||+..+...
T Consensus 221 ~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 297 (615)
T 1pgu_A 221 FVITVGSDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL 297 (615)
T ss_dssp EEEEEETTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG
T ss_pred EEEEEeCCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcc
Confidence 99999999999999987664 35555 5 899999999999 9999999999999999998644211
Q ss_pred --------------------------------EEEEEeecCccCeeEEEEcCC---------------------------
Q 018675 154 --------------------------------ECVSVLQGHAQDVKMVQWHPT--------------------------- 174 (352)
Q Consensus 154 --------------------------------~~~~~~~~h~~~v~~~~~~~~--------------------------- 174 (352)
..+..+.+|...|.+++| |+
T Consensus 298 ~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~ 376 (615)
T 1pgu_A 298 GNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIV 376 (615)
T ss_dssp GGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEE
T ss_pred cCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceE
Confidence 112233344444444444 32
Q ss_pred ------CCEEEEEeCCCcEEEEecCCCCC---------------------------------------------------
Q 018675 175 ------MDVLFSCSYDNTIKVWWAEDTDS--------------------------------------------------- 197 (352)
Q Consensus 175 ------~~~l~s~~~d~~i~iw~~~~~~~--------------------------------------------------- 197 (352)
+..+++++.|+.+++|++.....
T Consensus 377 ~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (615)
T 1pgu_A 377 SLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQ 456 (615)
T ss_dssp EEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECS
T ss_pred EEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcC
Confidence 44555666666666665432100
Q ss_pred ---------CCceeEe-----eee-ccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEE
Q 018675 198 ---------DNWHCVQ-----TIS-ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCT 262 (352)
Q Consensus 198 ---------~~~~~~~-----~~~-~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 262 (352)
+....+. .+. ....+|...|.+++|+|++++|++++.||.|++||++..+. ...
T Consensus 457 ~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~-----------~~~ 525 (615)
T 1pgu_A 457 NYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV-----------KTS 525 (615)
T ss_dssp SEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-----------EEC
T ss_pred CEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcc-----------eeE
Confidence 0000000 000 23456889999999999999999999999999999853321 222
Q ss_pred eecccCcceEEEEecC----------Cc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 263 ISGYHDRTIFSVHWSR----------EG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 263 ~~~~~~~~i~~~~~~~----------~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
+...|...+.+++|+| ++ ++++++.|+.+++|+..... ..+....+|...|++++|+|+++
T Consensus 526 ~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 526 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM--------KIIKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT--------CCEEETTSSTTCEEEEEEEETTE
T ss_pred eecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc--------eechhhhcCccceEEEEEcCCCC
Confidence 3333778899999998 54 89999999999999765321 23345678999999999999986
Q ss_pred ceEEEecCCCeEEEEeecc
Q 018675 332 RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 332 ~~l~s~~~Dg~i~iw~~~~ 350 (352)
|++++.||+|++|++..
T Consensus 598 --l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 598 --LVSSGADACIKRWNVVL 614 (615)
T ss_dssp --EEEEETTSCEEEEEEC-
T ss_pred --eEEecCCceEEEEeeec
Confidence 77999999999999864
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=262.03 Aligned_cols=300 Identities=15% Similarity=0.292 Sum_probs=212.9
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce-------eeeeeeeeeccee------------cceEE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR-------FWNCKAVLEEMHT------------RTVRS 79 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~-------~~~~~~~~~~~h~------------~~v~~ 79 (352)
.|.+.|++++|+|+ +.+||+|+.||.|+||++.+... .+.....+ ..|. ..|++
T Consensus 26 ~~~~~V~~v~~s~~------g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~ 98 (447)
T 3dw8_B 26 AEADIISTVEFNHS------GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINK 98 (447)
T ss_dssp CGGGSEEEEEECSS------SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEE-ECCCCEEEGGGTEEECCCCCE
T ss_pred cccCcEEEEEECCC------CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccc-ccccccccccccccccCceEE
Confidence 36899999999997 57999999999999999876541 11112222 3466 78999
Q ss_pred EEECCCC--CEEEEEeCCCcEEEEEccCCcee-------------------------------------ee-EeeccccC
Q 018675 80 CAWSPSG--KLLATASFDATTCIWEDVGGDYE-------------------------------------CV-ATLEGHEN 119 (352)
Q Consensus 80 ~~~s~~~--~~l~s~~~d~~i~i~~~~~~~~~-------------------------------------~~-~~~~~h~~ 119 (352)
++|+|++ ..|++++.|++|++|+...+... +. ....+|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 9999998 89999999999999997643211 01 11367999
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE-------EeecCccCeeEEEEcCCC-CEEEEEeCCCcEEEEe
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS-------VLQGHAQDVKMVQWHPTM-DVLFSCSYDNTIKVWW 191 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-------~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~ 191 (352)
.|++++|+|++++|++| .|++|++||+.... ..+. .+.+|...|.+++|+|++ .++++++.|+.|++|+
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 255 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCD 255 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred ceEEEEEcCCCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEE
Confidence 99999999999999998 89999999986322 2222 245788999999999998 8999999999999999
Q ss_pred cCCCCCCCceeEeeeeccCCCCc------------ccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc-cccccCCCCccce
Q 018675 192 AEDTDSDNWHCVQTISESNNGHS------------STIWALSFNAKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWR 258 (352)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~------------~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~ 258 (352)
+........ ....+ .+|. ..|.+++|+|++++|++++. +.|++||++. .+..
T Consensus 256 ~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~--------- 320 (447)
T 3dw8_B 256 MRASALCDR-HSKLF----EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV--------- 320 (447)
T ss_dssp TTTCSSSCT-TCEEE----CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS---------
T ss_pred CcCCccccc-eeeEe----ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc---------
Confidence 865431100 01112 1343 38999999999999999999 9999999864 2111
Q ss_pred eeEEeecccC------------c---ceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcc----------------
Q 018675 259 HLCTISGYHD------------R---TIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPS---------------- 306 (352)
Q Consensus 259 ~~~~~~~~~~------------~---~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~---------------- 306 (352)
..+.. |. . .++.++|++++ ++++++.|+.+++|+........-..
T Consensus 321 --~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (447)
T 3dw8_B 321 --ETYQV-HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKV 397 (447)
T ss_dssp --CCEES-CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCE
T ss_pred --ceeec-cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccc
Confidence 01111 11 1 13347888876 79999999999999876543211000
Q ss_pred -------cceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 307 -------YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 307 -------~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
...+......+...|.+++|+|++. +||+++.|+ +.+|+-
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 398 CASGKRKKDEISVDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQD 444 (447)
T ss_dssp ECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEEC
T ss_pred cccCCcccccccccccccCCceeEEEECCCCC-EEEEEecce-eeeecc
Confidence 0000011224567899999999986 678887776 777764
No 63
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-33 Score=248.35 Aligned_cols=246 Identities=20% Similarity=0.313 Sum_probs=195.0
Q ss_pred cceecceEEEEE-----CC-CCCEEEEEeCCCcEEEEEccCCc-----eeeeEeeccccCCeeEEEECCCCcEEEEeeCC
Q 018675 71 EMHTRTVRSCAW-----SP-SGKLLATASFDATTCIWEDVGGD-----YECVATLEGHENEVKSVSWNASGTLLATCGRD 139 (352)
Q Consensus 71 ~~h~~~v~~~~~-----s~-~~~~l~s~~~d~~i~i~~~~~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d 139 (352)
..|...|++++| ++ ++++|++|+.|++|++|+....+ ..+...+.+|...|.+++|+|++.++++++.|
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D 97 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD 97 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC
Confidence 459999999999 76 89999999999999999975432 23456788999999999999999999999999
Q ss_pred CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEE
Q 018675 140 KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 219 (352)
Q Consensus 140 ~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 219 (352)
++|++||+..+. ++..+.+|...|.+++|+|++.+|++++.|+.|++|++... +.... ....+|...|.+
T Consensus 98 ~~v~lwd~~~~~---~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~------~~~~~-~~~~~~~~~v~~ 167 (343)
T 2xzm_R 98 KTLRLWDLRTGT---TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE------CKFSS-AEKENHSDWVSC 167 (343)
T ss_dssp SEEEEEETTSSC---EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC------EEEEC-CTTTSCSSCEEE
T ss_pred CcEEEEECCCCc---EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC------ceeee-ecccCCCceeee
Confidence 999999997654 45667899999999999999999999999999999987531 11111 223468899999
Q ss_pred EEEcCCC----------CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCC
Q 018675 220 LSFNAKG----------DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAAD 288 (352)
Q Consensus 220 l~~~~~~----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d 288 (352)
++|+|++ .+|++++.||.|++||.+. .....+ ..|...+.+++|++++ ++++++.|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------------~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~d 234 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF------------QIRYTF-KAHESNVNHLSISPNGKYIATGGKD 234 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT------------EEEEEE-ECCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC------------ceeEEE-cCccccceEEEECCCCCEEEEEcCC
Confidence 9999987 7899999999999998431 111222 2467789999999976 89999999
Q ss_pred CeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 289 DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 289 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+.+++|+...... .... ..+...|++++|+|+++ ++ +++.|+.|++|++..
T Consensus 235 g~v~iwd~~~~~~--------~~~~-~~~~~~v~~v~~sp~~~-~l-a~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 235 KKLLIWDILNLTY--------PQRE-FDAGSTINQIAFNPKLQ-WV-AVGTDQGVKIFNLMT 285 (343)
T ss_dssp CEEEEEESSCCSS--------CSEE-EECSSCEEEEEECSSSC-EE-EEEESSCEEEEESSS
T ss_pred CeEEEEECCCCcc--------ccee-ecCCCcEEEEEECCCCC-EE-EEECCCCEEEEEeCC
Confidence 9999997632111 0111 12445699999999975 55 466688999999854
No 64
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.6e-34 Score=250.65 Aligned_cols=290 Identities=9% Similarity=0.044 Sum_probs=220.4
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATA 92 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~ 92 (352)
+....+|.+.|++++|+|+ +++|++++.|++|++|++.+......... ...|...|++++|+|+++ +|++|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~------~~~l~~~~~d~~v~iw~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPS------KSLLLITSWDGSLTVYKFDIQAKNVDLLQ--SLRYKHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp EECSSCCSSCEEEEEEEGG------GTEEEEEETTSEEEEEEEETTTTEEEEEE--EEECSSCEEEEEEEESSSEEEEEE
T ss_pred eecccCCCCcEEEEEEcCC------CCEEEEEcCCCeEEEEEeCCCCcccccee--eeecCCceEEEEECCCCCcEEEEE
Confidence 3445689999999999997 57999999999999999877652111121 135889999999999999 99999
Q ss_pred eCCCcEEEEEc-cCCceeeeEeecc--ccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe------eEEEEEeecCc
Q 018675 93 SFDATTCIWED-VGGDYECVATLEG--HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE------FECVSVLQGHA 163 (352)
Q Consensus 93 ~~d~~i~i~~~-~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~------~~~~~~~~~h~ 163 (352)
+.|+.|++|+. .++. ...+.+ |...|.+++|+| +..|++++.|+.|++||+..... ..++..+. |.
T Consensus 76 ~~dg~i~~wd~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~ 150 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VK 150 (342)
T ss_dssp ETTSCEEEECSSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SC
T ss_pred cCCCeEEEEEeccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eC
Confidence 99999999998 7654 356677 999999999999 99999999999999999864000 11222333 77
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEecCC-CCCCCceeEeeeeccCCCCcccEEEEEEcC-CCCEEEEEeCCCcEEEE
Q 018675 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAED-TDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~-~~~~l~s~~~dg~i~iw 241 (352)
..+.+++|+|++ +++++.|+.|++|++.. ... .. .. ....|...|.+++|+| ++.++++++.||.|++|
T Consensus 151 ~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~-~~---~~---~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 151 NKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD-NG---TI---EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221 (342)
T ss_dssp CCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC-CC---EE---EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred CceEEEEecCCc--EEEEeCCCeEEEEECCccccc-cc---ee---eecCCCCceeEEEECCCCCCEEEEEecCCcEEEE
Confidence 889999999886 89999999999999865 221 11 11 1125778899999999 99999999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecc--------cCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeee
Q 018675 242 GADITRMQSGDGYASWRHLCTISGY--------HDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLK 312 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 312 (352)
+++...... .......+... +...+.+++|++++ ++++++.|+.+++|+.... ..+.
T Consensus 222 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~---------~~~~ 287 (342)
T 1yfq_A 222 FFDDQGDDY-----NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR---------KKIK 287 (342)
T ss_dssp ECCTTCCST-----TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT---------EEEE
T ss_pred EEcCCCccc-----ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH---------hHhh
Confidence 886430000 00111112211 23479999999865 7999999999999976432 2334
Q ss_pred ccccc-CcceeEEEecCCCcceEEEecCCCe
Q 018675 313 KEKAH-DMDVNSVQWSPGERRLLASASDDGM 342 (352)
Q Consensus 313 ~~~~h-~~~i~~~~~sp~~~~~l~s~~~Dg~ 342 (352)
...+| ...|++++ |+++ +|++++.||+
T Consensus 288 ~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~ 315 (342)
T 1yfq_A 288 NFAKFNEDSVVKIA--CSDN-ILCLATSDDT 315 (342)
T ss_dssp ECCCCSSSEEEEEE--ECSS-EEEEEEECTH
T ss_pred hhhcccCCCceEec--CCCC-eEEEEecCCc
Confidence 46677 99999999 8876 6889999998
No 65
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-34 Score=282.49 Aligned_cols=322 Identities=12% Similarity=0.148 Sum_probs=214.5
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeee-------------eecceecceEEEEE
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV-------------LEEMHTRTVRSCAW 82 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~-------------~~~~h~~~v~~~~~ 82 (352)
.+.+|.+.|++++|+|++ ...+++|+.|++| +||+.+.......... ....|...|++++|
T Consensus 146 ~~~~h~~~V~sl~~sp~~-----~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRD-----IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp CSSSCCCCCCEEEEETTE-----EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred ccccCCCCeEEEEEccCC-----CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 457899999999999964 3689999999999 9999876533222110 01224578999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCceeeeEee---cc-------------ccCCeeEEEEC----CCC-cEEEEeeCCC-
Q 018675 83 SPSGKLLATASFDATTCIWEDVGGDYECVATL---EG-------------HENEVKSVSWN----ASG-TLLATCGRDK- 140 (352)
Q Consensus 83 s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~---~~-------------h~~~v~~v~~~----~~~-~~l~s~~~d~- 140 (352)
+|+|++|++|+.|++|++||..+++......+ .. |...|++++|+ |++ .+|++|+.|.
T Consensus 220 spdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~ 299 (902)
T 2oaj_A 220 HPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISR 299 (902)
T ss_dssp CTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTT
T ss_pred cCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCC
Confidence 99999999999999999999877643221122 11 34578999995 433 4566665542
Q ss_pred ----cEEEEec---------------------------------------------------------------------
Q 018675 141 ----SVWIWEV--------------------------------------------------------------------- 147 (352)
Q Consensus 141 ----~v~vwd~--------------------------------------------------------------------- 147 (352)
.+++|++
T Consensus 300 ~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~ 379 (902)
T 2oaj_A 300 GDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETM 379 (902)
T ss_dssp SSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEE
T ss_pred CCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEE
Confidence 5555552
Q ss_pred --CCCCeeEE-----------------E---------------------EEeecCccCeeEEEEcCCCCEEEEEeCCCcE
Q 018675 148 --MPGNEFEC-----------------V---------------------SVLQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187 (352)
Q Consensus 148 --~~~~~~~~-----------------~---------------------~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 187 (352)
..+..... + ..+.+|...+..++|+|++++|++|+.|++|
T Consensus 380 ~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtV 459 (902)
T 2oaj_A 380 LYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSV 459 (902)
T ss_dssp ETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEE
T ss_pred ECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcE
Confidence 11100000 0 0011223333344567888999999999999
Q ss_pred EEEecCCCCCCCceeEee-e-eccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc--------C------
Q 018675 188 KVWWAEDTDSDNWHCVQT-I-SESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS--------G------ 251 (352)
Q Consensus 188 ~iw~~~~~~~~~~~~~~~-~-~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--------~------ 251 (352)
++||+............. + .....+|...|++|+|+|++++||+|+.||+|++|++...+... .
T Consensus 460 rlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~ 539 (902)
T 2oaj_A 460 RIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFR 539 (902)
T ss_dssp EEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CC
T ss_pred EEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeee
Confidence 999987643211110100 0 00112788999999999999999999999999999976432100 0
Q ss_pred --------CC------------CccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceee
Q 018675 252 --------DG------------YASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLL 311 (352)
Q Consensus 252 --------~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~ 311 (352)
.. .........+. .|...|.+++++|+++||+|+.|++|++|+.....+.. ...+
T Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~~~~----~~~~ 614 (902)
T 2oaj_A 540 RFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-ANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPAIIY----MENI 614 (902)
T ss_dssp SCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-CCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTEEEE----EEEG
T ss_pred eccccCCccccccccccCCCCCCCccceeEEEE-cCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCeEEE----Eeeh
Confidence 00 00011123333 37889999999999999999999999999764322110 0011
Q ss_pred eccc-ccCcceeEEEec-----CCC--cceEEEecCCCeEEEEee
Q 018675 312 KKEK-AHDMDVNSVQWS-----PGE--RRLLASASDDGMIKIWEL 348 (352)
Q Consensus 312 ~~~~-~h~~~i~~~~~s-----p~~--~~~l~s~~~Dg~i~iw~~ 348 (352)
.... +|...|++++|+ ||+ .+.|++|+.|++|++|++
T Consensus 615 ~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 615 REISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp GGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred hHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 2343 899999999999 886 246899999999999998
No 66
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-33 Score=244.76 Aligned_cols=247 Identities=28% Similarity=0.534 Sum_probs=196.9
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
..|...|++++|+|++++|++|+.|+.+++|+..+++ ....+.+|...|.+++|+|++++|++++.|++|++||+..+
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence 4588999999999999999999999999999987664 45667899999999999999999999999999999999765
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
. ++..+.+|...+.++.|+|++.++++++.|+.|++|++... .+...+ ..|..+|.+++|+|++.+|+
T Consensus 98 ~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~----~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 98 K---CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-----KCLKTL----PAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp C---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-----CEEEEE----CCCSSCEEEEEECTTSSEEE
T ss_pred c---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-----EEEEEe----cCCCCcEEEEEEcCCCCEEE
Confidence 4 45677889999999999999999999999999999987643 223333 36888999999999999999
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccce
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
+++.||.|++||++..+ ....+...+...+..+.+++++ ++++++.|+.+++|+.... .
T Consensus 166 ~~~~d~~i~~wd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---------~ 225 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQ-----------CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---------K 225 (312)
T ss_dssp EEETTSCEEEEETTTCC-----------EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT---------E
T ss_pred EEeCCCcEEEEECCCCc-----------eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC---------c
Confidence 99999999999975321 1222223345668889999876 7899999999999976532 1
Q ss_pred eeecccccCccee--EEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 310 LLKKEKAHDMDVN--SVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 310 ~~~~~~~h~~~i~--~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.+....+|...+. ...+++.+..+|++|+.||.|++||+..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 226 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 2233445544332 33454433457889999999999998653
No 67
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.8e-33 Score=246.45 Aligned_cols=252 Identities=21% Similarity=0.350 Sum_probs=202.6
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeee-eeeeeecceecceEEEEECCCCCEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN-CKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
....+..|...|.+++|+|+ +.++++++.|+.+++|++........ ........|...|.+++|+|+++.|++
T Consensus 98 ~~~~~~~~~~~v~~~~~sp~------g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t 171 (354)
T 2pbi_B 98 KEHAVTMPCTWVMACAYAPS------GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILT 171 (354)
T ss_dssp EEEEEECSSSCCCEEEECTT------SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEE
T ss_pred cceEEecCCCCEEEEEECCC------CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEE
Confidence 34567789999999999997 57999999999999998754321000 011112358899999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC--CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
++.|++|++||..+++ ++..+.+|...|.+++|+| ++++|++|+.|++|++||++.+. ++..+.+|...|.++
T Consensus 172 ~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~---~~~~~~~h~~~v~~v 246 (354)
T 2pbi_B 172 ASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ---CVQAFETHESDVNSV 246 (354)
T ss_dssp EETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEE
T ss_pred EeCCCcEEEEeCCCCe--EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc---EEEEecCCCCCeEEE
Confidence 9999999999987764 5677889999999999987 46899999999999999997654 456778899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccc
Q 018675 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQ 249 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (352)
+|+|++..+++++.|+.|++||+.... ....+. ...+...+.+++|+|++.+|++|+.|+.|++||+....
T Consensus 247 ~~~p~~~~l~s~s~D~~v~lwd~~~~~-----~~~~~~--~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~-- 317 (354)
T 2pbi_B 247 RYYPSGDAFASGSDDATCRLYDLRADR-----EVAIYS--KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS-- 317 (354)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTE-----EEEEEC--CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS--
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCc-----EEEEEc--CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc--
Confidence 999999999999999999999876431 122221 12334578999999999999999999999999974321
Q ss_pred cCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEE
Q 018675 250 SGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFF 294 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~ 294 (352)
....+ ..|...+.+++|+|++ ++++++.|+++++|
T Consensus 318 ---------~~~~l-~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 318 ---------RVSIL-FGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp ---------EEEEE-CCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred ---------eEEEE-ECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 12222 2477889999999986 79999999999999
No 68
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1e-33 Score=289.52 Aligned_cols=303 Identities=25% Similarity=0.420 Sum_probs=238.5
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l 89 (352)
..+.++.+|.+.|++++|+|+ ++++++++.|++|++|++.+++.... + ..|...|.+++|+| ++.++
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~------~~~l~s~~~d~~v~vwd~~~~~~~~~----~-~~~~~~v~~~~~~~~~~~~~l 716 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSD------DSYIATCSADKKVKIWDSATGKLVHT----Y-DEHSEQVNCCHFTNKSNHLLL 716 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTT------SSEEEEEETTSEEEEEETTTCCEEEE----E-ECCSSCEEEEEECSSSSCCEE
T ss_pred CEEEEeccCCCCEEEEEEecC------CCEEEEEeCCCeEEEEECCCCceEEE----E-cCCCCcEEEEEEecCCCceEE
Confidence 446678899999999999997 57999999999999999988754322 2 34889999999999 55689
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCee----------------
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF---------------- 153 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~---------------- 153 (352)
++|+.|+.+++||..++. +...+.+|.+.|++++|+|++++|++++.|++|++||+..+...
T Consensus 717 ~sg~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 794 (1249)
T 3sfz_A 717 ATGSNDFFLKLWDLNQKE--CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPP 794 (1249)
T ss_dssp EEEETTSCEEEEETTSSS--EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-------
T ss_pred EEEeCCCeEEEEECCCcc--hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcc
Confidence 999999999999987764 56677899999999999999999999999999999997533110
Q ss_pred ------------------------------------------------------------------------------EE
Q 018675 154 ------------------------------------------------------------------------------EC 155 (352)
Q Consensus 154 ------------------------------------------------------------------------------~~ 155 (352)
..
T Consensus 795 ~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 795 EDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK 874 (1249)
T ss_dssp -CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE
T ss_pred ccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 11
Q ss_pred EEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCC--------------------------------------
Q 018675 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-------------------------------------- 197 (352)
Q Consensus 156 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~-------------------------------------- 197 (352)
+..+.+|...|.+++|+|++..+++++.|+.+++|+......
T Consensus 875 ~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1249)
T 3sfz_A 875 VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTG 954 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSC
T ss_pred eeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcc
Confidence 223456778899999999999999999999999998532000
Q ss_pred ------------------CCcee---------Ee-----eeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 198 ------------------DNWHC---------VQ-----TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 198 ------------------~~~~~---------~~-----~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
..+.. +. .......+|...|.+++|+|++++|++++.||.|++|++..
T Consensus 955 ~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 955 QIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp CEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred eEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 00000 00 00011246888999999999999999999999999999764
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEE
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 325 (352)
.... ....+...+.++.+++++.+++++.|+.+++|+..... ......+|...|++++
T Consensus 1035 ~~~~-------------~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---------~~~~~~~~~~~v~~~~ 1092 (1249)
T 3sfz_A 1035 GDYV-------------FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR---------IERDFTCHQGTVLSCA 1092 (1249)
T ss_dssp TEEE-------------CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTC---------CCEEEECCSSCCCCEE
T ss_pred CceE-------------EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCc---------eeEEEcccCCcEEEEE
Confidence 3221 11246678999999999999999999999999765432 2334568999999999
Q ss_pred ecCCCcceEEEecCCCeEEEEeecc
Q 018675 326 WSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 326 ~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|+|+++ +|++++.||+|++|++..
T Consensus 1093 ~s~d~~-~l~s~s~d~~v~iwd~~~ 1116 (1249)
T 3sfz_A 1093 ISSDAT-KFSSTSADKTAKIWSFDL 1116 (1249)
T ss_dssp ECSSSS-SCEEECCSSCCCEECSSS
T ss_pred ECCCCC-EEEEEcCCCcEEEEECCC
Confidence 999986 578999999999999864
No 69
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.6e-33 Score=246.66 Aligned_cols=301 Identities=18% Similarity=0.234 Sum_probs=220.5
Q ss_pred ccceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC
Q 018675 8 NYELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK 87 (352)
Q Consensus 8 ~~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 87 (352)
..+...+..+.+|.+.|++++|+|+.. .+.+|++|+.|+.|++|++.+..... .. ....|...|++++|+|+++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~---~g~~l~~~~~dg~i~iw~~~~~~~~~--~~-~~~~h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTL---PGNFLIAGSWANDVRCWEVQDSGQTI--PK-AQQMHTGPVLDVCWSDDGS 99 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTS---SSEEEEEEETTSEEEEEEECTTSCEE--EE-EEEECSSCEEEEEECTTSS
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCC---CceEEEEECCCCcEEEEEcCCCCcee--EE-EeccccCCEEEEEECcCCC
Confidence 335567788899999999999999731 13799999999999999998633211 11 2245889999999999999
Q ss_pred EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEE--CCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC
Q 018675 88 LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSW--NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
+|++++.|+.+++||..++.. . .+.+|...|++++| +|++.+|++++.|++|++||+..+.. +..+..+. .
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~--~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~-~ 172 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQA--I-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP---MMVLQLPE-R 172 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEE--E-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC---SEEEECSS-C
T ss_pred EEEEEcCCCcEEEEEcCCCCc--e-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE---EEEEecCC-C
Confidence 999999999999999877642 2 35579999999999 89999999999999999999976653 33444443 5
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE----EEEEeCCCcEEEE
Q 018675 166 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK----LVSCSDDLTIKIW 241 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~----l~s~~~dg~i~iw 241 (352)
+.++.+.+ ..+++++.++.+.+|++..... ..... .. .+...+.++.+.++... +++++.||.|++|
T Consensus 173 ~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~----~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 173 CYCADVIY--PMAVVATAERGLIVYQLENQPS----EFRRI-ES--PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp EEEEEEET--TEEEEEEGGGCEEEEECSSSCE----EEEEC-CC--SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred ceEEEecC--CeeEEEeCCCcEEEEEeccccc----hhhhc-cc--cccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence 56666654 4788999999999998765321 11111 11 23344555555554443 9999999999999
Q ss_pred cCCccccccCCCCccceeeEEeec-----------ccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccce
Q 018675 242 GADITRMQSGDGYASWRHLCTISG-----------YHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
+++..... .....+.. .+...+.+++|++++ ++++++.|+.+++|+.... .
T Consensus 244 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~---------~ 306 (368)
T 3mmy_A 244 YINPPNPA--------KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR---------T 306 (368)
T ss_dssp ESSCSCHH--------HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT---------E
T ss_pred ecCCCCcc--------ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC---------c
Confidence 98643210 00111111 122369999999976 8999999999999976432 2
Q ss_pred eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.+....+|...|++++|+|+++ +|++++.|+..+.|++
T Consensus 307 ~~~~~~~~~~~v~~~~~s~~g~-~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 307 KLKTSEQLDQPISACCFNHNGN-IFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEECCCCSSCEEEEEECTTSS-CEEEEECCCSTTCGGG
T ss_pred EEEEecCCCCCceEEEECCCCC-eEEEEecccccccccc
Confidence 3445678999999999999986 5789998886666554
No 70
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-32 Score=248.42 Aligned_cols=245 Identities=23% Similarity=0.405 Sum_probs=191.7
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
.|++++|+|+ +++|++|+.|++|++|++.+++.. ..+ ..|...|++++|+|+++.|++|+.|+++++||
T Consensus 125 ~v~~v~~s~d------g~~l~s~~~d~~i~iwd~~~~~~~----~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 125 YIRSVCFSPD------GKFLATGAEDRLIRIWDIENRKIV----MIL-QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp BEEEEEECTT------SSEEEEEETTSCEEEEETTTTEEE----EEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEECCC------CCEEEEEcCCCeEEEEECCCCcEE----EEE-ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence 4999999997 579999999999999999876432 122 45889999999999999999999999999999
Q ss_pred ccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEE----EEeecCccCeeEEEEcCCCCE
Q 018675 103 DVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECV----SVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 103 ~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~ 177 (352)
..+++ +...+. +...+.+++|+| ++.+|++++.|++|++||+..+.....+ ....+|...|.+++|+|++.+
T Consensus 194 ~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~ 270 (393)
T 1erj_A 194 LRTGQ--CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS 270 (393)
T ss_dssp TTTTE--EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE
T ss_pred CCCCe--eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE
Confidence 87764 333443 567899999999 8999999999999999998765432222 112578899999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCC-------CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 178 LFSCSYDNTIKVWWAEDTDSD-------NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~-------~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
|++++.|+.|++|++...... ...+... ..+|...|.+++|+|++.+|++|+.|+.|++||.+..+
T Consensus 271 l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~--- 343 (393)
T 1erj_A 271 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVT----YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN--- 343 (393)
T ss_dssp EEEEETTSEEEEEEC---------------CEEEE----EECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC---
T ss_pred EEEEeCCCEEEEEECCCCCCcccccCCCCCcceEE----EecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe---
Confidence 999999999999998653211 0111222 23788999999999999999999999999999975321
Q ss_pred CCCCccceeeEEeecccCcceEEEEecC-------CceEEecCCCCeEEEEEcc
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSR-------EGIIASGAADDSVQFFVES 297 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~~s~~~d~~v~~~~~~ 297 (352)
....+. .|...+.++++++ ..++++++.|+++++|...
T Consensus 344 --------~~~~l~-~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 344 --------PLLMLQ-GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp --------EEEEEE-CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred --------EEEEEC-CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 222332 4777899999876 3489999999999999653
No 71
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.5e-33 Score=263.63 Aligned_cols=255 Identities=18% Similarity=0.307 Sum_probs=199.6
Q ss_pred eeeeeecCCccc-eEEEEEcc--CCCCCCCccEEEEeeCCCeEEEEecCCCce----eeeeeeeeecceecceEEEEECC
Q 018675 12 REIQTLEGHTDR-VWSLAWKP--TAGVDGVAPVFASCSGDKTVRIWEQSASSR----FWNCKAVLEEMHTRTVRSCAWSP 84 (352)
Q Consensus 12 ~~~~~~~gH~~~-V~~i~~~p--~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~----~~~~~~~~~~~h~~~v~~~~~s~ 84 (352)
.....+.+|.+. |++++|+| + +++|++++.|++|++|++.++.. .......+ ..|...|.+++|+|
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~------~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~ 126 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKG------SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF-QVLAGPISDISWDF 126 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTT------CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE-ECCSSCEEEEEECT
T ss_pred ccceEEecCCCceEEEEEECcCCC------CCEEEEecCCCEEEEEeCCCCcccccccccccchh-hcccccEEEEEEeC
Confidence 456778899999 99999999 6 57999999999999999864310 01111222 34788999999999
Q ss_pred CCCEEEEEeCC----CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEe
Q 018675 85 SGKLLATASFD----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVL 159 (352)
Q Consensus 85 ~~~~l~s~~~d----~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 159 (352)
++++|++++.+ +.+.+|+ .+ .....+.+|...|++++|+|++. ++++++.|+.|++||+... +.+..+
T Consensus 127 ~~~~l~~~~~~~~~~~~v~~~d--~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~---~~~~~~ 199 (615)
T 1pgu_A 127 EGRRLCVVGEGRDNFGVFISWD--SG--NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF---KFSASD 199 (615)
T ss_dssp TSSEEEEEECCSSCSEEEEETT--TC--CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB---EEEEEE
T ss_pred CCCEEEEeccCCCCccEEEEEE--CC--CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc---ceeeee
Confidence 99999999988 6888887 33 34667789999999999999998 8999999999999998644 456677
Q ss_pred ecCcc---CeeEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC
Q 018675 160 QGHAQ---DVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235 (352)
Q Consensus 160 ~~h~~---~v~~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d 235 (352)
.+|.. .|.+++|+|+ +.++++++.|+.|++|++.... ....+.....+|...|.+++|+ ++.+|++++.|
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 200 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE-----FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC-----EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC-----EeEEecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence 88988 8999999999 9999999999999999875432 2222211111688999999999 99999999999
Q ss_pred CcEEEEcCCccccccCCCCccceeeEEeec---ccCcceEEEEecCCceEEecCCCCeEEEEEcc
Q 018675 236 LTIKIWGADITRMQSGDGYASWRHLCTISG---YHDRTIFSVHWSREGIIASGAADDSVQFFVES 297 (352)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~ 297 (352)
|.|++||++..+. ...+.. .....+.++.++.+.++++++.|+.+++|+..
T Consensus 274 ~~i~~wd~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 274 ATIRVWDVTTSKC-----------VQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp SEEEEEETTTTEE-----------EEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred CcEEEEECCCCcE-----------EEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECC
Confidence 9999999763221 111111 12345667777777799999999999999754
No 72
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-33 Score=254.42 Aligned_cols=292 Identities=20% Similarity=0.331 Sum_probs=216.7
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-CCCEEEEEeCCCcEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLLATASFDATTCIW 101 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~i~ 101 (352)
....++++|.. ..++++++.||.|+||++........... ....|...|++++|+| ++++|++|+.|++|++|
T Consensus 36 ~~~~~~~~~~~-----~~~~~~~~~~g~i~v~~~~~~~~~~~~~~-~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw 109 (402)
T 2aq5_A 36 DSGFCAVNPKF-----MALICEASGGGAFLVLPLGKTGRVDKNVP-LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVW 109 (402)
T ss_dssp SSCSEEECSSE-----EEEEBCCSSSCCEEEEETTCCEECCTTCC-CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred CCCcEEECCCe-----EEEEEEEcCCCEEEEEECccCCCCCCCCc-eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 34457777753 23555688999999999865432211111 1245899999999999 99999999999999999
Q ss_pred EccCCce-----eeeEeeccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEe--ecCccCeeEEEEcC
Q 018675 102 EDVGGDY-----ECVATLEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVL--QGHAQDVKMVQWHP 173 (352)
Q Consensus 102 ~~~~~~~-----~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~ 173 (352)
+..++.. .+...+.+|...|.+++|+|++ ++|++++.|++|++||+..+ .++..+ .+|...|.+++|+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 110 EIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG---AAVLTLGPDVHPDTIYSVDWSR 186 (402)
T ss_dssp ECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT---EEEEEECTTTCCSCEEEEEECT
T ss_pred EccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC---CccEEEecCCCCCceEEEEECC
Confidence 9876532 3456778999999999999998 69999999999999999755 345566 67999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCccc-EEEEEEcCCCCEEEEE---eCCCcEEEEcCCccccc
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST-IWALSFNAKGDKLVSC---SDDLTIKIWGADITRMQ 249 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~l~~~~~~~~l~s~---~~dg~i~iwd~~~~~~~ 249 (352)
++.+|++++.|+.|++|++... .....+. .+|... +.++.|+|++.+|++| +.|+.|++||++....
T Consensus 187 ~~~~l~~~~~d~~i~iwd~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~- 257 (402)
T 2aq5_A 187 DGALICTSCRDKRVRVIEPRKG-----TVVAEKD---RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE- 257 (402)
T ss_dssp TSSCEEEEETTSEEEEEETTTT-----EEEEEEE---CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS-
T ss_pred CCCEEEEEecCCcEEEEeCCCC-----ceeeeec---cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC-
Confidence 9999999999999999987643 2233321 245554 8899999999999999 7999999999864221
Q ss_pred cCCCCccceeeEEeecccCcceEEEEecCCc-eE-EecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEec
Q 018675 250 SGDGYASWRHLCTISGYHDRTIFSVHWSREG-II-ASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 327 (352)
........+...+..+.+++++ ++ ++++.|+.+++|+...... ....+.. ..|...|++++|+
T Consensus 258 ---------~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~-----~~~~l~~-~~~~~~v~~~~~s 322 (402)
T 2aq5_A 258 ---------PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP-----FLHYLSM-FSSKESQRGMGYM 322 (402)
T ss_dssp ---------CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT-----CEEEEEE-ECCSSCCSEEEEC
T ss_pred ---------CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc-----ceEeecc-cccCCcccceEEe
Confidence 0111122245668889999876 45 4677899999997754321 0111122 2367899999999
Q ss_pred CCCcceEEEecCCCeEEEEeecc
Q 018675 328 PGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 328 p~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
|++. +++ +.|+.+++|++..
T Consensus 323 p~~~-~~~--s~~~~~~~~~l~~ 342 (402)
T 2aq5_A 323 PKRG-LEV--NKCEIARFYKLHE 342 (402)
T ss_dssp CGGG-SCG--GGTEEEEEEEEET
T ss_pred cccc-cce--ecceeEEEEEcCC
Confidence 9875 453 4577999999864
No 73
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=274.21 Aligned_cols=264 Identities=24% Similarity=0.412 Sum_probs=207.3
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CCEEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GKLLAT 91 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s 91 (352)
+..+.||.+.|++++|+|+ +++|++|+.||+|++|+...... .....+ ..|..+|++++|+|+ +++|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~d------g~~latg~~dg~I~vwd~~~~~~--~~~~~l-~~h~~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYY------GKRLATCSSDKTIKIFEVEGETH--KLIDTL-TGHEGPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp ------CCCCEEEECCCSS------SCCEEEEETTTEEEEEEEETTEE--EEEEEE-CCCSSCEEEEEECCTTSCSEEEE
T ss_pred eeecccCcceeEEEEECCC------CCeEEEEECCCcEEEEecCCCCC--ccceec-cCCcCceEEEEecCCCCCCEEEE
Confidence 4568899999999999997 47899999999999999874321 112222 458899999999988 999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~ 169 (352)
|+.||.|++||..++.......+.+|...|++++|+|+ +..+++|+.|++|++||+...... ....+.+|...|.++
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~-~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVNSA 151 (753)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-CCEEEECCSSCEEEE
T ss_pred EeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-ceeEeecCCCceEEE
Confidence 99999999999988765567788899999999999999 999999999999999998765322 233567899999999
Q ss_pred EEcC-------------CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC---CCEEEEEe
Q 018675 170 QWHP-------------TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK---GDKLVSCS 233 (352)
Q Consensus 170 ~~~~-------------~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~---~~~l~s~~ 233 (352)
.|+| ++..+++|+.|+.|++|++..... ...... ...+|...|.+++|+|+ +.+|++|+
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~-~~~~~~----~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-TYVLES----TLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp EECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT-EEEEEE----EECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc-cceeee----eecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 9999 488999999999999998865321 112222 23478999999999999 89999999
Q ss_pred CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeec
Q 018675 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313 (352)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
.||.|++||++..... .......
T Consensus 227 ~Dg~I~iwd~~~~~~~---------------------------------------------------------~~~~~~~ 249 (753)
T 3jro_A 227 QDRTCIIWTQDNEQGP---------------------------------------------------------WKKTLLK 249 (753)
T ss_dssp SSSCEEEEEESSSSSC---------------------------------------------------------CBCCBSS
T ss_pred cCCEEEEecCCCCCCc---------------------------------------------------------ceeEEec
Confidence 9999999986421000 0000112
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..+|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 250 ~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 250 EEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCCS
T ss_pred cCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecCC
Confidence 346788999999999986 678999999999999863
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.8e-32 Score=249.74 Aligned_cols=286 Identities=24% Similarity=0.381 Sum_probs=220.7
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEEC--CCCCEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWS--PSGKLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s--~~~~~l 89 (352)
+.+.++.+|.+.|++++|+|+ ..+++|+.|++|++|++.++.... .+ ..|...|.+++|+ ++++++
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~-------~~l~s~s~dg~i~vwd~~~~~~~~----~~-~~h~~~v~~l~~~~~~~~~~l 220 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHG-------GILVSGSTDRTVRVWDIKKGCCTH----VF-EGHNSTVRCLDIVEYKNIKYI 220 (464)
T ss_dssp EEEEEECCCSSCEEEEEECST-------TEEEEEETTSCEEEEETTTTEEEE----EE-CCCSSCEEEEEEEESSSCEEE
T ss_pred cEEEEEeCCCcCEEEEEEcCC-------CEEEEEeCCCCEEEEECCCCcEEE----EE-CCCCCccEEEEEecCCCCCEE
Confidence 456778899999999999986 389999999999999998764322 22 3588999999998 578999
Q ss_pred EEEeCCCcEEEEEccCCcee---------------------eeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC
Q 018675 90 ATASFDATTCIWEDVGGDYE---------------------CVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~---------------------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~ 148 (352)
++|+.|+++++||..+.... ....+.+|...|.++ +++++++++++.|++|++||+.
T Consensus 221 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~ 298 (464)
T 3v7d_B 221 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVA 298 (464)
T ss_dssp EEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETT
T ss_pred EEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECC
Confidence 99999999999997654321 244667888888887 5778999999999999999987
Q ss_pred CCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 149 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
.+ .++..+.+|...+.++.|+|++..+++++.|+.|++|++... .+...+ .+|...|.++.|+ +.+
T Consensus 299 ~~---~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-----~~~~~~----~~h~~~v~~~~~~--~~~ 364 (464)
T 3v7d_B 299 QM---KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG-----ELMYTL----QGHTALVGLLRLS--DKF 364 (464)
T ss_dssp TT---EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-----EEEEEE----CCCSSCEEEEEEC--SSE
T ss_pred CC---cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-----cEEEEE----eCCCCcEEEEEEc--CCE
Confidence 54 456677889999999999999999999999999999987543 233333 3688999999997 579
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
|++++.||.|++||++.... ... ..+...+..+.+++++ ++++++ |+.+++|+.....+
T Consensus 365 l~s~s~dg~v~vwd~~~~~~-----------~~~--~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~------ 424 (464)
T 3v7d_B 365 LVSAAADGSIRGWDANDYSR-----------KFS--YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKL------ 424 (464)
T ss_dssp EEEEETTSEEEEEETTTCCE-----------EEE--EECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCE------
T ss_pred EEEEeCCCcEEEEECCCCce-----------eee--ecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcE------
Confidence 99999999999999763211 111 1234445556666665 566665 99999997654321
Q ss_pred ceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 308 KMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 308 ~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+.....+|...|++++|++ +.++++++.||.+.+|-+.
T Consensus 425 --~~~~~~~~~~~v~~v~~~~--~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 425 --VHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp --EESCTTTTCSEEEEEEEET--TEEEEEEEETTEEEEEEEE
T ss_pred --EehhhccCCCcEEEEEecC--CEEEEEEEeCCeEEEEEee
Confidence 2222457889999999973 4678888889887776554
No 75
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=272.02 Aligned_cols=213 Identities=12% Similarity=0.188 Sum_probs=168.2
Q ss_pred cceeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCE
Q 018675 9 YELREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 9 ~~~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 88 (352)
|...... ..||.+.|++++|+|+ +.+||+|+.||+|+||+....... ....|...|.+++|+| |++
T Consensus 6 ~~~~~~~-~~gh~~~V~~lafspd------g~~lAsgs~Dg~I~lw~~~~~~~~------~~~~~~~~V~~l~fsp-g~~ 71 (902)
T 2oaj_A 6 FSLAETN-KYGMSSKPIAAAFDFT------QNLLAIATVTGEVHIYGQQQVEVV------IKLEDRSAIKEMRFVK-GIY 71 (902)
T ss_dssp EEEEEEE-EEECSSCEEEEEEETT------TTEEEEEETTSEEEEECSTTCEEE------EECSSCCCEEEEEEET-TTE
T ss_pred eeecccc-ccCCCCCcEEEEECCC------CCEEEEEeCCCEEEEEeCCCcEEE------EEcCCCCCEEEEEEcC-CCE
Confidence 3334443 3499999999999997 579999999999999998654321 1123678999999999 889
Q ss_pred EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEE---------EEe
Q 018675 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV---------SVL 159 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~---------~~~ 159 (352)
|++++.|++|++||..+++ ++..+. |.+.|++++|+|++++|++|+.|++|++||+..+... .. ..+
T Consensus 72 L~S~s~D~~v~lWd~~~~~--~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~ 147 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQK--VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFP 147 (902)
T ss_dssp EEEEETTCEEEEEETTTCS--EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCS
T ss_pred EEEEECcCeEEEEECCCCc--EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceecccccccccc
Confidence 9999999999999987764 344454 6789999999999999999999999999998754321 11 123
Q ss_pred ecCccCeeEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeec--------------cCCCCcccEEEEEEcC
Q 018675 160 QGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE--------------SNNGHSSTIWALSFNA 224 (352)
Q Consensus 160 ~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~--------------~~~~h~~~i~~l~~~~ 224 (352)
.+|...|++++|+|+ ...+++|+.|+.| +||+... .....+.. ....|...|.+++|+|
T Consensus 148 ~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 148 AARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN-----EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp SSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT-----EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred ccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC-----ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 578889999999996 4688999999999 9987653 22222221 1124567899999999
Q ss_pred CCCEEEEEeCCCcEEEEcCCc
Q 018675 225 KGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 225 ~~~~l~s~~~dg~i~iwd~~~ 245 (352)
+|.+|++++.||.|++||++.
T Consensus 222 dg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 222 NSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp TSSEEEEEETTCCEEEEETTT
T ss_pred CCCEEEEEECCCeEEEEECCC
Confidence 999999999999999999864
No 76
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.8e-33 Score=254.16 Aligned_cols=274 Identities=20% Similarity=0.416 Sum_probs=207.4
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce------eeeeeeeeecceecceEEEEECCCCC-
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR------FWNCKAVLEEMHTRTVRSCAWSPSGK- 87 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~------~~~~~~~~~~~h~~~v~~~~~s~~~~- 87 (352)
..+.+|.+.|++++|+|+. +.+||+++.||.|++|++..... .......+ ..|...|++++|+|+++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~-----~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQN-----ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL-RGHQKEGYGLSWNPNLNG 195 (430)
T ss_dssp EEEEEESSCCSEEEEETTE-----EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE-ECCSSCCCCEEECTTSTT
T ss_pred EEEEcCCCcEEEEEECCCC-----CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe-cCCCCCeEEEEeCCCCCC
Confidence 4456899999999999963 46899999999999999865200 00111112 35888999999999998
Q ss_pred EEEEEeCCCcEEEEEccCCce-----eeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec
Q 018675 88 LLATASFDATTCIWEDVGGDY-----ECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG 161 (352)
Q Consensus 88 ~l~s~~~d~~i~i~~~~~~~~-----~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 161 (352)
+|++|+.||.|++|+...+.. .....+.+|...|.+++|+| ++.+|++++.|+.|++||++.......+..+..
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 999999999999999865321 12345678999999999999 678999999999999999986532334555678
Q ss_pred CccCeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEeCCCcEE
Q 018675 162 HAQDVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLTIK 239 (352)
Q Consensus 162 h~~~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~~dg~i~ 239 (352)
|...+++++|+|++. ++++|+.|+.|++|++..... .+..+ .+|...|.+++|+|++. +|++++.||.|+
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~----~~~~~----~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL----KLHSF----ESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS----CSEEE----ECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC----CeEEe----ecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 999999999999887 788999999999999865321 12222 25888999999999985 689999999999
Q ss_pred EEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCc
Q 018675 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 319 (352)
+||+....... . . .. ..+ ....++....+|..
T Consensus 348 iwd~~~~~~~~----~---------~-~~-----------------~~~-----------------~~~~~~~~~~~h~~ 379 (430)
T 2xyi_A 348 VWDLSKIGEEQ----S---------T-ED-----------------AED-----------------GPPELLFIHGGHTA 379 (430)
T ss_dssp EEEGGGTTCCC----C---------H-HH-----------------HHH-----------------CCTTEEEECCCCSS
T ss_pred EEeCCCCcccc----C---------c-cc-----------------ccc-----------------CCcceEEEcCCCCC
Confidence 99875311000 0 0 00 000 00112234567889
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.|++++|+|+++.+|++++.||.|+||++..
T Consensus 380 ~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 380 KISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 9999999999876899999999999999864
No 77
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.1e-34 Score=254.78 Aligned_cols=263 Identities=21% Similarity=0.332 Sum_probs=203.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeee--eeeeeecceecceEEEEECCCC-CE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN--CKAVLEEMHTRTVRSCAWSPSG-KL 88 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~--~~~~~~~~h~~~v~~~~~s~~~-~~ 88 (352)
..+.++.+|...|.+++|+|+ +++|++|+.|+++++|++.+...... ........|...|.++.|.|++ ..
T Consensus 99 ~~~~~~~~h~~~v~~~~~s~~------g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~ 172 (380)
T 3iz6_a 99 QKTHAIKLHCPWVMECAFAPN------GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETR 172 (380)
T ss_dssp EEEEEEECCCTTCCCCEECTT------SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSC
T ss_pred ccceEEecCCCCEEEEEECCC------CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCE
Confidence 345678899999999999997 57999999999999999865321000 0011224588999999999974 67
Q ss_pred EEEEeCCCcEEEEEccCCceeeeEee-----ccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecC
Q 018675 89 LATASFDATTCIWEDVGGDYECVATL-----EGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH 162 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~~~~~~~~-----~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h 162 (352)
|++|+.|++|++||..++.. +..+ .+|...|.+++|++ ++++|++|+.|++|++||++... ..+..+.+|
T Consensus 173 l~s~s~D~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h 248 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQR--ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--RAVRTYHGH 248 (380)
T ss_dssp EEEECTTSCEEEECTTTCCE--EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--CCCEEECCC
T ss_pred EEEECCCCcEEEEEcCCCcE--EEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--cceEEECCc
Confidence 99999999999999877643 3333 57899999999987 88999999999999999986432 235667899
Q ss_pred ccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeec---cCCCCcccEEEEEEcCCCCEEEEEeCCCcEE
Q 018675 163 AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE---SNNGHSSTIWALSFNAKGDKLVSCSDDLTIK 239 (352)
Q Consensus 163 ~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~---~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~ 239 (352)
...|.+++|+|++.+|++++.|+.|++||+... .....+.. ....+...|.+++|+|+|++|++|+.||.|+
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG-----HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSCEEEEETTTT-----EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC-----cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 999999999999999999999999999987653 22222221 1122345689999999999999999999999
Q ss_pred EEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEcc
Q 018675 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES 297 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~ 297 (352)
+||+...+.. .........|...|.+++|++++ ++++|+.|+++++|+..
T Consensus 324 vwd~~~~~~~--------~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 324 VWDTLLAEMV--------LNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp EEETTTCCEE--------EEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred EEECCCCceE--------EEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 9997533211 01111123477889999999976 89999999999999764
No 78
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.7e-32 Score=246.17 Aligned_cols=286 Identities=27% Similarity=0.457 Sum_probs=225.8
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
+.+.++.+|.+.|++++|++ .++++|+.|++|++|++.+++... .+ ..|...|.+++|+ ++.+++
T Consensus 150 ~~~~~~~~h~~~v~~~~~~~--------~~l~s~~~dg~i~vwd~~~~~~~~----~~-~~h~~~v~~~~~~--~~~l~s 214 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMRD--------NIIISGSTDRTLKVWNAETGECIH----TL-YGHTSTVRCMHLH--EKRVVS 214 (445)
T ss_dssp CEEEECCCCSSCEEEEEEET--------TEEEEEETTSCEEEEETTTTEEEE----EE-CCCSSCEEEEEEE--TTEEEE
T ss_pred cEEEEEcCCCCCEEEEEecC--------CEEEEEeCCCeEEEEECCcCcEEE----EE-CCCCCcEEEEEec--CCEEEE
Confidence 45667889999999999975 489999999999999998764322 22 3588899999995 578999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
|+.|+++++||..+++ +...+.+|...|.++.| +++.+++++.|++|++||+..+ .++..+.+|...+.++.|
T Consensus 215 ~s~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 215 GSRDATLRVWDIETGQ--CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp EETTSEEEEEESSSCC--EEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT---EEEEEECCCSSCEEEEEE
T ss_pred EeCCCEEEEEECCCCc--EEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC---cEeEEecCCCCceEEEEE
Confidence 9999999999987663 46677889999999999 6789999999999999998654 456677889999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
++..+++++.|+.|++|++... .....+ .+|...+.++.++ +.++++|+.||.|++||++..+
T Consensus 288 --~~~~l~~~~~d~~i~i~d~~~~-----~~~~~~----~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~---- 350 (445)
T 2ovr_B 288 --DGIHVVSGSLDTSIRVWDVETG-----NCIHTL----TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQ---- 350 (445)
T ss_dssp --CSSEEEEEETTSCEEEEETTTC-----CEEEEE----CCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC----
T ss_pred --CCCEEEEEeCCCeEEEEECCCC-----CEEEEE----cCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCc----
Confidence 7789999999999999987653 223333 3678888888774 6799999999999999975321
Q ss_pred CCCccceeeEEeec--ccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceee-ecccccCcceeEEEecC
Q 018675 252 DGYASWRHLCTISG--YHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLL-KKEKAHDMDVNSVQWSP 328 (352)
Q Consensus 252 ~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~i~~~~~sp 328 (352)
....+.. .|...+.++.++ +.++++++.||.+++|+....... ..+. ....+|.+.|++++|+|
T Consensus 351 -------~~~~~~~~~~~~~~v~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 351 -------CLQTLQGPNKHQSAVTCLQFN-KNFVITSSDDGTVKLWDLKTGEFI-----RNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp -------EEEEECSTTSCSSCEEEEEEC-SSEEEEEETTSEEEEEETTTCCEE-----EEEEECTTGGGTCEEEEEEECS
T ss_pred -------EEEEEccCCCCCCCEEEEEEC-CCEEEEEeCCCeEEEEECCCCcee-----eeeeccccCCCCceEEEEEecC
Confidence 1222222 266778999986 478999999999999976543221 1111 12247889999999999
Q ss_pred CCcceEEEecCCCe----EEEEeecc
Q 018675 329 GERRLLASASDDGM----IKIWELAN 350 (352)
Q Consensus 329 ~~~~~l~s~~~Dg~----i~iw~~~~ 350 (352)
++. ++++|+.||+ |.|||+..
T Consensus 418 ~~~-~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 418 TKL-VCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp SEE-EEEEECSSSSSCCEEEEEECCC
T ss_pred CEE-EEEEcccCCCCccEEEEEECCC
Confidence 875 7899999998 99999864
No 79
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-34 Score=257.96 Aligned_cols=275 Identities=9% Similarity=0.072 Sum_probs=206.9
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
.-.+.|.+++|+|+ ++++||+|.|++|+ +..... .+ ..|...|.+++|+|+| .++.+
T Consensus 13 ~~~~~v~sv~~SpD------G~~iASas~D~TV~--d~~~~~-------~l-~gh~~~v~~V~FsPdg-------~~~~~ 69 (588)
T 2j04_A 13 EFEDWKNNLTWARD------GTLYLTTFPDISIG--QPKYAK-------DI-NCNSKNLFHVKEFPLE-------FENKL 69 (588)
T ss_dssp CCSSSSCCEEECTT------SCEEEECSSSEEEE--EECCCS-------CC-SSBGGGTEEEEEECCC-------CCCTT
T ss_pred HhhccEEEEEECCC------CCEEEEEcCCceee--cccccc-------ee-cCCCccEEEEEECCCC-------CcceE
Confidence 34578999999997 68999999999999 644332 22 4699999999999998 56666
Q ss_pred EEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc-----CeeEEEEcC
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ-----DVKMVQWHP 173 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~-----~v~~~~~~~ 173 (352)
.+|+.... ....+ +|...|.+++|+|+|.+|++++.||.|++||... ++..+. |.. .+.+++|+|
T Consensus 70 ~~~~~~~~---~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 70 DFELAQQN---GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp TTSCCCSS---CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECS
T ss_pred EEEeCCCc---eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcC
Confidence 66653221 12222 4578899999999999999999999999999532 445555 554 499999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCC--CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSD--NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~--~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
++++|++|+.||+|++|++...... .+..+.++.....+|..+|.+++|+|+| +++++.|+.|++|+++.....
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~-- 215 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ-- 215 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC--
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc--
Confidence 9999999999999999997653210 1123444443445789999999999999 888999999999997532210
Q ss_pred CCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe--cCC
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW--SPG 329 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~--sp~ 329 (352)
.....+...|...|.+++|+ +.++++++ +++|++|+.... .......+|...|+.++| +|+
T Consensus 216 ------~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~---------~~~~~~~gh~~~V~~va~~~s~d 278 (588)
T 2j04_A 216 ------PVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNY---------SISSLKTGSLENFHIIPLNHEKE 278 (588)
T ss_dssp ------CCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTT---------EEEEEECSCCSCCCEEEETTCSS
T ss_pred ------cceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCC---------eEEEEEcCCCceEEEEEeeeCCC
Confidence 01122333466789999998 67888887 699999976532 111222379999999999 999
Q ss_pred CcceEEEecCCCeEEEEeec
Q 018675 330 ERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 330 ~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+. .|+++++||+ |+|...
T Consensus 279 ~~-~La~a~edG~-klw~~d 296 (588)
T 2j04_A 279 ST-ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CE-EEEECSSCEE-EEEESS
T ss_pred CC-EEEEEcCCCC-EEEeec
Confidence 85 6889999999 999863
No 80
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-31 Score=243.82 Aligned_cols=282 Identities=28% Similarity=0.539 Sum_probs=219.1
Q ss_pred eeeeecCCccce-EEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 13 EIQTLEGHTDRV-WSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 13 ~~~~~~gH~~~V-~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
....+.||.+.| +|+.++ ++++++|+.||+|++|+..+++.... + ..|...|.+++|+ ++.+++
T Consensus 110 ~~~~l~~h~~~v~~~~~~~--------g~~l~sg~~dg~i~vwd~~~~~~~~~----~-~~h~~~v~~~~~~--~~~l~s 174 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCLQFC--------GNRIVSGSDDNTLKVWSAVTGKCLRT----L-VGHTGGVWSSQMR--DNIIIS 174 (445)
T ss_dssp CCEEEECSTTSCEEEEEEE--------TTEEEEEETTSCEEEEETTTCCEEEE----C-CCCSSCEEEEEEE--TTEEEE
T ss_pred eeEEecccCCCcEEEEEEc--------CCEEEEEECCCcEEEEECCCCcEEEE----E-cCCCCCEEEEEec--CCEEEE
Confidence 456788999975 566553 36899999999999999987653322 2 3588999999997 679999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
|+.|++|++||..++ .+...+.+|...|.++.|+ ++.+++|+.|++|++||+..+. ++..+.+|...+.++.+
T Consensus 175 ~~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~---~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 175 GSTDRTLKVWNAETG--ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ---CLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp EETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC---EEEEEECCSSCEEEEEE
T ss_pred EeCCCeEEEEECCcC--cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc---EEEEEcCCcccEEEEEE
Confidence 999999999998776 4567788999999999995 5789999999999999997654 45667789999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG 251 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (352)
++..+++++.|+.|++|+.... .....+ .+|...|.++.| ++.++++++.||.|++||++..+
T Consensus 248 --~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~----~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~---- 310 (445)
T 2ovr_B 248 --DGRRVVSGAYDFMVKVWDPETE-----TCLHTL----QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN---- 310 (445)
T ss_dssp --CSSCEEEEETTSCEEEEEGGGT-----EEEEEE----CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC----
T ss_pred --CCCEEEEEcCCCEEEEEECCCC-----cEeEEe----cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC----
Confidence 6778999999999999987543 233333 368889999999 78899999999999999985422
Q ss_pred CCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 252 DGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
....+. .|...+.++.++ +.++++++.|+.+++|+...... . ..+.....|...|++++|++
T Consensus 311 -------~~~~~~-~~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~-----~-~~~~~~~~~~~~v~~~~~~~--- 372 (445)
T 2ovr_B 311 -------CIHTLT-GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQC-----L-QTLQGPNKHQSAVTCLQFNK--- 372 (445)
T ss_dssp -------EEEEEC-CCCSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCE-----E-EEECSTTSCSSCEEEEEECS---
T ss_pred -------EEEEEc-CCcccEEEEEEe-CCEEEEEeCCCeEEEEECCCCcE-----E-EEEccCCCCCCCEEEEEECC---
Confidence 112222 355567777764 45899999999999997643211 1 11112234889999999974
Q ss_pred ceEEEecCCCeEEEEeeccC
Q 018675 332 RLLASASDDGMIKIWELANT 351 (352)
Q Consensus 332 ~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.+|++++.||.|++|++..+
T Consensus 373 ~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 373 NFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp SEEEEEETTSEEEEEETTTC
T ss_pred CEEEEEeCCCeEEEEECCCC
Confidence 36889999999999998753
No 81
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-34 Score=254.81 Aligned_cols=263 Identities=17% Similarity=0.275 Sum_probs=197.3
Q ss_pred eecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe
Q 018675 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 152 (352)
+..+|++++|+|++++|++|+.|+.|++|+..++...+...+.+|...|.+++|+|++++|++++.|++|++||+..+..
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 56789999999999999999999999999988765456777889999999999999999999999999999999876542
Q ss_pred eEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
......+.+|...|.+++|+|++..|++++.|+.|++|++..... +.....+. ..|...|.+++|+|++.+|+++
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~---~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND--WWVSKHLK---RPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-------CCCCEEEC---SSCCSCEEEEEECTTSSEEEEE
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc--ceeeeEee---cccCCCeEEEEEcCCCCEEEEE
Confidence 334556778999999999999999999999999999998765321 11122222 2388999999999999999999
Q ss_pred eCCCcEEEEcCCccccccCCCCc-------cceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccC
Q 018675 233 SDDLTIKIWGADITRMQSGDGYA-------SWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDG 304 (352)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~ 304 (352)
+.|+.|++||++........... .......+ .|...+.+++|++++ ++++++.|+.+++|+......
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~--- 239 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ--- 239 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS---
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC---
Confidence 99999999998533221111001 11112222 577889999999976 799999999999997654321
Q ss_pred cccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 305 PSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 305 ~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
....+....+|...|++++|+|+++ +|++++.|+.+ +|+..
T Consensus 240 --~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 240 --PPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp --CEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCC
T ss_pred --cceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeC
Confidence 1112345678999999999999986 67888877766 66543
No 82
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.6e-33 Score=239.06 Aligned_cols=221 Identities=27% Similarity=0.528 Sum_probs=175.5
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CCEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GKLLA 90 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~ 90 (352)
.+.+|.+|.+.|++++|+|.. .+.+|+|||.|++|++|++.++.. .... ....|...|.+++|+|+ |++|+
T Consensus 45 ~~~~l~gH~~~V~~v~~s~~~----~g~~l~s~s~D~~v~iWd~~~~~~--~~~~-~~~~h~~~v~~v~~~p~~~g~~l~ 117 (297)
T 2pm7_B 45 LIDTLTGHEGPVWRVDWAHPK----FGTILASCSYDGKVMIWKEENGRW--SQIA-VHAVHSASVNSVQWAPHEYGPMLL 117 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGG----GCSEEEEEETTTEEEEEEBSSSCB--CCCE-EECCCSSCEEEEEECCGGGCSEEE
T ss_pred EEEEEccccCCeEEEEecCCC----cCCEEEEEcCCCEEEEEEcCCCce--EEEE-EeecCCCceeEEEeCcCCCCcEEE
Confidence 456789999999999998631 146899999999999999876531 1111 12358889999999997 89999
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC-------------CcEEEEeeCCCcEEEEecCCCC-eeEEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS-------------GTLLATCGRDKSVWIWEVMPGN-EFECV 156 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-------------~~~l~s~~~d~~v~vwd~~~~~-~~~~~ 156 (352)
+|+.|+++++||...+.......+.+|...|.+++|+|+ +.+|++|+.|++|++||+..+. .....
T Consensus 118 s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~ 197 (297)
T 2pm7_B 118 VASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (297)
T ss_dssp EEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred EEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEE
Confidence 999999999999876532223566789999999999996 4689999999999999987544 23355
Q ss_pred EEeecCccCeeEEEEcCCC---CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe
Q 018675 157 SVLQGHAQDVKMVQWHPTM---DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~~~~---~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
..+.+|...|.+++|+|++ .+|++++.|+.|++|++..... .+.. ..+ ...+|...|++++|+|++++|++++
T Consensus 198 ~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~-~~~~-~~~--~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 198 STLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG-PWKK-TLL--KEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS-CCEE-EES--SSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC-ccce-eee--ecccCCCcEEEEEECCCCCEEEEEc
Confidence 6788999999999999984 7899999999999998765321 1111 111 1235788999999999999999999
Q ss_pred CCCcEEEEcCC
Q 018675 234 DDLTIKIWGAD 244 (352)
Q Consensus 234 ~dg~i~iwd~~ 244 (352)
.||+|++|+.+
T Consensus 274 ~D~~v~lw~~~ 284 (297)
T 2pm7_B 274 GDNKVTLWKEN 284 (297)
T ss_dssp TTSCEEEEEEC
T ss_pred CCCcEEEEEEC
Confidence 99999999864
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-34 Score=262.83 Aligned_cols=212 Identities=11% Similarity=0.075 Sum_probs=150.9
Q ss_pred CccceEEEEEccCC-CC---------------------CCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecce
Q 018675 20 HTDRVWSLAWKPTA-GV---------------------DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTV 77 (352)
Q Consensus 20 H~~~V~~i~~~p~~-~~---------------------~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v 77 (352)
+.+.|++|+|+|+. +. .+.++.|+|++.|++|+||++.++.........+ ..|.+.|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l-~~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTI-VHSFGEV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEE-EECCCSE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEE-EecCCcE
Confidence 57899999999974 10 0112245557789999999987654322111111 2356889
Q ss_pred EEEEECCC------CCEEEEEeCCCcEEEEEccCCce---------eeeEeeccccCCeeEEEECCCCcEEEEeeCCCcE
Q 018675 78 RSCAWSPS------GKLLATASFDATTCIWEDVGGDY---------ECVATLEGHENEVKSVSWNASGTLLATCGRDKSV 142 (352)
Q Consensus 78 ~~~~~s~~------~~~l~s~~~d~~i~i~~~~~~~~---------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v 142 (352)
.+++|+|+ +.+||+++.|++|++|+...+.. .+...+.+|...|++++|+++ ..|++|+.|++|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV 289 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFV 289 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEE
Confidence 99999996 57999999999999999865421 123467789999999999986 489999999999
Q ss_pred EEEecCCCCeeEEEEEeecCccCeeEE--EEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCc--ccE
Q 018675 143 WIWEVMPGNEFECVSVLQGHAQDVKMV--QWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS--STI 217 (352)
Q Consensus 143 ~vwd~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~--~~i 217 (352)
++||+..+.. +...+.+|...|+++ .|+|++ .+|++++.|++|++||+... .+...+. +|. ..|
T Consensus 290 ~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~-----~~~~~~~----~~~~~~~v 358 (524)
T 2j04_B 290 AEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI-----ATTKTTV----SRFRGSNL 358 (524)
T ss_dssp EEEETTBCSS--CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH-----HHHCEEE----EECSCCSC
T ss_pred EEEECCCCCC--ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC-----Ccccccc----cccccCcc
Confidence 9999975421 234567899999999 567877 89999999999999987542 1111221 232 247
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 218 WALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 218 ~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.+++|+|++..+++++.|++|++||++
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~ 385 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSR 385 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETT
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECc
Confidence 889999999999999999999999875
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.9e-31 Score=261.37 Aligned_cols=301 Identities=21% Similarity=0.302 Sum_probs=224.3
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+.++.+|...|++++|+|+ +++|++++.|++|++|++.++..... + ..|...|++++|+|+++.|++
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~i~vw~~~~~~~~~~----~-~~~~~~v~~~~~s~~~~~l~~ 114 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIAR------KNWIIVGSDDFRIRVFNYNTGEKVVD----F-EAHPDYIRSIAVHPTKPYVLS 114 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGG------GTEEEEEETTSEEEEEETTTCCEEEE----E-ECCSSCEEEEEECSSSSEEEE
T ss_pred ceEEEEecCCCcEEEEEEeCC------CCEEEEEeCCCeEEEEECCCCcEEEE----E-ecCCCCEEEEEEeCCCCEEEE
Confidence 455678899999999999997 57999999999999999987754322 1 348899999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
++.|+.+++|+..++. .....+.+|...|.+++|+| ++..|++++.|++|++||+..+.... .....+...+.+++
T Consensus 115 ~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~~~v~~~~ 191 (814)
T 3mkq_A 115 GSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF--TLTTGQERGVNYVD 191 (814)
T ss_dssp EETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE--EEECCCTTCCCEEE
T ss_pred EcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee--EEecCCCCCEEEEE
Confidence 9999999999987653 34567788999999999999 88899999999999999986554322 22233447899999
Q ss_pred EcC--CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccc
Q 018675 171 WHP--TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRM 248 (352)
Q Consensus 171 ~~~--~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (352)
|+| ++.++++++.|+.|++|+.... .....+ .+|...|.+++|+|++.++++++.||.|++||+...+
T Consensus 192 ~~~~~~~~~l~~~~~dg~i~~~d~~~~-----~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~- 261 (814)
T 3mkq_A 192 YYPLPDKPYMITASDDLTIKIWDYQTK-----SCVATL----EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK- 261 (814)
T ss_dssp ECCSTTCCEEEEECTTSEEEEEETTTT-----EEEEEE----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS-
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCC-----cEEEEE----cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-
Confidence 999 8999999999999999987543 233333 2688899999999999999999999999999875321
Q ss_pred ccCCCCccceeeEEeecccCcceEEEEecCCce--EEecCCCCeEEEEEccCCccc------------------------
Q 018675 249 QSGDGYASWRHLCTISGYHDRTIFSVHWSREGI--IASGAADDSVQFFVESKDDLI------------------------ 302 (352)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~s~~~d~~v~~~~~~~~~~~------------------------ 302 (352)
....+ ..+...+.+++|++++. +++.+.++.+.+|........
T Consensus 262 ----------~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 330 (814)
T 3mkq_A 262 ----------VEKTL-NVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFT 330 (814)
T ss_dssp ----------EEEEE-CCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEE
T ss_pred ----------EEEEe-ecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeee
Confidence 12222 23556788999998863 344445566666654321100
Q ss_pred ----------cCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 303 ----------DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 303 ----------~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
..............|...+.+++|+|+++ ++++++ |+.+.+|++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 331 AVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGR-FVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp EECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSS-EEEEEE-TTEEEEEETT
T ss_pred eecccccccccCccceeeeecCCCCccCCceeEECCCCC-EEEEec-CCEEEEEECc
Confidence 00000000111234566788999999886 566666 8889998864
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-31 Score=239.30 Aligned_cols=261 Identities=18% Similarity=0.318 Sum_probs=205.3
Q ss_pred ceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 72 MHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
.|..+|++++|+|++++|++++.|+.|++|+..+++......+.+|...|.+++|+|++++|++++.|+.|++||+..+.
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 47889999999999999999999999999998877655677888999999999999999999999999999999986543
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
......+..|...+.+++|+|++.++++++.|+.|++|++..... +..... ...+|...|.+++|+|++.+|++
T Consensus 86 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~--~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 86 -WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND--WWVCKH---IKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp -EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT--EEEEEE---ECTTCCSCEEEEEECTTSSEEEE
T ss_pred -eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCc--ceeeee---eecccCCCeeEEEEcCCCCEEEE
Confidence 223344567888999999999999999999999999998765321 111222 22468889999999999999999
Q ss_pred EeCCCcEEEEcCCccccccCCC-------CccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCcccc
Q 018675 232 CSDDLTIKIWGADITRMQSGDG-------YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLID 303 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~ 303 (352)
++.||.|++||++......... .........+. .|...+.++.|++++ ++++++.|+.+++|+....
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---- 234 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK---- 234 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT----
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC----
Confidence 9999999999975322111100 00111222222 467789999999876 8999999999999976432
Q ss_pred CcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 304 ~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..+.....|...|++++|+|+++ +|+++ .|+.|++|++..
T Consensus 235 -----~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 235 -----MAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp -----TEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred -----ceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 22344567888999999999986 66655 899999999875
No 86
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-32 Score=240.56 Aligned_cols=220 Identities=25% Similarity=0.535 Sum_probs=175.0
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CCEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GKLLA 90 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~ 90 (352)
.+.+|.||.+.|++++|+|.. .+.+|+|||.|++|++|++.++.. ..... ...|...|++++|+|+ +.+|+
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~----~~~~l~s~s~D~~v~iWd~~~~~~--~~~~~-~~~h~~~V~~v~~~p~~~g~~la 121 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPM----YGNILASCSYDRKVIIWREENGTW--EKSHE-HAGHDSSVNSVCWAPHDYGLILA 121 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGG----GSSCEEEEETTSCEEEECCSSSCC--CEEEE-ECCCSSCCCEEEECCTTTCSCEE
T ss_pred EEEEEcCCCccEEEEEeCCCC----CCCEEEEEECCCEEEEEECCCCcc--eEEEE-ccCCCCceEEEEECCCCCCcEEE
Confidence 356789999999999997631 146899999999999999876421 11111 2358899999999998 78999
Q ss_pred EEeCCCcEEEEEccCCc-eeeeEeeccccCCeeEEEECCC-----------------CcEEEEeeCCCcEEEEecCCCCe
Q 018675 91 TASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNAS-----------------GTLLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~-----------------~~~l~s~~~d~~v~vwd~~~~~~ 152 (352)
+|+.|++|++|+...+. ......+.+|...|.+++|+|+ +.+|++|+.|++|++||+.....
T Consensus 122 sgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~ 201 (316)
T 3bg1_A 122 CGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ 201 (316)
T ss_dssp EECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC
T ss_pred EEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc
Confidence 99999999999986542 2334556789999999999997 46899999999999999865544
Q ss_pred eEEEEEeecCccCeeEEEEcCCC----CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTM----DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
..+...+.+|...|.+++|+|++ .+|++++.|+.|++|++.......+. ...+ .+|...|++++|+|++++
T Consensus 202 ~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~-~~~~----~~~~~~v~~v~~sp~g~~ 276 (316)
T 3bg1_A 202 WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS-PKLL----HKFNDVVWHVSWSITANI 276 (316)
T ss_dssp EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB-CCEE----EECSSCEEEEEECTTTCC
T ss_pred cceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchh-hhhh----hcCCCcEEEEEEcCCCCE
Confidence 45667788999999999999986 78999999999999987652211111 1111 247789999999999999
Q ss_pred EEEEeCCCcEEEEcCC
Q 018675 229 LVSCSDDLTIKIWGAD 244 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~ 244 (352)
|++++.||+|++|+..
T Consensus 277 las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 277 LAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEESSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEEEC
Confidence 9999999999999864
No 87
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.1e-31 Score=236.27 Aligned_cols=262 Identities=15% Similarity=0.121 Sum_probs=187.9
Q ss_pred eecCCccceEEEEEccCCCC---CCCccEEEEeeCCCeEEEEecCCCceeeeeeeee----ecceecceEEEEECCCCCE
Q 018675 16 TLEGHTDRVWSLAWKPTAGV---DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVL----EEMHTRTVRSCAWSPSGKL 88 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~---~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~----~~~h~~~v~~~~~s~~~~~ 88 (352)
+|.+|.+.|.++++.++.-. ......+++++.|+++|+|+.............. ...+...+++++|||||++
T Consensus 68 ~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~ 147 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTV 147 (365)
T ss_dssp ECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSC
T ss_pred EccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCE
Confidence 57789999999988653100 0001223344568899999876654332221111 1123456899999999999
Q ss_pred EEEEe--CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe
Q 018675 89 LATAS--FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV 166 (352)
Q Consensus 89 l~s~~--~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v 166 (352)
+++++ .|++|+|||..++. ++..+. |.+.|.+++|+|+|++|++++.|+ +.+|+...+... .......|...+
T Consensus 148 la~as~~~d~~i~iwd~~~~~--~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~-~~~~~~~~~~~v 222 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDLT--EKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCI-ARKTDFDKNWSL 222 (365)
T ss_dssp EEEEESCSSCEEEEEETTTTE--EEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEE-EEECCCCTTEEE
T ss_pred EEEEECCCCCEEEEeECCCCc--EEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcce-eeeecCCCCCCE
Confidence 87554 78999999987764 445554 778999999999999999998665 556665544432 223456788889
Q ss_pred eEEEEcCCCCEEEEEeCCC----cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 167 KMVQWHPTMDVLFSCSYDN----TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
.+++|+|++..+++++.|+ .++.|+...... ... ......+|...|++++|+|+|++||+|+.|++|+|||
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~---~~~--~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd 297 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT---SVL--RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVK 297 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE---EEE--EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEeeccccccee---cce--eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEE
Confidence 9999999999999999887 577786543211 111 1112236888999999999999999999999999999
Q ss_pred CCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 243 ADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
++.. +.+..+...|...|.+++|+|++ +|++++.|++|++|+...
T Consensus 298 ~~~~-----------~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 298 LKDL-----------SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTTT-----------EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCC-----------cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 7532 23334445688899999999987 799999999999998754
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.1e-30 Score=226.77 Aligned_cols=272 Identities=23% Similarity=0.311 Sum_probs=195.3
Q ss_pred EEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCCCcEEEEEccCCc---eeeeEeecccc
Q 018675 43 ASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGD---YECVATLEGHE 118 (352)
Q Consensus 43 ~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~~~~~---~~~~~~~~~h~ 118 (352)
.+|...|+-.+|-.....+.......+ +.|++.|++++|+|+ +++|+||+.|++|++||....+ ..+...+.+|.
T Consensus 8 ~~g~d~g~~~~~~~~~~~~~~~l~~tL-~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~ 86 (340)
T 4aow_A 8 SSGVDLGTENLYFQSMMTEQMTLRGTL-KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 86 (340)
T ss_dssp ------------------CEEEEEEEE-CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS
T ss_pred ccccCCCCccEEEEEccCCceEEEEEE-CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC
Confidence 344445665554322211112233333 469999999999997 6899999999999999976532 23456788999
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 198 (352)
..|.+++|+|++++|++++.|+.|++|+..... .......+...+....++|++..+++++.|+.+++|+.....
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~-- 161 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT---TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC-- 161 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE--
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccc---eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc--
Confidence 999999999999999999999999999986543 334455667788889999999999999999999999764321
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCC--CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEe
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKG--DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHW 276 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 276 (352)
.......+|...+..++|++++ .++++++.|+.|++||++..+ ....+ ..|...+.++++
T Consensus 162 ------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-----------~~~~~-~~h~~~v~~~~~ 223 (340)
T 4aow_A 162 ------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-----------LKTNH-IGHTGYLNTVTV 223 (340)
T ss_dssp ------EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-----------EEEEE-CCCSSCEEEEEE
T ss_pred ------eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-----------eeeEe-cCCCCcEEEEEE
Confidence 1112334788999999998864 578899999999999975322 22222 246778999999
Q ss_pred cCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 277 SREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 277 ~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+|++ ++++++.|+.+++|+..... .+... .+...|++++|+|++. +++++.|+.|+|||+..
T Consensus 224 s~~~~~l~s~s~Dg~i~iwd~~~~~---------~~~~~-~~~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 224 SPDGSLCASGGKDGQAMLWDLNEGK---------HLYTL-DGGDIINALCFSPNRY--WLCAATGPSIKIWDLEG 286 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTTE---------EEEEE-ECSSCEEEEEECSSSS--EEEEEETTEEEEEETTT
T ss_pred CCCCCEEEEEeCCCeEEEEEeccCc---------eeeee-cCCceEEeeecCCCCc--eeeccCCCEEEEEECCC
Confidence 9976 89999999999999765321 12222 2446799999999764 45778899999999864
No 89
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.7e-31 Score=253.35 Aligned_cols=247 Identities=26% Similarity=0.402 Sum_probs=196.7
Q ss_pred cceecceEEEEECCCC-CEEEEEeCCCcEEEEEccCCc---eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEe
Q 018675 71 EMHTRTVRSCAWSPSG-KLLATASFDATTCIWEDVGGD---YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~i~~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd 146 (352)
..|.+.|++++|+|++ ++|++|+.|++|++|+..... ......+.+|...|++++|+|++++|++|+.|++|++||
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 4699999999999875 799999999999999975432 123456789999999999999999999999999999999
Q ss_pred cCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC
Q 018675 147 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~ 226 (352)
+..+ .+...+.+|...|.+++|+|++..|++++.|+.|++|+.... +...+.....+|...|.+++|+|++
T Consensus 459 ~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 459 LAAG---VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE------CKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp TTTT---EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC------EEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CCCC---cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC------cceeeccCCCCCCCcEEEEEEeCCC
Confidence 8755 345677899999999999999999999999999999975432 2223333445799999999999986
Q ss_pred --CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCcccc
Q 018675 227 --DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLID 303 (352)
Q Consensus 227 --~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~ 303 (352)
.++++++.|++|++||++..+ ....+ ..|...+.++++++++ ++++++.|+.|++|+.....
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~-----------~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~--- 594 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCK-----------LRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK--- 594 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCC-----------EEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE---
T ss_pred CcceEEEEeCCCeEEEEECCCCc-----------EEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---
Confidence 689999999999999975321 11222 3477889999999976 89999999999999764321
Q ss_pred CcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 304 ~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+... .+...|++++|+|++. +|+ ++.|+.|+|||+..
T Consensus 595 ------~~~~~-~~~~~v~~~~~sp~~~-~l~-~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 595 ------KLYSL-EANSVIHALCFSPNRY-WLC-AATEHGIKIWDLES 632 (694)
T ss_dssp ------EEECC-BCSSCEEEEEECSSSS-EEE-EEETTEEEEEETTT
T ss_pred ------eEEEe-cCCCcEEEEEEcCCCc-EEE-EEcCCCEEEEECCC
Confidence 12222 2446799999999875 554 45577899999864
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.8e-32 Score=245.18 Aligned_cols=259 Identities=13% Similarity=0.118 Sum_probs=184.3
Q ss_pred ceecceEEEEECC-CCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCC
Q 018675 72 MHTRTVRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 72 ~h~~~v~~~~~s~-~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~ 149 (352)
.|...|++++|+| ++++||+|+.||+|+|||..+++......+.+|.+.|++++|+| ++++|++|+.|++|++||+..
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 3677899999999 56799999999999999987766555666779999999999998 688999999999999999864
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-E
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-K 228 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~ 228 (352)
. ..........+...+.+++|+|++.+|++|+.|+.|++|++.... +. ...+|...|.+++|+|++. +
T Consensus 197 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~------~~----~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 197 N-ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE------LW----NLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp C-EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB------CC----CSBCCSSCEEEEEECTTCSSE
T ss_pred C-ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce------eE----EEecccceEEeeeecCCCceE
Confidence 3 222222222334457889999999999999999999999875321 11 2347999999999999876 6
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSY 307 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~ 307 (352)
|++|+.|+.|++||++..+.... ......|...|.+++|++++ ++++++.|+.+++|+............
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~---------~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKAS---------FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSC---------CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred EEEecCcceeeEEecccccccce---------EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEec
Confidence 88999999999999864322110 00112367789999999876 899999999999998764332111000
Q ss_pred ce--------eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 308 KM--------LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 308 ~~--------~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+. .+.........+..+++++++..+++++..++.|++|+...
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~ 387 (435)
T 4e54_B 337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS 387 (435)
T ss_dssp CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence 00 00000011223444555555544444445567899999865
No 91
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-31 Score=227.47 Aligned_cols=241 Identities=22% Similarity=0.348 Sum_probs=197.8
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
..|...|++++| |++++|++|+.|+.+++|+..++ .....+..|...|.+++|+|++.+|++++.|+.+++|++...
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ--WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS--EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC--EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec
Confidence 458999999999 99999999999999999998665 345567789999999999999999999999999999998765
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC-CCCEE
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA-KGDKL 229 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~-~~~~l 229 (352)
.....+..+.+|...+.++.| ++..+++++.|+.|++|+.. .....+ ..|...+.++.|+| ++.++
T Consensus 92 ~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~-------~~~~~~----~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG-------SLVYNL----QAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT-------EEEEEE----ECCSSCEEEEEEEETTTTEE
T ss_pred CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC-------cEEEec----ccCCCceeEEEEccCCCCEE
Confidence 544556667889999999999 46789999999999999711 122222 25888999999988 89999
Q ss_pred EEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccce
Q 018675 230 VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
++++.||.|++||.. .....+...+...+.++.+++++.+++++.|+.+++|+.... .
T Consensus 159 ~~~~~d~~i~i~d~~-------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~---------~ 216 (313)
T 3odt_A 159 LTASADKTIKLWQND-------------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG---------D 216 (313)
T ss_dssp EEEETTSCEEEEETT-------------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC---------C
T ss_pred EEEECCCCEEEEecC-------------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch---------h
Confidence 999999999999843 122233334677899999999988999999999999976532 2
Q ss_pred eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.+....+|...|++++|+|++ . |++++.||.|++||+...
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 217 VLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp EEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTTC
T ss_pred hhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCCC
Confidence 334456899999999999988 3 679999999999998653
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-30 Score=237.04 Aligned_cols=303 Identities=12% Similarity=0.047 Sum_probs=211.0
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc---eeeeeeeeee----------------------------
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS---RFWNCKAVLE---------------------------- 70 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~---~~~~~~~~~~---------------------------- 70 (352)
.++.+++|+|+ +.+|+++ .++.|++|+..+++ .+........
T Consensus 5 ~p~~~v~~s~d------g~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (450)
T 2vdu_B 5 HPLQNLLTSRD------GSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLK 77 (450)
T ss_dssp CCCCEEEECSS------SSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------
T ss_pred ccEEEEEecCC------CCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccc
Confidence 47889999997 4555554 68899999988776 2211110000
Q ss_pred ---------------------cceecceEEEEECCCCCEE-EEEeCCCcEEEEEcc--CCceeeeEeec--cccCCeeEE
Q 018675 71 ---------------------EMHTRTVRSCAWSPSGKLL-ATASFDATTCIWEDV--GGDYECVATLE--GHENEVKSV 124 (352)
Q Consensus 71 ---------------------~~h~~~v~~~~~s~~~~~l-~s~~~d~~i~i~~~~--~~~~~~~~~~~--~h~~~v~~v 124 (352)
..|...|++++|+|++++| ++|+.|+.|++|+.. ++. +...+. .|...|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~ 155 (450)
T 2vdu_B 78 SNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAI 155 (450)
T ss_dssp ----------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEE
T ss_pred cCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--eeeeeecccCCCCceEE
Confidence 0233479999999999996 899999999999987 553 333443 567899999
Q ss_pred EECCCCcEEEEeeCCCcEEEEecCCCCeeE-EEEEeecCccCeeEEEEcCC---CCEEEEEeCCCcEEEEecCCCCCCCc
Q 018675 125 SWNASGTLLATCGRDKSVWIWEVMPGNEFE-CVSVLQGHAQDVKMVQWHPT---MDVLFSCSYDNTIKVWWAEDTDSDNW 200 (352)
Q Consensus 125 ~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~ 200 (352)
+|+|++.+|++++.|+.+++|++....... +...+.+|...|.+++|+|+ +.+|++++.|+.|++|++....
T Consensus 156 ~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~---- 231 (450)
T 2vdu_B 156 SIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF---- 231 (450)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT----
T ss_pred EEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc----
Confidence 999999999999999999999987654332 33356789999999999999 8899999999999999876432
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCcc-cee------------eEEeeccc
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYAS-WRH------------LCTISGYH 267 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~------------~~~~~~~~ 267 (352)
.... ...+|...|.+++|+ ++.+|++++.|+.|++||++..+......... ... ........
T Consensus 232 -~~~~---~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 232 -IVDK---WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp -CEEE---ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred -eeee---eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 1222 134788999999999 99999999999999999986432110000000 000 00000012
Q ss_pred CcceEEEEecCCc-eEEecC-CCCeEEEEEc--cCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecC----
Q 018675 268 DRTIFSVHWSREG-IIASGA-ADDSVQFFVE--SKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD---- 339 (352)
Q Consensus 268 ~~~i~~~~~~~~~-~~~s~~-~d~~v~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~---- 339 (352)
...+..+.+.+++ ++++++ .++.+++|+. ..... ...+....+| ..|.+++|+|+ ..+++.++.
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~------l~~~~~~~~~-~~v~~~~~~~~-~~~v~~~~~~~~~ 378 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGD------LALKQIITFP-YNVISLSAHND-EFQVTLDNKESSG 378 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTC------EEEEEEEECS-SCEEEEEEETT-EEEEEECCTTCCS
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCc------eeeccEeccC-CceEEEEecCC-cEEEEEecccCCC
Confidence 3467888998876 666666 8999999977 22110 1223344556 78999999995 334443343
Q ss_pred --CCeEEEEeecc
Q 018675 340 --DGMIKIWELAN 350 (352)
Q Consensus 340 --Dg~i~iw~~~~ 350 (352)
+..|+||.+..
T Consensus 379 ~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 379 VQKNFAKFIEYNL 391 (450)
T ss_dssp SCCCSEEEEEEET
T ss_pred CCCcceEEEEEEc
Confidence 55689998753
No 93
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-30 Score=232.83 Aligned_cols=270 Identities=21% Similarity=0.300 Sum_probs=196.8
Q ss_pred eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcEEEEEc----cCCce----eeeEeecc----
Q 018675 50 TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTCIWED----VGGDY----ECVATLEG---- 116 (352)
Q Consensus 50 ~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~i~~~----~~~~~----~~~~~~~~---- 116 (352)
.+.+|++...... .....|...|++++|+|+++ +|++|+.|+.+++|+. .++.. .....+..
T Consensus 26 ~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (425)
T 1r5m_A 26 IDSSDDLDGFVKI-----LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFAL 100 (425)
T ss_dssp --------CCCEE-----CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCC
T ss_pred ccccccchhhhhh-----eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccc
Confidence 3456776543321 11234668999999999999 9999999999999998 66541 01222222
Q ss_pred ------ccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 117 ------HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 190 (352)
Q Consensus 117 ------h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw 190 (352)
|.+.|++++|+|++++|++++.|+.|++||. .+ ..+..+.+|...|.+++|+|++.+|++++.|+.|++|
T Consensus 101 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 176 (425)
T 1r5m_A 101 SASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TG---ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILW 176 (425)
T ss_dssp C------CBCEEEEEECTTSSEEEEEETTSCEEEEET-TS---CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred cccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CC---CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEE
Confidence 6779999999999999999999999999993 33 3456678899999999999999999999999999999
Q ss_pred ecCCCCCCC-----------------------ceeE-----------------e-------eeeccCCCCcccEEEEEEc
Q 018675 191 WAEDTDSDN-----------------------WHCV-----------------Q-------TISESNNGHSSTIWALSFN 223 (352)
Q Consensus 191 ~~~~~~~~~-----------------------~~~~-----------------~-------~~~~~~~~h~~~i~~l~~~ 223 (352)
++....... ...+ . .......+|...|.+++|+
T Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 177 NVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp ETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE
T ss_pred ECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC
Confidence 875421100 0000 0 0000123678899999999
Q ss_pred CCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCcccc
Q 018675 224 AKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLID 303 (352)
Q Consensus 224 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~ 303 (352)
|++++|++++.||.|++||++..+. ...+ ..+...+.++.|++++++++++.|+.+++|+....
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~-~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~---- 320 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNGNS-----------QNCF-YGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQN---- 320 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSBSC-----------SEEE-CCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTT----
T ss_pred CCCCEEEEEcCCCEEEEEECCCCcc-----------ceEe-cCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCC----
Confidence 9999999999999999999763221 1122 23567899999999889999999999999976432
Q ss_pred CcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 304 GPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 304 ~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
..+.....|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 321 -----~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 321 -----TLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp -----EEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHH
T ss_pred -----cEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCC
Confidence 23344567889999999999986 688999999999999864
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.3e-30 Score=233.46 Aligned_cols=255 Identities=13% Similarity=0.169 Sum_probs=192.6
Q ss_pred cceecceEEEEECCCC-CEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecC
Q 018675 71 EMHTRTVRSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVM 148 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~ 148 (352)
..|...|++++|+|++ ++|++|+.|+.|++|+..++.........+|...|.+++|+| ++++|++++.|++|++||+.
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 3588999999999999 999999999999999988766554444457999999999999 77899999999999999987
Q ss_pred CCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-
Q 018675 149 PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD- 227 (352)
Q Consensus 149 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~- 227 (352)
. ...........|...+.+++|+|++.++++++.|+.|++|++.. .....+ .+|...|.+++|+|++.
T Consensus 150 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~----~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 150 G-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG------HEIFKE----KLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp S-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS------CEEEEE----ECSSSCEEEEEECSSCTT
T ss_pred C-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC------CEEEEe----ccCCCcEEEEEECCCCCC
Confidence 4 33333333334457899999999999999999999999998732 123333 26889999999999999
Q ss_pred EEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC-Cc-eEEecCCCCeEEEEEccCCccccCc
Q 018675 228 KLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EG-IIASGAADDSVQFFVESKDDLIDGP 305 (352)
Q Consensus 228 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~s~~~d~~v~~~~~~~~~~~~~~ 305 (352)
+|++++.|+.|++||++..+.. ......+ .|...+.++.|++ ++ ++++++.|+.+++|+..........
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~-------~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDK-------NSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCST-------TCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EEEEEeCCCEEEEEeCCCCCcc-------cceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 9999999999999998642110 0112222 3678899999998 65 8899999999999987543322110
Q ss_pred ccceeeeccccc----------CcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 306 SYKMLLKKEKAH----------DMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 306 ~~~~~~~~~~~h----------~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.... .....| ...+..++|+|+++ + +++.||.|+|||+..
T Consensus 290 ~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~-~--s~s~d~~i~iwd~~~ 339 (383)
T 3ei3_B 290 IIHP--HRQFQHLTPIKATWHPMYDLIVAGRYPDDQ-L--LLNDKRTIDIYDANS 339 (383)
T ss_dssp EECC--BCCCTTSCCCCCEECSSSSEEEEECBCCTT-T--CTTCCCCEEEEETTT
T ss_pred cccc--ccccccccceEEeccCCCCceEEEecCCcc-c--ccCCCCeEEEEecCC
Confidence 0000 001112 24556688888875 3 899999999999864
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.8e-31 Score=239.89 Aligned_cols=257 Identities=16% Similarity=0.311 Sum_probs=189.3
Q ss_pred eecceEEEEECCCCCEEEEEeCCCcEEEEEccCCc---------eeeeEeecccc------------CCeeEEEECCCC-
Q 018675 73 HTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD---------YECVATLEGHE------------NEVKSVSWNASG- 130 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~---------~~~~~~~~~h~------------~~v~~v~~~~~~- 130 (352)
+.+.|++++|+|+|++||+|+.|+.|++|+..++. ..+...+.+|. +.|++++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 56899999999999999999999999999976543 22466778998 889999999998
Q ss_pred -cEEEEeeCCCcEEEEecCCCCee------------------------------------EEEEE-eecCccCeeEEEEc
Q 018675 131 -TLLATCGRDKSVWIWEVMPGNEF------------------------------------ECVSV-LQGHAQDVKMVQWH 172 (352)
Q Consensus 131 -~~l~s~~~d~~v~vwd~~~~~~~------------------------------------~~~~~-~~~h~~~v~~~~~~ 172 (352)
.+|++++.|++|++||+...... .+... ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999998542110 01112 35799999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeee---eccCCCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEcCCcccc
Q 018675 173 PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI---SESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGADITRM 248 (352)
Q Consensus 173 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~---~~~~~~h~~~i~~l~~~~~~-~~l~s~~~dg~i~iwd~~~~~~ 248 (352)
|++.+|+++ .|+.|++|++.... .....+ .....+|...|.+++|+|++ .+|++|+.||.|++||++....
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITD----RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEE----EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCCCEEEEe-CCCeEEEEECCCCC----ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 999999998 79999999876321 111111 11234788999999999998 9999999999999999864332
Q ss_pred ccCCCCccceeeEEeecc-----------cCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccc
Q 018675 249 QSGDGYASWRHLCTISGY-----------HDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA 316 (352)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (352)
.. .....+... +...+.+++|++++ ++++++. +.+++|+..... ..+....+
T Consensus 262 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~--------~~~~~~~~ 325 (447)
T 3dw8_B 262 CD-------RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN--------RPVETYQV 325 (447)
T ss_dssp SC-------TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS--------SCSCCEES
T ss_pred cc-------ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc--------cccceeec
Confidence 10 001111111 12379999999987 6777777 999999875311 11222334
Q ss_pred cCc---------------ceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 317 HDM---------------DVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 317 h~~---------------~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
|.. .+..++|+|+++ +|++++.||.|+|||+..+
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTC
T ss_pred cccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCC
Confidence 432 134599999986 5789999999999998653
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.4e-31 Score=231.58 Aligned_cols=256 Identities=18% Similarity=0.309 Sum_probs=192.5
Q ss_pred cceecceEEEEECCCCCEE-EEEeC---CCcEEEEEccCCceeeeEeeccccCCeeEEEECCC---CcEEEEeeCCCcEE
Q 018675 71 EMHTRTVRSCAWSPSGKLL-ATASF---DATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVW 143 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l-~s~~~---d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~ 143 (352)
..|...|++++|+|+++.+ ++|+. |+.+++|+..+++...... .+|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 4588999999999999654 56665 9999999988766443333 368999999999998 69999999999999
Q ss_pred EEecCCCCeeEEEEEeecCccCeeEEEE------cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccE
Q 018675 144 IWEVMPGNEFECVSVLQGHAQDVKMVQW------HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI 217 (352)
Q Consensus 144 vwd~~~~~~~~~~~~~~~h~~~v~~~~~------~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i 217 (352)
+||+..+. ..+..+.+|...|.++.| +|++..|++++.|+.|++|++..... ....+......+...+
T Consensus 94 iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 94 IWNLEAPE--MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD----PVANMEPVQGENKRDC 167 (357)
T ss_dssp EECTTSCS--SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS----CSEEECCCTTSCCCCE
T ss_pred EEeCCCCC--ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC----cceeccccCCCCCCce
Confidence 99987654 134567789999999955 67899999999999999998765421 1122221111224488
Q ss_pred EEEE----EcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC----CceEEecCCCC
Q 018675 218 WALS----FNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR----EGIIASGAADD 289 (352)
Q Consensus 218 ~~l~----~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~s~~~d~ 289 (352)
.++. |+|++.+|++++.||.|++||++..+. .....+...+.++.|++ +.++++++.|+
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-------------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-------------RWETNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp EEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-------------EEEEECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred EEEEEEeccCCCCCEEEEEccCCeEEEEECccCce-------------eeecCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 8888 788999999999999999999864321 11123567899999997 45899999999
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+++|+........ ........+|...|++++|+|+++.+|++++.||.|++|++..
T Consensus 235 ~i~i~d~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 235 KFHVFDMRTQHPTK----GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEEEETTT----EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred eEEEEeCcCCCccc----ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 99999765321110 1111123489999999999999875789999999999999874
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-32 Score=245.68 Aligned_cols=304 Identities=13% Similarity=0.154 Sum_probs=205.7
Q ss_pred eeecCCccceEEEEEccCCC----CCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-CCCEE
Q 018675 15 QTLEGHTDRVWSLAWKPTAG----VDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLL 89 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~----~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l 89 (352)
.++..|...+..+.+.|... ..+.+..+++++ .|+... + ....+...|...|++++|+| ++++|
T Consensus 11 ~~~~~~~~~l~~~~~~p~~~~~~~f~~~~~~~~~~~------~w~~~g-~----~~~~~~~~h~~~V~~~~~s~~~~~~l 79 (437)
T 3gre_A 11 GDVESIEKFLSTFKILPPLRDYKEFGPIQEIVRSPN------MGNLRG-K----LIATLMENEPNSITSSAVSPGETPYL 79 (437)
T ss_dssp ---CCCGGGTTCC-CCCCGGGCGGGCCCCCCCCCCC------GGGCCC-C----EEEEECTTTTSCEEEEEEECSSSCEE
T ss_pred CChhHHHHHhccCCCCCChhchhhcCCccccccccc------cccccc-e----EEeeeccCCCCceEEEEECCCCCCEE
Confidence 34455666666666666311 012234444443 476433 1 22233355889999999999 99999
Q ss_pred EEEeCCCcEEEEEccC---Cc-eeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC---CCCeeE-----EEE
Q 018675 90 ATASFDATTCIWEDVG---GD-YECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM---PGNEFE-----CVS 157 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~---~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~---~~~~~~-----~~~ 157 (352)
++|+.|++|++||..+ +. ..+...+ +|.+.|++++|+|++++|++++.|++|++||+. .+.... .+.
T Consensus 80 ~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~ 158 (437)
T 3gre_A 80 ITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIR 158 (437)
T ss_dssp EEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeE
Confidence 9999999999999755 32 1122333 589999999999999999999999999999984 332211 111
Q ss_pred Eee--c--CccCeeEEE--EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 158 VLQ--G--HAQDVKMVQ--WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 158 ~~~--~--h~~~v~~~~--~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
.+. . +...+.++. ++|++.++++++.|+.|++|++... .....+.. ..|...|.+++|+|++.+|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s 231 (437)
T 3gre_A 159 KINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL-----ERLQIIEN--SPRHGAVSSICIDEECCVLIL 231 (437)
T ss_dssp EEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC-----CEEEEEEC--CGGGCCEEEEEECTTSCEEEE
T ss_pred EEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----eeeEEEcc--CCCCCceEEEEECCCCCEEEE
Confidence 121 1 445566666 5678899999999999999987653 23333321 127889999999999999999
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC----Cc-eEEecCCCCeEEEEEccCCccccCcc
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR----EG-IIASGAADDSVQFFVESKDDLIDGPS 306 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~-~~~s~~~d~~v~~~~~~~~~~~~~~~ 306 (352)
|+.||.|++||++... ....+...+...+.++.+.+ ++ ++++++.|+.+++|+...........
T Consensus 232 ~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 232 GTTRGIIDIWDIRFNV-----------LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp EETTSCEEEEETTTTE-----------EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred EcCCCeEEEEEcCCcc-----------EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 9999999999986321 22222223455788886654 44 89999999999999876433211000
Q ss_pred cc-------ee--------eecccc--cCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 307 YK-------ML--------LKKEKA--HDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 307 ~~-------~~--------~~~~~~--h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.. .. -....+ |...|++++|+ ++ .+|++++.||.|++||+..
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 301 NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETTC
T ss_pred cCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECCC
Confidence 00 00 001123 88899999999 55 4688999999999999865
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-32 Score=248.63 Aligned_cols=251 Identities=11% Similarity=0.146 Sum_probs=189.3
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceec-----ceEEEEECCCCCEEEEEe
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR-----TVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~s~~ 93 (352)
+|.+.|++++|+|+ ++.||+++.||+|++|+.+. +...+ . |.. .|.+++|||||++||+|+
T Consensus 83 ~~~~~V~~vawSPd------G~~LAs~s~dg~V~iwd~~~------~l~~l-~-~~~~~~~~sv~svafSPDG~~LAsgs 148 (588)
T 2j04_A 83 QPVCYPRVCKPSPI------DDWMAVLSNNGNVSVFKDNK------MLTNL-D-SKGNLSSRTYHCFEWNPIESSIVVGN 148 (588)
T ss_dssp SCSCCEEEEEECSS------SSCEEEEETTSCEEEEETTE------EEEEC-C-CSSCSTTTCEEEEEECSSSSCEEEEE
T ss_pred CCCCcEEEEEECCC------CCEEEEEeCCCcEEEEeCCc------eeeec-c-CCCccccccEEEEEEcCCCCEEEEEc
Confidence 67889999999997 57899999999999999543 11122 2 443 599999999999999999
Q ss_pred CCCcEEEEEccCCce-----eeeEee----ccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe-ecCc
Q 018675 94 FDATTCIWEDVGGDY-----ECVATL----EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHA 163 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~-----~~~~~~----~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-~~h~ 163 (352)
.||+|++|+..++.. ..+.++ .+|.+.|.+++|+|+| +++++.|++|++||+...........+ .+|.
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASR 226 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCS
T ss_pred CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccccc
Confidence 999999999877642 134554 6788899999999999 888999999999998765422223345 3788
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEE--cCCCCEEEEEeCCCcEEEE
Q 018675 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF--NAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~--~~~~~~l~s~~~dg~i~iw 241 (352)
..|.+++|+ +..+++++ ++.|++|++.... .... ..+|...|..+.| +|++..+++++.||+ |+|
T Consensus 227 ~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~------~~~~---~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw 293 (588)
T 2j04_A 227 RKITDLKIV--DYKVVLTC-PGYVHKIDLKNYS------ISSL---KTGSLENFHIIPLNHEKESTILLMSNKTSY-KVL 293 (588)
T ss_dssp SCCCCEEEE--TTEEEEEC-SSEEEEEETTTTE------EEEE---ECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEE
T ss_pred CcEEEEEEE--CCEEEEEe-CCeEEEEECCCCe------EEEE---EcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEE
Confidence 899999999 57888887 6999999876531 1111 1269999999999 999999999999999 999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcce
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDV 321 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 321 (352)
..+ .+.+++++.+.+. .|+.+++|....+. +... .+...|
T Consensus 294 ~~d----------------------------~~~~spd~~l~a~-~d~~v~lW~~~g~~----------l~~~-~~~~~I 333 (588)
T 2j04_A 294 LED----------------------------ELHVTADNIIAPY-LEKKFKKWSTIWNE----------FNNY-ETTLVI 333 (588)
T ss_dssp ESS----------------------------SEEEECCCSSHHH-HHHHHHHTTTTTTS----------SSSS-CCEEEE
T ss_pred eec----------------------------cEEECCCceEEEE-cCCEEEEEECCCCc----------eeee-ccceEE
Confidence 753 0234566644444 38888888442211 1122 336779
Q ss_pred eEEEecCCCcceEEEecC
Q 018675 322 NSVQWSPGERRLLASASD 339 (352)
Q Consensus 322 ~~~~~sp~~~~~l~s~~~ 339 (352)
++++|||||+ ++|+++.
T Consensus 334 ~~va~SPdG~-~lA~~~~ 350 (588)
T 2j04_A 334 HGISLSPDGY-SIAIVYD 350 (588)
T ss_dssp EEEEECTTSS-EEEEEEE
T ss_pred EEEEECCCCC-EEEEEEe
Confidence 9999999996 6777763
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.4e-30 Score=227.79 Aligned_cols=258 Identities=14% Similarity=0.090 Sum_probs=193.4
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEec-
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEV- 147 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~- 147 (352)
..|...|++++|+|++++|++++.|+.|++|+..++. ......+.+|...|.+++|+|+++ +|++++.|+.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 4588999999999999999999999999999987654 122344558999999999999999 9999999999999998
Q ss_pred CCCCeeEEEEEeec--CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 148 MPGNEFECVSVLQG--HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 148 ~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
..+. ...+.+ |...|.+++|+| +..+++++.|+.|++|++.................. .|...|.+++|+|+
T Consensus 88 ~~~~----~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 88 GSPS----FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-KVKNKIFTMDTNSS 161 (342)
T ss_dssp SSSS----EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-SSCCCEEEEEECSS
T ss_pred cCCc----eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE-eeCCceEEEEecCC
Confidence 6553 255677 999999999999 999999999999999986531100000000111111 37789999999998
Q ss_pred CCEEEEEeCCCcEEEEcCCc-cccccCCCCccceeeEEeecccCcceEEEEecC-C-ceEEecCCCCeEEEEEccCCccc
Q 018675 226 GDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-E-GIIASGAADDSVQFFVESKDDLI 302 (352)
Q Consensus 226 ~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~s~~~d~~v~~~~~~~~~~~ 302 (352)
+ +++++.|+.|++||++. ... ........+...+.++.+++ + .++++++.|+.+++|+.......
T Consensus 162 ~--l~~~~~d~~i~i~d~~~~~~~----------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~ 229 (342)
T 1yfq_A 162 R--LIVGMNNSQVQWFRLPLCEDD----------NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDD 229 (342)
T ss_dssp E--EEEEESTTEEEEEESSCCTTC----------CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCS
T ss_pred c--EEEEeCCCeEEEEECCccccc----------cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcc
Confidence 7 99999999999999864 211 01112234566789999998 5 48999999999999976543000
Q ss_pred cCcccceeeecccc---------cCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 303 DGPSYKMLLKKEKA---------HDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 303 ~~~~~~~~~~~~~~---------h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
... ........ |...|++++|+|+++ +|++++.||.|++||+..
T Consensus 230 ~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 230 YNS---SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp TTC---TTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTT
T ss_pred ccc---ccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCcc
Confidence 000 01112233 455999999999986 678999999999999875
No 100
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.7e-30 Score=227.16 Aligned_cols=272 Identities=18% Similarity=0.335 Sum_probs=200.1
Q ss_pred eeecceecceEEEEECCC----CCEEEEEeCCCcEEEEEccCCcee-eeEee--ccccCCeeEEEECCC----CcEEEEe
Q 018675 68 VLEEMHTRTVRSCAWSPS----GKLLATASFDATTCIWEDVGGDYE-CVATL--EGHENEVKSVSWNAS----GTLLATC 136 (352)
Q Consensus 68 ~~~~~h~~~v~~~~~s~~----~~~l~s~~~d~~i~i~~~~~~~~~-~~~~~--~~h~~~v~~v~~~~~----~~~l~s~ 136 (352)
.+...|..+|++++|+|+ ...+++++.++.|++|+..+++.. .+... ..|...|.+++|+|+ +.+|+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 344569999999999984 456666777779999998754321 12211 126678999999998 6799999
Q ss_pred eCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 137 GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 137 ~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
+.|+.|++||+..+. .+..+.+|...|.+++|+| ++.+|++++.|+.|++|++... .....+ ....+|..
T Consensus 92 ~~dg~i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~-~~~~~~~~ 162 (366)
T 3k26_A 92 GSRGIIRIINPITMQ---CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD-----TLVAIF-GGVEGHRD 162 (366)
T ss_dssp ETTCEEEEECTTTCC---EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT-----EEEEEE-CSTTSCSS
T ss_pred cCCCEEEEEEchhce---EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC-----eEEEEe-cccccccC
Confidence 999999999987654 4566778999999999999 8999999999999999987643 222222 12246889
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccC-----------CCC--c---cceeeEEeecccCcceEEEEecCC
Q 018675 216 TIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG-----------DGY--A---SWRHLCTISGYHDRTIFSVHWSRE 279 (352)
Q Consensus 216 ~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----------~~~--~---~~~~~~~~~~~~~~~i~~~~~~~~ 279 (352)
.|.+++|+|++.+|++++.||.|++||++..+.... ... . ...........|...+.++.++ +
T Consensus 163 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~ 241 (366)
T 3k26_A 163 EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-G 241 (366)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-T
T ss_pred ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-C
Confidence 999999999999999999999999999864321100 000 0 0000011112367788899998 6
Q ss_pred ceEEecCCCCeEEEEEccCCccc-----cCcccceeeecccccCcceeEEEecCC--CcceEEEecCCCeEEEEeecc
Q 018675 280 GIIASGAADDSVQFFVESKDDLI-----DGPSYKMLLKKEKAHDMDVNSVQWSPG--ERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 280 ~~~~s~~~d~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~h~~~i~~~~~sp~--~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.++++++.|+.+++|+....... ........+....+|...|++++|+|+ ++ +|++++.||.|++|++..
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTSCEEEEECCS
T ss_pred CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCCcEEEEECCC
Confidence 79999999999999987543221 011112334556789999999999998 75 688999999999999975
No 101
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-30 Score=230.23 Aligned_cols=222 Identities=28% Similarity=0.496 Sum_probs=180.2
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CCEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GKLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l 89 (352)
..+..+.+|.+.|++++|+|+.. +.+|++++.|++|++|++.++.. .... ....|...|.+++|+|+ +++|
T Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~~----~~~l~s~~~dg~v~iwd~~~~~~--~~~~-~~~~~~~~v~~~~~~~~~~~~~l 118 (379)
T 3jrp_A 46 KLIDTLTGHEGPVWRVDWAHPKF----GTILASCSYDGKVLIWKEENGRW--SQIA-VHAVHSASVNSVQWAPHEYGPLL 118 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGG----CSEEEEEETTSCEEEEEEETTEE--EEEE-EECCCSSCEEEEEECCGGGCSEE
T ss_pred eeeeEecCCCCcEEEEEeCCCCC----CCEEEEeccCCEEEEEEcCCCce--eEee-eecCCCcceEEEEeCCCCCCCEE
Confidence 34457889999999999987521 47999999999999999987641 1111 22347889999999999 9999
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-------------CCcEEEEeeCCCcEEEEecCCCCe-eEE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-------------SGTLLATCGRDKSVWIWEVMPGNE-FEC 155 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-------------~~~~l~s~~~d~~v~vwd~~~~~~-~~~ 155 (352)
++++.|+.+++||...........+.+|...|.+++|+| ++.+|++++.|+.|++||+..... ...
T Consensus 119 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 198 (379)
T 3jrp_A 119 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 198 (379)
T ss_dssp EEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEE
T ss_pred EEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceee
Confidence 999999999999987764444556778999999999999 689999999999999999875543 345
Q ss_pred EEEeecCccCeeEEEEcCC---CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 156 VSVLQGHAQDVKMVQWHPT---MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 156 ~~~~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
...+.+|...|.+++|+|+ +.+|++++.|+.|++|++........ ..+ .....|...|.+++|+|++.+|+++
T Consensus 199 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~-~~~~~~~~~v~~~~~s~~g~~l~~~ 274 (379)
T 3jrp_A 199 ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK---KTL-LKEEKFPDVLWRASWSLSGNVLALS 274 (379)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCE---EEE-SSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred EEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccce---eee-eccccCCCcEEEEEEcCCCCEEEEe
Confidence 5677889999999999999 89999999999999998865422111 111 1223578899999999999999999
Q ss_pred eCCCcEEEEcCC
Q 018675 233 SDDLTIKIWGAD 244 (352)
Q Consensus 233 ~~dg~i~iwd~~ 244 (352)
+.||.|++|+++
T Consensus 275 ~~dg~i~iw~~~ 286 (379)
T 3jrp_A 275 GGDNKVTLWKEN 286 (379)
T ss_dssp ESSSSEEEEEEE
T ss_pred cCCCcEEEEeCC
Confidence 999999999875
No 102
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.6e-29 Score=223.01 Aligned_cols=299 Identities=12% Similarity=0.161 Sum_probs=197.0
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE-E
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL-A 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~ 90 (352)
..+.++++|.+.|++++|+|+ +++|++|+.| .+++|+..+...... .+...+..+++.++++.+ +
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~d------g~~la~g~~~-~~~iw~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 75 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQD------QSCLILSTLK-SFEIYNVHPVAHIMS-------QEMRHLSKVRMLHRTNYVAF 75 (355)
T ss_dssp ---------CCCCCEEEECTT------SSEEEEECSS-EEEEEEETTEEEEEE-------EECSCCCEEEECTTSSEEEE
T ss_pred CCccccccCCCceEEEEECCC------CCEEEEEcCC-EEEEEecCCcceeee-------eecCCeEEEEEcCCCCEEEE
Confidence 344567899999999999997 5788888766 578999876432111 122357888899988877 5
Q ss_pred EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCC-CeeEEEEEeecCccCeeEE
Q 018675 91 TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPG-NEFECVSVLQGHAQDVKMV 169 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~h~~~v~~~ 169 (352)
+++.|+++++||..+++ ++..+. |...|.++.|+++. ++.+ .|++|++||+... +.... +.. ....+
T Consensus 76 ~~~~d~~v~iWd~~~~~--~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~---~~~---~~~~~ 143 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQ--DVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITD---DIR---FGGVC 143 (355)
T ss_dssp ECSSTTEEEEEETTTTE--EEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSC---CEE---EEEEE
T ss_pred EECCccEEEEEECCCCc--EEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEE---ecc---CCceE
Confidence 67788999999987764 344554 67799999998864 3333 4789999999765 32221 221 23345
Q ss_pred EEcCCCCEEEE--EeCCCcEEEEecCCCCCCC-----c--eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCc-EE
Q 018675 170 QWHPTMDVLFS--CSYDNTIKVWWAEDTDSDN-----W--HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLT-IK 239 (352)
Q Consensus 170 ~~~~~~~~l~s--~~~d~~i~iw~~~~~~~~~-----~--~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~-i~ 239 (352)
++++ ..++. |+.|+.|++|++....... . ...........+|...|.+++|+|++.+|++|+.|++ |+
T Consensus 144 ~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~ 221 (355)
T 3vu4_A 144 EFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIR 221 (355)
T ss_dssp EEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEE
T ss_pred EEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEE
Confidence 5666 55655 5789999999986532000 0 0000001123479999999999999999999999998 99
Q ss_pred EEcCCccccccCCCCccceeeEEee-cccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccce-e------
Q 018675 240 IWGADITRMQSGDGYASWRHLCTIS-GYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKM-L------ 310 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~-~------ 310 (352)
+||++.. .....+. +.|...+.+++|+|++ ++++++.|+++++|+.............. +
T Consensus 222 iwd~~~~-----------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T 3vu4_A 222 VFKTEDG-----------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQ 290 (355)
T ss_dssp EEETTTC-----------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCC
T ss_pred EEECCCC-----------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccc
Confidence 9997532 2233444 3377889999999976 79999999999999875432111000000 0
Q ss_pred -------eecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 311 -------LKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 311 -------~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
......+......++|+|+++ .+++++.||.+++|++..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~a~~~d~~-~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 291 SEWSLCNFKLSVDKHVRGCKIAWISESS-LVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp CSSCSEEEECCCCTTCCCCEEEESSSSE-EEEEETTTTEEEEEEEEE
T ss_pred cccceeEEEeccCCCCCceEEEEeCCCC-EEEEEeCCCeEEEEEEEc
Confidence 001112233457799999986 577899999999999753
No 103
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.7e-30 Score=230.16 Aligned_cols=263 Identities=17% Similarity=0.197 Sum_probs=197.9
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCc---cEEEEeeCCCeEEEEecCCCceeeeeeeeeecce-----ecceEEEEEC-
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVA---PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH-----TRTVRSCAWS- 83 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~---~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~s- 83 (352)
.+.++.+|...|++++|+|+. ...+ .+|++++.|+.|++|++.+..............| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~--~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 131 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAI--ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 131 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEE--ETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEEC
T ss_pred cceEEecCCCcEEEEEEeccc--ccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEee
Confidence 466788999999999999960 0014 5899999999999999876543100001111335 5899999999
Q ss_pred ---CCCCE-EEEEeCCCcEEEEEccC------Cceee---eEee-------ccccCCeeEEEECCCCcEEEEeeCCCcEE
Q 018675 84 ---PSGKL-LATASFDATTCIWEDVG------GDYEC---VATL-------EGHENEVKSVSWNASGTLLATCGRDKSVW 143 (352)
Q Consensus 84 ---~~~~~-l~s~~~d~~i~i~~~~~------~~~~~---~~~~-------~~h~~~v~~v~~~~~~~~l~s~~~d~~v~ 143 (352)
|+++. |++++.|+.+++||... +.... ...+ ..|...|.+++|+|++ +|++++.|+.|+
T Consensus 132 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~ 210 (397)
T 1sq9_A 132 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQ 210 (397)
T ss_dssp CC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEE
T ss_pred ccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEE
Confidence 99999 99999999999999876 32111 1134 4588899999999999 999999999999
Q ss_pred EEecCCCCeeEEEEEeec---C---ccCeeEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceeEeeeec------
Q 018675 144 IWEVMPGNEFECVSVLQG---H---AQDVKMVQWHPTMDVLFSCSYD---NTIKVWWAEDTDSDNWHCVQTISE------ 208 (352)
Q Consensus 144 vwd~~~~~~~~~~~~~~~---h---~~~v~~~~~~~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~------ 208 (352)
+||+... ..+..+.. | ...+.+++|+|++.+|++++.| +.|++|++... .....+..
T Consensus 211 i~d~~~~---~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~-----~~~~~~~~~~~~~~ 282 (397)
T 1sq9_A 211 ISELSTL---RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG-----ERIGSLSVPTHSSQ 282 (397)
T ss_dssp EEETTTT---EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-----CEEEEECBC-----
T ss_pred EEECCCC---ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC-----cccceeccCccccc
Confidence 9999754 34556667 8 8899999999999999999999 99999987643 22333321
Q ss_pred ---cCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeec-----cc-------------
Q 018675 209 ---SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG-----YH------------- 267 (352)
Q Consensus 209 ---~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~------------- 267 (352)
....|...|.+++|+|++.+|++++.||.|++||++..+ ....+.. .|
T Consensus 283 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (397)
T 1sq9_A 283 ASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE-----------RITTLNMHCDDIEIEEDILAVDEHGDS 351 (397)
T ss_dssp ---CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----------EEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred ccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc-----------eeEEEecccCcccchhhhhcccccccc
Confidence 001188999999999999999999999999999986322 1222220 12
Q ss_pred --CcceEEEEecCCc-----------eEEecCCCCeEEEEEcc
Q 018675 268 --DRTIFSVHWSREG-----------IIASGAADDSVQFFVES 297 (352)
Q Consensus 268 --~~~i~~~~~~~~~-----------~~~s~~~d~~v~~~~~~ 297 (352)
...+.+++|++++ ++++++.|+.+++|+..
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred ccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 7789999999985 89999999999999653
No 104
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=8.4e-29 Score=223.35 Aligned_cols=243 Identities=22% Similarity=0.402 Sum_probs=194.2
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
+|...|++++|+|+ +.+|++++.||.|++|++.++..... + ..|...|.+++| +++.+++|+.|+.+
T Consensus 132 ~~~~~v~~v~~s~~------~~~l~~~~~dg~i~iwd~~~~~~~~~----~-~~~~~~v~~~~~--~~~~l~~~~~dg~i 198 (401)
T 4aez_A 132 DESTYVASVKWSHD------GSFLSVGLGNGLVDIYDVESQTKLRT----M-AGHQARVGCLSW--NRHVLSSGSRSGAI 198 (401)
T ss_dssp CTTCCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEEEE----E-CCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred CCCCCEEEEEECCC------CCEEEEECCCCeEEEEECcCCeEEEE----e-cCCCCceEEEEE--CCCEEEEEcCCCCE
Confidence 38999999999996 57999999999999999987653222 2 358899999999 56899999999999
Q ss_pred EEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC-E
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-V 177 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 177 (352)
++||..... .....+.+|.+.|.+++|+|++.+|++++.|+.|++||+.... .+..+..|...+.+++|+|++. +
T Consensus 199 ~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~p~~~~l 274 (401)
T 4aez_A 199 HHHDVRIAN-HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI---PKFTKTNHNAAVKAVAWCPWQSNL 274 (401)
T ss_dssp EEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS---EEEEECCCSSCCCEEEECTTSTTE
T ss_pred EEEecccCc-ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC---ccEEecCCcceEEEEEECCCCCCE
Confidence 999987433 3466778899999999999999999999999999999997643 4556778999999999999764 5
Q ss_pred EEEEe--CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE--eCCCcEEEEcCCccccccCCC
Q 018675 178 LFSCS--YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC--SDDLTIKIWGADITRMQSGDG 253 (352)
Q Consensus 178 l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~ 253 (352)
+++++ .|+.|++|++... .....+ .+...|.+++|+|++.+++++ +.||.|++|++.....
T Consensus 275 l~~~~gs~d~~i~i~d~~~~-----~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~----- 339 (401)
T 4aez_A 275 LATGGGTMDKQIHFWNAATG-----ARVNTV-----DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL----- 339 (401)
T ss_dssp EEEECCTTTCEEEEEETTTC-----CEEEEE-----ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE-----
T ss_pred EEEecCCCCCEEEEEECCCC-----CEEEEE-----eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc-----
Confidence 66655 7999999987643 223333 245789999999999999984 4899999998753211
Q ss_pred CccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 254 YASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
.....+ ..|...+.++.|++++ ++++++.|+.+++|+...
T Consensus 340 ----~~~~~~-~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 340 ----TKQVDI-PAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp ----EEEEEE-ECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred ----eeEEEe-cCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 111122 2467789999999976 799999999999997654
No 105
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-28 Score=217.02 Aligned_cols=251 Identities=16% Similarity=0.257 Sum_probs=202.3
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+.++.+|.+.|++++|+|+ +++|++++.|++|++|++.+++.... + .|...|.+++|+|+++.+++
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~~~~~~~~----~--~~~~~v~~~~~~~~~~~l~~ 132 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCF------TKYCVTGSADYSIKLWDVSNGQCVAT----W--KSPVPVKRVEFSPCGNYFLA 132 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTT------SSEEEEEETTTEEEEEETTTCCEEEE----E--ECSSCEEEEEECTTSSEEEE
T ss_pred hhhhhhhhcCCcEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCcEEEE----e--ecCCCeEEEEEccCCCEEEE
Confidence 456678899999999999996 47999999999999999987653322 2 26788999999999999999
Q ss_pred EeCC-----CcEEEEEccCCce---------eeeEeeccccC--CeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEE
Q 018675 92 ASFD-----ATTCIWEDVGGDY---------ECVATLEGHEN--EVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFEC 155 (352)
Q Consensus 92 ~~~d-----~~i~i~~~~~~~~---------~~~~~~~~h~~--~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 155 (352)
++.+ +.+.+|+...... .....+..|.+ .+.+++|+|++++|++++.|+.|++||+.... ..
T Consensus 133 ~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~ 210 (369)
T 3zwl_B 133 ILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY--EY 210 (369)
T ss_dssp EECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT--EE
T ss_pred ecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc--Ee
Confidence 9999 9999999754421 12334455666 89999999999999999999999999987532 34
Q ss_pred EEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC
Q 018675 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235 (352)
Q Consensus 156 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d 235 (352)
+..+..|...+.+++|+|++.+|++++.|+.|++|++... .....+. +...+.+++|+|++.++++++.+
T Consensus 211 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 211 VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL-----QVLKKYE-----TDCPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CEEEEEE-----CSSCEEEEEECSSSSEEEEEECC
T ss_pred EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC-----ceeeeec-----CCCCceeEEecCCCceEEEeecC
Confidence 6677889999999999999999999999999999987543 2233332 56789999999999999999998
Q ss_pred C--------------cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 236 L--------------TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 236 g--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
+ .+++||....+ ....+ ..|...+.++.|++++ ++++++.|+.+++|+...
T Consensus 281 ~~~~~~~~~~~~~~~~i~~~d~~~~~-----------~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 281 EAKDVTTTSANEGKFEARFYHKIFEE-----------EIGRV-QGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp C-------------CEEEEEETTTCC-----------EEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CCceEEEEecCCCcceeEEEecCCCc-----------chhhe-ecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 8 78888864321 22222 2367789999999876 799999999999997654
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.9e-29 Score=227.57 Aligned_cols=257 Identities=22% Similarity=0.320 Sum_probs=194.7
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceee---eeeeeeecceecceEEEEECCCC-CEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFW---NCKAVLEEMHTRTVRSCAWSPSG-KLL 89 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~---~~~~~~~~~h~~~v~~~~~s~~~-~~l 89 (352)
+..+.+|.+.|++++|+|.+ +.+|++|+.|++|++|++.+..... ..... ...|...|.+++|+|++ ++|
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~-----~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~l 147 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHN-----DNVIASGSEDCTVMVWEIPDGGLVLPLREPVIT-LEGHTKRVGIVAWHPTAQNVL 147 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTC-----TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEE-EECCSSCEEEEEECSSBTTEE
T ss_pred CceEecCCCCEEEEEeCCCC-----CCEEEEEeCCCeEEEEEccCCCCccccCCceEE-ecCCCCeEEEEEECcCCCCEE
Confidence 34577999999999999943 4799999999999999987753111 11111 23588999999999998 699
Q ss_pred EEEeCCCcEEEEEccCCceeeeEee--ccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe-ecCccC-
Q 018675 90 ATASFDATTCIWEDVGGDYECVATL--EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQD- 165 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-~~h~~~- 165 (352)
++++.|+.|++||..+++ +...+ .+|...|.+++|+|++++|++++.|++|++||++.+. .+..+ .+|...
T Consensus 148 ~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~ 222 (402)
T 2aq5_A 148 LSAGCDNVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT---VVAEKDRPHEGTR 222 (402)
T ss_dssp EEEETTSCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE---EEEEEECSSCSSS
T ss_pred EEEcCCCEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc---eeeeeccCCCCCc
Confidence 999999999999987763 45566 7899999999999999999999999999999987653 34455 577755
Q ss_pred eeEEEEcCCCCEEEEE---eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE-EeCCCcEEEE
Q 018675 166 VKMVQWHPTMDVLFSC---SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS-CSDDLTIKIW 241 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~---~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s-~~~dg~i~iw 241 (352)
+.++.|+|++.+++++ +.|+.|++|++...... . .... ..|...+.+++|+|++.+|++ |+.||.|++|
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-~-~~~~-----~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP-L-SLQE-----LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC-S-EEEE-----CCCCSSCEEEEEETTTTEEEEEETTCSCEEEE
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC-c-eEEe-----ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEE
Confidence 8899999999999998 78999999987653211 0 1111 145678999999999999875 5579999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccC
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESK 298 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~ 298 (352)
+++..+. ....+..+. +...+.+++|++++.+++. .++.+++|....
T Consensus 296 d~~~~~~-------~~~~l~~~~--~~~~v~~~~~sp~~~~~~s-~~~~~~~~~l~~ 342 (402)
T 2aq5_A 296 EITSEAP-------FLHYLSMFS--SKESQRGMGYMPKRGLEVN-KCEIARFYKLHE 342 (402)
T ss_dssp EECSSTT-------CEEEEEEEC--CSSCCSEEEECCGGGSCGG-GTEEEEEEEEET
T ss_pred EecCCCc-------ceEeecccc--cCCcccceEEeccccccee-cceeEEEEEcCC
Confidence 9753221 001111111 4577899999998855443 566899997654
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2.1e-30 Score=233.19 Aligned_cols=253 Identities=13% Similarity=0.095 Sum_probs=166.4
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--------CCCEEEEEeCCCcEEEEEccCCceee
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--------SGKLLATASFDATTCIWEDVGGDYEC 110 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--------~~~~l~s~~~d~~i~i~~~~~~~~~~ 110 (352)
+.++|+++.|++|+||+...+.............|...|++++|+| |+++||+|+.|++++|||..++. +
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~--~ 178 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG--P 178 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--E
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--e
Confidence 4689999999999999988764322211122356999999999998 88999999999999999987653 3
Q ss_pred eEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEE----------------------EEEeecCccCee
Q 018675 111 VATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFEC----------------------VSVLQGHAQDVK 167 (352)
Q Consensus 111 ~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~----------------------~~~~~~h~~~v~ 167 (352)
...+.+|...|.+++|+|++. +|++++.|++|++||+..+..... .....+|...+.
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 455667899999999999874 799999999999999875432111 111246777888
Q ss_pred EEEEc-CCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 168 MVQWH-PTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 168 ~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
++.|+ |++..+++++.|+.+++|++..... ... ...|...+..+.+.|+...+........
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~-----~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 320 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANND-----YNE----ISDSTMKLGPKNLLPNVQGISLFPSLLG--------- 320 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC----------------------------CCSCSEEEECSSCCSSC---------
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCC-----Cce----EeeecCccccEEEccccccccccCccee---------
Confidence 99986 7899999999999999998754321 111 1235555666666655432211111000
Q ss_pred ccccCCCCccceeeEEeecccCcceEEEEe-cCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEE
Q 018675 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHW-SREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324 (352)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 324 (352)
...+ ..++ ++++|+.|+.|++|+...... .....+|...|+++
T Consensus 321 --------------------------~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~---------~~~~~~~~~~V~sv 365 (393)
T 4gq1_A 321 --------------------------ACPHPRYMDYFATAHSQHGLIQLINTYEKDS---------NSIPIQLGMPIVDF 365 (393)
T ss_dssp --------------------------CEECSSCTTEEEEEETTTTEEEEEETTCTTC---------CEEEEECSSCEEEE
T ss_pred --------------------------EEEccCCCCEEEEEECCCCEEEEEECCCCcE---------EEEecCCCCcEEEE
Confidence 0011 1123 567788899999997643221 12335688899999
Q ss_pred EecCCCcceEEEecCCCeEEEEee
Q 018675 325 QWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 325 ~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
+|||||+ +||+++.||. .+|.+
T Consensus 366 afspdG~-~LA~as~~Gv-~lvrL 387 (393)
T 4gq1_A 366 CWHQDGS-HLAIATEGSV-LLTRL 387 (393)
T ss_dssp EECTTSS-EEEEEESSEE-EEEEE
T ss_pred EEcCCCC-EEEEEeCCCe-EEEEE
Confidence 9999997 6889987774 44443
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5e-29 Score=220.11 Aligned_cols=264 Identities=11% Similarity=0.032 Sum_probs=184.7
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCC-------ceeee
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG-------DYECV 111 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~-------~~~~~ 111 (352)
+.+++||+.||+|++|++.+++..... ....|.++.|+|+ +++++.|+++++|+.... ....+
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~-------~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTI-------TTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEE-------EEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEE-------ecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 578999999999999999877543222 1467888889988 999999999999975421 01112
Q ss_pred -EeeccccCCeeEEEECC--CCcEEEEeeCCCcEEEEecCCCCeeEEEEEe-ecCccCeeEEEEcCCCCEEEEEeCCCcE
Q 018675 112 -ATLEGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPGNEFECVSVL-QGHAQDVKMVQWHPTMDVLFSCSYDNTI 187 (352)
Q Consensus 112 -~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~i 187 (352)
....+|.+.|.+++|+| ++++|++++.|++|++||+..+.. .... ..|...+.+++|+|++.++++|+.|+.|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 22236778999999999 999999999999999999976653 3333 3455579999999999999999999999
Q ss_pred EEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc-CCCCccceeeEEeecc
Q 018675 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS-GDGYASWRHLCTISGY 266 (352)
Q Consensus 188 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~ 266 (352)
++||+...... ...+. .+|..+|.+++|+|++.+|++++ |+.|++||++..+... ...+. .
T Consensus 195 ~iwd~~~~~~~----~~~~~---~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~----------~ 256 (343)
T 3lrv_A 195 DVYNLSSPDQA----SSRFP---VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYT----------I 256 (343)
T ss_dssp EEEESSCTTSC----CEECC---CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCB----------C
T ss_pred EEEECCCCCCC----ccEEe---ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccc----------c
Confidence 99998654311 01221 14899999999999999999999 5599999987533211 00000 0
Q ss_pred cCcce--EEEEecCCc-eEEecCC-CCeEEEEEccCCccccCcccceeeecccccCcceeEEEecC---CCcceEEEecC
Q 018675 267 HDRTI--FSVHWSREG-IIASGAA-DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP---GERRLLASASD 339 (352)
Q Consensus 267 ~~~~i--~~~~~~~~~-~~~s~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp---~~~~~l~s~~~ 339 (352)
+...+ .+++|++++ ++++++. |+.+++|....... ... . .++..++|+| +.+ .+++++.
T Consensus 257 ~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~----~~~----~-----~~~~~~~~~~~~~~~~-~l~~~~~ 322 (343)
T 3lrv_A 257 PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK----NWT----K-----DEESALCLQSDTADFT-DMDVVCG 322 (343)
T ss_dssp -----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC----SEE----E-----EEEEECCC----CCCC-EEEEEEE
T ss_pred ccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc----ceE----e-----cCceeEecCccccccc-eeEEEec
Confidence 11111 468899876 6777777 99999997643211 000 0 3466677776 554 3567777
Q ss_pred CCeEEEEe
Q 018675 340 DGMIKIWE 347 (352)
Q Consensus 340 Dg~i~iw~ 347 (352)
||.++++-
T Consensus 323 d~~~~~~~ 330 (343)
T 3lrv_A 323 DGGIAAIL 330 (343)
T ss_dssp TTEEEEEE
T ss_pred CCceEEEE
Confidence 88777764
No 109
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=2.1e-28 Score=222.11 Aligned_cols=248 Identities=24% Similarity=0.438 Sum_probs=195.2
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+..+.+|.+.|+|++|+|+ +.+||+|+.|++|++|++.+++.+.. ...|...+.++++ ++..|++|+
T Consensus 140 ~~~~~~~~~~V~sv~fspd------g~~lasgs~Dg~v~iWd~~~~~~~~~-----~~~h~~~v~~~s~--~~~~l~sgs 206 (420)
T 4gga_A 140 LLQMEQPGEYISSVAWIKE------GNYLAVGTSSAEVQLWDVQQQKRLRN-----MTSHSARVGSLSW--NSYILSSGS 206 (420)
T ss_dssp EEECCSTTCCEEEEEECTT------SSEEEEEETTSCEEEEETTTTEEEEE-----ECCCSSCEEEEEE--ETTEEEEEE
T ss_pred EEEecCCCCcEEEEEECCC------CCEEEEEECCCeEEEEEcCCCcEEEE-----EeCCCCceEEEee--CCCEEEEEe
Confidence 3455688999999999997 57999999999999999988754322 2458888888776 468999999
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe-eEEEEEeecCccCeeEEEEc
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWH 172 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~h~~~v~~~~~~ 172 (352)
.|+.+.+|+..... ..+..+.+|...+..+.|+|++.++++++.|+.+++|+...+.. ...+.....|...|.+++|+
T Consensus 207 ~d~~i~~~d~~~~~-~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~ 285 (420)
T 4gga_A 207 RSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWC 285 (420)
T ss_dssp TTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEEC
T ss_pred CCCceeEeeecccc-eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeC
Confidence 99999999976543 44667889999999999999999999999999999999865432 12345566788899999999
Q ss_pred CCCC-EEEE--EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe--CCCcEEEEcCCccc
Q 018675 173 PTMD-VLFS--CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS--DDLTIKIWGADITR 247 (352)
Q Consensus 173 ~~~~-~l~s--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~--~dg~i~iwd~~~~~ 247 (352)
|.+. .+++ |+.|+.|++|++... .+...+. +...+.++.|+|++..+++++ .|+.|+|||+...
T Consensus 286 p~~~~~la~~~gs~D~~I~iwd~~t~-----~~~~~~~-----~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~- 354 (420)
T 4gga_A 286 PWQSNVLATGGGTSDRHIRIWNVCSG-----ACLSAVD-----AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM- 354 (420)
T ss_dssp TTCTTEEEEEECTTTCEEEEEETTTT-----EEEEEEE-----CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-
T ss_pred CCcccEEEEEeecCCCEEEEEeCCcc-----ccceeec-----cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-
Confidence 9754 5554 457999999987543 2333332 345788999999999988765 7999999987532
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEcc
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVES 297 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~ 297 (352)
.....+. .|...|.+++|+|++ +|++++.|++|++|+..
T Consensus 355 ----------~~v~~l~-gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 355 ----------AKVAELK-GHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp ----------CEEEEEC-CCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ----------cEEEEEc-CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 2333443 478899999999976 89999999999999653
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.1e-30 Score=247.61 Aligned_cols=223 Identities=27% Similarity=0.484 Sum_probs=181.6
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC--CCEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS--GKLL 89 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l 89 (352)
..+.++.+|.+.|++++|+|+.. +.+|++|+.||+|++|++.++.. .... ....|...|++++|+|+ ++.+
T Consensus 44 ~~~~~l~~h~~~V~~l~~s~~~~----~~~l~s~s~Dg~I~vwd~~~~~~--~~~~-~~~~h~~~V~~v~~sp~~~~~~l 116 (753)
T 3jro_A 44 KLIDTLTGHEGPVWRVDWAHPKF----GTILASCSYDGKVLIWKEENGRW--SQIA-VHAVHSASVNSVQWAPHEYGPLL 116 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCTTS----CSEEEEEETTSCEEEEEEETTEE--EEEE-EECCCSSCEEEEEECCGGGCSEE
T ss_pred ccceeccCCcCceEEEEecCCCC----CCEEEEEeCCCeEEEEECCCCcc--cccc-cccCCCCCeEEEEECCCCCCCEE
Confidence 44567889999999999988631 47999999999999999887531 1111 22458899999999999 9999
Q ss_pred EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECC-------------CCcEEEEeeCCCcEEEEecCCCC-eeEE
Q 018675 90 ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNA-------------SGTLLATCGRDKSVWIWEVMPGN-EFEC 155 (352)
Q Consensus 90 ~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-------------~~~~l~s~~~d~~v~vwd~~~~~-~~~~ 155 (352)
++|+.|+.|++||..++.......+.+|...|.++.|+| ++..|++|+.|++|++||+..+. ...+
T Consensus 117 ~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~ 196 (753)
T 3jro_A 117 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 196 (753)
T ss_dssp EEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEE
T ss_pred EEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccccee
Confidence 999999999999987764444556778999999999999 48899999999999999997654 2345
Q ss_pred EEEeecCccCeeEEEEcCC---CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 156 VSVLQGHAQDVKMVQWHPT---MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 156 ~~~~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
...+.+|...|++++|+|+ +.++++++.|+.|++|++........ . ......+|...|++++|+|++.+++++
T Consensus 197 ~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~---~-~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 197 ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK---K-TLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB---C-CBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcce---e-EEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 6678899999999999999 89999999999999999865421111 0 111234588899999999999999999
Q ss_pred eCCCcEEEEcCCc
Q 018675 233 SDDLTIKIWGADI 245 (352)
Q Consensus 233 ~~dg~i~iwd~~~ 245 (352)
+.||.|++|+++.
T Consensus 273 s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 273 GGDNKVTLWKENL 285 (753)
T ss_dssp CSSSCEECCBCCS
T ss_pred cCCCEEEEEecCC
Confidence 9999999999763
No 111
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=2.4e-28 Score=219.89 Aligned_cols=289 Identities=20% Similarity=0.308 Sum_probs=185.5
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC---CCEEEEEeC
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS---GKLLATASF 94 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~s~~~ 94 (352)
.+|...|++++|+|.+ +.+|++++.|++|++|++.+..... .+ .+...+.++.|+|. +.++++++.
T Consensus 96 ~~~~~~v~~~~~~~~~-----~~~l~s~~~d~~i~iwd~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (408)
T 4a11_B 96 DVHRYSVETVQWYPHD-----TGMFTSSSFDKTLKVWDTNTLQTAD----VF--NFEETVYSHHMSPVSTKHCLVAVGTR 164 (408)
T ss_dssp TCCSSCEEEEEECTTC-----TTCEEEEETTSEEEEEETTTTEEEE----EE--ECSSCEEEEEECSSCSSCCEEEEEES
T ss_pred ccCCCcEEEEEEccCC-----CcEEEEEeCCCeEEEeeCCCCccce----ec--cCCCceeeeEeecCCCCCcEEEEEcC
Confidence 3699999999999954 4689999999999999998764322 11 25678899999885 459999999
Q ss_pred CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEe--------------
Q 018675 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVL-------------- 159 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~-------------- 159 (352)
|+.+++||..++. ....+.+|.+.|.+++|+|++. +|++++.|+.|++||++.... +...+
T Consensus 165 ~~~v~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 165 GPKVQLCDLKSGS--CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASG--CLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp SSSEEEEESSSSC--CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSC--CSEECCTTTTCSCCCTTTS
T ss_pred CCeEEEEeCCCcc--eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCc--ccccccccccccceeeccc
Confidence 9999999987653 4567788999999999999988 599999999999999865431 11222
Q ss_pred -ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcE
Q 018675 160 -QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTI 238 (352)
Q Consensus 160 -~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i 238 (352)
..|...|.+++|+|++.+|++++.|+.|++|++........... .........+........+..++.++.|+.|
T Consensus 241 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 316 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYG----KVCNNSKKGLKFTVSCGCSSEFVFVPYGSTI 316 (408)
T ss_dssp SCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCC----CCCCCCSSCCCCEECCSSSSCEEEEEETTEE
T ss_pred cccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccc----cccccccccceeEEecCCCceEEEEecCCEE
Confidence 46888999999999999999999999999999865432110000 0000111111112223345567777889999
Q ss_pred EEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeeccccc
Q 018675 239 KIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH 317 (352)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h 317 (352)
++||+... .....+. .|...+.+++|++++ ++++++.|+.+++|+........ ....+
T Consensus 317 ~v~d~~~~-----------~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~---------~~~~~ 375 (408)
T 4a11_B 317 AVYTVYSG-----------EQITMLK-GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP---------DDDET 375 (408)
T ss_dssp EEEETTTC-----------CEEEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------------------
T ss_pred EEEECcCC-----------cceeeec-cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC---------CCCce
Confidence 99997532 1222332 467789999999975 89999999999999775432211 11111
Q ss_pred CcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 318 DMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 318 ~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
-....+.|.....+.+.+.|+.+++|+..
T Consensus 376 ---~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 376 ---TTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp --------------------------------
T ss_pred ---EeccccccccceeecccCccCceeecCCc
Confidence 11223344333456788889999999864
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.5e-27 Score=214.59 Aligned_cols=293 Identities=11% Similarity=0.038 Sum_probs=210.8
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
..+..+..+ ..+.+++|+|. +.++++++.|++|++|+..+++............|...|.+++|+|+++++++
T Consensus 114 ~~~~~~~~~-~~~~~~~~s~~------~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s 186 (433)
T 3bws_A 114 RFISRFKTG-FQPKSVRFIDN------TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVS 186 (433)
T ss_dssp EEEEEEECS-SCBCCCEESSS------SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEE
T ss_pred eEEEEEcCC-CCceEEEEeCC------CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEE
Confidence 344445444 44668999994 47888988999999999987654321111111357789999999999999999
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
++.|+.+++||..+++ ....+..|...+.+++|+|+++.++ +++.|+.|++||+..+. .+..+..+ ..+.+++
T Consensus 187 ~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~---~~~~~~~~-~~~~~~~ 260 (433)
T 3bws_A 187 QMQANAVHVFDLKTLA--YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL---EIRKTDKI-GLPRGLL 260 (433)
T ss_dssp EGGGTEEEEEETTTCC--EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE---EEEECCCC-SEEEEEE
T ss_pred ECCCCEEEEEECCCce--EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc---EEEEecCC-CCceEEE
Confidence 9999999999987654 4556667888999999999999875 55589999999987543 34444443 4588999
Q ss_pred EcCCCCEEEEEe--------CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE-EEEEeCCCcEEEE
Q 018675 171 WHPTMDVLFSCS--------YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIW 241 (352)
Q Consensus 171 ~~~~~~~l~s~~--------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~-l~s~~~dg~i~iw 241 (352)
|+|++..+++++ .|+.|++|++... .....+ .|...+.+++|+|++++ +++++.|+.|++|
T Consensus 261 ~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~-----~~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQESGGGRLGIYSMDKE-----KLIDTI-----GPPGNKRHIVSGNTENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp ECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT-----EEEEEE-----EEEECEEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEECCCCccccCCCeEEEEECCCC-----cEEeec-----cCCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 999999998887 4889999987543 122222 34567889999999975 4677899999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCC---------------CCeEEEEEccCCccccCc
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAA---------------DDSVQFFVESKDDLIDGP 305 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~---------------d~~v~~~~~~~~~~~~~~ 305 (352)
|++..+ ....+. +...+..+++++++ ++++++. ||.+++|+.....
T Consensus 331 d~~~~~-----------~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~----- 392 (433)
T 3bws_A 331 DLKEKK-----------VQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT----- 392 (433)
T ss_dssp ETTTTE-----------EEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE-----
T ss_pred ECCCCc-----------EEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc-----
Confidence 975321 111221 34567889999876 4555544 5699999764321
Q ss_pred ccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 306 SYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 306 ~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+..... ...+.+++|+|+++.++++++.|+.|++|++..
T Consensus 393 ----~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 393 ----VKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ----EEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ----EEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 1222222 457999999999986555555699999999863
No 113
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=3.9e-28 Score=213.31 Aligned_cols=228 Identities=20% Similarity=0.366 Sum_probs=174.5
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee-----eeeeeeeecceecceEEEEECCC-
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF-----WNCKAVLEEMHTRTVRSCAWSPS- 85 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~-----~~~~~~~~~~h~~~v~~~~~s~~- 85 (352)
..+.++.+|...|++++|+|... +.+|++++.|++|++|++.++... +.....+ ..|...|.+++|+|+
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d----~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 122 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEY----GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL-NDSKGSLYSVKFAPAH 122 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGG----CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE-CCCSSCEEEEEECCGG
T ss_pred eecceeccCCCcEEEEEEcCCCC----CCEEEEEcCCCeEEEEecCCCcccccccCcceeeee-cccCCceeEEEEcCCC
Confidence 45667789999999999999410 479999999999999998765311 1112222 358899999999999
Q ss_pred -CCEEEEEeCCCcEEEEEccCCceeeeE-----------eeccccCCeeEEEECCC---CcEEEEeeCCCcEEEEecCCC
Q 018675 86 -GKLLATASFDATTCIWEDVGGDYECVA-----------TLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 86 -~~~l~s~~~d~~i~i~~~~~~~~~~~~-----------~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~vwd~~~~ 150 (352)
+++|++++.|+.+++||..++...... ....|...+.++.|+|+ +..|++++.|+.+.+|+...+
T Consensus 123 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 202 (351)
T 3f3f_A 123 LGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG 202 (351)
T ss_dssp GCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS
T ss_pred CCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC
Confidence 999999999999999997654321100 11267889999999997 899999999999977776544
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCC----CEEEEEeCCCcEEEEecCCCCCCCc--------------------------
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTM----DVLFSCSYDNTIKVWWAEDTDSDNW-------------------------- 200 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~~~d~~i~iw~~~~~~~~~~-------------------------- 200 (352)
....+..+.+|...|.+++|+|++ .+|++++.|+.|++|++........
T Consensus 203 -~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (351)
T 3f3f_A 203 -KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSD 281 (351)
T ss_dssp -CEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------
T ss_pred -ceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccc
Confidence 344567788899999999999998 7999999999999998765211000
Q ss_pred -----------eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 201 -----------HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 201 -----------~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
...........+|...|.+++|+|++++|++++.||.|++|+++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 282 SNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ---------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 000011122347899999999999999999999999999998753
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.2e-27 Score=212.12 Aligned_cols=247 Identities=17% Similarity=0.298 Sum_probs=180.8
Q ss_pred cceecceEEEEECCC---CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEec
Q 018675 71 EMHTRTVRSCAWSPS---GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEV 147 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~---~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~ 147 (352)
..|...|++++|+|+ |++|++|+.|+.|++|+..+........+.+|.+.|++++|+|++++|++++.|++|++||+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 458999999999999 69999999999999999876343444677889999999999999999999999999999998
Q ss_pred CCCCeeEEEEEeecCccCeeEEEE--cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 148 MPGNEFECVSVLQGHAQDVKMVQW--HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 148 ~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
..+. .+ ....|...|.++.| +|++.++++++.|+.|++|++.... ....+. .+ ..+.++.+.
T Consensus 116 ~~~~---~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~----~~-~~~~~~~~~-- 179 (368)
T 3mmy_A 116 SSNQ---AI-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN-----PMMVLQ----LP-ERCYCADVI-- 179 (368)
T ss_dssp TTTE---EE-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS-----CSEEEE----CS-SCEEEEEEE--
T ss_pred CCCC---ce-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc-----EEEEEe----cC-CCceEEEec--
Confidence 7553 22 25568999999999 8899999999999999999876532 122222 12 356666665
Q ss_pred CCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEE--EecCC---ceEEecCCCCeEEEEEccCCc
Q 018675 226 GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV--HWSRE---GIIASGAADDSVQFFVESKDD 300 (352)
Q Consensus 226 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~---~~~~s~~~d~~v~~~~~~~~~ 300 (352)
...+++++.++.+++|+++..... ..............+ ..... ..+++++.|+.+++|+.....
T Consensus 180 ~~~~~~~~~~~~i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 180 YPMAVVATAERGLIVYQLENQPSE----------FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp TTEEEEEEGGGCEEEEECSSSCEE----------EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred CCeeEEEeCCCcEEEEEeccccch----------hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 457889999999999998632110 011111111222222 22221 238999999999999775431
Q ss_pred cccCcccceeeecccccC------------cceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 301 LIDGPSYKMLLKKEKAHD------------MDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 301 ~~~~~~~~~~~~~~~~h~------------~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
. ........+|. ..|++++|+|+++ +|++++.||.|+|||+..
T Consensus 250 ~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 250 P------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp H------HHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTT
T ss_pred c------cccceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCC
Confidence 1 01112233443 3799999999986 688999999999999875
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.4e-27 Score=214.73 Aligned_cols=255 Identities=12% Similarity=0.024 Sum_probs=189.6
Q ss_pred eecCCccceEEEEEccCCCCCCCccEE-EEeeCCCeEEEEecC--CCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVF-ASCSGDKTVRIWEQS--ASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l-~s~s~D~~v~~w~~~--~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
.+.+|.+.|++++|+|+ +++| ++++.|++|++|++. ++....... ...|...|.+++|+|++++|++|
T Consensus 97 ~~~~~~~~v~~~~~s~d------~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~---~~~~~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSD------ESRLIACADSDKSLLVFDVDKTSKNVLKLRK---RFCFSKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp ---CCCCCEEEEEECTT------SSEEEEEEGGGTEEEEEEECSSSSSCEEEEE---EEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCccCCceEEEEEcCC------CCEEEEEECCCCeEEEEECcCCCCceeeeee---cccCCCCceEEEEcCCCCEEEEE
Confidence 34578889999999997 4564 999999999999987 544322111 12366889999999999999999
Q ss_pred eCCCcEEEEEccCCcee--eeEeeccccCCeeEEEECCC---CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 93 SFDATTCIWEDVGGDYE--CVATLEGHENEVKSVSWNAS---GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 93 ~~d~~i~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
+.|+.+.+|+..++... +...+.+|...|++++|+|+ +.+|++++.|++|++||+..+... ...+.+|...|.
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~--~~~~~~h~~~v~ 245 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV--DKWLFGHKHFVS 245 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE--EEECCCCSSCEE
T ss_pred eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee--eeeecCCCCceE
Confidence 99999999997665422 23356789999999999999 999999999999999999765432 122568999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc---------------------CCCCcccEEEEEEcCCC
Q 018675 168 MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES---------------------NNGHSSTIWALSFNAKG 226 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~---------------------~~~h~~~i~~l~~~~~~ 226 (352)
+++|+ ++.+|++++.|+.|++|++.... +...+... .......|.++.|+|++
T Consensus 246 ~~~~s-d~~~l~s~~~d~~v~vwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 246 SICCG-KDYLLLSAGGDDKIFAWDWKTGK-----NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp EEEEC-STTEEEEEESSSEEEEEETTTCC-----EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred EEEEC-CCCEEEEEeCCCeEEEEECCCCc-----EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 99999 99999999999999999876532 22222100 00234579999999999
Q ss_pred CEEEEEe-CCCcEEEEcC--CccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCC-------CCeEEEEEc
Q 018675 227 DKLVSCS-DDLTIKIWGA--DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAA-------DDSVQFFVE 296 (352)
Q Consensus 227 ~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~-------d~~v~~~~~ 296 (352)
++|++++ .|+.|++|++ ... ..+.....+.. + ..+.+++|++++.+++.+. +..+.+|..
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~--------~~l~~~~~~~~-~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQK--------GDLALKQIITF-P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSST--------TCEEEEEEEEC-S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred CEEEEEECCCCeEEEEEeccCCC--------CceeeccEecc-C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEE
Confidence 9999998 8999999987 211 11122233332 3 6789999999877666543 455788865
Q ss_pred c
Q 018675 297 S 297 (352)
Q Consensus 297 ~ 297 (352)
.
T Consensus 390 ~ 390 (450)
T 2vdu_B 390 N 390 (450)
T ss_dssp E
T ss_pred E
Confidence 3
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=7.5e-27 Score=212.82 Aligned_cols=250 Identities=24% Similarity=0.407 Sum_probs=192.4
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
+.+.++.+|.+.|++++|. +.++++|+.||+|++|++.++..... + ..|...|.+++|++ ..+++
T Consensus 164 ~~~~~~~~h~~~v~~l~~~--------~~~l~sg~~dg~i~vwd~~~~~~~~~----~-~~h~~~v~~l~~~~--~~l~s 228 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQYD--------ERVIITGSSDSTVRVWDVNTGEMLNT----L-IHHCEAVLHLRFNN--GMMVT 228 (435)
T ss_dssp CEEEEECCCSSCEEEEECC--------SSEEEEEETTSCEEEEESSSCCEEEE----E-CCCCSCEEEEECCT--TEEEE
T ss_pred eEEEEEcCCCCcEEEEEEC--------CCEEEEEcCCCeEEEEECCCCcEEEE----E-cCCCCcEEEEEEcC--CEEEE
Confidence 3456788999999999983 36899999999999999987754322 2 35888999999974 59999
Q ss_pred EeCCCcEEEEEccCCce-eeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 92 ASFDATTCIWEDVGGDY-ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
|+.|+.|++||..++.. .....+.+|...|.++.| +++++++|+.|++|++||+..+. ++..+.+|...+.++.
T Consensus 229 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~ 303 (435)
T 1p22_A 229 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE---FVRTLNGHKRGIACLQ 303 (435)
T ss_dssp EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEE
T ss_pred eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc---EEEEEcCCCCcEEEEE
Confidence 99999999999876542 223567789999999999 67899999999999999997654 4566788999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcccccc
Q 018675 171 WHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQS 250 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (352)
++ +..+++|+.|+.|++|++... .+...+ .+|...|.+++| ++.+|++|+.||.|++||++......
T Consensus 304 ~~--~~~l~~g~~dg~i~iwd~~~~-----~~~~~~----~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~ 370 (435)
T 1p22_A 304 YR--DRLVVSGSSDNTIRLWDIECG-----ACLRVL----EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPR 370 (435)
T ss_dssp EE--TTEEEEEETTSCEEEEETTTC-----CEEEEE----CCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTT
T ss_pred eC--CCEEEEEeCCCeEEEEECCCC-----CEEEEE----eCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 84 578999999999999987643 233333 368899999998 68899999999999999975322110
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccC
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESK 298 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~ 298 (352)
.. ........+ ..|...+.++.+ .+.++++++.|+.+++|+...
T Consensus 371 ~~--~~~~~~~~~-~~h~~~v~~l~~-~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 371 AP--AGTLCLRTL-VEHSGRVFRLQF-DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp SC--TTTTEEEEE-CCCSSCCCCEEE-CSSCEEECCSSSEEEEEC---
T ss_pred cc--ccchheeec-cCCCCCeEEEEe-CCCEEEEEeCCCEEEEEECCC
Confidence 00 000112222 346778888988 456899999999999996543
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1.1e-26 Score=202.19 Aligned_cols=245 Identities=23% Similarity=0.407 Sum_probs=189.3
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
.+.+|...|++++|+|+ +++|+||+.|++|++|+..+++.... . ..|...+.++ ++++..+++++.+
T Consensus 62 ~~~~~~~~V~~v~~~~~------~~~l~sgs~Dg~v~iw~~~~~~~~~~----~-~~h~~~~~~~--~~~~~~l~s~~~~ 128 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKE------GNYLAVGTSSAEVQLWDVQQQKRLRN----M-TSHSARVGSL--SWNSYILSSGSRS 128 (318)
T ss_dssp ECCSTTCCEEEEEECTT------SSEEEEEETTSEEEEEETTTTEEEEE----E-ECCSSCEEEE--EEETTEEEEEETT
T ss_pred EecCCCCeEEEEEECCC------CCEEEEEECCCcEEEeecCCceeEEE----e-cCccceEEEe--ecCCCEEEEEecC
Confidence 45678999999999997 57999999999999999988754322 1 3466666654 5567899999999
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe-eEEEEEeecCccCeeEEEEcCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE-FECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
+.+.+|+..... ..+..+.+|...+.++.+++++++|++++.|++|++||+..++. .........|...+.++.++|.
T Consensus 129 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 207 (318)
T 4ggc_A 129 GHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW 207 (318)
T ss_dssp SEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTT
T ss_pred CceEeeecCCCc-eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCC
Confidence 999999876543 45667789999999999999999999999999999999875432 1223445567778999999987
Q ss_pred CCE---EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe--CCCcEEEEcCCccccc
Q 018675 175 MDV---LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS--DDLTIKIWGADITRMQ 249 (352)
Q Consensus 175 ~~~---l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~ 249 (352)
+.. +++++.++.|++|+..... ..... .+...+..+.|+|++..+++++ .|+.|++||++..
T Consensus 208 ~~~~~~~~~~~~~~~i~lwd~~~~~-----~~~~~-----~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~--- 274 (318)
T 4ggc_A 208 QSNVLATGGGTSDRHIRIWNVCSGA-----CLSAV-----DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM--- 274 (318)
T ss_dssp STTEEEEEECTTTCEEEEEETTTCC-----EEEEE-----ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC---
T ss_pred CCcEEEEEecCCCCEEEEEeccccc-----ccccc-----cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC---
Confidence 653 3466788999999865432 11111 3556799999999999887654 7999999997532
Q ss_pred cCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 250 SGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
+.+..+. .|...|.+++|+|++ +|++++.|++|++|+.
T Consensus 275 --------~~~~~l~-gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 275 --------AKVAELK-GHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp --------CEEEEEC-CCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred --------cEEEEEc-CCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 2233343 478899999999976 8999999999999954
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=5e-26 Score=204.12 Aligned_cols=265 Identities=11% Similarity=0.152 Sum_probs=192.9
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEE-EEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
.++++++.|++|++|+..+++... .+ . +...+.+++|+|+|+.+ ++++.|+.|++||..+++ ....+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~----~~-~-~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~--~~~~~~~~- 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTA----TI-P-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN--VIATVPAG- 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE----EE-E-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE--EEEEEECS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEE----Ee-e-cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCe--EEEEEECC-
Confidence 478899999999999998764322 12 1 23468999999999976 677789999999987764 34455444
Q ss_pred CCeeEEEECCCCcEEE-EeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEE-EEEeCCCcEEEEecCCCC
Q 018675 119 NEVKSVSWNASGTLLA-TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL-FSCSYDNTIKVWWAEDTD 196 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~iw~~~~~~ 196 (352)
..+.+++|+|++++|+ +++.|++|++||+..++ .+..+..+ ..+.+++|+|+++.+ ++++.++.|++|++...
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~---~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~- 148 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT---VAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK- 148 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCe---EEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-
Confidence 4899999999999775 55567999999987553 33444433 468999999999977 68888999999987542
Q ss_pred CCCceeEeeeeccCCCCcccEEEEEEcCCCCEE-EEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEE
Q 018675 197 SDNWHCVQTISESNNGHSSTIWALSFNAKGDKL-VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVH 275 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 275 (352)
.....+. ....+.+++|+|+++++ ++++.|+.|++||++..+. ...+. +...+..+.
T Consensus 149 ----~~~~~~~-----~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-----------~~~~~--~~~~~~~~~ 206 (391)
T 1l0q_A 149 ----AVINTVS-----VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV-----------IDTVK--VEAAPSGIA 206 (391)
T ss_dssp ----EEEEEEE-----CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-----------EEEEE--CSSEEEEEE
T ss_pred ----cEEEEEe-----cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE-----------EEEEe--cCCCccceE
Confidence 2233332 12457899999999887 6778899999999753221 11111 344678889
Q ss_pred ecCCc-eEEecC---CCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 276 WSREG-IIASGA---ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 276 ~~~~~-~~~s~~---~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
+++++ .+++++ .++.+++|+..... .+.....|. .+.+++|+|+++.++++++.|+.|++||+..
T Consensus 207 ~~~~g~~l~~~~~~~~~~~v~~~d~~~~~---------~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 207 VNPEGTKAYVTNVDKYFNTVSMIDTGTNK---------ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEETTTTE---------EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ECCCCCEEEEEecCcCCCcEEEEECCCCe---------EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 99876 566555 68999999764321 122233343 5889999999987778999999999999864
No 119
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.4e-27 Score=217.46 Aligned_cols=227 Identities=24% Similarity=0.435 Sum_probs=177.1
Q ss_pred eeeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce---eeeeeeeeecceecceEEEEECC-CC
Q 018675 11 LREIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR---FWNCKAVLEEMHTRTVRSCAWSP-SG 86 (352)
Q Consensus 11 ~~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~-~~ 86 (352)
...+.++.+|...|++++|+|.. ..+|++|+.||+|++|++..... ...... ....|...|.+++|+| ++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~-----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~ 244 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNL-----NGYLLSASDDHTICLWDINATPKEHRVIDAKN-IFTGHTAVVEDVAWHLLHE 244 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTS-----TTEEEEECTTSCEEEEETTSCCBGGGEEECSE-EECCCSSCEEEEEECSSCT
T ss_pred CCCcEEecCCCCCeEEEEeCCCC-----CCeEEEEeCCCeEEEEeCCCCCCCCceeccce-eecCCCCCEeeeEEeCCCC
Confidence 35567788999999999999973 23899999999999999976321 111111 2235888999999999 67
Q ss_pred CEEEEEeCCCcEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 87 KLLATASFDATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 87 ~~l~s~~~d~~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
.++++++.|+.|++||..... ......+..|...|++++|+|++. +|++|+.|++|++||++... .++..+.+|..
T Consensus 245 ~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~--~~~~~~~~h~~ 322 (430)
T 2xyi_A 245 SLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKD 322 (430)
T ss_dssp TEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEECCSS
T ss_pred CEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC--CCeEEeecCCC
Confidence 899999999999999987642 234556678999999999999887 78999999999999997633 23566778999
Q ss_pred CeeEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCce-----eEeeeeccCCCCcccEEEEEEcCCCC-EEEEEeCCCc
Q 018675 165 DVKMVQWHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWH-----CVQTISESNNGHSSTIWALSFNAKGD-KLVSCSDDLT 237 (352)
Q Consensus 165 ~v~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~-----~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~~dg~ 237 (352)
.|.+++|+|++. ++++++.|+.|++|++......... ....+.....+|...|.+++|+|++. +|++++.||.
T Consensus 323 ~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~ 402 (430)
T 2xyi_A 323 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI 402 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCC
Confidence 999999999985 7899999999999998652211000 00011123347889999999999999 8999999999
Q ss_pred EEEEcCCc
Q 018675 238 IKIWGADI 245 (352)
Q Consensus 238 i~iwd~~~ 245 (352)
|++|++..
T Consensus 403 i~iw~~~~ 410 (430)
T 2xyi_A 403 MQVWQMAE 410 (430)
T ss_dssp EEEEEECH
T ss_pred EEEeEccc
Confidence 99998753
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.6e-25 Score=192.15 Aligned_cols=304 Identities=12% Similarity=0.127 Sum_probs=181.7
Q ss_pred eeeeeeecCCc----cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC
Q 018675 11 LREIQTLEGHT----DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG 86 (352)
Q Consensus 11 ~~~~~~~~gH~----~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 86 (352)
+.++.+|+.-. -.|.++-|-.... ..+.+++++ ..+|++|+..+. ..|...+.. .+|+.+|..+.+.||-
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~v~lw~~~~~-~~~~~~~~~-~~~~~~v~~~~~~~~~ 98 (356)
T 2w18_A 25 LQLVSELKNPSGSCSVDVSAMFWERAGC---KEPCIITAC-EDVVSLWKALDA-WQWEKLYTW-HFAEVPVLQIVPVPDV 98 (356)
T ss_dssp EEEEEEECCCCSSCEEEEEEEEEC-------CEEEEEEEE-SSEEEEEEESSS-SBEEEEEEE-ECCSSCEEEECCCTTC
T ss_pred eeeeehhcCCCCCeEEEEeeeeeccCCC---CccEEEEec-cceEEEcccCCC-ccceeeEEE-eccCceeEEEEEcCcc
Confidence 35555555333 3555666644321 234566665 579999998876 234444433 4577788888888865
Q ss_pred CEEEEEe-CCCcEE-EEEcc---C-CceeeeEeeccccCCeeEEEECCCCcEEEEee--CCCcEEEEecCCCCeeEEEEE
Q 018675 87 KLLATAS-FDATTC-IWEDV---G-GDYECVATLEGHENEVKSVSWNASGTLLATCG--RDKSVWIWEVMPGNEFECVSV 158 (352)
Q Consensus 87 ~~l~s~~-~d~~i~-i~~~~---~-~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~ 158 (352)
.-|+... .+=.+. ++-.. . ..........+|...|..+ ++++++.+++ .|++|++|++.+.. +.+..
T Consensus 99 ~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG--~~~~s 173 (356)
T 2w18_A 99 YNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDG--GGKEN 173 (356)
T ss_dssp CSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTS--CEEEE
T ss_pred cceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCC--ceeee
Confidence 4333222 111111 11110 0 0011122223455455554 5666666643 59999999985533 23456
Q ss_pred eecCccCeeEEEEcC---CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE------
Q 018675 159 LQGHAQDVKMVQWHP---TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL------ 229 (352)
Q Consensus 159 ~~~h~~~v~~~~~~~---~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l------ 229 (352)
+.+|...+..++|+| ++..|++++.|++|+|||+... ++++++.. ...+...+.+++|+|+|.++
T Consensus 174 ~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG-----k~l~tL~g-~~~~v~~v~~vafSpdG~~lvs~s~~ 247 (356)
T 2w18_A 174 QFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG-----QLLKKMHI-DDSYQASVCHKAYSEMGLLFIVLSHP 247 (356)
T ss_dssp EEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC-----CEEEEEEC-CC---CCCEEEEEEETTEEEEEEC--
T ss_pred eccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC-----cEEEEEcC-CCcceeeeEEEEECCCCCEEEEeccC
Confidence 678898999999999 6789999999999999987643 34455531 11123467888999999876
Q ss_pred ------EEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCcccc
Q 018675 230 ------VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLID 303 (352)
Q Consensus 230 ------~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~ 303 (352)
++|+.|++|++||.+..+... .....+...|.....+.+++ +..+++++.|++|++|+....
T Consensus 248 ~~~w~laSGs~D~tIklWd~~tgk~l~-------v~~~~~p~Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tG---- 315 (356)
T 2w18_A 248 CAKESESLRSPVFQLIVINPKTTLSVG-------VMLYCLPPGQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLG---- 315 (356)
T ss_dssp ----------CCEEEEEEETTTTEEEE-------EEEECCCTTCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTC----
T ss_pred CCcceeeccCCCcEEEEEECCCCEEEE-------EEEeeccCCCcceeEccccC-CCEEEEEcCCCcEEEEECCCC----
Confidence 668899999999875332110 00000011222233333433 447899999999999976542
Q ss_pred CcccceeeecccccCccee-EEEecCCCcceEEEecCCCeEEEEeec
Q 018675 304 GPSYKMLLKKEKAHDMDVN-SVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 304 ~~~~~~~~~~~~~h~~~i~-~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+++.++.+|...+. .++||||++ +|+||+.|++|||||+.
T Consensus 316 -----k~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 316 -----QCTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp -----SEEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEEC
T ss_pred -----cEEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecCC
Confidence 23445667877665 589999986 68899999999999963
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-27 Score=208.19 Aligned_cols=237 Identities=9% Similarity=0.033 Sum_probs=167.7
Q ss_pred EECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC------eeE
Q 018675 81 AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN------EFE 154 (352)
Q Consensus 81 ~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~------~~~ 154 (352)
.+.+++.++++|+.|++|++||..+++. +..+. ...|.++.|+|+ +++++.|++|++|+..... ...
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~--~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKT--ITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSC--EEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcE--EEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 3456788999999999999999877643 33333 467888888887 9999999999999764210 111
Q ss_pred EEEEe-ecCccCeeEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 155 CVSVL-QGHAQDVKMVQWHP--TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 155 ~~~~~-~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
.+... .+|...|.+++|+| ++.++++++.|+.|++|++.... +.... ...|...|.+++|+|++.+|++
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-----~~~~~---~~~~~~~i~~~~~~pdg~~las 187 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-----QYIVH---SAKSDVEYSSGVLHKDSLLLAL 187 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-----EEEEE---CCCSSCCCCEEEECTTSCEEEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-----EEEEE---ecCCCCceEEEEECCCCCEEEE
Confidence 12222 35667899999999 99999999999999999876532 12111 1235567999999999999999
Q ss_pred EeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCccccee
Q 018675 232 CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKML 310 (352)
Q Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~ 310 (352)
|+.||.|++||++..... ...+...|...+.++.|++++ ++++++ ++.+++|+........ .
T Consensus 188 g~~dg~i~iwd~~~~~~~----------~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~-----~- 250 (343)
T 3lrv_A 188 YSPDGILDVYNLSSPDQA----------SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL-----A- 250 (343)
T ss_dssp ECTTSCEEEEESSCTTSC----------CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB-----S-
T ss_pred EcCCCEEEEEECCCCCCC----------ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce-----e-
Confidence 999999999998643211 022233367889999999987 677777 5599999875432211 0
Q ss_pred eecccccCccee--EEEecCCCcceEEEecC-CCeEEEEeecc
Q 018675 311 LKKEKAHDMDVN--SVQWSPGERRLLASASD-DGMIKIWELAN 350 (352)
Q Consensus 311 ~~~~~~h~~~i~--~~~~sp~~~~~l~s~~~-Dg~i~iw~~~~ 350 (352)
+.....|...+. +++|+|+++ +|++++. |+.|+||++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 251 YPTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp SCCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEECT
T ss_pred ecccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEcc
Confidence 111222444444 699999987 5777777 99999999854
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=1.2e-26 Score=208.75 Aligned_cols=210 Identities=14% Similarity=0.157 Sum_probs=144.4
Q ss_pred eeeecCCccceEEEEEccCCCC--CCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGV--DGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLA 90 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~--~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~ 90 (352)
+..+.||.+.|++++|+|.... ...+++|||||.|++|||||+.+...... ...|..+|.+++|+|++ .+|+
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~-----~~~~~~~v~~v~~~p~~~~~l~ 203 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA-----GYPLSSPGISVQFRPSNPNQLI 203 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE-----EEECSSCEEEEEEETTEEEEEE
T ss_pred ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee-----ecCCCCCcEEEEECCCCCceEE
Confidence 3457899999999999983211 11257999999999999999876543221 13477899999999987 4799
Q ss_pred EEeCCCcEEEEEccCCceee-----------------------eEeeccccCCeeEEEEC-CCCcEEEEeeCCCcEEEEe
Q 018675 91 TASFDATTCIWEDVGGDYEC-----------------------VATLEGHENEVKSVSWN-ASGTLLATCGRDKSVWIWE 146 (352)
Q Consensus 91 s~~~d~~i~i~~~~~~~~~~-----------------------~~~~~~h~~~v~~v~~~-~~~~~l~s~~~d~~v~vwd 146 (352)
+|+.|++|++||..++.... .....+|...|.++.|+ +++..|++++.|+++++||
T Consensus 204 ~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 204 VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 99999999999976543210 11234678889999986 7999999999999999999
Q ss_pred cCCCCeeEEEEEeecCccC------------------eeEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCceeEeee
Q 018675 147 VMPGNEFECVSVLQGHAQD------------------VKMVQWHP--TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 206 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~~~------------------v~~~~~~~--~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 206 (352)
+..++... .+..|... .....++| ++.++++|+.|+.|++|+...... ...+
T Consensus 284 ~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~-----~~~~ 355 (393)
T 4gq1_A 284 LFANNDYN---EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS-----NSIP 355 (393)
T ss_dssp C----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC-----CEEE
T ss_pred CccCCCCc---eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE-----EEEe
Confidence 86543221 11122211 12233444 233567788999999998765432 1112
Q ss_pred eccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 207 SESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 207 ~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
.+|..+|.+|+|+|+|++||+++.+| +.+|
T Consensus 356 ----~~~~~~V~svafspdG~~LA~as~~G-v~lv 385 (393)
T 4gq1_A 356 ----IQLGMPIVDFCWHQDGSHLAIATEGS-VLLT 385 (393)
T ss_dssp ----EECSSCEEEEEECTTSSEEEEEESSE-EEEE
T ss_pred ----cCCCCcEEEEEEcCCCCEEEEEeCCC-eEEE
Confidence 24778999999999999999999877 4445
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.1e-25 Score=193.08 Aligned_cols=179 Identities=11% Similarity=0.108 Sum_probs=126.6
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECC---CCCEEEEEeCCCcEEEEEccCCceeeeEeecccc---CCe
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP---SGKLLATASFDATTCIWEDVGGDYECVATLEGHE---NEV 121 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~---~~v 121 (352)
|++|++|++....+... . ...|...++.++|+| ++.+|++|+.|++|+|||..+++ ++.++.+|. ..+
T Consensus 156 d~~V~~~~~s~dG~~~~---s-~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--~l~tL~g~~~~v~~v 229 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKE---N-QFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--LLKKMHIDDSYQASV 229 (356)
T ss_dssp TCEEEEEEECTTSCEEE---E-EEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--EEEEEECCC---CCC
T ss_pred CCcEEEEEECCCCceee---e-eccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--EEEEEcCCCcceeee
Confidence 88888888854332111 1 124777888899998 77999999999999999998874 466676554 357
Q ss_pred eEEEECCCCcEE------------EEeeCCCcEEEEecCCCCeeEEEEE--eecCccCeeEEEEcCCCCEEEEEeCCCcE
Q 018675 122 KSVSWNASGTLL------------ATCGRDKSVWIWEVMPGNEFECVSV--LQGHAQDVKMVQWHPTMDVLFSCSYDNTI 187 (352)
Q Consensus 122 ~~v~~~~~~~~l------------~s~~~d~~v~vwd~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 187 (352)
.+++|+|+|.++ ++|+.|++|++||...+........ ..+|...+.+..+ ++..+++++.|++|
T Consensus 230 ~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTI 307 (356)
T 2w18_A 230 CHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTI 307 (356)
T ss_dssp EEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCE
T ss_pred EEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcE
Confidence 778999999876 5688999999999876543221110 1356554443333 37789999999999
Q ss_pred EEEecCCCCCCCceeEeeeeccCCCCcccEE-EEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIW-ALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 188 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~-~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
+|||+... ++.+++. +|...+. +++|+|+|++|++|+.|++|||||.
T Consensus 308 kIWDl~tG-----k~l~tL~----gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 308 AIWDLLLG-----QCTALLP----PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEETTTC-----SEEEEEC----CC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCC-----cEEEEec----CCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99987653 3444443 5766555 5899999999999999999999974
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=2.7e-24 Score=190.68 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=166.3
Q ss_pred cceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEE-EEeeCCCcEEEEecCC
Q 018675 71 EMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVMP 149 (352)
Q Consensus 71 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~v~vwd~~~ 149 (352)
..|...|++++|+|||++|++|+.++ +++|+..+.. ..... +...+..+.+.++++.+ ++++.|++|++||+..
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA--HIMSQ--EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE--EEEEE--ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc--eeeee--ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 45889999999999999999988664 7899976543 22222 22357888998888776 5778889999999876
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
+. ++..+. +...|.++.++++. ++++ .|+.|++|++..... .+..+.. +...+++++ .++
T Consensus 91 ~~---~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~----~~~~~~~-------~~~~~~~s~--~~l 150 (355)
T 3vu4_A 91 KQ---DVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWK----RITDDIR-------FGGVCEFSN--GLL 150 (355)
T ss_dssp TE---EEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCC----BSSCCEE-------EEEEEEEET--TEE
T ss_pred Cc---EEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCce----eeEEecc-------CCceEEEEc--cEE
Confidence 54 334444 56689999998863 3443 488999998765411 1112211 233456666 556
Q ss_pred EE--EeCCCcEEEEcCCccccccC--CC--Ccccee-eEEeecccCcceEEEEecCCc-eEEecCCCCe-EEEEEccCCc
Q 018675 230 VS--CSDDLTIKIWGADITRMQSG--DG--YASWRH-LCTISGYHDRTIFSVHWSREG-IIASGAADDS-VQFFVESKDD 300 (352)
Q Consensus 230 ~s--~~~dg~i~iwd~~~~~~~~~--~~--~~~~~~-~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~-v~~~~~~~~~ 300 (352)
+. |+.||.|++||++....... .. .....+ ...+ ..|...+.+++|++++ ++++++.|++ +++|+.....
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 65 68999999999864321000 00 000011 2222 3578899999999986 7999999998 9999765321
Q ss_pred cccCcccceeeeccc-c-cCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 301 LIDGPSYKMLLKKEK-A-HDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 301 ~~~~~~~~~~~~~~~-~-h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+.... + |...|++++|+|+++ +|++++.|++|+||++..
T Consensus 230 ---------~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 230 ---------LVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp ---------EEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSC
T ss_pred ---------EEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccC
Confidence 222333 4 899999999999986 688999999999999864
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=8.5e-23 Score=183.06 Aligned_cols=244 Identities=12% Similarity=0.121 Sum_probs=178.2
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccE-EEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPV-FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~-l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+.+..+.+|. .+.+++|+|+. .. +++++.|++|++|+..+++... .+. +...+.+++|+|+++.|+
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg------~~l~~~~~~d~~i~v~d~~~~~~~~----~~~--~~~~v~~~~~spdg~~l~ 89 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDG------TKVYVANAHSNDVSIIDTATNNVIA----TVP--AGSSPQGVAVSPDGKQVY 89 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTS------SEEEEEEGGGTEEEEEETTTTEEEE----EEE--CSSSEEEEEECTTSSEEE
T ss_pred eEEEEeecCC-CcceEEECCCC------CEEEEECCCCCeEEEEECCCCeEEE----EEE--CCCCccceEECCCCCEEE
Confidence 3445666665 58999999973 44 5788899999999998764322 121 234899999999999875
Q ss_pred E-EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEE-EEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE
Q 018675 91 T-ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM 168 (352)
Q Consensus 91 s-~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~ 168 (352)
. ++.++.|.+||..+++. ...+. +...+.+++|+|+++.+ ++++.|+.|++||+..++ .+..+..+ ..+..
T Consensus 90 ~~~~~~~~v~v~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~-~~~~~ 162 (391)
T 1l0q_A 90 VTNMASSTLSVIDTTSNTV--AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA---VINTVSVG-RSPKG 162 (391)
T ss_dssp EEETTTTEEEEEETTTTEE--EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEECC-SSEEE
T ss_pred EEECCCCEEEEEECCCCeE--EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc---EEEEEecC-CCcce
Confidence 4 55679999999877643 34444 34578999999999976 788889999999986553 34444444 45789
Q ss_pred EEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe---CCCcEEEEcCC
Q 018675 169 VQWHPTMDVL-FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS---DDLTIKIWGAD 244 (352)
Q Consensus 169 ~~~~~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~---~dg~i~iwd~~ 244 (352)
+.|+|+++.+ ++++.++.|++|++... .....+ .+...+.+++|+|++++|++++ .++.|++||++
T Consensus 163 ~~~~~dg~~l~~~~~~~~~v~~~d~~~~-----~~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 163 IAVTPDGTKVYVANFDSMSISVIDTVTN-----SVIDTV-----KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTT-----EEEEEE-----ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCC-----eEEEEE-----ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 9999999877 57778899999987543 223333 2446789999999999998887 68999999975
Q ss_pred ccccccCCCCccceeeEEeecccCcceEEEEecCCc-eE-EecCCCCeEEEEEccC
Q 018675 245 ITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-II-ASGAADDSVQFFVESK 298 (352)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-~s~~~d~~v~~~~~~~ 298 (352)
..+ ....+.. ...+..+.+++++ .+ ++++.|+.+++|+...
T Consensus 233 ~~~-----------~~~~~~~--~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 233 TNK-----------ITARIPV--GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp TTE-----------EEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCe-----------EEEEEec--CCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 321 1222222 2346788999876 44 6778899999998754
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=1.1e-23 Score=191.41 Aligned_cols=240 Identities=12% Similarity=0.110 Sum_probs=177.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeE---eeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVA---TLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~---~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
..+.+++|+|+++++++++.|+.|.+||..+++..... .+.+|.+.|.+++|++++.++++++.|++|++||+..+.
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 45678999998888888888999999998776543211 345788899999999999999999999999999987554
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEE-EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFS-CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
.+..+..|...+.+++|+|++..+++ ++.|+.|++|++... .....+. +...+.+++|+|++++++
T Consensus 203 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~-----~~~~~~~-----~~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 203 ---YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK-----LEIRKTD-----KIGLPRGLLLSKDGKELY 269 (433)
T ss_dssp ---EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT-----EEEEECC-----CCSEEEEEEECTTSSEEE
T ss_pred ---EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC-----cEEEEec-----CCCCceEEEEcCCCCEEE
Confidence 34556678889999999999998754 457999999987542 2222221 234589999999999999
Q ss_pred EEe--------CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCc
Q 018675 231 SCS--------DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDD 300 (352)
Q Consensus 231 s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~ 300 (352)
+++ .||.|++||++..+. ...+ .+...+..+.+++++ .+++++.++.+++|+.....
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~~~~-----------~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDKEKL-----------IDTI--GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTTTEE-----------EEEE--EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred EEECCCCccccCCCeEEEEECCCCcE-----------Eeec--cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 888 588999999753221 1111 123357788899876 56777899999999765321
Q ss_pred cccCcccceeeecccccCcceeEEEecCCCcceEEEecC--------------CCeEEEEeecc
Q 018675 301 LIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD--------------DGMIKIWELAN 350 (352)
Q Consensus 301 ~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~--------------Dg~i~iw~~~~ 350 (352)
.... ..+...+.+++|+|+++.+++++.. ||.|++||+..
T Consensus 337 ---------~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 337 ---------VQKS-IPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp ---------EEEE-EECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred ---------EEEE-ecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 1122 2356779999999998755443332 67999999864
No 127
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.6e-22 Score=177.57 Aligned_cols=289 Identities=12% Similarity=0.161 Sum_probs=187.5
Q ss_pred EEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC-CcEEEEEcc--CCceeeeEeeccc
Q 018675 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD-ATTCIWEDV--GGDYECVATLEGH 117 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-~~i~i~~~~--~~~~~~~~~~~~h 117 (352)
++++++.|+.|++|++...... ..... ..+...+.+++|+|+|++|++++.+ +.+.+|+.. +++...+..+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGAL-TLTQV--VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCE-EEEEE--EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCCcE-EEeee--EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 4555588999999998542211 11111 2355678899999999998888886 899999986 5555555555443
Q ss_pred cCCeeEEEECCCCcEEEEeeC-CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCC
Q 018675 118 ENEVKSVSWNASGTLLATCGR-DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDT 195 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~ 195 (352)
. .+..++|+|++++|++++. ++.|.+||+..+........+..+ ..+.+++|+|+++.+++++ .++.|.+|++...
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 3 7899999999998766654 889999998533333344444433 4588899999999888777 8999999987541
Q ss_pred CCCCceeEe--eeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCCccccccCCCCccceeeEEeecc--cCcc
Q 018675 196 DSDNWHCVQ--TISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLCTISGY--HDRT 270 (352)
Q Consensus 196 ~~~~~~~~~--~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 270 (352)
. ...... ... ......+..++|+|++++++.+ ..++.|++|+++...- ..........+... ....
T Consensus 162 ~--~~~~~~~~~~~---~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 162 G--HLVAQDPAEVT---TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG----NIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp S--CEEEEEEEEEE---CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS----CCEEEEEEECSCTTCCSCCC
T ss_pred C--ceeeecccccc---cCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCC----cEEEEeeccccCccccccCC
Confidence 1 111111 111 1123568889999999977554 4889999999752100 00000011111111 1234
Q ss_pred eEEEEecCCc-eE-EecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 271 IFSVHWSREG-II-ASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 271 i~~~~~~~~~-~~-~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
+..+.|++++ ++ ++...++.+.+|+..... .. ...+.....+. .+.+++|+|+++.+++++..|+.|.+|++
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~----~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTASLITVFSVSEDG----SV-LSKEGFQPTET-QPRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTS----CC-EEEEEEEECSS-SCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred ccceEECCCCCEEEEEecCCCEEEEEEEcCCC----Cc-eEEeeeecCCC-ccceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 5678899876 44 466678999999765211 00 11122222333 38999999999877766668999999976
Q ss_pred c
Q 018675 349 A 349 (352)
Q Consensus 349 ~ 349 (352)
.
T Consensus 307 d 307 (343)
T 1ri6_A 307 V 307 (343)
T ss_dssp E
T ss_pred c
Confidence 4
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=9.7e-23 Score=184.40 Aligned_cols=269 Identities=14% Similarity=0.162 Sum_probs=188.4
Q ss_pred eeecCCccceEEEEEccCC--------CCCCCccEEEEeeCC------CeEEEEecCCCceeeeeeeeeecceecceEEE
Q 018675 15 QTLEGHTDRVWSLAWKPTA--------GVDGVAPVFASCSGD------KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSC 80 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~--------~~~~~~~~l~s~s~D------~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~ 80 (352)
.++.+|...+..+++++.+ .....+..++.++.+ ++|++||...... . .+ ..|...+.++
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~----~-~l-~~~~~~v~~~ 184 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ----F-VV-HRSPQPLMSP 184 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC----E-EE-EEESSCEEEE
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC----E-EE-eCCCCcceee
Confidence 4577888888877776520 000113456666654 7999999875321 1 11 2377899999
Q ss_pred EECCCCCEEEEEeCCC---cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCCCc--EEEEecCCCCeeE
Q 018675 81 AWSPSGKLLATASFDA---TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKS--VWIWEVMPGNEFE 154 (352)
Q Consensus 81 ~~s~~~~~l~s~~~d~---~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~--v~vwd~~~~~~~~ 154 (352)
+|+|||+.|++++.|+ .|.+||..+++.. .+..|...+.+++|+|+|+.|+ +++.|+. |.+||+..+.
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--- 258 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--- 258 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC---
Confidence 9999999999999885 9999998876532 4556788999999999999877 6666654 9999987553
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeC-CC--cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSY-DN--TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
...+..|...+.+++|+|+++.|+.++. ++ .|.+|+..... ...+ ..+...+.+++|+|+|++|+.
T Consensus 259 -~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~------~~~l----~~~~~~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 259 -IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA------PQRI----TWEGSQNQDADVSSDGKFMVM 327 (415)
T ss_dssp -EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC------CEEC----CCSSSEEEEEEECTTSSEEEE
T ss_pred -EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC------EEEE----ecCCCcccCeEECCCCCEEEE
Confidence 2345677788999999999998888876 45 56666654432 1111 135567889999999999998
Q ss_pred EeCC---CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCC---eEEEEEccCCccccC
Q 018675 232 CSDD---LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADD---SVQFFVESKDDLIDG 304 (352)
Q Consensus 232 ~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~---~v~~~~~~~~~~~~~ 304 (352)
++.+ ..|.+||++.... ..+.. + ..+..+.|+|++ +++.++.++ .+++|+....
T Consensus 328 ~~~~~g~~~i~~~d~~~~~~------------~~l~~-~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~----- 388 (415)
T 2hqs_A 328 VSSNGGQQHIAKQDLATGGV------------QVLSS-T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR----- 388 (415)
T ss_dssp EEECSSCEEEEEEETTTCCE------------EECCC-S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC-----
T ss_pred EECcCCceEEEEEECCCCCE------------EEecC-C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC-----
Confidence 8764 5899998753221 11111 2 267888999987 566666665 6777754321
Q ss_pred cccceeeecccccCcceeEEEecCCC
Q 018675 305 PSYKMLLKKEKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 305 ~~~~~~~~~~~~h~~~i~~~~~sp~~ 330 (352)
......+|.+.|.+++|+|-.
T Consensus 389 -----~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 389 -----FKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp -----CEEECCCSSSEEEEEEECCCC
T ss_pred -----cEEEeeCCCCCCcCCcccccc
Confidence 123456788999999999953
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=4.7e-23 Score=186.48 Aligned_cols=281 Identities=10% Similarity=0.083 Sum_probs=190.0
Q ss_pred CccceEEEEEccCCCCCCCccEEEEee----CCC----eEEEEec--CCCceeeeeeeeeecceecceEEEEECC-----
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCS----GDK----TVRIWEQ--SASSRFWNCKAVLEEMHTRTVRSCAWSP----- 84 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s----~D~----~v~~w~~--~~~~~~~~~~~~~~~~h~~~v~~~~~s~----- 84 (352)
+...|...+|.+.. ...+++|+ .|| +++|||. .+++.+.... + ..|...++.+++++
T Consensus 61 ~~~~~~~~~w~~~g-----~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~d~~~ 132 (415)
T 2hqs_A 61 SAQEVQPAAWSALG-----IDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNS--Y-KVNKQWLRYAGHTASDEVF 132 (415)
T ss_dssp SGGGCCHHHHHTTT-----CCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEE--E-EECGGGHHHHHHHHHHHHH
T ss_pred cccCcCHHHHHhcC-----CCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeE--E-EcChhHHHHHHHHHHHHHH
Confidence 33466677777753 35777886 567 9999999 7765432211 1 23555565555553
Q ss_pred ---------CCCEEEEEeCC------CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC---cEEEEe
Q 018675 85 ---------SGKLLATASFD------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK---SVWIWE 146 (352)
Q Consensus 85 ---------~~~~l~s~~~d------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~---~v~vwd 146 (352)
.+..++.++.+ +.|++||..+.. ...+.+|...|.+++|+|+|+.|++++.|+ .|++||
T Consensus 133 ~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~---~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d 209 (415)
T 2hqs_A 133 EKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN---QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQT 209 (415)
T ss_dssp HHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS---CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred HHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCC---CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEE
Confidence 25666666654 789999986543 345667889999999999999999999885 999999
Q ss_pred cCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE-EEeCCCc--EEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 147 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNT--IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~--i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
+..+.. ..+..|...+.+++|+|+++.|+ +++.++. |.+|++.... ...+ ..|...+.+++|+
T Consensus 210 ~~tg~~----~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~------~~~l----~~~~~~~~~~~~s 275 (415)
T 2hqs_A 210 LANGAV----RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ------IRQV----TDGRSNNTEPTWF 275 (415)
T ss_dssp TTTCCE----EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC------EEEC----CCCSSCEEEEEEC
T ss_pred CCCCcE----EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC------EEeC----cCCCCcccceEEC
Confidence 976542 23556777899999999999777 6666665 8888765431 1222 2466789999999
Q ss_pred CCCCEEEEEeC-CC--cEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCC---CeEEEEEc
Q 018675 224 AKGDKLVSCSD-DL--TIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAAD---DSVQFFVE 296 (352)
Q Consensus 224 ~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d---~~v~~~~~ 296 (352)
|+|++|+.++. ++ .|.+||++..... .+ ..+...+..+.|++++ +++.++.+ ..+++|+.
T Consensus 276 pdg~~l~~~s~~~g~~~i~~~d~~~~~~~------------~l-~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 276 PDSQNLAFTSDQAGRPQVYKVNINGGAPQ------------RI-TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTSSCCE------------EC-CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred CCCCEEEEEECCCCCcEEEEEECCCCCEE------------EE-ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 99999988776 55 5666665432110 11 1234457788999987 55555543 47888865
Q ss_pred cCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCC---eEEEEeecc
Q 018675 297 SKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDG---MIKIWELAN 350 (352)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg---~i~iw~~~~ 350 (352)
..... .....|. .+.+++|+|+++. |++++.|+ .|.+|++..
T Consensus 343 ~~~~~----------~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 343 ATGGV----------QVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp TTCCE----------EECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEETTS
T ss_pred CCCCE----------EEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEECCC
Confidence 43211 1123343 7999999999975 55666666 789998753
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=4.8e-21 Score=178.73 Aligned_cols=306 Identities=12% Similarity=0.162 Sum_probs=204.7
Q ss_pred eeeeeec-CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEec--CCCceeeeeeeeeecceecceEEEEECC----
Q 018675 12 REIQTLE-GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQ--SASSRFWNCKAVLEEMHTRTVRSCAWSP---- 84 (352)
Q Consensus 12 ~~~~~~~-gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~--~~~~~~~~~~~~~~~~h~~~v~~~~~s~---- 84 (352)
+.+.++. ||. +.+++|+|+ +++|++++.|++|++||+ .+.+. ...+. +...+..++|+|
T Consensus 170 ~~~~~i~~g~~--~~~v~~spd------g~~l~v~~~d~~V~v~D~~~~t~~~----~~~i~--~g~~p~~va~sp~~~~ 235 (543)
T 1nir_A 170 KIVKVIDTGYA--VHISRMSAS------GRYLLVIGRDARIDMIDLWAKEPTK----VAEIK--IGIEARSVESSKFKGY 235 (543)
T ss_dssp CEEEEEECSTT--EEEEEECTT------SCEEEEEETTSEEEEEETTSSSCEE----EEEEE--CCSEEEEEEECCSTTC
T ss_pred eEEEEEecCcc--cceEEECCC------CCEEEEECCCCeEEEEECcCCCCcE----EEEEe--cCCCcceEEeCCCcCC
Confidence 3455666 454 889999997 579999999999999999 55432 22222 345679999999
Q ss_pred CCCEEEEEeC-CCcEEEEEccCCceeeeEeecc----------ccC-CeeEEEECCCCc-EEEEeeCCCcEEEEecCCCC
Q 018675 85 SGKLLATASF-DATTCIWEDVGGDYECVATLEG----------HEN-EVKSVSWNASGT-LLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 85 ~~~~l~s~~~-d~~i~i~~~~~~~~~~~~~~~~----------h~~-~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~ 151 (352)
||++|++++. ++++.+||..+.+ ++..+.. |.+ .+.++.++|++. ++++...+++|.+||.....
T Consensus 236 dg~~l~v~~~~~~~v~v~D~~t~~--~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 236 EDRYTIAGAYWPPQFAIMDGETLE--PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp TTTEEEEEEEESSEEEEEETTTCC--EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred CCCEEEEEEccCCeEEEEeccccc--cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 9999998884 8999999976654 3444432 333 688999999765 56777889999999986554
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC-CCEE
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK-GDKL 229 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~-~~~l 229 (352)
... +..+ .+...+..+.|+|+++++++++ .++.|.+||.... ++...+......|......+ ++|+ +..+
T Consensus 314 ~l~-~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg-----~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~ 385 (543)
T 1nir_A 314 NLT-VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR-----RLSALVDVGKTPHPGRGANF-VHPKYGPVW 385 (543)
T ss_dssp SCE-EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT-----EEEEEEECSSSBCCTTCEEE-EETTTEEEE
T ss_pred cce-eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC-----eEEEeeccCCCCCCCCCccc-CCCCCccEE
Confidence 332 2222 2455677899999999776555 5889999986543 34444432223354433333 4777 6667
Q ss_pred EEEe-CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecC-------CCCeEEEEEccCCc
Q 018675 230 VSCS-DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGA-------ADDSVQFFVESKDD 300 (352)
Q Consensus 230 ~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~-------~d~~v~~~~~~~~~ 300 (352)
+++. .|++|++||++...- ....|+....+.. +......+.++|++ .+.+++ .+++|.+|+.....
T Consensus 386 ~s~~~~d~~V~v~d~~~~~~----~~~~~~~v~~l~~-~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 386 STSHLGDGSISLIGTDPKNH----PQYAWKKVAELQG-QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp EEEBSSSSEEEEEECCTTTC----TTTBTSEEEEEEC-SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred EeccCCCceEEEEEeCCCCC----chhcCeEEEEEEc-CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 7775 689999999763110 0012444444443 44556677888886 555554 26799999875432
Q ss_pred cccCccccee-eec---ccccCcceeEEEecCCCcceEEEe----cCCCeEEEEeecc
Q 018675 301 LIDGPSYKML-LKK---EKAHDMDVNSVQWSPGERRLLASA----SDDGMIKIWELAN 350 (352)
Q Consensus 301 ~~~~~~~~~~-~~~---~~~h~~~i~~~~~sp~~~~~l~s~----~~Dg~i~iw~~~~ 350 (352)
.. ...+ +.. ...+...+..++|+|+|+.++++. +.|+.|.|||..+
T Consensus 461 ~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 461 AK----YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp SC----CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CC----eEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 21 0111 110 234577899999999999877664 2589999999865
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=9.9e-21 Score=165.68 Aligned_cols=284 Identities=11% Similarity=0.045 Sum_probs=181.9
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC-CCcEEEEEccCCceeeeEeeccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF-DATTCIWEDVGGDYECVATLEGH 117 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d~~i~i~~~~~~~~~~~~~~~~h 117 (352)
...+++++.+++|.+||..+++.... + ..+...+ .++|+|+|+.+++++. ++.+.+||..+++.. ...+..+
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~----~-~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-~~~~~~~ 82 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQ----I-TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK-VVAIQEG 82 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEE----E-ECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-EEEEEEC
T ss_pred CEEEEEecCCCeEEEEeCcccceeee----E-EccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-EEecccC
Confidence 35688999999999999987653222 1 1234455 9999999997666555 889999998776531 3344445
Q ss_pred cCCeeEEEECCCCcEEEEeeCCC---cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE-EEeCCCc-EEEEec
Q 018675 118 ENEVKSVSWNASGTLLATCGRDK---SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNT-IKVWWA 192 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~~d~---~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~-i~iw~~ 192 (352)
..+..+++|+|++++++++..++ .|.+||+..+.. +..+.. ......++|+|+++.++ +...++. +.+|++
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~---~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF---ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE---EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe---EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 55555599999999988665553 899999865532 333333 33568999999998554 4556688 999987
Q ss_pred CCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE-EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcce
Q 018675 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 271 (352)
..... ..... .... .....+..++|+|+|++++ ++..++.|++||++..+. ......+. ....+
T Consensus 159 ~~~g~--~~~~~-~~~~--~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~--------~~~~~~~~--~~~~~ 223 (331)
T 3u4y_A 159 DADGV--LFDTG-QEFI--SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN--------ITLLNAVG--TNNLP 223 (331)
T ss_dssp CTTCC--EEEEE-EEEE--CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS--------CEEEEEEE--CSSCC
T ss_pred CCCCc--EeecC-Cccc--cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc--------cceeeecc--CCCCC
Confidence 64211 11110 0001 2234578999999999654 555789999999753221 01122222 23456
Q ss_pred EEEEecCCce--EEecCCCCeEEEEEccCCccccCcccceeeec---ccccCcceeEEEecCCCcceEEEecCCCeEEEE
Q 018675 272 FSVHWSREGI--IASGAADDSVQFFVESKDDLIDGPSYKMLLKK---EKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346 (352)
Q Consensus 272 ~~~~~~~~~~--~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~---~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw 346 (352)
..+.+++++. +++...++.+.+|+.....+.. ...+... ........+.++|+|+++.+++++..++.|.||
T Consensus 224 ~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 300 (331)
T 3u4y_A 224 GTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSF---VKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVF 300 (331)
T ss_dssp CCEEECTTSSEEEEECSSEEEEEEEETTTTEEEE---EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred ceEEECCCCCEEEEEEcCCCEEEEEECCCCceee---ecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEE
Confidence 6788898873 4455567788888765432210 0000000 011112236699999998877888888999999
Q ss_pred eeccC
Q 018675 347 ELANT 351 (352)
Q Consensus 347 ~~~~~ 351 (352)
++..+
T Consensus 301 d~~~~ 305 (331)
T 3u4y_A 301 TISGK 305 (331)
T ss_dssp ETTSC
T ss_pred EecCC
Confidence 98753
No 132
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=1.7e-20 Score=165.44 Aligned_cols=283 Identities=10% Similarity=0.099 Sum_probs=182.1
Q ss_pred eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC---CCcEEEEEccCCceeeeEeeccccCCee
Q 018675 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF---DATTCIWEDVGGDYECVATLEGHENEVK 122 (352)
Q Consensus 46 s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~i~i~~~~~~~~~~~~~~~~h~~~v~ 122 (352)
+.++.+.+|.++........... ..+...+..++|+|+|+ |++++. ++.|.+|+..++....+..+..+...+.
T Consensus 13 ~~~~~i~v~~~d~~tg~~~~~~~--~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~ 89 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAKTLTNDGL--LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA 89 (347)
T ss_dssp SSCCEEEEEEEETTTTEEEEEEE--EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS
T ss_pred CCCCCEEEEEEcCCCCeEEEeee--eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE
Confidence 34678888877653221111111 12345678899999999 554443 6899999987776555555556777899
Q ss_pred EEEECCCCcEEEEee-CCCcEEEEecCCCCeeEEEEEeec---------CccCeeEEEEcCCCCEEEEEeCCCcEEEEec
Q 018675 123 SVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECVSVLQG---------HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192 (352)
Q Consensus 123 ~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~---------h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~ 192 (352)
.++|+|++++|++++ .++++.+|++........+..+.. +...+.+++|+|+++++++...++.|.+|++
T Consensus 90 ~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 90 YVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNV 169 (347)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEE
Confidence 999999999888887 789999999864433333333322 1124778999999996666667889999987
Q ss_pred CCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE-EeCCCcEEEEcCCccccccCCCCccceeeEEeeccc----
Q 018675 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS-CSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYH---- 267 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---- 267 (352)
... ........+. . .....+..++|+|+|++++. +..++.+++|+++... ........+....
T Consensus 170 ~~~--g~~~~~~~~~-~--~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-------g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 170 SDA--GQLSEQSVLT-M--EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT-------GAFTQLGIVKTIPADYT 237 (347)
T ss_dssp CTT--SCEEEEEEEE-C--CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT-------TEEEEEEEEESSCTTCC
T ss_pred CCC--CcEEEeeeEE-c--CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC-------CceEEeeeeeecCCCCC
Confidence 621 1111111111 1 12245778999999996655 5678899999875310 0011111111111
Q ss_pred -CcceEEEEecCCc-eE-EecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEE
Q 018675 268 -DRTIFSVHWSREG-II-ASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 344 (352)
Q Consensus 268 -~~~i~~~~~~~~~-~~-~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~ 344 (352)
...+..+++++++ ++ ++...++.+.+|+..... ....+.....+...+..++|+|+++.++++...++.|.
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g------~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG------HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG------CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC------cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 1347788999987 34 566678999999764211 01222333445567899999999987666666679999
Q ss_pred EEeec
Q 018675 345 IWELA 349 (352)
Q Consensus 345 iw~~~ 349 (352)
+|++.
T Consensus 312 v~~~d 316 (347)
T 3hfq_A 312 LYARD 316 (347)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99663
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=2.5e-21 Score=175.91 Aligned_cols=210 Identities=13% Similarity=0.103 Sum_probs=151.3
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCC----------ceeeeeeeeeecceecceEEEEECCCCCEE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSAS----------SRFWNCKAVLEEMHTRTVRSCAWSPSGKLL 89 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~----------~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 89 (352)
....++.++++|. ..++++++.|+ +++|+.... .............+...|++++|+|+|++|
T Consensus 35 ~~~~~n~lavs~~------~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l 107 (434)
T 2oit_A 35 PKERSSLLAVSNK------YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTL 107 (434)
T ss_dssp CCSCCBCEEEETT------TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEE
T ss_pred CCCCccEEEEecC------CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEE
Confidence 4456888999986 35788888888 888864311 000110111111245679999999999999
Q ss_pred E----EEeCCCcEEEEEccCC-----c----eeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEE
Q 018675 90 A----TASFDATTCIWEDVGG-----D----YECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFEC 155 (352)
Q Consensus 90 ~----s~~~d~~i~i~~~~~~-----~----~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~ 155 (352)
+ +|+.|++|++||..+. . ......+.+|...|++++|+|+ +.+|++++.|++|++||++.. ..
T Consensus 108 av~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~---~~ 184 (434)
T 2oit_A 108 SACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET---VK 184 (434)
T ss_dssp EEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS---EE
T ss_pred EEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC---cc
Confidence 9 7889999999997542 1 1124456789999999999997 789999999999999999765 23
Q ss_pred EEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc---CCCCcccEEEEEEcCCCCEEEEE
Q 018675 156 VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES---NNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 156 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~---~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
.....+|...+.+++|+|++.+|++|+.|+.|++|+.... ....+... ...|...|.+++|++++.++++.
T Consensus 185 ~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~------~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~ 258 (434)
T 2oit_A 185 VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQ------EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVY 258 (434)
T ss_dssp EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCC------EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEE
T ss_pred eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCc------ccccccCCcccCCCCceeEEEEEEecCceEEEEE
Confidence 3445678889999999999999999999999999976521 11122111 11345589999999998887653
Q ss_pred -eCCC------cEEEEcCCc
Q 018675 233 -SDDL------TIKIWGADI 245 (352)
Q Consensus 233 -~~dg------~i~iwd~~~ 245 (352)
..|| .+++|+++.
T Consensus 259 ~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 259 AAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EETTCCSSSCCEEEEEECCC
T ss_pred ccCCCccCCCCceEEEEecc
Confidence 3443 389999864
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=1.7e-21 Score=189.11 Aligned_cols=287 Identities=10% Similarity=0.126 Sum_probs=194.6
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeC-CC-----eEEEEecCCCceeeeeeeeeeccee--------------------
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSG-DK-----TVRIWEQSASSRFWNCKAVLEEMHT-------------------- 74 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~-D~-----~v~~w~~~~~~~~~~~~~~~~~~h~-------------------- 74 (352)
...|++++|+|+ ++.|++++. |+ +|.+|+..+++...... ...+.
T Consensus 36 ~~~~~~~~~Spd------G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (741)
T 2ecf_A 36 GPTLMKPKVAPD------GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD---SKVVLPGTETLSDEEKARRERQRIA 106 (741)
T ss_dssp CCCCEEEEECTT------SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC---GGGTC--------------------
T ss_pred CCCCCCceEecC------CCEEEEEeccCCCCcccEEEEEECCCCceeEccc---hhhcccccccccchhhhhhhhhhhc
Confidence 457899999997 578999998 88 99999998764321110 00111
Q ss_pred --cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCe
Q 018675 75 --RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 75 --~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 152 (352)
..|.+++|||||+.|++++. +.|.+|+..++.......+..|...+..++|+|+|++|+.++. +.|.+||+..+..
T Consensus 107 ~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 107 AMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQ 184 (741)
T ss_dssp CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEE
T ss_pred cccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCE
Confidence 23788999999999999886 8999999876510012345567788999999999999998875 5899999865432
Q ss_pred eEEEEEeecCccC----------------eeEEEEcCCCCEEEEEeCCC-------------------------------
Q 018675 153 FECVSVLQGHAQD----------------VKMVQWHPTMDVLFSCSYDN------------------------------- 185 (352)
Q Consensus 153 ~~~~~~~~~h~~~----------------v~~~~~~~~~~~l~s~~~d~------------------------------- 185 (352)
......+... +..+.|+|+++.|++++.|+
T Consensus 185 ---~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 185 ---MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp ---EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred ---EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 2222222221 46789999999999887765
Q ss_pred --cEEEEecCC-CCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC-----CCcEEEEcCCccccccCCCCccc
Q 018675 186 --TIKVWWAED-TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-----DLTIKIWGADITRMQSGDGYASW 257 (352)
Q Consensus 186 --~i~iw~~~~-~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~ 257 (352)
.|.+|++.. ... ..+. ....|...+.+++| |||++|+.++. +..|.+||+.....
T Consensus 262 ~~~l~~~d~~~~~~~------~~~~-~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~--------- 324 (741)
T 2ecf_A 262 QVKLGVISPAEQAQT------QWID-LGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ--------- 324 (741)
T ss_dssp EEEEEEECSSTTCCC------EEEC-CCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE---------
T ss_pred eeEEEEEECCCCCce------EEec-CCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce---------
Confidence 677776543 221 1111 11246788999999 99999987653 56799998753221
Q ss_pred eeeEEeecccCc---ceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEE-EecCCCcc
Q 018675 258 RHLCTISGYHDR---TIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV-QWSPGERR 332 (352)
Q Consensus 258 ~~~~~~~~~~~~---~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~-~~sp~~~~ 332 (352)
.. .+...... .+..+.|++++ ++++++.++...+|..... +. ......|...|..+ +|+|+++.
T Consensus 325 ~~--~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~----~~-----~~~l~~~~~~v~~~~~~s~dg~~ 393 (741)
T 2ecf_A 325 RV--LAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSK----GK-----AAALTHGNWSVDELLAVDEKAGL 393 (741)
T ss_dssp EE--EEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSS----SC-----EEESCCSSSCEEEEEEEETTTTE
T ss_pred EE--EEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCC----CC-----eeeeeecceEEEeEeEEeCCCCE
Confidence 11 11111111 23456788876 6777788888888855321 11 22345667778887 59999987
Q ss_pred eEEEecCCC--eEEEEeec
Q 018675 333 LLASASDDG--MIKIWELA 349 (352)
Q Consensus 333 ~l~s~~~Dg--~i~iw~~~ 349 (352)
++++++.|+ .++||++.
T Consensus 394 l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 394 AYFRAGIESARESQIYAVP 412 (741)
T ss_dssp EEEEECSSCTTCBEEEEEE
T ss_pred EEEEEeCCCCceEEEEEEE
Confidence 777787777 89999985
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=3.1e-21 Score=165.40 Aligned_cols=259 Identities=14% Similarity=0.094 Sum_probs=172.7
Q ss_pred EeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccC-CceeeeEeeccc-cCCe
Q 018675 44 SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVG-GDYECVATLEGH-ENEV 121 (352)
Q Consensus 44 s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~-~~~~~~~~~~~h-~~~v 121 (352)
+++.|++|++|+..++... .. ..|...|.+++|+|+|++|++++ ++.+.+|+..+ ++. ......+ ...+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~----~~--~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR----VV--WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP--EKVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE----EE--EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC--EECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCCcee----ee--ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc--eEeccccccccc
Confidence 4568999999999876421 11 23678899999999999999886 78999999877 543 2333344 4678
Q ss_pred eEEEECCCCcEEEEee--CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE-EEeCCCcEEEEecCCCCCC
Q 018675 122 KSVSWNASGTLLATCG--RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSD 198 (352)
Q Consensus 122 ~~v~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~iw~~~~~~~~ 198 (352)
.+++|+|++++|++++ .++...+|.+...... ...+..+ ..+..++|+|+++.++ +++.++.+++|++.....
T Consensus 88 ~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~- 163 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT--PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG- 163 (297)
T ss_dssp SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC--CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-
T ss_pred cceEECCCCCEEEEEEeCCCCcceEEEEECCCCc--eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC-
Confidence 9999999999999998 4455666655322111 2223333 3488899999999776 788899999997643211
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEec
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS 277 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 277 (352)
. ...+ ..+...+.++.|+|++++|+.++ .++.+++|+++.... ....+. .+...+..+.|+
T Consensus 164 ~---~~~~----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~----------~~~~~~-~~~~~~~~~~~s 225 (297)
T 2ojh_A 164 V---ETRL----THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS----------SVERIT-DSAYGDWFPHPS 225 (297)
T ss_dssp C---EEEC----CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS----------CEEECC-CCSEEEEEEEEC
T ss_pred c---ceEc----ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC----------CcEEEe-cCCcccCCeEEC
Confidence 1 1112 24567899999999999888666 589999998653210 111111 234457788999
Q ss_pred CCc-eEEecCCC-----------CeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCC
Q 018675 278 REG-IIASGAAD-----------DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDD 340 (352)
Q Consensus 278 ~~~-~~~s~~~d-----------~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~D 340 (352)
+++ +++.++.+ +.+.+|+...... ..+....+|...+..++|+|+++.+++++..+
T Consensus 226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV-------ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC-------EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc-------eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 876 56655554 4577776543211 11223346788899999999998655444443
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.2e-20 Score=175.97 Aligned_cols=280 Identities=11% Similarity=0.073 Sum_probs=189.5
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEc--cCCceeeeEeecc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED--VGGDYECVATLEG 116 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~--~~~~~~~~~~~~~ 116 (352)
+.++++++.|++|.+||..+++... .+...+ .+..++|+|||++|++++.|++|.+||. .++ .++..+.
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~----~i~~g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--~~~~~i~- 219 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVK----VIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEP--TKVAEIK- 219 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEE----EEECST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--EEEEEEE-
T ss_pred CEEEEEEcCCCeEEEEECCCceEEE----EEecCc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCC--cEEEEEe-
Confidence 5789999999999999998765322 222122 3789999999999999999999999998 554 4455665
Q ss_pred ccCCeeEEEECC----CCcEEEEee-CCCcEEEEecCCCCeeEEEEEeec-------Cc-cCeeEEEEcCCCCE-EEEEe
Q 018675 117 HENEVKSVSWNA----SGTLLATCG-RDKSVWIWEVMPGNEFECVSVLQG-------HA-QDVKMVQWHPTMDV-LFSCS 182 (352)
Q Consensus 117 h~~~v~~v~~~~----~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~-------h~-~~v~~~~~~~~~~~-l~s~~ 182 (352)
+...+..++|+| +|+++++++ .+++|.+||....+....+..... |. ..+..+.++|++.. +++..
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 345689999999 999998887 489999999876554333221100 22 26788999997664 56677
Q ss_pred CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCCccccccCCCCccceeeE
Q 018675 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADITRMQSGDGYASWRHLC 261 (352)
Q Consensus 183 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 261 (352)
.++.|.+|+...... . ...++ .+...+..+.|+|+|++++++ ..+++|++||.+..+.. .
T Consensus 300 ~~g~i~vvd~~~~~~--l-~~~~i-----~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~-----------~ 360 (543)
T 1nir_A 300 ETGKVLLVNYKDIDN--L-TVTSI-----GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS-----------A 360 (543)
T ss_dssp TTTEEEEEECTTSSS--C-EEEEE-----ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE-----------E
T ss_pred CCCeEEEEEecCCCc--c-eeEEe-----ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE-----------E
Confidence 889999998765321 1 11222 134557789999999987655 46899999998643221 1
Q ss_pred Eeec---ccCcceEEEEecCC-c-eEEecC-CCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEE
Q 018675 262 TISG---YHDRTIFSVHWSRE-G-IIASGA-ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLA 335 (352)
Q Consensus 262 ~~~~---~~~~~i~~~~~~~~-~-~~~s~~-~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~ 335 (352)
.+.. .|......+. +++ + .++++. .|++|.+|+.....-. .....++++..+|...+..++|+|++++++
T Consensus 361 ~i~~g~~ph~g~g~~~~-~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~- 436 (543)
T 1nir_A 361 LVDVGKTPHPGRGANFV-HPKYGPVWSTSHLGDGSISLIGTDPKNHP--QYAWKKVAELQGQGGGSLFIKTHPKSSHLY- 436 (543)
T ss_dssp EEECSSSBCCTTCEEEE-ETTTEEEEEEEBSSSSEEEEEECCTTTCT--TTBTSEEEEEECSCSCCCCEECCTTCCEEE-
T ss_pred eeccCCCCCCCCCcccC-CCCCccEEEeccCCCceEEEEEeCCCCCc--hhcCeEEEEEEcCCCCceEEEcCCCCCcEE-
Confidence 1111 1222222232 343 4 456654 6899999976531110 011234566678888889999999998654
Q ss_pred Eec-------CCCeEEEEeecc
Q 018675 336 SAS-------DDGMIKIWELAN 350 (352)
Q Consensus 336 s~~-------~Dg~i~iw~~~~ 350 (352)
+++ .+++|.|||+.+
T Consensus 437 v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 437 VDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp ECCTTCSSHHHHTCEEEEETTC
T ss_pred EecCCCCCcccCceEEEEECCC
Confidence 554 278999999874
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=6.2e-21 Score=184.59 Aligned_cols=291 Identities=11% Similarity=0.103 Sum_probs=181.9
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceec---ceEEEEECCCCCEEEEEeCC----
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR---TVRSCAWSPSGKLLATASFD---- 95 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~~~d---- 95 (352)
.+.+++|+|+ ++++++ +.|++|++|+..+++.. ..+ ..|.. .|.+++|||||++|++++.+
T Consensus 18 ~~~~~~~spd------g~~~~~-~~dg~i~~~d~~~g~~~----~~~-~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 18 HDPEAKWISD------TEFIYR-EQKGTVRLWNVETNTST----VLI-EGKKIESLRAIRYEISPDREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCCBSSS------SCBCCC-CSSSCEEEBCGGGCCCE----EEE-CTTTTTTTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred cccccEEcCC------CcEEEE-eCCCCEEEEECCCCcEE----EEe-ccccccccccceEEECCCCCEEEEEecCccce
Confidence 4678899997 456665 78999999999876431 122 22332 48999999999999999875
Q ss_pred -----CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC-----
Q 018675 96 -----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD----- 165 (352)
Q Consensus 96 -----~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~----- 165 (352)
+.+.+||..+++...+....+|...+..++|+|+|+.|+.++. +.|++||+..+... .....+...
T Consensus 86 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~---~~~~~~~~~~~~~g 161 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI---RVVSTGKEGVIYNG 161 (723)
T ss_dssp SSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE---EEECCCBTTTEEEE
T ss_pred eecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE---EEecCCCCCceECc
Confidence 6788999887754333333455556899999999999998886 78999998765432 222333322
Q ss_pred -------------eeEEEEcCCCCEEEEEeCCC----------------------------------cEEEEecCCCCCC
Q 018675 166 -------------VKMVQWHPTMDVLFSCSYDN----------------------------------TIKVWWAEDTDSD 198 (352)
Q Consensus 166 -------------v~~~~~~~~~~~l~s~~~d~----------------------------------~i~iw~~~~~~~~ 198 (352)
+..+.|+|+++.|++++.|+ .|.+|++.....
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~- 240 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH- 240 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-
T ss_pred ccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-
Confidence 27899999999999887653 677777654321
Q ss_pred CceeEeeeec--cCCCCcccEEEEEEcCCCCEEEEEeC----CCcEEEEcCCccccccCCCCccceeeEEeecccCcce-
Q 018675 199 NWHCVQTISE--SNNGHSSTIWALSFNAKGDKLVSCSD----DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI- 271 (352)
Q Consensus 199 ~~~~~~~~~~--~~~~h~~~i~~l~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i- 271 (352)
...+.. ....+...+.+++|+|||+++++.+. +..|.+||+...+.. . .+...+...+
T Consensus 241 ----~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~---------~--~~~~~~~~~~~ 305 (723)
T 1xfd_A 241 ----DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT---------K--KHEDESEAWLH 305 (723)
T ss_dssp ----CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE---------E--EEEEECSSCCC
T ss_pred ----eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce---------E--EEEeccCCEEe
Confidence 111110 01123567899999999998877653 357899987532210 1 1111111111
Q ss_pred ---EEEEecCCce-EE-e-cCCCC----eEEEEEccCCccccCcccceeeecccccCcceeE-EEecCCCcceEEEecCC
Q 018675 272 ---FSVHWSREGI-IA-S-GAADD----SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS-VQWSPGERRLLASASDD 340 (352)
Q Consensus 272 ---~~~~~~~~~~-~~-s-~~~d~----~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~sp~~~~~l~s~~~D 340 (352)
..+.|+|++. ++ . ...++ ...+|... ....... ........+...+.. ++|+|+++.++.++..+
T Consensus 306 ~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d---~~~~~~~-~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~ 381 (723)
T 1xfd_A 306 RQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS---SQPNSSN-DNIQSITSGDWDVTKILAYDEKGNKIYFLSTED 381 (723)
T ss_dssp CCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC---SSCCSSS-CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSS
T ss_pred ccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe---ccCCCCc-cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCC
Confidence 2567888773 33 2 45566 44444322 0000000 001112223344554 69999998765566666
Q ss_pred --CeEEEEeec
Q 018675 341 --GMIKIWELA 349 (352)
Q Consensus 341 --g~i~iw~~~ 349 (352)
+.++||++.
T Consensus 382 ~~~~~~l~~~~ 392 (723)
T 1xfd_A 382 LPRRRQLYSAN 392 (723)
T ss_dssp CTTCCEEEEEC
T ss_pred CCcceEEEEEe
Confidence 889999985
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=1.3e-18 Score=152.54 Aligned_cols=258 Identities=10% Similarity=0.147 Sum_probs=167.0
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCC-CeEEEEecC--CCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC-
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGD-KTVRIWEQS--ASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF- 94 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D-~~v~~w~~~--~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~- 94 (352)
.|...+.+++|+|+ ++++++++.+ +.+++|++. ++.. .....+. ....+..++|+|+|+.|++++.
T Consensus 35 ~~~~~~~~~~~spd------g~~l~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~ 104 (343)
T 1ri6_A 35 DVPGQVQPMVVSPD------KRYLYVGVRPEFRVLAYRIAPDDGAL--TFAAESA--LPGSLTHISTDHQGQFVFVGSYN 104 (343)
T ss_dssp ECSSCCCCEEECTT------SSEEEEEETTTTEEEEEEECTTTCCE--EEEEEEE--CSSCCSEEEECTTSSEEEEEETT
T ss_pred ecCCCCceEEECCC------CCEEEEeecCCCeEEEEEecCCCCce--eeccccc--cCCCCcEEEEcCCCCEEEEEecC
Confidence 47778999999997 4677777776 999999987 3321 1111111 1237889999999998876665
Q ss_pred CCcEEEEEccCCc-eeeeEeeccccCCeeEEEECCCCcEEEEee-CCCcEEEEecCCCCeeEEEE--Eeec-CccCeeEE
Q 018675 95 DATTCIWEDVGGD-YECVATLEGHENEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECVS--VLQG-HAQDVKMV 169 (352)
Q Consensus 95 d~~i~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~--~~~~-h~~~v~~~ 169 (352)
++.+.+|+...+. ......+.. ...+.+++|+|+++++++++ .++.|.+||+.......... .... ....+..+
T Consensus 105 ~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 105 AGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp TTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred CCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 7889999974322 223333333 34688999999999888777 89999999997623222222 2222 23467889
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeeccCCC--CcccEEEEEEcCCCCEEE-EEeCCCcEEEEcCCc
Q 018675 170 QWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNNG--HSSTIWALSFNAKGDKLV-SCSDDLTIKIWGADI 245 (352)
Q Consensus 170 ~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~--h~~~i~~l~~~~~~~~l~-s~~~dg~i~iwd~~~ 245 (352)
+|+|+++++++++ .++.+.+|++.... ..............+ ....+..++|+|++++|+ ++..++.|++|+++.
T Consensus 184 ~~~pdg~~l~~~~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 184 VFHPNEQYAYCVNELNSSVDVWELKDPH-GNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEESSCTT-SCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCC-CcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 9999999776554 78999999875321 122222222211112 134677899999998877 555799999998752
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecC-CCCeEEEEEcc
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGA-ADDSVQFFVES 297 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~-~d~~v~~~~~~ 297 (352)
.. ........+.. . ..+..+++++++ ++++++ .++.+.+|...
T Consensus 263 ~~-------~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 263 DG-------SVLSKEGFQPT-E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TS-------CCEEEEEEEEC-S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CC-------CceEEeeeecC-C-CccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 10 01122222221 2 236778899876 455544 68999999543
No 139
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2.4e-20 Score=169.49 Aligned_cols=207 Identities=15% Similarity=0.130 Sum_probs=144.7
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCC-----------cee---eeEeeccccCCeeEEEECCCCcEEE----Ee
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGG-----------DYE---CVATLEGHENEVKSVSWNASGTLLA----TC 136 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~-----------~~~---~~~~~~~h~~~v~~v~~~~~~~~l~----s~ 136 (352)
..++.+++++++.++++++.|+ +++|+.... ... .... ..+...|++++|+|++++|+ ++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEecc
Confidence 4578899999999999999887 888764210 000 0011 13566799999999999999 88
Q ss_pred eCCCcEEEEecCCC--------CeeEEEEEeecCccCeeEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceeEeeee
Q 018675 137 GRDKSVWIWEVMPG--------NEFECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 207 (352)
Q Consensus 137 ~~d~~v~vwd~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~ 207 (352)
+.|++|++||+... +....+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+... ......
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-----~~~~~~- 188 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-----VKVCAT- 188 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-----EEEEEE-
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-----cceeec-
Confidence 99999999998543 222335566789999999999998 789999999999999987653 112111
Q ss_pred ccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEe--c
Q 018675 208 ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIAS--G 285 (352)
Q Consensus 208 ~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s--~ 285 (352)
.+|...|.+++|+|+|++|++|+.||+|++||.+........... .....|...+.++.|++++.++. .
T Consensus 189 ---~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~------~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 189 ---LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPP------FYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp ---ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCT------TCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred ---cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCc------ccCCCCceeEEEEEEecCceEEEEEc
Confidence 257889999999999999999999999999997621110000000 00011223688899998875442 2
Q ss_pred CCCC------eEEEEEccC
Q 018675 286 AADD------SVQFFVESK 298 (352)
Q Consensus 286 ~~d~------~v~~~~~~~ 298 (352)
..+| .+++|+...
T Consensus 260 ~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 260 AADGTLETSPDVVMALLPK 278 (434)
T ss_dssp ETTCCSSSCCEEEEEECCC
T ss_pred cCCCccCCCCceEEEEecc
Confidence 2232 377887654
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=1.2e-19 Score=175.10 Aligned_cols=284 Identities=13% Similarity=0.137 Sum_probs=183.2
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~ 101 (352)
..|.+++|+|+ . .++++ .|+++++|++.++.. ... ..+...+.+++|+|||+.|+++ .|+.|.+|
T Consensus 82 ~~v~~~~~spd-~-----~~~~~--~~~~i~~~d~~~~~~----~~l--~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~ 146 (706)
T 2z3z_A 82 FPSFRTLDAGR-G-----LVVLF--TQGGLVGFDMLARKV----TYL--FDTNEETASLDFSPVGDRVAYV-RNHNLYIA 146 (706)
T ss_dssp CCCEEEEETTT-T-----EEEEE--ETTEEEEEETTTTEE----EEE--ECCTTCCTTCEECTTSSEEEEE-ETTEEEEE
T ss_pred cCceeEEECCC-C-----eEEEE--ECCEEEEEECCCCce----EEc--cCCcccccCCcCCCCCCEEEEE-ECCeEEEE
Confidence 56999999997 2 34444 469999999977532 111 1245668889999999999985 68999999
Q ss_pred EccC-----CceeeeEeeccccCC--------------eeEEEECCCCcEEEEee-------------------------
Q 018675 102 EDVG-----GDYECVATLEGHENE--------------VKSVSWNASGTLLATCG------------------------- 137 (352)
Q Consensus 102 ~~~~-----~~~~~~~~~~~h~~~--------------v~~v~~~~~~~~l~s~~------------------------- 137 (352)
+..+ ++.. .....+... +.++.|+|+|++|++++
T Consensus 147 ~~~~~~~~~g~~~--~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 224 (706)
T 2z3z_A 147 RGGKLGEGMSRAI--AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLY 224 (706)
T ss_dssp ECBCTTSCCCCCE--ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEEC
T ss_pred ecCcccccCCCcE--EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEee
Confidence 9876 5432 222222222 58999999999999887
Q ss_pred --------CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC-----cEEEEecCCCCCCCceeEe
Q 018675 138 --------RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TIKVWWAEDTDSDNWHCVQ 204 (352)
Q Consensus 138 --------~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~~~~ 204 (352)
.+..|.+||+..+.. ..+.....|...+..++|+|+++.+++++.++ .|.+|+..... ...
T Consensus 225 y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-----~~~ 298 (706)
T 2z3z_A 225 YPMAGTPSHHVTVGIYHLATGKT-VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-----FVR 298 (706)
T ss_dssp CCBTTSCCCEEEEEEEETTTTEE-EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-----EEE
T ss_pred CCCCCCCCCeeEEEEEECCCCce-EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-----eee
Confidence 457899999865432 11111124556789999999999999888776 89999875431 111
Q ss_pred eee-ccCCCCcccEEEEEEcC--CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEE-EEecCCc
Q 018675 205 TIS-ESNNGHSSTIWALSFNA--KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS-VHWSREG 280 (352)
Q Consensus 205 ~~~-~~~~~h~~~i~~l~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~ 280 (352)
.+. .........+.++.|+| +|+++++++.||.+++|.++... .....+. .+...+.. +.|++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~----------~~~~~l~-~~~~~v~~~~~~spdg 367 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG----------RLIRQVT-KGEWEVTNFAGFDPKG 367 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS----------CEEEECC-CSSSCEEEEEEECTTS
T ss_pred EEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC----------CEEEecC-CCCeEEEeeeEEcCCC
Confidence 111 11111112345689999 99999999999999999764210 1111121 12334554 6888876
Q ss_pred -e-EEecCCCC----eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCC---CeEEEEeecc
Q 018675 281 -I-IASGAADD----SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDD---GMIKIWELAN 350 (352)
Q Consensus 281 -~-~~s~~~d~----~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~D---g~i~iw~~~~ 350 (352)
. ++++..++ .+..|+..... . . ...|...+.+++|||+++.++++++.+ +.|.+|++..
T Consensus 368 ~~l~~~~~~~~~~~~~l~~~d~~~~~---------~-~-~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 368 TRLYFESTEASPLERHFYCIDIKGGK---------T-K-DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp SEEEEEESSSCTTCBEEEEEETTCCC---------C-E-ESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred CEEEEEecCCCCceEEEEEEEcCCCC---------c-e-eccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 3 44455444 34444332211 1 1 123566799999999998665555544 5699999764
No 141
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=5.7e-18 Score=150.11 Aligned_cols=281 Identities=14% Similarity=0.131 Sum_probs=173.9
Q ss_pred eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC----CcEEEEEccC--CceeeeEeeccccC
Q 018675 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD----ATTCIWEDVG--GDYECVATLEGHEN 119 (352)
Q Consensus 46 s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----~~i~i~~~~~--~~~~~~~~~~~h~~ 119 (352)
+.++.+.+|.++............ +...+..++|+|+|++|++++.+ +.+.+|+... +....+.....+..
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~---~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA---EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA 100 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE---ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc---cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC
Confidence 356789999775432211211111 55677889999999999998886 7999998654 44444555544556
Q ss_pred CeeEEEECCCCcEEEEee-CCCcEEEEecCCCCeeEEE-E--Eeec--------CccCeeEEEEcCCCCEEEEEe-CCCc
Q 018675 120 EVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECV-S--VLQG--------HAQDVKMVQWHPTMDVLFSCS-YDNT 186 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~-~--~~~~--------h~~~v~~~~~~~~~~~l~s~~-~d~~ 186 (352)
.+..+++ ++++|++++ .++++.+|++......... . ...+ +...+.+++|+|+++++++++ .++.
T Consensus 101 ~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 101 DPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp CEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 6778887 777766666 6789999998643322111 1 1111 112346799999999766555 4789
Q ss_pred EEEEecCCCCC----CCceeE---eeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCcEEEEcCCccccccCCCCccce
Q 018675 187 IKVWWAEDTDS----DNWHCV---QTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGADITRMQSGDGYASWR 258 (352)
Q Consensus 187 i~iw~~~~~~~----~~~~~~---~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (352)
+.+|++..... ...... .... ..+...+..++|+|+|+++++++ .++.|.+|+++...+ .
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~---------~ 246 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFK---VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML---------D 246 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEE---CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE---------E
T ss_pred EEEEEEcCCCCcccccceeeccccccee---cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce---------E
Confidence 99998754321 001110 1111 12345678899999999887766 689999998752211 1
Q ss_pred eeEEee--cccCcceEEEEecCCc-eE-EecCC-CCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcce
Q 018675 259 HLCTIS--GYHDRTIFSVHWSREG-II-ASGAA-DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRL 333 (352)
Q Consensus 259 ~~~~~~--~~~~~~i~~~~~~~~~-~~-~s~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~ 333 (352)
....+. ..+......+.+++++ ++ ++... ++.+.+|...... . .. ..+..... ...+.+++|+|+++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~---g-~~-~~~~~~~~-g~~~~~~~~spdg~~l 320 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN---G-TL-TKVGYQLT-GIHPRNFIITPNGKYL 320 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT---C-CE-EEEEEEEC-SSCCCEEEECTTSCEE
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC---C-cE-EEeeEecC-CCCCceEEECCCCCEE
Confidence 111111 1122345788999987 44 34444 5889999764210 0 00 11111222 4568899999999877
Q ss_pred EEEecCCCeEEEEeec
Q 018675 334 LASASDDGMIKIWELA 349 (352)
Q Consensus 334 l~s~~~Dg~i~iw~~~ 349 (352)
+++...++.|.+|++.
T Consensus 321 ~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 321 LVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEETTTTEEEEEEEC
T ss_pred EEEECCCCCEEEEEEE
Confidence 7666688999998764
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=8.4e-18 Score=148.12 Aligned_cols=274 Identities=8% Similarity=0.088 Sum_probs=182.2
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeC-------CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE-E
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSG-------DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA-T 91 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~-------D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s 91 (352)
....+.+++|+|+ ++.++.++. +++|.+||..+.+...... ....+..++|+|+|+.++ +
T Consensus 39 ~~~~~~~~~~s~d------g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~v~ 106 (353)
T 3vgz_A 39 VGKGAYEMAYSQQ------ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH------NDLKPFGATINNTTQTLWFG 106 (353)
T ss_dssp EESSEEEEEEETT------TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE------ESSCCCSEEEETTTTEEEEE
T ss_pred hccCccceEECCC------CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe------cCCCcceEEECCCCCEEEEE
Confidence 3456788999997 345666553 6789999998765432211 234567889999998554 5
Q ss_pred EeCCCcEEEEEccCCceeeeEeeccccC---------CeeEEEECCCCcEEEEee--CCCcEEEEecCCCCeeEEEEEee
Q 018675 92 ASFDATTCIWEDVGGDYECVATLEGHEN---------EVKSVSWNASGTLLATCG--RDKSVWIWEVMPGNEFECVSVLQ 160 (352)
Q Consensus 92 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~---------~v~~v~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~ 160 (352)
...++.+.+||..+++. ...+..+.. .+.++.|+|++++++.++ .++.|.+||+..++ .+..+.
T Consensus 107 ~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~---~~~~~~ 181 (353)
T 3vgz_A 107 NTVNSAVTAIDAKTGEV--KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK---LKTAIQ 181 (353)
T ss_dssp ETTTTEEEEEETTTCCE--EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE---EEEEEC
T ss_pred ecCCCEEEEEeCCCCee--EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc---eEEEec
Confidence 55579999999877653 333333221 268899999999777665 47889999986543 334444
Q ss_pred cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCcEE
Q 018675 161 GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIK 239 (352)
Q Consensus 161 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~i~ 239 (352)
.+...+..+.|+|+++.+++++.++.+.+|+.... .....+.....++...+..++|+|++++++.++ .++.|.
T Consensus 182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 256 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTADN-----KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVL 256 (353)
T ss_dssp CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT-----EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEE
T ss_pred CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC-----eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEE
Confidence 34455788899999999999999999999986542 223333222234556788999999999776655 459999
Q ss_pred EEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCCccccCcccceeeeccccc
Q 018675 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH 317 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h 317 (352)
+||....+. ...+.... ...+.+++++ .+++...++.+.+|+..... ++.... .
T Consensus 257 ~~d~~~~~~-----------~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---------~~~~~~-~ 312 (353)
T 3vgz_A 257 VVDTRNGNI-----------LAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK---------VVKTFD-T 312 (353)
T ss_dssp EEETTTCCE-----------EEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTE---------EEEEEE-C
T ss_pred EEECCCCcE-----------EEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEECCCCe---------EEEEEe-c
Confidence 998753221 11111111 2346777765 45566678999999764321 111121 2
Q ss_pred CcceeEEEecCCCcceEEEecC
Q 018675 318 DMDVNSVQWSPGERRLLASASD 339 (352)
Q Consensus 318 ~~~i~~~~~sp~~~~~l~s~~~ 339 (352)
...+.+++|+|+++.++++...
T Consensus 313 ~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 313 PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CSEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCCeEEEcCCCCEEEEEEcc
Confidence 3468999999999877776654
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=2.7e-19 Score=153.27 Aligned_cols=239 Identities=16% Similarity=0.156 Sum_probs=161.5
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCC-CceeeeeeeeeecceecceEEEEECCCCCEEEEEe-
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSA-SSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS- 93 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~- 93 (352)
.+..|...|.+++|+|+ +++|++++ ++.|.+|++.+ +.. .......+...+.+++|+|+|+.|++++
T Consensus 36 ~~~~~~~~v~~~~~spd------g~~l~~~~-~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 104 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPD------GKYLLLNS-EGLLYRLSLAGDPSP----EKVDTGFATICNNDHGISPDGALYAISDK 104 (297)
T ss_dssp EEEEESSCCEEEEECTT------SSEEEEEE-TTEEEEEESSSCCSC----EECCCTTCCCBCSCCEECTTSSEEEEEEC
T ss_pred eeccCCcceEeeEECCC------CCEEEEEc-CCeEEEEeCCCCCCc----eEeccccccccccceEECCCCCEEEEEEe
Confidence 45678999999999997 56888876 88999999987 532 1122122346788999999999999998
Q ss_pred -CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 94 -FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 94 -~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
.++...||........ ...+.. ...+..++|+|+++.|+ +++.|+.+.+|++..... ....+..+...+.++.|
T Consensus 105 ~~~~~~~l~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~ 180 (297)
T 2ojh_A 105 VEFGKSAIYLLPSTGGT-PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGEGRNDGPDY 180 (297)
T ss_dssp TTTSSCEEEEEETTCCC-CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEECCCSSSCEEEEEE
T ss_pred CCCCcceEEEEECCCCc-eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEcccCCCccccceE
Confidence 4456666654321111 223333 33588999999999876 788899999999643221 12345567778999999
Q ss_pred cCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC-----------CcEE
Q 018675 172 HPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD-----------LTIK 239 (352)
Q Consensus 172 ~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d-----------g~i~ 239 (352)
+|+++.++.++ .++.+++|.+..... ....+ ..|...+.++.|+|++++|+.++.+ +.|.
T Consensus 181 s~dg~~l~~~~~~~~~~~i~~~~~~~~----~~~~~----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 181 SPDGRWIYFNSSRTGQMQIWRVRVDGS----SVERI----TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSS----CEEEC----CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred CCCCCEEEEEecCCCCccEEEECCCCC----CcEEE----ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 99999877666 589999997642211 11222 2456788999999999999988765 5699
Q ss_pred EEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCC
Q 018675 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAA 287 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~ 287 (352)
+||++..+. ..+.... .+...+..+.|++++ .++.++.
T Consensus 253 ~~d~~~~~~---------~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 253 LMDMDGGNV---------ETLFDLF-GGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEETTSCSC---------EEEEEEE-ESTTTSCSCCBCTTSSEEEEEEE
T ss_pred EEecCCCCc---------eeeeccC-CCCcccccceECCCCCEEEEEEe
Confidence 998753211 1122111 234556677788766 4544443
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=8.8e-19 Score=169.98 Aligned_cols=283 Identities=10% Similarity=0.101 Sum_probs=183.3
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCc--eeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASS--RFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~--~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
.|.+++|+|+ +++|++++. ++|.+|++.++. .. .. + ..|...+..++|||||+.|+.++ ++.|.+
T Consensus 110 ~v~~~~~SpD------g~~l~~~~~-~~i~~~d~~~~~~~~~---~~-l-~~~~~~~~~~~~SPDG~~la~~~-~~~i~~ 176 (741)
T 2ecf_A 110 GIVDYQWSPD------AQRLLFPLG-GELYLYDLKQEGKAAV---RQ-L-THGEGFATDAKLSPKGGFVSFIR-GRNLWV 176 (741)
T ss_dssp ESCCCEECTT------SSEEEEEET-TEEEEEESSSCSTTSC---CB-C-CCSSSCEEEEEECTTSSEEEEEE-TTEEEE
T ss_pred CcceeEECCC------CCEEEEEeC-CcEEEEECCCCCcceE---EE-c-ccCCcccccccCCCCCCEEEEEe-CCcEEE
Confidence 4889999997 578888876 999999987651 11 11 1 23567899999999999999887 468999
Q ss_pred EEccCCceeeeEeeccccCC----------------eeEEEECCCCcEEEEeeCCC------------------------
Q 018675 101 WEDVGGDYECVATLEGHENE----------------VKSVSWNASGTLLATCGRDK------------------------ 140 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~~~----------------v~~v~~~~~~~~l~s~~~d~------------------------ 140 (352)
|+..+++.. .....+... +..+.|+|+|++|++++.|+
T Consensus 177 ~d~~~g~~~--~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 177 IDLASGRQM--QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EETTTTEEE--ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EecCCCCEE--EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 998766432 222222221 47899999999999988765
Q ss_pred ---------cEEEEecCC-CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-----CCcEEEEecCCCCCCCceeEee
Q 018675 141 ---------SVWIWEVMP-GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-----DNTIKVWWAEDTDSDNWHCVQT 205 (352)
Q Consensus 141 ---------~v~vwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----d~~i~iw~~~~~~~~~~~~~~~ 205 (352)
.|.+||+.. +... .+.....|...+..++| |+++.|+.++. +..|.+|+..... ....
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~-----~~~~ 327 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQTQ-WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ-----QRVL 327 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCCE-EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC-----EEEE
T ss_pred CCCCCCCeeEEEEEECCCCCceE-EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc-----eEEE
Confidence 788899865 5421 11111146677899999 99998887654 4578899875432 1112
Q ss_pred eeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEE-EecCCc-e-E
Q 018675 206 ISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSV-HWSREG-I-I 282 (352)
Q Consensus 206 ~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~-~-~ 282 (352)
+.....+....+.++.|+|+|+++++++.||.++||..+... . ...+. .+...+..+ .|++++ . +
T Consensus 328 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~----------~-~~~l~-~~~~~v~~~~~~s~dg~~l~ 395 (741)
T 2ecf_A 328 AHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG----------K-AAALT-HGNWSVDELLAVDEKAGLAY 395 (741)
T ss_dssp EEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS----------C-EEESC-CSSSCEEEEEEEETTTTEEE
T ss_pred EEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC----------C-eeeee-ecceEEEeEeEEeCCCCEEE
Confidence 211111111134578999999999999999988888654210 0 11111 133445565 588876 3 4
Q ss_pred EecCCCC--eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCC---CeEEEEee
Q 018675 283 ASGAADD--SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDD---GMIKIWEL 348 (352)
Q Consensus 283 ~s~~~d~--~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~D---g~i~iw~~ 348 (352)
++++.++ .+++|...... .. ...... ...+..++||||++.++++.+.. ..+.+|+.
T Consensus 396 ~~~~~~~~~~~~l~~~~~~g----~~----~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 396 FRAGIESARESQIYAVPLQG----GQ----PQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp EEECSSCTTCBEEEEEETTC----CC----CEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred EEEeCCCCceEEEEEEEcCC----CC----eeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 4555555 78888654211 10 111222 45688999999998766665544 35777765
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=3.4e-19 Score=179.06 Aligned_cols=279 Identities=10% Similarity=0.062 Sum_probs=198.3
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 94 (352)
..+.+|...+.++.|+|+ .++++++.|++++||........ ...+ ..|. .+...+|+|||+.|+.+ .
T Consensus 197 ~~l~~~~~~v~~~~~s~d-------~l~~~~~~dg~~~l~~~~~~g~~---~~~l-~~~~-~~~~~~~SpDG~~la~~-~ 263 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-------RIYFITDIDGFGQIYSTDLDGKD---LRKH-TSFT-DYYPRHLNTDGRRILFS-K 263 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-------EEEEEECTTSSCEEEEEETTSCS---CEEC-CCCC-SSCEEEEEESSSCEEEE-E
T ss_pred EECcCCCCcccceEEeCC-------EEEEEEeccCceEEEEEeCCCCc---ceEe-cCCC-CcceeeEcCCCCEEEEE-e
Confidence 455789999999999985 46778888999999986532211 1111 1122 45677999999999887 4
Q ss_pred CCcEEEEEccCCceeeeEeecc-----------ccCCeeEEEEC-CCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecC
Q 018675 95 DATTCIWEDVGGDYECVATLEG-----------HENEVKSVSWN-ASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH 162 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~~-----------h~~~v~~v~~~-~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h 162 (352)
++.+.+|+..... +..+.+ |...+.+++|+ |+|+.|++++ ++.+.+|++..+. ...+..|
T Consensus 264 ~~~i~~~d~~~~~---l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~----~~~~~~~ 335 (1045)
T 1k32_A 264 GGSIYIFNPDTEK---IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY----VLKVPEP 335 (1045)
T ss_dssp TTEEEEECTTTCC---EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB----EEECSCC
T ss_pred CCEEEEecCCceE---eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc----eEEccCC
Confidence 8899999874332 223333 34578999999 9999988887 7889999986543 2234556
Q ss_pred cc-CeeEEEEcCCCCEEEEEeCCCcEE-EEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEE
Q 018675 163 AQ-DVKMVQWHPTMDVLFSCSYDNTIK-VWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240 (352)
Q Consensus 163 ~~-~v~~~~~~~~~~~l~s~~~d~~i~-iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~i 240 (352)
.. .+..+.|+ +++.++.++.+..+. +|+..... ...+ . +|...+..++|+|+|++|++++.++.|++
T Consensus 336 ~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~------~~~l---~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~ 404 (1045)
T 1k32_A 336 LRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK------AEKF---E-ENLGNVFAMGVDRNGKFAVVANDRFEIMT 404 (1045)
T ss_dssp SCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC------EEEC---C-CCCCSEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC------ceEe---c-CCccceeeeEECCCCCEEEEECCCCeEEE
Confidence 66 78899999 999999988877777 77764321 1122 1 56678999999999999999999999999
Q ss_pred EcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCC----------CeEEEEEccCCccccCcccce
Q 018675 241 WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAAD----------DSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d----------~~v~~~~~~~~~~~~~~~~~~ 309 (352)
||+...+. ..+...+...+..+.|+|++ +++.++.+ +.+++|+.... .
T Consensus 405 ~d~~tg~~------------~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g---------~ 463 (1045)
T 1k32_A 405 VDLETGKP------------TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR---------K 463 (1045)
T ss_dssp EETTTCCE------------EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT---------E
T ss_pred EECCCCce------------EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC---------c
Confidence 99753221 11111355667788999987 46665543 38889965431 1
Q ss_pred eeecccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 310 LLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
......|...+..++|+|+|+. |+.++.++..++|+.
T Consensus 464 -~~~l~~~~~~~~~~~~spdG~~-l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 464 -IFAATTENSHDYAPAFDADSKN-LYYLSYRSLDPSPDR 500 (1045)
T ss_dssp -EEECSCSSSBEEEEEECTTSCE-EEEEESCCCCCEECS
T ss_pred -EEEeeCCCcccCCceEcCCCCE-EEEEecccCCcCcch
Confidence 2234567778899999999975 567777877777764
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=2.9e-18 Score=172.35 Aligned_cols=286 Identities=10% Similarity=0.023 Sum_probs=196.2
Q ss_pred CccceEEEEEc-cCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceec-ceEEEEECCCCCEEEEEeCCCc
Q 018675 20 HTDRVWSLAWK-PTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR-TVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 20 H~~~V~~i~~~-p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
|...|.+++|+ |+ ++.+++++ ++.+.+|+...+.. .. + ..|.. .+..++|+ ||+.|+.++.+..
T Consensus 294 ~~~~v~~~~~S~pd------G~~la~~~-~~~i~~~~~~~~~~----~~-~-~~~~~~~~~~~~~s-dg~~l~~~s~~~~ 359 (1045)
T 1k32_A 294 SIPSKFAEDFSPLD------GDLIAFVS-RGQAFIQDVSGTYV----LK-V-PEPLRIRYVRRGGD-TKVAFIHGTREGD 359 (1045)
T ss_dssp ECGGGGEEEEEECG------GGCEEEEE-TTEEEEECTTSSBE----EE-C-SCCSCEEEEEECSS-SEEEEEEEETTEE
T ss_pred cccccceeeecCCC------CCEEEEEE-cCEEEEEcCCCCce----EE-c-cCCCcceEEeeeEc-CCCeEEEEECCCc
Confidence 55679999999 87 57788877 88999999876532 11 1 23555 78999999 9999999998877
Q ss_pred EE-EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 98 TC-IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 98 i~-i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
+. +|+..++.. ..+.+|...+..++|+|+|++|++++.++.|++||+..+.. .....+|...+..++|+|+++
T Consensus 360 l~~~~d~~~~~~---~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~---~~~~~~~~~~v~~~~~SpDG~ 433 (1045)
T 1k32_A 360 FLGIYDYRTGKA---EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP---TVIERSREAMITDFTISDNSR 433 (1045)
T ss_dssp EEEEEETTTCCE---EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---EEEEECSSSCCCCEEECTTSC
T ss_pred eEEEEECCCCCc---eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce---EEeccCCCCCccceEECCCCC
Confidence 87 888766543 23347778899999999999999999999999999976542 334457888889999999999
Q ss_pred EEEEEeCCC----------cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 177 VLFSCSYDN----------TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 177 ~l~s~~~d~----------~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
+|++++.++ .|++|++... . ...+ ..|...+.++.|+|+|++|+.++.++..++|+....
T Consensus 434 ~la~~~~~~~~~~~~~~~~~i~l~d~~~g-----~-~~~l----~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 434 FIAYGFPLKHGETDGYVMQAIHVYDMEGR-----K-IFAA----TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEETTTT-----E-EEEC----SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred eEEEEecCccccccCCCCCeEEEEECCCC-----c-EEEe----eCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 998887654 8999987542 1 2222 246677889999999999999998888888864321
Q ss_pred ccccC------------CC-------------------Ccc-ceeeEEeecccCcceEEEEecCCce-EEe---------
Q 018675 247 RMQSG------------DG-------------------YAS-WRHLCTISGYHDRTIFSVHWSREGI-IAS--------- 284 (352)
Q Consensus 247 ~~~~~------------~~-------------------~~~-~~~~~~~~~~~~~~i~~~~~~~~~~-~~s--------- 284 (352)
..... .. ... ......+ ..+...+..+.+++++. +++
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l-~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~ 582 (1045)
T 1k32_A 504 NFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPI-NVDPGDYRMIIPLESSILIYSVPVHGEFAA 582 (1045)
T ss_dssp CEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEEC-SCCCBCEEEEEECSSEEEEEECCCCCSHHH
T ss_pred ccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEc-CCCCCChhheEEcCCCeEEEEecccCcccc
Confidence 11000 00 000 0011111 12345677888888874 443
Q ss_pred --cCC--CCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 285 --GAA--DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 285 --~~~--d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.+. ...+..|+..... ... .. ..+..++|||||+. |++++.| .|++|++...
T Consensus 583 ~~~~~~~~~~l~~~d~~~~~------~~~----l~---~~v~~~~~S~DG~~-l~~~~~~-~i~~~d~~~~ 638 (1045)
T 1k32_A 583 YYQGAPEKGVLLKYDVKTRK------VTE----VK---NNLTDLRLSADRKT-VMVRKDD-GKIYTFPLEK 638 (1045)
T ss_dssp HHHCCCCCEEEEEEETTTCC------EEE----EE---EEEEEEEECTTSCE-EEEEETT-SCEEEEESSC
T ss_pred cccccCCCceEEEEECCCCc------EEE----ee---cCcceEEECCCCCE-EEEEcCC-cEEEEeCccC
Confidence 122 3345555443211 111 11 45889999999986 5566655 7999998653
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=4.1e-18 Score=164.41 Aligned_cols=275 Identities=12% Similarity=0.158 Sum_probs=172.3
Q ss_pred cEEEEeeCCCeEEEEecCCCcee-eeeeee--e----------ecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q 018675 40 PVFASCSGDKTVRIWEQSASSRF-WNCKAV--L----------EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGG 106 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~-~~~~~~--~----------~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~ 106 (352)
..+++++.|+ | +||..+++.. ...... . ...+...|.+++|+|| +.++.+ .++.+.+||..++
T Consensus 36 ~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~ 111 (706)
T 2z3z_A 36 DNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR 111 (706)
T ss_dssp TEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT
T ss_pred CeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEECCCC
Confidence 3577778888 8 9998876431 111000 0 0001146999999999 665555 4599999998776
Q ss_pred ceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC-----CCeeEEEEEeecCccC--------------ee
Q 018675 107 DYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP-----GNEFECVSVLQGHAQD--------------VK 167 (352)
Q Consensus 107 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~-----~~~~~~~~~~~~h~~~--------------v~ 167 (352)
+. ..+..+...+.+++|+|+|+.|+.+ .|+.|.+||+.. +... .....+... +.
T Consensus 112 ~~---~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~---~~~~~~~~~~~~g~~~~~ee~~~~~ 184 (706)
T 2z3z_A 112 KV---TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI---AVTIDGTETLVYGQAVHQREFGIEK 184 (706)
T ss_dssp EE---EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE---ESCSCCBTTEEESSCCGGGCTTCCC
T ss_pred ce---EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE---EeccCCCCCeEcccchhhhhcCCCc
Confidence 43 2334466788999999999999885 679999999876 4322 222222222 47
Q ss_pred EEEEcCCCCEEEEEe---------------------------------CCCcEEEEecCCCCCCCceeEeeeeccCCCCc
Q 018675 168 MVQWHPTMDVLFSCS---------------------------------YDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214 (352)
Q Consensus 168 ~~~~~~~~~~l~s~~---------------------------------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~ 214 (352)
++.|+|+++.|++++ .+..|.+|++.... . ..+. ....|.
T Consensus 185 ~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~-----~-~~~~-~~~~~~ 257 (706)
T 2z3z_A 185 GTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK-----T-VYLQ-TGEPKE 257 (706)
T ss_dssp SEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE-----E-EECC-CCSCTT
T ss_pred eEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc-----e-Eeec-cCCCCc
Confidence 899999999999887 34678888875431 1 1111 112466
Q ss_pred ccEEEEEEcCCCCEEEEEeCCC-----cEEEEcCCccccccCCCCccceeeEEeec-ccCcceEEEEecC--Cc-eEEec
Q 018675 215 STIWALSFNAKGDKLVSCSDDL-----TIKIWGADITRMQSGDGYASWRHLCTISG-YHDRTIFSVHWSR--EG-IIASG 285 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~--~~-~~~s~ 285 (352)
..+.+++|+|+|++|++++.++ .|++||+...+. ......... .....+..+.|++ ++ +++++
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~--------~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~ 329 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF--------VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQS 329 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE--------EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEE
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce--------eeEEEEccCCCeECccCCceeecCCCCEEEEEE
Confidence 7899999999999999887765 899998753210 011110000 0011234567887 76 66777
Q ss_pred CCCCeEEEEEccCCccccCcccceeeecccccCcceeE-EEecCCCcceEEEecCCC----eEEEEee
Q 018675 286 AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS-VQWSPGERRLLASASDDG----MIKIWEL 348 (352)
Q Consensus 286 ~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~sp~~~~~l~s~~~Dg----~i~iw~~ 348 (352)
..++.+++|..... + ........|...+.. ++|+|+++.++++++.++ .|..|++
T Consensus 330 ~~~g~~~l~~~~~~----~----~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 330 RRDGWNHLYLYDTT----G----RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CTTSSCEEEEEETT----S----CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred ccCCccEEEEEECC----C----CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 78888888865311 1 112234456777877 799999987777777776 4555554
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=7.2e-17 Score=142.14 Aligned_cols=259 Identities=11% Similarity=0.111 Sum_probs=164.2
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeC--CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe-CC
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSG--DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS-FD 95 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~--D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~d 95 (352)
.+.....+++|+|+ +++++++.. ++.|.+|++.++.. +..... ..+...+..++|+|+|++|++++ .+
T Consensus 37 ~~~~~p~~~a~spd------g~l~~~~~~~~~~~v~~~~~~~g~~--~~~~~~-~~~~~~p~~~a~spdg~~l~~~~~~~ 107 (347)
T 3hfq_A 37 AATQNPTYLALSAK------DCLYSVDKEDDEGGIAAWQIDGQTA--HKLNTV-VAPGTPPAYVAVDEARQLVYSANYHK 107 (347)
T ss_dssp EECSCCCCEEECTT------CEEEEEEEETTEEEEEEEEEETTEE--EEEEEE-EEESCCCSEEEEETTTTEEEEEETTT
T ss_pred eccCCcceEEEccC------CeEEEEEecCCCceEEEEEecCCcE--EEeeee-ecCCCCCEEEEECCCCCEEEEEeCCC
Confidence 45567778999996 454444432 68999999965431 111111 22456788999999999888887 67
Q ss_pred CcEEEEEcc-CCceeeeEeecc---------ccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecC-cc
Q 018675 96 ATTCIWEDV-GGDYECVATLEG---------HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH-AQ 164 (352)
Q Consensus 96 ~~i~i~~~~-~~~~~~~~~~~~---------h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h-~~ 164 (352)
+.+.+|+.. ++....+..+.. +...+.+++|+|+++++++...++.|.+|++...........+..+ ..
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 899999974 333333333321 1224888999999997777677889999999733333333322222 23
Q ss_pred CeeEEEEcCCCCEEEE-EeCCCcEEEEecCCCCCCCceeEeeeeccCCC--CcccEEEEEEcCCCCEE-EEEeCCCcEEE
Q 018675 165 DVKMVQWHPTMDVLFS-CSYDNTIKVWWAEDTDSDNWHCVQTISESNNG--HSSTIWALSFNAKGDKL-VSCSDDLTIKI 240 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~--h~~~i~~l~~~~~~~~l-~s~~~dg~i~i 240 (352)
....++|+|+++++++ ...++.+.+|++... .........+.....+ ....+..++|+|+|++| ++...++.|.+
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v 266 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAV 266 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEE
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEE
Confidence 5678999999996655 456889999986531 1122222222211111 12458899999999977 56667899999
Q ss_pred EcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecC-CCCeEEEEEc
Q 018675 241 WGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGA-ADDSVQFFVE 296 (352)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~-~d~~v~~~~~ 296 (352)
|+++... .......+. .+...+..+++++++ ++++++ .++.+.+|..
T Consensus 267 ~~~~~~g--------~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 267 FAVTADG--------HLTLIQQIS-TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEECGGG--------CEEEEEEEE-CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEECCCC--------cEEEeEEEe-cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 9875211 112222222 223456788999987 455554 4588999954
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=1.5e-17 Score=145.36 Aligned_cols=267 Identities=11% Similarity=0.069 Sum_probs=170.4
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceec-ceEEEEECCCCCEE-EEEeCCCcEEEEEccCCceeeeEeecc-
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR-TVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEG- 116 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l-~s~~~d~~i~i~~~~~~~~~~~~~~~~- 116 (352)
+++++++.|++|.+||..+++.... +...+.. .+..++|+|+|+.+ +++..++.|.+||..+++.........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~----~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKV----ITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEE----EECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEE----EEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 4789999999999999987643221 2111111 47889999999765 555667899999987765322222211
Q ss_pred --ccCCeeEEEECCCCcEEEEee------------CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe
Q 018675 117 --HENEVKSVSWNASGTLLATCG------------RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 117 --h~~~v~~v~~~~~~~~l~s~~------------~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
|...+..++|+|+++++++++ .++.|.+||+..+.. +..+.. ...+..+.|+|+++.++++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~---~~~~~~-~~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR---RKAFEA-PRQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE---EEEEEC-CSSCCCEEECTTSSCEEEE-
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE---EEEEeC-CCCcceeEECCCCCEEEEe-
Confidence 123678899999999888876 579999999865432 233332 3457788999999988777
Q ss_pred CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC-C-----------------------cE
Q 018675 183 YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD-L-----------------------TI 238 (352)
Q Consensus 183 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d-g-----------------------~i 238 (352)
++.|.+|+.... .....+... .+..+ +.|+|++.+++..+.+ + .|
T Consensus 153 -~~~i~~~d~~~~-----~~~~~~~~~--~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 153 -GRDLHVMDPEAG-----TLVEDKPIQ--SWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp -SSSEEEEETTTT-----EEEEEECST--TTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred -CCeEEEEECCCC-----cEeeeeecc--ccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 688999987543 222222211 11122 3678998876554433 2 35
Q ss_pred EEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeeccccc
Q 018675 239 KIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH 317 (352)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h 317 (352)
.+||+...+. . ...+ ..+...+..+.+++++ +++++ ++.+.+|+..... .+.... .
T Consensus 222 ~~~d~~~~~~---------~-~~~~-~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~---------~~~~~~-~ 278 (337)
T 1pby_B 222 LTMDLETGEM---------A-MREV-RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA---------SIKRVP-L 278 (337)
T ss_dssp EEEETTTCCE---------E-EEEE-EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE---------EEEEEE-C
T ss_pred EEEeCCCCCc---------e-Eeec-CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc---------Ccceec-C
Confidence 6777643211 0 1111 1233457788999987 45544 7899999764321 111111 2
Q ss_pred CcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 318 DMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 318 ~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
...+.+++|+|+++.++ +++.|+.|++||+..
T Consensus 279 ~~~~~~~~~s~dg~~l~-~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 279 PHSYYSVNVSTDGSTVW-LGGALGDLAAYDAET 310 (337)
T ss_dssp SSCCCEEEECTTSCEEE-EESBSSEEEEEETTT
T ss_pred CCceeeEEECCCCCEEE-EEcCCCcEEEEECcC
Confidence 24578999999997554 567899999999864
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=4.2e-18 Score=164.73 Aligned_cols=290 Identities=13% Similarity=0.126 Sum_probs=175.4
Q ss_pred eeecCCcc---ceEEEEEccCCCCCCCccEEEEeeCC---------CeEEEEecCCCceeeeeeeeeecceecceEEEEE
Q 018675 15 QTLEGHTD---RVWSLAWKPTAGVDGVAPVFASCSGD---------KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAW 82 (352)
Q Consensus 15 ~~~~gH~~---~V~~i~~~p~~~~~~~~~~l~s~s~D---------~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 82 (352)
..+.+|.. .|.+++|+|+ +++|++++.| +.+.+|++.++.. .... ....|...+..++|
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpD------g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~--~~~~~~~~~~~~~~ 121 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPD------REYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLD--PPEVSNAKLQYAGW 121 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTT------SSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECC--CTTCCSCCCSBCCB
T ss_pred EEeccccccccccceEEECCC------CCEEEEEecCccceeecceeeEEEEECCCCce-Eecc--CCccccccccccEE
Confidence 34455654 4999999997 5789998875 7888999987642 1111 11224445888999
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCC------------------eeEEEECCCCcEEEEeeCCC----
Q 018675 83 SPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE------------------VKSVSWNASGTLLATCGRDK---- 140 (352)
Q Consensus 83 s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~------------------v~~v~~~~~~~~l~s~~~d~---- 140 (352)
||||+.||.++. +.|.+|+..+++...+ ...+... +.++.|+|+|+.|++++.|+
T Consensus 122 SPdG~~la~~~~-~~i~~~~~~~g~~~~~--~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~ 198 (723)
T 1xfd_A 122 GPKGQQLIFIFE-NNIYYCAHVGKQAIRV--VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVP 198 (723)
T ss_dssp CSSTTCEEEEET-TEEEEESSSSSCCEEE--ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSC
T ss_pred CCCCCEEEEEEC-CeEEEEECCCCceEEE--ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccc
Confidence 999999999886 7899998877643322 2222322 37899999999999887653
Q ss_pred ------------------------------cEEEEecCCCCeeEEEEEeec------CccCeeEEEEcCCCCEEEEEeCC
Q 018675 141 ------------------------------SVWIWEVMPGNEFECVSVLQG------HAQDVKMVQWHPTMDVLFSCSYD 184 (352)
Q Consensus 141 ------------------------------~v~vwd~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~~~d 184 (352)
+|.+||+..+... ..+.. +...+..++|+|+++.+++.+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~---~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 275 (723)
T 1xfd_A 199 IMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD---LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNR 275 (723)
T ss_dssp EEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC---EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEET
T ss_pred eEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee---EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcC
Confidence 7889998655421 22232 24568899999999988766533
Q ss_pred ----CcEEEEecCCCCCCCceeEeeeeccCCCCcccE----EEEEEcCCCCEEEE--EeCCC------cEEEEc-CCccc
Q 018675 185 ----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTI----WALSFNAKGDKLVS--CSDDL------TIKIWG-ADITR 247 (352)
Q Consensus 185 ----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i----~~l~~~~~~~~l~s--~~~dg------~i~iwd-~~~~~ 247 (352)
..|.+|++.... +...+.. .+...+ ..+.|+|+|+.|+. +..++ .|.+|| .....
T Consensus 276 ~~~~~~i~~~d~~~g~-----~~~~~~~---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 276 AQNVSILTLCDATTGV-----CTKKHED---ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp TSCEEEEEEEETTTCC-----EEEEEEE---ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred CCCeEEEEEEeCCCCc-----ceEEEEe---ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 478889865432 1111111 112222 26799999997764 45677 455565 22111
Q ss_pred cccCCCCccceeeEEeecccCcceE-EEEecCCc-eEE-ecCCC--CeEEEEEccCCccccCcccceeeecccccCccee
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIF-SVHWSREG-IIA-SGAAD--DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVN 322 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~-~~~-s~~~d--~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 322 (352)
... .+ .+... ...+. .+.|++++ .++ ++..+ +.+++|....... ..... +.....|...+.
T Consensus 348 ~~~------~~---~l~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~---~~~~~-l~~~~~~~~~~~ 413 (723)
T 1xfd_A 348 NDN------IQ---SITSG-DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN---FNRQC-LSCDLVENCTYF 413 (723)
T ss_dssp SCC------CC---BSCCS-SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT---CCCBC-SSTTSSSSCCCC
T ss_pred ccc------ee---EeecC-CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC---CCcce-ecccccCCCCeE
Confidence 000 00 01111 11233 35788876 444 44444 7788886542110 00011 111112667789
Q ss_pred EEEecCCCcceEEEecCCC
Q 018675 323 SVQWSPGERRLLASASDDG 341 (352)
Q Consensus 323 ~~~~sp~~~~~l~s~~~Dg 341 (352)
.++|+|+++.++++.+.+.
T Consensus 414 ~~~~spdg~~l~~~~~~~~ 432 (723)
T 1xfd_A 414 SASFSHSMDFFLLKCEGPG 432 (723)
T ss_dssp EEEECTTSSEEEEECCSSS
T ss_pred EEEECCCCCEEEEEccCCC
Confidence 9999999987776665554
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=7.1e-18 Score=159.17 Aligned_cols=268 Identities=8% Similarity=0.017 Sum_probs=173.7
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeC-CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC---C
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSG-DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF---D 95 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~-D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d 95 (352)
+...|++++|+|+ ++.||+++. |++++||++.++.. .... ..+...+..++|+|| +++++++. +
T Consensus 20 ~~~~~~~~~~~~D------G~~la~~s~~~g~~~lw~~~~g~~----~~lt-~~~~~~~~~~~~spd-~~l~~~~~~~g~ 87 (582)
T 3o4h_A 20 IAVEKYSLQGVVD------GDKLLVVGFSEGSVNAYLYDGGET----VKLN-REPINSVLDPHYGVG-RVILVRDVSKGA 87 (582)
T ss_dssp HHSCEEEEEEEET------TTEEEEEEEETTEEEEEEEETTEE----EECC-SSCCSEECEECTTCS-EEEEEEECSTTS
T ss_pred hccchheeecCCC------CCeEEEEEccCCceeEEEEcCCCc----Eeee-cccccccccccCCCC-eEEEEeccCCCC
Confidence 3568999999997 578998887 99999999855421 2211 223357899999999 77777775 4
Q ss_pred CcEEEEEccC--CceeeeEeeccccCCeeEEEECCCCc--EEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEE
Q 018675 96 ATTCIWEDVG--GDYECVATLEGHENEVKSVSWNASGT--LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQW 171 (352)
Q Consensus 96 ~~i~i~~~~~--~~~~~~~~~~~h~~~v~~v~~~~~~~--~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~ 171 (352)
....+|.... .... . .+.. ...+...+|+|+++ .+++++.|+ +.+||+..+.. .... .+.. .++.|
T Consensus 88 ~~~~l~~~~~~~~g~~-~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~---~~l~-~~~~--~~~~~ 157 (582)
T 3o4h_A 88 EQHALFKVNTSRPGEE-Q-RLEA-VKPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGL---RELA-RLPG--FGFVS 157 (582)
T ss_dssp CCEEEEEEETTSTTCC-E-ECTT-SCSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEE---EEEE-EESS--CEEEE
T ss_pred cceEEEEEeccCCCcc-c-cccC-CCCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcE---EEee-cCCC--ceEEE
Confidence 5667775433 2111 1 2222 22344667788775 444555544 55999865532 1222 2222 78899
Q ss_pred cCCCCEEEEEeCC----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC--cEEEEcCCc
Q 018675 172 HPTMDVLFSCSYD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL--TIKIWGADI 245 (352)
Q Consensus 172 ~~~~~~l~s~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg--~i~iwd~~~ 245 (352)
+|+++.+++++.+ +.|.+|++..... ..+ ..|...+.+++|+|||+.|+++..++ .|++||++.
T Consensus 158 spDG~~la~~~~~~~~~~~i~~~d~~~g~~------~~l----~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGGRVSLFTSNLSSGGL------RVF----DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEETTTCCC------EEE----CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred CCCCCEEEEEEEcCCCCeEEEEEcCCCCCc------eEe----ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 9999999988877 6789998654321 122 24667789999999999999888888 899998754
Q ss_pred cccccCCCCccceeeEEeecccCcceE--------EEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccc
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIF--------SVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA 316 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (352)
.... ....+...+. ...|++++ ++++++.++.+++|.. . .... .
T Consensus 228 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-g----------~~~~---~ 280 (582)
T 3o4h_A 228 GSVE-------------DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID-G----------ERVE---A 280 (582)
T ss_dssp CCEE-------------ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-T----------EEEC---C
T ss_pred CcEE-------------EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-C----------Ceec---c
Confidence 3221 1111222222 23388886 6678888999999965 1 1111 2
Q ss_pred cCcceeEEEecCCCcceEEEecCCCe---EEEEee
Q 018675 317 HDMDVNSVQWSPGERRLLASASDDGM---IKIWEL 348 (352)
Q Consensus 317 h~~~i~~~~~sp~~~~~l~s~~~Dg~---i~iw~~ 348 (352)
..+.|.+++|+ +++ ++++++.+.+ +.+|+.
T Consensus 281 ~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 281 PQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp CSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETT
T ss_pred CCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcC
Confidence 33568899999 776 5667776654 455543
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=5.4e-17 Score=144.15 Aligned_cols=211 Identities=12% Similarity=0.138 Sum_probs=134.9
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecC-CCceeeeeeeeeecceecceEEEEECCCCCE--EEEEe---
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQS-ASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL--LATAS--- 93 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~-~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~--l~s~~--- 93 (352)
+...+..++|+|+ +++|++++.+ .+.+|++. +++.. . .......+...+++|+|+|+. ++++.
T Consensus 38 ~~~~~~~~a~spd------g~~l~~~~~~-~v~~~~~~~~g~~~-~---~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~ 106 (365)
T 1jof_A 38 QDEPISWMTFDHE------RKNIYGAAMK-KWSSFAVKSPTEIV-H---EASHPIGGHPRANDADTNTRAIFLLAAKQPP 106 (365)
T ss_dssp TTCCCSEEEECTT------SSEEEEEEBT-EEEEEEEEETTEEE-E---EEEEECCSSGGGGCTTSCCEEEEEEECSSTT
T ss_pred CCCCCcEEEECCC------CCEEEEEccc-eEEEEEECCCCCEE-E---eeEeecCCCCccEEECCCCCEEEEEEecCCc
Confidence 4456788999997 5788888888 99999986 44321 1 111000123456889999994 44543
Q ss_pred ----------CCCcEEEEEccC-Cceee-eEeec-cccCCeeEEEECCCCcEEEEee-CCCcEEEEecC-CCCeeEEEEE
Q 018675 94 ----------FDATTCIWEDVG-GDYEC-VATLE-GHENEVKSVSWNASGTLLATCG-RDKSVWIWEVM-PGNEFECVSV 158 (352)
Q Consensus 94 ----------~d~~i~i~~~~~-~~~~~-~~~~~-~h~~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~-~~~~~~~~~~ 158 (352)
.++++.+|+... +.... +..+. .+...+.+++|+|+|++++++. .++.|.+|++. .+. ...+..
T Consensus 107 ~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~-~~~~~~ 185 (365)
T 1jof_A 107 YAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE-VELVGS 185 (365)
T ss_dssp CCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-EEEEEE
T ss_pred ceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC-EEEeee
Confidence 688999998753 43221 11111 2456789999999999887765 46799999986 343 222333
Q ss_pred ee--cCccCeeEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCce----eEeeeeccCCCCcc------cEEEEE-EcC
Q 018675 159 LQ--GHAQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWH----CVQTISESNNGHSS------TIWALS-FNA 224 (352)
Q Consensus 159 ~~--~h~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~----~~~~~~~~~~~h~~------~i~~l~-~~~ 224 (352)
+. .|...+..++|+|+++++++++. ++.+.+|+..... .... .+..+.....+|.. .+..++ |+|
T Consensus 186 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp 264 (365)
T 1jof_A 186 VDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT-HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF 264 (365)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT-CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT
T ss_pred EecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC-CcEEEccceEEcCCCCcCCcccccccccccccEEEECC
Confidence 33 23456889999999999888775 6889999764311 1111 11111111122332 588999 999
Q ss_pred CCCEEEEEeCC-C-----cEEEEcC
Q 018675 225 KGDKLVSCSDD-L-----TIKIWGA 243 (352)
Q Consensus 225 ~~~~l~s~~~d-g-----~i~iwd~ 243 (352)
+|++|+++..+ + .|++|++
T Consensus 265 dG~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 265 SGKYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp TSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred CCCEEEEECCCCCCCCCCeEEEEEE
Confidence 99988766543 2 7999975
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=3.4e-17 Score=143.86 Aligned_cols=263 Identities=8% Similarity=0.002 Sum_probs=160.8
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE-EEeCCCcEEEEEccCCceeeeEeec-c
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA-TASFDATTCIWEDVGGDYECVATLE-G 116 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~d~~i~i~~~~~~~~~~~~~~~-~ 116 (352)
+.++++++.|++|.+||..+++.... +.......+..++|+|+|+.++ ++..++.|.+||..+++. ...+. .
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~----~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~--~~~~~~~ 84 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKS----CVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN--TFHANLS 84 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEE----EECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEESC
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEE----EecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE--EEEEEcc
Confidence 57899999999999999987643221 1111112467899999998654 555789999999877643 22332 2
Q ss_pred c-----cCCeeEEEECCCCcEEEEeeCC------------CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 117 H-----ENEVKSVSWNASGTLLATCGRD------------KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 117 h-----~~~v~~v~~~~~~~~l~s~~~d------------~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
+ ...+..++|+|+++++++++.+ +.|.+||+..+.....+..+. +...+.+++|+|+++ ++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EE
Confidence 2 2337899999999999988865 899999986533222233333 334688899999999 55
Q ss_pred EEeCCCcEEEEecCCCCCCCceeEeeeeccCCC-------------------C-cccEEEEEEcCCCCE-----------
Q 018675 180 SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNG-------------------H-SSTIWALSFNAKGDK----------- 228 (352)
Q Consensus 180 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-------------------h-~~~i~~l~~~~~~~~----------- 228 (352)
+++. .|.+|+..... ....+.....+ + ......+.+++++..
T Consensus 163 ~~~~--~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGK-----YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp EESS--SEEEECTTTCC-----EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred EccC--cEEEEeCCCCc-----eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 5543 49999765421 12222111000 0 003345666655421
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC-Cc-eEEecCCCCeEEEEEccCCccccCcc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EG-IIASGAADDSVQFFVESKDDLIDGPS 306 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~s~~~d~~v~~~~~~~~~~~~~~~ 306 (352)
+.....++.+++|+.. .....+..+.+++ ++ +++++ ++.+.+|+.....
T Consensus 236 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~------ 286 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFA---------------------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK------ 286 (349)
T ss_dssp EEEETTTCCEEEEEEE---------------------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE------
T ss_pred EEEeccCCcEEecccc---------------------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe------
Confidence 1122334445544321 1234567788888 76 45444 8899999764321
Q ss_pred cceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 307 YKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 307 ~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+.... ....+.+++|+|+++.++ +++.++.|++||+..
T Consensus 287 ---~~~~~~-~~~~~~~~~~s~dg~~l~-~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 287 ---LIKAAN-LDHTYYCVAFDKKGDKLY-LGGTFNDLAVFNPDT 325 (349)
T ss_dssp ---EEEEEE-CSSCCCEEEECSSSSCEE-EESBSSEEEEEETTT
T ss_pred ---EEEEEc-CCCCccceEECCCCCEEE-EecCCCeEEEEeccc
Confidence 111111 223578999999987655 477889999999864
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.80 E-value=1.4e-15 Score=134.75 Aligned_cols=255 Identities=9% Similarity=0.064 Sum_probs=158.5
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCC----CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe-C
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGD----KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS-F 94 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D----~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~ 94 (352)
|......++|+|+ +++|++++.+ +.+.+|++............. ..+......+++ ++++|++++ .
T Consensus 48 ~~~~p~~l~~spd------g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~-~~~~~~p~~~~~--dg~~l~~~~~~ 118 (361)
T 3scy_A 48 EVANPSYLIPSAD------GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQ-KTMGADPCYLTT--NGKNIVTANYS 118 (361)
T ss_dssp ECSCCCSEEECTT------SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE-ECSSSCEEEEEE--CSSEEEEEETT
T ss_pred cCCCCceEEECCC------CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEe-ccCCCCcEEEEE--CCCEEEEEECC
Confidence 6677778899997 5788888876 799999886541111111111 112345566777 888777766 5
Q ss_pred CCcEEEEEccCCc-eeeeEe---ec--------cccCCeeEEEECCCCcEEEEee-CCCcEEEEecCCCCe------eEE
Q 018675 95 DATTCIWEDVGGD-YECVAT---LE--------GHENEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNE------FEC 155 (352)
Q Consensus 95 d~~i~i~~~~~~~-~~~~~~---~~--------~h~~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~------~~~ 155 (352)
++.+.+|+..... ...... .. .+...+.+++|+|++++++.++ .++.|.+|++..... ...
T Consensus 119 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~ 198 (361)
T 3scy_A 119 GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLT 198 (361)
T ss_dssp TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEE
T ss_pred CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceee
Confidence 7899999975322 111111 11 1123457899999999665554 588999999864431 211
Q ss_pred ----EEEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 156 ----VSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 156 ----~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
......+......++|+|+++++++++ .++.|.+|++... .......+. ....+......++|+|+|++|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g---~~~~~~~~~-~~~~~~~~~~~i~~spdg~~l~ 274 (361)
T 3scy_A 199 KGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG---MLDEIQTVA-ADTVNAQGSGDIHLSPDGKYLY 274 (361)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT---EEEEEEEEE-SCSSCCCCEEEEEECTTSSEEE
T ss_pred cccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC---ceEEeEEEe-cCCCCCCCcccEEECCCCCEEE
Confidence 111223344678899999999887777 5899999987532 122222222 1223445678999999999886
Q ss_pred EEeC--CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecC-CCCeEEEEEc
Q 018675 231 SCSD--DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGA-ADDSVQFFVE 296 (352)
Q Consensus 231 s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~-~d~~v~~~~~ 296 (352)
++.. ++.|.+|+++... ........+.. ...+..++|++++ ++++++ .++.+.+|..
T Consensus 275 v~~~~~~~~i~v~~~~~~~-------g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 275 ASNRLKADGVAIFKVDETN-------GTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp EEECSSSCEEEEEEECTTT-------CCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EECCCCCCEEEEEEEcCCC-------CcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 6655 4899999875210 01112222222 3456788999987 455554 6788999754
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=1e-17 Score=162.01 Aligned_cols=291 Identities=12% Similarity=0.122 Sum_probs=172.8
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceec---ceEEEEECCCCCEEEEEeC--------
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTR---TVRSCAWSPSGKLLATASF-------- 94 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~~~-------- 94 (352)
++.|+|+ +.++++ +.|++|++|+..+++. .... ..|.. .+.+++|||||+.|++++.
T Consensus 20 ~~~~s~d------g~~~~~-~~d~~i~~~~~~~g~~----~~~~-~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s 87 (719)
T 1z68_A 20 FPNWISG------QEYLHQ-SADNNIVLYNIETGQS----YTIL-SNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYS 87 (719)
T ss_dssp CCEESSS------SEEEEE-CTTSCEEEEESSSCCE----EEEE-CHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSC
T ss_pred ccEECCC------CeEEEE-cCCCCEEEEEcCCCcE----EEEE-ccccccccceeeEEECCCCCeEEEEecCceeEEee
Confidence 6789997 445554 5799999999987643 1222 22222 3899999999999998876
Q ss_pred -CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEE------EeecCcc---
Q 018675 95 -DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVS------VLQGHAQ--- 164 (352)
Q Consensus 95 -d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~------~~~~h~~--- 164 (352)
++.+.+||..+++......+ ...+..++|+|+|+.|+.+. |+.|++|++..+....... .+.++..
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 88 YTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp EEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred cceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 78999999877643100122 25688999999999998886 7899999986654321100 0112211
Q ss_pred ------CeeEEEEcCCCCEEEEEeCCC----------------------------------cEEEEecCCCCCCCceeEe
Q 018675 165 ------DVKMVQWHPTMDVLFSCSYDN----------------------------------TIKVWWAEDTDSDNWHCVQ 204 (352)
Q Consensus 165 ------~v~~~~~~~~~~~l~s~~~d~----------------------------------~i~iw~~~~~~~~~~~~~~ 204 (352)
....+.|+|+++.|++++.|. .|.+|++..........+.
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 243 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP 243 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC
T ss_pred eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc
Confidence 114799999999999887652 5667765432100000000
Q ss_pred eeeccCCCCcccEEEEEEcCCCCEEEEEeCC----CcEEEEc----CCccccccCCCCccceeeEEeecccCcceE----
Q 018675 205 TISESNNGHSSTIWALSFNAKGDKLVSCSDD----LTIKIWG----ADITRMQSGDGYASWRHLCTISGYHDRTIF---- 272 (352)
Q Consensus 205 ~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---- 272 (352)
......+|...+.+++|+||++++++.... ..|.+|| ....+... . .......+...+.
T Consensus 244 -~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~-----~---~~~~~~~~~~~~~~~~~ 314 (719)
T 1z68_A 244 -VPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK-----T---QEHIEESRTGWAGGFFV 314 (719)
T ss_dssp -CCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG-----G---GEEEEECSSSCSSSSSC
T ss_pred -CCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE-----E---EecccccCCceEccccC
Confidence 000112577789999999998877764432 2477777 43221110 0 0000001222222
Q ss_pred -EEEecCCce---EEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecC----CCeEE
Q 018675 273 -SVHWSREGI---IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD----DGMIK 344 (352)
Q Consensus 273 -~~~~~~~~~---~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~----Dg~i~ 344 (352)
.+.|++++. +++...++...+|..... .. . ......+...+..+.++ +++.+++++.. ++..+
T Consensus 315 ~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~---~~-~----~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~ 385 (719)
T 1z68_A 315 STPVFSYDAISYYKIFSDKDGYKHIHYIKDT---VE-N----AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRN 385 (719)
T ss_dssp CCCEECTTSSCEEEEEECTTSCEEEEEESSC---ST-T----CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBE
T ss_pred CccEECCCCCeEEEEEEccCCceEEEEEECC---CC-c----eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEE
Confidence 467788762 334555665555433211 01 1 11223455668887777 77777766665 58899
Q ss_pred EEeecc
Q 018675 345 IWELAN 350 (352)
Q Consensus 345 iw~~~~ 350 (352)
||.+..
T Consensus 386 l~~~~~ 391 (719)
T 1z68_A 386 IYRISI 391 (719)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 998753
No 156
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.78 E-value=2.2e-15 Score=131.54 Aligned_cols=254 Identities=8% Similarity=0.058 Sum_probs=158.3
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEe-eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASC-SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~-s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
..+..+...+ +++|+|+ +++++.+ ..++.|.+|+..++... .... ..+..+..+++|+|+|++++++.
T Consensus 34 ~~~~~~~~~~-~~~~s~d------g~~l~~~~~~~~~i~~~d~~~~~~~---~~~~-~~~~~~~~~~~~s~dg~~l~~~~ 102 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSD------CSNVVVTSDFCQTLVQIETQLEPPK---VVAI-QEGQSSMADVDITPDDQFAVTVT 102 (331)
T ss_dssp EEEECCCCEE-EEEECSS------SCEEEEEESTTCEEEEEECSSSSCE---EEEE-EECSSCCCCEEECTTSSEEEECC
T ss_pred eeEEccCCcc-eEEEcCC------CCEEEEEeCCCCeEEEEECCCCcee---EEec-ccCCCCccceEECCCCCEEEEec
Confidence 3344455666 9999997 3545444 45899999999876431 1111 22334444499999999998555
Q ss_pred CCC---cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEE-EEeeCCCc-EEEEecCCCCeeEEE-EEeecCccCee
Q 018675 94 FDA---TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLL-ATCGRDKS-VWIWEVMPGNEFECV-SVLQGHAQDVK 167 (352)
Q Consensus 94 ~d~---~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~-v~vwd~~~~~~~~~~-~~~~~h~~~v~ 167 (352)
.++ .+.+||..+++. +..+.. ...+.+++|+|+|+++ ++...++. +.+|++......... ...........
T Consensus 103 ~~~~~~~i~v~d~~~~~~--~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 179 (331)
T 3u4y_A 103 GLNHPFNMQSYSFLKNKF--ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPF 179 (331)
T ss_dssp CSSSSCEEEEEETTTTEE--EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEE
T ss_pred CCCCcccEEEEECCCCCe--EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCcc
Confidence 443 899999876643 334433 3457899999999854 45566688 999998654322111 11123344578
Q ss_pred EEEEcCCCCEEEEE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCCc
Q 018675 168 MVQWHPTMDVLFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGADI 245 (352)
Q Consensus 168 ~~~~~~~~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~~ 245 (352)
.+.|+|+++.++.+ ..++.|.+|+...... ......+. ....+..++|+|+|++++.+ ..++.|.+||...
T Consensus 180 ~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~--~~~~~~~~-----~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLIGNSIGILETQNPEN--ITLLNAVG-----TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEECSSTTS--CEEEEEEE-----CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCCCcc--cceeeecc-----CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 99999999966544 4688999998764321 11122332 22456789999999976544 4578899999764
Q ss_pred cccccCCCCccceeeEEeec---ccCc---ceEEEEecCCc-e-EEecCCCCeEEEEEccC
Q 018675 246 TRMQSGDGYASWRHLCTISG---YHDR---TIFSVHWSREG-I-IASGAADDSVQFFVESK 298 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~---~~~~---~i~~~~~~~~~-~-~~s~~~d~~v~~~~~~~ 298 (352)
.+.. ....+.. .... ....+++++++ + ++++..++.+.+|+...
T Consensus 253 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 253 GTLS---------FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp TEEE---------EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred Ccee---------eecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 3221 0111100 0011 12346888876 3 45666677999997654
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=5.4e-16 Score=138.53 Aligned_cols=293 Identities=11% Similarity=0.050 Sum_probs=175.9
Q ss_pred eeeeecCCccceEE-----EEEccCCCCCCCccEEEEeeC-CCe--EEEEecCCCceeeeeeeeeecceecceEEEEECC
Q 018675 13 EIQTLEGHTDRVWS-----LAWKPTAGVDGVAPVFASCSG-DKT--VRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP 84 (352)
Q Consensus 13 ~~~~~~gH~~~V~~-----i~~~p~~~~~~~~~~l~s~s~-D~~--v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 84 (352)
.+..+..|...... .+|+|+ ++.|+.++. |+. |.+|+..++.. .... ..+...+..+.|+|
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpD------g~~l~~~~~~~g~~~l~~~d~~~g~~----~~lt-~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRD------GSKLLFGGAFDGPWNYYLLDLNTQVA----TQLT-EGRGDNTFGGFLSP 90 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTT------SCEEEEEECTTSSCEEEEEETTTCEE----EECC-CSSCBCSSSCEECT
T ss_pred ceEEecCCcccccchhhcCccCCCC------CCEEEEEEcCCCCceEEEEeCCCCce----EEee-eCCCCCccceEEcC
Confidence 44566667666655 789997 567888777 774 66667766532 1211 22444445678999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEE--ECCCCcEEEEe----------------------eCCC
Q 018675 85 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS--WNASGTLLATC----------------------GRDK 140 (352)
Q Consensus 85 ~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~--~~~~~~~l~s~----------------------~~d~ 140 (352)
||+.|+.++.++.+.+||..+++...+. ..+...+.... ++|++.+++.. +.+.
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEENVVY--QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEE--ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeee--echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 9999999999999999998877644333 33344443333 48999988742 2456
Q ss_pred cEEEEecCCCCeeEEEEEeecCccCeeEEEEcC-CCCEEEEEeCC------CcEEEEecCCCCCCCceeEeeeeccCCCC
Q 018675 141 SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYD------NTIKVWWAEDTDSDNWHCVQTISESNNGH 213 (352)
Q Consensus 141 ~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~h 213 (352)
.|.+||+..+.. ..+..+...+..+.|+| ++..++..+.+ ..|.+++..... ...+.. ..
T Consensus 169 ~l~~~d~~~g~~----~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~------~~~l~~---~~ 235 (388)
T 3pe7_A 169 RLMRVDLKTGES----TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN------MRKVKT---HA 235 (388)
T ss_dssp EEEEEETTTCCE----EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC------CEESCC---CC
T ss_pred eEEEEECCCCce----EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc------eEEeee---CC
Confidence 799999876542 22334455688999999 99888777653 266666654321 111211 11
Q ss_pred -cccEEEEEEcCCCCEEEEEeC-CC----cEEEEcCCccccccCCCCccceeeEEeecc-c-CcceEEEEecCCc-eEE-
Q 018675 214 -SSTIWALSFNAKGDKLVSCSD-DL----TIKIWGADITRMQSGDGYASWRHLCTISGY-H-DRTIFSVHWSREG-IIA- 283 (352)
Q Consensus 214 -~~~i~~l~~~~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~-~~~- 283 (352)
...+..+.|+|+|+.|+..+. ++ .|.+||+...+. +.+..+... + ........|++++ .++
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~---------~~l~~~~~~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 236 EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN---------RQLTSMPACSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE---------EEEEEECCEEEEEECTTSSEEEEEECCC--
T ss_pred CCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce---------EEEEcCCCceeeeecCCCCeEccCCCccee
Confidence 135778899999997765443 22 399998764321 111111110 0 0000001355554 232
Q ss_pred ec--------CCCCeEEEEEccCCccccCcccceeeecccccCc-----------ceeEEEecCCCcceEEEecCCCeEE
Q 018675 284 SG--------AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM-----------DVNSVQWSPGERRLLASASDDGMIK 344 (352)
Q Consensus 284 s~--------~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~i~~~~~sp~~~~~l~s~~~Dg~i~ 344 (352)
+. ..+..+++|+...... . ....|.. .+.+++|+||++.++.++..+|...
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~------~----~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~ 376 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNMKNGTQ------H----RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPA 376 (388)
T ss_dssp ----------CCCCEEEEEETTTTEE------E----EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCE
T ss_pred EeeeccccccCCCCEEEEEeccCCce------E----EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCcee
Confidence 21 4456788886543211 1 1122322 5788999999988777777789888
Q ss_pred EEeecc
Q 018675 345 IWELAN 350 (352)
Q Consensus 345 iw~~~~ 350 (352)
||.+..
T Consensus 377 l~~~~l 382 (388)
T 3pe7_A 377 LYLATL 382 (388)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 887753
No 158
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=1.1e-15 Score=134.56 Aligned_cols=240 Identities=10% Similarity=0.095 Sum_probs=162.1
Q ss_pred ecceEEEEECCCCCEEEEEeC-------CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcE-EEEeeCCCcEEEE
Q 018675 74 TRTVRSCAWSPSGKLLATASF-------DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTL-LATCGRDKSVWIW 145 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~-------d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~v~vw 145 (352)
...+..++|+|+|+.+++++. ++.+.+||..+++. ...+. ....+..+.|+|+++. +++...++.|.+|
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV--TQAIH-NDLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE--EEEEE-ESSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE--EEEEe-cCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 456789999999998887774 46799999876643 33333 2345788999999985 4555667999999
Q ss_pred ecCCCCeeEEEEEeecCcc---------CeeEEEEcCCCCEEEEEe--CCCcEEEEecCCCCCCCceeEeeeeccCCCCc
Q 018675 146 EVMPGNEFECVSVLQGHAQ---------DVKMVQWHPTMDVLFSCS--YDNTIKVWWAEDTDSDNWHCVQTISESNNGHS 214 (352)
Q Consensus 146 d~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~ 214 (352)
|+..++.. ..+..+.. .+..+.|+|+++.+++++ .++.|.+|+.... .....+. .+.
T Consensus 117 d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~-----~~~~~~~----~~~ 184 (353)
T 3vgz_A 117 DAKTGEVK---GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI-----KLKTAIQ----NTG 184 (353)
T ss_dssp ETTTCCEE---EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT-----EEEEEEC----CCC
T ss_pred eCCCCeeE---EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC-----ceEEEec----CCC
Confidence 98766532 23332221 267899999999877665 4788999986532 2223322 133
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeec---ccCcceEEEEecCCc--eEEecCCCC
Q 018675 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG---YHDRTIFSVHWSREG--IIASGAADD 289 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~--~~~s~~~d~ 289 (352)
..+..+.|+|+++++++++.++.|.+||....+. ...+.. .+...+..+.+++++ .+++...++
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNADGELITIDTADNKI-----------LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 253 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE-----------EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS
T ss_pred CccceEEECCCCCEEEEEcCCCeEEEEECCCCeE-----------EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC
Confidence 4467889999999999999999999999753221 111111 123346678888865 344555568
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
.+.+|+...... +....... -..++|+|+++.++++...++.|.+||...
T Consensus 254 ~v~~~d~~~~~~---------~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 254 EVLVVDTRNGNI---------LAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp EEEEEETTTCCE---------EEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEEEEECCCCcE---------EEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 999997643221 11111111 257999999987888888899999999864
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=2.4e-17 Score=155.55 Aligned_cols=233 Identities=12% Similarity=0.140 Sum_probs=155.9
Q ss_pred ceecceEEEEECCCCCEEEEEeC-CCcEEEEEccCCceeeeEeecccc-CCeeEEEECCCCcEEEEeeC---CCcEEEEe
Q 018675 72 MHTRTVRSCAWSPSGKLLATASF-DATTCIWEDVGGDYECVATLEGHE-NEVKSVSWNASGTLLATCGR---DKSVWIWE 146 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s~~~-d~~i~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~---d~~v~vwd 146 (352)
.+..+|++++|+|||+.||+++. |+++.||+..+++. ..+..|. ..+..+.|+|+ +++++++. +....+|.
T Consensus 19 ~~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~---~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 19 LIAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET---VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE---EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred HhccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc---EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 34568999999999999999887 99999999765532 2334444 68999999999 77777765 45567766
Q ss_pred cCC--CCeeEEEEEeecCccCeeEEEEcCCCCE-EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc
Q 018675 147 VMP--GNEFECVSVLQGHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN 223 (352)
Q Consensus 147 ~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~ 223 (352)
+.. ..... .+.. .......+|+|+++. +++.+.++.+.+|++.... ...+.. +.. .++.|+
T Consensus 95 ~~~~~~g~~~---~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~------~~~l~~----~~~--~~~~~s 158 (582)
T 3o4h_A 95 VNTSRPGEEQ---RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG------LRELAR----LPG--FGFVSD 158 (582)
T ss_dssp EETTSTTCCE---ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE------EEEEEE----ESS--CEEEEE
T ss_pred EeccCCCccc---cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc------EEEeec----CCC--ceEEEC
Confidence 543 22211 1221 223446688888753 3344444555599765431 112211 111 688999
Q ss_pred CCCCEEEEEeCC----CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCC--eEEEEEc
Q 018675 224 AKGDKLVSCSDD----LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADD--SVQFFVE 296 (352)
Q Consensus 224 ~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~--~v~~~~~ 296 (352)
|||++|++++.+ +.|++||+..... + .+ ..+...+..+.|+|++ .++++..++ .+++|+.
T Consensus 159 pDG~~la~~~~~~~~~~~i~~~d~~~g~~---------~---~l-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGGRVSLFTSNLSSGGL---------R---VF-DSGEGSFSSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp EETTEEEEEEEEETTEEEEEEEETTTCCC---------E---EE-CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred CCCCEEEEEEEcCCCCeEEEEEcCCCCCc---------e---Ee-ecCCCccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 999999988877 7899998753221 1 11 1244567889999987 566666777 6777754
Q ss_pred cCCccccCcccceeeecccccCcceeEEE--------ecCCCcceEEEecCCCeEEEEee
Q 018675 297 SKDDLIDGPSYKMLLKKEKAHDMDVNSVQ--------WSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~--------~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.... .. ...+|...+..++ |+||+ .++++++.||+++||++
T Consensus 226 ~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 226 RDGS---------VE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp TTCC---------EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred CCCc---------EE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 3321 11 3346666777777 99999 68899999999999986
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=6.3e-17 Score=156.44 Aligned_cols=293 Identities=13% Similarity=0.137 Sum_probs=171.3
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeC---------CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSG---------DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~---------D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
.|.+++|+|+ +++|+.++. |+++++|++.+++... ...+ ...+..++|||||+.|+.+.
T Consensus 61 ~~~~~~~SpD------g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~--~~~l----~~~~~~~~~SPDG~~la~~~ 128 (719)
T 1z68_A 61 NASNYGLSPD------RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR--GNEL----PRPIQYLCWSPVGSKLAYVY 128 (719)
T ss_dssp TCSEEEECTT------SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--SSCC----CSSBCCEEECSSTTCEEEEE
T ss_pred ceeeEEECCC------CCeEEEEecCceeEEeecceEEEEEECCCCcccc--ceec----CcccccceECCCCCEEEEEE
Confidence 3899999997 578888876 7999999998764210 0111 24578899999999999886
Q ss_pred CCCcEEEEEccCCceeeeEeeccccCCe-----------------eEEEECCCCcEEEEeeCCC----------------
Q 018675 94 FDATTCIWEDVGGDYECVATLEGHENEV-----------------KSVSWNASGTLLATCGRDK---------------- 140 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v-----------------~~v~~~~~~~~l~s~~~d~---------------- 140 (352)
|+.|.+|+..+++...+ +..++...| .++.|+|+|+.|++++.|.
T Consensus 129 -~~~i~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~ 206 (719)
T 1z68_A 129 -QNNIYLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQY 206 (719)
T ss_dssp -TTEEEEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSS
T ss_pred -CCeEEEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 78999998876643221 122332222 5899999999999988652
Q ss_pred ------------------cEEEEecCCCCee--EEE---EEeecCccCeeEEEEcCCCCEEEEEeCCC----cEEEEe--
Q 018675 141 ------------------SVWIWEVMPGNEF--ECV---SVLQGHAQDVKMVQWHPTMDVLFSCSYDN----TIKVWW-- 191 (352)
Q Consensus 141 ------------------~v~vwd~~~~~~~--~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~d~----~i~iw~-- 191 (352)
+|++||+..+... ..+ ..+.+|...+..++|+|++.++++..... .|.+|+
T Consensus 207 ~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~ 286 (719)
T 1z68_A 207 PRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFR 286 (719)
T ss_dssp CEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEEC
T ss_pred ccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEccc
Confidence 7889998654321 011 11235677789999999987666643322 377777
Q ss_pred --cCCCCCCCceeEeeeeccCCCCcccEE-----EEEEcCCCCEEE--EEeCCCc--EEEEcCCccccccCCCCccceee
Q 018675 192 --AEDTDSDNWHCVQTISESNNGHSSTIW-----ALSFNAKGDKLV--SCSDDLT--IKIWGADITRMQSGDGYASWRHL 260 (352)
Q Consensus 192 --~~~~~~~~~~~~~~~~~~~~~h~~~i~-----~l~~~~~~~~l~--s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~ 260 (352)
..... +...+.....+|...+. .+.|+|+|+.++ ++..+|. |.+|++.....
T Consensus 287 ~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~------------ 349 (719)
T 1z68_A 287 EDWQTWD-----CPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA------------ 349 (719)
T ss_dssp SSSSSEE-----CCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC------------
T ss_pred CCCCCCc-----eEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce------------
Confidence 43221 11111000013444554 688999998554 4556665 44455432111
Q ss_pred EEeecccCcceEEEEecCCceEE-ecCC----CCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEE
Q 018675 261 CTISGYHDRTIFSVHWSREGIIA-SGAA----DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLA 335 (352)
Q Consensus 261 ~~~~~~~~~~i~~~~~~~~~~~~-s~~~----d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~ 335 (352)
..+.. ....+..+.+.+++.++ ++.. ++..++|......- ......+.....+|...+..++|+|+++.++.
T Consensus 350 ~~lt~-~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g--~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~ 426 (719)
T 1z68_A 350 IQITS-GKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSY--PPSKKCVTCHLRKERCQYYTASFSDYAKYYAL 426 (719)
T ss_dssp EECSC-SSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSS--SCCEEESSTTTTTTTBCBEEEEECGGGSSEEE
T ss_pred Eeccc-CceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCC--CCCceeccCccCCCCCceEEEEECCCCCEEEE
Confidence 01111 12223333323444444 4433 47778886532100 00011111112336677889999999887666
Q ss_pred EecCC--CeEEEEeec
Q 018675 336 SASDD--GMIKIWELA 349 (352)
Q Consensus 336 s~~~D--g~i~iw~~~ 349 (352)
+++.+ ..+.+|++.
T Consensus 427 ~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 427 VCYGPGIPISTLHDGR 442 (719)
T ss_dssp EECCBSSCEEEEECSS
T ss_pred EcCCCCCCeEEEEECC
Confidence 66555 467788764
No 161
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.72 E-value=4.5e-15 Score=129.52 Aligned_cols=239 Identities=10% Similarity=0.124 Sum_probs=155.4
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe---------
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS--------- 93 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~--------- 93 (352)
.+.+++|+|+. ..++++++.++.|.+|+..+++............|...+..++|+|+|+.|+++.
T Consensus 35 ~~~~~~~s~dg-----~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 109 (337)
T 1pby_B 35 TPMVPMVAPGG-----RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTH 109 (337)
T ss_dssp CCCCEEECTTS-----SEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSC
T ss_pred CccceEEcCCC-----CEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccc
Confidence 47889999973 2355677778999999998765432221100001233677899999999988886
Q ss_pred ---CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEE
Q 018675 94 ---FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 94 ---~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~ 170 (352)
.++.+.+||..+++. ...+.. ...+.++.|+|++++|+++ ++.|.+||+..+. ....+..+.. ...+.
T Consensus 110 ~~~~~~~i~v~d~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~---~~~~~~~~~~-~~~~~ 180 (337)
T 1pby_B 110 FEVQPTRVALYDAETLSR--RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGT---LVEDKPIQSW-EAETY 180 (337)
T ss_dssp EEECCCEEEEEETTTTEE--EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTE---EEEEECSTTT-TTTTB
T ss_pred ccccCceEEEEECCCCcE--EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCc---Eeeeeecccc-CCCce
Confidence 579999999876543 333332 4567889999999988777 6889999986553 2333332220 11236
Q ss_pred EcCCCCEEEEEeCCC------------------------cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC
Q 018675 171 WHPTMDVLFSCSYDN------------------------TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226 (352)
Q Consensus 171 ~~~~~~~l~s~~~d~------------------------~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~ 226 (352)
|+|++..++..+..+ .|.+|+...... . ...+ ..+...+.+++|+|++
T Consensus 181 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~-~~~~----~~~~~~~~~~~~s~dg 252 (337)
T 1pby_B 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM---A-MREV----RIMDVFYFSTAVNPAK 252 (337)
T ss_dssp CCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE---E-EEEE----EECSSCEEEEEECTTS
T ss_pred eCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc---e-Eeec----CCCCCceeeEEECCCC
Confidence 788887665444332 356777654321 1 1111 1344568889999999
Q ss_pred CEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccC
Q 018675 227 DKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESK 298 (352)
Q Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~ 298 (352)
++++++ ++.|.+||++..+ ....+. ....+..+.+++++ ++++++.++.+.+|+...
T Consensus 253 ~~l~~~--~~~v~~~d~~~~~-----------~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 253 TRAFGA--YNVLESFDLEKNA-----------SIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp SEEEEE--ESEEEEEETTTTE-----------EEEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred CEEEEe--CCeEEEEECCCCc-----------Ccceec--CCCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 998888 7999999975321 111221 12346778889876 566777899999997643
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.69 E-value=3.6e-15 Score=144.60 Aligned_cols=283 Identities=12% Similarity=0.164 Sum_probs=169.8
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeeccee-----cceEEEEECCCCCEEEEEeCC
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT-----RTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~s~~~~~l~s~~~d 95 (352)
.....++.|+|+ +++++++ |++|++|+..+++.. ..+ ..|. ......+|||||+.|+.++.+
T Consensus 16 ~~~~~~~~w~~d------g~~~~~~--~~~i~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 16 RLKLYSLRWISD------HEYLYKQ--ENNILVFNAEYGNSS----VFL-ENSTFDEFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCCCCCEEECSS------SEEEEEE--TTEEEEEETTTCCEE----EEE-CTTTTTTCCSCCCEEEECTTSSEEEEEEEE
T ss_pred cccccccEECCC------CcEEEEc--CCcEEEEECCCCceE----EEE-echhhhhhcccccceEECCCCCEEEEEECC
Confidence 345668999997 4678875 999999999877532 111 1122 123457899999999998876
Q ss_pred ---------CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc--
Q 018675 96 ---------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ-- 164 (352)
Q Consensus 96 ---------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~-- 164 (352)
+.+.+||..+++. ..+..|.+.+...+|||+|+.|+.++ |+.|.+|++..+.... + +..++..
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~-l-t~~g~~~~~ 156 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR-I-TWTGKEDII 156 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-C-CSCCBTTTE
T ss_pred eeeEEEccceEEEEEECCCCcE---EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE-E-cCCCCccce
Confidence 4566999887753 23556778899999999999998875 6889999986554221 1 1112221
Q ss_pred ---------------CeeEEEEcCCCCEEEEEeCCCc-EEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 165 ---------------DVKMVQWHPTMDVLFSCSYDNT-IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 165 ---------------~v~~~~~~~~~~~l~s~~~d~~-i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
....+.|+||++.|+.++.|.. +.+|++...... .++...+..+.|.+.|..
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~------------~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE------------SLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST------------TCSSCEEEEEECCBTTSC
T ss_pred ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC------------CCCCCcceeecCCCCcCc
Confidence 1234889999999998876554 778754321100 023455667778777643
Q ss_pred EEEEeCCCcEEEEcCCc---cccccCCCCccceeeEEeec-----ccCcceEEEEecCCce-EEec----CCCCeEEEEE
Q 018675 229 LVSCSDDLTIKIWGADI---TRMQSGDGYASWRHLCTISG-----YHDRTIFSVHWSREGI-IASG----AADDSVQFFV 295 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~-~~s~----~~d~~v~~~~ 295 (352)
.....|++||++. .... . ...+.. .+...+..+.|+|++. ++.. ..+..+.+|+
T Consensus 225 ----~~~~~l~v~d~~~~~~~~~~------~---~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d 291 (740)
T 4a5s_A 225 ----NPTVKFFVVNTDSLSSVTNA------T---SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICD 291 (740)
T ss_dssp ----CCEEEEEEEETTSCCSSSCC------C---EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEE
T ss_pred ----CCeeEEEEEECCCCCCCCcc------e---EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEE
Confidence 1223688898754 2100 0 001111 1445578889999885 3222 2233677776
Q ss_pred ccCCcccc-CcccceeeecccccCccee-----EEEecCCCcceEEEec-CCCe--EEEEeec
Q 018675 296 ESKDDLID-GPSYKMLLKKEKAHDMDVN-----SVQWSPGERRLLASAS-DDGM--IKIWELA 349 (352)
Q Consensus 296 ~~~~~~~~-~~~~~~~~~~~~~h~~~i~-----~~~~sp~~~~~l~s~~-~Dg~--i~iw~~~ 349 (352)
........ ......+. ..+|...|. ..+|+|||+.++...+ .+|. |.+|++.
T Consensus 292 ~~tg~~~~~~~~~~~l~--~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 292 YDESSGRWNCLVARQHI--EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp EETTTTEEEECGGGCEE--EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred CCCCccccceeEEEEee--eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 54322000 00001111 134555554 7899999986552444 4554 5566653
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.68 E-value=8.9e-14 Score=123.34 Aligned_cols=164 Identities=11% Similarity=0.053 Sum_probs=110.1
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEcc-CCceeeeEeeccccCCeeEEEECCCCcE--EEEee-------------C
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDV-GGDYECVATLEGHENEVKSVSWNASGTL--LATCG-------------R 138 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~-~~~~~~~~~~~~h~~~v~~v~~~~~~~~--l~s~~-------------~ 138 (352)
..+..++|+|+|++|++++.+ .+.+|+.. +++.........+ +.+..++|+|+|++ +++++ .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 357789999999999988888 99999975 5543222222111 34667899999994 45553 6
Q ss_pred CCcEEEEecCC-CCeeEEEEEee-cCccCeeEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 139 DKSVWIWEVMP-GNEFECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 139 d~~v~vwd~~~-~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
++++.+|++.. +.....+..+. .+...+.+++|+|++++++++.. ++.|.+|++.. .........+. ...|..
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~--~g~~~~~~~~~--~~~~g~ 193 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLA--SGEVELVGSVD--APDPGD 193 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT--TSCEEEEEEEE--CSSTTC
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECC--CCCEEEeeeEe--cCCCCC
Confidence 89999999864 33222222221 23456889999999998877664 67899998752 11121122221 112346
Q ss_pred cEEEEEEcCCCCEEEEEeC-CCcEEEEcCC
Q 018675 216 TIWALSFNAKGDKLVSCSD-DLTIKIWGAD 244 (352)
Q Consensus 216 ~i~~l~~~~~~~~l~s~~~-dg~i~iwd~~ 244 (352)
.+..++|+|+|+++++++. ++.|.+|+.+
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 6889999999999887764 7899999753
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=1.1e-14 Score=139.36 Aligned_cols=297 Identities=11% Similarity=0.015 Sum_probs=174.4
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEe--eCCCeEEEEecCCCceeeeeeeeeecceecceE---------EEEEC-
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASC--SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVR---------SCAWS- 83 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~--s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~s- 83 (352)
.+.+|...|.+++|+++ .-.+++. +.|+..+||....+... ... ..|...+. ...|+
T Consensus 18 ~~~~~~~~~~~~~~s~~------~~~~~~~~~~~~~~~~l~~~~~~~~~---~~l--~~~~~~~~~~~~~~~~~~~~~~~ 86 (662)
T 3azo_A 18 LVASRSGRPACVGAVGD------EVWWVAPRPAEAGRATLVRRRADGAE---ESA--LPAPWNVRNRVFEYSGFPWAGVP 86 (662)
T ss_dssp HHHHTCSCCEEEEEETT------EEEEEEEETTTTTEEEEEEECTTSCE---EES--SCTTCCBCCCGGGTCCCCEEEEC
T ss_pred HHhhcCCccceeEEcCC------eEEEEecCcccCCcEEEEEECCCCCc---cee--CCCCccccccccccCCccceeee
Confidence 46789999999999985 3466666 56889999986333221 111 11223333 44454
Q ss_pred -CCCCE-EEEEeC-CCcEEEEEcc--C-CceeeeEeecc-----ccCCeeEEEECCCCcEEEEeeCC----------CcE
Q 018675 84 -PSGKL-LATASF-DATTCIWEDV--G-GDYECVATLEG-----HENEVKSVSWNASGTLLATCGRD----------KSV 142 (352)
Q Consensus 84 -~~~~~-l~s~~~-d~~i~i~~~~--~-~~~~~~~~~~~-----h~~~v~~v~~~~~~~~l~s~~~d----------~~v 142 (352)
|||+. |+.++. +..|.+++.. + +.. ..+.. |...+..++|+|+|+.|+.++.| ..|
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i 163 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFL 163 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCCC---EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEE
Confidence 99998 776554 4455555543 2 322 23333 56678899999999999988877 589
Q ss_pred EEEecCCC-----CeeEEEEEee-cCccCeeEEEEcCCCCEEEEEeCCC--------cEEEEecCCCCCCCceeEeeeec
Q 018675 143 WIWEVMPG-----NEFECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSYDN--------TIKVWWAEDTDSDNWHCVQTISE 208 (352)
Q Consensus 143 ~vwd~~~~-----~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~--------~i~iw~~~~~~~~~~~~~~~~~~ 208 (352)
.+||+... ... ..+. .+...+..++|+|+++.|+.++.++ .|.+|++... ........+.
T Consensus 164 ~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~--g~~~~~~~l~- 237 (662)
T 3azo_A 164 AAVPLDGSAAADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTED--GRFADTRTLL- 237 (662)
T ss_dssp EEEETTSTTTTCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTT--SCEEEEEEEE-
T ss_pred EEEECCCCccccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCC--CcccccEEeC-
Confidence 99998651 221 2333 4455677889999999998777553 6888887521 1011112221
Q ss_pred cCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE--cCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEec
Q 018675 209 SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW--GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASG 285 (352)
Q Consensus 209 ~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~ 285 (352)
.+|...+..+.|+|+|++++++..++..+|| +....+......... .. ....-...+..+.+++++ +++++
T Consensus 238 --~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~--~~--~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 238 --GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREE--EF--AGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp --EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSS--BS--SCCCCSTTCCSEEECTTSCEEEEE
T ss_pred --CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccc--cc--cCccccccCceEeEeCCCEEEEEE
Confidence 1345678999999999988888888855555 432211110000000 00 000000013346666655 66666
Q ss_pred CCCCeEEEEEccCCccccCcccceeeecccccCcceeEE-EecCCCcceEEEecCCCeEEEEee
Q 018675 286 AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV-QWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 286 ~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~-~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
.. +..++|...... .. ......|...+..+ +++++ ..++++++.+....||.+
T Consensus 312 ~~-~~~~l~~~d~~~-------~~-~~~l~~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 312 GK-GAAVLGILDPES-------GE-LVDAAGPWTEWAATLTVSGT-RAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp BS-SSCEEEEEETTT-------TE-EEECCSSCCEEEEEEEEETT-EEEEEEEETTEEEEEEEE
T ss_pred Ec-CccEEEEEECCC-------Cc-EEEecCCCCeEEEEEecCCC-EEEEEEcCCCCCCEEEEE
Confidence 66 888888543110 01 22344566677777 66543 345566677766666654
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.67 E-value=7.3e-13 Score=113.15 Aligned_cols=246 Identities=14% Similarity=0.209 Sum_probs=164.5
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeee-eecceecceEEEEE-CCCCCEEEEEeC-
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV-LEEMHTRTVRSCAW-SPSGKLLATASF- 94 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~-~~~~h~~~v~~~~~-s~~~~~l~s~~~- 94 (352)
.+|.....++++.|+ +.++++.+.++.|.+|+... ......... ....+...+..+++ .++++++++...
T Consensus 26 ~g~~~~p~~v~~~~~------g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~ 98 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQ------NDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP 98 (286)
T ss_dssp TTCBSCEEEEEECTT------CCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG
T ss_pred CCccCCCceEEECCC------CCEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC
Confidence 356778999999986 46788888899999999763 222111100 00123356789999 578877777643
Q ss_pred CCcEEEEEccCCceeeeEeec-cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEee--cCccCeeEEEE
Q 018675 95 DATTCIWEDVGGDYECVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ--GHAQDVKMVQW 171 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~--~h~~~v~~~~~ 171 (352)
++.|.+|+. .++. ...+. .+...+..+++.++++++++...++.|.+||.. +.. +..+. .+...+..+++
T Consensus 99 ~~~i~~~d~-~g~~--~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~---~~~~~~~~~~~~p~~i~~ 171 (286)
T 1q7f_A 99 THQIQIYNQ-YGQF--VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNV---LHKFGCSKHLEFPNGVVV 171 (286)
T ss_dssp GCEEEEECT-TSCE--EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE---EEEEECTTTCSSEEEEEE
T ss_pred CCEEEEECC-CCcE--EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCE---EEEeCCCCccCCcEEEEE
Confidence 789999984 3332 23332 334578999999999988888888999999953 332 22222 34456789999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC-cEEEEcCCcccccc
Q 018675 172 HPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL-TIKIWGADITRMQS 250 (352)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~ 250 (352)
+|++.++++...++.|.+|+.... ....+. ..++...+..++++|+|.++++...++ .|.+|+.+..
T Consensus 172 ~~~g~l~v~~~~~~~i~~~~~~g~------~~~~~~--~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~---- 239 (286)
T 1q7f_A 172 NDKQEIFISDNRAHCVKVFNYEGQ------YLRQIG--GEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ---- 239 (286)
T ss_dssp CSSSEEEEEEGGGTEEEEEETTCC------EEEEES--CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC----
T ss_pred CCCCCEEEEECCCCEEEEEcCCCC------EEEEEc--cCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC----
Confidence 999987777778999999975321 122221 123335688999999999999888776 9999985321
Q ss_pred CCCCccceeeEEeec-ccCcceEEEEecCCceEEecCCCCeEEEEEcc
Q 018675 251 GDGYASWRHLCTISG-YHDRTIFSVHWSREGIIASGAADDSVQFFVES 297 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~ 297 (352)
....+.. .....+..+++++++.+..++.++.+++|...
T Consensus 240 --------~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 240 --------LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp --------EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred --------EEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 1111111 12234678888888755555678999999653
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=5.1e-13 Score=114.10 Aligned_cols=240 Identities=13% Similarity=0.131 Sum_probs=158.8
Q ss_pred ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec------cccCCeeEEEE-CCCCcEEEEeeC-CCcEEEE
Q 018675 74 TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE------GHENEVKSVSW-NASGTLLATCGR-DKSVWIW 145 (352)
Q Consensus 74 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~------~h~~~v~~v~~-~~~~~~l~s~~~-d~~v~vw 145 (352)
-....+++++++|+++++...++.|.+|+.... . ...+. ++...+..+++ .+++.++++... ++.|.+|
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~--~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-F--KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC-E--EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred cCCCceEEECCCCCEEEEECCCCEEEEECCCCc-E--EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 356788999999999888888999999986532 2 22221 24457889999 577777776643 7899999
Q ss_pred ecCCCCeeEEEEEee-cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcC
Q 018675 146 EVMPGNEFECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNA 224 (352)
Q Consensus 146 d~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~ 224 (352)
|. .+.. +..+. .+...+..+++.|++.++++...++.|.+|+.... ....+.. .++...+..++++|
T Consensus 106 d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~------~~~~~~~--~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 106 NQ-YGQF---VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN------VLHKFGC--SKHLEFPNGVVVND 173 (286)
T ss_dssp CT-TSCE---EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC------EEEEEEC--TTTCSSEEEEEECS
T ss_pred CC-CCcE---EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC------EEEEeCC--CCccCCcEEEEECC
Confidence 93 3432 22232 23356789999999988887777889999964321 1222211 13345688999999
Q ss_pred CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeec-ccCcceEEEEecCCc-eEEecCCCC-eEEEEEccCCcc
Q 018675 225 KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG-YHDRTIFSVHWSREG-IIASGAADD-SVQFFVESKDDL 301 (352)
Q Consensus 225 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~~s~~~d~-~v~~~~~~~~~~ 301 (352)
+|+++++...++.|++|+.+... ...+.. .+...+..+++++++ ++++...++ .+.+|+.....
T Consensus 174 ~g~l~v~~~~~~~i~~~~~~g~~------------~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~- 240 (286)
T 1q7f_A 174 KQEIFISDNRAHCVKVFNYEGQY------------LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL- 240 (286)
T ss_dssp SSEEEEEEGGGTEEEEEETTCCE------------EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE-
T ss_pred CCCEEEEECCCCEEEEEcCCCCE------------EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCE-
Confidence 99988888889999999864211 111111 112457788888876 555555565 89999643211
Q ss_pred ccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 302 ~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
...+ . .......+.+++++|+++ ++++ +.|+.|++|++..
T Consensus 241 -----~~~~-~-~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 241 -----ISAL-E-SKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp -----EEEE-E-ESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSC
T ss_pred -----EEEE-c-ccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEccc
Confidence 1111 1 111223478999999985 7777 5699999999753
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=5.1e-13 Score=116.75 Aligned_cols=248 Identities=14% Similarity=0.105 Sum_probs=163.6
Q ss_pred cceEEEEECCCCCEEEEEeCC------------------------CcEEEEEccCCceeeeEee-ccccCCeeEEEECCC
Q 018675 75 RTVRSCAWSPSGKLLATASFD------------------------ATTCIWEDVGGDYECVATL-EGHENEVKSVSWNAS 129 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d------------------------~~i~i~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~ 129 (352)
..+.+++++|+|+++++...+ +.|.+||..+++. .... .++-..+..++++|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI--LQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE--EEEECTTTCSSEEEEEECTT
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE--EeccCCCccCCceEEEECCC
Confidence 578999999999999988877 4799998766653 2222 244457889999999
Q ss_pred CcEEEEeeCCCcEEEEecCCCCeeEEEEEe---------ecCccCeeEEEEcC-CCCEEEEEe-CCCcEEEEecCCCCCC
Q 018675 130 GTLLATCGRDKSVWIWEVMPGNEFECVSVL---------QGHAQDVKMVQWHP-TMDVLFSCS-YDNTIKVWWAEDTDSD 198 (352)
Q Consensus 130 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~---------~~h~~~v~~~~~~~-~~~~l~s~~-~d~~i~iw~~~~~~~~ 198 (352)
|+++++...++.|++|+..... ..+..+ .++......++++| ++.++++.+ .++.|++|+....
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~--- 176 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK--- 176 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC---
T ss_pred CCEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---
Confidence 9998888889999999964321 112222 23344678999999 788888876 6899999973221
Q ss_pred CceeEeeeeccC------CCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEee-cccCcc
Q 018675 199 NWHCVQTISESN------NGHSSTIWALSFNAK-GDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS-GYHDRT 270 (352)
Q Consensus 199 ~~~~~~~~~~~~------~~h~~~i~~l~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 270 (352)
....+.... .++......|+++|+ +.++++...+++|++|+.+..+. ...+. ..+...
T Consensus 177 ---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~-----------~~~~~~~~~~~~ 242 (329)
T 3fvz_A 177 ---FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF-----------VREIKHASFGRN 242 (329)
T ss_dssp ---EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-----------EEEECCTTTTTC
T ss_pred ---EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE-----------EEEEeccccCCC
Confidence 122221100 123345889999998 78888888899999998752211 11111 123345
Q ss_pred eEEEEecCCc-------eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeE
Q 018675 271 IFSVHWSREG-------IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMI 343 (352)
Q Consensus 271 i~~~~~~~~~-------~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i 343 (352)
++.+.++|+- .+++...+..+++|+.....+. ..+....++......++++|++ .++++...++.|
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~------~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I 315 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII------DVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTV 315 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE------EEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE------EEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEE
Confidence 6666666621 2223334457888865432211 1111123566779999999998 689999999999
Q ss_pred EEEeecc
Q 018675 344 KIWELAN 350 (352)
Q Consensus 344 ~iw~~~~ 350 (352)
++|++..
T Consensus 316 ~~~~~~~ 322 (329)
T 3fvz_A 316 WKFTLTE 322 (329)
T ss_dssp EEEEEEE
T ss_pred EEEeCCc
Confidence 9999853
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=1.8e-14 Score=128.74 Aligned_cols=276 Identities=8% Similarity=0.041 Sum_probs=160.4
Q ss_pred eEEEEEccCCCCCCCccEEEEeeC-C--CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 24 VWSLAWKPTAGVDGVAPVFASCSG-D--KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 24 V~~i~~~p~~~~~~~~~~l~s~s~-D--~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
+.+++|+|+ ++.++..+. + ..+.+|+..++.. .... ..+......+.|+|||+.|+.++.++.+.+
T Consensus 38 ~~~~~~Spd------G~~l~~~~~~~g~~~l~~~d~~~~~~----~~l~-~~~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (396)
T 3c5m_A 38 FYQKCFTQD------GKKLLFAGDFDGNRNYYLLNLETQQA----VQLT-EGKGDNTFGGFISTDERAFFYVKNELNLMK 106 (396)
T ss_dssp TTSCCBCTT------SCEEEEEECTTSSCEEEEEETTTTEE----EECC-CSSCBCTTTCEECTTSSEEEEEETTTEEEE
T ss_pred eecCcCCCC------CCEEEEEEecCCCceEEEEECCCCcE----EEee-cCCCCccccceECCCCCEEEEEEcCCcEEE
Confidence 777889997 466665543 3 3677778766532 1111 111122233789999999999999999999
Q ss_pred EEccCCceeeeEeeccccCCeeE-------------------EEECCCCcEEEEe-----eCCCcEEEEecCCCCeeEEE
Q 018675 101 WEDVGGDYECVATLEGHENEVKS-------------------VSWNASGTLLATC-----GRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~l~s~-----~~d~~v~vwd~~~~~~~~~~ 156 (352)
|+..+++...+.. .+...... +.|+|+++.++.+ ..+..|.+||+..+....
T Consensus 107 ~d~~~~~~~~~~~--~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-- 182 (396)
T 3c5m_A 107 VDLETLEEQVIYT--VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV-- 182 (396)
T ss_dssp EETTTCCEEEEEE--CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE--
T ss_pred EECCCCCcEEEEe--cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe--
Confidence 9987765433332 22221111 3456776655443 456789999987654221
Q ss_pred EEeecCccCeeEEEEcC-CCCEEEEEeCC------CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 157 SVLQGHAQDVKMVQWHP-TMDVLFSCSYD------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~~-~~~~l~s~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
+..+...+..+.|+| ++..++..+.+ ..|.+|+..... ...+.. ......+..+.|+|+|++|
T Consensus 183 --~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~------~~~l~~--~~~~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 183 --IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN------VRKIKE--HAEGESCTHEFWIPDGSAM 252 (396)
T ss_dssp --EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC------CEESSC--CCTTEEEEEEEECTTSSCE
T ss_pred --eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc------eeEeec--cCCCccccceEECCCCCEE
Confidence 223556788899999 77766665543 357777654321 111211 0012357889999999987
Q ss_pred EEEeCC-----CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC-Cc-eEEecC----------------
Q 018675 230 VSCSDD-----LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EG-IIASGA---------------- 286 (352)
Q Consensus 230 ~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~s~~---------------- 286 (352)
+..+.+ +.|.+||+..... ..+.... . .. ..|++ ++ .++.++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~---------~~l~~~~----~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLEN---------EEVMVMP----P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCE---------EEEEECC----S-EE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred EEEecCCCCccceEEEEECCCCCe---------EEeeeCC----C-CC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 776543 4499998753211 1111111 1 11 56666 65 444332
Q ss_pred CCCeEEEEEccCCccccCcccceeeecccccCc-----------ceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 287 ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM-----------DVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 287 ~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.+..+++|+...... .. ...+.. .+..++|+|+++.++.+...++...||.+.
T Consensus 318 ~~~~i~~~d~~~~~~------~~----l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSA------QK----LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCEEEEEETTTTBC------CE----EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCcEEEEecccCce------EE----ccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 246778886543211 11 112222 256788999998766666667777787764
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.63 E-value=5.1e-14 Score=123.51 Aligned_cols=194 Identities=14% Similarity=0.155 Sum_probs=131.9
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecce-----ecceEEEEECCCCCEEEEEeCC--
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMH-----TRTVRSCAWSPSGKLLATASFD-- 95 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~s~~~~~l~s~~~d-- 95 (352)
.+.+++|+|+. ..++++++.++.|.+|+..+++...... ..+ ...+..++|+|+|+.|++++.+
T Consensus 44 ~~~~~~~s~dg-----~~~~v~~~~~~~i~~~d~~t~~~~~~~~----~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 114 (349)
T 1jmx_B 44 GPGTAMMAPDN-----RTAYVLNNHYGDIYGIDLDTCKNTFHAN----LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQ 114 (349)
T ss_dssp SSCEEEECTTS-----SEEEEEETTTTEEEEEETTTTEEEEEEE----SCCSTTEEEECSSCEEECTTSSEEEEEEEEEE
T ss_pred CCceeEECCCC-----CEEEEEeCCCCcEEEEeCCCCcEEEEEE----cccccccccccccceEECCCCCEEEEEccccc
Confidence 57789999973 1345666678999999998765322211 111 2347889999999999988865
Q ss_pred ----------CcEEEEEccCCce-eeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecC--
Q 018675 96 ----------ATTCIWEDVGGDY-ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH-- 162 (352)
Q Consensus 96 ----------~~i~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h-- 162 (352)
+.+.+||..+++. ..+.... +...+.+++|+|+++ ++.++. .|.+||+..+.... .+..+
T Consensus 115 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~---~~~~~~~ 187 (349)
T 1jmx_B 115 RLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTV---ALPLRNW 187 (349)
T ss_dssp ECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEE---EECSTTC
T ss_pred ccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceec---ccccccc
Confidence 8999999876432 1222232 344688999999999 555543 49999986554322 11111
Q ss_pred ------------------------------------------------------------------ccCeeEEEEcC-CC
Q 018675 163 ------------------------------------------------------------------AQDVKMVQWHP-TM 175 (352)
Q Consensus 163 ------------------------------------------------------------------~~~v~~~~~~~-~~ 175 (352)
...+..+.++| ++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg 267 (349)
T 1jmx_B 188 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP 267 (349)
T ss_dssp CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT
T ss_pred CCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC
Confidence 11344667889 99
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
+.++++ ++.|.+|++... .....+. ....+.+++|+|++++|++++.++.|++||.+
T Consensus 268 ~~l~~~--~~~v~~~d~~~~-----~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 268 NQIYGV--LNRLAKYDLKQR-----KLIKAAN-----LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp TEEEEE--ESEEEEEETTTT-----EEEEEEE-----CSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred CEEEEE--cCeEEEEECccC-----eEEEEEc-----CCCCccceEECCCCCEEEEecCCCeEEEEecc
Confidence 988887 889999986542 2223332 12346689999999988888889999999975
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.63 E-value=1.2e-13 Score=133.81 Aligned_cols=215 Identities=13% Similarity=0.179 Sum_probs=130.6
Q ss_pred eeecCCccc-----eEEEEEccCCCCCCCccEEEEeeCC---------CeEEEEecCCCceeeeeeeeeecceecceEEE
Q 018675 15 QTLEGHTDR-----VWSLAWKPTAGVDGVAPVFASCSGD---------KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSC 80 (352)
Q Consensus 15 ~~~~gH~~~-----V~~i~~~p~~~~~~~~~~l~s~s~D---------~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~ 80 (352)
..+.+|... ..++.|+|+ ++.++.++.+ +.+.+||+.+++. ... ..|...+...
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~Spd------g~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~----~~l--~~~~~~~~~~ 117 (740)
T 4a5s_A 50 VFLENSTFDEFGHSINDYSISPD------GQFILLEYNYVKQWRHSYTASYDIYDLNKRQL----ITE--ERIPNNTQWV 117 (740)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT------SSEEEEEEEEEECSSSCEEEEEEEEETTTTEE----CCS--SCCCTTEEEE
T ss_pred EEEechhhhhhcccccceEECCC------CCEEEEEECCeeeEEEccceEEEEEECCCCcE----EEc--ccCCCcceee
Confidence 345666543 234788997 5788888877 4556999987642 111 2356789999
Q ss_pred EECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCe-----------------eEEEECCCCcEEEEeeCCC---
Q 018675 81 AWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEV-----------------KSVSWNASGTLLATCGRDK--- 140 (352)
Q Consensus 81 ~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v-----------------~~v~~~~~~~~l~s~~~d~--- 140 (352)
+|||||+.||.+. |+.|.+|+..+++... .+..++...+ ..+.|+|||+.|+.++.|.
T Consensus 118 ~~SPdG~~la~~~-~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v 195 (740)
T 4a5s_A 118 TWSPVGHKLAYVW-NNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEV 195 (740)
T ss_dssp EECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTC
T ss_pred EECCCCCEEEEEE-CCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCC
Confidence 9999999999884 6899999877665322 2223333222 3589999999998876433
Q ss_pred ---------------------------------cEEEEecCC---CCeeEEEEEee-----cCccCeeEEEEcCCCCEEE
Q 018675 141 ---------------------------------SVWIWEVMP---GNEFECVSVLQ-----GHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 141 ---------------------------------~v~vwd~~~---~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~ 179 (352)
+|.+||+.. +.......... +|...+..++|+|+++.++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~ 275 (740)
T 4a5s_A 196 PLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISL 275 (740)
T ss_dssp CEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEE
T ss_pred ceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEE
Confidence 467777765 42111111111 2666788999999998665
Q ss_pred EEeC----CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEE-----EEEEcCCCCEEE-EEe-CCC--cEEEEcCC
Q 018675 180 SCSY----DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW-----ALSFNAKGDKLV-SCS-DDL--TIKIWGAD 244 (352)
Q Consensus 180 s~~~----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~-----~l~~~~~~~~l~-s~~-~dg--~i~iwd~~ 244 (352)
.... +..|.+|+...... .+.|.........+|...|. ...|+|||+.|+ ..+ .+| .|.+|+.+
T Consensus 276 ~~~~r~~~~~~i~~~d~~tg~~-~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 276 QWLRRIQNYSVMDICDYDESSG-RWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp EEEESSTTEEEEEEEEEETTTT-EEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred EEeCCCCCEEEEEEEECCCCcc-ccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 5432 23688888654320 01111000000012333333 678999999876 555 455 56666654
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.63 E-value=5.7e-12 Score=110.00 Aligned_cols=214 Identities=10% Similarity=0.021 Sum_probs=138.2
Q ss_pred eeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 13 EIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 13 ~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
....+.++...+.+++|+|+ +.+++++..++.|.+|+..++... ... ..+...+.+++++|+|+++++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~------g~l~~~~~~~~~i~~~d~~~~~~~----~~~-~~~~~~~~~i~~~~dg~l~v~~ 104 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQ------GQLFLLDVFEGNIFKINPETKEIK----RPF-VSHKANPAAIKIHKDGRLFVCY 104 (333)
T ss_dssp EEEEEESSCCCEEEEEECTT------SCEEEEETTTCEEEEECTTTCCEE----EEE-ECSSSSEEEEEECTTSCEEEEE
T ss_pred eeEEEeccCccccCcEECCC------CCEEEEECCCCEEEEEeCCCCcEE----EEe-eCCCCCcceEEECCCCcEEEEe
Confidence 34456677778899999986 467778888999999998765321 111 1244678999999999988877
Q ss_pred eCC----CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC------CCcEEEEecCCCCeeEEEEEeecC
Q 018675 93 SFD----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR------DKSVWIWEVMPGNEFECVSVLQGH 162 (352)
Q Consensus 93 ~~d----~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~h 162 (352)
..+ +.|.+|+..++..........+...+.++.++|++.++++... .+.|..++...+. ... +..+
T Consensus 105 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~-~~~---~~~~ 180 (333)
T 2dg1_A 105 LGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTP---IIQN 180 (333)
T ss_dssp CTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEE---EEEE
T ss_pred CCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-EEE---eecC
Confidence 666 6899998766543322111123457899999999988877654 2445555543222 221 1122
Q ss_pred ccCeeEEEEcCCCCEEE-EEeCCCcEEEEecCCCCCCCceeEe-eeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEE
Q 018675 163 AQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQ-TISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240 (352)
Q Consensus 163 ~~~v~~~~~~~~~~~l~-s~~~d~~i~iw~~~~~~~~~~~~~~-~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~i 240 (352)
......++|+|+++.++ +.+.++.|.+|+..... ....... .......++ ..+..++++++|.++++...++.|.+
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g-~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDG-VTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLV 258 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-SSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC-cCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEE
Confidence 33567899999998654 44567899999874211 1111100 111111122 35778999999998888888889999
Q ss_pred EcC
Q 018675 241 WGA 243 (352)
Q Consensus 241 wd~ 243 (352)
||.
T Consensus 259 ~d~ 261 (333)
T 2dg1_A 259 FNK 261 (333)
T ss_dssp ECT
T ss_pred ECC
Confidence 975
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.62 E-value=2.9e-12 Score=112.47 Aligned_cols=239 Identities=13% Similarity=0.189 Sum_probs=148.2
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC---Cc--EEEEEccCCceeeeEeeccccCCee
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD---AT--TCIWEDVGGDYECVATLEGHENEVK 122 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~--i~i~~~~~~~~~~~~~~~~h~~~v~ 122 (352)
++.|.+|+..++.. .. + ..+..++|+|||+.|+..+.+ +. |.+|+..+++...+. .+.. +.
T Consensus 42 ~~~l~~~d~~~~~~----~~-l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~---~~~~-~~ 107 (347)
T 2gop_A 42 ENTIVIENLKNNAR----RF-I-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL---EAKN-IR 107 (347)
T ss_dssp EEEEEEEETTTCCE----EE-E-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE---EESE-EE
T ss_pred cceEEEEeCCCCce----EE-c-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE---cCCC-cc
Confidence 67788888876532 11 1 457889999999999887754 34 556666655433222 2233 89
Q ss_pred EEEECCCCcEEEEeeCC---------------------------CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC
Q 018675 123 SVSWNASGTLLATCGRD---------------------------KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 123 ~v~~~~~~~~l~s~~~d---------------------------~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 175 (352)
.+.|+|+++.|+.++.+ ..|.+||+..+..... +.. . .+..+.|+|++
T Consensus 108 ~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~---l~~-~-~~~~~~~spdg 182 (347)
T 2gop_A 108 SLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEE---FEK-P-RFSSGIWHRDK 182 (347)
T ss_dssp EEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEE---EEE-E-TTCEEEEETTE
T ss_pred ceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEee---ecC-C-CcccccCCCCe
Confidence 99999999988877642 5788899865432122 222 2 67889999999
Q ss_pred CEEEEEeCCC-------cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC--------cEEE
Q 018675 176 DVLFSCSYDN-------TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL--------TIKI 240 (352)
Q Consensus 176 ~~l~s~~~d~-------~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg--------~i~i 240 (352)
+++++..+. ...+|.+. . .. ...+.. + ..+.++ +|+|++|+.++.++ .|.+
T Consensus 183 -~~~~~~~~~~~~~~~~~~~l~~~d-~--~~---~~~l~~----~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~ 248 (347)
T 2gop_A 183 -IVVNVPHREIIPQYFKFWDIYIWE-D--GK---EEKMFE----K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYI 248 (347)
T ss_dssp -EEEEEECCCSSCCSSCCEEEEEEE-T--TE---EEEEEE----E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEE
T ss_pred -EEEEEecccccccccccccEEEeC-C--Cc---eEEecc----C-cceeeE--CCCCCEEEEEEccccCCccccceEEE
Confidence 777776542 44566443 1 11 122221 2 334444 89999888777543 5667
Q ss_pred EcCCccccccCCCCccceeeEEeecccCcceEE-EEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCc
Q 018675 241 WGADITRMQSGDGYASWRHLCTISGYHDRTIFS-VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDM 319 (352)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 319 (352)
|| . ... ..+...+...+.. +.|+ ++++++++.++.+++| ... . . . .....+..
T Consensus 249 ~d-~-~~~------------~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~-g----~----~-~~~~~~~~ 302 (347)
T 2gop_A 249 YD-G-KEV------------MGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWD-G----E----I-KPIAKGRH 302 (347)
T ss_dssp EC-S-SCE------------EESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EES-S----S----E-EEEECSSS
T ss_pred EC-C-Cce------------EeccccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcC-C----c----e-EEEecCCC
Confidence 76 2 111 1111123344554 7888 6777888889999998 642 1 1 1 11223467
Q ss_pred ceeEEEecCCCcceEEEecCCCeE-EEEee
Q 018675 320 DVNSVQWSPGERRLLASASDDGMI-KIWEL 348 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i-~iw~~ 348 (352)
.|.+++|+| . ++++++.++.. +||.+
T Consensus 303 ~v~~~~~s~--~-~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 303 WIMGFDVDE--I-VVYLKETATRLRELFTW 329 (347)
T ss_dssp EEEEEEESS--S-EEEEEECSSSCCEEEEE
T ss_pred eEEeeeeeC--c-EEEEEcCCCChHHheEe
Confidence 899999998 3 55666666664 78865
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=2.5e-13 Score=129.95 Aligned_cols=160 Identities=9% Similarity=0.006 Sum_probs=110.5
Q ss_pred eecceEEEEECCCCCEEEEEeCC----------CcEEEEEccC------CceeeeEeec-cccCCeeEEEECCCCcEEEE
Q 018675 73 HTRTVRSCAWSPSGKLLATASFD----------ATTCIWEDVG------GDYECVATLE-GHENEVKSVSWNASGTLLAT 135 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d----------~~i~i~~~~~------~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s 135 (352)
|...+..++|+|||+.|++++.| ..|.+|+..+ +.. ..+. .+...+..++|+|+|++|+.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV---RELSDDAHRFVTGPRLSPDGRQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS---EESSCSCSSEECCCEECTTSSEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce---eEEEecCCCcccCceECCCCCEEEE
Confidence 45678899999999999998877 5788998776 432 2334 45567888999999999988
Q ss_pred eeCC--------CcEEEEecC-CCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeee
Q 018675 136 CGRD--------KSVWIWEVM-PGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 206 (352)
Q Consensus 136 ~~~d--------~~v~vwd~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 206 (352)
++.+ ..|.+||+. .+..........+|...+..+.|+|++++++++..++...+|..... .... ..+
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~-~~~~---~~l 280 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA-TGAA---TQL 280 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTT-TCCE---EES
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECC-CCce---eec
Confidence 8755 379999987 34211223333445677889999999998888888885555533211 1111 111
Q ss_pred eccCCCCcc--------cEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 207 SESNNGHSS--------TIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 207 ~~~~~~h~~--------~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
.. .+.. .+.+++|+|++.++++++. +.+++|.+
T Consensus 281 ~~---~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 281 CR---REEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp SC---CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred cc---ccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 11 1111 1456889999999999998 99999954
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=3.7e-12 Score=122.96 Aligned_cols=201 Identities=11% Similarity=0.071 Sum_probs=132.0
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCC-----eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDK-----TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~-----~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+|...+.+++|+|+ +++||.++.++ +|++|++.+++... ... ....+..++|+|||+.|+.++
T Consensus 122 ~~~~~~~~~~~SPD------g~~la~~~~~~G~~~~~i~v~d~~tg~~~~---~~~---~~~~~~~~~wspDg~~l~~~~ 189 (710)
T 2xdw_A 122 DGTVALRGYAFSED------GEYFAYGLSASGSDWVTIKFMKVDGAKELP---DVL---ERVKFSCMAWTHDGKGMFYNA 189 (710)
T ss_dssp TSCEEEEEEEECTT------SSEEEEEEEETTCSCEEEEEEETTTTEEEE---EEE---EEECSCCEEECTTSSEEEEEE
T ss_pred CCCEEEEEEEECCC------CCEEEEEEcCCCCceEEEEEEECCCCCCCc---ccc---cCcccceEEEEeCCCEEEEEE
Confidence 45567889999997 56777665443 89999998765321 111 122366789999999999998
Q ss_pred CCCc----------------EEEEEccCCcee--eeEeeccccCCeeEEEECCCCcEEEEeeC-----CCcEEEEecCC-
Q 018675 94 FDAT----------------TCIWEDVGGDYE--CVATLEGHENEVKSVSWNASGTLLATCGR-----DKSVWIWEVMP- 149 (352)
Q Consensus 94 ~d~~----------------i~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-----d~~v~vwd~~~- 149 (352)
.++. |.+|+..++... .+.....|...+..+.|+|+|++|+.++. +..|.+||+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 269 (710)
T 2xdw_A 190 YPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE 269 (710)
T ss_dssp CCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred ECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccc
Confidence 8766 889987665422 22232334556789999999998887764 56899999864
Q ss_pred -----CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC----cEEEEecCCCCCCCceeEeeeeccCCCCc--ccEE
Q 018675 150 -----GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN----TIKVWWAEDTDSDNWHCVQTISESNNGHS--STIW 218 (352)
Q Consensus 150 -----~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~h~--~~i~ 218 (352)
+.. ....+..+...+.. .|+|++..|+..+..+ .|.+|++.......+.. +. .|. ..+.
T Consensus 270 ~~~~~~~~--~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~---l~----~~~~~~~~~ 339 (710)
T 2xdw_A 270 SNGITGIL--KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKV---LV----PEHEKDVLE 339 (710)
T ss_dssp SSSSCSSC--CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE---EE----CCCSSCEEE
T ss_pred ccccCCcc--ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccee---cc----CCCCCCeEE
Confidence 221 12334445544443 5888888777665533 58888765432212322 21 122 2577
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEE
Q 018675 219 ALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 219 ~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
.+.|++++.++++...|+..+||
T Consensus 340 ~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 340 WVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp EEEEETTTEEEEEEEETTEEEEE
T ss_pred EEEEEcCCEEEEEEEECCEEEEE
Confidence 88998878888888888866665
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.56 E-value=6.6e-12 Score=109.64 Aligned_cols=248 Identities=11% Similarity=0.110 Sum_probs=161.9
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCC------------------------CeEEEEecCCCceeeeeeeeeecceec
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGD------------------------KTVRIWEQSASSRFWNCKAVLEEMHTR 75 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D------------------------~~v~~w~~~~~~~~~~~~~~~~~~h~~ 75 (352)
-.+.+.+++++|+ +.++++.+.+ ++|.+|+..+++.. ......+-.
T Consensus 22 ~l~~v~~va~d~~------G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~~~~~ 91 (329)
T 3fvz_A 22 LPGQVSGVALDSK------NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL----QSSGKNLFY 91 (329)
T ss_dssp CCSCEEEEEECTT------CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE----EEECTTTCS
T ss_pred ecCCceEEEECCC------CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE----eccCCCccC
Confidence 3567999999997 4678887777 47999998765432 111122334
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEee---------ccccCCeeEEEECC-CCcEEEEee-CCCcEEE
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL---------EGHENEVKSVSWNA-SGTLLATCG-RDKSVWI 144 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~---------~~h~~~v~~v~~~~-~~~~l~s~~-~d~~v~v 144 (352)
....++++|+|+++++...++.|.+|+..+.. ..+..+ .++-..+..++++| ++.++++.+ .++.|++
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ 170 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEE
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEE
Confidence 67899999999999998889999999864431 123333 23445688999999 888888886 6899999
Q ss_pred EecCCCCeeEEEEEe-------ecCccCeeEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCccc
Q 018675 145 WEVMPGNEFECVSVL-------QGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST 216 (352)
Q Consensus 145 wd~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (352)
|+. .+.....+... .++......++++|+ +.++++...++.|++|+.... ..+..+. ...+...
T Consensus 171 ~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G-----~~~~~~~--~~~~~~~ 242 (329)
T 3fvz_A 171 FSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK-----EFVREIK--HASFGRN 242 (329)
T ss_dssp ECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC-----CEEEEEC--CTTTTTC
T ss_pred EcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC-----cEEEEEe--ccccCCC
Confidence 994 34322211110 012234778999998 677777778899999986521 1223332 1245667
Q ss_pred EEEEEEcC------CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEee--cccCcceEEEEecCCc-eEEecCC
Q 018675 217 IWALSFNA------KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS--GYHDRTIFSVHWSREG-IIASGAA 287 (352)
Q Consensus 217 i~~l~~~~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~-~~~s~~~ 287 (352)
+.+++|+| ++..+++...+.+|++|+....+. ...+. ..+...+..+++++++ ++++...
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~-----------~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI-----------IDVFKPVRKHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE-----------EEEECCSSSCCSSEEEEEECTTSEEEEEESS
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE-----------EEEEcCCCCccCCeeEEEECCCCCEEEEECC
Confidence 88999999 333333333455899998643221 11111 1234457888999887 5677777
Q ss_pred CCeEEEEEcc
Q 018675 288 DDSVQFFVES 297 (352)
Q Consensus 288 d~~v~~~~~~ 297 (352)
++.|+.|...
T Consensus 312 ~~~I~~~~~~ 321 (329)
T 3fvz_A 312 TNTVWKFTLT 321 (329)
T ss_dssp SCCEEEEEEE
T ss_pred CCEEEEEeCC
Confidence 8889888653
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.54 E-value=1.6e-12 Score=125.20 Aligned_cols=203 Identities=11% Similarity=0.033 Sum_probs=129.8
Q ss_pred CCccceEEEEEccCCCCCCCccEEE-----EeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFA-----SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~-----s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+|...+.+++|+|+ +++|| +|+.+.+|++|++.+++.. . ...+ .......++|+|||+.|+.++
T Consensus 118 ~~~~~~~~~~~SPD------G~~la~~~~~~G~~~~~i~v~dl~tg~~~-~-~~~~---~~~~~~~~~wspDg~~l~~~~ 186 (695)
T 2bkl_A 118 DGTVSLGTWAVSWD------GKKVAFAQKPNAADEAVLHVIDVDSGEWS-K-VDVI---EGGKYATPKWTPDSKGFYYEW 186 (695)
T ss_dssp SSCEEEEEEEECTT------SSEEEEEEEETTCSCCEEEEEETTTCCBC-S-SCCB---SCCTTCCCEECTTSSEEEEEE
T ss_pred CCCEEEEEEEECCC------CCEEEEEECCCCCceEEEEEEECCCCCCc-C-Cccc---CcccccceEEecCCCEEEEEE
Confidence 57778899999997 56777 4555679999999876531 0 0011 111126789999999999999
Q ss_pred CCCc-------------EEEEEccCCce--eeeEeeccccCCeeEEEECCCCcEEEEeeCCC----cEEEEecCCCCeeE
Q 018675 94 FDAT-------------TCIWEDVGGDY--ECVATLEGHENEVKSVSWNASGTLLATCGRDK----SVWIWEVMPGNEFE 154 (352)
Q Consensus 94 ~d~~-------------i~i~~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~----~v~vwd~~~~~~~~ 154 (352)
.|.. |.+|+..++.. .++.....|...+..+.|+|+|++|+.++.++ .|.+|+...+. .
T Consensus 187 ~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~- 264 (695)
T 2bkl_A 187 LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-F- 264 (695)
T ss_dssp CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-C-
T ss_pred ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-e-
Confidence 8876 99998766542 23333344556788999999999888777665 66666643332 2
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEE
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCS---YDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVS 231 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 231 (352)
..+..+...+....+ +++.+++... .++.|.+|++.......+..+ ... .....+..++++ ++.++++
T Consensus 265 --~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l---~~~--~~~~~l~~~~~~-~~~lv~~ 335 (695)
T 2bkl_A 265 --RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEI---VPE--DSSASLLSVSIV-GGHLSLE 335 (695)
T ss_dssp --EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEE---ECC--CSSCEEEEEEEE-TTEEEEE
T ss_pred --EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEE---ecC--CCCCeEEEEEEE-CCEEEEE
Confidence 223334445555556 5555444443 246788887654322222222 110 113457778887 6677888
Q ss_pred EeCCCcEEEEcC
Q 018675 232 CSDDLTIKIWGA 243 (352)
Q Consensus 232 ~~~dg~i~iwd~ 243 (352)
...|+..++|.+
T Consensus 336 ~~~dg~~~l~~~ 347 (695)
T 2bkl_A 336 YLKDATSEVRVA 347 (695)
T ss_dssp EEETTEEEEEEE
T ss_pred EEECCEEEEEEE
Confidence 889999888854
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.53 E-value=9.7e-10 Score=93.87 Aligned_cols=286 Identities=8% Similarity=-0.009 Sum_probs=181.9
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
.+..+...+.++++.|+ +.++++...++.|.+|+.. +. ..... . ..+...+.+++++++|++.++...+
T Consensus 9 ~~~~~~~~~~~i~~d~~------g~l~v~~~~~~~v~~~d~~-~~-~~~~~--~-~~~~~~~~~i~~~~~g~l~v~~~~~ 77 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDK------GKVWITQHKANMISCINLD-GK-ITEYP--L-PTPDAKVMCLTISSDGEVWFTENAA 77 (299)
T ss_dssp ECCSSSCCEEEEEECTT------SCEEEEETTTTEEEEECTT-CC-EEEEE--C-SSTTCCEEEEEECTTSCEEEEETTT
T ss_pred cCCCcCCCccceEECCC------CCEEEEecCCCcEEEEcCC-CC-eEEec--C-CcccCceeeEEECCCCCEEEeCCCC
Confidence 34556678999999986 4567776668999999977 32 11111 1 1123568899999999988887778
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM 175 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 175 (352)
+.+..|+.. +... ...+......+..+.+.+++.++++...++.|..||. .+.. .. .....+...+..+.+.+++
T Consensus 78 ~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~-~~~~~~~~~~~~i~~~~~g 152 (299)
T 2z2n_A 78 NKIGRITKK-GIIK-EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI-RE-YELPNKGSYPSFITLGSDN 152 (299)
T ss_dssp TEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE-EE-EECSSTTCCEEEEEECTTS
T ss_pred CeEEEECCC-CcEE-EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE-EE-ecCCCCCCCCceEEEcCCC
Confidence 889998764 3322 2222234457889999999998888777888999987 3332 21 1222234567889999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCc
Q 018675 176 DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYA 255 (352)
Q Consensus 176 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (352)
.+.++...++.|..|+. .. .. ..+. .......+..+++++++.++++...++.|.+|+.. ....
T Consensus 153 ~l~v~~~~~~~i~~~~~-~g---~~---~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~------ 216 (299)
T 2z2n_A 153 ALWFTENQNNAIGRITE-SG---DI---TEFK--IPTPASGPVGITKGNDDALWFVEIIGNKIGRITTS-GEIT------ 216 (299)
T ss_dssp CEEEEETTTTEEEEECT-TC---CE---EEEE--CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEE------
T ss_pred CEEEEeCCCCEEEEEcC-CC---cE---EEee--CCCCCCcceeEEECCCCCEEEEccCCceEEEECCC-CcEE------
Confidence 87777666788988865 21 11 1111 11234568899999999988887778899999862 1110
Q ss_pred cceeeEEeecccCcceEEEEecCCce-EEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceE
Q 018675 256 SWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLL 334 (352)
Q Consensus 256 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l 334 (352)
. .. .......+..+.+++++. +++...++.+..++... . .... ....+...+.++++ +++. ++
T Consensus 217 ---~-~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g-~------~~~~--~~~~~~~~~~~i~~-~~g~-l~ 280 (299)
T 2z2n_A 217 ---E-FK-IPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNN-I------IEEY--PIQIKSAEPHGICF-DGET-IW 280 (299)
T ss_dssp ---E-EE-CSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTT-E------EEEE--ECSSSSCCEEEEEE-CSSC-EE
T ss_pred ---E-EE-CCCCCCCceeEEECCCCCEEEeccCCceEEEECCCC-c------eEEE--eCCCCCCccceEEe-cCCC-EE
Confidence 0 00 111234577888888764 44444677888886521 1 0111 12234567899999 8775 56
Q ss_pred EEecCCCeEEEEeecc
Q 018675 335 ASASDDGMIKIWELAN 350 (352)
Q Consensus 335 ~s~~~Dg~i~iw~~~~ 350 (352)
++.+ .+.+..++..+
T Consensus 281 v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 281 FAME-CDKIGKLTLIK 295 (299)
T ss_dssp EEET-TTEEEEEEEC-
T ss_pred EEec-CCcEEEEEcCc
Confidence 5555 45566666543
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.53 E-value=9e-12 Score=106.94 Aligned_cols=232 Identities=13% Similarity=0.096 Sum_probs=146.1
Q ss_pred cceEEEEECCCCC-EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCee
Q 018675 75 RTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153 (352)
Q Consensus 75 ~~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 153 (352)
....+++|+|+|+ +++++..++.|..|+..++ . ..+..+...+.++++++++.++++...++.|.+||...+...
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E---EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e---EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 4567889999998 7888888999999987665 2 234456678999999999998887777789999997555422
Q ss_pred EEEEEeecC-ccCeeEEEEcCCCCEEEEEeC-----------------CCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 154 ECVSVLQGH-AQDVKMVQWHPTMDVLFSCSY-----------------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 154 ~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~-----------------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
.......+. ...+..++++|++.++++.+. .+.|..++.. ... ..+. .+..
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~----g~~---~~~~----~~~~ 172 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD----GTL---SAPI----RDRV 172 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT----SCE---EEEE----CCCS
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC----CCE---EEee----cCCC
Confidence 111111111 124567899999998887321 2344444321 111 1111 2345
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccc-eeeEEeecccCcceEEEEecCCceEEecCCCCeEEEE
Q 018675 216 TIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASW-RHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFF 294 (352)
Q Consensus 216 ~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~ 294 (352)
..+.++|+|+++.+++.+.++.|.+|+++... .. .....+ ......+..+++++++.+..+. ++.+.+|
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g--------~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~ 242 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARG--------ETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-GDGVHVL 242 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSS--------CEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-TTEEEEE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCC--------cCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-CCeEEEE
Confidence 67889999999988777788999999874110 00 001111 1233345567888887555444 7888888
Q ss_pred EccCCccccCcccceeeecccccCcceeEEEe-cCCCcceEEEecCCCeE
Q 018675 295 VESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW-SPGERRLLASASDDGMI 343 (352)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~-sp~~~~~l~s~~~Dg~i 343 (352)
+... ..+.....+.. +++++| +|+++.+++ ++.++..
T Consensus 243 ~~~g----------~~~~~~~~~~~-~~~~~f~~~d~~~L~v-~t~~~l~ 280 (296)
T 3e5z_A 243 TPDG----------DELGRVLTPQT-TSNLCFGGPEGRTLYM-TVSTEFW 280 (296)
T ss_dssp CTTS----------CEEEEEECSSC-CCEEEEESTTSCEEEE-EETTEEE
T ss_pred CCCC----------CEEEEEECCCC-ceeEEEECCCCCEEEE-EcCCeEE
Confidence 6532 11222334555 899999 588766554 4556433
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.52 E-value=3.6e-12 Score=113.61 Aligned_cols=237 Identities=10% Similarity=0.028 Sum_probs=139.6
Q ss_pred EEECCCCCEEEEEeC-CCc--EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEE
Q 018675 80 CAWSPSGKLLATASF-DAT--TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 80 ~~~s~~~~~l~s~~~-d~~--i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 156 (352)
.+|+|||+.|+.++. ++. +.+||..+++. .....++...+..+.|+|+++.|+.++.++.|.+||+..+....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~--~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~-- 116 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA--TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV-- 116 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEE--EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE--
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCce--EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee--
Confidence 789999999998887 664 66677666543 33344555555578899999999999999999999997665322
Q ss_pred EEeecCccCeeEE--EEcCCCCEEEEEe----------------------CCCcEEEEecCCCCCCCceeEeeeeccCCC
Q 018675 157 SVLQGHAQDVKMV--QWHPTMDVLFSCS----------------------YDNTIKVWWAEDTDSDNWHCVQTISESNNG 212 (352)
Q Consensus 157 ~~~~~h~~~v~~~--~~~~~~~~l~s~~----------------------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 212 (352)
....+...+... .++|++..++... .+..|.+|++.... ...+. .
T Consensus 117 -~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~------~~~l~----~ 185 (388)
T 3pe7_A 117 -VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE------STVIL----Q 185 (388)
T ss_dssp -EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC------EEEEE----E
T ss_pred -eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc------eEEee----c
Confidence 223333333333 3478888876432 34568888765432 11221 2
Q ss_pred CcccEEEEEEcC-CCCEEEEEeCCC------cEEEEcCCccccccCCCCccceeeEEeecccC-cceEEEEecCCce-EE
Q 018675 213 HSSTIWALSFNA-KGDKLVSCSDDL------TIKIWGADITRMQSGDGYASWRHLCTISGYHD-RTIFSVHWSREGI-IA 283 (352)
Q Consensus 213 h~~~i~~l~~~~-~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~-~~ 283 (352)
+...+..+.|+| +|+.|+....++ .|.+++.+..... .+..... ..+....|+|++. ++
T Consensus 186 ~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~------------~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 186 ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR------------KVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE------------ESCCCCTTEEEEEEEECTTSSCEE
T ss_pred CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE------------EeeeCCCCcccccceECCCCCEEE
Confidence 345688999999 999888776532 5666665322111 1111111 2356678999873 43
Q ss_pred ecCC--C---CeEEEEEccCCccccCcccceeeecccccC---cceeEEEecCCCcceEEEe--------cCCCeEEEEe
Q 018675 284 SGAA--D---DSVQFFVESKDDLIDGPSYKMLLKKEKAHD---MDVNSVQWSPGERRLLASA--------SDDGMIKIWE 347 (352)
Q Consensus 284 s~~~--d---~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~i~~~~~sp~~~~~l~s~--------~~Dg~i~iw~ 347 (352)
..+. + ..+++|+...... .. +....++. .....++|+|||+.++++. ..+..|.+|+
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~------~~-l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 254 YVSYLKGSPDRFIYSADPETLEN------RQ-LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp EEEEETTCCCEEEEEECTTTCCE------EE-EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred EEecCCCCCcceEEEEecCCCce------EE-EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 3222 1 2377776543211 11 11111210 0122347999998765443 5567899999
Q ss_pred ecc
Q 018675 348 LAN 350 (352)
Q Consensus 348 ~~~ 350 (352)
+..
T Consensus 327 ~~~ 329 (388)
T 3pe7_A 327 MKN 329 (388)
T ss_dssp TTT
T ss_pred ccC
Confidence 764
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.49 E-value=1.2e-10 Score=103.02 Aligned_cols=272 Identities=11% Similarity=0.057 Sum_probs=152.7
Q ss_pred CCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe----------CCCcEEEEEccCCceeeeEeecc
Q 018675 47 GDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLEG 116 (352)
Q Consensus 47 ~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~i~~~~~~~~~~~~~~~~ 116 (352)
.|++|.+||..+++... .+. .+..+ .++|+|||+++.++. .++.|.+||..+.+ .+..+..
T Consensus 29 ~d~~v~v~D~~t~~~~~----~i~-~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLG----MVP-TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--FEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCCEEE----EEE-CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--EEEEEEE
T ss_pred ccCeEEEEECCCCeEEE----Eec-CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--EEEEEEc
Confidence 47899999987765322 121 13334 889999999988876 25679999976553 2333321
Q ss_pred ------ccCCeeEEEECCCCcEEEEeeC--CCcEEEEecCCCCeeEEEEE-eecCccCeeEEEEcCCC-CEEEEEeCCCc
Q 018675 117 ------HENEVKSVSWNASGTLLATCGR--DKSVWIWEVMPGNEFECVSV-LQGHAQDVKMVQWHPTM-DVLFSCSYDNT 186 (352)
Q Consensus 117 ------h~~~v~~v~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~d~~ 186 (352)
+......++++|+|++|+++.. +++|.+||+...+ .+.. +. . .....+.+.|++ ..+++.+.|+.
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~---~~~~~i~-~-~~~~~v~~~p~~~~~~~~~~~dg~ 174 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD---YVEDVTA-A-AGCWSVIPQPNRPRSFMTICGDGG 174 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE---EEEEEGG-G-TTEEEEEECTTSSSEEEEEETTSS
T ss_pred CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc---EEEEEec-C-CCcceeEEcCCCCeeEEEECCCCc
Confidence 2245678999999999988864 6899999987553 2333 22 1 122235566765 57788889999
Q ss_pred EEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeE---Ee
Q 018675 187 IKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLC---TI 263 (352)
Q Consensus 187 i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~ 263 (352)
+.+|+....... ....... ........++ .+.++|++..++..+.++.+.++|+....... ...+.... ..
T Consensus 175 ~~~v~~~~~g~~-~~~~~~~-~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~---~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 175 LLTINLGEDGKV-ASQSRSK-QMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKV---DGPWSLLNDEDKA 248 (361)
T ss_dssp EEEEEECTTSSE-EEEEECC-CCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEE---EEEEESCCHHHHH
T ss_pred EEEEEECCCCcE-eeecccc-ceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCcee---cccccccCccccc
Confidence 988876432110 0000000 0011111122 23345677777777788999999874211100 00000000 00
Q ss_pred ecccCcceEEEEecCC-ceE-EecC----------CCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 264 SGYHDRTIFSVHWSRE-GII-ASGA----------ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 264 ~~~~~~~i~~~~~~~~-~~~-~s~~----------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
..........+.++++ +.+ ++.. ..+.+.+|+.... +.+.....+. ..+++|+|+++
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---------~~v~~i~~~~--p~~ia~spdg~ 317 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---------QRVARIPGRD--ALSMTIDQQRN 317 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---------EEEEEEECTT--CCEEEEETTTT
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC---------cEEEEEecCC--eeEEEECCCCC
Confidence 0000000111344554 333 3222 1346888865432 2233334444 99999999998
Q ss_pred ceEEEecCCCeEEEEeeccC
Q 018675 332 RLLASASDDGMIKIWELANT 351 (352)
Q Consensus 332 ~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.++ +++. ++|.|||.+..
T Consensus 318 ~l~-v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 318 LML-TLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEE-EECS-SCEEEEECSSS
T ss_pred EEE-EeCC-CeEEEEECCCC
Confidence 655 4554 99999998753
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.47 E-value=1.9e-10 Score=98.63 Aligned_cols=239 Identities=14% Similarity=0.103 Sum_probs=152.0
Q ss_pred eeecCCccceEEEEEccCCCCCCCcc-EEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAP-VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~-~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
..+..+.....+++|+|+ +. +++++..++.|..|+..++ ... + ..+...+.+++++|+|+++++..
T Consensus 21 ~~l~~~~~~~eg~~~d~~------g~~l~~~~~~~~~i~~~~~~~~--~~~----~-~~~~~~~~~l~~~~dg~l~v~~~ 87 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPA------RSAVIFSDVRQNRTWAWSDDGQ--LSP----E-MHPSHHQNGHCLNKQGHLIACSH 87 (296)
T ss_dssp EEEECCCSSEEEEEEEGG------GTEEEEEEGGGTEEEEEETTSC--EEE----E-ESSCSSEEEEEECTTCCEEEEET
T ss_pred EEEecCCccccCCeEeCC------CCEEEEEeCCCCEEEEEECCCC--eEE----E-ECCCCCcceeeECCCCcEEEEec
Confidence 344456677889999997 44 7888888999999998765 111 1 12456789999999999888777
Q ss_pred CCCcEEEEEccCCceeeeEee-cc-ccCCeeEEEECCCCcEEEEeeC-----------------CCcEEEEecCCCCeeE
Q 018675 94 FDATTCIWEDVGGDYECVATL-EG-HENEVKSVSWNASGTLLATCGR-----------------DKSVWIWEVMPGNEFE 154 (352)
Q Consensus 94 ~d~~i~i~~~~~~~~~~~~~~-~~-h~~~v~~v~~~~~~~~l~s~~~-----------------d~~v~vwd~~~~~~~~ 154 (352)
.++.|.+|+..+++....... .+ ....++.++++|+|+++++.+. .+.|..++.. ..
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~-- 163 (296)
T 3e5z_A 88 GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GT-- 163 (296)
T ss_dssp TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SC--
T ss_pred CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CC--
Confidence 778999998766654332211 11 1235678999999998887321 2344444432 22
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc-eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW-HCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~-~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
...+..+......++|+|+++.+++.+.++.|.+|++... ... .....+ . .+...+..++++++|+++++.
T Consensus 164 -~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~--g~~~~~~~~~-~---~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 164 -LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNAR--GETEYQGVHF-T---VEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp -EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSS--SCEEEEEEEE-C---CSSSCCCSEEEBTTSCEEEEE-
T ss_pred -EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCC--CcCcCCCeEe-e---CCCCCCCeEEECCCCCEEEEc-
Confidence 2223445556788999999998877777889999987521 111 111112 1 233455678999999987777
Q ss_pred CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEe-cCCc-eEEecCCCCeEEE
Q 018675 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHW-SREG-IIASGAADDSVQF 293 (352)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~s~~~d~~v~~ 293 (352)
++.|.+|+.+.. ....+. .+.. +.++.+ .+++ .|..++.++..++
T Consensus 236 -~~~v~~~~~~g~------------~~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 236 -GDGVHVLTPDGD------------ELGRVL-TPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp -TTEEEEECTTSC------------EEEEEE-CSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred -CCeEEEECCCCC------------EEEEEE-CCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 788999986411 111121 1223 666777 4554 5666655544433
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.47 E-value=1e-10 Score=103.37 Aligned_cols=280 Identities=10% Similarity=0.053 Sum_probs=162.4
Q ss_pred eeeecCCccceEEEEEccCCCCCCCccEEEEee----------CCCeEEEEecCCCceeeeeeeeee-cceecceEEEEE
Q 018675 14 IQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCS----------GDKTVRIWEQSASSRFWNCKAVLE-EMHTRTVRSCAW 82 (352)
Q Consensus 14 ~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s----------~D~~v~~w~~~~~~~~~~~~~~~~-~~h~~~v~~~~~ 82 (352)
+.++..+... .++|+|+ +++++.+. .|++|.+||..+.+........-. ..+......++|
T Consensus 44 ~~~i~~g~~p--~i~~spd------g~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~ 115 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSND------GKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQ 115 (361)
T ss_dssp EEEEECCEEE--EEEECTT------SSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEE
T ss_pred EEEecCCCCC--ceEECCC------CCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEE
Confidence 4455555555 7899997 46777765 367899999876543322111000 001234567899
Q ss_pred CCCCCEEEEEeC--CCcEEEEEccCCceeeeEe-eccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeE-EEE
Q 018675 83 SPSGKLLATASF--DATTCIWEDVGGDYECVAT-LEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFE-CVS 157 (352)
Q Consensus 83 s~~~~~l~s~~~--d~~i~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~-~~~ 157 (352)
+|||++|.++.. +++|.+||..+++ .+.. +. .. ....+.+.|++ ..+++.+.|+++.+|++....... ...
T Consensus 116 spdg~~l~v~n~~~~~~v~v~d~~~~~--~~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~ 191 (361)
T 2oiz_A 116 TTDGKFIVLQNASPATSIGIVDVAKGD--YVEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSR 191 (361)
T ss_dssp CTTSSEEEEEEESSSEEEEEEETTTTE--EEEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEE
T ss_pred CCCCCEEEEECCCCCCeEEEEECCCCc--EEEEEec-CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeecc
Confidence 999999988764 5789999987663 3444 33 21 22335567765 678889999999999975422211 111
Q ss_pred ---EeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccC-----CCC-cccEEEEEEcCCCCE
Q 018675 158 ---VLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESN-----NGH-SSTIWALSFNAKGDK 228 (352)
Q Consensus 158 ---~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~-----~~h-~~~i~~l~~~~~~~~ 228 (352)
.+..+... ..+.++|++..++..+.++.+.++++..... .....+.... .+. ......++|+|++..
T Consensus 192 ~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 192 SKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEV---KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp CCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSC---EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred ccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCc---eecccccccCccccccccccCCeeEEEEecCCCe
Confidence 11111111 1223356677777777889999998753211 1111111000 000 011112688999777
Q ss_pred EEEEeC-----------CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 229 LVSCSD-----------DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 229 l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
+..... .+.|.+||+... +....+... . +..+.+++++ ++++++. +.+.+|+.
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~-----------~~v~~i~~~-~--p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTK-----------QRVARIPGR-D--ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTT-----------EEEEEEECT-T--CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCC-----------cEEEEEecC-C--eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 665432 347999997532 223333322 2 7888999876 5555555 99999965
Q ss_pred cCCccccCcccceeeecccccCcceeEEEecCCCc
Q 018675 297 SKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGER 331 (352)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~ 331 (352)
....+ +++.....+...-..++++|+|+
T Consensus 333 ~t~~l-------~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 333 SQPEP-------KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SSSSC-------EEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCcc-------eeeEEeccCCCCcEEEEecCCCC
Confidence 43210 12233335566778899999875
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.46 E-value=1e-10 Score=98.71 Aligned_cols=238 Identities=7% Similarity=-0.039 Sum_probs=152.7
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE
Q 018675 76 TVRSCAWSPSGKLLA-TASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~-s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 154 (352)
...+++++++|++++ +...++.|.+|+..+.... .....+...+.++++.++++++++.. ++.|.+||..... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~-~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT--VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN-QT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E--ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC-CE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc--eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce-Ee
Confidence 567889999999777 5467889999975443211 11122335678999999998776665 8899999975332 11
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~ 234 (352)
............+++.|++.++++...++.|.+|+..... ..... ......+..++++|+|+++++...
T Consensus 101 --~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~-----~~~~~----~~~~~~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 101 --VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT-----QTVLP----FTGLNDPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp --ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS-----CEECC----CCSCCSCCCEEECTTCCEEEEEGG
T ss_pred --eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce-----eEeec----cccCCCceeEEEeCCCCEEEEECC
Confidence 1111222467889999999877777778889988532211 11101 112235678999999998888877
Q ss_pred CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeec
Q 018675 235 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313 (352)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
++.|.+|+.+...... ........+..+++++++ .+++...++.+..|+...... ...
T Consensus 170 ~~~i~~~~~~~~~~~~------------~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~---------~~~ 228 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVV------------LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS---------TVL 228 (270)
T ss_dssp GTEEEEECTTTCCEEE------------CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC---------EEC
T ss_pred CCEEEEEecCCCceEe------------ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc---------eee
Confidence 8899999865321110 000111456778888876 455556677888886533111 111
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeEEEEeecc
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 350 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~ 350 (352)
...+...+.+++++|+++ ++++...++.|++++...
T Consensus 229 ~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCG
T ss_pred ccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCC
Confidence 122335689999999985 888899999999998754
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=4.8e-11 Score=104.09 Aligned_cols=244 Identities=9% Similarity=0.044 Sum_probs=154.5
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 154 (352)
..|.++.|++++..++..+.++.++.|. + .....+..+...+.+++|++++++++++..++.|.+||...+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~- 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---A--EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK- 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---C--EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-
T ss_pred cccceeeecCCccceeEEeecccCcccc---c--ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE-
Confidence 3467778888887777777788888883 1 234455566677899999999998888888999999997654321
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCC----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
.....+...+.++.++|++.++++...+ +.|.+|+..... .. ..+.. ..+...+..+.++|+|++++
T Consensus 80 --~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~---~~--~~~~~--~~~~~~~~~i~~d~~g~l~v 150 (333)
T 2dg1_A 80 --RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN---LQ--DIIED--LSTAYCIDDMVFDSKGGFYF 150 (333)
T ss_dssp --EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS---CE--EEECS--SSSCCCEEEEEECTTSCEEE
T ss_pred --EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE---EE--EEEcc--CccCCcccceEECCCCCEEE
Confidence 2222455678999999999887777666 688888754321 11 01111 12345789999999999888
Q ss_pred EEeC------CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecCCCCeEEEEEccCC-cc
Q 018675 231 SCSD------DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGAADDSVQFFVESKD-DL 301 (352)
Q Consensus 231 s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~v~~~~~~~~-~~ 301 (352)
+... .+.|..++.+.... ... .. ....+..+.+++++ ++++...++.+.+|+.... ..
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~---------~~~---~~-~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~ 217 (333)
T 2dg1_A 151 TDFRGYSTNPLGGVYYVSPDFRTV---------TPI---IQ-NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVT 217 (333)
T ss_dssp EECCCBTTBCCEEEEEECTTSCCE---------EEE---EE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSS
T ss_pred EeccccccCCCceEEEEeCCCCEE---------EEe---ec-CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcC
Confidence 7654 24455554321111 111 00 11235678888876 3455556788988876421 11
Q ss_pred ccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 302 IDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 302 ~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
... ..........++ ..+..+++++++. ++++...++.|.+|+..
T Consensus 218 ~~~-~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 218 IQP-FGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEE-EEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTT
T ss_pred ccc-ccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCC
Confidence 100 000111111223 4678899999986 67777778999999864
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.42 E-value=2.8e-10 Score=99.66 Aligned_cols=222 Identities=11% Similarity=0.112 Sum_probs=137.6
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCC---Ce--EEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC-
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGD---KT--VRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD- 95 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D---~~--v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d- 95 (352)
..+.++.|+|+ ++.||.++.+ +. |.+|++.+++. .... . +.. +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpD------g~~la~~~~~~~~~~~~l~~~~~~~g~~----~~l~-~-~~~-~~~~~wspdg~~l~~~~~~~ 125 (347)
T 2gop_A 59 ENATMPRISPD------GKKIAFMRANEEKKVSEIWVADLETLSS----KKIL-E-AKN-IRSLEWNEDSRKLLIVGFKR 125 (347)
T ss_dssp ESCEEEEECTT------SSEEEEEEEETTTTEEEEEEEETTTTEE----EEEE-E-ESE-EEEEEECTTSSEEEEEEECC
T ss_pred ccCCCeEECCC------CCEEEEEEeccCCCcceEEEEECCCCce----EEEE-c-CCC-ccceeECCCCCEEEEEEccC
Confidence 45778999997 5677777654 34 55666665432 1111 1 223 8899999999998887643
Q ss_pred --------------------------CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC-------cE
Q 018675 96 --------------------------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK-------SV 142 (352)
Q Consensus 96 --------------------------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-------~v 142 (352)
..+.+|+..+++. +..+.. . .+..+.|+|+| +++++..+. ..
T Consensus 126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~ 200 (347)
T 2gop_A 126 REDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFW 200 (347)
T ss_dssp CC---------CCCC---------CEEEEEEEETTTTEE--EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCE
T ss_pred CCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--EeeecC-C-CcccccCCCCe-EEEEEecccccccccccc
Confidence 4577888766643 122222 3 78899999999 777776542 44
Q ss_pred EEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC--------cEEEEecCCCCCCCceeEeeeeccCCCCc
Q 018675 143 WIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--------TIKVWWAEDTDSDNWHCVQTISESNNGHS 214 (352)
Q Consensus 143 ~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~--------~i~iw~~~~~~~~~~~~~~~~~~~~~~h~ 214 (352)
.+|.+. ...... +..+ ..+.. ++|+++.++.++.+. .|.+|+ .. . ...+ ..++.
T Consensus 201 ~l~~~d-~~~~~~---l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~---~---~~~l---~~~~~ 262 (347)
T 2gop_A 201 DIYIWE-DGKEEK---MFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GK---E---VMGI---LDEVD 262 (347)
T ss_dssp EEEEEE-TTEEEE---EEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SS---C---EEES---STTCC
T ss_pred cEEEeC-CCceEE---eccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CC---c---eEec---cccCC
Confidence 566554 333222 2223 33443 389999887776543 566665 11 1 1112 22455
Q ss_pred ccEEE-EEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeE-E
Q 018675 215 STIWA-LSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSV-Q 292 (352)
Q Consensus 215 ~~i~~-l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v-~ 292 (352)
..+.. +.|+ ++ ++++++.++.+++| ++ .. .. ..+.. ....+..+++++ .++++++.++.. .
T Consensus 263 ~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~-~g----------~~-~~~~~-~~~~v~~~~~s~-~~~~~~~~~~~~~~ 325 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW-DG----------EI-KPIAK-GRHWIMGFDVDE-IVVYLKETATRLRE 325 (347)
T ss_dssp SEEEEEEEET-TE-EEEEEEETTEEEEE-EE-SS----------SE-EEEEC-SSSEEEEEEESS-SEEEEEECSSSCCE
T ss_pred cccCCccEEc-Cc-EEEEEecCCcEEEE-Ec-CC----------ce-EEEec-CCCeEEeeeeeC-cEEEEEcCCCChHH
Confidence 67776 8999 88 88899999999999 75 11 01 11111 245678888988 777777666654 6
Q ss_pred EEEc
Q 018675 293 FFVE 296 (352)
Q Consensus 293 ~~~~ 296 (352)
+|..
T Consensus 326 l~~~ 329 (347)
T 2gop_A 326 LFTW 329 (347)
T ss_dssp EEEE
T ss_pred heEe
Confidence 6643
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.40 E-value=1.3e-09 Score=93.87 Aligned_cols=210 Identities=9% Similarity=0.071 Sum_probs=127.6
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEE-------eeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCE
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFAS-------CSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKL 88 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s-------~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~ 88 (352)
+.+......+++|.|+ +.++++ ...++.|.+|+..+++.. .....-...+...+..++++++ |++
T Consensus 13 ~~~~~~~~~~~~~~~~------g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l 85 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKN------GDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQL 85 (314)
T ss_dssp EECCCTTCEEEEECTT------SCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEE
T ss_pred hhccCCCccCceECCC------CCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcE
Confidence 3444556788999875 456777 677899999997655321 1100000113457889999999 776
Q ss_pred EEEEeCCCcEEEEEccCCceeee-Eee-cc-ccCCeeEEEECCCCcEEEEeeCC---------------CcEEEEecCCC
Q 018675 89 LATASFDATTCIWEDVGGDYECV-ATL-EG-HENEVKSVSWNASGTLLATCGRD---------------KSVWIWEVMPG 150 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~~~~~-~~~-~~-h~~~v~~v~~~~~~~~l~s~~~d---------------~~v~vwd~~~~ 150 (352)
+++.. .+.+.+|+.. ++.... ... .+ ....+.++++.++++++++...+ +.|..++.. +
T Consensus 86 ~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (314)
T 1pjx_A 86 FVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G 162 (314)
T ss_dssp EEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred EEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence 65544 4478888876 543222 111 11 12358899999999988877655 456666643 2
Q ss_pred CeeEEEEEeecCccCeeEEEEc----CCCCEEEEE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCc-ccEEEEEEcC
Q 018675 151 NEFECVSVLQGHAQDVKMVQWH----PTMDVLFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHS-STIWALSFNA 224 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~----~~~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~l~~~~ 224 (352)
. ... +..+......++++ |+++.++.+ ..++.|.+|+.... ........+. ...++. ..+..+++++
T Consensus 163 ~-~~~---~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~--g~~~~~~~~~-~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 163 Q-MIQ---VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP--AKIENKKVWG-HIPGTHEGGADGMDFDE 235 (314)
T ss_dssp C-EEE---EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET--TEEEEEEEEE-ECCCCSSCEEEEEEEBT
T ss_pred C-EEE---eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC--CccccceEEE-ECCCCCCCCCCceEECC
Confidence 2 221 12223345788899 988665544 56788999975411 1111111111 112232 4577899999
Q ss_pred CCCEEEEEeCCCcEEEEcC
Q 018675 225 KGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 225 ~~~~l~s~~~dg~i~iwd~ 243 (352)
+|.++++...++.|.+|+.
T Consensus 236 ~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp TCCEEEEEETTTEEEEECT
T ss_pred CCCEEEEEcCCCEEEEEcC
Confidence 9998888878888998875
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.39 E-value=3.1e-09 Score=99.08 Aligned_cols=286 Identities=12% Similarity=0.038 Sum_probs=169.4
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
..++++...|++|.++|..+.+...... ....+..+.|+|||+++.+++.|+.+.+||....+...+..+.. .
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~------~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G 239 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLD------TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-G 239 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEE------CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-C
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEe------CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-C
Confidence 4577888889999999998875432221 12345688999999999999999999999974112233444443 2
Q ss_pred CCeeEEEEC----CCCcEEEEee-CCCcEEEEecCCCCeeEEEEEeec-------Ccc-CeeEEEEcCCCCE-EEEEeCC
Q 018675 119 NEVKSVSWN----ASGTLLATCG-RDKSVWIWEVMPGNEFECVSVLQG-------HAQ-DVKMVQWHPTMDV-LFSCSYD 184 (352)
Q Consensus 119 ~~v~~v~~~----~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~-------h~~-~v~~~~~~~~~~~-l~s~~~d 184 (352)
.....++|+ |+|++++++. .++++.++|....+..+.+..... |.. .+..+..++++.. ++....+
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 346789999 6999877665 458999999765554433322110 222 4667777887664 4455567
Q ss_pred CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCcEEEEcCCccccccCCCCccceeeEE-
Q 018675 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGADITRMQSGDGYASWRHLCT- 262 (352)
Q Consensus 185 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~- 262 (352)
+.|.+++..... . .....+. .......+.|+|++++++++. .++.|.++|++..+.... +..
T Consensus 320 g~v~~vd~~~~~--~-~~v~~i~-----~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~--------i~vg 383 (567)
T 1qks_A 320 GKILLVDYTDLN--N-LKTTEIS-----AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI--------EDTG 383 (567)
T ss_dssp TEEEEEETTCSS--E-EEEEEEE-----CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE--------EECS
T ss_pred CeEEEEecCCCc--c-ceeeeee-----ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE--------Eecc
Confidence 889888765432 1 1122222 224466789999999876654 678999999864332110 000
Q ss_pred eecccCcceEEEEecCC-c-eEEec-CCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecC
Q 018675 263 ISGYHDRTIFSVHWSRE-G-IIASG-AADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASD 339 (352)
Q Consensus 263 ~~~~~~~~i~~~~~~~~-~-~~~s~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~ 339 (352)
-...|...-..+ +.++ + .+++. ..+++|.+++.....-. ...++ .+++.......-.-+..+|++++++++...
T Consensus 384 g~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~-~~~~k-vv~~i~~~g~g~~~i~~~p~~~~l~v~~~~ 460 (567)
T 1qks_A 384 GQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHP-DNAWK-ILDSFPALGGGSLFIKTHPNSQYLYVDATL 460 (567)
T ss_dssp SSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT-TTBTS-EEEEEECSCSCCCCEECCTTCSEEEEECTT
T ss_pred CcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCc-cccCE-EEEEEecCCCCCEEEEeCCCCCeEEEecCC
Confidence 000121111112 2443 4 33443 35688888865431100 00011 222222222222446789999888876532
Q ss_pred ------CCeEEEEeecc
Q 018675 340 ------DGMIKIWELAN 350 (352)
Q Consensus 340 ------Dg~i~iw~~~~ 350 (352)
.+.|.|+|+.+
T Consensus 461 ~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 461 NPEAEISGSVAVFDIKA 477 (567)
T ss_dssp CSSHHHHTCEEEEEGGG
T ss_pred CCCcccCceEEEEECCc
Confidence 35899999864
No 188
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=4.1e-10 Score=109.18 Aligned_cols=248 Identities=16% Similarity=0.115 Sum_probs=148.7
Q ss_pred eecceEEEEECCCCCEEEEEeCC-----CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCc------
Q 018675 73 HTRTVRSCAWSPSGKLLATASFD-----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKS------ 141 (352)
Q Consensus 73 h~~~v~~~~~s~~~~~l~s~~~d-----~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~------ 141 (352)
|...+...+|||||++||.++.+ ..|++||..+++.... .. +...+..++|+|+ +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-EL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EE--EEEESCCCEESTT-SEEEEEECCCC------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cC--CCceeccEEEECC-CEEEEEEecCccccccc
Confidence 44468889999999999887654 3599999887754221 11 1222357899999 88888877654
Q ss_pred --------EEEEecCCCCee-EEEEEeecCccCeeEEEEcCCCCEEEEEeCCC-----cEEEEecCCCCCCCceeEeeee
Q 018675 142 --------VWIWEVMPGNEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TIKVWWAEDTDSDNWHCVQTIS 207 (352)
Q Consensus 142 --------v~vwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~~~~~~~ 207 (352)
|.+|++..+... ..+.....+...+..+.|+|++++++..+.++ .|.+|++.......+. .+.
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~---~l~ 313 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT---ALI 313 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE---EEE
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE---Eec
Confidence 888887543321 12222222333578899999999888776543 7888876542100011 222
Q ss_pred ccCCCCcccEEEEEEcCCCCEEEEEeCC----CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEE
Q 018675 208 ESNNGHSSTIWALSFNAKGDKLVSCSDD----LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIA 283 (352)
Q Consensus 208 ~~~~~h~~~i~~l~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 283 (352)
. +...+... ++|+|+.|+..+.+ +.|.+|+++... ..|+ .+...+...+..+.+..+.+++
T Consensus 314 ~----~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------~~~~---~l~~~~~~~l~~~~~~~~~lv~ 378 (741)
T 1yr2_A 314 P----DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-------PRFD---TVVPESKDNLESVGIAGNRLFA 378 (741)
T ss_dssp C----SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-------CEEE---EEECCCSSEEEEEEEEBTEEEE
T ss_pred C----CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-------cccE---EEecCCCCeEEEEEEECCEEEE
Confidence 1 12222333 34888888777653 458888764210 1122 2222334446667777666788
Q ss_pred ecCCCCeEEEEEccCCccccCcccceeeeccc-ccCcceeEEEecCCCcceEEEec---CCCeEEEEeecc
Q 018675 284 SGAADDSVQFFVESKDDLIDGPSYKMLLKKEK-AHDMDVNSVQWSPGERRLLASAS---DDGMIKIWELAN 350 (352)
Q Consensus 284 s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~sp~~~~~l~s~~---~Dg~i~iw~~~~ 350 (352)
+...++..++|..... +. . ..... .+.+.+..++++|+++.++++.+ ..++|.+||+..
T Consensus 379 ~~~~dg~~~l~~~~~~----g~---~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 379 SYIHDAKSQVLAFDLD----GK---P-AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEETTEEEEEEEETT----SC---E-EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEECCEEEEEEEeCC----CC---c-eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 8888998888755321 11 1 11122 23567899999998875554433 447899998754
No 189
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.39 E-value=4.2e-08 Score=83.62 Aligned_cols=283 Identities=7% Similarity=0.001 Sum_probs=177.8
Q ss_pred cCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCc
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
........++.+.++ +.++++...++.|.+|+.. +. +... .. ......+..++++++|++.++...++.
T Consensus 16 ~~~~~~p~~i~~d~~------g~l~v~~~~~~~v~~~~~~-~~-~~~~--~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~ 84 (300)
T 2qc5_A 16 SIPDSGPYGITSSED------GKVWFTQHKANKISSLDQS-GR-IKEF--EV-PTPDAKVMCLIVSSLGDIWFTENGANK 84 (300)
T ss_dssp SSTTCCEEEEEECTT------SCEEEEETTTTEEEEECTT-SC-EEEE--EC-SSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred CCCCCCcceeeECCC------CCEEEEcCCCCeEEEECCC-Cc-eEEE--EC-CCCCCcceeEEECCCCCEEEEecCCCe
Confidence 345568889999886 4577776678999999876 32 1111 11 112356889999999998887766788
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
+..++.. +... ...+......+.++++.+++.++++...++.|..+|.. +.. .. ..+......+..+.+.+++.+
T Consensus 85 v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~-~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 85 IGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI-YE-YDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp EEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE-EE-EECSSTTCCEEEEEECTTSSE
T ss_pred EEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE-EE-ccCCCCCCCceeEEECCCCCE
Confidence 9998865 4432 22233234678899999999988877777889999865 332 11 112223456788999999986
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccc
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASW 257 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (352)
.++...++.|..++... ... .+. ...+...+..+.++++|.++++....+.|.+|+... ..
T Consensus 160 ~v~~~~~~~i~~~~~~g----~~~---~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~--------- 220 (300)
T 2qc5_A 160 WFTENQNNSIGRITNTG----KLE---EYP--LPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG-EI--------- 220 (300)
T ss_dssp EEEETTTTEEEEECTTC----CEE---EEE--CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-CE---------
T ss_pred EEEecCCCeEEEECCCC----cEE---Eee--CCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC-cE---------
Confidence 66666677888886521 111 111 112345688999999998888777778899997521 11
Q ss_pred eeeEEeecccCcceEEEEecCCce-EEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEE
Q 018675 258 RHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLAS 336 (352)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s 336 (352)
.. ... ......+..+..++++. +++...++.+..++... .. .. .........+.++++.+++. ++++
T Consensus 221 ~~-~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~------~~--~~~~~~~~~~~~i~~~~~g~-l~v~ 288 (300)
T 2qc5_A 221 SE-YDI-PTPNARPHAITAGKNSEIWFTEWGANQIGRITNDN-TI------QE--YQLQTENAEPHGITFGKDGS-VWFA 288 (300)
T ss_dssp EE-EEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-CE------EE--EECCSTTCCCCCEEECTTSC-EEEE
T ss_pred EE-EEC-CCCCCCceEEEECCCCCEEEeccCCCeEEEECCCC-cE------EE--EECCccCCccceeEeCCCCC-EEEE
Confidence 00 001 11234567788887764 44444567888875421 11 01 11122345688999999886 5655
Q ss_pred ecCCCeEEEEeec
Q 018675 337 ASDDGMIKIWELA 349 (352)
Q Consensus 337 ~~~Dg~i~iw~~~ 349 (352)
.. . .|..++..
T Consensus 289 ~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 289 LK-C-KIGKLNLN 299 (300)
T ss_dssp CS-S-EEEEEEEC
T ss_pred cc-C-ceEEeCCC
Confidence 54 4 66666653
No 190
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=5.9e-12 Score=111.13 Aligned_cols=183 Identities=11% Similarity=0.025 Sum_probs=125.4
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeee-----eeeeeecceecceEEEEECCCCCEEEEEeCCCc
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWN-----CKAVLEEMHTRTVRSCAWSPSGKLLATASFDAT 97 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 97 (352)
.++.+++++.. .++++|+.| .+++|+......... ........+.. |+.++| |++.|+++ .++.
T Consensus 39 ~~nlLais~~~------gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSK------SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTT------TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSE
T ss_pred cccEEEEcCCC------CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCc
Confidence 58889999874 578888887 555697543220000 01101122456 999999 99999998 8899
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
+++||..... .......|...+.++.+.+. .+++++.||+|.+||+..+... . +...|++++|+|.+
T Consensus 108 l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~---~----~~~~Vs~v~WSpkG-- 174 (388)
T 1xip_A 108 LYSLDLEELS--EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK---Q----LAQNVTSFDVTNSQ-- 174 (388)
T ss_dssp EEEEESSSTT--CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE---E----EEESEEEEEECSSE--
T ss_pred EEEEEchhhh--ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc---c----ccCCceEEEEcCCc--
Confidence 9999976543 12234556778888877653 3888999999999999755431 1 34589999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceeEeeee-----ccCCCCcccEEEEEEcCCCCEEEEE
Q 018675 178 LFSCSYDNTIKVWWAEDTDSDNWHCVQTIS-----ESNNGHSSTIWALSFNAKGDKLVSC 232 (352)
Q Consensus 178 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~-----~~~~~h~~~i~~l~~~~~~~~l~s~ 232 (352)
++.|..||.+++|+........ ..++. ....+|...|.+|.|.+++.++++=
T Consensus 175 ~~vg~~dg~i~~~~~~~~~~~~---k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 175 LAVLLKDRSFQSFAWRNGEMEK---QFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEETTSCEEEEEEETTEEEE---EEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred eEEEEcCCcEEEEcCCCccccc---cceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 6789999999999654321000 12221 1112467889999999999988873
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.38 E-value=6.9e-10 Score=93.52 Aligned_cols=235 Identities=12% Similarity=0.050 Sum_probs=151.2
Q ss_pred ceEEEEEccCCCCCCCccEEE-EeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFA-SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~-s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~ 101 (352)
...++++.|+ +.+++ +.+.++.|.+|+..+.... .....+...+.+++++++|+++++.. ++.|.+|
T Consensus 25 ~p~~i~~~~~------g~l~v~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~ 92 (270)
T 1rwi_B 25 SPSGVAVDSA------GNVYVTSEGMYGRVVKLATGSTGTT-----VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTL 92 (270)
T ss_dssp CEEEEEECTT------CCEEEEECSSSCEEEEECC-----E-----ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEE
T ss_pred CccceEECCC------CCEEEEccCCCCcEEEecCCCcccc-----eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEE
Confidence 6778999886 45677 5577899999987543211 11111224578899999999776665 8889999
Q ss_pred EccCCceeeeEeec-cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEE
Q 018675 102 EDVGGDYECVATLE-GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180 (352)
Q Consensus 102 ~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 180 (352)
+..+.... .+. .....+..+++.+++.++++...++.|.+|+...... .............++++|++.++++
T Consensus 93 d~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 93 AAGSNNQT---VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ---TVLPFTGLNDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp CTTCSCCE---ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC---EECCCCSCCSCCCEEECTTCCEEEE
T ss_pred eCCCceEe---eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee---EeeccccCCCceeEEEeCCCCEEEE
Confidence 86554321 221 2235688999999999888877788899997532221 1111222335678999999987777
Q ss_pred EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceee
Q 018675 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHL 260 (352)
Q Consensus 181 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 260 (352)
...++.|.+|+..... ... . ...+...+..|+++++|.++++...++.|.+|+.+.....
T Consensus 167 ~~~~~~i~~~~~~~~~-----~~~-~---~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~----------- 226 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNN-----QVV-L---PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST----------- 226 (270)
T ss_dssp EGGGTEEEEECTTTCC-----EEE-C---CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE-----------
T ss_pred ECCCCEEEEEecCCCc-----eEe-e---cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce-----------
Confidence 7778899999754321 111 1 1122356889999999988888878899999986432110
Q ss_pred EEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEc
Q 018675 261 CTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVE 296 (352)
Q Consensus 261 ~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~ 296 (352)
.........+..+++++++ .+++...++.|+++..
T Consensus 227 -~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 227 -VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp -ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred -eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 0000112356778888765 5667777888888843
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.38 E-value=2.3e-11 Score=108.51 Aligned_cols=235 Identities=8% Similarity=0.003 Sum_probs=133.7
Q ss_pred cceEEEEECCCCCEEEEEeCC-C--cEEEEEccCCceeeeEeeccccCC-eeEEEECCCCcEEEEeeCCCcEEEEecCCC
Q 018675 75 RTVRSCAWSPSGKLLATASFD-A--TTCIWEDVGGDYECVATLEGHENE-VKSVSWNASGTLLATCGRDKSVWIWEVMPG 150 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d-~--~i~i~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~ 150 (352)
..+..++|+|||+.|+..... + .+.+|+..+++.. .+..+... ...+.|+|+|+.|+.++.++.|.+||+..+
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV---QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE---ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE---EeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCC
Confidence 346778899999998877553 3 5777777665432 22222333 334789999999999999999999998765
Q ss_pred CeeEEEEEeecCccCeeE-------------------EEEcCCCCEEEEE-----eCCCcEEEEecCCCCCCCceeEeee
Q 018675 151 NEFECVSVLQGHAQDVKM-------------------VQWHPTMDVLFSC-----SYDNTIKVWWAEDTDSDNWHCVQTI 206 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~l~s~-----~~d~~i~iw~~~~~~~~~~~~~~~~ 206 (352)
... .....+...... ..|+|+++.++.+ ..+..|.+|++.... . ..+
T Consensus 113 ~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~---~---~~~ 183 (396)
T 3c5m_A 113 EEQ---VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE---L---EVI 183 (396)
T ss_dssp CEE---EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC---E---EEE
T ss_pred CcE---EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc---E---Eee
Confidence 432 122222211111 2356666654433 345678888765422 1 111
Q ss_pred eccCCCCcccEEEEEEcC-CCCEEEEEeCC------CcEEEEcCCccccccCCCCccceeeEEeeccc-CcceEEEEecC
Q 018675 207 SESNNGHSSTIWALSFNA-KGDKLVSCSDD------LTIKIWGADITRMQSGDGYASWRHLCTISGYH-DRTIFSVHWSR 278 (352)
Q Consensus 207 ~~~~~~h~~~i~~l~~~~-~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~ 278 (352)
. .+...+..+.|+| ++..|+..+.+ ..|.+|+++..... .+.... ...+..+.|++
T Consensus 184 ~----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~------------~l~~~~~~~~~~~~~~sp 247 (396)
T 3c5m_A 184 H----QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR------------KIKEHAEGESCTHEFWIP 247 (396)
T ss_dssp E----EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE------------ESSCCCTTEEEEEEEECT
T ss_pred c----cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee------------EeeccCCCccccceEECC
Confidence 1 2345688899999 78877765543 35777765422110 011101 22466778998
Q ss_pred Cc-eEEecCCC-----CeEEEEEccCCccccCcccceeeecccccCcceeEEEecC-CCcceEEEec-------------
Q 018675 279 EG-IIASGAAD-----DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP-GERRLLASAS------------- 338 (352)
Q Consensus 279 ~~-~~~s~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-~~~~~l~s~~------------- 338 (352)
++ .++..+.+ +.+++|+...... .. +....+ .. ++|+| +++ +++.++
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~------~~-l~~~~~----~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETLEN------EE-VMVMPP----CS-HLMSNFDGS-LMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTCCE------EE-EEECCS----EE-EEEECSSSS-EEEEEECCC----------
T ss_pred CCCEEEEEecCCCCccceEEEEECCCCCe------EE-eeeCCC----CC-CCccCCCCc-eEEEecCCcceeecccccc
Confidence 76 34444332 3477775432111 11 111111 23 88999 987 455443
Q ss_pred ---CCCeEEEEeecc
Q 018675 339 ---DDGMIKIWELAN 350 (352)
Q Consensus 339 ---~Dg~i~iw~~~~ 350 (352)
.+..|.+|++..
T Consensus 315 ~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 315 NIENDPFLYVLNTKA 329 (396)
T ss_dssp CCCCCCEEEEEETTT
T ss_pred ccCCCCcEEEEeccc
Confidence 347899998754
No 193
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.34 E-value=7.5e-09 Score=88.75 Aligned_cols=207 Identities=12% Similarity=0.140 Sum_probs=130.1
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
.+..---+..|+|++ +.++++...++.|..|+..++... .+ .....+.+++++++|+++++ . ++.+
T Consensus 10 ~~~~~~Egp~w~~~~-----~~l~~~d~~~~~i~~~d~~~~~~~-----~~--~~~~~~~~i~~~~dG~l~v~-~-~~~l 75 (297)
T 3g4e_A 10 ENCRCGESPVWEEVS-----NSLLFVDIPAKKVCRWDSFTKQVQ-----RV--TMDAPVSSVALRQSGGYVAT-I-GTKF 75 (297)
T ss_dssp CCCSBEEEEEEETTT-----TEEEEEETTTTEEEEEETTTCCEE-----EE--ECSSCEEEEEEBTTSSEEEE-E-TTEE
T ss_pred cCCccccCCeEECCC-----CEEEEEECCCCEEEEEECCCCcEE-----EE--eCCCceEEEEECCCCCEEEE-E-CCeE
Confidence 344455588999864 357777778899999998765321 11 13457899999999996554 3 5678
Q ss_pred EEEEccCCceeeeEeecc--ccCCeeEEEECCCCcEEEEeeCC---------CcEEEEecCCCCeeEEEEEeecCccCee
Q 018675 99 CIWEDVGGDYECVATLEG--HENEVKSVSWNASGTLLATCGRD---------KSVWIWEVMPGNEFECVSVLQGHAQDVK 167 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d---------~~v~vwd~~~~~~~~~~~~~~~h~~~v~ 167 (352)
.+||..++....+..... ....++.+.+.|+|.++++...+ ..-.+|.+........ +..+.....
T Consensus 76 ~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~---~~~~~~~pn 152 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK---YFDQVDISN 152 (297)
T ss_dssp EEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE---EEEEESBEE
T ss_pred EEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE---Eeecccccc
Confidence 899877765544433221 12357889999999977655322 2345666543332222 122233457
Q ss_pred EEEEcCCCCEEE-EEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 168 MVQWHPTMDVLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 168 ~~~~~~~~~~l~-s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.++|+|+++.++ +.+.++.|..|+...... .......+. ....+......++++++|.+.++...++.|.+||.+
T Consensus 153 gi~~spdg~~lyv~~~~~~~i~~~~~d~~~G-~~~~~~~~~-~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSLSYSVDAFDYDLQTG-QISNRRSVY-KLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEEECTTTC-CEEEEEEEE-ECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred ceEEcCCCCEEEEecCCCCcEEEEeccCCCC-cccCcEEEE-ECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 899999998664 555678899997631111 111111111 111223457789999999988888888889999764
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.33 E-value=3.5e-09 Score=92.22 Aligned_cols=264 Identities=7% Similarity=-0.038 Sum_probs=157.0
Q ss_pred CCCeEEEEecCCCceeeeeeeee-ecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEE
Q 018675 47 GDKTVRIWEQSASSRFWNCKAVL-EEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125 (352)
Q Consensus 47 ~D~~v~~w~~~~~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~ 125 (352)
.+++|.+||..+++......... ..........+.+. ++++.++...++.+.++|..+++. +..+. .......++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~--~~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE--VGRIT-GFTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE--EEEEE-CCSSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE--EEEcC-CCCCCcEEE
Confidence 38999999998764211100000 00111335667764 456666666789999999877643 33443 345688999
Q ss_pred ECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc-----cCeeEEEEcCCCCEEEEEe--CCCcEEEEecCCCCCC
Q 018675 126 WNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA-----QDVKMVQWHPTMDVLFSCS--YDNTIKVWWAEDTDSD 198 (352)
Q Consensus 126 ~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~--~d~~i~iw~~~~~~~~ 198 (352)
+++++.++++...++.|.+||...... ...+.... .....+.+ . +..++.+. .++.|.++|....
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~---~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~--- 162 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEI---TGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETD--- 162 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEE---EEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTT---
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeE---EEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCC---
Confidence 988886555555889999999865432 22222111 13345566 3 44455544 4889999976542
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC----------CcEEEEcCCccccccCCCCccceeeEEeecccC
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD----------LTIKIWGADITRMQSGDGYASWRHLCTISGYHD 268 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (352)
....++.. ......+.++|+|++++++..+ +.|.++|....+. ...+.....
T Consensus 163 --~~~~~i~~-----g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v-----------~~~~~~~~g 224 (328)
T 3dsm_A 163 --KVVDELTI-----GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV-----------EKQFKFKLG 224 (328)
T ss_dssp --EEEEEEEC-----SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE-----------EEEEECCTT
T ss_pred --eEEEEEEc-----CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE-----------EEEEecCCC
Confidence 22333321 1234568899999988877654 7899998653221 111111112
Q ss_pred cceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEe----cCCCeE
Q 018675 269 RTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASA----SDDGMI 343 (352)
Q Consensus 269 ~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~----~~Dg~i 343 (352)
..+..+++++++ .+..+.. .+.+++.....+.. ... ...+......++++|++..++++. ..++.|
T Consensus 225 ~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~----~~~---~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V 295 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV----RPF---LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIV 295 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS----SCS---BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEE
T ss_pred CCceeEEEecCCCEEEEEcc--EEEEEECCCCceee----eee---ecCCCCceEEEEEcCCCCeEEEEcccccccCCEE
Confidence 357788888754 4444333 77777664332211 000 111245688999999666788887 778999
Q ss_pred EEEeec
Q 018675 344 KIWELA 349 (352)
Q Consensus 344 ~iw~~~ 349 (352)
.+|+..
T Consensus 296 ~v~d~~ 301 (328)
T 3dsm_A 296 YRYSPQ 301 (328)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999875
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.32 E-value=3.9e-08 Score=83.75 Aligned_cols=238 Identities=10% Similarity=0.019 Sum_probs=156.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 154 (352)
..+.+++++++|++.++...++.+.+|+.. +.... .....+...+.++++.+++.++++...++.|..|+.. +. ..
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~ 90 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IK 90 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EE
Confidence 468899999999988876667899999866 44322 2222345678999999999988887778889999864 22 22
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~ 234 (352)
.. .+......+..+.+.|++.++++...++.|..|+. .. ... ... .......+..+++++++.++++...
T Consensus 91 ~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g---~~~---~~~--~~~~~~~~~~i~~~~~g~l~v~~~~ 160 (299)
T 2z2n_A 91 EY-TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DG---KIR---EYE--LPNKGSYPSFITLGSDNALWFTENQ 160 (299)
T ss_dssp EE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC---CEE---EEE--CSSTTCCEEEEEECTTSCEEEEETT
T ss_pred EE-eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CC---CEE---Eec--CCCCCCCCceEEEcCCCCEEEEeCC
Confidence 11 12223456788999999988777777888998865 21 111 111 1123456889999999998888777
Q ss_pred CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeec
Q 018675 235 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313 (352)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
++.|..||.. .+.. .. .. ......+..+.+++++ .+++...++.+..++. .... ... .
T Consensus 161 ~~~i~~~~~~-g~~~---------~~-~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~------~~~--~ 219 (299)
T 2z2n_A 161 NNAIGRITES-GDIT---------EF-KI-PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI------TEF--K 219 (299)
T ss_dssp TTEEEEECTT-CCEE---------EE-EC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE------EEE--E
T ss_pred CCEEEEEcCC-CcEE---------Ee-eC-CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE------EEE--E
Confidence 8899999762 1110 00 00 1123346678888766 4555555778888855 2111 011 1
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
...+...+.+++++|++. ++++...++.|.+|+.
T Consensus 220 ~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 220 IPTPNARPHAITAGAGID-LWFTEWGANKIGRLTS 253 (299)
T ss_dssp CSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEET
T ss_pred CCCCCCCceeEEECCCCC-EEEeccCCceEEEECC
Confidence 223456789999999886 6777667888988886
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.32 E-value=6.7e-08 Score=90.12 Aligned_cols=301 Identities=9% Similarity=0.050 Sum_probs=174.5
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecC--CCceeeeeeeeeecceecceEEEEEC----CCCCEEEEEeC-C
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQS--ASSRFWNCKAVLEEMHTRTVRSCAWS----PSGKLLATASF-D 95 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~--~~~~~~~~~~~~~~~h~~~v~~~~~s----~~~~~l~s~~~-d 95 (352)
.+.++.|+|+ ++++++++.|+.|.+||+. +.+... .+.. ......++|+ |||++++++.. +
T Consensus 198 ~p~~v~~SpD------Gr~lyv~~~dg~V~viD~~~~t~~~v~----~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~ 265 (567)
T 1qks_A 198 AVHISRLSAS------GRYLFVIGRDGKVNMIDLWMKEPTTVA----EIKI--GSEARSIETSKMEGWEDKYAIAGAYWP 265 (567)
T ss_dssp CEEEEEECTT------SCEEEEEETTSEEEEEETTSSSCCEEE----EEEC--CSEEEEEEECCSTTCTTTEEEEEEEET
T ss_pred CccceEECCC------CCEEEEEcCCCeEEEEECCCCCCcEeE----EEec--CCCCceeEEccccCCCCCEEEEEEccC
Confidence 5668999997 5788888999999999985 443221 1211 1235788999 69998877665 5
Q ss_pred CcEEEEEccCCceeeeEeec--c--------ccC-CeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCc
Q 018675 96 ATTCIWEDVGGDYECVATLE--G--------HEN-EVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHA 163 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~--~--------h~~-~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~ 163 (352)
+++.++|..+.+ .+..+. + |.. .+..+..++++. ++++...++.|.++|........ +..+. ..
T Consensus 266 ~~v~ViD~~t~~--~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~-v~~i~-~~ 341 (567)
T 1qks_A 266 PQYVIMDGETLE--PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK-TTEIS-AE 341 (567)
T ss_dssp TEEEEEETTTCC--EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE-EEEEE-CC
T ss_pred CeEEEEECCCCc--EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce-eeeee-cc
Confidence 899999866543 333322 1 222 577888888755 45666677999999976544332 22222 22
Q ss_pred cCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceeEeeeec-cCCCCcccEEEEEEcCC-CCEEEEEe-CCCcEE
Q 018675 164 QDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTDSDNWHCVQTISE-SNNGHSSTIWALSFNAK-GDKLVSCS-DDLTIK 239 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~-~~~~h~~~i~~l~~~~~-~~~l~s~~-~dg~i~ 239 (352)
.....+.|+|++++++++. .++.|.++|.... +....+.. ....|...-..+ ++|+ +..++++. .++.|.
T Consensus 342 ~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-----kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vs 415 (567)
T 1qks_A 342 RFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-----KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVA 415 (567)
T ss_dssp SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT-----EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEE
T ss_pred ccccCceECCCCCEEEEEeCCCCeEEEEECCCC-----cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEE
Confidence 3456788999999877665 5788999987542 22333332 223343222122 5787 44455553 468999
Q ss_pred EEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eE-EecC-C-----CCeEEEEEccCCccccCcccceee
Q 018675 240 IWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-II-ASGA-A-----DDSVQFFVESKDDLIDGPSYKMLL 311 (352)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-~s~~-~-----d~~v~~~~~~~~~~~~~~~~~~~~ 311 (352)
++|.+..+- ....|+....+... ...-..+..+|++ .+ +... . .++|.+++.....+-........+
T Consensus 416 vid~~~~~~----~~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~ 490 (567)
T 1qks_A 416 LIGTDPEGH----PDNAWKILDSFPAL-GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTL 490 (567)
T ss_dssp EEECCTTTC----TTTBTSEEEEEECS-CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEE
T ss_pred EecCCCCCC----ccccCEEEEEEecC-CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEe
Confidence 998753110 01124444443321 1111223445654 33 3221 1 357888876432000000000111
Q ss_pred e--c---ccccCcceeEEEecCCCcceEEEec----CCCeEEEEeecc
Q 018675 312 K--K---EKAHDMDVNSVQWSPGERRLLASAS----DDGMIKIWELAN 350 (352)
Q Consensus 312 ~--~---~~~h~~~i~~~~~sp~~~~~l~s~~----~Dg~i~iw~~~~ 350 (352)
. + ...-...+..+.|+|+|+.+++|.. .++.|.|+|..+
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t 538 (567)
T 1qks_A 491 PIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 538 (567)
T ss_dssp CHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred ccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCC
Confidence 1 0 1112357899999999998888843 378999998754
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.29 E-value=1.3e-08 Score=86.24 Aligned_cols=221 Identities=12% Similarity=0.045 Sum_probs=134.2
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceeeeEeecccc-CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecC-
Q 018675 85 SGKLLATASFDATTCIWEDVGGDYECVATLEGHE-NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGH- 162 (352)
Q Consensus 85 ~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h- 162 (352)
.+++|++++.|+.|.+||..+++. +..+..+. ..+.++.+.|+|++++ +.++.|..||. .++ .+..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~---~~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI--VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR---ELWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE--EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC---EEEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE--EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC---EEEEEcCCC
Confidence 467899999999999999877753 44444444 4688999999999888 45678999997 454 33444443
Q ss_pred ccCeeEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 163 AQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 163 ~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
...+.++.+.|++..+++.+. ++.+..++.... ..+. ..+.....++......+.+.++|+++++...++.|..|
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk--~l~~--~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNMKGE--VLSK--TEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 151 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECTTSC--EEEE--EEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEE
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeCCCC--EEEE--EeccCCCCcccccccCceECCCCCEEEEecCCCEEEEE
Confidence 245778889999999998887 666666643211 0011 11111111222344456788999999999999999999
Q ss_pred cCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeee-cccc-cC
Q 018675 242 GADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLK-KEKA-HD 318 (352)
Q Consensus 242 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~-~~~~-h~ 318 (352)
|.+ .+. .|+ +.. ...+++....+++ +++++..++.+..++.....+. ..+-. ...+ .-
T Consensus 152 d~~-G~~-------~w~----~~~--~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~-----w~~~~~~~~~~~l 212 (276)
T 3no2_A 152 APN-GQL-------LNS----VKL--SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV-----RRVNANDIEGVQL 212 (276)
T ss_dssp CTT-SCE-------EEE----EEC--SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE-----EEEEGGGSBSCCC
T ss_pred CCC-CCE-------EEE----EEC--CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE-----EEecCCCCCCccc
Confidence 865 221 122 111 1223444555554 6777777777877765422211 11100 0011 12
Q ss_pred cceeEEEecCCCcceEEEe
Q 018675 319 MDVNSVQWSPGERRLLASA 337 (352)
Q Consensus 319 ~~i~~~~~sp~~~~~l~s~ 337 (352)
..+..++..+++. ++++.
T Consensus 213 ~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 213 FFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp SEEEEEEECTTSC-EEEEE
T ss_pred cccccceEcCCCC-EEEEe
Confidence 3467777777775 45544
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.26 E-value=3.5e-09 Score=102.62 Aligned_cols=246 Identities=12% Similarity=0.029 Sum_probs=144.3
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeCC-----CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSGD-----KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D-----~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
+|...+.+++|+|+ ++.+|.++.+ .+|++|++.+++.... . .+...+..++|+|| +.|+.++
T Consensus 160 ~~~~~~~~~~~SPD------G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~---~---~~~~~~~~~~wspD-~~l~~~~ 226 (741)
T 1yr2_A 160 DGATALDAWAASDD------GRLLAYSVQDGGSDWRTVKFVGVADGKPLAD---E---LKWVKFSGLAWLGN-DALLYSR 226 (741)
T ss_dssp ---EEEEEEEECTT------SSEEEEEEEETTCSEEEEEEEETTTCCEEEE---E---EEEEESCCCEESTT-SEEEEEE
T ss_pred CCCEEEEeEEECCC------CCEEEEEEcCCCCceEEEEEEECCCCCCCCc---c---CCCceeccEEEECC-CEEEEEE
Confidence 45557889999997 5677776544 4699999988753211 1 12222357899999 9999888
Q ss_pred CCCc--------------EEEEEccCCce--eeeEeeccccCCeeEEEECCCCcEEEEeeCCC-----cEEEEecCCCCe
Q 018675 94 FDAT--------------TCIWEDVGGDY--ECVATLEGHENEVKSVSWNASGTLLATCGRDK-----SVWIWEVMPGNE 152 (352)
Q Consensus 94 ~d~~--------------i~i~~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----~v~vwd~~~~~~ 152 (352)
.|+. |.+|+..++.. ..+.....+...+..+.|+|+|++|+..+.++ .|.+||+..+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~ 306 (741)
T 1yr2_A 227 FAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI 306 (741)
T ss_dssp CCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE
T ss_pred ecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC
Confidence 7654 77787655432 12222233334588999999999888776543 899999865411
Q ss_pred eEEEEEeecCccCeeEEEEcCCCCEEEEEeCC----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
.+...+..+....... ++|++..|+..+.+ +.|.+|++.... ..+. .+. ..+...+..+.++ ++.+
T Consensus 307 -~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~---~l~---~~~~~~l~~~~~~-~~~l 376 (741)
T 1yr2_A 307 -GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFD---TVV---PESKDNLESVGIA-GNRL 376 (741)
T ss_dssp -CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEE---EEE---CCCSSEEEEEEEE-BTEE
T ss_pred -cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccE---EEe---cCCCCeEEEEEEE-CCEE
Confidence 1012233344444433 34888888777654 348888765422 1222 221 1233456677877 5567
Q ss_pred EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEE----ecCCCCeEEEEEcc
Q 018675 229 LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIA----SGAADDSVQFFVES 297 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~----s~~~d~~v~~~~~~ 297 (352)
+++...|+..++|..+... .....+.......+..+.+++++ .++ +....++++.|+..
T Consensus 377 v~~~~~dg~~~l~~~~~~g----------~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 377 FASYIHDAKSQVLAFDLDG----------KPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EEEEEETTEEEEEEEETTS----------CEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EEEEEECCEEEEEEEeCCC----------CceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 7888899988888553210 01111111123446667777654 233 33445677787654
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.25 E-value=2.2e-09 Score=91.07 Aligned_cols=184 Identities=13% Similarity=0.184 Sum_probs=129.2
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeeccee-cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT-RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGH 117 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h 117 (352)
++.+++++.|+.|.+||.++++..|+... +. ..+.+++++|+|++++ +.++.+..||. +++ .+..+..+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~--~~W~~~~~ 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR--ELWNIAAP 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC--EEEEEECC
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC--EEEEEcCC
Confidence 47899999999999999988887776542 22 3578899999999988 45788999987 554 23344433
Q ss_pred -cCCeeEEEECCCCcEEEEeeC-CCcEEEEecCCCCeeEEEEEe---ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEec
Q 018675 118 -ENEVKSVSWNASGTLLATCGR-DKSVWIWEVMPGNEFECVSVL---QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWA 192 (352)
Q Consensus 118 -~~~v~~v~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~ 192 (352)
...+.++.+.++|+.+++.+. ++.+..+|. .++.......- ..+......++..+++.++++...++.|..|+.
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 346888999999999999887 777777764 34332221110 112223455678899999999999999999975
Q ss_pred CCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 193 EDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.. . .+.++.. ...+.++...++++++++++.+++|..+|.+
T Consensus 154 ~G-~-----~~w~~~~-----~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 154 NG-Q-----LLNSVKL-----SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp TS-C-----EEEEEEC-----SSCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CC-C-----EEEEEEC-----CCCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 42 1 1222221 1234567778999999999988899999865
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.23 E-value=1.4e-09 Score=104.64 Aligned_cols=247 Identities=11% Similarity=0.007 Sum_probs=151.8
Q ss_pred ceecceEEEEECCCCCEEEE-----EeCCCcEEEEEccCCceeeeEeeccccCCe--eEEEECCCCcEEEEeeCCCc---
Q 018675 72 MHTRTVRSCAWSPSGKLLAT-----ASFDATTCIWEDVGGDYECVATLEGHENEV--KSVSWNASGTLLATCGRDKS--- 141 (352)
Q Consensus 72 ~h~~~v~~~~~s~~~~~l~s-----~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~~~d~~--- 141 (352)
.|...+..++|||||++||. |+.+..|++||..+++... ..+...+ ..++|+|+|+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~----~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK----VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS----SCCBSCCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC----CcccCcccccceEEecCCCEEEEEEecCCCCC
Confidence 35557899999999999983 4445689999988775320 1122222 67999999999999988876
Q ss_pred ----------EEEEecCCCCee-EEEEEeecCccCeeEEEEcCCCCEEEEEeCCC----cEEEEecCCCCCCCceeEeee
Q 018675 142 ----------VWIWEVMPGNEF-ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN----TIKVWWAEDTDSDNWHCVQTI 206 (352)
Q Consensus 142 ----------v~vwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~ 206 (352)
|++|++..+... ..+.....|...+..+.|+|++++++..+.++ .|.+++.. ...+.. +
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~---~~~~~~---l 267 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG---EKDFRL---L 267 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT---CSSCEE---E
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC---CCceEE---e
Confidence 999998654321 23333334555678999999999888776655 45555321 112222 2
Q ss_pred eccCCCCcccEEEEEEcCCCCEEEEEe---CCCcEEEEcCCccccccCCCCccceeeEEeeccc-CcceEEEEecCCceE
Q 018675 207 SESNNGHSSTIWALSFNAKGDKLVSCS---DDLTIKIWGADITRMQSGDGYASWRHLCTISGYH-DRTIFSVHWSREGII 282 (352)
Q Consensus 207 ~~~~~~h~~~i~~l~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~ 282 (352)
.. +...+....+ ++|.++++.. .++.|.+||++.... ..|.. +...+ ...+..+.++.+.++
T Consensus 268 ~~----~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~------~~~~~---l~~~~~~~~l~~~~~~~~~lv 333 (695)
T 2bkl_A 268 VK----GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPAR------ASWKE---IVPEDSSASLLSVSIVGGHLS 333 (695)
T ss_dssp EE----CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSG------GGCEE---EECCCSSCEEEEEEEETTEEE
T ss_pred ec----CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCc------cCCeE---EecCCCCCeEEEEEEECCEEE
Confidence 11 2223344445 5665544444 257899998753211 11221 12222 344666777766678
Q ss_pred EecCCCCeEEEEEccCCccccCcccceeeeccccc-CcceeEEEecCCCcceEEEec---CCCeEEEEeecc
Q 018675 283 ASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASAS---DDGMIKIWELAN 350 (352)
Q Consensus 283 ~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~sp~~~~~l~s~~---~Dg~i~iw~~~~ 350 (352)
++...|+..++|..... +. .......+ .+.|..++++|++..++++.+ ..++|.+||+..
T Consensus 334 ~~~~~dg~~~l~~~~~~----g~----~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 334 LEYLKDATSEVRVATLK----GK----PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEETTEEEEEEEETT----CC----EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEECCEEEEEEEeCC----CC----eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 88888998888865321 11 11112223 567888999998876554443 347799999754
No 201
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=3.5e-08 Score=88.55 Aligned_cols=257 Identities=9% Similarity=-0.019 Sum_probs=151.0
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC--cEEEEecCCCCee
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEF 153 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~ 153 (352)
....++|+++++++++...++.|+.|+..++....+. .. ..... ++|+++++.|+.+..++ .|.+++.......
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~--~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH--PG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE--ET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee--cc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 5678999999998888888899999998766433222 22 22334 89999999888888766 7888886543321
Q ss_pred EEEEEeec-CccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCccc--EEEEEEcCC-CCEE
Q 018675 154 ECVSVLQG-HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSST--IWALSFNAK-GDKL 229 (352)
Q Consensus 154 ~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~--i~~l~~~~~-~~~l 229 (352)
..+..+.. ......+++++|++..|+.+..++.|..|+..... ........ ..++... ...++|+|+ +.++
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~---~~~~~~~~--~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE---VTLIKQLE--LSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC---EEEEEECC--CCSCCCCSSCCEEEEETTTTEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC---EEEEeccc--ccCCCCCCccccEEEeCCCCEEE
Confidence 22211112 33556788999955555667778889999765332 11111110 1111111 128999995 6667
Q ss_pred EEEeCCCcEEEEcCCcccc--ccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecC-CCCeEEEEEccCCccccCc
Q 018675 230 VSCSDDLTIKIWGADITRM--QSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGA-ADDSVQFFVESKDDLIDGP 305 (352)
Q Consensus 230 ~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~-~d~~v~~~~~~~~~~~~~~ 305 (352)
++-..+++|+.|+.+.... ........+.. .......-.....+++++++ ++++-. .++.|+.|+.....+.
T Consensus 283 v~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~d-g~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~--- 358 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECEWFCGSATQKTVQD-GLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS--- 358 (409)
T ss_dssp EEETTTTEEEEECTTCCEEEEEECTTCCSCBC-EEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE---
T ss_pred EEeCCCCEEEEEecCCCEEEEEeCCCCCCcCC-CcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE---
Confidence 7777788999998652100 00000000000 00000011346778888876 556666 6788888863221110
Q ss_pred ccceeeec-----------ccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 306 SYKMLLKK-----------EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 306 ~~~~~~~~-----------~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.+... ....-.....++++|++ .++++-..++.|+.++++
T Consensus 359 ---~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 359 ---TVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp ---EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEESTTCEEEEEEEC
T ss_pred ---EEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEEEEECCCCeEEEEEeC
Confidence 00000 00112457899999986 588888889999988764
No 202
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.21 E-value=1.3e-08 Score=98.23 Aligned_cols=242 Identities=8% Similarity=0.039 Sum_probs=132.2
Q ss_pred CCCCEEEEEeCCC-c--EEEEEcc--CCceeeeEee----ccccCCeeEEEECCCCcEEEEeeCCC-----cEEEEecCC
Q 018675 84 PSGKLLATASFDA-T--TCIWEDV--GGDYECVATL----EGHENEVKSVSWNASGTLLATCGRDK-----SVWIWEVMP 149 (352)
Q Consensus 84 ~~~~~l~s~~~d~-~--i~i~~~~--~~~~~~~~~~----~~h~~~v~~v~~~~~~~~l~s~~~d~-----~v~vwd~~~ 149 (352)
|+|++++....++ . -.+|... +++.+.+... .+|...+..++|+|+|++|+.++.++ .|++||+..
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7888877554332 1 2345432 3332222111 12334688999999999988665433 899999976
Q ss_pred CCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCc----------------EEEEecCCCCCCCceeEeeeeccCCCC
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT----------------IKVWWAEDTDSDNWHCVQTISESNNGH 213 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~----------------i~iw~~~~~~~~~~~~~~~~~~~~~~h 213 (352)
+..... .+ .+ ..+..++|+|+++.|+.++.++. |.+|++....... ..+. ....|
T Consensus 161 g~~~~~--~~-~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~~v~----~~~~~ 231 (710)
T 2xdw_A 161 AKELPD--VL-ER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-ILCA----EFPDE 231 (710)
T ss_dssp TEEEEE--EE-EE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-EEEE----CCTTC
T ss_pred CCCCcc--cc-cC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-eEEe----ccCCC
Confidence 543221 11 11 13567899999999998887765 8888875432110 1111 11234
Q ss_pred cccEEEEEEcCCCCEEEEEeC-----CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecC-CceE-EecC
Q 018675 214 SSTIWALSFNAKGDKLVSCSD-----DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGII-ASGA 286 (352)
Q Consensus 214 ~~~i~~l~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~-~s~~ 286 (352)
...+.++.|+|+|++|+..+. +..|.+||+..... ...+...+ ..+..... .... .+++ ++.+ +...
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~~~~---~~l~~~~~-~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN-GITGILKW---VKLIDNFE-GEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS-SSCSSCCC---EEEECSSS-SCEE-EEEEETTEEEEEEC
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc-ccCCccce---EEeeCCCC-cEEE-EEeccCCEEEEEEC
Confidence 556788999999999887664 56888898753000 00000001 11221111 2222 2333 3333 3332
Q ss_pred C---CCeEEEEEccCCccccCcccceeeecccccC--cceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 287 A---DDSVQFFVESKDDLIDGPSYKMLLKKEKAHD--MDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 287 ~---d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
. +..+..++...... ..... ...|. ..+..++|++++ .++++...|+..+||-+
T Consensus 306 ~~~~~~~l~~~d~~~~~~---~~~~~----l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~ 364 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEE---SKWKV----LVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLH 364 (710)
T ss_dssp TTCTTCEEEEEETTSCCG---GGCEE----EECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEE
T ss_pred CCCCCCEEEEEeCCCCCc---cccee----ccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEE
Confidence 2 23577775433210 01112 22332 368889998765 57889999997655543
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.20 E-value=5.5e-08 Score=84.52 Aligned_cols=199 Identities=11% Similarity=0.009 Sum_probs=122.2
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
...+..|+|+. +.++++...++.|..|+..++.. . .+ .....+.+++|+|+|+++++. . ..+.+||
T Consensus 50 ~~egp~~~~~~-----~~l~~~d~~~~~i~~~d~~~~~~----~-~~--~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d 115 (326)
T 2ghs_A 50 LGEGPTFDPAS-----GTAWWFNILERELHELHLASGRK----T-VH--ALPFMGSALAKISDSKQLIAS-D-DGLFLRD 115 (326)
T ss_dssp BEEEEEEETTT-----TEEEEEEGGGTEEEEEETTTTEE----E-EE--ECSSCEEEEEEEETTEEEEEE-T-TEEEEEE
T ss_pred CCcCCeEeCCC-----CEEEEEECCCCEEEEEECCCCcE----E-EE--ECCCcceEEEEeCCCeEEEEE-C-CCEEEEE
Confidence 34578899864 35677777789999999876531 1 11 123578999999999887754 3 4588888
Q ss_pred ccCCceeeeEeecc-c-cCCeeEEEECCCCcEEEEeeCC----CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 103 DVGGDYECVATLEG-H-ENEVKSVSWNASGTLLATCGRD----KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 103 ~~~~~~~~~~~~~~-h-~~~v~~v~~~~~~~~l~s~~~d----~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
..+++...+..... . ...++.+.++|+|.++++...+ ....+|.+. ...... +..+......++|+|+++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~---~~~~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTK---LFADISIPNSICFSPDGT 191 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEE---EEEEESSEEEEEECTTSC
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEE---eeCCCcccCCeEEcCCCC
Confidence 76665443322211 1 2358899999999977665422 223444443 232222 222223456889999998
Q ss_pred EEEEE-eCCCcEEEEecC--CC-CCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 177 VLFSC-SYDNTIKVWWAE--DT-DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 177 ~l~s~-~~d~~i~iw~~~--~~-~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
.++.+ +.++.|.+|+.. .. ..........+ ......+..++++++|.++++...++.|.+|+.
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~----~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS----TGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC----TTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEEC----CCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 76544 457889999864 11 11111111111 112344678899999988887766778888864
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.19 E-value=3.4e-07 Score=77.86 Aligned_cols=238 Identities=8% Similarity=-0.019 Sum_probs=153.9
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 154 (352)
..+.+++++++|++.++...++.+.+|+.. ++... ..+......+.++.+.+++.++++...++.|..+|.. +.. .
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~ 95 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-T 95 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-E
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-E
Confidence 467889999999988877778999999866 44332 2233334678899999999988877777889999875 332 2
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~ 234 (352)
. .........+..+.+.+++.++++...++.|..++... ... ... .......+..+.++++++++++...
T Consensus 96 ~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g----~~~---~~~--~~~~~~~~~~i~~d~~g~l~v~~~~ 165 (300)
T 2qc5_A 96 E-YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADG----TIY---EYD--LPNKGSYPAFITLGSDNALWFTENQ 165 (300)
T ss_dssp E-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS----CEE---EEE--CSSTTCCEEEEEECTTSSEEEEETT
T ss_pred E-ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCC----CEE---Ecc--CCCCCCCceeEEECCCCCEEEEecC
Confidence 1 12222335678899999988777766678888886431 111 111 1123356889999999998877777
Q ss_pred CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeec
Q 018675 235 DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313 (352)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
++.|..++... .. .. .. .......+..+.+++++ .+++....+.+..++.... . .. ..
T Consensus 166 ~~~i~~~~~~g-~~---------~~-~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~-~------~~--~~ 224 (300)
T 2qc5_A 166 NNSIGRITNTG-KL---------EE-YP-LPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGE-I------SE--YD 224 (300)
T ss_dssp TTEEEEECTTC-CE---------EE-EE-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC-E------EE--EE
T ss_pred CCeEEEECCCC-cE---------EE-ee-CCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCc-E------EE--EE
Confidence 78899997521 11 00 00 01123356777888766 4444455667877754211 0 00 11
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeEEEEee
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
...+...+.++++.+++. ++++...++.|..|+.
T Consensus 225 ~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 225 IPTPNARPHAITAGKNSE-IWFTEWGANQIGRITN 258 (300)
T ss_dssp CSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT
T ss_pred CCCCCCCceEEEECCCCC-EEEeccCCCeEEEECC
Confidence 123445688999999886 6777766788888876
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.17 E-value=7.4e-10 Score=97.76 Aligned_cols=180 Identities=13% Similarity=0.059 Sum_probs=119.8
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecCCCC--------eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGN--------EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~ 191 (352)
.++.+++++...++++|+.++ +.+|++.... ..+... ...+.. |..++| ++..|+++ .++.|++|+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 588999999999999999986 6679863211 011111 123455 999999 88888888 889999998
Q ss_pred cCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcce
Q 018675 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTI 271 (352)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 271 (352)
+...... .... .|...+.++.+.+. .+++++.||.|.+||++.... . . ....+
T Consensus 113 v~sl~~~-----~~~~----~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~-----------~-~----~~~~V 165 (388)
T 1xip_A 113 LEELSEF-----RTVT----SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST-----------K-Q----LAQNV 165 (388)
T ss_dssp SSSTTCE-----EEEE----ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE-----------E-E----EEESE
T ss_pred chhhhcc-----Cccc----eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc-----------c-c----ccCCc
Confidence 7654321 1111 24456777776654 388899999999999853211 0 0 23468
Q ss_pred EEEEecCCceEEecCCCCeEEEEEccCCcc--c-cCcccceeeecccccCcceeEEEecCCCcceE
Q 018675 272 FSVHWSREGIIASGAADDSVQFFVESKDDL--I-DGPSYKMLLKKEKAHDMDVNSVQWSPGERRLL 334 (352)
Q Consensus 272 ~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~--~-~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l 334 (352)
.+++|+++| ++.|..||++++|....... . ..+.+.. +....+|...|.++.|.+++..++
T Consensus 166 s~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~-~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 166 TSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE-LEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp EEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHH-HHTSCTTTSEEEEEEESSSSEEEE
T ss_pred eEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcc-cccccCCCeeEEEEEEecCCeEEE
Confidence 999999999 77888999999996654321 0 0000000 011125788999999999876443
No 206
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.14 E-value=9.3e-08 Score=83.15 Aligned_cols=235 Identities=9% Similarity=0.016 Sum_probs=144.9
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWE 102 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 102 (352)
...++.+.. ..++++...+++|.+||..+.+...... .......+++++++++.++...++.|.+||
T Consensus 45 ~~~~i~~~~-------~~lyv~~~~~~~v~viD~~t~~~~~~i~------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD 111 (328)
T 3dsm_A 45 VAQSMVIRD-------GIGWIVVNNSHVIFAIDINTFKEVGRIT------GFTSPRYIHFLSDEKAYVTQIWDYRIFIIN 111 (328)
T ss_dssp CEEEEEEET-------TEEEEEEGGGTEEEEEETTTCCEEEEEE------CCSSEEEEEEEETTEEEEEEBSCSEEEEEE
T ss_pred cceEEEEEC-------CEEEEEEcCCCEEEEEECcccEEEEEcC------CCCCCcEEEEeCCCeEEEEECCCCeEEEEE
Confidence 456676643 3567777778999999998775433221 234578899999986666655899999999
Q ss_pred ccCCceeeeEeecccc-----CCeeEEEECCCCcEEEEee-CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 103 DVGGDYECVATLEGHE-----NEVKSVSWNASGTLLATCG-RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 103 ~~~~~~~~~~~~~~h~-----~~v~~v~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
..+++.. ..+.... .....+++ .++.++++.. .+++|.++|...... +..+.. ......+.++|+++
T Consensus 112 ~~t~~~~--~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~---~~~i~~-g~~p~~i~~~~dG~ 184 (328)
T 3dsm_A 112 PKTYEIT--GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKV---VDELTI-GIQPTSLVMDKYNK 184 (328)
T ss_dssp TTTTEEE--EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEE---EEEEEC-SSCBCCCEECTTSE
T ss_pred CCCCeEE--EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeE---EEEEEc-CCCccceEEcCCCC
Confidence 8776432 2222111 14556777 4444444443 488999999875543 222222 12345778899998
Q ss_pred EEEEEeCC----------CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCcc
Q 018675 177 VLFSCSYD----------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 177 ~l~s~~~d----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~ 246 (352)
+++++..+ +.|.++|.... .....+.. ........++++|++++|..+.. .|.+||....
T Consensus 185 l~v~~~~~~~~~~~~~~~~~v~~id~~t~-----~v~~~~~~---~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~ 254 (328)
T 3dsm_A 185 MWTITDGGYEGSPYGYEAPSLYRIDAETF-----TVEKQFKF---KLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEAD 254 (328)
T ss_dssp EEEEBCCBCTTCSSCBCCCEEEEEETTTT-----EEEEEEEC---CTTCCCEEEEECTTSCEEEEESS--SEEEEETTCS
T ss_pred EEEEECCCccCCccccCCceEEEEECCCC-----eEEEEEec---CCCCCceeEEEecCCCEEEEEcc--EEEEEECCCC
Confidence 77666554 68999975432 22222221 11235788999999988877654 8888987543
Q ss_pred ccccCCCCccceeeEEeecccCcceEEEEecC-Cc-eEEec----CCCCeEEEEEcc
Q 018675 247 RMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EG-IIASG----AADDSVQFFVES 297 (352)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~s~----~~d~~v~~~~~~ 297 (352)
+..... +.......+..++++| ++ .+++. ..++.|.+|+..
T Consensus 255 ~~~~~~----------~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 255 RVPVRP----------FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SCCSSC----------SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ceeeee----------eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 221100 0000134577888887 44 45555 567888888654
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.13 E-value=4.9e-07 Score=81.05 Aligned_cols=203 Identities=10% Similarity=0.100 Sum_probs=125.9
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCC--cE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDA--TT 98 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~--~i 98 (352)
.....+|+|.|+ +.++++...++.|++|+..++... ..... . .... ++|+|+++.|+++..++ .+
T Consensus 130 ~~~P~~la~d~~------g~lyv~d~~~~~I~~id~~~g~~~----~~~~~-~-~~~~-ia~~~~g~~l~~~d~~~~~~I 196 (409)
T 3hrp_A 130 FKYMWGIAAVGN------NTVLAYQRDDPRVRLISVDDNKVT----TVHPG-F-KGGK-PAVTKDKQRVYSIGWEGTHTV 196 (409)
T ss_dssp CCCEEEEEECST------TEEEEEETTTTEEEEEETTTTEEE----EEEET-C-CBCB-CEECTTSSEEEEEBSSTTCEE
T ss_pred cCCceEEEEeCC------CCEEEEecCCCcEEEEECCCCEEE----Eeecc-C-CCCc-eeEecCCCcEEEEecCCCceE
Confidence 346778999886 467777777899999998765321 11111 1 1223 89999999988888766 67
Q ss_pred EEEEccCCce-eeeEeecc-ccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEE--eecCccCe--eEEEEc
Q 018675 99 CIWEDVGGDY-ECVATLEG-HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSV--LQGHAQDV--KMVQWH 172 (352)
Q Consensus 99 ~i~~~~~~~~-~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~--~~~h~~~v--~~~~~~ 172 (352)
.+++..++.. .....+.. ....+.+++++|++..|+.+..++.|..||..... ...+.. ..++...- ..++|+
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~-~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE-VTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC-EEEEEECCCCSCCCCSSCCEEEEE
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC-EEEEecccccCCCCCCccccEEEe
Confidence 7777654332 11111112 44667899999944444446678889999976443 111111 11222112 289999
Q ss_pred CC-CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc--CC---------CCcccEEEEEEcCCCCEEEEEe-CCCcEE
Q 018675 173 PT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES--NN---------GHSSTIWALSFNAKGDKLVSCS-DDLTIK 239 (352)
Q Consensus 173 ~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~--~~---------~h~~~i~~l~~~~~~~~l~s~~-~dg~i~ 239 (352)
|+ +.++++-...+.|..|+.... . ..+... .. +.-.....++++|+|.++++-. .+++|+
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g~----~---~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDGE----C---EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCC----E---EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred CCCCEEEEEeCCCCEEEEEecCCC----E---EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 95 555566666788888864321 1 111100 00 1123578899999999888888 889999
Q ss_pred EEcCC
Q 018675 240 IWGAD 244 (352)
Q Consensus 240 iwd~~ 244 (352)
.|+..
T Consensus 349 ~~~~~ 353 (409)
T 3hrp_A 349 KLDIL 353 (409)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99853
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.12 E-value=2.7e-08 Score=95.57 Aligned_cols=202 Identities=9% Similarity=0.115 Sum_probs=120.2
Q ss_pred cCCccceEEEEEccCCCCCCCccEEE-----EeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE
Q 018675 18 EGHTDRVWSLAWKPTAGVDGVAPVFA-----SCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA 92 (352)
Q Consensus 18 ~gH~~~V~~i~~~p~~~~~~~~~~l~-----s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 92 (352)
++|...+.+++|+|+ ++++| +|+.+.+|++||+.+++.... .+ +......++|+ ||+.|+.+
T Consensus 125 ~~~~~~l~~~~~SpD------g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~---~~~k~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 125 PDGTTALDQLSFSRD------GRILAYSLSLAGSDWREIHLMDVESKQPLET---PL---KDVKFSGISWL-GNEGFFYS 191 (693)
T ss_dssp TTSCCEEEEEEECTT------SSEEEEEEECSSCCEEEEEEEETTTCSEEEE---EE---EEEESCCCEEE-TTTEEEEE
T ss_pred CCCcEEEEEEEECCC------CCEEEEEEecCCCceEEEEEEECCCCCCCcc---cc---CCceeccEEEe-CCCEEEEE
Confidence 357778889999997 45666 233336899999988753211 11 11113567899 99999988
Q ss_pred eCCCc-------------EEEEEccCCce--eeeEeecc-ccCCeeEEEECCCCcEEEEee----CCCcEEEEecCCCCe
Q 018675 93 SFDAT-------------TCIWEDVGGDY--ECVATLEG-HENEVKSVSWNASGTLLATCG----RDKSVWIWEVMPGNE 152 (352)
Q Consensus 93 ~~d~~-------------i~i~~~~~~~~--~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~----~d~~v~vwd~~~~~~ 152 (352)
+.+.. |.+|+..+... .++..... |...+..+.|+|+|++|+... .+..|.++|+..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 88743 78887655432 22333333 445577899999999765433 225789999865421
Q ss_pred eEEEEEeecCccCeeEEEEcCCCCEEE-EEeCC---CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCE
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYD---NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDK 228 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 228 (352)
....+..+....... +++++..|+ ....+ +.|..+++.......|.. +. .|...+. .|+++++.
T Consensus 272 --~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~---l~----~~~~~~~--~~s~~g~~ 339 (693)
T 3iuj_A 272 --PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRD---LI----PERQQVL--TVHSGSGY 339 (693)
T ss_dssp --CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE---EE----CCCSSCE--EEEEETTE
T ss_pred --ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEE---Ee----cCCCCEE--EEEEECCE
Confidence 122333444444333 566666554 44433 467777766543333332 21 2333333 78888888
Q ss_pred EEEEeC-CC--cEEEEcCC
Q 018675 229 LVSCSD-DL--TIKIWGAD 244 (352)
Q Consensus 229 l~s~~~-dg--~i~iwd~~ 244 (352)
|+.... ++ .|++|+++
T Consensus 340 lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 340 LFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp EEEEEEETTEEEEEEECTT
T ss_pred EEEEEEECCeeEEEEEECC
Confidence 876654 44 67777754
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.10 E-value=5.1e-08 Score=83.82 Aligned_cols=230 Identities=11% Similarity=0.093 Sum_probs=132.6
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeE
Q 018675 76 TVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE 154 (352)
Q Consensus 76 ~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 154 (352)
......|+|+|+ +++++..++.+..|+. ++.. ..+..+...+..+.++++|+++++...++.|..|+.. +. ..
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~---~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~~ 119 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV---DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-AH 119 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE---EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE---EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-EE
Confidence 456778999998 6677777889999976 4432 2333345678999999999977766666789999864 33 22
Q ss_pred EEE-EeecC-ccCeeEEEEcCCCCEEEE----EeC-------------CCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 155 CVS-VLQGH-AQDVKMVQWHPTMDVLFS----CSY-------------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 155 ~~~-~~~~h-~~~v~~~~~~~~~~~l~s----~~~-------------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
.+. ...+. ...+..+.+.|++.+.++ |.. .+.|..++.... ...... ...
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g---~~~~~~--------~~~ 188 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS---PLQRMA--------DLD 188 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC---CCEEEE--------EES
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC---cEEEEe--------cCC
Confidence 221 11111 123567899999988776 321 134555543221 111111 113
Q ss_pred cEEEEEEcCCCCEEEEEeCC------CcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCC
Q 018675 216 TIWALSFNAKGDKLVSCSDD------LTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADD 289 (352)
Q Consensus 216 ~i~~l~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~ 289 (352)
..+.++|+|+++.|..+... +.|.+|+++.... .....+.......+..+..++++.+..+..+
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l---------~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~- 258 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL---------HDRRHFASVPDGLPDGFCVDRGGWLWSSSGT- 258 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE---------EEEEEEECCSSSCCCSEEECTTSCEEECCSS-
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc---------cCCeEEEECCCCCCCeEEECCCCCEEEecCC-
Confidence 46789999999977766554 6888887642110 0111111111222344666777765555544
Q ss_pred eEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEE
Q 018675 290 SVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIK 344 (352)
Q Consensus 290 ~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~ 344 (352)
.|.+|+.... .+....... .+..++|+|+++.+++++. ++..+
T Consensus 259 gv~~~~~~g~----------~~~~~~~~~-~~~~~~f~~d~~~L~it~~-~~l~~ 301 (305)
T 3dr2_A 259 GVCVFDSDGQ----------LLGHIPTPG-TASNCTFDQAQQRLFITGG-PCLWM 301 (305)
T ss_dssp EEEEECTTSC----------EEEEEECSS-CCCEEEECTTSCEEEEEET-TEEEE
T ss_pred cEEEECCCCC----------EEEEEECCC-ceeEEEEeCCCCEEEEEcC-CeEEE
Confidence 4777754321 111111222 4889999998876665554 54333
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.06 E-value=2e-06 Score=76.05 Aligned_cols=265 Identities=11% Similarity=-0.017 Sum_probs=138.0
Q ss_pred eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe----------CCCcEEEEEccCCceeeeEeeccc--
Q 018675 50 TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLEGH-- 117 (352)
Q Consensus 50 ~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~i~~~~~~~~~~~~~~~~h-- 117 (352)
+|.++|..+.+.. ..+. .+....++++|||+.+..+. .++.+.++|..+.+. +..+.--
T Consensus 48 ~v~v~D~~t~~~~----~~i~---~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSGSIL----GHVN---GGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IADIELPDA 118 (373)
T ss_pred EEEEEECCCCeEE----EEec---CCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--EEEEECCCc
Confidence 8899998776432 1121 11122889999999988775 367899998765432 2322110
Q ss_pred -----cCCeeEEEECCCCcEEEEeeC--CCcEEEEecCCCCeeEEEEE-eecCccCeeEEEEcCCC-CEEEEEeCCCcEE
Q 018675 118 -----ENEVKSVSWNASGTLLATCGR--DKSVWIWEVMPGNEFECVSV-LQGHAQDVKMVQWHPTM-DVLFSCSYDNTIK 188 (352)
Q Consensus 118 -----~~~v~~v~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~ 188 (352)
......+.|+|+|++|+.+.. +++|.++| ..++.. .. +.. . .++.+.|++ ..+++.+.|+.+.
T Consensus 119 ~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~---~~~i~~-~---~~~~~~~~~~~~~~~~~~dg~~~ 190 (373)
T 2mad_H 119 PRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD---DQLLSS-P---TCYHIHPGAPSTFYLLCAQGGLA 190 (373)
T ss_pred cccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE---eEEcCC-C---ceEEEEeCCCceEEEEcCCCCEE
Confidence 123457899999999888874 57899999 765432 22 211 1 123444554 3456677899998
Q ss_pred EEecCCCCCCCceeEeeee--ccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeE---Ee
Q 018675 189 VWWAEDTDSDNWHCVQTIS--ESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLC---TI 263 (352)
Q Consensus 189 iw~~~~~~~~~~~~~~~~~--~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~ 263 (352)
+++. .... ..... ....+...-.....+.+++..++..+.++.+.+.|+........ ..+.... ..
T Consensus 191 ~vd~-~g~~-----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~---~~~~~~~~~~~~ 261 (373)
T 2mad_H 191 KTDH-AGGA-----AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNK---APIDALSGGRKA 261 (373)
T ss_pred EEEC-CCcE-----EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEe---eeeeecCCcccc
Confidence 8876 3211 10110 00011111112244566655444444678888888642111000 0000000 00
Q ss_pred ecccCcceEEEEecCCc-e-EEecC---------CCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcc
Q 018675 264 SGYHDRTIFSVHWSREG-I-IASGA---------ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERR 332 (352)
Q Consensus 264 ~~~~~~~i~~~~~~~~~-~-~~s~~---------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~ 332 (352)
..........+.+++++ . +++.. ..+.+.+++.... +++.+. ........++|+||++.
T Consensus 262 ~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~---------~vv~~i-~~g~~p~~i~~s~Dg~~ 331 (373)
T 2mad_H 262 DTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG---------QTSSQI-SLGHDVDAISVAQDGGP 331 (373)
T ss_pred cceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC---------EEEEEE-ECCCCcCeEEECCCCCe
Confidence 00001112223445543 2 22221 1245666644321 111111 12235789999999983
Q ss_pred eEEEec-CCCeEEEEeecc
Q 018675 333 LLASAS-DDGMIKIWELAN 350 (352)
Q Consensus 333 ~l~s~~-~Dg~i~iw~~~~ 350 (352)
+++++. .++.|.|+|++.
T Consensus 332 ~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 332 DLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EEEEEcCCCCeEEEEECCC
Confidence 444555 689999999865
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.05 E-value=2.3e-07 Score=79.67 Aligned_cols=204 Identities=11% Similarity=0.091 Sum_probs=125.9
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeee-eeeeecceecceEEEEECCCCCEEEEEeCC---
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNC-KAVLEEMHTRTVRSCAWSPSGKLLATASFD--- 95 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--- 95 (352)
+...+.++.+.|+. +.++++. .++.|.+|+.. ++. ... ...........+.+++++++|++.++...+
T Consensus 69 ~~~~~~~i~~~~~~-----g~l~v~~-~~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 140 (314)
T 1pjx_A 69 YGGIPAGCQCDRDA-----NQLFVAD-MRLGLLVVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVA 140 (314)
T ss_dssp EECCEEEEEECSSS-----SEEEEEE-TTTEEEEEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCT
T ss_pred CCCCCceEEEecCC-----CcEEEEE-CCCCEEEEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccc
Confidence 55678899998862 2344443 44578889876 432 111 100001122457899999999988876654
Q ss_pred ------------CcEEEEEccCCceeeeEeeccccCCeeEEEEC----CCCcEE-EEeeCCCcEEEEecCCCCeeE---E
Q 018675 96 ------------ATTCIWEDVGGDYECVATLEGHENEVKSVSWN----ASGTLL-ATCGRDKSVWIWEVMPGNEFE---C 155 (352)
Q Consensus 96 ------------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~----~~~~~l-~s~~~d~~v~vwd~~~~~~~~---~ 155 (352)
+.+..++.. +... .+..+......++|+ |+++.+ ++...++.|.+|++....... .
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~---~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~ 216 (314)
T 1pjx_A 141 PADYTRSMQEKFGSIYCFTTD-GQMI---QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKV 216 (314)
T ss_dssp TSCCCBTTSSSCEEEEEECTT-SCEE---EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEE
T ss_pred cccccccccCCCCeEEEECCC-CCEE---EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceE
Confidence 456555543 3322 122233456889999 998655 444567899999975222211 2
Q ss_pred EEEeecCc-cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEe
Q 018675 156 VSVLQGHA-QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCS 233 (352)
Q Consensus 156 ~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~ 233 (352)
...+..+. .....+++++++.++++...++.|..|+..... ....+. .+...+.+++|+|+++ ++++..
T Consensus 217 ~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~-----~~~~~~----~~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 217 WGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ-----PKMRIR----CPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp EEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS-----CSEEEE----CSSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc-----EeEEEe----CCCCCceeEEECCCCCEEEEEeC
Confidence 22233332 456788999999888887788899999754211 111121 2336788999999999 455556
Q ss_pred CCCcEEEEcCC
Q 018675 234 DDLTIKIWGAD 244 (352)
Q Consensus 234 ~dg~i~iwd~~ 244 (352)
.++.|..|+.+
T Consensus 288 ~~~~l~~~~~~ 298 (314)
T 1pjx_A 288 ENNAVWKFEWQ 298 (314)
T ss_dssp TTTEEEEEECS
T ss_pred CCCeEEEEeCC
Confidence 67889999865
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.03 E-value=3.3e-08 Score=86.60 Aligned_cols=274 Identities=10% Similarity=0.041 Sum_probs=149.9
Q ss_pred cceEEEEEccCCCCCCCccEEEEee--CCCeEEEEecCCCceeeeeee--eeecceecceEEEEECCCCCEEEEEeC---
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCS--GDKTVRIWEQSASSRFWNCKA--VLEEMHTRTVRSCAWSPSGKLLATASF--- 94 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s--~D~~v~~w~~~~~~~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~~~--- 94 (352)
.....++++|+ +.++++.. .++.++||.+.++ .+..... .....|-..+..++++++|++.++-..
T Consensus 17 ~~p~~va~~~~------g~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTPD------GRLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECTT------SCEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHH
T ss_pred CCcceEEECCC------CCEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCc
Confidence 67889999986 46788753 2343677766532 2211110 001124467899999999987776544
Q ss_pred --CCcEEEEEccCCceeeeEeec----cccCCeeEEEECCC-CcEEEEee---CCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 95 --DATTCIWEDVGGDYECVATLE----GHENEVKSVSWNAS-GTLLATCG---RDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 95 --d~~i~i~~~~~~~~~~~~~~~----~h~~~v~~v~~~~~-~~~l~s~~---~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
++.|.+||..+++......+. .+...+..+++.++ +..+++.. .++.|.+||+..+.. ...+.+|..
T Consensus 90 ~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~---~r~~~~~~~ 166 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA---ARVLQGYPG 166 (343)
T ss_dssp TSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE---EEECTTCTT
T ss_pred CCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE---EEEecCCCc
Confidence 578999998776532222221 12235688999975 44556655 678999999865542 233333321
Q ss_pred Cee-EEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 165 DVK-MVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 165 ~v~-~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
... ...+.+++..+.+.+.++.++.|. ..++.|+|+|+++.|..+..++. ++|.+
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~-----------------------~~~~gia~s~dg~~ly~~~~~~~-~l~~~ 222 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPH-----------------------LGVNGIVLDAENEWLYLSPMHST-SMYRI 222 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCC-----------------------CCEEEEEECTTSCEEEEEESSCS-EEEEE
T ss_pred ccccccceeECCEEEEeccCCCceecee-----------------------cccceeEeccCCCEEEEEeCCCC-eEEEE
Confidence 100 022334555555555666554441 23577999999998887776653 44543
Q ss_pred CccccccCC--CCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcc
Q 018675 244 DITRMQSGD--GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 320 (352)
Q Consensus 244 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 320 (352)
+........ ........... + +......+++++++ ++++...++.|..|+..... ...+.. ..+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~-g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~------~~~~~~--~~~~~~ 292 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERY-S-EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA------YKLLVT--DEKLSW 292 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEE-E-ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE------EEEEEE--CGGGSC
T ss_pred EHHHhcCCCCChhhhhcceEec-c-cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC------EEEEEE--CCceec
Confidence 221110000 00000000000 0 11123346667665 56666777889999762111 111111 123446
Q ss_pred eeEEEecCCCcceEEEecCC
Q 018675 321 VNSVQWSPGERRLLASASDD 340 (352)
Q Consensus 321 i~~~~~sp~~~~~l~s~~~D 340 (352)
.++++|.|+++ ++++.+..
T Consensus 293 p~~va~~~~g~-l~v~~~~~ 311 (343)
T 2qe8_A 293 TDSFNFGSDGY-LYFDCNQL 311 (343)
T ss_dssp EEEEEECTTSC-EEEEECCG
T ss_pred CCeeEECCCCc-EEEEeCcc
Confidence 88999999875 66666543
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.00 E-value=9.1e-07 Score=77.83 Aligned_cols=264 Identities=14% Similarity=0.050 Sum_probs=141.7
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe----------CCCcEEEEEccCCceeeeEeec--
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS----------FDATTCIWEDVGGDYECVATLE-- 115 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~i~~~~~~~~~~~~~~~-- 115 (352)
+++|.+.|..+.+...... . -..+ . ++++|||+.+.++. .++.+.+||..+.+. +..+.
T Consensus 58 ~~~V~ViD~~t~~v~~~I~----v-G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v--~~~I~v~ 128 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMID----G-GFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP--TADIELP 128 (386)
T ss_dssp SEEEEEEETTTTEEEEEEE----E-CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE--EEEEEET
T ss_pred CCEEEEEECCCCeEEEEEE----C-CCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE--EEEEECC
Confidence 7899999988765432221 1 1123 3 99999999876664 357899999877643 33332
Q ss_pred c--c---cCCeeEEEECCCCcEEEEeeC--CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEE
Q 018675 116 G--H---ENEVKSVSWNASGTLLATCGR--DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIK 188 (352)
Q Consensus 116 ~--h---~~~v~~v~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 188 (352)
. + ......+.++|+|++++.+.. +++|.++|+...+. +..+.- ..+ ...+......+++.+.||.+.
T Consensus 129 ~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v---v~tI~v--~g~-~~~~P~g~~~~~~~~~DG~~~ 202 (386)
T 3sjl_D 129 DAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF---KRMLDV--PDC-YHIFPTAPDTFFMHCRDGSLA 202 (386)
T ss_dssp TCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE---EEEEEC--CSE-EEEEEEETTEEEEEETTSCEE
T ss_pred CccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE---EEEEEC--CCc-ceeecCCCceeEEECCCCCEE
Confidence 1 0 124567999999998887763 68999999876543 333321 111 122322345667788888888
Q ss_pred EEecCCCCCCCceeEeeeeccCCCCcccEE-EEEE-cCCCCEEEEEeCCCcEEEEcCCccccccCCCC---------ccc
Q 018675 189 VWWAEDTDSDNWHCVQTISESNNGHSSTIW-ALSF-NAKGDKLVSCSDDLTIKIWGADITRMQSGDGY---------ASW 257 (352)
Q Consensus 189 iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~-~l~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~ 257 (352)
+.++....... .+.......-..++. ...| .++|+++. .+.+|+|.+.|+........... ..|
T Consensus 203 ~v~~~~~g~v~----~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~ 277 (386)
T 3sjl_D 203 KVAFGTEGTPE----ITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGW 277 (386)
T ss_dssp EEECCSSSCCE----EEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTE
T ss_pred EEECCCCCeEE----EeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccc
Confidence 87765421110 000000000111221 1345 36776554 44579999998743211100000 001
Q ss_pred eeeEEeecccCcceEEEEecCCc--eEEecC---------CCCeEEEEEccCCccccCcccceeeecccccCcceeEEEe
Q 018675 258 RHLCTISGYHDRTIFSVHWSREG--IIASGA---------ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQW 326 (352)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~---------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 326 (352)
++ ...... ..++++ .+++.. ..+.|.+++.... +.+.....+ ..++.+++
T Consensus 278 ~p-------~g~q~~--a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~--------kv~~~i~vg--~~~~~lav 338 (386)
T 3sjl_D 278 RP-------GGWQQV--AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--------ERLAKFEMG--HEIDSINV 338 (386)
T ss_dssp EE-------CSSSCE--EEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC--------CEEEEEEEE--EEECEEEE
T ss_pred cC-------CCccee--eECCCCCeEEEEeccccccccCCCCCEEEEEECCCC--------eEEEEEECC--CCcceEEE
Confidence 10 011122 223332 222211 1134555544321 122111222 36889999
Q ss_pred cCCCc-ceEEEecCCCeEEEEeecc
Q 018675 327 SPGER-RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 327 sp~~~-~~l~s~~~Dg~i~iw~~~~ 350 (352)
+||++ .++++...++.|.|+|..+
T Consensus 339 s~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 339 SQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp CSSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCCCCeEEEEEcCCCCeEEEEECCC
Confidence 99986 5666677899999999864
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.94 E-value=1.3e-06 Score=75.03 Aligned_cols=203 Identities=14% Similarity=0.088 Sum_probs=123.1
Q ss_pred eecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC
Q 018675 16 TLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD 95 (352)
Q Consensus 16 ~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 95 (352)
.+..+.....+..|.|+. ..++++...++.|..|+...... .+ ..+...+..++++++|+++++...+
T Consensus 39 ~l~~~~~~~egp~~~~~g-----~~l~~~d~~~~~i~~~~~~g~~~------~~-~~~~~~~~gl~~d~dG~l~v~~~~~ 106 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQ-----RTLVWSDLVGRRVLGWREDGTVD------VL-LDATAFTNGNAVDAQQRLVHCEHGR 106 (305)
T ss_dssp EEECCCSSEEEEEEEGGG-----TEEEEEETTTTEEEEEETTSCEE------EE-EESCSCEEEEEECTTSCEEEEETTT
T ss_pred EEecCCcCccCCeEeCCC-----CEEEEEECCCCEEEEEeCCCCEE------EE-eCCCCccceeeECCCCCEEEEECCC
Confidence 344455667789999973 13677877889999998743211 11 1234568899999999977766566
Q ss_pred CcEEEEEccCCceeeeEe-eccc-cCCeeEEEECCCCcEEEE----eeC-------------CCcEEEEecCCCCeeEEE
Q 018675 96 ATTCIWEDVGGDYECVAT-LEGH-ENEVKSVSWNASGTLLAT----CGR-------------DKSVWIWEVMPGNEFECV 156 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~-~~~h-~~~v~~v~~~~~~~~l~s----~~~-------------d~~v~vwd~~~~~~~~~~ 156 (352)
+.|.+|+.. +....+.. ..+. ...++.+.+.++|.++++ |.. .+.|..+|...+.. ..+
T Consensus 107 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-~~~ 184 (305)
T 3dr2_A 107 RAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-QRM 184 (305)
T ss_dssp TEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-EEE
T ss_pred CEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-EEE
Confidence 789888764 43322221 1111 234678999999998886 332 24566666533332 222
Q ss_pred EEeecCccCeeEEEEcCCCCEEEEEeCC------CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEE
Q 018675 157 SVLQGHAQDVKMVQWHPTMDVLFSCSYD------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLV 230 (352)
Q Consensus 157 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~ 230 (352)
. .......++|+|+++.|+.+... +.|..|++.... ......+... .......+.++++|++.+
T Consensus 185 ~----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~---l~~~~~~~~~---~~~~pdgi~~d~~G~lwv 254 (305)
T 3dr2_A 185 A----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA---LHDRRHFASV---PDGLPDGFCVDRGGWLWS 254 (305)
T ss_dssp E----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE---EEEEEEEECC---SSSCCCSEEECTTSCEEE
T ss_pred e----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC---ccCCeEEEEC---CCCCCCeEEECCCCCEEE
Confidence 1 22345788999999977776655 678888764321 1111111111 112344678999999666
Q ss_pred EEeCCCcEEEEcCC
Q 018675 231 SCSDDLTIKIWGAD 244 (352)
Q Consensus 231 s~~~dg~i~iwd~~ 244 (352)
+. .+ .|.+|+.+
T Consensus 255 ~~-~~-gv~~~~~~ 266 (305)
T 3dr2_A 255 SS-GT-GVCVFDSD 266 (305)
T ss_dssp CC-SS-EEEEECTT
T ss_pred ec-CC-cEEEECCC
Confidence 55 44 48888753
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.79 E-value=1.1e-05 Score=68.82 Aligned_cols=192 Identities=10% Similarity=0.056 Sum_probs=114.6
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC-----
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD----- 95 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----- 95 (352)
...+.+++++|+ +.++++ . ++.|.+|+..++... .............++.++++|+|++.++...+
T Consensus 53 ~~~~~~i~~~~d------G~l~v~-~-~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~ 123 (297)
T 3g4e_A 53 DAPVSSVALRQS------GGYVAT-I-GTKFCALNWKEQSAV-VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPA 123 (297)
T ss_dssp SSCEEEEEEBTT------SSEEEE-E-TTEEEEEETTTTEEE-EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTT
T ss_pred CCceEEEEECCC------CCEEEE-E-CCeEEEEECCCCcEE-EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccc
Confidence 467889999986 355444 3 568889998765321 11110000112457899999999977754322
Q ss_pred ----CcEEEEEccC-CceeeeEeeccccCCeeEEEECCCCcEE-EEeeCCCcEEEEecC--CCCee--EEEEEeecCccC
Q 018675 96 ----ATTCIWEDVG-GDYECVATLEGHENEVKSVSWNASGTLL-ATCGRDKSVWIWEVM--PGNEF--ECVSVLQGHAQD 165 (352)
Q Consensus 96 ----~~i~i~~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~v~vwd~~--~~~~~--~~~~~~~~h~~~ 165 (352)
....+|.... +... .+..+....+.++|+|+++.| ++.+.++.|.+|++. .+... .....+..+...
T Consensus 124 ~~~~~~~~l~~~d~~g~~~---~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~ 200 (297)
T 3g4e_A 124 VLERHQGALYSLFPDHHVK---KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI 200 (297)
T ss_dssp BCCTTCEEEEEECTTSCEE---EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCE
T ss_pred cccCCCcEEEEEECCCCEE---EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCC
Confidence 3345665432 2221 122233456889999999865 455667889999873 23211 112222223345
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc-CCCCEEEEEe
Q 018675 166 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN-AKGDKLVSCS 233 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~-~~~~~l~s~~ 233 (352)
...+++.+++.+.++....+.|..|+.... .....+. .+...+.+++|. |+++.|...+
T Consensus 201 p~g~~~d~~G~lwva~~~~~~v~~~d~~tG-----~~~~~i~----~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 201 PDGMCIDAEGKLWVACYNGGRVIRLDPVTG-----KRLQTVK----LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEEEBTTSCEEEEEETTTEEEEECTTTC-----CEEEEEE----CSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCeeEECCCCCEEEEEcCCCEEEEEcCCCc-----eEEEEEE----CCCCCceEEEEeCCCCCEEEEEc
Confidence 678889999987777777888999965321 1223332 233568999998 7876654443
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.78 E-value=1.9e-06 Score=77.04 Aligned_cols=279 Identities=12% Similarity=0.025 Sum_probs=145.4
Q ss_pred EEEEeeCC----CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe----------CCCcEEEEEccCC
Q 018675 41 VFASCSGD----KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS----------FDATTCIWEDVGG 106 (352)
Q Consensus 41 ~l~s~s~D----~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~i~~~~~~ 106 (352)
.+++...+ ++|.+.|..+.+....... -..+ .++++|||+.|.++. .++.|.++|..+.
T Consensus 87 vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v-----G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 87 VYIQDPAHFAAITQQFVIDGSTGRILGMTDG-----GFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEE-----CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred EEEECCCcCCCCCeEEEEECCCCEEEEEEEC-----CCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 44444444 7999999988754333221 1123 789999999877765 3678999987766
Q ss_pred ceeeeEeec--c---ccCCeeEEEECCCCcEEEEeeC--CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCC-CEE
Q 018675 107 DYECVATLE--G---HENEVKSVSWNASGTLLATCGR--DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTM-DVL 178 (352)
Q Consensus 107 ~~~~~~~~~--~---h~~~v~~v~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l 178 (352)
+......+. . .......+.++|+|++++.+.. +++|.+.|+...+.. ..+.- ... ....|++ ..+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv---~~I~v--~g~--~~~~p~g~~~~ 232 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD---RMLDV--PDC--YHIFPASPTVF 232 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE---EEEEC--CSE--EEEEEEETTEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE---EEEEc--CCc--eeeccCCCcEE
Confidence 432222221 0 0123567899999999888874 578999998765432 22221 111 2223332 455
Q ss_pred EEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccce
Q 018675 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258 (352)
Q Consensus 179 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (352)
++.+.|+.+.+.+.... .........+. .+.......+.+.+++..++.....+.+.+.|......... ..+.
T Consensus 233 v~~~~dG~~~~V~~~~~-~v~~~~~~~~~---v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~---~~~~ 305 (426)
T 3c75_H 233 YMNCRDGSLARVDFADG-ETKVTNTEVFH---TEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFR---APIE 305 (426)
T ss_dssp EEEETTSSEEEEECCTT-CCEEEECCCCS---CTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEEC---CCEE
T ss_pred EEEcCCCCEEEEECCCC-cEEEEeeeeec---cCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEe---eeee
Confidence 66667777766655211 10000000010 00011111246788888777667788898888642211000 0000
Q ss_pred eeE--Ee-ecccCcceEEEEecCCc--eEEecC---------CCCeEEEEEccCCccccCcccceeeecccccCcceeEE
Q 018675 259 HLC--TI-SGYHDRTIFSVHWSREG--IIASGA---------ADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSV 324 (352)
Q Consensus 259 ~~~--~~-~~~~~~~i~~~~~~~~~--~~~s~~---------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 324 (352)
... .. .+........+.+++++ .+++.. ..+.+.+++...... +.... -......+
T Consensus 306 ~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv---------v~~I~-vg~~P~gi 375 (426)
T 3c75_H 306 ALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER---------INKIE-LGHEIDSI 375 (426)
T ss_dssp SSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE---------EEEEE-EEEEECEE
T ss_pred eccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE---------EEEEE-CCCCcCeE
Confidence 000 00 00000000112344443 233221 124577775433211 11111 11257899
Q ss_pred EecCCCc-ceEEEecCCCeEEEEeecc
Q 018675 325 QWSPGER-RLLASASDDGMIKIWELAN 350 (352)
Q Consensus 325 ~~sp~~~-~~l~s~~~Dg~i~iw~~~~ 350 (352)
+|+||++ .++++...++.|.|+|+.+
T Consensus 376 a~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 376 NVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred EEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 9999998 6666665799999999864
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.68 E-value=0.00015 Score=63.97 Aligned_cols=243 Identities=9% Similarity=0.007 Sum_probs=133.8
Q ss_pred EEEEccCCCCCCCccEEEEee----------CCCeEEEEecCCCceeeeeeee--eecceecceEEEEECCCCCEEEEEe
Q 018675 26 SLAWKPTAGVDGVAPVFASCS----------GDKTVRIWEQSASSRFWNCKAV--LEEMHTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s----------~D~~v~~w~~~~~~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~~ 93 (352)
.+.++|+ +++++.+. .++.|.+||..+.+........ -+..+...-..++|+|||++|.++.
T Consensus 70 ~i~~spD------g~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 70 NPVAAHS------GSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred CeEECCC------CCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEe
Confidence 7888987 45666664 3788999998765432221100 0000012235789999999999887
Q ss_pred C--CCcEEEEEccCCceeeeEe-eccccCCeeEEEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEE--eecCccCe-
Q 018675 94 F--DATTCIWEDVGGDYECVAT-LEGHENEVKSVSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSV--LQGHAQDV- 166 (352)
Q Consensus 94 ~--d~~i~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~--~~~h~~~v- 166 (352)
. ++.|.++| .+++. +.. +.. .+ ++.+.|++ ..+++.+.|+++.++|. .++....... .......+
T Consensus 144 ~~~~~~v~viD-~t~~~--~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~ 215 (373)
T 2mad_H 144 FAAGPAVGLVV-QGGSS--DDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLL 215 (373)
T ss_pred cCCCCeEEEEE-CCCCE--EeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCccee
Confidence 4 47899999 77643 333 321 11 24445554 45677888999999998 5543311110 00111111
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc------CCCCcccEEEEEEcCCCCEEEEEeC------
Q 018675 167 KMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES------NNGHSSTIWALSFNAKGDKLVSCSD------ 234 (352)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~------~~~h~~~i~~l~~~~~~~~l~s~~~------ 234 (352)
....+.+++..++..+.++.+.+.|...... .....+... ..........+.++|++..+.....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~---~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~ 292 (373)
T 2mad_H 216 TQPAQANKSGRIVWPVYSGKILQADISAAGA---TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWK 292 (373)
T ss_pred ecceeEecCCEEEEEcCCceEEEEeccCCcc---eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCccc
Confidence 2234555555444444677888887643211 111111100 0001122444778999887666543
Q ss_pred ----CCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc--eEEecC-CCCeEEEEEccC
Q 018675 235 ----DLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGA-ADDSVQFFVESK 298 (352)
Q Consensus 235 ----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~-~d~~v~~~~~~~ 298 (352)
++.|.++|....+ ....+. .......+.+++++ .++++. .++.+.+++...
T Consensus 293 ~~~~~~~V~VID~~t~~-----------vv~~i~--~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 293 LHAAAKEVTSVTGLVGQ-----------TSSQIS--LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred ccCCCCeEEEEECCCCE-----------EEEEEE--CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 3578888875322 222222 12346778888876 355555 578999987643
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.60 E-value=6.3e-05 Score=65.06 Aligned_cols=190 Identities=11% Similarity=0.023 Sum_probs=111.3
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeec-ceecceEEEEECCCCCEEEEEeCC----
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE-MHTRTVRSCAWSPSGKLLATASFD---- 95 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d---- 95 (352)
...+.++.|.|+ +.++++. .+ .|.+|+..++... ... .... .....++++.++|+|++.++...+
T Consensus 89 ~~~v~~i~~~~d------g~l~v~~-~~-gl~~~d~~~g~~~-~~~-~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~ 158 (326)
T 2ghs_A 89 PFMGSALAKISD------SKQLIAS-DD-GLFLRDTATGVLT-LHA-ELESDLPGNRSNDGRMHPSGALWIGTMGRKAET 158 (326)
T ss_dssp SSCEEEEEEEET------TEEEEEE-TT-EEEEEETTTCCEE-EEE-CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCT
T ss_pred CCcceEEEEeCC------CeEEEEE-CC-CEEEEECCCCcEE-EEe-eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCC
Confidence 357889999886 3555553 44 4888988665421 111 0100 112468899999999977755422
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEE-EeeCCCcEEEEecC--CC-Ce--eEEEEEeecCccCeeEE
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLA-TCGRDKSVWIWEVM--PG-NE--FECVSVLQGHAQDVKMV 169 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~v~vwd~~--~~-~~--~~~~~~~~~h~~~v~~~ 169 (352)
+...||...+++... +..+......++|+|+++.++ +.+.++.|.+||+. .+ .. ......+.........+
T Consensus 159 ~~~~l~~~~~g~~~~---~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi 235 (326)
T 2ghs_A 159 GAGSIYHVAKGKVTK---LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGS 235 (326)
T ss_dssp TCEEEEEEETTEEEE---EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEE
T ss_pred CceEEEEEeCCcEEE---eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCee
Confidence 233444333333222 222334577899999998654 44557889999975 33 11 11222222223345678
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEc-CCCCEEEEEe
Q 018675 170 QWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFN-AKGDKLVSCS 233 (352)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~-~~~~~l~s~~ 233 (352)
.+.+++.+.++...++.|..|+... .....+. .+...+.+++|. +++..|..++
T Consensus 236 ~~d~~G~lwva~~~~~~v~~~d~~g------~~~~~i~----~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 236 VCDAEGHIWNARWGEGAVDRYDTDG------NHIARYE----VPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EECTTSCEEEEEETTTEEEEECTTC------CEEEEEE----CSCSBEEEEEEESTTSCEEEEEE
T ss_pred EECCCCCEEEEEeCCCEEEEECCCC------CEEEEEE----CCCCCcEEEEEecCCCCEEEEEe
Confidence 8899998777766678899996521 1122222 233468999998 8877664443
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.56 E-value=7e-06 Score=78.84 Aligned_cols=204 Identities=12% Similarity=0.126 Sum_probs=110.7
Q ss_pred cccCCeeEEEECCCCcEEEE-----eeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCc----
Q 018675 116 GHENEVKSVSWNASGTLLAT-----CGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNT---- 186 (352)
Q Consensus 116 ~h~~~v~~v~~~~~~~~l~s-----~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~---- 186 (352)
+|...+..++|+|+|++|+- |+++.+|++||+..+..... .+.. .....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLKD--VKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEEE--EESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccCC--ceeccEEEe-CCCEEEEEEecCccccc
Confidence 34456888899999998773 33446899999987653221 1111 112467899 9998888887743
Q ss_pred ---------EEEEecCCCCCCCceeEeeeeccCCC-CcccEEEEEEcCCCCEEEEEe----CCCcEEEEcCCccccccCC
Q 018675 187 ---------IKVWWAEDTDSDNWHCVQTISESNNG-HSSTIWALSFNAKGDKLVSCS----DDLTIKIWGADITRMQSGD 252 (352)
Q Consensus 187 ---------i~iw~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~l~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~ 252 (352)
|.+|++...... -..+. .... |.....++.++|+|++|+... .++.|.++|++...
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~-~~~v~----~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~----- 270 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQED-DRLVF----GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN----- 270 (693)
T ss_dssp ----CCCCEEEEEETTSCGGG-CEEEE----SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT-----
T ss_pred ccccCCCcEEEEEECCCCccc-ceEEE----ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC-----
Confidence 788876543211 11111 1122 344577899999999875433 23478888864321
Q ss_pred CCccceeeEEeecccCcceEEEEecCCc-eEEecCCC---CeEEEEEccCCccccCcccceeeecccccCcceeEEEecC
Q 018675 253 GYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAAD---DSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSP 328 (352)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d---~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 328 (352)
..+. .+.. +..........+++ +++....+ ..+..++...... .... ....|...+. .|+|
T Consensus 271 --~~~~---~l~~-~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~---~~~~----~l~~~~~~~~--~~s~ 335 (693)
T 3iuj_A 271 --APLL---TVQG-DLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP---AHWR----DLIPERQQVL--TVHS 335 (693)
T ss_dssp --CCCE---EEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG---GGCE----EEECCCSSCE--EEEE
T ss_pred --CceE---EEeC-CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc---cccE----EEecCCCCEE--EEEE
Confidence 0111 1111 11122222112233 33333332 4566665432111 0011 2234444454 8888
Q ss_pred CCcceEEEecCCC--eEEEEeec
Q 018675 329 GERRLLASASDDG--MIKIWELA 349 (352)
Q Consensus 329 ~~~~~l~s~~~Dg--~i~iw~~~ 349 (352)
++..++++...|+ .|++|++.
T Consensus 336 ~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 336 GSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp ETTEEEEEEEETTEEEEEEECTT
T ss_pred ECCEEEEEEEECCeeEEEEEECC
Confidence 8877776666676 47777654
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.54 E-value=3.9e-08 Score=87.04 Aligned_cols=178 Identities=11% Similarity=0.089 Sum_probs=92.2
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
+..+++++.|+.|..||..+++..|+... ..+.+..+..+++.+++++.|+.+..||..+++. +..+..+.
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~--~w~~~~~~ 79 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG--LTKLPFTI 79 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-------CCSCCCC-----CCEEECTTTCCEEEC-----CC--SEECSCCH
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-------CCceecceEcCCCEEEEeCCCCEEEEEECCCCce--eeeeeccC
Confidence 46889999999999999999988776532 2344444556777888888999999999866643 12222111
Q ss_pred C-CeeE-EEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 018675 119 N-EVKS-VSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTD 196 (352)
Q Consensus 119 ~-~v~~-v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 196 (352)
. .+.+ ..+ ..+..+++++.|+.+..||...++. +..+..+. ...++|++..+++++.|+.+..||.....
T Consensus 80 ~~~~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~---~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 80 PELVQASPCR-SSDGILYMGKKQDIWYVIDLLTGEK---QQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECCCSSSSS
T ss_pred ccccccCceE-ecCCEEEEEeCCCEEEEEECCCCcE---EEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 1 1110 011 1345678888999999999876643 22222222 13456777888999999999999865432
Q ss_pred CCCceeEeeeeccCCCCcccEEEEEEcCCC---CEEEEEeCCCcEEEEcCC
Q 018675 197 SDNWHCVQTISESNNGHSSTIWALSFNAKG---DKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~---~~l~s~~~dg~i~iwd~~ 244 (352)
..|... .. ......+.++. ..++.++.||.+..||.+
T Consensus 152 -~~W~~~--~~--------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 152 -LRWNAT--YF--------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp -CCCEEE--EE--------EECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred -EEEeEe--cc--------cccCccccCCccccceEEEECCCCEEEEEECC
Confidence 123211 10 01112233322 456778889999999875
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.45 E-value=5.7e-05 Score=65.83 Aligned_cols=205 Identities=11% Similarity=0.027 Sum_probs=122.4
Q ss_pred CCccceEEEEEccCCCCCCCccEEEEeeC-----CCeEEEEecCCCceeeeeeee-eecceecceEEEEECCCC-CEEEE
Q 018675 19 GHTDRVWSLAWKPTAGVDGVAPVFASCSG-----DKTVRIWEQSASSRFWNCKAV-LEEMHTRTVRSCAWSPSG-KLLAT 91 (352)
Q Consensus 19 gH~~~V~~i~~~p~~~~~~~~~~l~s~s~-----D~~v~~w~~~~~~~~~~~~~~-~~~~h~~~v~~~~~s~~~-~~l~s 91 (352)
+|...+.++++.|+ +.++++-.. ++.|.+||+.+++........ ....+...+..+++++++ ..+++
T Consensus 64 ~~~~~p~gv~~d~~------g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 64 ITFDTVLGIKSDGN------GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp CCCSCEEEEEECSS------SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEE
T ss_pred cceeEeeEEEEcCC------CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEE
Confidence 46678999999886 345554333 578999998776422111100 000122356889999864 55566
Q ss_pred Ee---CCCcEEEEEccCCceeeeEeeccc-----------------------------cCCeeEEEECCCCcEEEEeeCC
Q 018675 92 AS---FDATTCIWEDVGGDYECVATLEGH-----------------------------ENEVKSVSWNASGTLLATCGRD 139 (352)
Q Consensus 92 ~~---~d~~i~i~~~~~~~~~~~~~~~~h-----------------------------~~~v~~v~~~~~~~~l~s~~~d 139 (352)
.. .++.|.+||..+++. ...+.+| ...+..++|+|+++.|+.+..+
T Consensus 138 d~~~~~~~~i~v~d~~~g~~--~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 138 DPAPDDKAALIRVDLQTGLA--ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH 215 (343)
T ss_dssp ECCSGGGCEEEEEETTTCCE--EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS
T ss_pred cCccCCCCeEEEEECCCCCE--EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC
Confidence 55 678899999765542 2222221 1236789999999888877766
Q ss_pred CcEEEEecC-----CCC--eeE---EEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc
Q 018675 140 KSVWIWEVM-----PGN--EFE---CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES 209 (352)
Q Consensus 140 ~~v~vwd~~-----~~~--~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 209 (352)
+. ++|.+. .+. ... .+. ..++......+++++++.++++...++.|.+|+.... .. ..+..
T Consensus 216 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G---~~---~~~~~- 286 (343)
T 2qe8_A 216 ST-SMYRIKSADLSNLQLTDAELGSKIE-RYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR---AY---KLLVT- 286 (343)
T ss_dssp CS-EEEEEEHHHHTCTTCCHHHHHTTCE-EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT---EE---EEEEE-
T ss_pred CC-eEEEEEHHHhcCCCCChhhhhcceE-ecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC---CE---EEEEE-
Confidence 53 445432 110 000 000 1122234556889999998888888999999986221 11 12211
Q ss_pred CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 210 NNGHSSTIWALSFNAKGDKLVSCSDDLTIKIW 241 (352)
Q Consensus 210 ~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iw 241 (352)
..+...+.+++|.+++.++++.+..+++.+|
T Consensus 287 -~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 287 -DEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp -CGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred -CCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 1124568899999999888887765555444
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.45 E-value=2.3e-05 Score=68.80 Aligned_cols=274 Identities=10% Similarity=-0.048 Sum_probs=141.3
Q ss_pred cEEEEeeCCC----eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe----------CCCcEEEEEccC
Q 018675 40 PVFASCSGDK----TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS----------FDATTCIWEDVG 105 (352)
Q Consensus 40 ~~l~s~s~D~----~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----------~d~~i~i~~~~~ 105 (352)
..+++...++ +|.+.|..+.+...+.. . -..+ .+.++|||+.+.++. .++.|.+||..+
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~----v-G~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T 105 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSL----G-AFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT 105 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEE----E-CTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEe----C-CCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 4566666566 78899988775432221 1 1124 699999999888775 367899999877
Q ss_pred CceeeeEeeccc-------cCCeeEEEECCCCcEEEEeeC--CCcEEE--EecCCCCeeEEEEEeecCccCeeEEEEcCC
Q 018675 106 GDYECVATLEGH-------ENEVKSVSWNASGTLLATCGR--DKSVWI--WEVMPGNEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 106 ~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~~~--d~~v~v--wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
.+. +.++.-. ......+.++|+|++++.+.. +..+.+ +|... ...+.. + .+ ....|+
T Consensus 106 ~~v--v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v--~---~~--~~~~p~ 173 (368)
T 1mda_H 106 FLP--IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS--A---SC--FHIHPG 173 (368)
T ss_dssp CCE--EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC--S---SC--CCCEEE
T ss_pred CCE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC--C---Cc--eEEccC
Confidence 643 4443211 123568999999999888864 467888 88743 121111 1 11 112343
Q ss_pred C-CEEEEEeCCCcEEEEecCCCCCCCceeEeee-eccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc--ccc
Q 018675 175 M-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI-SESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR--MQS 250 (352)
Q Consensus 175 ~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~-~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~ 250 (352)
+ ..+++.+.|+.+.+.+.........+..... .....+ ..+. . .+++..++-.+. +.+.+.|+.... ...
T Consensus 174 g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg-~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~ 247 (368)
T 1mda_H 174 AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCS-SQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKA 247 (368)
T ss_dssp ETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBC-SCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEEC
T ss_pred CCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCC-CCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEE
Confidence 3 3445566777777766543111000000000 000011 1232 2 555555555555 888888864211 100
Q ss_pred CCCCccceeeEEeecccCcceEEEEecCCc--eEEecC---C-----CCeEEEEEccCCccccCcccceeeecccccCcc
Q 018675 251 GDGYASWRHLCTISGYHDRTIFSVHWSREG--IIASGA---A-----DDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMD 320 (352)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~---~-----d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 320 (352)
......-... ..+........+.+++++ .+++.. . ++.+.+++..... .+...... ..
T Consensus 248 ~~~~~~~~~~--~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~---------vv~~i~vg-~~ 315 (368)
T 1mda_H 248 AIDGNESGRK--ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---------TSGPISNG-HD 315 (368)
T ss_dssp CCCSSCTHHH--HTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---------EEECCEEE-EE
T ss_pred EEEecccccc--ccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe---------EEEEEECC-CC
Confidence 0000000000 000000000013445543 333322 1 2344466543321 11212111 25
Q ss_pred eeEEEecCCCcceEEEec-CCCeEEEEeecc
Q 018675 321 VNSVQWSPGERRLLASAS-DDGMIKIWELAN 350 (352)
Q Consensus 321 i~~~~~sp~~~~~l~s~~-~Dg~i~iw~~~~ 350 (352)
...++|+||+++++++.. .+++|.|+|+.+
T Consensus 316 p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 316 SDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred cceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 889999999987888888 699999999865
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.42 E-value=4.1e-05 Score=68.10 Aligned_cols=197 Identities=12% Similarity=0.158 Sum_probs=119.5
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeee------cceecceEEEEECCCCCEEEEEeCC------CcEEEEEccCC
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLE------EMHTRTVRSCAWSPSGKLLATASFD------ATTCIWEDVGG 106 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~------~~h~~~v~~~~~s~~~~~l~s~~~d------~~i~i~~~~~~ 106 (352)
..+++++..+.+|.++|..+.....+....++ +.-...-..+..+|+| +++++..+ +.+.++|..+.
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 35677888899999999864311112222221 1111234567789999 77776655 68999887765
Q ss_pred ceeeeEeec--cccC-CeeEEEECCCCcEEEEee-------------------CCCcEEEEecCCCCeeEEEEEeecC--
Q 018675 107 DYECVATLE--GHEN-EVKSVSWNASGTLLATCG-------------------RDKSVWIWEVMPGNEFECVSVLQGH-- 162 (352)
Q Consensus 107 ~~~~~~~~~--~h~~-~v~~v~~~~~~~~l~s~~-------------------~d~~v~vwd~~~~~~~~~~~~~~~h-- 162 (352)
+ .+..+. .... --..+.|+|+++.+++.. .+.+|.+||+...+ .+..+.-.
T Consensus 175 ~--v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k---~~~tI~vg~~ 249 (462)
T 2ece_A 175 E--PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK---RIHSLTLGEE 249 (462)
T ss_dssp C--EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE---EEEEEESCTT
T ss_pred e--EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc---EeeEEecCCC
Confidence 4 344443 1211 123578899999988885 36899999997542 23333321
Q ss_pred ccCeeEEEE--cCCCCEEEEEeC------CCcEEEEecCCCCCCCceeEeeeeccC---CC-----------CcccEEEE
Q 018675 163 AQDVKMVQW--HPTMDVLFSCSY------DNTIKVWWAEDTDSDNWHCVQTISESN---NG-----------HSSTIWAL 220 (352)
Q Consensus 163 ~~~v~~~~~--~~~~~~l~s~~~------d~~i~iw~~~~~~~~~~~~~~~~~~~~---~~-----------h~~~i~~l 220 (352)
......+.| +|++++++++.+ +++|.+|.... ..+...+.+.... .+ -......+
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~---g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED---GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET---TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC---CceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 122345555 999998777764 55777765432 3344333321000 00 02346778
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEcCC
Q 018675 221 SFNAKGDKLVSCS-DDLTIKIWGAD 244 (352)
Q Consensus 221 ~~~~~~~~l~s~~-~dg~i~iwd~~ 244 (352)
.++|||++|..+. ..+.|.+||+.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECS
T ss_pred EECCCCCEEEEEeCCCCEEEEEEec
Confidence 9999999877665 46899999874
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.36 E-value=0.00023 Score=62.64 Aligned_cols=246 Identities=10% Similarity=0.069 Sum_probs=133.1
Q ss_pred EEECCCCCEEEEEeC-----CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee----------CCCcEEE
Q 018675 80 CAWSPSGKLLATASF-----DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG----------RDKSVWI 144 (352)
Q Consensus 80 ~~~s~~~~~l~s~~~-----d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~v~v 144 (352)
....|+++.+.+... ++.+.+.|..+.+ .+..+..-..+ . +.++|+|++++.+. .++.|.+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~--v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGR--VIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTE--EEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCe--EEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 345789988777665 5789999877654 34444432333 4 99999999877765 3678999
Q ss_pred EecCCCCeeEEEEEeec-C---ccCeeEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEE
Q 018675 145 WEVMPGNEFECVSVLQG-H---AQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIW 218 (352)
Q Consensus 145 wd~~~~~~~~~~~~~~~-h---~~~v~~~~~~~~~~~l~s~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 218 (352)
||.........+..-.+ + ...-..+.++|++++++++.. ++.|.++|.... +...++.. .+ .
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~-----~vv~tI~v--~g----~- 181 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK-----AFKRMLDV--PD----C- 181 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT-----EEEEEEEC--CS----E-
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC-----cEEEEEEC--CC----c-
Confidence 99876654333322110 0 113456889999999888864 688999976543 33344421 11 1
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEcCCc-cccccCCCCccceeeEEeecccCcceE-EEEe-cCCceEEecCCCCeEEEEE
Q 018675 219 ALSFNAKGDKLVSCSDDLTIKIWGADI-TRMQSGDGYASWRHLCTISGYHDRTIF-SVHW-SREGIIASGAADDSVQFFV 295 (352)
Q Consensus 219 ~l~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~-~~~~~~~s~~~d~~v~~~~ 295 (352)
...+....+.+++.+.||.+.+.++.. .+... ... .........++ ...+ .+++.++-.+.++.+++.+
T Consensus 182 ~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~-------~~~-~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d 253 (386)
T 3sjl_D 182 YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI-------THT-EVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQID 253 (386)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEECCSSSCCEE-------EEC-CCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEE
T ss_pred ceeecCCCceeEEECCCCCEEEEECCCCCeEEE-------eec-ceeccccccccccceeEcCCCcEEEEeCCCEEEEEE
Confidence 122322345667778888888887653 22100 000 00000011111 1133 2456444455578888887
Q ss_pred ccCCccccCcccceeee----cccccCcceeEEEecCCCcceEEEecC---------CCeEEEEeecc
Q 018675 296 ESKDDLIDGPSYKMLLK----KEKAHDMDVNSVQWSPGERRLLASASD---------DGMIKIWELAN 350 (352)
Q Consensus 296 ~~~~~~~~~~~~~~~~~----~~~~h~~~i~~~~~sp~~~~~l~s~~~---------Dg~i~iw~~~~ 350 (352)
.......-... ..+.. ..-..-..+..++++|++.+++++-.. .+.|-+.|+.+
T Consensus 254 ~~~~~~~v~~~-~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t 320 (386)
T 3sjl_D 254 LSSGDAKFLPA-VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT 320 (386)
T ss_dssp CTTSSCEECCC-EESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred CCCCcceeecc-eeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC
Confidence 64322100000 00000 000112334567788988888876432 24566666644
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.32 E-value=0.00025 Score=63.09 Aligned_cols=186 Identities=8% Similarity=0.146 Sum_probs=111.8
Q ss_pred EEEEeeCC------CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe-------------------CC
Q 018675 41 VFASCSGD------KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS-------------------FD 95 (352)
Q Consensus 41 ~l~s~s~D------~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-------------------~d 95 (352)
+++++..+ +.+.+.|..+.+...+.. ....-...-+.+.|+|+++.+++.. ..
T Consensus 150 i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~--~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~ 227 (462)
T 2ece_A 150 IYISALGNEEGEGPGGILMLDHYSFEPLGKWE--IDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYG 227 (462)
T ss_dssp EEEEEEEETTSCSCCEEEEECTTTCCEEEECC--SBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSC
T ss_pred EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEc--cCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccC
Confidence 77787766 789999988765322211 0011112235678899999888874 36
Q ss_pred CcEEEEEccCCceeeeEeecc--ccCCeeEEEE--CCCCcEEEEee------CCCcEEEEecCCCCeeEEEEEe--ecC-
Q 018675 96 ATTCIWEDVGGDYECVATLEG--HENEVKSVSW--NASGTLLATCG------RDKSVWIWEVMPGNEFECVSVL--QGH- 162 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~--h~~~v~~v~~--~~~~~~l~s~~------~d~~v~vwd~~~~~~~~~~~~~--~~h- 162 (352)
.+|.+||..+.+ .+.++.- .......+.| +|++++++.+. .+++|.+|.... ........+ ...
T Consensus 228 d~V~v~D~~~~k--~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~ 304 (462)
T 2ece_A 228 NRIHFWDLRKRK--RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEP 304 (462)
T ss_dssp CEEEEEETTTTE--EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEE
T ss_pred CEEEEEECCCCc--EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCcc
Confidence 899999987653 3334432 1234556666 99999866665 567888776543 222222211 110
Q ss_pred ---------------ccCeeEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceeEeeeeccCC----CC------ccc
Q 018675 163 ---------------AQDVKMVQWHPTMDVLFSCSY-DNTIKVWWAEDTDSDNWHCVQTISESNN----GH------SST 216 (352)
Q Consensus 163 ---------------~~~v~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~----~h------~~~ 216 (352)
......+.++|++++|.++.. .+.|.+|++.+.. ..+....+...-. .| ...
T Consensus 305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~--~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF--KPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT--SCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC--CcEEEEEEEeCCeeccccccccccCCCC
Confidence 123567889999998876655 6789999986432 2233333321100 00 012
Q ss_pred EEEEEEcCCCCEEEEEe
Q 018675 217 IWALSFNAKGDKLVSCS 233 (352)
Q Consensus 217 i~~l~~~~~~~~l~s~~ 233 (352)
-..+.++|+|++|.++.
T Consensus 383 Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSSEEEEEC
T ss_pred CCEEEEcCCCCEEEEEc
Confidence 45688999999888775
No 226
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.32 E-value=0.0012 Score=56.89 Aligned_cols=285 Identities=8% Similarity=0.115 Sum_probs=143.6
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCI 100 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i 100 (352)
...+.+|.|.+.+ ..++ ++.++.| +.. ..+.+.|+............+.++.|++ ++.++ ++.++.+..
T Consensus 35 ~~~~~~v~~~~~~------~~~~-~G~~g~i-~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~ 103 (327)
T 2xbg_A 35 TATILDMSFIDRH------HGWL-VGVNATL-MET-RDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH 103 (327)
T ss_dssp SSCEEEEEESSSS------CEEE-EETTTEE-EEE-SSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE
T ss_pred CCcEEEEEECCCC------cEEE-EcCCCeE-EEe-CCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE
Confidence 4478899887542 3555 5667765 233 3333334432211111234678888986 44444 455665544
Q ss_pred EEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEE
Q 018675 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 180 (352)
-.+....+..+.....+.+.+..+.+.+++..++.+ .++.|.. ....+.....+. ......+..+.+.|++.+++.
T Consensus 104 S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~ 179 (327)
T 2xbg_A 104 TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALV--QEAIGVMRNLNRSPSGEYVAV 179 (327)
T ss_dssp ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEE--CSCCCCEEEEEECTTSCEEEE
T ss_pred ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEee--cCCCcceEEEEEcCCCcEEEE
Confidence 332223333222211234557778776666655544 4564422 112244444332 234456788899998877655
Q ss_pred EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceee
Q 018675 181 CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHL 260 (352)
Q Consensus 181 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 260 (352)
+ .++.+..-+ +.....|..... .....+..+.+.+++..++ .+.+|.+.+.+.+. ...|...
T Consensus 180 g-~~G~~~~S~--d~gG~tW~~~~~------~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~--------G~tW~~~ 241 (327)
T 2xbg_A 180 S-SRGSFYSTW--EPGQTAWEPHNR------TTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDN--------SENWGEL 241 (327)
T ss_dssp E-TTSSEEEEE--CTTCSSCEEEEC------CSSSCEEEEEECTTSCEEE-EETTTEEEEEETTE--------EEEECCC
T ss_pred E-CCCcEEEEe--CCCCCceeECCC------CCCCccceeEECCCCCEEE-EeCCceEEEecCCC--------CCeeEec
Confidence 5 445443321 111234544321 2345688899999987664 45678777663210 1122211
Q ss_pred EEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCC
Q 018675 261 CTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDD 340 (352)
Q Consensus 261 ~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~D 340 (352)
..-.......+..+.+.+++.+.+++.++.+.. .... +.....+ .....+...++++.|.++++ + +.++.+
T Consensus 242 ~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~-S~Dg-----G~tW~~~-~~~~~~~~~~~~v~~~~~~~-~-~~~G~~ 312 (327)
T 2xbg_A 242 LSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLC-SQDG-----GQTWQQD-VDVKKVPSNFYKILFFSPDQ-G-FILGQK 312 (327)
T ss_dssp BCTTSSCCSCEEEEEESSSSCEEEEESTTCEEE-ESST-----TSSCEEC-GGGTTSSSCCCEEEEEETTE-E-EEECST
T ss_pred cCCcccCCcceEEEEecCCCEEEEEeCCCeEEE-eCCC-----CcccEEc-CccCCCCCCeEEEEEECCCc-e-EEEcCC
Confidence 100000122466777776665555555676633 2211 1122211 11112335678899976553 4 467789
Q ss_pred CeEEEEe
Q 018675 341 GMIKIWE 347 (352)
Q Consensus 341 g~i~iw~ 347 (352)
|.|.-++
T Consensus 313 G~i~~~~ 319 (327)
T 2xbg_A 313 GILLRYV 319 (327)
T ss_dssp TEEEEEC
T ss_pred ceEEEEc
Confidence 9876654
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.30 E-value=0.00038 Score=66.60 Aligned_cols=150 Identities=12% Similarity=0.062 Sum_probs=86.6
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC---CCCEEEEEe-----CCCcEEEEEccCCceeee
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP---SGKLLATAS-----FDATTCIWEDVGGDYECV 111 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~~-----~d~~i~i~~~~~~~~~~~ 111 (352)
..++.++.|+.|..+|..+++..|+....... .....+..+| ++..++..+ .++.+..||..+++..=.
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~---~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADH---KRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSCT---TSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCCC---CCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 56788889999999999999888875432000 0001111122 454444322 368899999887753211
Q ss_pred Eeecc-----------------------------ccCCeeEEEECCCCcEEEEeeCCCc-------------------EE
Q 018675 112 ATLEG-----------------------------HENEVKSVSWNASGTLLATCGRDKS-------------------VW 143 (352)
Q Consensus 112 ~~~~~-----------------------------h~~~v~~v~~~~~~~~l~s~~~d~~-------------------v~ 143 (352)
..... .......+++.|+..+++.+..++. |.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 11100 0011125678888888888877763 89
Q ss_pred EEecCCCCeeEEEEEeec--Cc-------cCeeEEEEcCCCC---EEEEEeCCCcEEEEecCCC
Q 018675 144 IWEVMPGNEFECVSVLQG--HA-------QDVKMVQWHPTMD---VLFSCSYDNTIKVWWAEDT 195 (352)
Q Consensus 144 vwd~~~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~~~d~~i~iw~~~~~ 195 (352)
.+|...++. +..++. |. ..........++. .++.++.+|.+.++|....
T Consensus 279 AlD~~TG~~---~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 339 (689)
T 1yiq_A 279 AVNADTGEY---VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG 339 (689)
T ss_dssp EEETTTCCE---EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred EEEccCCce---eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC
Confidence 999887753 233322 21 1122222223443 6788889999999986543
No 228
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.26 E-value=0.00017 Score=64.50 Aligned_cols=201 Identities=12% Similarity=0.096 Sum_probs=107.1
Q ss_pred EEEEccCCCCCCCccEEEEee----------CCCeEEEEecCCCceeeeeeee-eecc-eecceEEEEECCCCCEEEEEe
Q 018675 26 SLAWKPTAGVDGVAPVFASCS----------GDKTVRIWEQSASSRFWNCKAV-LEEM-HTRTVRSCAWSPSGKLLATAS 93 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s----------~D~~v~~w~~~~~~~~~~~~~~-~~~~-h~~~v~~~~~s~~~~~l~s~~ 93 (352)
.+.++|+. +.++.+. .++.|.++|..+.+.......- -+.. .......++|+|||+++.++.
T Consensus 122 gia~SpDg------k~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n 195 (426)
T 3c75_H 122 HPVAAEDG------SFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQ 195 (426)
T ss_dssp EEEECTTS------SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEE
T ss_pred ceEECCCC------CEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEe
Confidence 78899973 4455443 4779999999876543222110 0000 011234578999999998887
Q ss_pred C--CCcEEEEEccCCceeeeEeecccc-------CCeeEEEECCCCcEEEE-----------------------------
Q 018675 94 F--DATTCIWEDVGGDYECVATLEGHE-------NEVKSVSWNASGTLLAT----------------------------- 135 (352)
Q Consensus 94 ~--d~~i~i~~~~~~~~~~~~~~~~h~-------~~v~~v~~~~~~~~l~s----------------------------- 135 (352)
. ++.+.+.|..+.+. +..+.--. +.-.-+.++++|++++.
T Consensus 196 ~~~~~~VsVID~~t~kv--v~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~ 273 (426)
T 3c75_H 196 FSPAPAVGVVDLEGKTF--DRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFS 273 (426)
T ss_dssp CSSSCEEEEEETTTTEE--EEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEEC
T ss_pred cCCCCeEEEEECCCCeE--EEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeec
Confidence 4 57899998776543 22222100 00011223334433322
Q ss_pred --------eeCCCcEEEEecCCCCeeEEEEEee---c-------CccCeeEEEEcCCCCEEEEEeC----------CCcE
Q 018675 136 --------CGRDKSVWIWEVMPGNEFECVSVLQ---G-------HAQDVKMVQWHPTMDVLFSCSY----------DNTI 187 (352)
Q Consensus 136 --------~~~d~~v~vwd~~~~~~~~~~~~~~---~-------h~~~v~~~~~~~~~~~l~s~~~----------d~~i 187 (352)
.+..+++.+.|+.... ...+..+. . .......+.++|++..++++.. ++.|
T Consensus 274 ~dg~~~~~~s~~g~V~ViD~~~~~-~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~V 352 (426)
T 3c75_H 274 LRSGRLVWPTYTGKIFQADLTAEG-ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFV 352 (426)
T ss_dssp TTTCEEEEEBTTSEEEEEEECSSC-EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEeccCCc-eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEE
Confidence 2223333333332111 00000000 0 0011122678888877666532 3468
Q ss_pred EEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEe-CCCcEEEEcCCc
Q 018675 188 KVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCS-DDLTIKIWGADI 245 (352)
Q Consensus 188 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~-~dg~i~iwd~~~ 245 (352)
.+.|.... +.+.++.. ....+.+.|+|+++ ++++.. .++.|.++|+..
T Consensus 353 sVID~~T~-----kvv~~I~v-----g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 353 VVLNAETG-----ERINKIEL-----GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEETTTC-----CEEEEEEE-----EEEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred EEEECCCC-----eEEEEEEC-----CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 88875432 33444421 23477899999998 777777 599999999753
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.17 E-value=0.0014 Score=62.67 Aligned_cols=153 Identities=8% Similarity=0.008 Sum_probs=86.1
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC------CCcEEEEEccCCceeeeE
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF------DATTCIWEDVGGDYECVA 112 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------d~~i~i~~~~~~~~~~~~ 112 (352)
+..++.++.|+.|..+|..+++..|+............+.+.-.-.++ .++.++. ++.+..+|..+++..=..
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 356788889999999999999888875421000000111110000134 4444432 688999998877532111
Q ss_pred eecccc------------------------------CCeeEEEECCCCcEEEEeeCCC-------------------cEE
Q 018675 113 TLEGHE------------------------------NEVKSVSWNASGTLLATCGRDK-------------------SVW 143 (352)
Q Consensus 113 ~~~~h~------------------------------~~v~~v~~~~~~~~l~s~~~d~-------------------~v~ 143 (352)
...... .....+++.|++.+++.+..++ +|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 111100 1113567788888888776654 488
Q ss_pred EEecCCCCeeEEEEEeec--Cc-------cCeeEEEEcCCC---CEEEEEeCCCcEEEEecCCC
Q 018675 144 IWEVMPGNEFECVSVLQG--HA-------QDVKMVQWHPTM---DVLFSCSYDNTIKVWWAEDT 195 (352)
Q Consensus 144 vwd~~~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~---~~l~s~~~d~~i~iw~~~~~ 195 (352)
.+|...++. +..++. |. .....+....++ ..++.++.+|.+.++|....
T Consensus 287 AlD~~TG~~---~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG 347 (677)
T 1kb0_A 287 ALDPDTGKY---KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG 347 (677)
T ss_dssp EECTTTCCE---EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred EEECCCCCE---EEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC
Confidence 889876653 222221 21 112223333456 57888899999999976543
No 230
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.16 E-value=0.00046 Score=59.25 Aligned_cols=217 Identities=12% Similarity=0.012 Sum_probs=120.1
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccC
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQD 165 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~ 165 (352)
+..+..++.++.+..++.. +.. ..........+.++...+++.+ ..++.++.+..+|.. +.. ..........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~~~~g~l-~vgt~~~~l~~~d~~-g~~---~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTE--KWRFKTKKAIYATPIVSEDGTI-YVGSNDNYLYAINPD-GTE---KWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCE--EEEEECSSCCCSCCEECTTSCE-EEECTTSEEEEECTT-SCE---EEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCE--EEEEcCCCceeeeeEEcCCCEE-EEEcCCCEEEEECCC-CCE---eEEEecCCCc
Confidence 4556677888889988866 432 2223333445666777777764 446677889999976 432 2223333344
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 166 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
+.++...+++.+. .++ +.+..++ .... ...... .....+.++...++|...+ ++.++.+..++.+.
T Consensus 179 ~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~-----~~~~~~----~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 179 TSAASIGKDGTIY-FGS--DKVYAIN-PDGT-----EKWNFY----AGYWTVTRPAISEDGTIYV-TSLDGHLYAINPDG 244 (330)
T ss_dssp CSCCEECTTCCEE-EES--SSEEEEC-TTSC-----EEEEEC----CSSCCCSCCEECTTSCEEE-EETTTEEEEECTTS
T ss_pred eeeeEEcCCCEEE-EEe--CEEEEEC-CCCc-----EEEEEc----cCCcceeceEECCCCeEEE-EcCCCeEEEECCCC
Confidence 5566666666644 444 7788886 2211 111111 1224466777888876544 55677777776421
Q ss_pred cccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEE
Q 018675 246 TRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 325 (352)
.. .|. +.. ....+..+...+++.+..++.++.+..++.... . +.........+.++.
T Consensus 245 ~~--------~~~----~~~-~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~-~---------~~~~~~~~~~~~~~~ 301 (330)
T 3hxj_A 245 TE--------KWR----FKT-GKRIESSPVIGNTDTIYFGSYDGHLYAINPDGT-E---------KWNFETGSWIIATPV 301 (330)
T ss_dssp CE--------EEE----EEC-SSCCCSCCEECTTSCEEEECTTCEEEEECTTSC-E---------EEEEECSSCCCSCCE
T ss_pred CE--------eEE----eeC-CCCccccceEcCCCeEEEecCCCCEEEECCCCc-E---------EEEEEcCCccccceE
Confidence 11 111 110 111112233455677777888878877753211 1 111111234567777
Q ss_pred ecCCCcceEEEecCCCeEEEEeec
Q 018675 326 WSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 326 ~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
..+++. ++ .++.+|.+++....
T Consensus 302 ~d~~g~-l~-~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 302 IDENGT-IY-FGTRNGKFYALFNL 323 (330)
T ss_dssp ECTTCC-EE-EECTTSCEEEEEC-
T ss_pred EcCCCE-EE-EEcCCCeEEEEecc
Confidence 777775 44 48889999887654
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.15 E-value=0.0013 Score=60.66 Aligned_cols=241 Identities=9% Similarity=-0.017 Sum_probs=129.8
Q ss_pred CCCEEEEEeC-CCcEEEEEccCCceeeeEeeccccCCeeEEEE-C-CCCcEEEEee------------------CCCcEE
Q 018675 85 SGKLLATASF-DATTCIWEDVGGDYECVATLEGHENEVKSVSW-N-ASGTLLATCG------------------RDKSVW 143 (352)
Q Consensus 85 ~~~~l~s~~~-d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~-~-~~~~~l~s~~------------------~d~~v~ 143 (352)
||+++..... ++.|.+.|..+.+...+..+. ....+..+++ . |++.+++.++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip-~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC-CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 7887766655 456888888766433333443 2345788888 5 8999888774 345788
Q ss_pred EEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC---------------cEEEE------------------
Q 018675 144 IWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN---------------TIKVW------------------ 190 (352)
Q Consensus 144 vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---------------~i~iw------------------ 190 (352)
+.|....+ ....+.--. +-..++.+|++.++++.+.+. .+.+.
T Consensus 179 vID~~t~~---v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKWE---VAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTTE---EEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCCe---EEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 88876432 222222111 234567899999998888654 13333
Q ss_pred -----ecCCCCCCCcee-EeeeeccCCCCcccEEEEEEcCCCCEEEEEe-CCCcEEEEcCCccccccCCCCccceeeEEe
Q 018675 191 -----WAEDTDSDNWHC-VQTISESNNGHSSTIWALSFNAKGDKLVSCS-DDLTIKIWGADITRMQSGDGYASWRHLCTI 263 (352)
Q Consensus 191 -----~~~~~~~~~~~~-~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 263 (352)
|..... ... ...+... ....++.++|||++++.++ .+++|.++|+...+......+..-.... .
T Consensus 255 ~V~VID~~~~~---~~~~~~~Ipvg-----~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~-~ 325 (595)
T 1fwx_A 255 GVKVVDGRKEA---SSLFTRYIPIA-----NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV-A 325 (595)
T ss_dssp TEEEEECSGGG---CCSSEEEEEEE-----SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE-E
T ss_pred cEEEEeCcccC---CceeEEEEecC-----CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE-E
Confidence 222100 000 1112111 1233588999999876554 6889999998643210000000000000 0
Q ss_pred ecccCcceEEEEecCCce-EEecCCCCeEEEEEccCCc-cccCcccceeeeccc-----ccCcceeEEEecCCCcceEEE
Q 018675 264 SGYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDD-LIDGPSYKMLLKKEK-----AHDMDVNSVQWSPGERRLLAS 336 (352)
Q Consensus 264 ~~~~~~~i~~~~~~~~~~-~~s~~~d~~v~~~~~~~~~-~~~~~~~~~~~~~~~-----~h~~~i~~~~~sp~~~~~l~s 336 (352)
...-......+.|++++. +.+..-++.+..|+..... .+.+.....++.+.. +|...-..++++|||++++++
T Consensus 326 ~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 326 EPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp CCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred EcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 111234577788898884 4467778899999764310 000111112233332 332222344678999887765
Q ss_pred ecC
Q 018675 337 ASD 339 (352)
Q Consensus 337 ~~~ 339 (352)
..-
T Consensus 406 Nk~ 408 (595)
T 1fwx_A 406 SKF 408 (595)
T ss_dssp ESC
T ss_pred CCC
Confidence 543
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.12 E-value=0.0019 Score=53.71 Aligned_cols=203 Identities=10% Similarity=0.095 Sum_probs=111.8
Q ss_pred eeEEEECCCCcEEEEeeC--CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE-EEeCCCcEEEEecCCCCC
Q 018675 121 VKSVSWNASGTLLATCGR--DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWAEDTDS 197 (352)
Q Consensus 121 v~~v~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~iw~~~~~~~ 197 (352)
...+.|++++.++++.+. +++|.+.|+..++....+. +..+. ....+++. +..|+ +...++.+.++|...
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~~~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t--- 95 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-MDDSY-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRT--- 95 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CCTTC-CEEEEEEE--TTEEEEEETTCSEEEEEETTT---
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cCCCc-ceEEEEEe--CCEEEEEEecCCEEEEEECCC---
Confidence 578999998766665553 5799999998765433222 22221 22234444 44444 445678899997543
Q ss_pred CCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecc-c---CcceEE
Q 018675 198 DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY-H---DRTIFS 273 (352)
Q Consensus 198 ~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~i~~ 273 (352)
.+.+.++... .++. +. ++++|..+..+..+++|.++|....+. ...+... . -..+..
T Consensus 96 --~~v~~~i~~g-~~~g---~g--lt~Dg~~l~vs~gs~~l~viD~~t~~v-----------~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 96 --LSNIKNFTHQ-MKDG---WG--LATDGKILYGSDGTSILYEIDPHTFKL-----------IKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp --TEEEEEEECC-SSSC---CE--EEECSSSEEEECSSSEEEEECTTTCCE-----------EEEEECEETTEECCCEEE
T ss_pred --CcEEEEEECC-CCCe---EE--EEECCCEEEEECCCCeEEEEECCCCcE-----------EEEEEECCCCccccccee
Confidence 2344444321 1221 23 445666666555688999998754221 1111110 0 112445
Q ss_pred EEecCCceEEecCCCCeEEEEEccCCccccCcccceeeec--cccc--CcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 274 VHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK--EKAH--DMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 274 ~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~--~~~h--~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+.+..+..++.....+.|.+.+.....+........+... ...+ ..-.+.++|+|+++++++|+.....|.+-++.
T Consensus 157 le~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 157 LEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 5555333445555567788876654332211100000000 0001 13568999999998899999999998887764
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.07 E-value=0.0042 Score=53.30 Aligned_cols=208 Identities=13% Similarity=0.090 Sum_probs=116.1
Q ss_pred ecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCce-eeeeeeee------------e-cceecceEEEEE
Q 018675 17 LEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSR-FWNCKAVL------------E-EMHTRTVRSCAW 82 (352)
Q Consensus 17 ~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~-~~~~~~~~------------~-~~h~~~v~~~~~ 82 (352)
+.|....-.+++|.|+ +.++.++..++.|..|+..+... .+...... . .........+++
T Consensus 14 ~~g~~~~p~~i~~d~~------g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~ 87 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDST------NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISY 87 (322)
T ss_dssp EECSSSCCCCEECCTT------CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE
T ss_pred cCCccCCceEEEEcCC------CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEE
Confidence 3343334456778775 35577777889999998765321 11100000 0 001134688999
Q ss_pred CC-CCCEEEEEeCCCcEEEEEccCCceeeeEe-ecc-ccCCeeEEEECC-CCcEEEEeeC-----------------CCc
Q 018675 83 SP-SGKLLATASFDATTCIWEDVGGDYECVAT-LEG-HENEVKSVSWNA-SGTLLATCGR-----------------DKS 141 (352)
Q Consensus 83 s~-~~~~l~s~~~d~~i~i~~~~~~~~~~~~~-~~~-h~~~v~~v~~~~-~~~~l~s~~~-----------------d~~ 141 (352)
.+ +|++++ +...+.+..++..++....+.. ..+ .....+.+++.+ +|.+.++-.. ++.
T Consensus 88 ~~~~g~l~v-~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 88 NLQNNQLYI-VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp ETTTTEEEE-EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred cCCCCcEEE-EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCce
Confidence 98 666554 4444557777654433222211 111 113467899999 8987776432 356
Q ss_pred EEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEE
Q 018675 142 VWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWAL 220 (352)
Q Consensus 142 v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l 220 (352)
|..+|...+. ..... ........++++|++..|+.+ ...+.|..|+............. . .. . ...+
T Consensus 167 v~~~d~~~~~-~~~~~---~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~---~-~~---g-P~gi 234 (322)
T 2fp8_A 167 LIKYDPSTKE-TTLLL---KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV---K-IP---N-PGNI 234 (322)
T ss_dssp EEEEETTTTE-EEEEE---EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE---E-CS---S-EEEE
T ss_pred EEEEeCCCCE-EEEec---cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE---e-CC---C-CCCe
Confidence 7777754332 21111 111234578999998865554 55688999887643222221111 1 11 2 5678
Q ss_pred EEcCCCCEEEEEeC----------CCcEEEEcC
Q 018675 221 SFNAKGDKLVSCSD----------DLTIKIWGA 243 (352)
Q Consensus 221 ~~~~~~~~l~s~~~----------dg~i~iwd~ 243 (352)
+++++|.++++... .+.|..+|.
T Consensus 235 ~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 235 KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE 267 (322)
T ss_dssp EECTTSCEEEEEEEETTSSTTSCEEEEEEEECT
T ss_pred EECCCCCEEEEecCcccccccCCCccEEEEECC
Confidence 99999998877654 456777764
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.04 E-value=0.0034 Score=53.89 Aligned_cols=242 Identities=12% Similarity=0.021 Sum_probs=126.0
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec-----------------cccCCeeEEEECC-CCcEEEEeeC
Q 018675 77 VRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE-----------------GHENEVKSVSWNA-SGTLLATCGR 138 (352)
Q Consensus 77 v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~-----------------~h~~~v~~v~~~~-~~~~l~s~~~ 138 (352)
...++++++|+++.++..++.|..|+..++......... .....+..+++.+ +++++++ ..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~-d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV-DC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE-ET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE-EC
Confidence 456788999987778888899998876654433221100 0113578899997 6665554 33
Q ss_pred CCcEEEEecCCCCeeEEEEEe-ec-CccCeeEEEEcC-CCCEEEEEeC-----------------CCcEEEEecCCCCCC
Q 018675 139 DKSVWIWEVMPGNEFECVSVL-QG-HAQDVKMVQWHP-TMDVLFSCSY-----------------DNTIKVWWAEDTDSD 198 (352)
Q Consensus 139 d~~v~vwd~~~~~~~~~~~~~-~~-h~~~v~~~~~~~-~~~~l~s~~~-----------------d~~i~iw~~~~~~~~ 198 (352)
.+.+..+|...+ ....+... .+ .......+.+.| ++.+.++-.. ++.|..++.....
T Consensus 100 ~~~i~~~d~~~g-~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-- 176 (322)
T 2fp8_A 100 YYHLSVVGSEGG-HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE-- 176 (322)
T ss_dssp TTEEEEECTTCE-ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE--
T ss_pred CCCEEEEeCCCC-EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE--
Confidence 444777775422 11222111 11 112356788899 8876665432 2456666542211
Q ss_pred CceeEeeeeccCCCCcccEEEEEEcCCCCEE-EEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEec
Q 018675 199 NWHCVQTISESNNGHSSTIWALSFNAKGDKL-VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWS 277 (352)
Q Consensus 199 ~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 277 (352)
. ..+... ....+.|+++|+++.| ++-...+.|.+|+++.... ...+.... ... ...+..+
T Consensus 177 -~---~~~~~~----~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~------~~~~~~~~----~~g-P~gi~~d 237 (322)
T 2fp8_A 177 -T---TLLLKE----LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK------GTAEVLVK----IPN-PGNIKRN 237 (322)
T ss_dssp -E---EEEEEE----ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT------TCEEEEEE----CSS-EEEEEEC
T ss_pred -E---EEeccC----CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC------CccceEEe----CCC-CCCeEEC
Confidence 1 111100 1234568999999855 4545668899998652110 01111111 112 5566777
Q ss_pred CCce-EEecCC----------CCeEEEEEccCCccccCcccceeeeccccc-CcceeEEEecCCCcceEEEecCCCeEEE
Q 018675 278 REGI-IASGAA----------DDSVQFFVESKDDLIDGPSYKMLLKKEKAH-DMDVNSVQWSPGERRLLASASDDGMIKI 345 (352)
Q Consensus 278 ~~~~-~~s~~~----------d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~sp~~~~~l~s~~~Dg~i~i 345 (352)
+++. +++... .+.+..++.... . .. .+....+. -..++.+++. ++ +++++....+.|.+
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~-~-----~~-~~~~~~g~~~~~~~~~~~~-~g-~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGN-I-----LE-VIPLPPPFAGEHFEQIQEH-DG-LLYIGTLFHGSVGI 308 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSC-E-----EE-EEECCTTTTTSCCCEEEEE-TT-EEEEECSSCSEEEE
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCC-E-----EE-EEECCCCCccccceEEEEe-CC-EEEEeecCCCceEE
Confidence 7663 333322 234555543211 0 01 11111111 2346677773 45 57888878889999
Q ss_pred Eeecc
Q 018675 346 WELAN 350 (352)
Q Consensus 346 w~~~~ 350 (352)
+++..
T Consensus 309 ~~~~~ 313 (322)
T 2fp8_A 309 LVYDK 313 (322)
T ss_dssp EEC--
T ss_pred Eeccc
Confidence 98764
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.00 E-value=0.0034 Score=52.14 Aligned_cols=211 Identities=9% Similarity=0.007 Sum_probs=119.1
Q ss_pred eeeeeeecCCcc--ceEEEEEccCCCCCCCccEEEEeeC--CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC
Q 018675 11 LREIQTLEGHTD--RVWSLAWKPTAGVDGVAPVFASCSG--DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG 86 (352)
Q Consensus 11 ~~~~~~~~gH~~--~V~~i~~~p~~~~~~~~~~l~s~s~--D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 86 (352)
.+.+.++ .|.. ...++.|+|+ +.++++.+. +++|++.|..+++...... +.. + .....+++. +
T Consensus 9 ~~vv~~~-p~~~~~f~~Gl~~~~d------g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~--l~~-~-~fgeGi~~~--g 75 (266)
T 2iwa_A 9 VEVLNEF-PHDPYAFTQGLVYAEN------DTLFESTGLYGRSSVRQVALQTGKVENIHK--MDD-S-YFGEGLTLL--N 75 (266)
T ss_dssp EEEEEEE-ECCTTCCEEEEEECST------TEEEEEECSTTTCEEEEEETTTCCEEEEEE--CCT-T-CCEEEEEEE--T
T ss_pred ceEEEEE-ECCCCCCcccEEEeCC------CeEEEECCCCCCCEEEEEECCCCCEEEEEe--cCC-C-cceEEEEEe--C
Confidence 3455565 3554 3579999985 245555553 6899999998876432211 111 1 111233333 4
Q ss_pred CEE-EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec--Cc
Q 018675 87 KLL-ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG--HA 163 (352)
Q Consensus 87 ~~l-~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--h~ 163 (352)
+.| ++.-.++.+.++|..+.+ .+..+..-...-+. +++++..++.+..+++|.++|....+....+..-.. ..
T Consensus 76 ~~lyv~t~~~~~v~viD~~t~~--v~~~i~~g~~~g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRTLS--NIKNFTHQMKDGWG--LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRV 151 (266)
T ss_dssp TEEEEEETTCSEEEEEETTTTE--EEEEEECCSSSCCE--EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred CEEEEEEecCCEEEEEECCCCc--EEEEEECCCCCeEE--EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccc
Confidence 444 455567899999977653 34444321122233 446777666666788999999765543333322111 11
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc---------CCCCcccEEEEEEcCCCC-EEEEEe
Q 018675 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES---------NNGHSSTIWALSFNAKGD-KLVSCS 233 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~---------~~~h~~~i~~l~~~~~~~-~l~s~~ 233 (352)
...+.+.|. ++...+....++.|.+.|.... +....+... ...-....+.|+|+|+++ +++++.
T Consensus 152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~tg-----~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 152 IRLNELEYI-NGEVWANIWQTDCIARISAKDG-----TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEEETTTC-----CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred ccceeEEEE-CCEEEEecCCCCeEEEEECCCC-----cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 235567777 5644444445788888876543 223333211 000113568999999975 566776
Q ss_pred CCCcEEEEcCC
Q 018675 234 DDLTIKIWGAD 244 (352)
Q Consensus 234 ~dg~i~iwd~~ 244 (352)
..+++...++.
T Consensus 226 ~~~~v~~i~l~ 236 (266)
T 2iwa_A 226 LWPKLFEIKLH 236 (266)
T ss_dssp TCSEEEEEEEE
T ss_pred CCCeEEEEEEe
Confidence 77888877653
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.00 E-value=0.00061 Score=65.22 Aligned_cols=204 Identities=12% Similarity=0.136 Sum_probs=107.8
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeeccee-----cce-EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeE
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT-----RTV-RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVA 112 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~-----~~v-~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~ 112 (352)
+..++.++.++.|.-+|..+++..|+.......... ..+ ..++. .+..++.++.|+.+..+|..+++.. ..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~-W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRA-WS 146 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE-EE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEe-ee
Confidence 346777788999999999999988875432110000 000 01111 3567788889999999998887642 22
Q ss_pred eecc-ccCCeeEEEECC---CCcEEEEee-----CCCcEEEEecCCCCeeEEEEEeecC---------------------
Q 018675 113 TLEG-HENEVKSVSWNA---SGTLLATCG-----RDKSVWIWEVMPGNEFECVSVLQGH--------------------- 162 (352)
Q Consensus 113 ~~~~-h~~~v~~v~~~~---~~~~l~s~~-----~d~~v~vwd~~~~~~~~~~~~~~~h--------------------- 162 (352)
.-.. +......+..+| ++..++..+ .++.|..||...++..-......+.
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred ecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 1111 111111111122 444444332 3689999998877642221111000
Q ss_pred -------ccCeeEEEEcCCCCEEEEEeCCCc-------------------EEEEecCCCCCCCceeEeeeecc--CCCCc
Q 018675 163 -------AQDVKMVQWHPTMDVLFSCSYDNT-------------------IKVWWAEDTDSDNWHCVQTISES--NNGHS 214 (352)
Q Consensus 163 -------~~~v~~~~~~~~~~~l~s~~~d~~-------------------i~iw~~~~~~~~~~~~~~~~~~~--~~~h~ 214 (352)
...-..+.+.|+...++.++.++. |..+|..... ..|.. +..... .....
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~-~~W~~-~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGE-YVWHY-QTTPGDAWDYTAT 304 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCC-EEEEE-ESSTTCCSCCCCC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCc-eeEee-ecCCcccccccCC
Confidence 001124678888888888877653 7777765432 11211 100000 00011
Q ss_pred ccEEEEEEcCCCC---EEEEEeCCCcEEEEcCCccc
Q 018675 215 STIWALSFNAKGD---KLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 215 ~~i~~l~~~~~~~---~l~s~~~dg~i~iwd~~~~~ 247 (352)
.++.......+|+ .++.++.+|.+.++|.+..+
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 2222223333554 78889999999999976443
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.98 E-value=0.0032 Score=51.89 Aligned_cols=195 Identities=13% Similarity=0.194 Sum_probs=100.7
Q ss_pred cccCC--eeEEEECCCCcEEEEeeCCC--cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE-EEeCCCcEEEE
Q 018675 116 GHENE--VKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVW 190 (352)
Q Consensus 116 ~h~~~--v~~v~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~iw 190 (352)
.|... ...+.|+ ++.++.+.+.++ +|+++|+..++....+. +. .........+.+..|. ....++.+.+|
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~---~~~FgeGit~~g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LG---KRYFGEGISDWKDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CC---TTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cC---CccceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 35443 3678888 677777877766 89999998776443322 21 1222222223344444 44558889999
Q ss_pred ecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecc-cC-
Q 018675 191 WAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY-HD- 268 (352)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~- 268 (352)
|... .+.+.++... +.+ +.++ +++..|+.+..+++|.++|....+.. ..+... ..
T Consensus 113 D~~t-----~~~~~ti~~~--~eG---~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~-----------~~I~V~~~g~ 169 (262)
T 3nol_A 113 NIRN-----LRQVRSFNYD--GEG---WGLT--HNDQYLIMSDGTPVLRFLDPESLTPV-----------RTITVTAHGE 169 (262)
T ss_dssp ETTT-----CCEEEEEECS--SCC---CCEE--ECSSCEEECCSSSEEEEECTTTCSEE-----------EEEECEETTE
T ss_pred ECcc-----CcEEEEEECC--CCc---eEEe--cCCCEEEEECCCCeEEEEcCCCCeEE-----------EEEEeccCCc
Confidence 7543 2334444321 111 2344 45665665555788999987532221 111110 01
Q ss_pred --cceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeec---ccccCcceeEEEecCCCcceEEEec
Q 018675 269 --RTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK---EKAHDMDVNSVQWSPGERRLLASAS 338 (352)
Q Consensus 269 --~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~---~~~h~~~i~~~~~sp~~~~~l~s~~ 338 (352)
..+..+.+..+..++..-.++.|.+.+.....+........+... ...-..-.+.|||+|+++++++||-
T Consensus 170 ~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 170 ELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 112334555333444444566677765544332211111101000 0111235789999999888888774
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.92 E-value=5.2e-06 Score=73.33 Aligned_cols=141 Identities=15% Similarity=0.106 Sum_probs=70.9
Q ss_pred CCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc
Q 018675 85 SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ 164 (352)
Q Consensus 85 ~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~ 164 (352)
++..+++++.|+.+..||..+++. +-.... +.+.+..+..++..+++++.|+.|..||...++.. ..+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~--~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~---w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI--KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL---TKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE--EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCS---EECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE--EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee---eeeeccCc
Confidence 577888999999999999887753 223333 44555545567777888889999999998655432 12221211
Q ss_pred C-eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 165 D-VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 165 ~-v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
. +.+......+..+++++.++.+..||...... .| ... .+. ...++|++..+++++.|+.|+.||.
T Consensus 81 ~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~-~w----~~~----~~~----~~~~~p~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 81 ELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEK-QQ----TLS----SAF----ADSLSPSTSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp HHHTTCSCC-----CCCCEEEEEEEEECCC-----------------------------------EEEEEEEEEEECCCS
T ss_pred cccccCceEecCCEEEEEeCCCEEEEEECCCCcE-EE----Eec----CCC----cccccccCCEEEEEecCCEEEEEEC
Confidence 1 10000001344677888899999997654321 11 111 111 1345678888999999999999987
Q ss_pred Cc
Q 018675 244 DI 245 (352)
Q Consensus 244 ~~ 245 (352)
+.
T Consensus 148 ~t 149 (369)
T 2hz6_A 148 KT 149 (369)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.92 E-value=0.0065 Score=50.44 Aligned_cols=228 Identities=10% Similarity=0.054 Sum_probs=123.6
Q ss_pred EEEEeeCCCeEEEEecCCCceee-eeeeeeecceecceEEEEECCCCCE-EEEEeCCCcEEEEEccCCceeeeEeecccc
Q 018675 41 VFASCSGDKTVRIWEQSASSRFW-NCKAVLEEMHTRTVRSCAWSPSGKL-LATASFDATTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
+|+-+.. +.|+.+++....... .....+ ......+..++|+++++. .++-..++.|..++..+.... .......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~-~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~ 78 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFL-HIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQDL 78 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEE-EEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTTC
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeee-cCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE--EEEECCC
Confidence 3444333 477778776542100 000011 111245678999996654 455556788999887654322 1222222
Q ss_pred CCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC---CCcEEEEecCC
Q 018675 119 NEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY---DNTIKVWWAED 194 (352)
Q Consensus 119 ~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~i~iw~~~~ 194 (352)
.....+++.+++. ++++-...+.|.++++.... ...+ ..........++++|++..|+.+.. .+.|..++...
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 4678999998654 55555567789998875322 1211 1112235678899997665555543 35677776533
Q ss_pred CCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE-EEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEE
Q 018675 195 TDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL-VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFS 273 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 273 (352)
.. . ..+.. ........++++|++..| ++-...+.|.+++.+.... ...... ......
T Consensus 156 ~~---~---~~~~~---~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-----------~~~~~~--~~~P~g 213 (267)
T 1npe_A 156 TN---R---RILAQ---DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-----------RKVLEG--LQYPFA 213 (267)
T ss_dssp CC---C---EEEEC---TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-----------EEEEEC--CCSEEE
T ss_pred CC---c---EEEEE---CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-----------EEEecC--CCCceE
Confidence 21 1 11111 112357789999986654 5555678899998753211 001111 123445
Q ss_pred EEecCCceEEecCCCCeEEEEEcc
Q 018675 274 VHWSREGIIASGAADDSVQFFVES 297 (352)
Q Consensus 274 ~~~~~~~~~~s~~~d~~v~~~~~~ 297 (352)
++...+..+++....+.|..++..
T Consensus 214 i~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 214 VTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCEEEEEECCCCeEEEEeCC
Confidence 555544455555566777777543
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.87 E-value=0.0032 Score=51.93 Aligned_cols=190 Identities=12% Similarity=0.097 Sum_probs=103.5
Q ss_pred eeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q 018675 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW 200 (352)
Q Consensus 121 v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 200 (352)
...+.|+. +.++++.+.++.|+++|+..++....+ +.... ..-.++... +...+....++.+.+||... .
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~-FgeGit~~g-~~Ly~ltw~~~~v~V~D~~T-----l 126 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME--RLGNI-FAEGLASDG-ERLYQLTWTEGLLFTWSGMP-----P 126 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE--ECTTC-CEEEEEECS-SCEEEEESSSCEEEEEETTT-----T
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCc-ceeEEEEeC-CEEEEEEccCCEEEEEECCc-----C
Confidence 35777763 577788888889999999877655444 33211 112344432 34445556788999997543 3
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeec----ccCcceEEEEe
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG----YHDRTIFSVHW 276 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~ 276 (352)
+.+.++... +.. +.++ +++..|+.+..+++|.++|....+.. ..+.. ..-..+..+.|
T Consensus 127 ~~~~ti~~~--~eG---wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~-----------~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 127 QRERTTRYS--GEG---WGLC--YWNGKLVRSDGGTMLTFHEPDGFALV-----------GAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp EEEEEEECS--SCC---CCEE--EETTEEEEECSSSEEEEECTTTCCEE-----------EEEECEETTEECCCEEEEEE
T ss_pred cEEEEEeCC--Cce---eEEe--cCCCEEEEECCCCEEEEEcCCCCeEE-----------EEEEeCCCCcccccccccEE
Confidence 445555421 221 3444 45666666666889999986543221 11111 01112344555
Q ss_pred cCCceEEecCCCCeEEEEEccCCccccCcccceeeec----ccccCcceeEEEecCCCcceEEEec
Q 018675 277 SREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK----EKAHDMDVNSVQWSPGERRLLASAS 338 (352)
Q Consensus 277 ~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~----~~~h~~~i~~~~~sp~~~~~l~s~~ 338 (352)
..+..++..-..+.|.+.+.....+........+... ...-..-.+.|||+|+++++++||-
T Consensus 189 ~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 189 ANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred eCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 5444444444566777776544332221111111000 0112245789999998888998874
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.86 E-value=0.0039 Score=53.28 Aligned_cols=213 Identities=12% Similarity=0.059 Sum_probs=121.1
Q ss_pred EEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCC
Q 018675 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENE 120 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~ 120 (352)
.+..++.++.+..++.. ++..+.... ....+.++...+++.+ ..++.++.+..++.. ++. ..........
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~-----~~~~~~~~~~~~~g~l-~vgt~~~~l~~~d~~-g~~--~~~~~~~~~~ 178 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKT-----KKAIYATPIVSEDGTI-YVGSNDNYLYAINPD-GTE--KWRFKTNDAI 178 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEEC-----SSCCCSCCEECTTSCE-EEECTTSEEEEECTT-SCE--EEEEECSSCC
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcC-----CCceeeeeEEcCCCEE-EEEcCCCEEEEECCC-CCE--eEEEecCCCc
Confidence 46667778889889877 554443221 2234555666777774 457778899999876 432 2223333455
Q ss_pred eeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q 018675 121 VKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNW 200 (352)
Q Consensus 121 v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 200 (352)
+.++...+++.++++. +.+..+| ..+.. ..........+.++...+++. +..++.++.+..++... .
T Consensus 179 ~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~---~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g---~-- 245 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS---DKVYAIN-PDGTE---KWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG---T-- 245 (330)
T ss_dssp CSCCEECTTCCEEEES---SSEEEEC-TTSCE---EEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS---C--
T ss_pred eeeeEEcCCCEEEEEe---CEEEEEC-CCCcE---EEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC---C--
Confidence 6777777788766554 7788888 44432 222333334566777777765 56677778888875311 1
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG 280 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 280 (352)
....... ....+.++.+.+++. |..++.+|.|..+|.. .+. .|. .. .....+.++..+.++
T Consensus 246 -~~~~~~~----~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~~-g~~-------~~~--~~---~~~~~~~~~~~d~~g 306 (330)
T 3hxj_A 246 -EKWRFKT----GKRIESSPVIGNTDT-IYFGSYDGHLYAINPD-GTE-------KWN--FE---TGSWIIATPVIDENG 306 (330)
T ss_dssp -EEEEEEC----SSCCCSCCEECTTSC-EEEECTTCEEEEECTT-SCE-------EEE--EE---CSSCCCSCCEECTTC
T ss_pred -EeEEeeC----CCCccccceEcCCCe-EEEecCCCCEEEECCC-CcE-------EEE--EE---cCCccccceEEcCCC
Confidence 1111111 111122344555664 5566778788888742 110 111 11 112334445556677
Q ss_pred eEEecCCCCeEEEEE
Q 018675 281 IIASGAADDSVQFFV 295 (352)
Q Consensus 281 ~~~s~~~d~~v~~~~ 295 (352)
.+..++.+|.+.+..
T Consensus 307 ~l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 307 TIYFGTRNGKFYALF 321 (330)
T ss_dssp CEEEECTTSCEEEEE
T ss_pred EEEEEcCCCeEEEEe
Confidence 788888888887763
No 242
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.85 E-value=0.0019 Score=56.62 Aligned_cols=67 Identities=15% Similarity=0.030 Sum_probs=45.6
Q ss_pred EEEcCCCCEEEEEeC---------CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-EEEEEe-CCCc
Q 018675 169 VQWHPTMDVLFSCSY---------DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-KLVSCS-DDLT 237 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~---------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~~-~dg~ 237 (352)
+.++|++..++.+.. ++.+.++|.... +.+.++.. ......+.|+|+|+ .+++.. .++.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~-----~vv~~i~v-----g~~p~gi~~s~Dg~~l~va~~~~~~~ 338 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG-----QTSGPISN-----GHDSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC-----CEEECCEE-----EEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC-----eEEEEEEC-----CCCcceEEECCCCCEEEEEccCCCCe
Confidence 679999888776543 235668876542 22333321 23577899999997 566777 5999
Q ss_pred EEEEcCCc
Q 018675 238 IKIWGADI 245 (352)
Q Consensus 238 i~iwd~~~ 245 (352)
|.++|+..
T Consensus 339 VsVID~~t 346 (368)
T 1mda_H 339 LDIYDAAS 346 (368)
T ss_dssp EEEEESSS
T ss_pred EEEEECCC
Confidence 99999864
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.84 E-value=0.0017 Score=62.89 Aligned_cols=202 Identities=15% Similarity=0.085 Sum_probs=101.8
Q ss_pred CCcc-ceEEEEEc-cCCCCCCCccEEE-EeeCC----CeEEEEecCCC-ceeeeeeeeeecceecceEEEEECCCCCEEE
Q 018675 19 GHTD-RVWSLAWK-PTAGVDGVAPVFA-SCSGD----KTVRIWEQSAS-SRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA 90 (352)
Q Consensus 19 gH~~-~V~~i~~~-p~~~~~~~~~~l~-s~s~D----~~v~~w~~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 90 (352)
+|.- .+.+..|+ |+ ++.+| +.+.+ .+|.++++.++ ..+ ...+ ......++|+|||+.|+
T Consensus 170 ~~~~~~~~~~~~S~PD------G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l---~~~~----~~~~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPE------HDLVAFSVDMSGNEVYTIEFKRISDPSQTI---ADKV----SGTNGEIVWGPDHTSLF 236 (751)
T ss_dssp TCSCCEEEEEEECTTT------TCEEEEEEESSSSSCEEEEEEETTCTTCCC---CCCE----EEECSCCEECSSTTEEE
T ss_pred CCCeEEEeeeEecCCC------CCEEEEEEeCCCCceEEEEEEECCCCCEeC---Cccc----cCceeeEEEecCCCEEE
Confidence 4543 67889999 87 45555 33333 35999998876 421 1111 11234678999999888
Q ss_pred EEeCCC-----cEEEEEccCCceeeeEeec-cccCCeeEEEECCCCcEEEEeeC---CCcEEEEecCCCC-eeEEEEEee
Q 018675 91 TASFDA-----TTCIWEDVGGDYECVATLE-GHENEVKSVSWNASGTLLATCGR---DKSVWIWEVMPGN-EFECVSVLQ 160 (352)
Q Consensus 91 s~~~d~-----~i~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~---d~~v~vwd~~~~~-~~~~~~~~~ 160 (352)
....|. .|.+++..++......... ........+.|+|+|++|+..+. ...|.++|+..+. .........
T Consensus 237 y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 316 (751)
T 2xe4_A 237 YVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP 316 (751)
T ss_dssp EEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC
T ss_pred EEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec
Confidence 777652 4555555443211112222 22234567889999998775542 3467777875431 110011122
Q ss_pred cCccCeeEEEEcCCCCEEEEEeCC--CcEEE--EecCCCCCCCcee-EeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC
Q 018675 161 GHAQDVKMVQWHPTMDVLFSCSYD--NTIKV--WWAEDTDSDNWHC-VQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235 (352)
Q Consensus 161 ~h~~~v~~~~~~~~~~~l~s~~~d--~~i~i--w~~~~~~~~~~~~-~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d 235 (352)
..........|+..+.+++....+ +..++ +++... ..+.. + +.. .....+..+.+. .+.++++...+
T Consensus 317 ~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~--~~~~~~l--i~~---~~~~~l~~~~~~-~~~lv~~~~~~ 388 (751)
T 2xe4_A 317 REKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP--SDWSHVL--VDH---SEDVFMESIAVR-SNYLVVAGRRA 388 (751)
T ss_dssp CCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST--TCCCCEE--ECC---CSSEEEEEEEEC-SSEEEEEEEET
T ss_pred CCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc--ccceeeE--ECC---CCCcEEEEEEEE-CCEEEEEEEeC
Confidence 222333444444433344444443 33344 443221 12221 1 110 111234555554 23455667778
Q ss_pred CcEEEE
Q 018675 236 LTIKIW 241 (352)
Q Consensus 236 g~i~iw 241 (352)
+..++|
T Consensus 389 g~~~l~ 394 (751)
T 2xe4_A 389 GLTRIW 394 (751)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 866655
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.81 E-value=0.0097 Score=48.99 Aligned_cols=197 Identities=9% Similarity=0.102 Sum_probs=110.0
Q ss_pred eeeeeecCCccc--eEEEEEccCCCCCCCccEEEEeeCCC--eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC
Q 018675 12 REIQTLEGHTDR--VWSLAWKPTAGVDGVAPVFASCSGDK--TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK 87 (352)
Q Consensus 12 ~~~~~~~gH~~~--V~~i~~~p~~~~~~~~~~l~s~s~D~--~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 87 (352)
+.+.++ .|... ..++.|+ + +.++.+++.+| +|+.+|+.+++...+.. + ........+.++++
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~------~~LyestG~~g~S~v~~vD~~Tgkv~~~~~--l----~~~~FgeGit~~g~ 97 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-N------GYFYESTGLNGRSSIRKVDIESGKTLQQIE--L----GKRYFGEGISDWKD 97 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-T------TEEEEEEEETTEEEEEEECTTTCCEEEEEE--C----CTTCCEEEEEEETT
T ss_pred EEEEEe-cCCCCcccceEEEE-C------CEEEEECCCCCCceEEEEECCCCcEEEEEe--c----CCccceeEEEEeCC
Confidence 455556 45543 3678887 3 35778888776 89999998876432221 1 12233333333454
Q ss_pred EEEE-EeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEee-cCc-c
Q 018675 88 LLAT-ASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ-GHA-Q 164 (352)
Q Consensus 88 ~l~s-~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~h~-~ 164 (352)
.|.. ...++.+.+||..+.+. +.++..- ..=+.++ +++..|+.+..++.|.++|....+....+.... +.. .
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~--~~ti~~~-~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQ--VRSFNYD-GEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCE--EEEEECS-SCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECC
T ss_pred EEEEEEeeCCEEEEEECccCcE--EEEEECC-CCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 4444 44578899999876543 4444321 1223444 566666666667889999976555433333221 111 2
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc--------CCCCcccEEEEEEcCCCCEEEEEe
Q 018675 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES--------NNGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~--------~~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
.++.+.|. ++...+....++.|.+.|.... +....+... ...-....+.|+|+|+++.|...|
T Consensus 173 ~lNELe~~-~G~lyan~w~~~~I~vIDp~tG-----~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 173 ELNELEWV-DGEIFANVWQTNKIVRIDPETG-----KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEECTTTC-----BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccceeEEE-CCEEEEEEccCCeEEEEECCCC-----cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 34456665 5655544446778888865432 223333211 011134678999999876665555
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.80 E-value=0.0093 Score=48.60 Aligned_cols=197 Identities=11% Similarity=0.108 Sum_probs=100.2
Q ss_pred cccCC--eeEEEECCCCcEEEEeeCCC--cEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 018675 116 GHENE--VKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191 (352)
Q Consensus 116 ~h~~~--v~~v~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~ 191 (352)
.|+.. +..+.|++ +.++.+.+.++ +|+.+|+..++....+ .+..+. .--.++... +...+....++.+.+||
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~~~-fgeGi~~~~-~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRA-EVPPPY-FGAGIVAWR-DRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCTTC-CEEEEEEET-TEEEEEESSSSEEEEEE
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEE-eCCCCc-ceeEEEEeC-CEEEEEEeeCCEEEEEE
Confidence 45433 55788876 56666766654 8999999877643322 122211 112233332 33444556688999996
Q ss_pred cCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeec----cc
Q 018675 192 AEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISG----YH 267 (352)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~ 267 (352)
... ...+.++... ++ =+.|+ +++..|..+..++.|.++|....+.. ..+.. ..
T Consensus 92 ~~t-----l~~~~ti~~~--~~---Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~-----------~~I~V~~~g~~ 148 (243)
T 3mbr_X 92 LAT-----LTPRARFRYP--GE---GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQV-----------GSIKVTAGGRP 148 (243)
T ss_dssp TTT-----TEEEEEEECS--SC---CCEEE--ECSSCEEEECSSSEEEEECTTTCCEE-----------EEEECEETTEE
T ss_pred CCc-----CcEEEEEeCC--CC---ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEE-----------EEEEEccCCcc
Confidence 543 3445555421 22 13455 45555555555889999987533221 11111 00
Q ss_pred CcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecc----cccCcceeEEEecCCCcceEEEecC
Q 018675 268 DRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKE----KAHDMDVNSVQWSPGERRLLASASD 339 (352)
Q Consensus 268 ~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~i~~~~~sp~~~~~l~s~~~ 339 (352)
-..+..+.+..+..++..-....|.+.+.....+........+.... ..-..-.+.||++|++.++++||-.
T Consensus 149 ~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 149 LDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp CCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred cccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 11233444443334444444556666655433322111111111000 1122457899999988888988753
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.80 E-value=0.01 Score=48.90 Aligned_cols=192 Identities=10% Similarity=0.031 Sum_probs=109.6
Q ss_pred eeeeecCCccc--eEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEE--EEECCCCCE
Q 018675 13 EIQTLEGHTDR--VWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRS--CAWSPSGKL 88 (352)
Q Consensus 13 ~~~~~~gH~~~--V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~--~~~s~~~~~ 88 (352)
.+.++ .|... ..++.|+. +.++.+.+.++.|+.+|+.+++..... + ...... +++.. +++
T Consensus 45 Vv~~~-phd~~~ftqGL~~~~-------~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l----~~~~FgeGit~~g-~~L 108 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFHQ-------GHFFESTGHQGTLRQLSLESAQPVWME---R----LGNIFAEGLASDG-ERL 108 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEET-------TEEEEEETTTTEEEECCSSCSSCSEEE---E----CTTCCEEEEEECS-SCE
T ss_pred EEEEE-cCCCccccceEEEEC-------CEEEEEcCCCCEEEEEECCCCcEEeEE---C----CCCcceeEEEEeC-CEE
Confidence 34455 45443 35788864 367888889999999999887643222 1 112222 34432 344
Q ss_pred EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc---cC
Q 018675 89 LATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA---QD 165 (352)
Q Consensus 89 l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~---~~ 165 (352)
.+....++.+.+||..+.+ .+.++.. ...-+.++ +++..|+.+..++.|.++|....+....+.... +. ..
T Consensus 109 y~ltw~~~~v~V~D~~Tl~--~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~-~g~~v~~ 182 (268)
T 3nok_A 109 YQLTWTEGLLFTWSGMPPQ--RERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL-RGQPVEL 182 (268)
T ss_dssp EEEESSSCEEEEEETTTTE--EEEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCC
T ss_pred EEEEccCCEEEEEECCcCc--EEEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC-CCccccc
Confidence 4555567889999977654 3444432 22224454 556777777678899999976555433333221 21 23
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc---------CCCCcccEEEEEEcCCCC-EEEEE
Q 018675 166 VKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES---------NNGHSSTIWALSFNAKGD-KLVSC 232 (352)
Q Consensus 166 v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~---------~~~h~~~i~~l~~~~~~~-~l~s~ 232 (352)
++.+.|. ++...+....++.|.+.|.... +....+... ...-....+.|+++|+++ +++||
T Consensus 183 lNeLe~~-dG~lyanvw~s~~I~vIDp~TG-----~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 183 INELECA-NGVIYANIWHSSDVLEIDPATG-----TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEEE-TTEEEEEETTCSEEEEECTTTC-----BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccEEe-CCEEEEEECCCCeEEEEeCCCC-----cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 4556665 5654444446778888865432 222333210 111235678999999755 45555
No 247
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.80 E-value=0.0092 Score=56.73 Aligned_cols=108 Identities=12% Similarity=0.143 Sum_probs=66.2
Q ss_pred ccEEEEeeCCC-----------eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC-CCcEEEEEccCC
Q 018675 39 APVFASCSGDK-----------TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF-DATTCIWEDVGG 106 (352)
Q Consensus 39 ~~~l~s~s~D~-----------~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d~~i~i~~~~~~ 106 (352)
+++++.||.+. .+.+||..++. |.........+.....++++.+++++++.|+. +..+.+||..+.
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCC
Confidence 46778777543 57788877653 22221111112223345677889999999985 457999998877
Q ss_pred ceeeeEeeccccCCeeEEEECCCCcEEEEee-CC-----CcEEEEecCC
Q 018675 107 DYECVATLEGHENEVKSVSWNASGTLLATCG-RD-----KSVWIWEVMP 149 (352)
Q Consensus 107 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d-----~~v~vwd~~~ 149 (352)
++.....+...... .++...+++++++.|+ .+ ..+.+||...
T Consensus 276 ~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 276 SWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ceeECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 66544333221111 2445567888888888 44 5688888753
No 248
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.78 E-value=0.0018 Score=61.81 Aligned_cols=105 Identities=8% Similarity=0.115 Sum_probs=66.0
Q ss_pred CCeEEEEecCCCceeeeeeeeeec---------------------------ceecceEEEEECCCCCEEEEEeCCC----
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEE---------------------------MHTRTVRSCAWSPSGKLLATASFDA---- 96 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~---------------------------~h~~~v~~~~~s~~~~~l~s~~~d~---- 96 (352)
|+.|..+|..+++..|+....-.. ........++++|++..+..+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 799999999999888875421100 0001113567888888888777664
Q ss_pred ---------------cEEEEEccCCceeeeEeecccc-------CCeeEEEECCCC---cEEEEeeCCCcEEEEecCCCC
Q 018675 97 ---------------TTCIWEDVGGDYECVATLEGHE-------NEVKSVSWNASG---TLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 97 ---------------~i~i~~~~~~~~~~~~~~~~h~-------~~v~~v~~~~~~---~~l~s~~~d~~v~vwd~~~~~ 151 (352)
++..+|..+++..=......|. .....+....+| ..++.++.+|.+.++|...++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 4888888777542222222231 112223333466 678999999999999987776
Q ss_pred e
Q 018675 152 E 152 (352)
Q Consensus 152 ~ 152 (352)
.
T Consensus 349 ~ 349 (677)
T 1kb0_A 349 F 349 (677)
T ss_dssp E
T ss_pred E
Confidence 4
No 249
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.76 E-value=0.0041 Score=60.19 Aligned_cols=203 Identities=10% Similarity=0.114 Sum_probs=105.5
Q ss_pred ceEEEEEC-CCCCEEEEEeC-CC----cEEEEEccCC-ceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-----CcEE
Q 018675 76 TVRSCAWS-PSGKLLATASF-DA----TTCIWEDVGG-DYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVW 143 (352)
Q Consensus 76 ~v~~~~~s-~~~~~l~s~~~-d~----~i~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~ 143 (352)
.+...+|| |||++||.+.. +| .|.++|..++ +.. ...+. .....+.|+|+++.|+....| ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC-CCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC-Ccccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 57788999 99998885543 22 4888888776 421 11111 123568899999877766655 2577
Q ss_pred EEecCCCCeeEEEEEee-cCccCeeEEEEcCCCCEEEEEeC---CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEE
Q 018675 144 IWEVMPGNEFECVSVLQ-GHAQDVKMVQWHPTMDVLFSCSY---DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWA 219 (352)
Q Consensus 144 vwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 219 (352)
++++..+..... ..+. ........+.|+|+++.|+..+. ...|.++++..... .. ....+. .......++
T Consensus 251 ~~~lgt~~~~~~-lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-~~-~~~~l~---~~~~~~~~s 324 (751)
T 2xe4_A 251 RHVMGKLQSEDV-CLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-HN-TLEIVR---PREKGVRYD 324 (751)
T ss_dssp EEETTSCGGGCE-EEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT-CC-CEEESS---CCCTTCCEE
T ss_pred EEECCCCchhcE-EEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC-Cc-eeEEee---cCCCCceEE
Confidence 777644321111 1122 22233567889999998775542 23566666543211 11 001111 123345566
Q ss_pred EEEcCCCCEEEEEeCC--CcEEEEcCCccccccCCCCcccee-eEEeecccCcceEEEEecCCceEEecCCCCeEEEEEc
Q 018675 220 LSFNAKGDKLVSCSDD--LTIKIWGADITRMQSGDGYASWRH-LCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVE 296 (352)
Q Consensus 220 l~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~ 296 (352)
+.|+..+.+++....+ +..+||.++.... ..|.. + +.......+..+.+..+.++++...++..+++..
T Consensus 325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~------~~~~~~l--i~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQP------SDWSHVL--VDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp EEEETTTEEEEEECTTTCTTCEEEEEETTST------TCCCCEE--ECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc------ccceeeE--ECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEE
Confidence 6665544455555544 4455553322100 11221 1 1111112344556665556677777777666543
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.70 E-value=0.014 Score=47.55 Aligned_cols=196 Identities=10% Similarity=0.097 Sum_probs=108.8
Q ss_pred eeeeeecCCccc--eEEEEEccCCCCCCCccEEEEeeCCC--eEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-
Q 018675 12 REIQTLEGHTDR--VWSLAWKPTAGVDGVAPVFASCSGDK--TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG- 86 (352)
Q Consensus 12 ~~~~~~~gH~~~--V~~i~~~p~~~~~~~~~~l~s~s~D~--~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~- 86 (352)
+.+.++ .|... .-++.|++. .++.+.+.+| +|+.+|+.+++...... + ..........+.+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~~-------~LyestG~~g~S~v~~vD~~tgkv~~~~~--l----~~~~fgeGi~~~~~ 75 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLRG-------HLYESTGETGRSSVRKVDLETGRILQRAE--V----PPPYFGAGIVAWRD 75 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEETT-------EEEEEECCTTSCEEEEEETTTCCEEEEEE--C----CTTCCEEEEEEETT
T ss_pred EEEEEc-CCCCccccccEEEECC-------EEEEECCCCCCceEEEEECCCCCEEEEEe--C----CCCcceeEEEEeCC
Confidence 555666 56654 458999873 4677777754 89999998876432211 1 1122222223334
Q ss_pred CEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCc---
Q 018675 87 KLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHA--- 163 (352)
Q Consensus 87 ~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~--- 163 (352)
++.+....++.+.+||..+.+ .+.++.. ...=+.++ +++..|+.+..+++|.++|....+....+..-. +.
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~--~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~ 149 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLT--PRARFRY-PGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPL 149 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTE--EEEEEEC-SSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEEC
T ss_pred EEEEEEeeCCEEEEEECCcCc--EEEEEeC-CCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCccc
Confidence 444455567889999977653 3444432 22224554 456666656668899999976554433332211 11
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeecc-----C----CCCcccEEEEEEcCCCCEEEEEe
Q 018675 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISES-----N----NGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-----~----~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
..++.+.+. ++...+....+..|.+.|.... +....+... . ..-....+.|+++|+++.|...+
T Consensus 150 ~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG-----~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 150 DNLNELEWV-NGELLANVWLTSRIARIDPASG-----KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEEECTTTC-----BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccceeeEEe-CCEEEEEECCCCeEEEEECCCC-----CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 234455554 5554444446778888765432 222222210 0 11234678999999766555444
No 251
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.66 E-value=0.049 Score=52.86 Aligned_cols=283 Identities=10% Similarity=0.060 Sum_probs=145.2
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIW 101 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~ 101 (352)
..|.++...++ + .+-.|..++-|..|+..+... ..... -.......|.++...++|++.+ |+.++.+..+
T Consensus 363 ~~v~~i~~d~~------g-~lWigt~~~Gl~~~~~~~~~~-~~~~~-~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~ 432 (781)
T 3v9f_A 363 KVVSSVCDDGQ------G-KLWIGTDGGGINVFENGKRVA-IYNKE-NRELLSNSVLCSLKDSEGNLWF-GTYLGNISYY 432 (781)
T ss_dssp SCEEEEEECTT------S-CEEEEEBSSCEEEEETTEEEE-ECC------CCCSBEEEEEECTTSCEEE-EETTEEEEEE
T ss_pred cceEEEEEcCC------C-CEEEEeCCCcEEEEECCCCeE-EEccC-CCCCCCcceEEEEECCCCCEEE-EeccCCEEEE
Confidence 45777766553 2 244445555677777653211 00000 0011235788998888887655 6666778888
Q ss_pred EccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEee---cCccCeeEEEEcCCCCEE
Q 018675 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ---GHAQDVKMVQWHPTMDVL 178 (352)
Q Consensus 102 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l 178 (352)
+..++..............|.++...+++.+.+. +. +-|..+|...+.. ....... .....|.++...+++.+
T Consensus 433 ~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~l- 508 (781)
T 3v9f_A 433 NTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGRF- 508 (781)
T ss_dssp CSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCCE-
T ss_pred cCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCCCCE-
Confidence 7655543221110113457889988888876554 34 4477888654322 1111111 01245778887777764
Q ss_pred EEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccce
Q 018675 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWR 258 (352)
Q Consensus 179 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (352)
..|+.++-+..|+.... . ...+.....-....|.++...++|.+.++.. +|.+..||.+..+...
T Consensus 509 Wigt~~~Gl~~~~~~~~---~---~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~-------- 573 (781)
T 3v9f_A 509 WIGTFGGGVGIYTPDMQ---L---VRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQV-------- 573 (781)
T ss_dssp EEEESSSCEEEECTTCC---E---EEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEE--------
T ss_pred EEEEcCCCEEEEeCCCC---e---EEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEE--------
Confidence 45555444666753221 1 1122111111235789999999998777554 6765778754322110
Q ss_pred eeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccc---cCcceeEEEecCCCcceEE
Q 018675 259 HLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKA---HDMDVNSVQWSPGERRLLA 335 (352)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~i~~~~~sp~~~~~l~ 335 (352)
.....+.....+.++..++++.+-.++.+|.. .++...... .. .....+ ......++...++|. ++
T Consensus 574 -~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~-~~~~~~~~~------~~-~~~~dGl~~~~f~~~~~~~~~~G~-l~- 642 (781)
T 3v9f_A 574 -FQRKEGLPNTHIRAISEDKNGNIWASTNTGIS-CYITSKKCF------YT-YDHSNNIPQGSFISGCVTKDHNGL-IY- 642 (781)
T ss_dssp -ECGGGTCSCCCCCEEEECSSSCEEEECSSCEE-EEETTTTEE------EE-ECGGGTCCSSCEEEEEEEECTTSC-EE-
T ss_pred -ccccCCCCCceEEEEEECCCCCEEEEcCCceE-EEECCCCce------EE-ecccCCccccccccCceEECCCCE-EE-
Confidence 00001112345667777777766666666644 443322111 00 011111 112234666677775 44
Q ss_pred EecCCCeEE
Q 018675 336 SASDDGMIK 344 (352)
Q Consensus 336 s~~~Dg~i~ 344 (352)
-|+.+|.++
T Consensus 643 ~g~~~Gl~~ 651 (781)
T 3v9f_A 643 FGSINGLCF 651 (781)
T ss_dssp EEETTEEEE
T ss_pred EECCCceEE
Confidence 466677543
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.64 E-value=0.019 Score=47.38 Aligned_cols=212 Identities=9% Similarity=0.160 Sum_probs=119.1
Q ss_pred eeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC
Q 018675 15 QTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 15 ~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 94 (352)
+.+.|=.+.+.+++|.|+. +.+++....++.|...+.. ++ +..... +. -....-.+++.+++.++++.-.
T Consensus 20 ~~l~g~~~~lSGla~~~~~-----~~L~aV~d~~~~I~~ld~~-g~-v~~~i~-l~--g~~D~EGIa~~~~g~~~vs~E~ 89 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQS-----NTLFSTINKPAAIVEMTTN-GD-LIRTIP-LD--FVKDLETIEYIGDNQFVISDER 89 (255)
T ss_dssp EECTTCCSCEEEEEEETTT-----TEEEEEEETTEEEEEEETT-CC-EEEEEE-CS--SCSSEEEEEECSTTEEEEEETT
T ss_pred eECCCcccCcceeEEeCCC-----CEEEEEECCCCeEEEEeCC-CC-EEEEEe-cC--CCCChHHeEEeCCCEEEEEECC
Confidence 4666777789999999974 2455555567777777765 32 222111 11 1134567788888887776556
Q ss_pred CCcEEEEEccCCce-eeeEee------ccccCCeeEEEECCCCcEEEEeeCCCcEEEEecC---CCCeeEEEEE--e--e
Q 018675 95 DATTCIWEDVGGDY-ECVATL------EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVM---PGNEFECVSV--L--Q 160 (352)
Q Consensus 95 d~~i~i~~~~~~~~-~~~~~~------~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~---~~~~~~~~~~--~--~ 160 (352)
++.+.+++...... ...... ...+.....++|+|.++.|.++.......+|... .......... + .
T Consensus 90 ~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~ 169 (255)
T 3qqz_A 90 DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQ 169 (255)
T ss_dssp TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHT
T ss_pred CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccc
Confidence 67788876543321 111111 1234557899999998777777766555666553 1111222110 0 0
Q ss_pred cCccCeeEEEEcCCCCE-EEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCC---CcccEEEEEEcCCCCEEEEEeCCC
Q 018675 161 GHAQDVKMVQWHPTMDV-LFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNG---HSSTIWALSFNAKGDKLVSCSDDL 236 (352)
Q Consensus 161 ~h~~~v~~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~---h~~~i~~l~~~~~~~~l~s~~~dg 236 (352)
.+......++++|.... ++.....+.+..+|.... ......+.....+ --...-.|+|.++|+++++ ++-+
T Consensus 170 ~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~----~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n 244 (255)
T 3qqz_A 170 FTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE----VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN 244 (255)
T ss_dssp CCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred cccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC----EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence 12345678999996554 455555667777764332 1112222211100 0135567999999997777 5555
Q ss_pred cEEEE
Q 018675 237 TIKIW 241 (352)
Q Consensus 237 ~i~iw 241 (352)
.+..|
T Consensus 245 ~~y~f 249 (255)
T 3qqz_A 245 RFYRF 249 (255)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 55555
No 253
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.59 E-value=0.037 Score=49.57 Aligned_cols=154 Identities=11% Similarity=0.120 Sum_probs=87.7
Q ss_pred eEEEEECC-CCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-CC----cEEEEecCCC
Q 018675 77 VRSCAWSP-SGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-DK----SVWIWEVMPG 150 (352)
Q Consensus 77 v~~~~~s~-~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~----~v~vwd~~~~ 150 (352)
...++++| ++..|..+...+.|..++..++... .+.........++|+++++.|+.+.. ++ .+.+.+ ..+
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~---~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g 214 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS---TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RES 214 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE---EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE---EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCC
Confidence 46788898 3444544444477888877654332 22223456889999999996555543 22 233333 222
Q ss_pred CeeEEEEEeecCccCeeEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-E
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD-K 228 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~-~ 228 (352)
.... ...+.. ......++++| ++.++++-..++.|..++..... ...+... +.......|+|+|+++ +
T Consensus 215 ~~~~-~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~------~~~~~~~--~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 215 GFKV-ITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE------TTPLFTI--QDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp TSCS-EEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE------EEEEEEC--SSSSCCEEEEECTTSSEE
T ss_pred ceee-eeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc------EEEEEEc--CCCCcceeEEEcCCCCEE
Confidence 2110 011111 12345678899 66666666667888888754321 1111111 1123466899999999 4
Q ss_pred EEEEeCCCcEEEEcCC
Q 018675 229 LVSCSDDLTIKIWGAD 244 (352)
Q Consensus 229 l~s~~~dg~i~iwd~~ 244 (352)
+++-...++|..++.+
T Consensus 285 yv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 285 YIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEETTTTEEEEEEEE
T ss_pred EEEECCCCEEEEEeCC
Confidence 5565677889988754
No 254
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.58 E-value=0.0071 Score=57.52 Aligned_cols=113 Identities=17% Similarity=0.209 Sum_probs=71.2
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEEccCCceeeeEeecc-ccCCeeEEEECCCCcEEEEeeC-CCcEEE
Q 018675 79 SCAWSP-SGKLLATASFDA-----------TTCIWEDVGGDYECVATLEG-HENEVKSVSWNASGTLLATCGR-DKSVWI 144 (352)
Q Consensus 79 ~~~~s~-~~~~l~s~~~d~-----------~i~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~-d~~v~v 144 (352)
++++.+ ++++++.|+.+. .+.+||..++++..+..+.. +.....++++..++.+++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556777 889999988653 47788887776655544432 2223335677788999998884 458999
Q ss_pred EecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe-CC-----CcEEEEecC
Q 018675 145 WEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YD-----NTIKVWWAE 193 (352)
Q Consensus 145 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d-----~~i~iw~~~ 193 (352)
||.... ....+..+. ....-.++...+++++++.|+ .+ ..+.+||..
T Consensus 270 yd~~t~-~W~~~~~~~-~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 270 YDSSSD-SWIPGPDMQ-VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEGGGT-EEEECCCCS-SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ecCcCC-ceeECCCCC-ccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 997643 222221111 111122455667888888888 34 468888764
No 255
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.57 E-value=0.031 Score=48.06 Aligned_cols=236 Identities=12% Similarity=0.187 Sum_probs=119.5
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEe-eccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCee
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT-LEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 153 (352)
..+.++.|.+++..+++ +.++.+....+....+..+.. .......+.++.+.+ +..+ .++.++.|.. ....+...
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~-~~g~~g~i~~-S~DgG~tW 111 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGW-IVGEPPIMLH-TTDGGQSW 111 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEE-EEEETTEEEE-ESSTTSSC
T ss_pred CcEEEEEECCCCcEEEE-cCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEE-EEECCCeEEE-ECCCCCCc
Confidence 46889999877777774 556765333222223332221 111234688898876 4444 4556665433 22234443
Q ss_pred EEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe
Q 018675 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
..+.....+...+..+.+.+++..++ ++.++.| |...+ ...+|..... +....+.++.+.|++.+++.+.
T Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~g~v--~~S~D-gG~tW~~~~~------~~~~~~~~~~~~~~~~~~~~g~ 181 (327)
T 2xbg_A 112 SQIPLDPKLPGSPRLIKALGNGSAEM-ITNVGAI--YRTKD-SGKNWQALVQ------EAIGVMRNLNRSPSGEYVAVSS 181 (327)
T ss_dssp EECCCCTTCSSCEEEEEEEETTEEEE-EETTCCE--EEESS-TTSSEEEEEC------SCCCCEEEEEECTTSCEEEEET
T ss_pred eECccccCCCCCeEEEEEECCCCEEE-EeCCccE--EEEcC-CCCCCEEeec------CCCcceEEEEEcCCCcEEEEEC
Confidence 33221111223456666666555444 4456654 32222 2234544321 2345688999999988877665
Q ss_pred CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeec
Q 018675 234 DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKK 313 (352)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
..+.++-.|- +...|..... .....+..+.+.+++.+..++.+|.++...... ......+...
T Consensus 182 ~G~~~~S~d~---------gG~tW~~~~~---~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~-----G~tW~~~~~~ 244 (327)
T 2xbg_A 182 RGSFYSTWEP---------GQTAWEPHNR---TTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDN-----SENWGELLSP 244 (327)
T ss_dssp TSSEEEEECT---------TCSSCEEEEC---CSSSCEEEEEECTTSCEEEEETTTEEEEEETTE-----EEEECCCBCT
T ss_pred CCcEEEEeCC---------CCCceeECCC---CCCCccceeEECCCCCEEEEeCCceEEEecCCC-----CCeeEeccCC
Confidence 4433333331 1134443321 223456677777777666666677765542110 1111111111
Q ss_pred ccccCcceeEEEecCCCcceEEEecCCCeE
Q 018675 314 EKAHDMDVNSVQWSPGERRLLASASDDGMI 343 (352)
Q Consensus 314 ~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i 343 (352)
...+...+.++++.|++. +++.+ .+|.|
T Consensus 245 ~~~~~~~~~~v~~~~~~~-~~~~g-~~g~i 272 (327)
T 2xbg_A 245 LRRNSVGFLDLAYRTPNE-VWLAG-GAGAL 272 (327)
T ss_dssp TSSCCSCEEEEEESSSSC-EEEEE-STTCE
T ss_pred cccCCcceEEEEecCCCE-EEEEe-CCCeE
Confidence 012334588999988664 55544 46655
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.54 E-value=0.075 Score=51.67 Aligned_cols=292 Identities=8% Similarity=0.084 Sum_probs=154.0
Q ss_pred eEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEc
Q 018675 24 VWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWED 103 (352)
Q Consensus 24 V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 103 (352)
|.++...++ +.+.+ +..++-+..|+..+.... ..........|.++...++|.+.+ |+.++.+.+|+.
T Consensus 175 i~~i~~d~~------g~lwi-gt~~~Gl~~~~~~~~~~~----~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~ 242 (795)
T 4a2l_A 175 IASTLYRQG------DQIYI-GTSTDGLYTYSITQKTFE----KVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINP 242 (795)
T ss_dssp CEEEEEEET------TEEEE-EESSSCEEEEETTTCCEE----ECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEET
T ss_pred eEEEEECCC------CCEEE-EECCCCEEEEeCCCCeEE----EecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeC
Confidence 666665543 23333 455545777876554211 110011235688888887777655 454545888887
Q ss_pred cCCceeeeEeec-----cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe-----ecCccCeeEEEEcC
Q 018675 104 VGGDYECVATLE-----GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL-----QGHAQDVKMVQWHP 173 (352)
Q Consensus 104 ~~~~~~~~~~~~-----~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-----~~h~~~v~~~~~~~ 173 (352)
.++......... -....|.++...++|.+.+.. .+ -|.+++.... ........ .-....|.++...+
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~D~ 319 (795)
T 4a2l_A 243 KTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-DLNIYHEGTD-SFASYSSNPVENGSLSQRSVRSIFMDS 319 (795)
T ss_dssp TTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-CEEEEETTTT-EEEEECCCTTSTTSCSSSCEEEEEECT
T ss_pred CCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CC-hhheEcCCCC-eEEEEecCCCCCCCCCCCcEEEEEEeC
Confidence 655432221110 013568999988888876543 44 4888886433 22111100 00124578888877
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCC
Q 018675 174 TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDG 253 (352)
Q Consensus 174 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (352)
++. +..|+.++-|..|+.... .+...........-....|.++...++|.+.+ |+.++-|..|+...........
T Consensus 320 ~g~-lWigt~~~Gl~~~~~~~~---~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~ 394 (795)
T 4a2l_A 320 QGG-MWLGTYFGGLNYYHPIRN---RFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTL 394 (795)
T ss_dssp TSC-EEEEESSSCEEEECGGGG---SSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECC
T ss_pred CcC-EEEEECCCCeEEeCCCcc---cceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEec
Confidence 776 567777778888854322 12111111100111245799999999988666 5666668888754322110000
Q ss_pred CccceeeEEee-cccCcceEEEEecCCce-EEecCCCCeEEEEEccCCccccCcccceeee-cccccCcceeEEEecCCC
Q 018675 254 YASWRHLCTIS-GYHDRTIFSVHWSREGI-IASGAADDSVQFFVESKDDLIDGPSYKMLLK-KEKAHDMDVNSVQWSPGE 330 (352)
Q Consensus 254 ~~~~~~~~~~~-~~~~~~i~~~~~~~~~~-~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~i~~~~~sp~~ 330 (352)
...... +.....|.++..++++. +-.|..++.+..++....... .... ........|.++...+++
T Consensus 395 -----~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~------~~~~~~~~l~~~~v~~i~~d~~g 463 (795)
T 4a2l_A 395 -----QEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE------NFNQRNSQLVNENVYAILPDGEG 463 (795)
T ss_dssp -----C------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE------EECTTTSCCSCSCEEEEEECSSS
T ss_pred -----CCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE------EeecCCCCcCCCeeEEEEECCCC
Confidence 000000 11235678888777776 777777677777765432110 0000 001234578999988877
Q ss_pred cceEEEecCCCeEEEEeec
Q 018675 331 RRLLASASDDGMIKIWELA 349 (352)
Q Consensus 331 ~~~l~s~~~Dg~i~iw~~~ 349 (352)
. +.+ |+.+| |.+|+..
T Consensus 464 ~-lwi-gt~~G-l~~~~~~ 479 (795)
T 4a2l_A 464 N-LWL-GTLSA-LVRFNPE 479 (795)
T ss_dssp C-EEE-EESSC-EEEEETT
T ss_pred C-EEE-EecCc-eeEEeCC
Confidence 5 443 33344 6666653
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.53 E-value=0.04 Score=50.91 Aligned_cols=190 Identities=11% Similarity=0.074 Sum_probs=111.5
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEE-C-CCCCEEEEEe------------------CCCcEE
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAW-S-PSGKLLATAS------------------FDATTC 99 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~-s-~~~~~l~s~~------------------~d~~i~ 99 (352)
.++++...++.|.+-|+.+.+. ..++.--.......+++ + |+++++.+++ .++.+.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~----~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKC----DAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEE----EEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCceE----eeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 3455555667899999887642 22221111234567777 5 8999988774 234677
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC--------------------------------------c
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK--------------------------------------S 141 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--------------------------------------~ 141 (352)
+.|..+.+ ....+.- .+....++.+|+|.++++++.+. .
T Consensus 179 vID~~t~~--v~~qI~V-gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 179 AVDADKWE--VAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEETTTTE--EEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEECCCCe--EEEEEEe-CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 77766543 2232221 11345677899999988887553 3
Q ss_pred EEEEecCC--CCe-eEEEEEeecCccCeeEEEEcCCCCEEEEEe-CCCcEEEEecCCCC------CC-CceeEeeeeccC
Q 018675 142 VWIWEVMP--GNE-FECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YDNTIKVWWAEDTD------SD-NWHCVQTISESN 210 (352)
Q Consensus 142 v~vwd~~~--~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~iw~~~~~~------~~-~~~~~~~~~~~~ 210 (352)
|.|.|... +.. ...+.. .....++.++||++++++++ .+..+.++++.... .. .......+
T Consensus 256 V~VID~~~~~~~~~~~~Ipv----g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v---- 327 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPI----ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP---- 327 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEE----ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC----
T ss_pred EEEEeCcccCCceeEEEEec----CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc----
Confidence 44555443 111 111111 11344688999999877665 57889999876321 00 00011111
Q ss_pred CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 211 NGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 211 ~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
.-+.....++|+|+|...++.--|+.|.+|+++.
T Consensus 328 -~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 328 -ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp -BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred -CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 1234577899999995556677899999998753
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.51 E-value=0.034 Score=47.16 Aligned_cols=237 Identities=15% Similarity=0.115 Sum_probs=119.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC--cEEEEecCCCCee
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK--SVWIWEVMPGNEF 153 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~ 153 (352)
....++|+++|+++++-..++.|..++..+. ...... ....+..+++.++++++++..... .|..+|...+. .
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~---~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~-~ 107 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT---VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-V 107 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE---CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-E
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe---CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-E
Confidence 4577899999998777767888988876543 222222 234688999999999766654432 35556654443 2
Q ss_pred EEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEee-eec-cCCCCcccEEEEEEcCCCCEE-E
Q 018675 154 ECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT-ISE-SNNGHSSTIWALSFNAKGDKL-V 230 (352)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~-~~~-~~~~h~~~i~~l~~~~~~~~l-~ 230 (352)
..+... ........+...+.+..+++-..++.|..++...... ....... +.. ...+.....+.| +|++.+| +
T Consensus 108 ~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~-~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 108 ETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG-SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp EEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE-EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred EEEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE-eEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 222221 1111223334444444444444577777776432100 0000000 000 001111234555 7787654 5
Q ss_pred EEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCc-eEEecCCCCeEEEEEccCCccccCcccce
Q 018675 231 SCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREG-IIASGAADDSVQFFVESKDDLIDGPSYKM 309 (352)
Q Consensus 231 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~ 309 (352)
+-...++|..++.+.... .......... .....+++++++ ++++....+.|..++.... + ..
T Consensus 184 ~d~~~~~I~~~~~~~~g~-----~~~~~~~~~~-----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~-~------~~ 246 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDK-----PGEPEIFVEQ-----TNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS-T------TI 246 (306)
T ss_dssp EETTTTEEEEEEBCTTSC-----BCCCEEEEES-----CCCSSEEEBTTCCEEEECBTTCCEEEECTTCC-E------EE
T ss_pred EeCCCCEEEEEEeCCCCC-----CCccEEEecc-----CCCCCeEECCCCCEEEEeCCCCeEEEECCCCC-E------EE
Confidence 555678899998753100 0000111110 123345666665 4444445667777754311 0 00
Q ss_pred eeecccccCcceeEEEec---CCCcceEEEecC
Q 018675 310 LLKKEKAHDMDVNSVQWS---PGERRLLASASD 339 (352)
Q Consensus 310 ~~~~~~~h~~~i~~~~~s---p~~~~~l~s~~~ 339 (352)
+..........++++|. |+++.++++.+.
T Consensus 247 -~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 247 -IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -EECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -EeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 11111112458899998 887777776653
No 259
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.45 E-value=0.035 Score=45.76 Aligned_cols=168 Identities=13% Similarity=0.184 Sum_probs=100.6
Q ss_pred cceEEEEECCCCCEE-EEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCee
Q 018675 75 RTVRSCAWSPSGKLL-ATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEF 153 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l-~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 153 (352)
..+..++++|++..| ++...++.|...|.. ++......+.+ ......|++.+++.++++.-.++.+.++++......
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 468899999976654 456667777777765 44322222333 245778888888877676656778888887654432
Q ss_pred EEEEEee------cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCC-CCceeEeeeeccCCCCcccEEEEEEcCC-
Q 018675 154 ECVSVLQ------GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDS-DNWHCVQTISESNNGHSSTIWALSFNAK- 225 (352)
Q Consensus 154 ~~~~~~~------~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~h~~~i~~l~~~~~- 225 (352)
..+.... ......-.++|.|.+..|+++.+.....+|....... ...............+...+.+|+++|.
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 2222211 1234567999999988888887766666665432111 1111110000000112335678999996
Q ss_pred CCEEEEEeCCCcEEEEcCC
Q 018675 226 GDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 226 ~~~l~s~~~dg~i~iwd~~ 244 (352)
+++++....+..+.++|.+
T Consensus 185 g~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp TEEEEEETTTTEEEEECTT
T ss_pred CeEEEEECCCCeEEEEcCC
Confidence 5566677777888888865
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.42 E-value=0.1 Score=50.62 Aligned_cols=293 Identities=9% Similarity=0.159 Sum_probs=155.9
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeee---eecceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV---LEEMHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
..|+++...++ +.+. .|..+ -|.+|+..+.. +...... ........|.++...++|.+- .|+.++.+
T Consensus 263 ~~i~~i~~d~~------g~lW-igt~~-Gl~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl 332 (795)
T 4a2l_A 263 NYIRSLAMDSQ------NRLW-IGTFN-DLNIYHEGTDS-FASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGL 332 (795)
T ss_dssp SBEEEEEECTT------SCEE-EEESS-CEEEEETTTTE-EEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCE
T ss_pred CeEEEEEEcCC------CCEE-EEeCC-hhheEcCCCCe-EEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCe
Confidence 46777776654 2333 33344 57778866542 1111100 001123579999999988754 47777788
Q ss_pred EEEEccCCceeeeEeec----cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEee------cCccCeeE
Q 018675 99 CIWEDVGGDYECVATLE----GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQ------GHAQDVKM 168 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~------~h~~~v~~ 168 (352)
..++..+.......... -....|.++...++|.+.+ |+.++-|..|+..... ........ -....|.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~ 410 (795)
T 4a2l_A 333 NYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQR-FTSYTLQEDESARGIGSNNIKA 410 (795)
T ss_dssp EEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCC-EEEECCC------CCSCSCEEE
T ss_pred EEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCc-EEEEecCCCCcccCCCCccEEE
Confidence 88876544332221111 0234689998888887655 5666668888865432 11111000 11346788
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeec-cCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccc
Q 018675 169 VQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISE-SNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITR 247 (352)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~-~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~ 247 (352)
+...+++..|..|+.++.+..++..... . ..+.. ........|.++...++|.+.++.. +| +.+|+.+...
T Consensus 411 i~~d~~g~~lWigt~~~Gl~~~d~~~~~---~---~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~~~~~~ 482 (795)
T 4a2l_A 411 VYVDEKKSLVYIGTHAGGLSILHRNSGQ---V---ENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SA-LVRFNPEQRS 482 (795)
T ss_dssp EEEETTTTEEEEEETTTEEEEEETTTCC---E---EEECTTTSCCSCSCEEEEEECSSSCEEEEES-SC-EEEEETTTTE
T ss_pred EEEcCCCCEEEEEeCcCceeEEeCCCCc---E---EEeecCCCCcCCCeeEEEEECCCCCEEEEec-Cc-eeEEeCCCCe
Confidence 8887787756778887778888754321 1 11111 0112345799999999998777554 44 7778754322
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEec
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWS 327 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 327 (352)
......... ........+.++..++++.+-.+..+ .+..++...... . ..............|.++...
T Consensus 483 ~~~~~~~~~------~~~~~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~-~---~~~~~~~~~l~~~~i~~i~~d 551 (795)
T 4a2l_A 483 FTTIEKEKD------GTPVVSKQITTLFRDSHKRLWIGGEE-GLSVFKQEGLDI-Q---KASILPVSNVTKLFTNCIYEA 551 (795)
T ss_dssp EEECCBCTT------CCBCCCCCEEEEEECTTCCEEEEESS-CEEEEEEETTEE-E---ECCCSCSCGGGGSCEEEEEEC
T ss_pred EEEcccccc------ccccCCceEEEEEECCCCCEEEEeCC-ceEEEeCCCCeE-E---EecCCCCCCCCCCeeEEEEEC
Confidence 111000000 00112345777877777755555554 455554432211 0 000000011234578999988
Q ss_pred CCCcceEEEecCCCeEEEEee
Q 018675 328 PGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 328 p~~~~~l~s~~~Dg~i~iw~~ 348 (352)
+++. +.+++ ..| |..|+.
T Consensus 552 ~~g~-lWigT-~~G-l~~~d~ 569 (795)
T 4a2l_A 552 SNGI-IWVGT-REG-FYCFNE 569 (795)
T ss_dssp TTSC-EEEEE-SSC-EEEEET
T ss_pred CCCC-EEEEe-CCC-ceeECC
Confidence 8876 44333 334 555654
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.37 E-value=0.052 Score=46.00 Aligned_cols=208 Identities=13% Similarity=0.086 Sum_probs=115.4
Q ss_pred eeeeeecCCccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEE
Q 018675 12 REIQTLEGHTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLAT 91 (352)
Q Consensus 12 ~~~~~~~gH~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 91 (352)
+.+..+... ....+++|.|+ +.++++-..++.|..|+...... .... .......++++++|+++++
T Consensus 23 ~~~~~~p~~-~~pegia~~~~------g~lyv~d~~~~~I~~~d~~g~~~-----~~~~--~~~~p~gia~~~dG~l~va 88 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPD------GTIFVTNHEVGEIVSITPDGNQQ-----IHAT--VEGKVSGLAFTSNGDLVAT 88 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTT------SCEEEEETTTTEEEEECTTCCEE-----EEEE--CSSEEEEEEECTTSCEEEE
T ss_pred eEeEeCCCC-CCcceEEECCC------CCEEEEeCCCCeEEEECCCCceE-----EEEe--CCCCceeEEEcCCCcEEEE
Confidence 445555432 45678999886 35677766788999898764311 1111 1245788999999997766
Q ss_pred EeCCCc--EEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEE--------eec
Q 018675 92 ASFDAT--TCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSV--------LQG 161 (352)
Q Consensus 92 ~~~d~~--i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~--------~~~ 161 (352)
...... +..++..+++...+..... ......++..+.+..+++-..++.|.++|...+. ...... ...
T Consensus 89 d~~~~~~~v~~~d~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~-~~v~~~~~~~~~~~~~~ 166 (306)
T 2p4o_A 89 GWNADSIPVVSLVKSDGTVETLLTLPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS-GSIWLEHPMLARSNSES 166 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEECTT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE-EEEEEECGGGSCSSTTC
T ss_pred eccCCcceEEEEcCCCCeEEEEEeCCC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCc-EeEEEECCccccccccC
Confidence 544333 5555655555443333221 1223444545555555555567888888754321 111100 000
Q ss_pred CccCeeEEEEcCCCCEEEE-EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEE
Q 018675 162 HAQDVKMVQWHPTMDVLFS-CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKI 240 (352)
Q Consensus 162 h~~~v~~~~~~~~~~~l~s-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~i 240 (352)
.......+ +|++..|+. -...+.|..++.... ........+.. ......++++++|.++++....+.|.+
T Consensus 167 ~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~--g~~~~~~~~~~-----~~~P~gi~vd~dG~l~va~~~~~~V~~ 237 (306)
T 2p4o_A 167 VFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDST--DKPGEPEIFVE-----QTNIDDFAFDVEGNLYGATHIYNSVVR 237 (306)
T ss_dssp CSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTT--SCBCCCEEEEE-----SCCCSSEEEBTTCCEEEECBTTCCEEE
T ss_pred CCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCC--CCCCccEEEec-----cCCCCCeEECCCCCEEEEeCCCCeEEE
Confidence 11123344 777776554 445678888886531 11100111110 012345789999998888877889999
Q ss_pred EcCC
Q 018675 241 WGAD 244 (352)
Q Consensus 241 wd~~ 244 (352)
++.+
T Consensus 238 ~~~~ 241 (306)
T 2p4o_A 238 IAPD 241 (306)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9753
No 262
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.25 E-value=0.084 Score=46.00 Aligned_cols=256 Identities=13% Similarity=0.113 Sum_probs=132.3
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccccC
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHEN 119 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~ 119 (352)
..++.++.|+.|..+|..+++..|+....- .....++ . .+..++.++.++.+..+|..+++.. ...... .
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~p~----~--~~~~v~v~~~~g~l~~~d~~tG~~~--W~~~~~-~ 173 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTKVAG-EALSRPV----V--SDGLVLIHTSNGQLQALNEADGAVK--WTVNLD-M 173 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECSS-CCCSCCE----E--ETTEEEEECTTSEEEEEETTTCCEE--EEEECC-C
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEeCCC-ceEcCCE----E--ECCEEEEEcCCCeEEEEECCCCcEE--EEEeCC-C
Confidence 457777889999999999888777543211 1111111 1 2456777888999999998776532 121111 1
Q ss_pred Ce------eEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCcc-------CeeEEEEcC--CCCEEEEEeCC
Q 018675 120 EV------KSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQ-------DVKMVQWHP--TMDVLFSCSYD 184 (352)
Q Consensus 120 ~v------~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~-------~v~~~~~~~--~~~~l~s~~~d 184 (352)
.+ ..... .+..++.+..++.+..+|...++.. ........ .+..+...| .+..++.++.+
T Consensus 174 ~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~---w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~ 248 (376)
T 3q7m_A 174 PSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMI---WQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYN 248 (376)
T ss_dssp -----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEE---EEEECCC-----------CCCCCCEEETTEEEEECTT
T ss_pred CceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEE---EEEecccCCCCcccccccccCCCcEEECCEEEEEecC
Confidence 11 11111 1346777888899999998766532 11111100 000000111 24567788889
Q ss_pred CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEee
Q 018675 185 NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTIS 264 (352)
Q Consensus 185 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 264 (352)
+.+..++..... ...... . .....+.. ++..+..++.++.+..+|.+..+. .|+. .
T Consensus 249 g~l~~~d~~tG~-----~~w~~~--~----~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~-------~w~~----~ 304 (376)
T 3q7m_A 249 GNLTALDLRSGQ-----IMWKRE--L----GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVT-------LWTQ----S 304 (376)
T ss_dssp SCEEEEETTTCC-----EEEEEC--C----CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCE-------EEEE----C
T ss_pred cEEEEEECCCCc-----EEeecc--C----CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcE-------EEee----c
Confidence 999999765432 111111 1 11223333 356777788899999998653221 1211 0
Q ss_pred cccCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeE-EEecCCCcceEEEecCCCeE
Q 018675 265 GYHDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNS-VQWSPGERRLLASASDDGMI 343 (352)
Q Consensus 265 ~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~sp~~~~~l~s~~~Dg~i 343 (352)
............ .++.+..++.++.+..++.....+. .........+.. ... .++ .++ .++.||.|
T Consensus 305 ~~~~~~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~~~---------~~~~~~~~~~~~~~~~-~~~-~l~-v~~~~G~l 371 (376)
T 3q7m_A 305 DLLHRLLTSPVL-YNGNLVVGDSEGYLHWINVEDGRFV---------AQQKVDSSGFQTEPVA-ADG-KLL-IQAKDGTV 371 (376)
T ss_dssp TTTTSCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEE---------EEEECCTTCBCSCCEE-ETT-EEE-EEBTTSCE
T ss_pred ccCCCcccCCEE-ECCEEEEEeCCCeEEEEECCCCcEE---------EEEecCCCcceeCCEE-ECC-EEE-EEeCCCEE
Confidence 000011111111 2467778888898888875433221 111111112221 222 244 344 57889999
Q ss_pred EEEe
Q 018675 344 KIWE 347 (352)
Q Consensus 344 ~iw~ 347 (352)
..|+
T Consensus 372 ~~~~ 375 (376)
T 3q7m_A 372 YSIT 375 (376)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8886
No 263
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.23 E-value=0.1 Score=49.57 Aligned_cols=196 Identities=12% Similarity=0.141 Sum_probs=103.3
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeeccee-----cce-EEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEe
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHT-----RTV-RSCAWSPSGKLLATASFDATTCIWEDVGGDYECVAT 113 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~-----~~v-~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~ 113 (352)
..++.++.++.|.-+|..+++.+|+.......... ..+ ..+++ .+..++.++.|+.+..+|..+++..=...
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 46777788999999999999988876432111000 000 11112 34567778889999999988776321111
Q ss_pred ecccc--CCeeE-EEECCCCcEEEEeeC------CCcEEEEecCCCCeeEEEEEeecCc---------------------
Q 018675 114 LEGHE--NEVKS-VSWNASGTLLATCGR------DKSVWIWEVMPGNEFECVSVLQGHA--------------------- 163 (352)
Q Consensus 114 ~~~h~--~~v~~-v~~~~~~~~l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~h~--------------------- 163 (352)
..... ..+.+ ... .++ .++.+.. ++.|..+|...++..-......+..
T Consensus 145 ~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 145 TTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp CSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred cCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 11110 11111 001 133 4444432 5889999987776422221111100
Q ss_pred -------cCeeEEEEcCCCCEEEEEeCCCc-------------------EEEEecCCCCCCCceeEeeeeccCCCCc---
Q 018675 164 -------QDVKMVQWHPTMDVLFSCSYDNT-------------------IKVWWAEDTDSDNWHCVQTISESNNGHS--- 214 (352)
Q Consensus 164 -------~~v~~~~~~~~~~~l~s~~~d~~-------------------i~iw~~~~~~~~~~~~~~~~~~~~~~h~--- 214 (352)
.....+++.|....++.++.++. |..+|..... ..|. ... ..|.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~-~~W~----~~~--~~~~~wd 295 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK-LAWH----YQV--TPGDSWD 295 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC-EEEE----EES--STTCCSC
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc-eeeE----eec--CCCcccc
Confidence 00123577787778887776653 6666554321 1121 111 0111
Q ss_pred ----ccEEEEEEcCCCC---EEEEEeCCCcEEEEcCCcc
Q 018675 215 ----STIWALSFNAKGD---KLVSCSDDLTIKIWGADIT 246 (352)
Q Consensus 215 ----~~i~~l~~~~~~~---~l~s~~~dg~i~iwd~~~~ 246 (352)
.+.....+..+|+ .++.++.+|.+.++|.+..
T Consensus 296 ~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 296 FTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred ccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC
Confidence 2222223333554 6888999999999986543
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.13 E-value=0.055 Score=46.13 Aligned_cols=159 Identities=10% Similarity=0.105 Sum_probs=97.8
Q ss_pred EEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeec-----ceecceEEEEE---CCCCCEEEEEe----
Q 018675 26 SLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEE-----MHTRTVRSCAW---SPSGKLLATAS---- 93 (352)
Q Consensus 26 ~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~---s~~~~~l~s~~---- 93 (352)
++.|++.+ +.++++.-..++|..|+...+... .. .+.. .....+..+.| .|+++++++..
T Consensus 17 ~~~wd~~~-----g~~~vs~l~~g~V~~~~~~~~~~~-~~--~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 17 DTIYDRTR-----QVFYQSNLYKGRIEVYNPKTQSHF-NV--VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CEEEETTT-----TEEEEEETTTTEEEEECTTTCCEE-EE--CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred CccCcCCC-----CEEEEEeccCCEEEEEcCCCCeEE-EE--ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 67888764 345555558999999998754321 11 1111 00124578899 68888887543
Q ss_pred ---------CCCcEEEEEcc---CCceeeeEeecccc-----------CCeeEEEECCCCcEEEEeeCC-CcEEEEecCC
Q 018675 94 ---------FDATTCIWEDV---GGDYECVATLEGHE-----------NEVKSVSWNASGTLLATCGRD-KSVWIWEVMP 149 (352)
Q Consensus 94 ---------~d~~i~i~~~~---~~~~~~~~~~~~h~-----------~~v~~v~~~~~~~~l~s~~~d-~~v~vwd~~~ 149 (352)
.+..+..||.. +++......+.... .....+...++|+..++++.- +.|...+..
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd- 167 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD- 167 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-
Confidence 25678888877 45433333332211 247789999999999988877 765544432
Q ss_pred CCeeEEEEEee---cCccCeeEEEEcCCCCEEEEEeCCCcEEEEecC
Q 018675 150 GNEFECVSVLQ---GHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 193 (352)
Q Consensus 150 ~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~ 193 (352)
+........-. ......+.+.++|++..|++....+.+..+|+.
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 22221111101 111235689999999988888779999999876
No 265
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.95 E-value=0.17 Score=44.05 Aligned_cols=271 Identities=8% Similarity=0.052 Sum_probs=133.2
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecc--e--ecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEM--H--TRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE 115 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~--h--~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~ 115 (352)
..++.++.++.|..+|..+++..|......... + ...+.+ ....++..+..++.++.+..+|..+++.. . ...
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~-W-~~~ 130 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVA-W-QTK 130 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEE-E-EEE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEE-E-EEe
Confidence 567777889999999999888777643211000 0 112221 12224566777888999999998777532 1 222
Q ss_pred cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCe-----eEEEEcCCCCEEEEEeCCCcEEEE
Q 018675 116 GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDV-----KMVQWHPTMDVLFSCSYDNTIKVW 190 (352)
Q Consensus 116 ~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~~~d~~i~iw 190 (352)
........... .+..++.++.++.+..+|...++.. .......... ..... .+..++.+..++.+..+
T Consensus 131 ~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~---W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 131 VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVK---WTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAV 203 (376)
T ss_dssp CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEE---EEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEE
T ss_pred CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEE---EEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEE
Confidence 11111111111 1346777888999999998766532 2222111100 11111 13467778888889988
Q ss_pred ecCCCCCCCceeEeeeeccCCCCc--ccEEEEEEcC--CCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecc
Q 018675 191 WAEDTDSDNWHCVQTISESNNGHS--STIWALSFNA--KGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGY 266 (352)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~h~--~~i~~l~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 266 (352)
+..... ..|.. .... ..+.. ..+..+...| .+..+..++.++.+..+|.+..+. .|...
T Consensus 204 d~~tG~-~~w~~--~~~~-~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~-------~w~~~------ 266 (376)
T 3q7m_A 204 LMEQGQ-MIWQQ--RISQ-ATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI-------MWKRE------ 266 (376)
T ss_dssp ETTTCC-EEEEE--ECCC------------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE-------EEEEC------
T ss_pred ECCCCc-EEEEE--eccc-CCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE-------Eeecc------
Confidence 765432 11111 1100 00000 0000000111 245677777889999998653221 12211
Q ss_pred cCcceEEEEecCCceEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEE
Q 018675 267 HDRTIFSVHWSREGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 346 (352)
Q Consensus 267 ~~~~i~~~~~~~~~~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw 346 (352)
......+.. .++.+..++.++.+..++....... -.........+...... ++ . |..++.+|.|.++
T Consensus 267 -~~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~~~--------w~~~~~~~~~~~~~~~~-~~-~-l~v~~~~g~l~~~ 333 (376)
T 3q7m_A 267 -LGSVNDFIV-DGNRIYLVDQNDRVMALTIDGGVTL--------WTQSDLLHRLLTSPVLY-NG-N-LVVGDSEGYLHWI 333 (376)
T ss_dssp -CCCEEEEEE-ETTEEEEEETTCCEEEEETTTCCEE--------EEECTTTTSCCCCCEEE-TT-E-EEEECTTSEEEEE
T ss_pred -CCCCCCceE-ECCEEEEEcCCCeEEEEECCCCcEE--------EeecccCCCcccCCEEE-CC-E-EEEEeCCCeEEEE
Confidence 111222222 2456666667778877765432211 01110111122222332 23 3 4457778888888
Q ss_pred eecc
Q 018675 347 ELAN 350 (352)
Q Consensus 347 ~~~~ 350 (352)
|..+
T Consensus 334 d~~t 337 (376)
T 3q7m_A 334 NVED 337 (376)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 8654
No 266
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.90 E-value=0.15 Score=43.50 Aligned_cols=161 Identities=9% Similarity=0.127 Sum_probs=97.7
Q ss_pred EEEEECCCC-CEEEEEeCCCcEEEEEccCCceeeeEeecc----ccC--CeeEEEE---CCCCcEEEEee----------
Q 018675 78 RSCAWSPSG-KLLATASFDATTCIWEDVGGDYECVATLEG----HEN--EVKSVSW---NASGTLLATCG---------- 137 (352)
Q Consensus 78 ~~~~~s~~~-~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~----h~~--~v~~v~~---~~~~~~l~s~~---------- 137 (352)
.+++|.+.. +++++.-..++|..|+...+....+ .+.+ .+. .+..+.| .|++.++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 456787744 4555555789999998764443333 3332 111 3578999 68877776543
Q ss_pred ---CCCcEEEEecC---CCCeeEEEEEeecCc-----------cCeeEEEEcCCCCEEEEEeCC-CcEEEEecCCCCCCC
Q 018675 138 ---RDKSVWIWEVM---PGNEFECVSVLQGHA-----------QDVKMVQWHPTMDVLFSCSYD-NTIKVWWAEDTDSDN 199 (352)
Q Consensus 138 ---~d~~v~vwd~~---~~~~~~~~~~~~~h~-----------~~v~~~~~~~~~~~l~s~~~d-~~i~iw~~~~~~~~~ 199 (352)
.+..|..+|+. .++.... ..+.... .....++..++++..++++.- +.|...+.....
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~--- 170 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT--- 170 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC---
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE---
Confidence 26778899987 4443222 1222111 236788899999988888877 776555332211
Q ss_pred ceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 200 WHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 200 ~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
.... -+...........+.+.++|+|..|+.....|.+..+|++
T Consensus 171 ~~~~-~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 171 VSTF-AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEE-EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred Eeee-eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 1100 0111111122346689999999988887779999999876
No 267
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.75 E-value=0.27 Score=43.43 Aligned_cols=118 Identities=19% Similarity=0.209 Sum_probs=76.2
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecCCCC----------eeEEEEEeec------CccCeeEEEEcCC---CCEEEE
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGN----------EFECVSVLQG------HAQDVKMVQWHPT---MDVLFS 180 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~----------~~~~~~~~~~------h~~~v~~~~~~~~---~~~l~s 180 (352)
.|..+..+|+|++|+..+. ..|.|-.++.+. ..++ ..+.- ...+|..+.|||- +..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~-~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQI-FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEE-EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccce-eEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 5778999999999887755 578888876221 0111 22221 2457999999995 568999
Q ss_pred EeCCCcEEEEecCCCCCCCceeEeeee--ccCCCCcccEEEEEEcCCCCEEEE--EeCCCcEEE
Q 018675 181 CSYDNTIKVWWAEDTDSDNWHCVQTIS--ESNNGHSSTIWALSFNAKGDKLVS--CSDDLTIKI 240 (352)
Q Consensus 181 ~~~d~~i~iw~~~~~~~~~~~~~~~~~--~~~~~h~~~i~~l~~~~~~~~l~s--~~~dg~i~i 240 (352)
-..|+.|++|++........ .+.... .........|.+++|.+++-.|-. .+.+|.|.-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999876322221 111000 011233467899999998765555 447776643
No 268
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.71 E-value=0.19 Score=41.30 Aligned_cols=196 Identities=7% Similarity=-0.021 Sum_probs=112.0
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTCIW 101 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~i~ 101 (352)
...+++|.|.. +.++++-...+.|..++...... ...... .-.....++++|++. +.++-...+.|.++
T Consensus 37 ~~~gi~~d~~~-----~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~ 106 (267)
T 1npe_A 37 VIIGLAFDCVD-----KVVYWTDISEPSIGRASLHGGEP----TTIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVA 106 (267)
T ss_dssp EEEEEEEETTT-----TEEEEEETTTTEEEEEESSSCCC----EEEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEEEecCC-----CEEEEEECCCCEEEEEecCCCCc----EEEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEE
Confidence 45688888853 35666666778999998865431 111111 113568899999755 45555566788888
Q ss_pred EccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC---CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEE
Q 018675 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR---DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178 (352)
Q Consensus 102 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 178 (352)
+..+.....+ ..........++++|++..|+.+.. .+.|..+++.. .....+. .........++++|++..|
T Consensus 107 ~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~--~~~~~~P~gia~d~~~~~l 181 (267)
T 1npe_A 107 KMDGTQRRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILA--QDNLGLPNGLTFDAFSSQL 181 (267)
T ss_dssp ETTSCSCEEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEE--CTTCSCEEEEEEETTTTEE
T ss_pred EcCCCCEEEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEE--ECCCCCCcEEEEcCCCCEE
Confidence 8654322211 1211245789999996555444443 36777777643 2222211 1222346788999987665
Q ss_pred EE-EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCC
Q 018675 179 FS-CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 179 ~s-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~ 244 (352)
+. -...+.|..++..... ...+.. + ......++.. .+..+++....+.|..+|.+
T Consensus 182 yv~d~~~~~I~~~~~~g~~------~~~~~~---~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 182 CWVDAGTHRAECLNPAQPG------RRKVLE---G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEEETTTTEEEEEETTEEE------EEEEEE---C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCEEEEEecCCCc------eEEEec---C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 54 4456788888764311 111111 1 1223466654 34455555567889888764
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.40 E-value=0.49 Score=42.26 Aligned_cols=206 Identities=10% Similarity=0.105 Sum_probs=109.3
Q ss_pred ceEEEEEccC-CCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC---Cc-
Q 018675 23 RVWSLAWKPT-AGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD---AT- 97 (352)
Q Consensus 23 ~V~~i~~~p~-~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~- 97 (352)
.-.+++|.|+ .. +.++++ ...+.|+.++..++... .... .......++|+++|+++++.... ..
T Consensus 140 ~P~gvavd~~s~~----g~Lyv~-D~~~~I~~id~~~g~v~----~~~~--~~~~P~giavd~dG~lyVad~~~~~~~~g 208 (433)
T 4hw6_A 140 NIWRMMFDPNSNY----DDLYWV-GQRDAFRHVDFVNQYVD----IKTT--NIGQCADVNFTLNGDMVVVDDQSSDTNTG 208 (433)
T ss_dssp CCCEEEECTTTTT----CEEEEE-CBTSCEEEEETTTTEEE----EECC--CCSCEEEEEECTTCCEEEEECCSCTTSEE
T ss_pred CCceEEEccccCC----CEEEEE-eCCCCEEEEECCCCEEE----Eeec--CCCCccEEEECCCCCEEEEcCCCCcccce
Confidence 4457888873 11 234444 33378888887654321 1111 22357899999999955554322 12
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
+...+.. +.......+. .-.....+++.| ++.++++-..++.|..+|...+.....+... +....-..++++|++.
T Consensus 209 v~~~~~~-~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 209 IYLFTRA-SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNFHIVWHPTGD 285 (433)
T ss_dssp EEEECGG-GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCEEEEECTTSS
T ss_pred EEEEECC-CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcccEEEeCCCC
Confidence 2222222 1111011111 223456788899 7777766667788888886534321222111 1112223689999998
Q ss_pred EEE-EEeCCCcEEEEecCCCCCCCceeEeeeecc--C---------CCCcccEEEEEE---------cCCCCEEEEEeCC
Q 018675 177 VLF-SCSYDNTIKVWWAEDTDSDNWHCVQTISES--N---------NGHSSTIWALSF---------NAKGDKLVSCSDD 235 (352)
Q Consensus 177 ~l~-s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~--~---------~~h~~~i~~l~~---------~~~~~~l~s~~~d 235 (352)
.|+ +-...+.|..++..... ..+.....+... . .+.-.....+++ .+++.++++-...
T Consensus 286 ~LYvad~~~~~I~~~~~d~~~-~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n 364 (433)
T 4hw6_A 286 WAYIIYNGKHCIYRVDYNRET-GKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS 364 (433)
T ss_dssp EEEEEETTTTEEEEEEBCTTT-CCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT
T ss_pred EEEEEeCCCCEEEEEeCCCCC-cccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC
Confidence 554 44456778887653211 101000011000 0 011234667888 7788888877778
Q ss_pred CcEEEEcC
Q 018675 236 LTIKIWGA 243 (352)
Q Consensus 236 g~i~iwd~ 243 (352)
++|+.++.
T Consensus 365 ~~I~~~~~ 372 (433)
T 4hw6_A 365 HTVRVLTP 372 (433)
T ss_dssp TEEEEECT
T ss_pred CEEEEECC
Confidence 88998874
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.13 E-value=1.1 Score=43.43 Aligned_cols=247 Identities=8% Similarity=0.082 Sum_probs=131.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec-----cccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC
Q 018675 75 RTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE-----GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 75 ~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~-----~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~ 149 (352)
..|.++...++|.+.+ |..+ .+.+|+..++......... -....|.++...++|.+.+ |+..+-|.+++...
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEE-EESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCCCCeEEECCCC
Confidence 4688998888888665 4444 6888886655433221111 1235688998888887655 44434577888654
Q ss_pred CCeeEEEEE--------e----ecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeee---ccCCCCc
Q 018675 150 GNEFECVSV--------L----QGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS---ESNNGHS 214 (352)
Q Consensus 150 ~~~~~~~~~--------~----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~---~~~~~h~ 214 (352)
... ..... . .-....|.++...+++. |..|+.++-|..++.... .+....... .......
T Consensus 288 ~~~-~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~---~~~~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 288 NQF-LLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPP---TFHTWSYSPTQMNESSLSN 362 (781)
T ss_dssp C----------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCC---SCEEEC----CCCSSCCSS
T ss_pred Cee-eeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCC---cceeeccCccccccCCCCC
Confidence 321 11111 0 01234577777777765 567777777888854322 121111000 0111123
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCceEEecCCCCeEEEE
Q 018675 215 STIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGIIASGAADDSVQFF 294 (352)
Q Consensus 215 ~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~ 294 (352)
..|.++...++|.+.+ |+.++-|..++.......... .........|.++..++++.+-.|..++.+..+
T Consensus 363 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~---------~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~ 432 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWI-GTDGGGINVFENGKRVAIYNK---------ENRELLSNSVLCSLKDSEGNLWFGTYLGNISYY 432 (781)
T ss_dssp SCEEEEEECTTSCEEE-EEBSSCEEEEETTEEEEECC--------------CCCSBEEEEEECTTSCEEEEETTEEEEEE
T ss_pred cceEEEEEcCCCCEEE-EeCCCcEEEEECCCCeEEEcc---------CCCCCCCcceEEEEECCCCCEEEEeccCCEEEE
Confidence 5799999998888665 454555777875432111000 000123456788887777766666666666666
Q ss_pred EccCCccccCcccceeeecccccCcceeEEEecCCCcceEEEecCCCeEEEEeec
Q 018675 295 VESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
+...... ... .........|.++...+++. +.+ |... -|.+++..
T Consensus 433 ~~~~~~~------~~~-~~~~~~~~~v~~i~~d~~g~-lwi-gt~~-Gl~~~~~~ 477 (781)
T 3v9f_A 433 NTRLKKF------QII-ELEKNELLDVRVFYEDKNKK-IWI-GTHA-GVFVIDLA 477 (781)
T ss_dssp CSSSCEE------EEC-CSTTTCCCCEEEEEECTTSE-EEE-EETT-EEEEEESS
T ss_pred cCCCCcE------EEe-ccCCCCCCeEEEEEECCCCC-EEE-EECC-ceEEEeCC
Confidence 4322111 000 00011345788998887775 443 3334 46667654
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.09 E-value=0.72 Score=41.13 Aligned_cols=156 Identities=11% Similarity=0.116 Sum_probs=87.3
Q ss_pred ceEEEEEcc-CCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC-CC---c
Q 018675 23 RVWSLAWKP-TAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF-DA---T 97 (352)
Q Consensus 23 ~V~~i~~~p-~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d~---~ 97 (352)
.-.+++++| .+ ..|..+...+.|+.++...... ..... .......++|+++|+.|..+.. ++ .
T Consensus 138 ~P~~lavdp~~~------g~Lyv~d~~~~I~~id~~~~~v----~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~ 205 (430)
T 3tc9_A 138 GAVWLSFDPKNH------NHLYLVGEQHPTRLIDFEKEYV----STVYS--GLSKVRTICWTHEADSMIITNDQNNNDRP 205 (430)
T ss_dssp CCCEEEEETTEE------EEEEEEEBTEEEEEEETTTTEE----EEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSE
T ss_pred CCCEEEECCCCC------CeEEEEeCCCcEEEEECCCCEE----EEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccc
Confidence 345777876 32 2344444447888888765431 11111 2245788999999995555543 22 1
Q ss_pred EEEEEccCCceeeeEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 98 TCIWEDVGGDYECVATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 98 i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
..+|....+.......+.. ......++++| ++.++++-..++.|..++.... ....+.... ....-..++++|+++
T Consensus 206 ~v~~~~~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~-~~~~~~~~~-~~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 206 NNYILTRESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ-ETTPLFTIQ-DSGWEFHIQFHPSGN 282 (430)
T ss_dssp EEEEEEGGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT-EEEEEEECS-SSSCCEEEEECTTSS
T ss_pred eEEEEeCCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC-cEEEEEEcC-CCCcceeEEEcCCCC
Confidence 2233333332221122221 23467888999 7777777667788888887533 221122111 112356899999999
Q ss_pred EE-EEEeCCCcEEEEecC
Q 018675 177 VL-FSCSYDNTIKVWWAE 193 (352)
Q Consensus 177 ~l-~s~~~d~~i~iw~~~ 193 (352)
.| ++-...+.|..++..
T Consensus 283 ~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 283 YAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCEEEEEeCC
Confidence 54 444556778887643
No 272
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.03 E-value=0.73 Score=40.70 Aligned_cols=125 Identities=19% Similarity=0.164 Sum_probs=74.4
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC--------cee-EeeeeccCCCCcccEEEEEEcCC---CCEEEEE
Q 018675 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDN--------WHC-VQTISESNNGHSSTIWALSFNAK---GDKLVSC 232 (352)
Q Consensus 165 ~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~--------~~~-~~~~~~~~~~h~~~i~~l~~~~~---~~~l~s~ 232 (352)
.+..+..+|+|.+|+..+ +..|.|-.+....... .++ ...+.........+|..+.|||- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999888775 5578888766321111 111 11111111113578999999995 5679999
Q ss_pred eCCCcEEEEcCCccccccCCCCccce-eeEEee-cccCcceEEEEecCCc---eEEecCCCCeEEEE
Q 018675 233 SDDLTIKIWGADITRMQSGDGYASWR-HLCTIS-GYHDRTIFSVHWSREG---IIASGAADDSVQFF 294 (352)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~i~~~~~~~~~---~~~s~~~d~~v~~~ 294 (352)
..|+.||+||+.... ..+. ..+ ....+. ......+.+++|..++ ++++....|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~---~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQ---EKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTT---SCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCC---CCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999999999986411 0000 000 000111 1123568889999877 45556678887754
No 273
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.67 E-value=1.2 Score=40.39 Aligned_cols=162 Identities=10% Similarity=0.090 Sum_probs=88.1
Q ss_pred eEEEEECCC--CCEEEEEeCCCcEEEEEccCCceeeeEeec-cccCCeeEEEE-------CCCCcEEEEeeCCC------
Q 018675 77 VRSCAWSPS--GKLLATASFDATTCIWEDVGGDYECVATLE-GHENEVKSVSW-------NASGTLLATCGRDK------ 140 (352)
Q Consensus 77 v~~~~~s~~--~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~-~h~~~v~~v~~-------~~~~~~l~s~~~d~------ 140 (352)
...++|+|. ++++++....+.|++.|..++....+.... ........++| ++++..|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 457889983 445555444456777776665433322221 11235789999 99998666665543
Q ss_pred -cEEEEecCCCCee------EEEEEeecCccCeeEEEEcCC-CCEEEEEeCCCcEEEEecC-------CCCC-C---Cce
Q 018675 141 -SVWIWEVMPGNEF------ECVSVLQGHAQDVKMVQWHPT-MDVLFSCSYDNTIKVWWAE-------DTDS-D---NWH 201 (352)
Q Consensus 141 -~v~vwd~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~iw~~~-------~~~~-~---~~~ 201 (352)
.|.+.+......+ ..+..+ .....++.+|+ +.++++-..++.|..+++. .... . ...
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred ceEEEEecCCCCceeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 2555543321111 122222 13356778995 4555566677788888765 2111 0 000
Q ss_pred --eEeeeeccCCCCcccEEEEEEcCCCCE-EEEEeCCCcEEEEcCC
Q 018675 202 --CVQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGAD 244 (352)
Q Consensus 202 --~~~~~~~~~~~h~~~i~~l~~~~~~~~-l~s~~~dg~i~iwd~~ 244 (352)
....+... +.......|+|+|+|++ +++=...++|+.++.+
T Consensus 297 ~g~~~~l~~~--~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 297 PNTFKQLFTI--ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEEC--SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccceeEec--CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 00111111 12234578999999994 5555567788886643
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.42 E-value=1.4 Score=39.37 Aligned_cols=256 Identities=9% Similarity=0.101 Sum_probs=124.5
Q ss_pred eEEEEECCC---CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC---Cc-EEEEecCC
Q 018675 77 VRSCAWSPS---GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD---KS-VWIWEVMP 149 (352)
Q Consensus 77 v~~~~~s~~---~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~-v~vwd~~~ 149 (352)
...++|+|+ +.+.+ +...+.|+.++..++... .+.........++++++++++++.... .. +...+..
T Consensus 141 P~gvavd~~s~~g~Lyv-~D~~~~I~~id~~~g~v~---~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~- 215 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYW-VGQRDAFRHVDFVNQYVD---IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA- 215 (433)
T ss_dssp CCEEEECTTTTTCEEEE-ECBTSCEEEEETTTTEEE---EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG-
T ss_pred CceEEEccccCCCEEEE-EeCCCCEEEEECCCCEEE---EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC-
Confidence 467899984 45444 433378888887555432 232334568899999999955554321 12 2222221
Q ss_pred CCeeEEEEEeecCccCeeEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC-
Q 018675 150 GNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD- 227 (352)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~- 227 (352)
+..... ..+. .......++++| ++.+.++-..++.|..++.... .. ...+... +....-..|+|+|+++
T Consensus 216 ~~~~~~-~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g---~~--~~~~~~~--~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 216 SGFTER-LSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG---TL--TEEEVMM--DTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp GTTCCE-EEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC---CE--EEEEEEC--SCCSSCEEEEECTTSSE
T ss_pred CCeecc-cccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC---eE--EEEEecc--CCCCCcccEEEeCCCCE
Confidence 111100 1111 122345677888 6665555556677888864321 11 0111111 1112234699999998
Q ss_pred EEEEEeCCCcEEEEcCCcc--ccc------cCCCCccceeeEEeecccCcceEEEEe---------cCCc-eEEecCCCC
Q 018675 228 KLVSCSDDLTIKIWGADIT--RMQ------SGDGYASWRHLCTISGYHDRTIFSVHW---------SREG-IIASGAADD 289 (352)
Q Consensus 228 ~l~s~~~dg~i~iwd~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~-~~~s~~~d~ 289 (352)
++++-...++|+.++.+.. .+. ...+...+.. .......-.....+++ ++++ ++++-..+.
T Consensus 287 LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~d-g~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~ 365 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVD-GMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH 365 (433)
T ss_dssp EEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBC-EEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT
T ss_pred EEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCC-CcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC
Confidence 5555566788988875421 110 0000000000 0000001123455666 5554 444545556
Q ss_pred eEEEEEccCCcccc--Cc-c---cceee--ecccccCcceeEEEec-CCCcceEEEecCCCeEEEEeec
Q 018675 290 SVQFFVESKDDLID--GP-S---YKMLL--KKEKAHDMDVNSVQWS-PGERRLLASASDDGMIKIWELA 349 (352)
Q Consensus 290 ~v~~~~~~~~~~~~--~~-~---~~~~~--~~~~~h~~~i~~~~~s-p~~~~~l~s~~~Dg~i~iw~~~ 349 (352)
.|+.+.... .+.. +. . ....- ......-..-..|++. +++ .++++-...+.|+.++++
T Consensus 366 ~I~~~~~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g-~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 366 TVRVLTPEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRK-CFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEECTTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTT-EEEEEEGGGTEEEEEEEC
T ss_pred EEEEECCCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCC-EEEEEeCCCCEEEEEecC
Confidence 676664321 1100 00 0 00000 0000111236789999 555 578888788899988865
No 275
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.25 E-value=2.1 Score=40.55 Aligned_cols=146 Identities=11% Similarity=0.064 Sum_probs=82.6
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeee----cceecceEEEEECCCCCEEEEEeC------CCcEEEEEccCCcee
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLE----EMHTRTVRSCAWSPSGKLLATASF------DATTCIWEDVGGDYE 109 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~----~~h~~~v~~~~~s~~~~~l~s~~~------d~~i~i~~~~~~~~~ 109 (352)
..++.++.|+.|..+|..+++..|+....-. .....++ + .++. ++.+.. ++.+..+|..+++..
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~--v---~~~~-v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR--V---VKGK-VIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE--E---ETTE-EEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE--E---ECCE-EEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 4677778899999999999988887543100 0001111 1 1344 443332 578999988777532
Q ss_pred eeEee-ccc----------------------------cCCeeEEEECCCCcEEEEeeCCC-------------------c
Q 018675 110 CVATL-EGH----------------------------ENEVKSVSWNASGTLLATCGRDK-------------------S 141 (352)
Q Consensus 110 ~~~~~-~~h----------------------------~~~v~~v~~~~~~~~l~s~~~d~-------------------~ 141 (352)
=.... .+. ......+++.+...+++.++.++ +
T Consensus 192 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~ 271 (668)
T 1kv9_A 192 WRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSS 271 (668)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 11111 000 01112467778777887777665 3
Q ss_pred EEEEecCCCCeeEEEEEeec--Cc-------cCeeEEEEcCCCC---EEEEEeCCCcEEEEecCC
Q 018675 142 VWIWEVMPGNEFECVSVLQG--HA-------QDVKMVQWHPTMD---VLFSCSYDNTIKVWWAED 194 (352)
Q Consensus 142 v~vwd~~~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~~~d~~i~iw~~~~ 194 (352)
|..+|...++. +..++. |. .+.....+..+++ .++.++.+|.+.++|...
T Consensus 272 v~AlD~~tG~~---~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 272 ILAIRPDTGKL---AWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN 333 (668)
T ss_dssp EEEECTTTCCE---EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred EEEEcCCCCce---eeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC
Confidence 88889877653 222221 21 1222223333554 578888999999987654
No 276
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.21 E-value=1.4 Score=38.11 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=59.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec---cccCCeeEEEECCC----CcEEEEeeCC-----CcEE
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE---GHENEVKSVSWNAS----GTLLATCGRD-----KSVW 143 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~---~h~~~v~~v~~~~~----~~~l~s~~~d-----~~v~ 143 (352)
.-..++|.|+|+++++ ..++.|.+++ .++...+..+. .-......++|+|+ +.+.++-... ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 3568899999996665 5668898887 34333333221 12346789999998 4444444432 5677
Q ss_pred EEecCCCCe--eEE-EEEee---cCccCeeEEEEcCCCCEEEEEe
Q 018675 144 IWEVMPGNE--FEC-VSVLQ---GHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 144 vwd~~~~~~--~~~-~~~~~---~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
.++...... .+. +..+. +.......+.|.|++.+.++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 777653211 111 12122 1112235789999997666543
No 277
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.16 E-value=0.96 Score=36.12 Aligned_cols=153 Identities=15% Similarity=0.148 Sum_probs=77.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceee----eEee--ccccCCeeEEEECCCCcEEEEeeCCCcEEEEecCC
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYEC----VATL--EGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMP 149 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~----~~~~--~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~ 149 (352)
.+..++|+|+|.+.++ .++.+.-.+..+..... ...+ .+.+. -.++.|.|+|.+.++ .|+.|.-++-..
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 6779999999998777 55654333322211000 0111 01112 478899999988776 558776665422
Q ss_pred CCeeEE----EEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 150 GNEFEC----VSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 150 ~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
...... ...-..--..+..|.+.|++.+.+.. |+.+.-..........|....+......-| .-.-+.|.|+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~--~yr~l~f~~~ 192 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWD--TFKFLFFSSV 192 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGG--GEEEEEECTT
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcc--eEEEEEECCC
Confidence 211000 01111122467899999999876655 777533322211212221111111111112 2333668888
Q ss_pred CCEEEEEeCCCcEEEE
Q 018675 226 GDKLVSCSDDLTIKIW 241 (352)
Q Consensus 226 ~~~l~s~~~dg~i~iw 241 (352)
+.+++.. +| ++|
T Consensus 193 G~l~~v~--~g--~~Y 204 (236)
T 1tl2_A 193 GTLFGVQ--GG--KFY 204 (236)
T ss_dssp SCEEEEE--TT--EEE
T ss_pred CcEEEEe--CC--eEE
Confidence 8877665 66 445
No 278
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.09 E-value=1.8 Score=38.86 Aligned_cols=108 Identities=7% Similarity=0.086 Sum_probs=60.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecc------ccCCeeEEEECCC----CcEEEEeeC-------
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEG------HENEVKSVSWNAS----GTLLATCGR------- 138 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~------h~~~v~~v~~~~~----~~~l~s~~~------- 138 (352)
....++|.|+|+++++-...+.|.+++..++....+..+.. ..+....++|+|+ +.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 34689999999988765444468777654444443333321 2456779999994 444444332
Q ss_pred -----CCcEEEEecCCCC-e---eEEEE-Eee-cCccCeeEEEEcCCCCEEEEEeC
Q 018675 139 -----DKSVWIWEVMPGN-E---FECVS-VLQ-GHAQDVKMVQWHPTMDVLFSCSY 183 (352)
Q Consensus 139 -----d~~v~vwd~~~~~-~---~~~~~-~~~-~h~~~v~~~~~~~~~~~l~s~~~ 183 (352)
...|.-++..... . .+.+. .+. ........+.|.|++.+.++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1244445443221 1 11111 121 11224678999999987776553
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.99 E-value=1.6 Score=37.64 Aligned_cols=195 Identities=9% Similarity=-0.055 Sum_probs=106.2
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEEEEeCCCcEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLATASFDATTCIW 101 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~i~ 101 (352)
...+++|.|.+ +.++.+-...+.|..++...... ..... ........+++.+.+ .+.++-...+.|.+.
T Consensus 74 ~~~~l~~d~~~-----~~ly~~D~~~~~I~r~~~~g~~~----~~~~~-~~~~~p~glavd~~~g~ly~~d~~~~~I~~~ 143 (349)
T 3v64_C 74 NAIALDFHHRR-----ELVFWSDVTLDRILRANLNGSNV----EEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVA 143 (349)
T ss_dssp CEEEEEEETTT-----TEEEEEETTTTEEEEEETTSCSC----EEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccc-----cEEEEEeccCCceEEEecCCCCc----eEEEe-CCCCCccEEEEecCCCeEEEEcCCCCeEEEE
Confidence 45678888753 34555555667788787765421 11111 111234678888754 555666667788888
Q ss_pred EccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCC-CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 102 EDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRD-KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 102 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d-~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
+..+.... ..+...-...+.+++.|.+. ++++-... +.|...++.... ... ...........++++|++..|.
T Consensus 144 ~~dG~~~~--~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~--~~~~~~~~PnGla~d~~~~~lY 218 (349)
T 3v64_C 144 NLDGAHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRI--IADTHLFWPNGLTIDYAGRRMY 218 (349)
T ss_dssp ETTSCSCE--EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEE--SCCSSCSCEEEEEEETTTTEEE
T ss_pred cCCCCceE--EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEE--EEECCCCCcceEEEeCCCCEEE
Confidence 76543221 12222335678999998554 44444444 667777764321 111 1111223457899998766555
Q ss_pred EE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 180 SC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 180 s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
.+ +..+.|..++...... ..+... .......|++. .+..+++-...+.|..++
T Consensus 219 ~aD~~~~~I~~~~~dG~~~------~~~~~~---~~~~P~giav~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 219 WVDAKHHVIERANLDGSHR------KAVISQ---GLPHPFAITVF-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EEETTTTEEEEEETTSCSC------EEEECS---SCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EEECCCCEEEEEeCCCCce------EEEEeC---CCCCceEEEEE-CCEEEEecCCCCeEEEEE
Confidence 44 4566788887643211 111111 12345567773 445555655666776665
No 280
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.97 E-value=1.6 Score=37.61 Aligned_cols=197 Identities=12% Similarity=0.067 Sum_probs=108.2
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATT 98 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i 98 (352)
+.+..+|.+..+. ++|+- +....|+..++..... ..... .......++|++... +..+-...+.|
T Consensus 32 ~~d~~~C~~~~~~-------~~ll~-~~~~~I~~i~~~g~~~----~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I 97 (349)
T 3v64_C 32 RPDRRSCKALGPE-------PVLLF-ANRIDIRQVLPHRSEY----TLLLN--NLENAIALDFHHRRELVFWSDVTLDRI 97 (349)
T ss_dssp CTTSSCEEESSSC-------CEEEE-ECBSCEEEECTTSCCE----EEEEC--SCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCCcccccccC-------ceeEe-ecccceEEEeCCCCee----EEeec--CCCceEEEEEeccccEEEEEeccCCce
Confidence 3455566654442 23332 2445677777654321 11111 123468899997555 44555566788
Q ss_pred EEEEccCCceeeeEeeccccCCeeEEEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSVSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
..++..+.....+ +.........+++.+. +.+.++-...+.|.+.++.... ... ...........+++.|.+..
T Consensus 98 ~r~~~~g~~~~~~--~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~--l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 98 LRANLNGSNVEEV--VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKV--LLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp EEEETTSCSCEEE--ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEE--EECTTCSCEEEEEEETTTTE
T ss_pred EEEecCCCCceEE--EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEE--EEeCCCCCcceEEEecCcCe
Confidence 8887665432222 2222234567888874 4555666667788888875322 111 12223345678899986555
Q ss_pred EE-EEeCC-CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE-EEEeCCCcEEEEcCC
Q 018675 178 LF-SCSYD-NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL-VSCSDDLTIKIWGAD 244 (352)
Q Consensus 178 l~-s~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l-~s~~~dg~i~iwd~~ 244 (352)
|+ +-... +.|...++..... ..+.. ......+.|+++|++..| ++-...++|..++++
T Consensus 173 ly~td~~~~~~I~r~~~dG~~~------~~~~~---~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 173 IYWTDWGNTPRIEASSMDGSGR------RIIAD---THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp EEEEECSSSCEEEEEETTSCSC------EESCC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeccCCCCEEEEEeCCCCCc------EEEEE---CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 54 44444 6677766543211 11111 112456789999865544 455556788888765
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.80 E-value=2 Score=37.85 Aligned_cols=186 Identities=8% Similarity=-0.012 Sum_probs=103.3
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCE-EEEEeCCCcEEEEEccCCc--eeeeEeecc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL-LATASFDATTCIWEDVGGD--YECVATLEG 116 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~d~~i~i~~~~~~~--~~~~~~~~~ 116 (352)
++|+-+ ....|+..++...... ..+ .....+..++|++.+.. ..+-...+.|..++..+.. ......+..
T Consensus 84 ~~ll~~-~~~~I~~i~l~~~~~~----~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 84 AYLFFT-NRHEVRKMTLDRSEYT----SLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp CEEEEE-ETTEEEEECTTSCSCE----EEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS
T ss_pred ceeEEe-ccceeEEEccCCccee----Eec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC
Confidence 344443 4578888887654321 111 12346789999986554 4554556778777654311 011122222
Q ss_pred ccCCeeEEEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe-C-CCcEEEEecC
Q 018675 117 HENEVKSVSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-Y-DNTIKVWWAE 193 (352)
Q Consensus 117 h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~-d~~i~iw~~~ 193 (352)
.......+++.+ .+++.++-...+.|.+.++.... .. ..+.........+++.|.+..|+.+. . .+.|...++.
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-~~--~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS-EE--EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCc-eE--EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 334577888887 45556666667888888875332 11 12222334467889998666555444 2 3567777654
Q ss_pred CCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCC
Q 018675 194 DTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGAD 244 (352)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~ 244 (352)
.... ..+.. ......+.|++++++..|..+ ...+.|..+|++
T Consensus 234 G~~~------~~~~~---~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 234 GVDI------YSLVT---ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp SCSC------EEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcc------EEEEE---CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 3221 11111 112457889999876655544 456788888765
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.74 E-value=2 Score=37.61 Aligned_cols=196 Identities=9% Similarity=-0.059 Sum_probs=105.3
Q ss_pred cceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCC-CEEEEEeCCCcEEE
Q 018675 22 DRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSG-KLLATASFDATTCI 100 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~i 100 (352)
....+++|.+.. +.++.+-...+.|..++...... ...+. ........+++++.+ .+.++-...+.|.+
T Consensus 116 ~~~~gl~~d~~~-----~~ly~~D~~~~~I~r~~~~g~~~----~~~~~-~~~~~p~glavd~~~g~lY~~d~~~~~I~~ 185 (386)
T 3v65_B 116 ENAIALDFHHRR-----ELVFWSDVTLDRILRANLNGSNV----EEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEV 185 (386)
T ss_dssp SCEEEEEEETTT-----TEEEEEETTTTEEEEEETTSCCE----EEEEC-SSCSCCCCEEEETTTTEEEEEETTTTEEEE
T ss_pred CccEEEEEecCC-----CeEEEEeCCCCcEEEEecCCCCc----EEEEe-CCCCCccEEEEEeCCCeEEEEcCCCCeEEE
Confidence 345678888753 34555555667888887765421 11111 111234667888754 45555556677777
Q ss_pred EEccCCceeeeEeeccccCCeeEEEECCCCcEEEEe-eCC-CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEE
Q 018675 101 WEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC-GRD-KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVL 178 (352)
Q Consensus 101 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d-~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 178 (352)
.+..+.... ..+...-.....+++.|.+..|+.+ ... +.|...++.... ...+ ..........++++|++..|
T Consensus 186 ~~~dg~~~~--~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~--~~~~~~~PnGlavd~~~~~l 260 (386)
T 3v65_B 186 ANLDGAHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRII--ADTHLFWPNGLTIDYAGRRM 260 (386)
T ss_dssp CBTTSCSCE--EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEE--ECSSCSCEEEEEEEGGGTEE
T ss_pred EeCCCCceE--EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEE--EECCCCCeeeEEEeCCCCEE
Confidence 765443221 1222233567889999865554444 334 567777754322 1111 11222345789999866655
Q ss_pred EE-EeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 179 FS-CSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 179 ~s-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
+. -+..+.|..++...... ..+... .......|++ ..+..+++-...+.|..++
T Consensus 261 Y~aD~~~~~I~~~d~dG~~~------~~~~~~---~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 261 YWVDAKHHVIERANLDGSHR------KAVISQ---GLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEETTTTEEEEECTTSCSC------EEEECS---SCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCEEEEEeCCCCee------EEEEEC---CCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 54 44566788886543211 111111 1234556777 3445556666667777775
No 283
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.56 E-value=2.1 Score=37.02 Aligned_cols=133 Identities=13% Similarity=0.115 Sum_probs=71.3
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC---C------------CcEEEEEccCCceeeeE
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF---D------------ATTCIWEDVGGDYECVA 112 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d------------~~i~i~~~~~~~~~~~~ 112 (352)
+.++.+|+.+...........+....-...+.+.+.++|++.++... | ..-.+|....++..
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~--- 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVR--- 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCE---
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEE---
Confidence 56777877655432222222221111245789999999998887541 1 22344443333222
Q ss_pred eeccccCCeeEEEECCCCcEEEEe-eCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcC-CCCEEEEEeCC
Q 018675 113 TLEGHENEVKSVSWNASGTLLATC-GRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYD 184 (352)
Q Consensus 113 ~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d 184 (352)
.+...-...+.++|+|+++.|+.+ +..+.|..|++...........+. .....-.++..+ ++.+.+++..+
T Consensus 215 ~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 215 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESC
T ss_pred EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCC
Confidence 121223456899999999876655 456889999986433333223331 122234455666 36655544433
No 284
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.53 E-value=3 Score=38.71 Aligned_cols=104 Identities=16% Similarity=0.116 Sum_probs=57.8
Q ss_pred CCeEEEEecCCCceeeeeeeeeec--ce-----------------------------ec--ceEEEEECCCCCEEEEEeC
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEE--MH-----------------------------TR--TVRSCAWSPSGKLLATASF 94 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~--~h-----------------------------~~--~v~~~~~s~~~~~l~s~~~ 94 (352)
|+.|..+|..+++..|+....-.. .+ .. ....+++.++...+..+..
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 799999999999888875421100 00 00 0012455665555555543
Q ss_pred C----------------CcEEEEEccCCceeeeEeecccc--------CCeeEEEECCCCc---EEEEeeCCCcEEEEec
Q 018675 95 D----------------ATTCIWEDVGGDYECVATLEGHE--------NEVKSVSWNASGT---LLATCGRDKSVWIWEV 147 (352)
Q Consensus 95 d----------------~~i~i~~~~~~~~~~~~~~~~h~--------~~v~~v~~~~~~~---~l~s~~~d~~v~vwd~ 147 (352)
+ +.+..+|..+++..=......|. .++ -+....+|+ .++.++.++.+.+.|.
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~ 333 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNR 333 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEET
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEEC
Confidence 2 25778888777542112222221 111 122224663 5677888999999998
Q ss_pred CCCCe
Q 018675 148 MPGNE 152 (352)
Q Consensus 148 ~~~~~ 152 (352)
..++.
T Consensus 334 ~tG~~ 338 (571)
T 2ad6_A 334 ENGNL 338 (571)
T ss_dssp TTCCE
T ss_pred CCCCE
Confidence 76653
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.28 E-value=0.6 Score=44.61 Aligned_cols=180 Identities=8% Similarity=-0.000 Sum_probs=90.2
Q ss_pred CCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEE-eCCCcEEEEEccCCc--eeeeEeeccccCCeeE
Q 018675 47 GDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATA-SFDATTCIWEDVGGD--YECVATLEGHENEVKS 123 (352)
Q Consensus 47 ~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~d~~i~i~~~~~~~--~~~~~~~~~h~~~v~~ 123 (352)
..+.|+..++.+... ...+. ....+..++|++.+..|... ...+.|..++..+.. ......+.........
T Consensus 384 ~~~~I~~id~~~~~~----~~~~~--~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~g 457 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEY----TSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 457 (699)
T ss_dssp CTTC-CEECTTSCCE----ECCSC--CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCC
T ss_pred CccceEEEeCCCCcc----eeeec--cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcce
Confidence 345677666654321 11111 12345678898866555443 445778777765310 0111111111123456
Q ss_pred EEECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-C-CcEEEEecCCCCCCCc
Q 018675 124 VSWNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-D-NTIKVWWAEDTDSDNW 200 (352)
Q Consensus 124 v~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d-~~i~iw~~~~~~~~~~ 200 (352)
+++.+ .+.++++-...+.|.+.++.... .. ..+.........+++.|.+..|+.+.. . +.|...++.....
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--- 531 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVK-RK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--- 531 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCC-EE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC---
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCc-eE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe---
Confidence 77775 44555555667889888875332 11 112212234467788886554443332 2 5666554432211
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCC-CEEEEEeCCCcEEEEcCC
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKG-DKLVSCSDDLTIKIWGAD 244 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~-~~l~s~~~dg~i~iwd~~ 244 (352)
..+.. ......+.|+++|++ .++++-+..++|..++++
T Consensus 532 ---~~l~~---~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 532 ---YSLVT---ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp ---CEESC---SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred ---eEEEe---CCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 11110 111345578999874 455565667789988875
No 286
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.96 E-value=2.1 Score=36.97 Aligned_cols=105 Identities=9% Similarity=0.053 Sum_probs=55.4
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEEccCCcee-eeEee----ccccCCeeEEEECCC----CcEEEEeeC-------
Q 018675 76 TVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYE-CVATL----EGHENEVKSVSWNAS----GTLLATCGR------- 138 (352)
Q Consensus 76 ~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~~~~-~~~~~----~~h~~~v~~v~~~~~----~~~l~s~~~------- 138 (352)
....++|.|+|+ ++++ ...+.|.+++.. +... .+..+ .........++++|+ +.+.++-..
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 457889999999 6654 567888888743 2211 11111 112345688999995 444444332
Q ss_pred CCcEEEEecCCCC-e---eEEE-EEee---cCccCeeEEEEcCCCCEEEEEe
Q 018675 139 DKSVWIWEVMPGN-E---FECV-SVLQ---GHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 139 d~~v~vwd~~~~~-~---~~~~-~~~~---~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
...|..+++.... . .+.+ ..+. ........+.|.|++.+.++.+
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 2345555553221 1 1111 1111 0111235689999996555543
No 287
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.47 E-value=3.6 Score=35.90 Aligned_cols=217 Identities=9% Similarity=0.009 Sum_probs=115.8
Q ss_pred CCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEE
Q 018675 47 GDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125 (352)
Q Consensus 47 ~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~ 125 (352)
....|+..++..... ..... .......++|++.+. ++.+-...+.|..++..+.....+ +.........++
T Consensus 94 ~~~~I~~i~~~~~~~----~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--~~~~~~~p~gla 165 (386)
T 3v65_B 94 NRIDIRQVLPHRSEY----TLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--VSTGLESPGGLA 165 (386)
T ss_dssp CBSCEEEECTTSCCC----EEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE--ECSSCSCCCCEE
T ss_pred cCccceeeccCCCcE----EEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE--EeCCCCCccEEE
Confidence 456777777765321 11111 123578899997554 555555667888887665432222 222223456788
Q ss_pred ECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe-CC-CcEEEEecCCCCCCCcee
Q 018675 126 WNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS-YD-NTIKVWWAEDTDSDNWHC 202 (352)
Q Consensus 126 ~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d-~~i~iw~~~~~~~~~~~~ 202 (352)
+.+. +.++++-...+.|.+.++.... ... ...........+++.|.+..|+.+. .. +.|..++......
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~--l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~----- 237 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANLDGAH-RKV--LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR----- 237 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBTTSCS-CEE--EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----
T ss_pred EEeCCCeEEEEcCCCCeEEEEeCCCCc-eEE--eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-----
Confidence 8874 4455555566778887764322 111 1222234567888998766555443 34 5676665543211
Q ss_pred EeeeeccCCCCcccEEEEEEcCCCCE-EEEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCce
Q 018675 203 VQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI 281 (352)
Q Consensus 203 ~~~~~~~~~~h~~~i~~l~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 281 (352)
..+.. ......+.|+++|++.. +++-...+.|..++++.... ..+..........++...+..
T Consensus 238 -~~~~~---~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~~~~~~~~P~giav~~~~l 301 (386)
T 3v65_B 238 -RIIAD---THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR------------KAVISQGLPHPFAITVFEDSL 301 (386)
T ss_dssp -EEEEC---SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC------------EEEECSSCSSEEEEEEETTEE
T ss_pred -EEEEE---CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee------------EEEEECCCCCceEEEEECCEE
Confidence 11111 11235678999986554 44555667888887652111 001111122345555544555
Q ss_pred EEecCCCCeEEEEE
Q 018675 282 IASGAADDSVQFFV 295 (352)
Q Consensus 282 ~~s~~~d~~v~~~~ 295 (352)
+.+-...+.|..++
T Consensus 302 y~td~~~~~V~~~~ 315 (386)
T 3v65_B 302 YWTDWHTKSINSAN 315 (386)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEeeCCCCeEEEEE
Confidence 55555666666654
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.41 E-value=3.4 Score=35.48 Aligned_cols=195 Identities=14% Similarity=0.166 Sum_probs=107.6
Q ss_pred ccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC----CCCE--EE--EEeC--CCcEEEEEcc--CC
Q 018675 39 APVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP----SGKL--LA--TASF--DATTCIWEDV--GG 106 (352)
Q Consensus 39 ~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~----~~~~--l~--s~~~--d~~i~i~~~~--~~ 106 (352)
..++++....+-+.+||+ .++.+.. + ..+.++.+.+-| .|+. ++ +.-. ++++++|+.. ++
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~----~---~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHS----Y---NTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEE----E---CCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEE----c---cCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 345666677889999999 4433211 1 113444444444 2332 33 3333 5789999653 33
Q ss_pred ceeeeEee--c-ccc-CCeeEEEE--CCC-Cc-EEEEeeCCCcEEEEecCCC----CeeEEEEEeecCccCeeEEEEcCC
Q 018675 107 DYECVATL--E-GHE-NEVKSVSW--NAS-GT-LLATCGRDKSVWIWEVMPG----NEFECVSVLQGHAQDVKMVQWHPT 174 (352)
Q Consensus 107 ~~~~~~~~--~-~h~-~~v~~v~~--~~~-~~-~l~s~~~d~~v~vwd~~~~----~~~~~~~~~~~h~~~v~~~~~~~~ 174 (352)
+...+... . +.. ..+..++. +|. +. +++....++.+..|++... -..+.+..+.-. .++-.+...+.
T Consensus 112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~ 190 (355)
T 3amr_A 112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDE 190 (355)
T ss_dssp CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETT
T ss_pred ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCC
Confidence 32222110 0 011 45667777 664 43 5777888899999998432 123444555432 45667778888
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEE--cCCCC-EEEEEe-CCCcEEEEcCC
Q 018675 175 MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSF--NAKGD-KLVSCS-DDLTIKIWGAD 244 (352)
Q Consensus 175 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~--~~~~~-~l~s~~-~dg~i~iwd~~ 244 (352)
...|+.+-++..|..++...........+..+. .......+-.|++ .++++ ||++++ .++++.+||.+
T Consensus 191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~--~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD--GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS--SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCeEEEecccceEEEEeCCcCCCCCceEEEEec--CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 788999999866544443322211122222221 1112235777777 55555 555554 67799999864
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.35 E-value=0.97 Score=43.14 Aligned_cols=202 Identities=8% Similarity=-0.018 Sum_probs=98.3
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCCCcEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIW 101 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~i~ 101 (352)
.+.+|+|.+.. +.++.+-...+.|+.+++............+.. .-.....+++.+. ++++++-...+.|.+.
T Consensus 407 ~p~gla~d~~~-----~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-~~~~P~glavD~~~g~LY~tD~~~~~I~v~ 480 (699)
T 1n7d_A 407 NVVALDTEVAS-----NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 480 (699)
T ss_dssp TCCCCEEETTT-----TEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS-CC--CCCEECCCSSSBCEECCTTTSCEEEE
T ss_pred ceEEEcccccc-----CeEEEEecCCCeEEEEecCCCCCCcceEEEEeC-CCCCcceEEEEeeCCcEEEEeccCCeEEEE
Confidence 34566776643 234444445577777776541000000011100 1123456778754 4555555566788888
Q ss_pred EccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-C-CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC-EE
Q 018675 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-D-KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD-VL 178 (352)
Q Consensus 102 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d-~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 178 (352)
+..+.... ..+.........+++.|.+..|+.+.. . +.|.+.++.... ...+ ..........|+++|++. +.
T Consensus 481 d~dg~~~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l--~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 481 DTKGVKRK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSL--VTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp BSSSCCEE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEE--SCSSCSSCCCEEECTTTCCEE
T ss_pred ecCCCceE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEE--EeCCCCCccEEEEeccCCEEE
Confidence 76543221 112222245678888886554443332 2 567666653221 1111 111123346789998755 44
Q ss_pred EEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 179 FSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 179 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
++-+..+.|..+++..... . .+... .+.......|++..+ .++++-...+.|..++.
T Consensus 556 ~aD~~~~~I~~~d~dG~~~---~---~~~~~-~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNGGNR---K---TILED-EKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp EEETTTTEEEEECSSSSCC---E---EECCC-SSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred EEecCCCeEEEEccCCCce---E---EEEec-CCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 5555667888887643211 1 11110 011112234555544 44555566678888864
No 290
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.11 E-value=3.8 Score=35.21 Aligned_cols=106 Identities=14% Similarity=0.209 Sum_probs=58.3
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeee--eecceecceEEEEECCC----CCEEEEEeC
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAV--LEEMHTRTVRSCAWSPS----GKLLATASF 94 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~--~~~~h~~~v~~~~~s~~----~~~l~s~~~ 94 (352)
...-++|+|.|+ +.++++ ..++.|.+++ .+.. ..... +..........++|+|+ +.+.++-..
T Consensus 30 l~~P~~ia~~pd------G~l~V~-e~~g~I~~i~--~g~~--~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 30 LEVPWALAFLPD------GGMLIA-ERPGRIRLFR--EGRL--STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp CSCEEEEEECTT------SCEEEE-ETTTEEEEEE--TTEE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCCceEEEEcCC------CeEEEE-eCCCeEEEEE--CCCc--cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 344568999987 345554 5679999888 2221 11110 10111245788999998 455554443
Q ss_pred C-----CcEEEEEccCCce---eee-Eeec---cccCCeeEEEECCCCcEEEEee
Q 018675 95 D-----ATTCIWEDVGGDY---ECV-ATLE---GHENEVKSVSWNASGTLLATCG 137 (352)
Q Consensus 95 d-----~~i~i~~~~~~~~---~~~-~~~~---~h~~~v~~v~~~~~~~~l~s~~ 137 (352)
. +.|..++...+.. +.+ ..+. +.......+.|.|+|.+.++.+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 2 5566676543311 111 1122 1112346899999998777654
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.93 E-value=4.2 Score=35.11 Aligned_cols=156 Identities=8% Similarity=0.038 Sum_probs=84.3
Q ss_pred EEEEECCCCCEEEEE------------eCCCcEEEEEccC--CceeeeEeecc-----ccCCeeEEEECC--CCc--EEE
Q 018675 78 RSCAWSPSGKLLATA------------SFDATTCIWEDVG--GDYECVATLEG-----HENEVKSVSWNA--SGT--LLA 134 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~------------~~d~~i~i~~~~~--~~~~~~~~~~~-----h~~~v~~v~~~~--~~~--~l~ 134 (352)
-.+...|+|..++++ ..+|.|.++|..+ .+...+ .+.+ ..-....+.+.+ ++. +++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 445567777665554 2688899998753 222222 2222 223566777655 343 444
Q ss_pred EeeC--CCcEEEEecCCCC-eeEEEEEeecCc-cCeeEEEEcCCCCEEEEEeC---C------------CcEEEEecCCC
Q 018675 135 TCGR--DKSVWIWEVMPGN-EFECVSVLQGHA-QDVKMVQWHPTMDVLFSCSY---D------------NTIKVWWAEDT 195 (352)
Q Consensus 135 s~~~--d~~v~vwd~~~~~-~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~---d------------~~i~iw~~~~~ 195 (352)
+-.. +.++-+|++.... ....+..+.+.. ...+.+...+++.+.++... | ..=.+|....
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 4333 5678888876543 333344444322 34678888888876666431 1 1122332211
Q ss_pred CCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEcCC
Q 018675 196 DSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSC-SDDLTIKIWGAD 244 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~-~~dg~i~iwd~~ 244 (352)
..... +. ..-...+.++|+||++.|..+ +..++|..|+++
T Consensus 211 --~~~~~---~~----~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 211 --NDVRV---VA----EGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp --TCCEE---EE----EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred --CeEEE---ee----cCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 11111 11 012346789999999766554 457889988864
No 292
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.79 E-value=4.3 Score=34.90 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=62.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEee----ccccCCeeEEEECCC----CcEEEEe--eCCCcEEEE
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATL----EGHENEVKSVSWNAS----GTLLATC--GRDKSVWIW 145 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~----~~h~~~v~~v~~~~~----~~~l~s~--~~d~~v~vw 145 (352)
....++|.|+|+++++--..|.|.+++..++....+..+ .........++++|+ +.+.++- ..++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 457899999999887765588898887554443333322 122456789999995 4444432 234455555
Q ss_pred ecCCC-----C--eeEEE-EEee-cCccCeeEEEEcCCCCEEEEEe
Q 018675 146 EVMPG-----N--EFECV-SVLQ-GHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 146 d~~~~-----~--~~~~~-~~~~-~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
.+... . ..+.+ ..+. ........+.|.|++.+.++.+
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 54331 1 11222 2221 1112345789999998777654
No 293
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.72 E-value=4.8 Score=35.31 Aligned_cols=204 Identities=9% Similarity=-0.021 Sum_probs=108.5
Q ss_pred CccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC-CCCEEEEEeCCCcE
Q 018675 20 HTDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP-SGKLLATASFDATT 98 (352)
Q Consensus 20 H~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i 98 (352)
....+.+++|.+.+ +.++.+-...+.|..+++............+ ...-.....+++.+ .+++.++-...+.|
T Consensus 110 ~~~~~~~l~~d~~~-----~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~lY~~d~~~~~I 183 (400)
T 3p5b_L 110 NLRNVVALDTEVAS-----NRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTV 183 (400)
T ss_dssp SCSCEEEEEEETTT-----TEEEEEETTTTEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCcceEEeeeecc-----CceEEEecCCCeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCceEEEECCCCeE
Confidence 34567788888754 2455555566778777765421000001111 11123567788887 45555666667788
Q ss_pred EEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEee-C-CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCC
Q 018675 99 CIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG-R-DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMD 176 (352)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~-d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 176 (352)
.+.+..+..... .+...-.....|++.|.+..|+-+. . .+.|...++..... .. .....-.....++++|++.
T Consensus 184 ~~~~~~g~~~~~--l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~--~~~~~l~~P~glavd~~~~ 258 (400)
T 3p5b_L 184 SVADTKGVKRKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YS--LVTENIQWPNGITLDLLSG 258 (400)
T ss_dssp EEECTTTCSEEE--EEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EE--EECSSCSCEEEEEEETTTT
T ss_pred EEEeCCCCceEE--EEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EE--EEECCCCceEEEEEEeCCC
Confidence 887765443221 2222334578999998655544443 2 36777777643221 11 1122224567899998776
Q ss_pred EEEEE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 177 VLFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 177 ~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
.|+.+ +..+.|..++...... . .+... .+......+|++. .+..+.+-...+.|..++
T Consensus 259 ~lY~aD~~~~~I~~~d~dG~~~---~---~~~~~-~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 259 RLYWVDSKLHSISSIDVNGGNR---K---TILED-EKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEEEEETTTTEEEEEETTSCCC---E---EEEEC-SSTTSSEEEEEEE-TTEEEEEESSSCSEEEEE
T ss_pred EEEEEECCCCEEEEEeCCCCcc---E---EEEeC-CCCCCCCEEEEEe-CCEEEEecCCCCeEEEEE
Confidence 66555 4566788887654221 1 11111 1112334566763 334555555667777776
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.60 E-value=3.9 Score=33.94 Aligned_cols=146 Identities=11% Similarity=0.211 Sum_probs=73.3
Q ss_pred CCCEEEEEeCC-----CcEEEEEccCCc---eeeeEeeccccCCeeEEEECCCCcEEEEeeCC-----CcEEEEecCCCC
Q 018675 85 SGKLLATASFD-----ATTCIWEDVGGD---YECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPGN 151 (352)
Q Consensus 85 ~~~~l~s~~~d-----~~i~i~~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~vwd~~~~~ 151 (352)
++++++.|+.+ ..+.+||..+.. +..+..+......-.++.. ++.+++.|+.+ ..+.++|....
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~- 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID- 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT-
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC-
Confidence 57788888765 357788877766 5544333222222222222 56677777654 35777886543
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~ 226 (352)
....+..+.........+. .++.+++.|+.+ ..+.+||... ..|..+..+......|. ++.+ ++
T Consensus 139 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~---~~W~~~~~~p~~r~~~~----~~~~--~~ 207 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHT---GHWTNVTPMATKRSGAG----VALL--ND 207 (301)
T ss_dssp EEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTT---TEEEEECCCSSCCBSCE----EEEE--TT
T ss_pred eEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCC---CcEEeCCCCCcccccce----EEEE--CC
Confidence 3333332221111111222 255666676654 3577776533 34554433322222221 2222 45
Q ss_pred CEEEEEeCC-----CcEEEEcCC
Q 018675 227 DKLVSCSDD-----LTIKIWGAD 244 (352)
Q Consensus 227 ~~l~s~~~d-----g~i~iwd~~ 244 (352)
..++.|+.+ ..+.+||..
T Consensus 208 ~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 208 HIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp EEEEECCBCSSSBCCCEEEEETT
T ss_pred EEEEEeCCCCCcccceEEEEeCC
Confidence 667777764 357777764
No 295
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.53 E-value=4 Score=33.91 Aligned_cols=146 Identities=16% Similarity=0.224 Sum_probs=70.7
Q ss_pred CCCEEEEEeCCC-----cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-------CcEEEEecCCCCe
Q 018675 85 SGKLLATASFDA-----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-------KSVWIWEVMPGNE 152 (352)
Q Consensus 85 ~~~~l~s~~~d~-----~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-------~~v~vwd~~~~~~ 152 (352)
++++++.|+.++ .+.+||..+..+..+..+........++.+ ++.+++.|+.+ ..+.+||+... .
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN-E 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT-E
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC-c
Confidence 677888887654 456777766665544333221112222222 55666666543 35778887543 2
Q ss_pred eEEEEEeecCccCeeEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC
Q 018675 153 FECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 227 (352)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~ 227 (352)
...+..+.........+. .++.+++.|+.+ ..+.+||... ..|..+..+......|. .+.+ ++.
T Consensus 185 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~~~~r~~~~----~~~~--~~~ 253 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTT---NAWRQVADMNMCRRNAG----VCAV--NGL 253 (302)
T ss_dssp EEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTT---TEEEEECCCSSCCBSCE----EEEE--TTE
T ss_pred EEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCC---CCEeeCCCCCCccccCe----EEEE--CCE
Confidence 222221111111111222 245666777654 3577786543 34554433322222221 1222 566
Q ss_pred EEEEEeCCC-----cEEEEcCC
Q 018675 228 KLVSCSDDL-----TIKIWGAD 244 (352)
Q Consensus 228 ~l~s~~~dg-----~i~iwd~~ 244 (352)
.++.|+.++ .+.+||.+
T Consensus 254 i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 254 LYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EEEECCBCSSSBCCCEEEEETT
T ss_pred EEEECCcCCCcccccEEEEcCC
Confidence 677776553 35666653
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.16 E-value=8.9 Score=37.09 Aligned_cols=180 Identities=8% Similarity=0.023 Sum_probs=98.8
Q ss_pred CCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCCCcEEEEEccCCce--eeeEeeccccCCeeE
Q 018675 47 GDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDY--ECVATLEGHENEVKS 123 (352)
Q Consensus 47 ~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~~~~~~--~~~~~~~~h~~~v~~ 123 (352)
....|+..++..... ..++ .....+..++|++. ++++++-...+.|..++..+... .....+.........
T Consensus 402 n~~~Ir~i~l~~~~~----~~l~--~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEY----TSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp CBSSEEEECTTSCCC----EEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred cccceeEeeccCCcc----eeee--cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 456677777654321 1111 12345778999885 45555555667787776543210 112222323345678
Q ss_pred EEECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-C-CcEEEEecCCCCCCCc
Q 018675 124 VSWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY-D-NTIKVWWAEDTDSDNW 200 (352)
Q Consensus 124 v~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d-~~i~iw~~~~~~~~~~ 200 (352)
|++.+.+ +++++-...+.|.+.++.... ... .+.........|++.|....|+.+.. . +.|...++....
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~--l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~---- 548 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---- 548 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSS-EEE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCe-EEE--EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc----
Confidence 8888766 455565667889988875332 211 12223345678999987655555443 3 567766654321
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCCCEEE-EEeCCCcEEEEcCC
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGAD 244 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~-s~~~dg~i~iwd~~ 244 (352)
...+.. ......+.|++++.+..|. +=...+.|..++++
T Consensus 549 --~~~lv~---~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 549 --IYSLVT---ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp --EEEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred --eEEEEe---CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 111211 1224678899997655544 43455678888765
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.09 E-value=7.7 Score=36.17 Aligned_cols=111 Identities=8% Similarity=0.052 Sum_probs=62.1
Q ss_pred cEEEEeeC-CCeEEEEec-CCCceeeeeeeeeeccee------cceEEEEECCCCCE----EEEEeCCCcEEEEEccCCc
Q 018675 40 PVFASCSG-DKTVRIWEQ-SASSRFWNCKAVLEEMHT------RTVRSCAWSPSGKL----LATASFDATTCIWEDVGGD 107 (352)
Q Consensus 40 ~~l~s~s~-D~~v~~w~~-~~~~~~~~~~~~~~~~h~------~~v~~~~~s~~~~~----l~s~~~d~~i~i~~~~~~~ 107 (352)
..++.++. ++.|.-+|. .+++.+|+.......... .....++++|.+.. ++.++.|+.+..+|..+++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 45666677 899999999 899888876432211000 00122345443333 7778889999999988776
Q ss_pred eeeeEeecccc--CCeeE-EEECCCCcEEEEee------CCCcEEEEecCCCCe
Q 018675 108 YECVATLEGHE--NEVKS-VSWNASGTLLATCG------RDKSVWIWEVMPGNE 152 (352)
Q Consensus 108 ~~~~~~~~~h~--~~v~~-v~~~~~~~~l~s~~------~d~~v~vwd~~~~~~ 152 (352)
..=...+..+. ..+.+ ... .++ .++.++ .++.|..+|...++.
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred EEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcE
Confidence 42112222111 01111 111 134 444444 378999999887753
No 298
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.95 E-value=5.3 Score=35.77 Aligned_cols=113 Identities=11% Similarity=0.139 Sum_probs=59.7
Q ss_pred CCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEeec------CccCeeEEEEcCC---CCEEEEEe-C-----
Q 018675 119 NEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQG------HAQDVKMVQWHPT---MDVLFSCS-Y----- 183 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~------h~~~v~~~~~~~~---~~~l~s~~-~----- 183 (352)
...+.++|.|+|.++++-...+.|++++...+. ...+..+.. .......++|+|+ +..|..+. .
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~-~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc-EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 456799999999987765444567777643332 222222211 2345668999995 44444333 2
Q ss_pred -------CCcEEEEecCCCCC--CCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC
Q 018675 184 -------DNTIKVWWAEDTDS--DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD 234 (352)
Q Consensus 184 -------d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~ 234 (352)
...|.-++...... .....+.........| ....|.|.|+|.++++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H--~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDH--QSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSC--CEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCC--CCCeEeECCCCeEEEEECC
Confidence 12344443322110 0111111111111224 4678999999998887654
No 299
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.79 E-value=8 Score=35.77 Aligned_cols=66 Identities=5% Similarity=0.017 Sum_probs=38.9
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEE-EEECCCCCEEEEEeC------CCcEEEEEccCCce
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRS-CAWSPSGKLLATASF------DATTCIWEDVGGDY 108 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~-~~~s~~~~~l~s~~~------d~~i~i~~~~~~~~ 108 (352)
..++.++.|+.+..+|..+++..|+....- ......+.+ -... ++. ++.++. ++.+..+|..+++.
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~-~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCD-PKVGSTLTQAPFVA-KDT-VLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-GGGTCBCCSCCEEE-TTE-EEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCC-CCccceeccCCEEE-CCE-EEEEecCCccCCCCEEEEEECCCCcE
Confidence 467777889999999999998888653211 000001110 0011 444 444443 78899999877753
No 300
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.37 E-value=4.6 Score=32.22 Aligned_cols=117 Identities=13% Similarity=0.099 Sum_probs=62.9
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeE-eeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 164 QDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCV-QTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 164 ~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
..+..++|+|++.+.++ .++.+.-.+........|.-. ..+-. .+-. .-.++.|.|+|.+.++ .||.|.-++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~--~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN--GGWN-QFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC--SCGG-GCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecc--cccc-cceEEEECCCCCEEEe--CCCEEEEeC
Confidence 46789999998886555 566544333222222222111 01100 0111 1357889999998888 569887775
Q ss_pred CCccccccCCCCccceeeEEe-ecccCcceEEEEecCCceEEecCCCCeEEEE
Q 018675 243 ADITRMQSGDGYASWRHLCTI-SGYHDRTIFSVHWSREGIIASGAADDSVQFF 294 (352)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~s~~~d~~v~~~ 294 (352)
-.. .+...|...... -..-=..+..+.+.|++.|.+.. |+.++-.
T Consensus 114 pP~------~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~ 159 (236)
T 1tl2_A 114 PPQ------SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA 159 (236)
T ss_dssp CCC------STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred CCc------CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence 311 111233221111 10011346778889999888887 8875433
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.28 E-value=5.7 Score=33.03 Aligned_cols=186 Identities=10% Similarity=0.118 Sum_probs=87.2
Q ss_pred cEEEEeeCC----CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC------CcEEEEEccCCcee
Q 018675 40 PVFASCSGD----KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD------ATTCIWEDVGGDYE 109 (352)
Q Consensus 40 ~~l~s~s~D----~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d------~~i~i~~~~~~~~~ 109 (352)
.+++.||.+ ..+.+||..+.. |......... ...-.++.+ ++++++.|+.+ ..+.+||..+..+.
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDS--WYSKLGPPTP-RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTE--EEEEECCSSC-CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCe--EEECCCCCcc-ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 456666644 556677766542 3322111100 011111222 67788888765 45778887776665
Q ss_pred eeEeeccccCCeeEEEECCCCcEEEEeeC---------CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEE
Q 018675 110 CVATLEGHENEVKSVSWNASGTLLATCGR---------DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFS 180 (352)
Q Consensus 110 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---------d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 180 (352)
.+..+......-.++. -++.+++.|+. -..+.+||+... ....+..+....... ++... ++.+++.
T Consensus 132 ~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~-~~~~~-~~~i~v~ 206 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE-TWTELCPMIEARKNH-GLVFV-KDKIFAV 206 (306)
T ss_dssp EECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTT-EEEEECCCSSCCBSC-EEEEE-TTEEEEE
T ss_pred eCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCC-eEEECCCccchhhcc-eEEEE-CCEEEEE
Confidence 4433322111112222 25566666653 345778887543 232222111111111 12222 4556666
Q ss_pred EeCC-----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC-----CcEEEEcCC
Q 018675 181 CSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD-----LTIKIWGAD 244 (352)
Q Consensus 181 ~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d-----g~i~iwd~~ 244 (352)
|+.+ ..+.+||... ..|..+..+......| .++.+ ++..++.|+.+ ..+.+||..
T Consensus 207 GG~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~----~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 207 GGQNGLGGLDNVEYYDIKL---NEWKMVSPMPWKGVTV----KCAAV--GSIVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp CCEETTEEBCCEEEEETTT---TEEEECCCCSCCBSCC----EEEEE--TTEEEEEECBCSSSBCCEEEEEETT
T ss_pred eCCCCCCCCceEEEeeCCC---CcEEECCCCCCCccce----eEEEE--CCEEEEEeCcCCCeeeeeEEEEcCC
Confidence 6643 3567776543 3455443332222222 12222 56677777754 346666653
No 302
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.24 E-value=6.6 Score=33.73 Aligned_cols=112 Identities=12% Similarity=0.089 Sum_probs=63.0
Q ss_pred cCCeeEEEECCCCcEEEEeeCCCcEEEEecCCCCeeEEEEEe----ecCccCeeEEEEcCC---CCEEEEE-e--CCCcE
Q 018675 118 ENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVL----QGHAQDVKMVQWHPT---MDVLFSC-S--YDNTI 187 (352)
Q Consensus 118 ~~~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~----~~h~~~v~~~~~~~~---~~~l~s~-~--~d~~i 187 (352)
-...+.++|.|+|.++++--..+.|++++...+.. ..+..+ .........++++|+ ...|... + .++.|
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 45678999999999887766588888887543332 222221 122345788999995 3344332 2 34445
Q ss_pred EEEecCCCC-----CCCceeEe-eeeccCCCCcccEEEEEEcCCCCEEEEEe
Q 018675 188 KVWWAEDTD-----SDNWHCVQ-TISESNNGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 188 ~iw~~~~~~-----~~~~~~~~-~~~~~~~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
.-|.....+ ......+. .+. ....|. -..|.|.|+|.++++.+
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p-~~~~H~--g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIP-KGVIHN--GGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEEC-CCSSCC--CCCEEECTTSCEEEECB
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCC-CCCCcc--CccccCCCCCCEEEEEC
Confidence 445443311 11112111 121 122343 35689999999888865
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.95 E-value=6.1 Score=32.83 Aligned_cols=185 Identities=10% Similarity=0.114 Sum_probs=87.6
Q ss_pred EEEEeeCC--CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCC----CcEEEEEccCCceeeeEee
Q 018675 41 VFASCSGD--KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFD----ATTCIWEDVGGDYECVATL 114 (352)
Q Consensus 41 ~l~s~s~D--~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----~~i~i~~~~~~~~~~~~~~ 114 (352)
+++.||.+ ..+.+||..+.. |......... ...-.++. .++++++.|+.+ ..+.+||..+..+..+..+
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~--W~~~~~~p~~-r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYS--WTDIRCPFEK-RRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTE--EEECCCCSCC-CBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred EEEEeCCCCCceEEEecCCCCC--EecCCCCCcc-cceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 45555543 567778876542 3322111110 01111122 267788888765 5677888877766555443
Q ss_pred ccccCCeeEEEECCCCcEEEEeeCC------CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC-----
Q 018675 115 EGHENEVKSVSWNASGTLLATCGRD------KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY----- 183 (352)
Q Consensus 115 ~~h~~~v~~v~~~~~~~~l~s~~~d------~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----- 183 (352)
......-.++.+ ++.+++.|+.+ ..+.+||.... ....+..+.........+. .++.+++.|+.
T Consensus 89 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 89 PTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE-SWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNV 163 (306)
T ss_dssp SSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT-EEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTT
T ss_pred CccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC-ceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCC
Confidence 322222222222 56677777765 45778887543 2222221111111111122 24555566553
Q ss_pred ----CCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC-----cEEEEcCC
Q 018675 184 ----DNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL-----TIKIWGAD 244 (352)
Q Consensus 184 ----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg-----~i~iwd~~ 244 (352)
...+.+||... ..|..+..+......|. .+.+ ++..++.||.++ .+.+||..
T Consensus 164 ~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~----~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~ 224 (306)
T 3ii7_A 164 SGRVLNSCEVYDPAT---ETWTELCPMIEARKNHG----LVFV--KDKIFAVGGQNGLGGLDNVEYYDIK 224 (306)
T ss_dssp TCEECCCEEEEETTT---TEEEEECCCSSCCBSCE----EEEE--TTEEEEECCEETTEEBCCEEEEETT
T ss_pred cccccceEEEeCCCC---CeEEECCCccchhhcce----EEEE--CCEEEEEeCCCCCCCCceEEEeeCC
Confidence 34467776543 34554433322222222 1222 456667766543 46667654
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.88 E-value=6.1 Score=32.74 Aligned_cols=146 Identities=18% Similarity=0.284 Sum_probs=71.6
Q ss_pred CCCEEEEEeCCC-----cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCC-----cEEEEecCCCCeeE
Q 018675 85 SGKLLATASFDA-----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDK-----SVWIWEVMPGNEFE 154 (352)
Q Consensus 85 ~~~~l~s~~~d~-----~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----~v~vwd~~~~~~~~ 154 (352)
++++++.|+.++ .+.+||..+.++..+..+......-.++.+ ++.+++.|+.++ .+.+||+... ...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSN-EWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTT-EEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCC-eEe
Confidence 677888887553 577888777666554433322222222222 566777777553 4667776533 222
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCC-------CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCC
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-------NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGD 227 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~ 227 (352)
.+..+....... ++.. .++.+++.|+.+ ..+.+||.. ...|..+..+......|. .+.+ ++.
T Consensus 138 ~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~---~~~W~~~~~~p~~r~~~~----~~~~--~~~ 206 (302)
T 2xn4_A 138 HVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNAT---TNEWTYIAEMSTRRSGAG----VGVL--NNL 206 (302)
T ss_dssp EECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETT---TTEEEEECCCSSCCBSCE----EEEE--TTE
T ss_pred ecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCC---CCcEEECCCCcccccccc----EEEE--CCE
Confidence 222111111111 1222 245566666542 346777653 334554433322222221 2222 466
Q ss_pred EEEEEeCCC-----cEEEEcCC
Q 018675 228 KLVSCSDDL-----TIKIWGAD 244 (352)
Q Consensus 228 ~l~s~~~dg-----~i~iwd~~ 244 (352)
+++.||.++ .+.+||..
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETT
T ss_pred EEEECCCCCCcccceEEEEeCC
Confidence 777777643 56677754
No 305
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.73 E-value=6.5 Score=32.77 Aligned_cols=146 Identities=14% Similarity=0.228 Sum_probs=70.6
Q ss_pred CCCEEEEEeC----C-----CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-----CcEEEEecCCC
Q 018675 85 SGKLLATASF----D-----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPG 150 (352)
Q Consensus 85 ~~~~l~s~~~----d-----~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~vwd~~~~ 150 (352)
++++++.|+. + ..+.+||..+..+..+..+........++.+ ++.+++.|+.+ ..+.++|....
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 6777777775 2 3577788777665544333221122222222 56666666643 35777886543
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
....+..+.........+.+ ++.+++.|+.+ ..+.+||.. ...|..+..+......|. ++.+ +
T Consensus 148 -~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~---~~~W~~~~~~p~~r~~~~----~~~~--~ 215 (308)
T 1zgk_A 148 -EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPE---RNEWRMITAMNTIRSGAG----VCVL--H 215 (308)
T ss_dssp -EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETT---TTEEEECCCCSSCCBSCE----EEEE--T
T ss_pred -eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCC---CCeEeeCCCCCCccccce----EEEE--C
Confidence 22222111111111112222 45666666654 357777653 334544333222222221 2222 5
Q ss_pred CCEEEEEeCC-----CcEEEEcCC
Q 018675 226 GDKLVSCSDD-----LTIKIWGAD 244 (352)
Q Consensus 226 ~~~l~s~~~d-----g~i~iwd~~ 244 (352)
+..++.||.+ ..+.+||+.
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETT
T ss_pred CEEEEEeCCCCCCccceEEEEeCC
Confidence 6667777654 457777764
No 306
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.66 E-value=6.9 Score=32.92 Aligned_cols=178 Identities=8% Similarity=0.026 Sum_probs=99.6
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcEEEEEccCC---ceeeeEeeccccCCeeE
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTCIWEDVGG---DYECVATLEGHENEVKS 123 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~---~~~~~~~~~~h~~~v~~ 123 (352)
...|+..++.+.... ..+. .-.....++|++.++ +..+-...+.|..++..+. .. ....+...-.....
T Consensus 9 ~~~I~~i~~~~~~~~----~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~-~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYT----SLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISRDIQAPDG 81 (316)
T ss_dssp BSSEEEEETTSCCCE----EEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCE
T ss_pred CCeEEEEECCCcceE----ehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc-cEEEEeCCCCCcCE
Confidence 456888887764321 1111 124567899998654 5555556688888876541 11 11122222245678
Q ss_pred EEECCC-CcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCC--CcEEEEecCCCCCCCc
Q 018675 124 VSWNAS-GTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYD--NTIKVWWAEDTDSDNW 200 (352)
Q Consensus 124 v~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--~~i~iw~~~~~~~~~~ 200 (352)
+++.+. +++.++-...+.|.+.++... .... ...........+++.|.+..|+.+... +.|...++....
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~-~~~~--~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---- 154 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGV-KRKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---- 154 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSS-SEEE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCC-ceEE--EEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC----
Confidence 888864 455556567788999987532 2221 122223456788999866655544433 567666553321
Q ss_pred eeEeeeeccCCCCcccEEEEEEcCCCCEEE-EEeCCCcEEEEcCC
Q 018675 201 HCVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGAD 244 (352)
Q Consensus 201 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~-s~~~dg~i~iwd~~ 244 (352)
...+.. ......+.|+++|++..|. +-...+.|..+|++
T Consensus 155 --~~~~~~---~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 155 --IYSLVT---ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp --EEEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred --eEEEEE---CCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 111111 1124577899998765554 44566789988875
No 307
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.59 E-value=7.7 Score=33.36 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=58.1
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC----CCEEEEEeC--
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS----GKLLATASF-- 94 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~----~~~l~s~~~-- 94 (352)
...-++|+|.|+ +.+++ +..++.|++++.. +........ +..........++|+|+ +.+.++-+.
T Consensus 28 l~~P~~ia~~pd------G~l~V-~e~~g~I~~~d~~-G~~~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 28 LEVPWSIAPLGG------GRYLV-TERPGRLVLISPS-GKKLVASFD-VANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp CSCEEEEEEEET------TEEEE-EETTTEEEEECSS-CEEEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCCeEEEEcCC------CeEEE-EeCCCEEEEEeCC-CceEeeccc-eeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 445678999996 34444 4667999888632 221110000 10111245788999997 555555442
Q ss_pred -C----CcEEEEEccCC--c---eeee-Eeec-cccCCeeEEEECCCCcEEEEee
Q 018675 95 -D----ATTCIWEDVGG--D---YECV-ATLE-GHENEVKSVSWNASGTLLATCG 137 (352)
Q Consensus 95 -d----~~i~i~~~~~~--~---~~~~-~~~~-~h~~~v~~v~~~~~~~~l~s~~ 137 (352)
+ +.|..++.... . .+.+ ..+. ........+.|.|+|.+.++.+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 3 45666665433 1 1111 1122 1111346799999998877754
No 308
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=90.40 E-value=13 Score=35.86 Aligned_cols=203 Identities=9% Similarity=-0.021 Sum_probs=105.4
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTC 99 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~ 99 (352)
...+.+|+|.+.. +.++.+-...+.|+.+++............+ ...-.....+++.+.++ +.++-...+.|.
T Consensus 423 ~~~~~gl~~d~~~-----~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~ 496 (791)
T 3m0c_C 423 LRNVVALDTEVAS-----NRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 496 (791)
T ss_dssp CSSEEEEEEETTT-----TEEEEEETTTTEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEeecccC-----CeeEEeeccceeEEEEeccCCCCCcceeEEE-ecCCCCcceeeeeecCCcEEEEecCCCeEE
Confidence 4456678887743 3455565566777777765421100001111 11123456788887664 555556677888
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-C-CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-D-KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d-~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
+.+..+..... .+...-.....|++.|....|+-+.. . ..|...++.... .. ......-.....|++.+....
T Consensus 497 v~~ldG~~~~~--l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~--~lv~~~l~~P~GLavD~~~~~ 571 (791)
T 3m0c_C 497 VADTKGVKRKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IY--SLVTENIQWPNGITLDLLSGR 571 (791)
T ss_dssp EEETTSSSEEE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EE--EEECSSCSCEEEEEEETTTTE
T ss_pred EEeCCCCeEEE--EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eE--EEEeCCCCCceEEEEecCCCe
Confidence 88765543221 22223345789999987554444432 2 567777764322 11 122222345678899977666
Q ss_pred EEEE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEc
Q 018675 178 LFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWG 242 (352)
Q Consensus 178 l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd 242 (352)
|+.+ ...+.|...++..... . .+... .+......+|++..+ .++++-...+.|...+
T Consensus 572 LYwaD~~~~~I~~~d~dG~~~---~---~v~~~-~~~l~~P~glav~~~-~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 572 LYWVDSKLHSISSIDVNGGNR---K---TILED-EKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEEEETTTTEEEEEETTSCSC---E---EEEEC-TTTTSSEEEEEEETT-EEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCcEEEEecCCCce---E---EEecC-CCccCCCCEEEEeCC-EEEEEECCCCEEEEEe
Confidence 6555 4456787777644321 1 11111 011123446666433 4444545556666665
No 309
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.34 E-value=7.5 Score=32.84 Aligned_cols=221 Identities=9% Similarity=-0.021 Sum_probs=117.6
Q ss_pred CCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEE
Q 018675 47 GDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125 (352)
Q Consensus 47 ~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~ 125 (352)
....|+..++........ ..+. ....+.+++|++. +.+..+-...+.|..++..++.... ..+...-.....++
T Consensus 11 ~~~~I~~i~l~~~~~~~~--~~~~--~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-~~~~~~l~~p~gla 85 (318)
T 3sov_A 11 NRRDLRLVDATNGKENAT--IVVG--GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-NVVVSGLLSPDGLA 85 (318)
T ss_dssp CEEEEEEEETTCTTSCCE--EEEE--EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-EEEEECCSCCCEEE
T ss_pred ccCeEEEEECCCCceEEE--EEec--CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-EEEcCCCCCccEEE
Confidence 457888888876531111 1111 1235678899985 4555565567788888765542111 11111123466788
Q ss_pred ECC-CCcEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCcee
Q 018675 126 WNA-SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHC 202 (352)
Q Consensus 126 ~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--d~~i~iw~~~~~~~~~~~~ 202 (352)
+.+ .+.++++-...+.|.+.++... ....+ ..........+++.|.+..|+.+.. .+.|...+......
T Consensus 86 vd~~~g~ly~~d~~~~~I~~~~~dG~-~~~~l--~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~----- 157 (318)
T 3sov_A 86 CDWLGEKLYWTDSETNRIEVSNLDGS-LRKVL--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR----- 157 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSC-SCEEE--ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-----
T ss_pred EEcCCCeEEEEECCCCEEEEEECCCC-cEEEE--EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-----
Confidence 886 4555566566778999887532 21211 2223345678889887555555442 46676665543211
Q ss_pred EeeeeccCCCCcccEEEEEEcCCCCEE-EEEeCCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCce
Q 018675 203 VQTISESNNGHSSTIWALSFNAKGDKL-VSCSDDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI 281 (352)
Q Consensus 203 ~~~~~~~~~~h~~~i~~l~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 281 (352)
..+.. ..-...+.|+++|++..| ++=+..+.|..++++..... .+..........++...+..
T Consensus 158 -~~~~~---~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~------------~~~~~~~~~P~glav~~~~l 221 (318)
T 3sov_A 158 -FIIIN---SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ------------AVVKGSLPHPFALTLFEDIL 221 (318)
T ss_dssp -EEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------EEECSCCSCEEEEEEETTEE
T ss_pred -EEEEE---CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE------------EEecCCCCCceEEEEeCCEE
Confidence 11111 112356789999865544 45456678888886521110 00001122344555555555
Q ss_pred EEecCCCCeEEEEEc
Q 018675 282 IASGAADDSVQFFVE 296 (352)
Q Consensus 282 ~~s~~~d~~v~~~~~ 296 (352)
+.+-...+.|..+..
T Consensus 222 ywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 222 YWTDWSTHSILACNK 236 (318)
T ss_dssp EEEETTTTEEEEEET
T ss_pred EEEecCCCeEEEEEC
Confidence 555555566665544
No 310
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.25 E-value=7.6 Score=32.79 Aligned_cols=197 Identities=9% Similarity=-0.037 Sum_probs=108.1
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCC-CCEEEEEeCCCcEEEE
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPS-GKLLATASFDATTCIW 101 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~i~ 101 (352)
...+++|.+.+ +.++.+-...+.|..++....... ..... ..-.....+++.+. +.+.++-...+.|.++
T Consensus 36 ~~~~ld~d~~~-----~~lyw~D~~~~~I~r~~~~g~~~~---~~~~~-~~l~~p~glavd~~~g~ly~~d~~~~~I~~~ 106 (318)
T 3sov_A 36 DAAAVDFVFSH-----GLIYWSDVSEEAIKRTEFNKTESV---QNVVV-SGLLSPDGLACDWLGEKLYWTDSETNRIEVS 106 (318)
T ss_dssp EEEEEEEEGGG-----TEEEEEETTTTEEEEEETTSSSCC---CEEEE-ECCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccEEEEEEeCC-----CEEEEEECCCCcEEEEEccCCCce---EEEEc-CCCCCccEEEEEcCCCeEEEEECCCCEEEEE
Confidence 45678898853 345666566788888887654210 00110 01124567888874 4555666667788888
Q ss_pred EccCCceeeeEeeccccCCeeEEEECCCCcEEEEee--CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEE
Q 018675 102 EDVGGDYECVATLEGHENEVKSVSWNASGTLLATCG--RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLF 179 (352)
Q Consensus 102 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 179 (352)
+..+..... ...........+++.|.+..|+-+. ..+.|...++.. .....+ ....-..-..++++|++..|+
T Consensus 107 ~~dG~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~--~~~~l~~Pnglavd~~~~~lY 181 (318)
T 3sov_A 107 NLDGSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFII--INSEIYWPNGLTLDYEEQKLY 181 (318)
T ss_dssp ETTSCSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEE--ECSSCSCEEEEEEETTTTEEE
T ss_pred ECCCCcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEE--EECCCCCccEEEEeccCCEEE
Confidence 765432221 1223335678899998655544444 246677776542 221111 112223457899998766555
Q ss_pred EE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 180 SC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 180 s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
.+ +..+.|..++...... . .+.. +.......+++.. +..+.+-...+.|..++.
T Consensus 182 ~aD~~~~~I~~~d~dG~~~---~---~~~~---~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 182 WADAKLNFIHKSNLDGTNR---Q---AVVK---GSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp EEETTTTEEEEEETTSCSC---E---EEEC---SCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred EEECCCCEEEEEcCCCCce---E---EEec---CCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 44 5567788887653221 1 1111 1123455677753 344555555677777764
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.15 E-value=7.1 Score=32.28 Aligned_cols=145 Identities=13% Similarity=0.235 Sum_probs=72.3
Q ss_pred CCCEEEEEeCCC-----cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-----CcEEEEecCCCCeeE
Q 018675 85 SGKLLATASFDA-----TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPGNEFE 154 (352)
Q Consensus 85 ~~~~l~s~~~d~-----~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~vwd~~~~~~~~ 154 (352)
++++++.|+.++ .+.+||..+..+..+..+......-.++.+ ++.+++.|+.+ ..+.++|+... ...
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~ 188 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG-HWT 188 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT-EEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC-cEE
Confidence 677888877543 577788777766555443322222222222 56677777654 45778887543 333
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
.+..+.........+. .++.+++.|+.+ ..+.+||... ..|..+..+......|. ++.+ ++..+
T Consensus 189 ~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~----~~~~--~~~i~ 257 (301)
T 2vpj_A 189 NVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRT---DSWTTVTSMTTPRCYVG----ATVL--RGRLY 257 (301)
T ss_dssp EECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTT---TEEEEECCCSSCCBSCE----EEEE--TTEEE
T ss_pred eCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCC---CcEEECCCCCCccccee----EEEE--CCEEE
Confidence 2221111111111222 245666777654 4677886643 34554433322222221 2222 56667
Q ss_pred EEEeCCC-----cEEEEcC
Q 018675 230 VSCSDDL-----TIKIWGA 243 (352)
Q Consensus 230 ~s~~~dg-----~i~iwd~ 243 (352)
+.|+.++ .+.+||.
T Consensus 258 v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 258 AIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp EECCBCSSSBEEEEEEEET
T ss_pred EEcCcCCCcccccEEEEcC
Confidence 7776553 4555654
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.94 E-value=18 Score=36.68 Aligned_cols=152 Identities=12% Similarity=0.163 Sum_probs=82.9
Q ss_pred EEEEECCC-CCEEEEEe----------CCCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEEe
Q 018675 78 RSCAWSPS-GKLLATAS----------FDATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIWE 146 (352)
Q Consensus 78 ~~~~~s~~-~~~l~s~~----------~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vwd 146 (352)
..+.|..+ ..+++.|. ..|.|.+|+....+.+.+... ...++|++++-- +| +|++|- .+++++|+
T Consensus 835 ~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~-~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~ 910 (1158)
T 3ei3_A 835 VSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEK-EVKGAVYSMVEF-NG-KLLASI-NSTVRLYE 910 (1158)
T ss_dssp EEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEE-EESSCEEEEEEE-TT-EEEEEE-TTEEEEEE
T ss_pred EEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEE-EcCCcCEEEeee-CC-EEEEEc-CCEEEEEE
Confidence 33445433 46788776 236788888765555544433 346788888633 34 444443 37899999
Q ss_pred cCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCC
Q 018675 147 VMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKG 226 (352)
Q Consensus 147 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~ 226 (352)
+...+...+... +...+..+.....+++++.|..-..+.+...... ... +..+ ..+-+..++.++.+=-+
T Consensus 911 l~~~~~L~~~~~---~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~-~~~---L~~~--a~D~~~~~vta~~~ld~- 980 (1158)
T 3ei3_A 911 WTTEKELRTECN---HYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPM-EGN---FEEI--ARDFNPNWMSAVEILDD- 980 (1158)
T ss_dssp ECTTSCEEEEEE---ECCCSCEEEEEEETTEEEEEESSBCEEEEEEETT-TTE---EEEE--EECCSCBCEEEEEEEET-
T ss_pred CCCCceEEEEee---ccccEEEEEEeccCCEEEEEEhhheEEEEEEEcC-CCe---EEEE--EeecccccEEEEEEEcc-
Confidence 865443221111 1112333333334667888877777766532221 111 1111 11223456777776433
Q ss_pred CEEEEEeCCCcEEEEcC
Q 018675 227 DKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 227 ~~l~s~~~dg~i~iwd~ 243 (352)
..++.+..+|.+.+...
T Consensus 981 ~t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 981 DNFLGAENAFNLFVCQK 997 (1158)
T ss_dssp TEEEEEETTSEEEEEEE
T ss_pred CcEEEEcCCCcEEEEec
Confidence 46777888888887753
No 313
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.76 E-value=8.7 Score=32.72 Aligned_cols=51 Identities=6% Similarity=-0.018 Sum_probs=26.3
Q ss_pred CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC------CcEEEEec
Q 018675 96 ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD------KSVWIWEV 147 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d------~~v~vwd~ 147 (352)
..+.+||..+..+..+..+......-.++.. -++.+++.|+.+ ..+..+|+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 4677888877776655444321111012222 245666666532 34666765
No 314
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.65 E-value=13 Score=34.51 Aligned_cols=56 Identities=11% Similarity=0.142 Sum_probs=33.1
Q ss_pred CcEEEEEccCCceeeeEeecccc--------CCeeEEEEC-CCCc---EEEEeeCCCcEEEEecCCCCe
Q 018675 96 ATTCIWEDVGGDYECVATLEGHE--------NEVKSVSWN-ASGT---LLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 96 ~~i~i~~~~~~~~~~~~~~~~h~--------~~v~~v~~~-~~~~---~l~s~~~d~~v~vwd~~~~~~ 152 (352)
+.+..+|..+++..=......|. .++. +... .+|+ .++.++.+|.+.++|...++.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 358 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKL 358 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCE
Confidence 57888888777643222222232 1121 1221 4563 688899999999999876653
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.89 E-value=9.2 Score=31.82 Aligned_cols=145 Identities=14% Similarity=0.194 Sum_probs=70.1
Q ss_pred CCCEEEEEeCC-----CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeCC-----CcEEEEecCCCCeeE
Q 018675 85 SGKLLATASFD-----ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGRD-----KSVWIWEVMPGNEFE 154 (352)
Q Consensus 85 ~~~~l~s~~~d-----~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~v~vwd~~~~~~~~ 154 (352)
++++++.|+.+ ..+.+||..+..+..+..+......-.++.+ ++.+++.|+.+ ..+.++|+... ...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN-EWR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT-EEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC-eEe
Confidence 67777877654 3577788777665544333221222222222 56677777654 45778887543 222
Q ss_pred EEEEeecCccCeeEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEE
Q 018675 155 CVSVLQGHAQDVKMVQWHPTMDVLFSCSYD-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKL 229 (352)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 229 (352)
.+..+.........+.+ ++.+++.|+.+ ..+.+||+.. ..|..+..+......|. .+.+ ++..+
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~----~~~~--~~~i~ 266 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET---ETWTFVAPMKHRRSALG----ITVH--QGRIY 266 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT---TEEEECCCCSSCCBSCE----EEEE--TTEEE
T ss_pred eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC---CcEEECCCCCCCccceE----EEEE--CCEEE
Confidence 22111111111112222 55666777654 4577886543 34544333222222221 1222 45666
Q ss_pred EEEeCCC-----cEEEEcC
Q 018675 230 VSCSDDL-----TIKIWGA 243 (352)
Q Consensus 230 ~s~~~dg-----~i~iwd~ 243 (352)
+.|+.++ .+.+||.
T Consensus 267 v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 267 VLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp EECCBCSSCBCCEEEEEET
T ss_pred EEcCcCCCcccceEEEEcC
Confidence 7776543 3555554
No 316
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=88.69 E-value=11 Score=32.40 Aligned_cols=143 Identities=10% Similarity=0.122 Sum_probs=78.0
Q ss_pred CCEEEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEEEECCC----Cc---E-EEEeeC--CCcEEEEecCCCC-eeE
Q 018675 86 GKLLATASFDATTCIWEDVGGDYECVATLEGHENEVKSVSWNAS----GT---L-LATCGR--DKSVWIWEVMPGN-EFE 154 (352)
Q Consensus 86 ~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~----~~---~-l~s~~~--d~~v~vwd~~~~~-~~~ 154 (352)
..+++.....+.+.+||.. ++ .+..+.. +.++.+..-|. +. + +++... +++|.+|++.+.. ...
T Consensus 40 ~s~ii~t~k~~gL~Vydl~-G~--~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLD-GK--MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GCEEEEEETTTEEEEEETT-SC--EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred ccEEEEEcCCCCEEEEcCC-Cc--EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 3455656677889999984 43 3444432 56777766552 22 2 333334 5899999874322 222
Q ss_pred EEEE----eecCccCeeEEEE--cCC-CC-EEEEEeCCCcEEEEecCCCCCC--CceeEeeeeccCCCCcccEEEEEEcC
Q 018675 155 CVSV----LQGHAQDVKMVQW--HPT-MD-VLFSCSYDNTIKVWWAEDTDSD--NWHCVQTISESNNGHSSTIWALSFNA 224 (352)
Q Consensus 155 ~~~~----~~~h~~~v~~~~~--~~~-~~-~l~s~~~d~~i~iw~~~~~~~~--~~~~~~~~~~~~~~h~~~i~~l~~~~ 224 (352)
.+.. +......+..+++ +|. +. ++++...++.+..|.+...... ..+.+.++. ....+-.+...+
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-----lgsq~EgcvvDd 189 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-----MNSQTEGMAADD 189 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-----CSSCEEEEEEET
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-----CCCCcceEEEcC
Confidence 2100 0011133444555 564 43 5778888899999877543221 122233332 124566777777
Q ss_pred CCCEEEEEeCCCcE
Q 018675 225 KGDKLVSCSDDLTI 238 (352)
Q Consensus 225 ~~~~l~s~~~dg~i 238 (352)
....|..+-++.-|
T Consensus 190 ~~g~Lyv~eEd~GI 203 (355)
T 3amr_A 190 EYGRLYIAEEDEAI 203 (355)
T ss_dssp TTTEEEEEETTTEE
T ss_pred CCCeEEEecccceE
Confidence 77777777776443
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=87.76 E-value=11 Score=31.41 Aligned_cols=183 Identities=10% Similarity=0.123 Sum_probs=84.7
Q ss_pred EEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC----CC-------cEEEEEccCCceee
Q 018675 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF----DA-------TTCIWEDVGGDYEC 110 (352)
Q Consensus 42 l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----d~-------~i~i~~~~~~~~~~ 110 (352)
++.|+ ..+..||..+.. |.... ... ............++++++.|+. ++ .+..||..+..+..
T Consensus 8 ~~~GG--~~~~~yd~~~~~--W~~~~-~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANE--CYCAS-LSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEET--TEEEEEETTTTE--EEEEE-CCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEcC--CceEEECCCCCe--EecCC-CCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 34444 568888887653 44311 100 1112223334457888888884 11 25567776665544
Q ss_pred eEeeccccCCeeEEEECCCCcEEEEeeCC--------CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEe
Q 018675 111 VATLEGHENEVKSVSWNASGTLLATCGRD--------KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 111 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d--------~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 182 (352)
+..+......-..+.+ ++.+++.|+.+ ..+.++|.... ....+..+....... ++.. .++.+++.|+
T Consensus 82 ~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG 156 (315)
T 4asc_A 82 MPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSF-KWGESDPLPYVVYGH-TVLS-HMDLVYVIGG 156 (315)
T ss_dssp CCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTT-EEEECCCCSSCCBSC-EEEE-ETTEEEEECC
T ss_pred CCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCC-cEeECCCCCCcccce-eEEE-ECCEEEEEeC
Confidence 3322211111112222 55666666632 45778887543 222222111111111 1222 3455666776
Q ss_pred C-C-----CcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC-----cEEEEcCC
Q 018675 183 Y-D-----NTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL-----TIKIWGAD 244 (352)
Q Consensus 183 ~-d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg-----~i~iwd~~ 244 (352)
. + ..+.+||... ..|..+..+......|. ++.+ ++..++.||.++ .+.+||..
T Consensus 157 ~~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~----~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKK---FEWKELAPMQTARSLFG----ATVH--DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp BCTTSCBCCCEEEEETTT---TEEEECCCCSSCCBSCE----EEEE--TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred CCCCCcccceEEEEeCCC---CeEEECCCCCCchhceE----EEEE--CCEEEEEeccCCCCccceEEEEECC
Confidence 5 2 3577776543 34544433322222222 1222 566777777554 36666653
No 318
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.56 E-value=12 Score=31.47 Aligned_cols=219 Identities=9% Similarity=-0.010 Sum_probs=113.5
Q ss_pred CCcEEEEEccCCceeeeEeeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCC---CeeEEEEEeecCccCeeEEE
Q 018675 95 DATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPG---NEFECVSVLQGHAQDVKMVQ 170 (352)
Q Consensus 95 d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~---~~~~~~~~~~~h~~~v~~~~ 170 (352)
...|+..+..+.+... .+. ....+..++|.+.+. ++++-..++.|..+++... .... ..+.........++
T Consensus 9 ~~~I~~i~~~~~~~~~--~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~--~~~~~~~~~p~gla 83 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTS--LIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLA 83 (316)
T ss_dssp BSSEEEEETTSCCCEE--EEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE--EEECSSCSCCCEEE
T ss_pred CCeEEEEECCCcceEe--hhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE--EEEeCCCCCcCEEE
Confidence 3457777765543322 222 235678999998654 5555556688888887531 1111 11222223456788
Q ss_pred EcCCCC-EEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeC-C-CcEEEEcCCccc
Q 018675 171 WHPTMD-VLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSD-D-LTIKIWGADITR 247 (352)
Q Consensus 171 ~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~-d-g~i~iwd~~~~~ 247 (352)
+.+.+. +.++-...+.|.+.+..... ...+.. ........++++|.+..|..... . +.|...+++...
T Consensus 84 vd~~~~~ly~~d~~~~~I~~~~~~g~~------~~~~~~---~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 84 VDWIHSNIYWTDSVLGTVSVADTKGVK------RKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 154 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSS------EEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred EeecCCeEEEEECCCCEEEEEeCCCCc------eEEEEE---CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence 876544 44555667788888754321 111111 11235678999996665443333 2 677777654211
Q ss_pred cccCCCCccceeeEEeecccCcceEEEEecCC-c-eEEecCCCCeEEEEEccCCccccCcccceeeecccccCcceeEEE
Q 018675 248 MQSGDGYASWRHLCTISGYHDRTIFSVHWSRE-G-IIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQ 325 (352)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~~~s~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 325 (352)
. ..+....-.....++++++ + ++.+-...+.|..++..... ...+.. ....-.....++
T Consensus 155 ~------------~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~------~~~~~~-~~~~~~~P~gia 215 (316)
T 1ijq_A 155 I------------YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN------RKTILE-DEKRLAHPFSLA 215 (316)
T ss_dssp E------------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS------CEEEEE-CTTTTSSEEEEE
T ss_pred e------------EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc------eEEEee-cCCccCCcEEEE
Confidence 1 0111111234566777753 3 44555556677777654311 112211 111122345677
Q ss_pred ecCCCcceEEEecCCCeEEEEee
Q 018675 326 WSPGERRLLASASDDGMIKIWEL 348 (352)
Q Consensus 326 ~sp~~~~~l~s~~~Dg~i~iw~~ 348 (352)
+.. + .++++-...+.|..++.
T Consensus 216 v~~-~-~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 216 VFE-D-KVFWTDIINEAIFSANR 236 (316)
T ss_dssp EET-T-EEEEEETTTTEEEEEET
T ss_pred EEC-C-EEEEEECCCCeEEEEeC
Confidence 743 3 57777777788877765
No 319
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=87.13 E-value=17 Score=32.89 Aligned_cols=161 Identities=12% Similarity=0.165 Sum_probs=86.6
Q ss_pred eEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEE-------CCCCCEEEEEeCCC
Q 018675 24 VWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAW-------SPSGKLLATASFDA 96 (352)
Q Consensus 24 V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~-------s~~~~~l~s~~~d~ 96 (352)
-..|+|.|.+. +.++++....+.|++.|...+.. ..... ...........++| +++|+.|.++...+
T Consensus 141 p~~la~dp~~~----~~Lyv~~~~~~~i~~ID~~~~~v-~~l~~-~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 141 NGRLAFDPLNK----DHLYICYDGHKAIQLIDLKNRML-SSPLN-INTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEEETTEE----EEEEEEEETEEEEEEEETTTTEE-EEEEC-CTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCEEEEccCCC----CEEEEEECCCCeEEEEECCCCEE-EEEEc-cCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 45788888311 24455544446777788765432 11111 10111235789999 99999665555443
Q ss_pred -c------EEEEEccC-Cceee---eEeeccccCCeeEEEECC-CCcEEEEeeCCCcEEEEecC-------CCCe-----
Q 018675 97 -T------TCIWEDVG-GDYEC---VATLEGHENEVKSVSWNA-SGTLLATCGRDKSVWIWEVM-------PGNE----- 152 (352)
Q Consensus 97 -~------i~i~~~~~-~~~~~---~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~v~vwd~~-------~~~~----- 152 (352)
. +.+.+... +.... ...+... .....++.+| ++.++++-..++.|..+|+. .+..
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred CCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 2 44443222 12210 0111111 2345778899 55666666677889999986 3321
Q ss_pred ------eEEEEEeecCccCeeEEEEcCCCCEEE-EEeCCCcEEEEec
Q 018675 153 ------FECVSVLQGHAQDVKMVQWHPTMDVLF-SCSYDNTIKVWWA 192 (352)
Q Consensus 153 ------~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~iw~~ 192 (352)
...+... +....-..++|+|++..|+ +-+....|+.++.
T Consensus 294 ~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 294 KNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp GGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 1122222 1223346899999999544 4455667777543
No 320
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=85.11 E-value=24 Score=32.79 Aligned_cols=64 Identities=11% Similarity=0.066 Sum_probs=37.8
Q ss_pred EEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEE-EEECCCCCEEEEEe------CCCcEEEEEccCCce
Q 018675 42 FASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRS-CAWSPSGKLLATAS------FDATTCIWEDVGGDY 108 (352)
Q Consensus 42 l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~-~~~s~~~~~l~s~~------~d~~i~i~~~~~~~~ 108 (352)
++.++.|+.|.-+|..+++..|+....-.. ....+.+ -.+ .++. +++++ .++.+..+|..+++.
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~-~~~~~~ssP~v-~~g~-V~vg~~g~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIK-VGSTLTIAPYV-VKDK-VIIGSSGAELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGG-GTCBCCSCCEE-ETTE-EEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCC-ccceeecCCEE-ECCE-EEEEecccccCCCCeEEEEECCCCcE
Confidence 677788999999999999888875321100 0001111 001 1444 44443 378999999887753
No 321
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=84.72 E-value=26 Score=32.76 Aligned_cols=199 Identities=10% Similarity=-0.011 Sum_probs=100.9
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTC 99 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~ 99 (352)
.....+++|++.+ +.++.+=...+.|..+++...... ...+.. .-.....+++.+.++ +.++-...+.|.
T Consensus 39 ~~~~~~ld~~~~~-----~~ly~sD~~~~~I~r~~~~g~~~~---~~v~~~-~~~~P~GlAvD~~~~~ly~~d~~~~~I~ 109 (619)
T 3s94_A 39 LEDAAAVDFVFSH-----GLIYWSDVSEEAIKRTEFNKTESV---QNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIE 109 (619)
T ss_dssp CSCEEEEEEETTT-----TEEEEEETTTTEEEEEEC-----C---EEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEEEeCC-----CEEEEEECCCCeEEEEEccCCCce---EEEEeC-CCCCcCeEEEEecCCEEEEEeCCCCEEE
Confidence 3456688888754 345555445677777776543110 111111 113567899998555 555555678888
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC--CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR--DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
+.+..+..... .....-...+.|++.|.+..|+-+.. ...|...++. +.....+ ....-.....+++.+++..
T Consensus 110 v~~~dG~~~~~--l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l--~~~~~~~P~Glald~~~~~ 184 (619)
T 3s94_A 110 VSNLDGSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFII--INSEIYWPNGLTLDYEEQK 184 (619)
T ss_dssp EEETTSCSCEE--EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEE--ECSSCSSEEEEEEETTTTE
T ss_pred EEECCCCCEEE--EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEEE--EeCCCCCCcEEEEEccCCE
Confidence 88765543221 12233455788999886554444443 3455555543 2222211 1122334578899987665
Q ss_pred EEEE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 178 LFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 178 l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
|..+ ...+.|...+...... ..+......| ..+|++..+ ..+.+-...+.|...|.
T Consensus 185 LY~aD~~~~~I~~~~~dG~~~------~~~~~~~~~~---P~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 185 LYWADAKLNFIHKSNLDGTNR------QAVVKGSLPH---PFALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEEEETTTCCEEEESSSCCEE------C------------CCCEEESSS-EEEEECTTTCSEEEEES
T ss_pred EEEEeCCCCeEEEecCCCCcc------EEEEeCCCCC---ceEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 5544 4456777776543211 1111101112 235666555 44445445566766664
No 322
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=84.58 E-value=18 Score=30.94 Aligned_cols=104 Identities=12% Similarity=0.096 Sum_probs=58.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeec---cccCCeeEEEECCC----CcEEEEeeC---C----Cc
Q 018675 76 TVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLE---GHENEVKSVSWNAS----GTLLATCGR---D----KS 141 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~---~h~~~v~~v~~~~~----~~~l~s~~~---d----~~ 141 (352)
....++|.|+|+++++ ..++.|.+++ ..+. ..+..+. .-......++++|+ +.+.++-+. + ..
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4578899999986655 5568898885 3443 3333221 12346789999997 444444432 3 55
Q ss_pred EEEEecCCCC-e---eEEE-EEeec-CccCeeEEEEcCCCCEEEEEe
Q 018675 142 VWIWEVMPGN-E---FECV-SVLQG-HAQDVKMVQWHPTMDVLFSCS 182 (352)
Q Consensus 142 v~vwd~~~~~-~---~~~~-~~~~~-h~~~v~~~~~~~~~~~l~s~~ 182 (352)
|..++..... . .+.+ ..+.. .......+.|.|++.+.++.+
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6666654321 1 1111 11221 111245789999998766644
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=83.20 E-value=20 Score=30.35 Aligned_cols=96 Identities=10% Similarity=0.102 Sum_probs=46.4
Q ss_pred cEEEEeeCC-CeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC-C---------CcEEEEEccCCce
Q 018675 40 PVFASCSGD-KTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF-D---------ATTCIWEDVGGDY 108 (352)
Q Consensus 40 ~~l~s~s~D-~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d---------~~i~i~~~~~~~~ 108 (352)
.+++.||.+ ..+.++|..+....|.............-.++.+ ++++++.|+. + +.+.+||..+..+
T Consensus 21 ~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 21 TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 456666543 4677777764333354322111000011111222 5777777776 2 3577888777665
Q ss_pred eeeEeec-cccCCeeEEEECCCCcEEEEeeCC
Q 018675 109 ECVATLE-GHENEVKSVSWNASGTLLATCGRD 139 (352)
Q Consensus 109 ~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d 139 (352)
..+..+. .....-.++. .++.+++.|+.+
T Consensus 99 ~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred EECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 5443332 1111122222 456777777754
No 324
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=81.77 E-value=29 Score=31.10 Aligned_cols=115 Identities=13% Similarity=0.092 Sum_probs=60.8
Q ss_pred CCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEee---------cCccCeeEEEEcCC----CCEEEEEeC-
Q 018675 119 NEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQ---------GHAQDVKMVQWHPT----MDVLFSCSY- 183 (352)
Q Consensus 119 ~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~----~~~l~s~~~- 183 (352)
...+.++|.|++. .++.+...|.|++++.........+..+. ........++++|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3567899999986 44455678999998742111001111111 11345778999996 333333322
Q ss_pred -C----------CcEEEEecCCCCC-----CCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCC
Q 018675 184 -D----------NTIKVWWAEDTDS-----DNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDD 235 (352)
Q Consensus 184 -d----------~~i~iw~~~~~~~-----~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~d 235 (352)
+ ..|.-|.....+. ...+.+..+......|. -..|.|.|||.++++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeCCC
Confidence 1 1333344432111 11223333322233453 5689999999988876654
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=81.37 E-value=49 Score=33.57 Aligned_cols=194 Identities=14% Similarity=0.158 Sum_probs=96.2
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeC-CCeEEEEecCCCceeeeeeeeeec-ceecceEEEEECCCCCEEEEEeCCCcE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSG-DKTVRIWEQSASSRFWNCKAVLEE-MHTRTVRSCAWSPSGKLLATASFDATT 98 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~-D~~v~~w~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~~i 98 (352)
.+.|.|+++.|........+++|.|.+ |++++|+++.+-..... ..+.. .-...|.-+.+ ....+|..|-.||.+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~--~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l 629 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHK--EMLGGEIIPRSILMTTF-ESSHYLLCALGDGAL 629 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEE--EECCSSCCEEEEEEEEE-TTEEEEEEEETTSEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEE--EECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeE
Confidence 458999998874311112478999987 99999999975433211 11110 11223333344 234578889999987
Q ss_pred EEEEc--cCCceeeeE-eeccccCCeeEEEECCCCc-EEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeE-EEEcC
Q 018675 99 CIWED--VGGDYECVA-TLEGHENEVKSVSWNASGT-LLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKM-VQWHP 173 (352)
Q Consensus 99 ~i~~~--~~~~~~~~~-~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~ 173 (352)
.-+.. .++...-.. ..-| ..++.=..+...+. .++++| ++...++.-. ++ .. ...+ ....+.. ..|+.
T Consensus 630 ~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~-l~-~s~l--~~~~v~~~~~F~s 702 (1158)
T 3ei3_A 630 FYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HK-LV-FSNV--NLKEVNYMCPLNS 702 (1158)
T ss_dssp EEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SS-EE-EEEB--SSSCCCEEEEECC
T ss_pred EEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-Cc-eE-Eecc--ChHHhceEeccCc
Confidence 65543 333322211 1112 33454444433333 333333 4444444322 21 11 1111 1122333 24543
Q ss_pred C--CCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEe
Q 018675 174 T--MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCS 233 (352)
Q Consensus 174 ~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~ 233 (352)
. ...++.. .++.++|..+... ..+ ..+++. -+..+..++++|+.+.++.+.
T Consensus 703 e~~~~g~v~~-~~~~LrI~~i~~~--~~~-~~~~ip-----L~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 703 DGYPDSLALA-NNSTLTIGTIDEI--QKL-HIRTVP-----LYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp SSSTTEEEEE-CSSCEEEEEECCS--SSE-EEEEEE-----CSSEEEEEEEEGGGTEEEEEE
T ss_pred ccCCCcEEEE-cCCceEEEEeccc--CCe-eEEEEe-----CCCCceEEEEcCCCCEEEEEE
Confidence 2 2344433 4566999876433 222 222221 235688899999877655544
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=76.94 E-value=34 Score=29.17 Aligned_cols=109 Identities=12% Similarity=0.174 Sum_probs=55.7
Q ss_pred cceEEEEEccCCCCCCCcc-EEEEeeCCCeEEEEecCCCce--eeeeeeeeecceecceEEEEECCC----CCEEEEEeC
Q 018675 22 DRVWSLAWKPTAGVDGVAP-VFASCSGDKTVRIWEQSASSR--FWNCKAVLEEMHTRTVRSCAWSPS----GKLLATASF 94 (352)
Q Consensus 22 ~~V~~i~~~p~~~~~~~~~-~l~s~s~D~~v~~w~~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~~----~~~l~s~~~ 94 (352)
..-++|+|.|+ +. +++ +...+.|++++...... +..... +..........++|+|+ +.+.++-..
T Consensus 18 ~~P~~i~~~pd------G~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lYv~~~~ 89 (353)
T 2g8s_A 18 DHPWALAFLPD------NHGMLI-TLRGGELRHWQAGKGLSAPLSGVPD-VWAHGQGGLLDVVLAPDFAQSRRIWLSYSE 89 (353)
T ss_dssp SSEEEEEECST------TCCEEE-EETTTEEEEEETTTEECCCCBSCCC-CCCSTTCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCcEEEEEcCC------CCEEEE-EeCCceEEEEeCCCceeeEecCCcc-cccCCCCCceeEEECCCCCCCCEEEEEEeC
Confidence 45578999997 45 454 45678998887532110 000000 10111245688999995 555555433
Q ss_pred -------CCcEEEEEccCC--ce---eeeE-eecc---ccCCeeEEEECCCCcEEEEeeC
Q 018675 95 -------DATTCIWEDVGG--DY---ECVA-TLEG---HENEVKSVSWNASGTLLATCGR 138 (352)
Q Consensus 95 -------d~~i~i~~~~~~--~~---~~~~-~~~~---h~~~v~~v~~~~~~~~l~s~~~ 138 (352)
...|..++.... .. +.+. .+.. .......+.|.|+|.+.++.+.
T Consensus 90 ~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 90 VGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp ECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred CCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 124555544322 11 1111 1110 1112357999999977666543
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=74.68 E-value=35 Score=28.25 Aligned_cols=177 Identities=10% Similarity=0.128 Sum_probs=79.5
Q ss_pred eEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeC----CC-------cEEEEEccCCceeeeEeecccc
Q 018675 50 TVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASF----DA-------TTCIWEDVGGDYECVATLEGHE 118 (352)
Q Consensus 50 ~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----d~-------~i~i~~~~~~~~~~~~~~~~h~ 118 (352)
.+..||..+.+ |.... ... ............++.+++.|+. ++ .+..||..+..+..+..+....
T Consensus 25 ~~~~yd~~~~~--W~~~~-~~~-~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 100 (318)
T 2woz_A 25 AAVAYDPMENE--CYLTA-LAE-QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSAR 100 (318)
T ss_dssp EEEEEETTTTE--EEEEE-ECT-TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCB
T ss_pred ceEEECCCCCc--eeccc-CCc-cCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccc
Confidence 37778876553 33211 100 0111122334557888888883 12 1566777666654443332211
Q ss_pred CCeeEEEECCCCcEEEEeeCC-------CcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC------CC
Q 018675 119 NEVKSVSWNASGTLLATCGRD-------KSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY------DN 185 (352)
Q Consensus 119 ~~v~~v~~~~~~~~l~s~~~d-------~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------d~ 185 (352)
.....+.+ ++.+++.|+.+ ..+.++|.... ....+..+....... ++.. .++.+++.|+. ..
T Consensus 101 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~ 175 (318)
T 2woz_A 101 CLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAA-KWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTN 175 (318)
T ss_dssp CSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTT-EEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCC
T ss_pred cccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCC-CEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccc
Confidence 11122222 55677777654 34667776533 222221111000011 1112 35556666653 23
Q ss_pred cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCC-----cEEEEcCC
Q 018675 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDL-----TIKIWGAD 244 (352)
Q Consensus 186 ~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg-----~i~iwd~~ 244 (352)
.+.+||... ..|..+..+......|. ++.+ ++..++.||.++ .+.+||..
T Consensus 176 ~~~~yd~~~---~~W~~~~~~p~~r~~~~----~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 230 (318)
T 2woz_A 176 RVFIYNPKK---GDWKDLAPMKTPRSMFG----VAIH--KGKIVIAGGVTEDGLSASVEAFDLK 230 (318)
T ss_dssp CEEEEETTT---TEEEEECCCSSCCBSCE----EEEE--TTEEEEEEEEETTEEEEEEEEEETT
T ss_pred eEEEEcCCC---CEEEECCCCCCCcccce----EEEE--CCEEEEEcCcCCCCccceEEEEECC
Confidence 577776543 34554433322222222 1222 456666666433 35566653
No 328
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=72.26 E-value=64 Score=30.14 Aligned_cols=196 Identities=10% Similarity=-0.047 Sum_probs=108.9
Q ss_pred ccceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCC-EEEEEeCCCcEE
Q 018675 21 TDRVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGK-LLATASFDATTC 99 (352)
Q Consensus 21 ~~~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~ 99 (352)
.....+++|.+.+ +.++.+-..++.|..+++..... ...+.. .......+++.+.++ +.++-...+.|.
T Consensus 36 ~~~~~~l~~d~~~-----~~lywtD~~~~~I~r~~~~g~~~----~~v~~~-g~~~P~GlAvD~~~~~LY~tD~~~~~I~ 105 (628)
T 4a0p_A 36 VKEASALDFDVTD-----NRIYWTDISLKTISRAFMNGSAL----EHVVEF-GLDYPEGMAVDWLGKNLYWADTGTNRIE 105 (628)
T ss_dssp CSCEEEEEEETTT-----TEEEEEETTTTEEEEEETTSCSC----EEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEEECCC-----CEEEEEECCCCeEEEEECCCCCc----EEEEeC-CCCCcceEEEEeCCCEEEEEECCCCEEE
Confidence 3456789998864 35666666778888888764321 111111 113456788887554 455555567788
Q ss_pred EEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC--CCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCE
Q 018675 100 IWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR--DKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDV 177 (352)
Q Consensus 100 i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 177 (352)
+.+..+.....+ +...-...+.+++.|....|+-+.. ...|...++... ....+ ...-.....+++.+++..
T Consensus 106 v~~~dG~~~~~l--~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-~~~~l---~~~~~~P~GlalD~~~~~ 179 (628)
T 4a0p_A 106 VSKLDGQHRQVL--VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-ERTTL---VPNVGRANGLTIDYAKRR 179 (628)
T ss_dssp EEETTSTTCEEE--ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEE---ECSCSSEEEEEEETTTTE
T ss_pred EEecCCCcEEEE--EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC-ceEEE---ECCCCCcceEEEccccCE
Confidence 887654432211 2223345789999985444444442 456666665432 22222 123345678999987666
Q ss_pred EEEE-eCCCcEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 178 LFSC-SYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 178 l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
|..+ ...+.|...+...... .. +.. .......|++.. +..+++-...+.|...|.
T Consensus 180 LY~aD~~~~~I~~~d~dG~~~---~v---~~~----~l~~P~glav~~-~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 180 LYWTDLDTNLIESSNMLGLNR---EV---IAD----DLPHPFGLTQYQ-DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSC---EE---EEE----CCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCEEEEEcCCCCce---EE---eec----cCCCceEEEEEC-CEEEEecCCCCEEEEEEC
Confidence 5554 4566788887654321 11 111 112345677765 344555555677777763
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=70.29 E-value=74 Score=30.09 Aligned_cols=68 Identities=12% Similarity=0.176 Sum_probs=41.1
Q ss_pred CCCCEEEEEeCCC--cEEEEEccCCceeeeEe---eccccCCeeEEEECCC-CcEEEEeeC--C-----CcEEEEecCCC
Q 018675 84 PSGKLLATASFDA--TTCIWEDVGGDYECVAT---LEGHENEVKSVSWNAS-GTLLATCGR--D-----KSVWIWEVMPG 150 (352)
Q Consensus 84 ~~~~~l~s~~~d~--~i~i~~~~~~~~~~~~~---~~~h~~~v~~v~~~~~-~~~l~s~~~--d-----~~v~vwd~~~~ 150 (352)
.++++++.|+.++ .+.+||..+..+..+.. +........++.+... +.+++.||. + ..+.+||+...
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 4788888888665 68888887776654432 1111122233555544 667777765 2 35778887655
Q ss_pred C
Q 018675 151 N 151 (352)
Q Consensus 151 ~ 151 (352)
.
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 4
No 330
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=70.00 E-value=53 Score=28.26 Aligned_cols=188 Identities=11% Similarity=0.105 Sum_probs=84.4
Q ss_pred EEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECC--CCCEEEEEeCCC----cEEEEEccCCceeeeEe-
Q 018675 41 VFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSP--SGKLLATASFDA----TTCIWEDVGGDYECVAT- 113 (352)
Q Consensus 41 ~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~----~i~i~~~~~~~~~~~~~- 113 (352)
.|..+...| +.+++.......|..... ......|.++++.| .+.+.+.+ ..+ .|...++....+..+..
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~--~~~~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGP--VFLGHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSDDGGGNWTEATRP 99 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEE--ESTTSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEESSTTSCCEECSBC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCc--cCCCCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeCCCCCCceECCcc
Confidence 455566666 444443322222332111 11234689999998 55555543 334 34443333333332211
Q ss_pred --ecc--------ccCCeeEEEECCC--CcEEEEeeCCCcEEEEecCCCCeeEEEEEeec----------------CccC
Q 018675 114 --LEG--------HENEVKSVSWNAS--GTLLATCGRDKSVWIWEVMPGNEFECVSVLQG----------------HAQD 165 (352)
Q Consensus 114 --~~~--------h~~~v~~v~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~----------------h~~~ 165 (352)
+.. ....|.++.+.|. ...+..+...+.|...+ ..+.....+..... ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 110 1124778888862 44555555555444332 22333333211100 1124
Q ss_pred eeEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceeEee-eecc-CC----CCcccEEEEEEcCC-CCEEEEEeCCC
Q 018675 166 VKMVQWHPT-MDVLFSCSYDNTIKVWWAEDTDSDNWHCVQT-ISES-NN----GHSSTIWALSFNAK-GDKLVSCSDDL 236 (352)
Q Consensus 166 v~~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~-~~~~-~~----~h~~~i~~l~~~~~-~~~l~s~~~dg 236 (352)
+.++.+.|. ...++.+..++.|... .+ ...+|..... +... .. .....+.+|.++|. ...|..+...+
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s--~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFES--TD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEE--SS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEE--CC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 678888874 3445555444444332 22 2234433211 0000 00 00235889999986 34555565554
No 331
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=69.03 E-value=75 Score=29.66 Aligned_cols=180 Identities=9% Similarity=0.012 Sum_probs=101.5
Q ss_pred eCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCE-EEEEeCCCcEEEEEccCCceeeeEeeccccCCeeEE
Q 018675 46 SGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKL-LATASFDATTCIWEDVGGDYECVATLEGHENEVKSV 124 (352)
Q Consensus 46 s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v 124 (352)
+....|+.-++.+.... ..+....-..+..++|++.+.. ..+-..++.|..++..+.....+ +..-......+
T Consensus 12 s~~~~I~~i~l~~~~~~----~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v--~~~g~~~P~Gl 85 (628)
T 4a0p_A 12 SRRADIRRISLETNNNN----VAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHV--VEFGLDYPEGM 85 (628)
T ss_dssp EETTEEEEEESSCTTCE----EECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSCCCEE
T ss_pred EeCCcEEEEECCCCCcc----eEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEE--EeCCCCCcceE
Confidence 36678888888754321 1110111235788999986544 55555678888777655433222 22112356778
Q ss_pred EECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCce
Q 018675 125 SWNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWH 201 (352)
Q Consensus 125 ~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--d~~i~iw~~~~~~~~~~~ 201 (352)
++.+.+ ++.++-...+.|.+.++.... ...+ ....-.....+++.|....|+.+.. .+.|...++.....
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l--~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~---- 158 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVL--VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER---- 158 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTT-CEEE--ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCc-EEEE--EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce----
Confidence 887654 455555566788888875332 1211 1123345678999986555554442 45565555443221
Q ss_pred eEeeeeccCCCCcccEEEEEEcCCCCEEE-EEeCCCcEEEEcCC
Q 018675 202 CVQTISESNNGHSSTIWALSFNAKGDKLV-SCSDDLTIKIWGAD 244 (352)
Q Consensus 202 ~~~~~~~~~~~h~~~i~~l~~~~~~~~l~-s~~~dg~i~iwd~~ 244 (352)
..+.. .....+.|++++++..|. +=...+.|..++++
T Consensus 159 --~~l~~----~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 159 --TTLVP----NVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp --EEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred --EEEEC----CCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 11111 234578899999755544 44556788888765
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=66.45 E-value=84 Score=29.25 Aligned_cols=182 Identities=8% Similarity=-0.019 Sum_probs=95.3
Q ss_pred CCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEE-EEeCCCcEEEEEccCCceeeeEeeccccCCeeEEE
Q 018675 47 GDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLA-TASFDATTCIWEDVGGDYECVATLEGHENEVKSVS 125 (352)
Q Consensus 47 ~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~ 125 (352)
....|+.-++........ ... ..-.....++|++.+..|. +-...+.|..++..+... ....+..--.....++
T Consensus 16 ~~~~I~~i~~~~~~~~~~--~~~--~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~-~~~v~~~~~~~P~GlA 90 (619)
T 3s94_A 16 NRRDLRLVDATNGKENAT--IVV--GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQNVVVSGLLSPDGLA 90 (619)
T ss_dssp CSSBEEEECCC-----------C--BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEE
T ss_pred ccccEEEEeCCCCcceEE--EEE--cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc-eEEEEeCCCCCcCeEE
Confidence 456788877764321000 011 1124567889998665554 444456777776554321 1122222224678899
Q ss_pred ECCCC-cEEEEeeCCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCcee
Q 018675 126 WNASG-TLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSY--DNTIKVWWAEDTDSDNWHC 202 (352)
Q Consensus 126 ~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--d~~i~iw~~~~~~~~~~~~ 202 (352)
+.+.+ ++.++-...+.|.+.++... ....+ ....-.....+++.|....|+.+.. .+.|...++.....
T Consensus 91 vD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l--~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~----- 162 (619)
T 3s94_A 91 CDWLGEKLYWTDSETNRIEVSNLDGS-LRKVL--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR----- 162 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSC-SCEEE--ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----
T ss_pred EEecCCEEEEEeCCCCEEEEEECCCC-CEEEE--EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-----
Confidence 98854 45555566788999887532 22211 1123344567889887555554443 34554444432211
Q ss_pred EeeeeccCCCCcccEEEEEEcCCCCE-EEEEeCCCcEEEEcCCc
Q 018675 203 VQTISESNNGHSSTIWALSFNAKGDK-LVSCSDDLTIKIWGADI 245 (352)
Q Consensus 203 ~~~~~~~~~~h~~~i~~l~~~~~~~~-l~s~~~dg~i~iwd~~~ 245 (352)
..+.. ......+.|++++++.. +++=...+.|..++++.
T Consensus 163 -~~l~~---~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 163 -FIIIN---SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp -EEEEC---SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred -EEEEe---CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 11111 11345788999986554 44545567888887753
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=66.35 E-value=42 Score=28.57 Aligned_cols=109 Identities=6% Similarity=0.042 Sum_probs=61.8
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEE---CCCCCEEEEE-eCCCcEEEEEccCCceeeeEeec
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAW---SPSGKLLATA-SFDATTCIWEDVGGDYECVATLE 115 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~-~~d~~i~i~~~~~~~~~~~~~~~ 115 (352)
.+++.++.||.|.-.|..+++..|+.... ...++....- ..++..++.. +.||.+..++..++.......+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 46788899999999999999888876432 1012211110 0123333333 57899988886655322111111
Q ss_pred c--ccCCeeE---EEE-----CCCCcEEEEeeCCCcEEEEecCCCCe
Q 018675 116 G--HENEVKS---VSW-----NASGTLLATCGRDKSVWIWEVMPGNE 152 (352)
Q Consensus 116 ~--h~~~v~~---v~~-----~~~~~~l~s~~~d~~v~vwd~~~~~~ 152 (352)
. ...++.. ... ...+..+++++.++++...|+..++.
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 1 0111111 000 01456788999999999999887764
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=65.93 E-value=55 Score=26.97 Aligned_cols=137 Identities=7% Similarity=0.098 Sum_probs=65.9
Q ss_pred CCCEEEEEeCC--------CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC-C-----CcEEEEecCCC
Q 018675 85 SGKLLATASFD--------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR-D-----KSVWIWEVMPG 150 (352)
Q Consensus 85 ~~~~l~s~~~d--------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d-----~~v~vwd~~~~ 150 (352)
++++++.|+.+ ..+.+||..+..+..+..+......-.++. .++.+++.|+. + ..+.++|....
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 66777777742 357788877766554433322111122222 35567777765 2 46778887543
Q ss_pred CeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC-----cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCC
Q 018675 151 NEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAK 225 (352)
Q Consensus 151 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~ 225 (352)
....+..+.........+. -++.+++.|+.++ .+.+||.. ...|..+..+......|. .+.+ +
T Consensus 176 -~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~---~~~W~~~~~~p~~r~~~~----~~~~--~ 243 (315)
T 4asc_A 176 -EWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSIT---DNKWAPFEAFPQERSSLS----LVSL--V 243 (315)
T ss_dssp -EEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETT---TTEEEEECCCSSCCBSCE----EEEE--T
T ss_pred -eEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECC---CCeEEECCCCCCccccee----EEEE--C
Confidence 2222221111111111222 2556777777654 46667653 334655443322222221 2222 4
Q ss_pred CCEEEEEeCC
Q 018675 226 GDKLVSCSDD 235 (352)
Q Consensus 226 ~~~l~s~~~d 235 (352)
+..++.||.+
T Consensus 244 ~~l~v~GG~~ 253 (315)
T 4asc_A 244 GTLYAIGGFA 253 (315)
T ss_dssp TEEEEEEEEE
T ss_pred CEEEEECCcc
Confidence 5666667653
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=63.64 E-value=62 Score=26.71 Aligned_cols=112 Identities=13% Similarity=0.261 Sum_probs=53.7
Q ss_pred CCCEEEEEeCC-------CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEeeC------CCcEEEEecCCCC
Q 018675 85 SGKLLATASFD-------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATCGR------DKSVWIWEVMPGN 151 (352)
Q Consensus 85 ~~~~l~s~~~d-------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~------d~~v~vwd~~~~~ 151 (352)
++++++.|+.+ ..+.+||..+..+..+..+......-.++. .++.+++.|+. -..+.++|+...
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~- 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG- 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT-
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC-
Confidence 67788888764 246677777666554433221111111222 35666666654 235788887543
Q ss_pred eeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC-----cEEEEecCCCCCCCceeEe
Q 018675 152 EFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN-----TIKVWWAEDTDSDNWHCVQ 204 (352)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~~~~ 204 (352)
....+.......... ++.. -++.+++.|+.++ .+.+||.. ...|..+.
T Consensus 186 ~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~---~~~W~~~~ 238 (318)
T 2woz_A 186 DWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLK---TNKWEVMT 238 (318)
T ss_dssp EEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETT---TCCEEECC
T ss_pred EEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECC---CCeEEECC
Confidence 233222111111111 2222 2456667776543 45567653 33455443
No 336
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=62.00 E-value=88 Score=27.92 Aligned_cols=110 Identities=13% Similarity=0.052 Sum_probs=58.8
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEEccCCc-eeeeEeec---------cccCCeeEEEECCC----CcEEEEeeC--
Q 018675 76 TVRSCAWSPSGK-LLATASFDATTCIWEDVGGD-YECVATLE---------GHENEVKSVSWNAS----GTLLATCGR-- 138 (352)
Q Consensus 76 ~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~~~~-~~~~~~~~---------~h~~~v~~v~~~~~----~~~l~s~~~-- 138 (352)
.-..++|.|+|+ .|+++...|.|++++..... ...+..+. ........|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 346789999996 34445678999988643221 11122211 11356788999996 444444332
Q ss_pred C----------CcEEEEecCCC--C-----eeEEEEEee--cCccCeeEEEEcCCCCEEEEEeCCC
Q 018675 139 D----------KSVWIWEVMPG--N-----EFECVSVLQ--GHAQDVKMVQWHPTMDVLFSCSYDN 185 (352)
Q Consensus 139 d----------~~v~vwd~~~~--~-----~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~ 185 (352)
+ ..|.-|.+... . ..+.+..+. ........+.|.|++.+.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13333554321 1 112222221 1122457899999998777666543
No 337
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=61.91 E-value=99 Score=28.49 Aligned_cols=67 Identities=16% Similarity=0.097 Sum_probs=38.6
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeec----ceecceEEEEECCCCC-EEEEEe------CCCcEEEEEccCCc
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEE----MHTRTVRSCAWSPSGK-LLATAS------FDATTCIWEDVGGD 107 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~----~h~~~v~~~~~s~~~~-~l~s~~------~d~~i~i~~~~~~~ 107 (352)
..++.++.|+.|.-+|..+++..|+....-.. ....++.. .=..+|+ .+++++ .++.+..+|..+++
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~-~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIV-KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEE-ECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEe-CCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 46777788999999999999888875321100 01112110 0011233 455543 36788888877765
No 338
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.98 E-value=1.4e+02 Score=29.56 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=24.6
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.|.+++..++.. ++.|-+.|+++|||++.++
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCC
Confidence 567777777654 6779999999999998764
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=54.54 E-value=1.4e+02 Score=28.09 Aligned_cols=152 Identities=11% Similarity=0.114 Sum_probs=76.8
Q ss_pred CCCCEEEEEeCC----CcEEEEEccCCceeeeE-e-----eccccCCeeEEEECCCCcEEEEeeCCC------cEEEEec
Q 018675 84 PSGKLLATASFD----ATTCIWEDVGGDYECVA-T-----LEGHENEVKSVSWNASGTLLATCGRDK------SVWIWEV 147 (352)
Q Consensus 84 ~~~~~l~s~~~d----~~i~i~~~~~~~~~~~~-~-----~~~h~~~v~~v~~~~~~~~l~s~~~d~------~v~vwd~ 147 (352)
.++.+++.|+.+ +.+.+||..+..+..+. . +......-.++.+..++.+++.||.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 467788888754 35778887777665544 2 111111122333322677777777543 4677786
Q ss_pred CCCCeeEEEEEeecCccCeeEEEEcCCCCEEEEEeCCC--cEEEEecCCCCCCCceeEee---eeccCCCCcccEEEEEE
Q 018675 148 MPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDN--TIKVWWAEDTDSDNWHCVQT---ISESNNGHSSTIWALSF 222 (352)
Q Consensus 148 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~--~i~iw~~~~~~~~~~~~~~~---~~~~~~~h~~~i~~l~~ 222 (352)
... .+..+..+.. ...-.++....++.+++.|+.++ .+.+||... ..|..... ......+|. ++.+
T Consensus 476 ~t~-~W~~~~~~p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t---~~W~~~~~~g~~p~~r~~~~----a~v~ 546 (695)
T 2zwa_A 476 KTR-EWSMIKSLSH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE---EIFKDVTPKDEFFQNSLVSA----GLEF 546 (695)
T ss_dssp TTT-EEEECCCCSB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT---TEEEECCCSSGGGGSCCBSC----EEEE
T ss_pred CCC-cEEECCCCCC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCC---CceEEccCCCCCCCccccee----EEEE
Confidence 543 2222211111 11111223324677778887655 677886543 34544432 111222332 2444
Q ss_pred cCC-CCEEEEEeC--C-----CcEEEEcCC
Q 018675 223 NAK-GDKLVSCSD--D-----LTIKIWGAD 244 (352)
Q Consensus 223 ~~~-~~~l~s~~~--d-----g~i~iwd~~ 244 (352)
..+ +..++.||. + +.+.+||+.
T Consensus 547 ~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 547 DPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp ETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred eCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 544 666777765 2 346677754
No 340
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=46.89 E-value=1.4e+02 Score=25.57 Aligned_cols=156 Identities=15% Similarity=0.109 Sum_probs=81.2
Q ss_pred ceEEEEECCCCCEEEEEe-------CCCcEEEEEccCCceeeeEeeccccCCeeEEEEC--CCC-cEEEEeeCC---CcE
Q 018675 76 TVRSCAWSPSGKLLATAS-------FDATTCIWEDVGGDYECVATLEGHENEVKSVSWN--ASG-TLLATCGRD---KSV 142 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~-------~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~~-~~l~s~~~d---~~v 142 (352)
.|..-..+++.+.++..+ -.|.+.+|..+.+ ..+.++||....-.+... +.. .+|+.+... +++
T Consensus 153 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 229 (365)
T 2xzh_A 153 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 229 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT---EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEE
T ss_pred eEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc---ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 445556688888766543 2267888876654 344567775544333221 111 234433322 578
Q ss_pred EEEecCCC---C-e--eEEEEEeecC---ccCeeEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCC
Q 018675 143 WIWEVMPG---N-E--FECVSVLQGH---AQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGH 213 (352)
Q Consensus 143 ~vwd~~~~---~-~--~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h 213 (352)
.+-++... . . .+.+..+... .+--.++..++....+..-..-|.+.+||++... ++..-. --
T Consensus 230 hIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt-----~i~~nr----IS 300 (365)
T 2xzh_A 230 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT-----CIYMNR----IS 300 (365)
T ss_dssp EEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC-----EEEEEE----CC
T ss_pred EEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCc-----EEEEec----cC
Confidence 88887322 1 1 1112222111 2233467778877888888899999999886542 221111 01
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEcC
Q 018675 214 SSTIWALSFNAKGDKLVSCSDDLTIKIWGA 243 (352)
Q Consensus 214 ~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~ 243 (352)
...|..-+.+.+..-++.....|.|.--.+
T Consensus 301 ~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 301 GETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred CCceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 234544444444444555556665554433
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=46.71 E-value=74 Score=31.48 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=26.1
Q ss_pred ceEEEEEccCCCCCCCccEEEEeeCCCeEEEEecCCCcee
Q 018675 23 RVWSLAWKPTAGVDGVAPVFASCSGDKTVRIWEQSASSRF 62 (352)
Q Consensus 23 ~V~~i~~~p~~~~~~~~~~l~s~s~D~~v~~w~~~~~~~~ 62 (352)
.|.++...++ ..+++|-+.|+++|+|++.++...
T Consensus 237 ~~~~~~~~~~------~~~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLST------YNVLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETT------TTEEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCC------CcEEEEEECCCEEEEEECCCCCeE
Confidence 4566666654 358999999999999999887543
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=44.82 E-value=3e+02 Score=28.93 Aligned_cols=192 Identities=15% Similarity=0.178 Sum_probs=97.7
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeeccc--
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGH-- 117 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h-- 117 (352)
+.+|-- ..++++|+|+++..++.... .+..|.-=.|-.+. .|+..+ +..+..|+..+ +..+...+.-|
T Consensus 78 ~iiALr-ag~~lQiFnl~~k~klks~~------~~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~-~s~P~k~fdR~~~ 147 (1630)
T 1xi4_A 78 KVIALK-AGKTLQIFNIEMKSKMKAHT------MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEG-ESQPVKMFDRHSS 147 (1630)
T ss_pred ceEEEe-cCCeEEEeehHHhhhhcccc------cCCCceEEEecCCC-eeEEEc-CCeEEEeccCC-CCccHHHHhcchh
Confidence 455544 37899999998764332111 12345544554333 333222 35788998754 22343333323
Q ss_pred --cCCeeEEEECCCCcEEEEee-------CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc--CCCCEEEEEeC---
Q 018675 118 --ENEVKSVSWNASGTLLATCG-------RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH--PTMDVLFSCSY--- 183 (352)
Q Consensus 118 --~~~v~~v~~~~~~~~l~s~~-------~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~--- 183 (352)
...|..-.-+++.++++..| -.|.+.+|...... -..+.||......+... +....+++-..
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~----sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~ 223 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc----chhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence 23455555577777755332 23666777654321 22345665544333332 22222332221
Q ss_pred -CCcEEEEecCCC--CCCCcee-EeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 184 -DNTIKVWWAEDT--DSDNWHC-VQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 184 -d~~i~iw~~~~~--~~~~~~~-~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
.+.++|-++... ....+.+ ...+.....+-....-++..++....+..-+.-|.+.++|+..
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEeccc
Confidence 267888877543 1111111 1111111111223344678888877788888899999999864
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=43.07 E-value=1.3e+02 Score=30.35 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=23.6
Q ss_pred ceeEEEecCCCcceEEEecCCCeEEEEeeccC
Q 018675 320 DVNSVQWSPGERRLLASASDDGMIKIWELANT 351 (352)
Q Consensus 320 ~i~~~~~sp~~~~~l~s~~~Dg~i~iw~~~~~ 351 (352)
.+.+++..++.. ++.|-+.|+++|||++.++
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCCC
Confidence 455666666654 6779999999999998754
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=41.01 E-value=61 Score=29.94 Aligned_cols=79 Identities=10% Similarity=-0.020 Sum_probs=44.7
Q ss_pred EEEEcCCCCEEEEEe-CCCcEEEEcCCccccccCCCCccceeeEEeecccCcceEEEEecCCce-EEecCCCCeEEEEEc
Q 018675 219 ALSFNAKGDKLVSCS-DDLTIKIWGADITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSREGI-IASGAADDSVQFFVE 296 (352)
Q Consensus 219 ~l~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~v~~~~~ 296 (352)
.+..+|||++++.++ -+.++.++|++.............+.................|++++. +.+.--|..+.-|..
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEec
Confidence 478899999988765 588999999763211111111000000001111233456677777774 345567888888865
Q ss_pred c
Q 018675 297 S 297 (352)
Q Consensus 297 ~ 297 (352)
.
T Consensus 407 ~ 407 (638)
T 3sbq_A 407 E 407 (638)
T ss_dssp H
T ss_pred c
Confidence 4
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=39.93 E-value=3.6e+02 Score=28.41 Aligned_cols=141 Identities=18% Similarity=0.187 Sum_probs=72.9
Q ss_pred CCeEEEEecCCCceeeeeeeeeecce----ecceEEEEECCCCCEEEEEe-------CCCcEEEEEccCCceeeeEeecc
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMH----TRTVRSCAWSPSGKLLATAS-------FDATTCIWEDVGGDYECVATLEG 116 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~~-------~d~~i~i~~~~~~~~~~~~~~~~ 116 (352)
+..|--|++.... .+...+ ..| ...|..-.-+++.+.++..| -.|.+.+|....+ ..+.+.|
T Consensus 124 ~~aVyHW~~~~~s---~P~k~f-dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~---~sQ~ieg 196 (1630)
T 1xi4_A 124 DNAVYHWSMEGES---QPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEG 196 (1630)
T ss_pred CCeEEEeccCCCC---ccHHHH-hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc---cchhhhH
Confidence 5678888875422 111111 122 23455556678888776443 3477888876543 2344566
Q ss_pred ccCCeeEEEEC--CC-CcEEEEeeC---CCcEEEEecCCC----Cee--EEEEEeec---CccCeeEEEEcCCCCEEEEE
Q 018675 117 HENEVKSVSWN--AS-GTLLATCGR---DKSVWIWEVMPG----NEF--ECVSVLQG---HAQDVKMVQWHPTMDVLFSC 181 (352)
Q Consensus 117 h~~~v~~v~~~--~~-~~~l~s~~~---d~~v~vwd~~~~----~~~--~~~~~~~~---h~~~v~~~~~~~~~~~l~s~ 181 (352)
|.+....+... +. ...++.+.. .+++.+-++... +.+ +.+..+.. -...-.++..++....+..-
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~i 276 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI 276 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEE
Confidence 65544333332 11 123332222 257888777322 111 00111111 11222356667766777778
Q ss_pred eCCCcEEEEecCCC
Q 018675 182 SYDNTIKVWWAEDT 195 (352)
Q Consensus 182 ~~d~~i~iw~~~~~ 195 (352)
+.-|.+.+||+...
T Consensus 277 tk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 277 TKYGYIHLYDLETG 290 (1630)
T ss_pred ecCceEEEEecccc
Confidence 88999999987654
No 346
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=37.29 E-value=1.3e+02 Score=27.77 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=32.7
Q ss_pred EEEEECCCCCEEEEEeCC----------C--cEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEE
Q 018675 78 RSCAWSPSGKLLATASFD----------A--TTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLAT 135 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~~d----------~--~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 135 (352)
=-|.|+|.|++++.-..+ + .+.+.+..+++....... .-..+++.++|+|+++.|+.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcCeeECCCCCEEEE
Confidence 347899999976653322 1 223333344444333322 23467889999998876543
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=36.11 E-value=2.7e+02 Score=25.84 Aligned_cols=103 Identities=18% Similarity=0.137 Sum_probs=61.6
Q ss_pred EEEEECCCCCEEEEEe-CCCcEEEEEccC------Cce-----eeeEeeccccCCeeEEEECCCCcEEEEeeCCCcEEEE
Q 018675 78 RSCAWSPSGKLLATAS-FDATTCIWEDVG------GDY-----ECVATLEGHENEVKSVSWNASGTLLATCGRDKSVWIW 145 (352)
Q Consensus 78 ~~~~~s~~~~~l~s~~-~d~~i~i~~~~~------~~~-----~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~v~vw 145 (352)
..+.++|||++++.++ .+.++.+++... .+. ......+ -.-...-..|.++|+...|.--|..|.-|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 4678999999987665 478899998642 110 0111222 12345678899999766677789999999
Q ss_pred ecCCC------C-eeEEEEEeecCccCeeEEEE------cCCCCEEEEEe
Q 018675 146 EVMPG------N-EFECVSVLQGHAQDVKMVQW------HPTMDVLFSCS 182 (352)
Q Consensus 146 d~~~~------~-~~~~~~~~~~h~~~v~~~~~------~~~~~~l~s~~ 182 (352)
++... . ....+..+.-|.+ +-.+.- .|++++|++..
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred eccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEec
Confidence 98421 1 1123334443432 222222 46788888763
No 348
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=34.93 E-value=3e+02 Score=26.16 Aligned_cols=30 Identities=10% Similarity=0.195 Sum_probs=22.8
Q ss_pred CeeEEEECCCCcEEEEeeCCCcEEEEecCCCC
Q 018675 120 EVKSVSWNASGTLLATCGRDKSVWIWEVMPGN 151 (352)
Q Consensus 120 ~v~~v~~~~~~~~l~s~~~d~~v~vwd~~~~~ 151 (352)
.|.++.+ +..++++-+.|+++|+|++..+.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 3554443 36799999999999999997653
No 349
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=23.23 E-value=5e+02 Score=24.85 Aligned_cols=158 Identities=9% Similarity=0.131 Sum_probs=78.9
Q ss_pred ecceEEEEECCC-CCEEEEEeCCCcEEEEEccCCceeeeEeecc----ccCCeeEEEECCC-CcEEEEeeCCCc----EE
Q 018675 74 TRTVRSCAWSPS-GKLLATASFDATTCIWEDVGGDYECVATLEG----HENEVKSVSWNAS-GTLLATCGRDKS----VW 143 (352)
Q Consensus 74 ~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~----h~~~v~~v~~~~~-~~~l~s~~~d~~----v~ 143 (352)
...|.+++++|. ...+..+...+.+...++....+..+..... ....|.++++.|. ...++.+..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 357999999985 3555666777777666655544544322111 1246899999884 344444432211 23
Q ss_pred EEe-cCCCCeeEEEEEeec------CccCeeEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceeEeeeeccCCCCcc
Q 018675 144 IWE-VMPGNEFECVSVLQG------HAQDVKMVQWHPTM-DVLFSCSYDNTIKVWWAEDTDSDNWHCVQTISESNNGHSS 215 (352)
Q Consensus 144 vwd-~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (352)
||. ...+.....+..... ....+..++++|.. ..++.+...+. +|...+ .-.+|......... .....
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~D-gG~TW~~~~~~~~~-~~~~~ 169 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSD-RAKTWTNVTSIPDA-FTNGI 169 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESS-TTSSCEEETTSCCC-CSTTT
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECC-CCcccCCCccCccc-cCCCC
Confidence 443 233444444322100 00124567788753 35555554444 443333 23456544321100 01124
Q ss_pred cEEEEEEcCC-CCEEEEEeCC
Q 018675 216 TIWALSFNAK-GDKLVSCSDD 235 (352)
Q Consensus 216 ~i~~l~~~~~-~~~l~s~~~d 235 (352)
.+..|.++|. ...+..+..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 5788889885 3344444443
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=23.18 E-value=1.5e+02 Score=28.30 Aligned_cols=22 Identities=9% Similarity=0.292 Sum_probs=19.3
Q ss_pred cEEEEeeCCCeEEEEecCCCce
Q 018675 40 PVFASCSGDKTVRIWEQSASSR 61 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~ 61 (352)
.+++|-+.|+++|+|++.++..
T Consensus 232 ~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 232 RYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp TEEEEEETTCEEEEEETTTTEE
T ss_pred cEEEEEEcCCeEEEEEcCCCce
Confidence 5899999999999999988753
No 351
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=22.60 E-value=3.6e+02 Score=23.02 Aligned_cols=192 Identities=14% Similarity=0.166 Sum_probs=104.4
Q ss_pred cEEEEeeCCCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEeCCCcEEEEEccCCceeeeEeecccc-
Q 018675 40 PVFASCSGDKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATASFDATTCIWEDVGGDYECVATLEGHE- 118 (352)
Q Consensus 40 ~~l~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~h~- 118 (352)
+.+|--+ .++++++|+++..++.... ....|.-=.|-.+ +.|+... +..+.-|+..+ +..+...+.-|.
T Consensus 79 ~ViALra-g~~LQiFnletK~klks~~------~~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~-~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 79 KVIALKA-GKTLQIFNIEMKSKMKAHT------MTDDVTFWKWISL-NTVALVT-DNAVYHWSMEG-ESQPVKMFDRHSS 148 (365)
T ss_dssp SEEEEEE-TTEEEEEETTTTEEEEEEE------CSSCEEEEEECSS-SEEEEEE-SSEEEEEESST-TCCCEEEEECCGG
T ss_pred cEEEEec-CCeEEEechHHhhhhccee------cCCccEEEEecCC-CeEEEEc-CCcEEEEcccC-CCCCceeeecchh
Confidence 5555554 6899999999875432211 1345655556533 3333333 35788998764 223444443332
Q ss_pred ---CCeeEEEECCCCcEEEEee-------CCCcEEEEecCCCCeeEEEEEeecCccCeeEEEEc--CCCC-EEEEEeC--
Q 018675 119 ---NEVKSVSWNASGTLLATCG-------RDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWH--PTMD-VLFSCSY-- 183 (352)
Q Consensus 119 ---~~v~~v~~~~~~~~l~s~~-------~d~~v~vwd~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~-~l~s~~~-- 183 (352)
..|..-.-+++.++++..+ -.|.+.+|..... .-..+.+|......+... +... ++..+..
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~----~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc----ccceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3455555677878755433 1256677776432 223456776433322221 1112 2222222
Q ss_pred -CCcEEEEecCCC--CCCCc-eeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEcCCc
Q 018675 184 -DNTIKVWWAEDT--DSDNW-HCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADI 245 (352)
Q Consensus 184 -d~~i~iw~~~~~--~~~~~-~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i~iwd~~~ 245 (352)
.+.++|-++... ....+ ++...+.....+-....-++..++....+..-+.-|.+.+||++.
T Consensus 225 ~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleT 290 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 290 (365)
T ss_dssp TEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT
T ss_pred CCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEccc
Confidence 257888887543 11112 111122222223344455788898888888889999999999864
No 352
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=20.89 E-value=4.5e+02 Score=23.50 Aligned_cols=179 Identities=15% Similarity=0.105 Sum_probs=0.0
Q ss_pred CCeEEEEecCCCceeeeeeeeeecceecceEEEEECCCCCEEEEEe-------CCCcEEEEEccCCceeeeEeeccccCC
Q 018675 48 DKTVRIWEQSASSRFWNCKAVLEEMHTRTVRSCAWSPSGKLLATAS-------FDATTCIWEDVGGDYECVATLEGHENE 120 (352)
Q Consensus 48 D~~v~~w~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-------~d~~i~i~~~~~~~~~~~~~~~~h~~~ 120 (352)
+..|.-|+++......+.-......-...|..-..+++.+.++..+ -.|.+.+|..+. ...+.++||...
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---~~sQ~ieGhaa~ 200 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPIEGHAAS 200 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT---CCEEEECCSEEE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc---cccchheeeeee
Q ss_pred eeEEEE--CCCCcEEEEeeCC----CcEEEEecCCC------CeeEEEEEeecC---ccCeeEEEEcCCCCEEEEEeCCC
Q 018675 121 VKSVSW--NASGTLLATCGRD----KSVWIWEVMPG------NEFECVSVLQGH---AQDVKMVQWHPTMDVLFSCSYDN 185 (352)
Q Consensus 121 v~~v~~--~~~~~~l~s~~~d----~~v~vwd~~~~------~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~d~ 185 (352)
.-.+.. ++....+++-... +++.+-++... -..+.+..+... .+--.++..++....+..-..-|
T Consensus 201 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G 280 (494)
T 1bpo_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 280 (494)
T ss_dssp EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCc
Q ss_pred cEEEEecCCCCCCCceeEeeeeccCCCCcccEEEEEEcCCCCEEEEEeCCCcE
Q 018675 186 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTI 238 (352)
Q Consensus 186 ~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~~~dg~i 238 (352)
.+.+||++.. .++..-. -....|..-+.+.+..-++.....|.|
T Consensus 281 ~i~lyDleTg-----t~i~~nr----Is~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 281 YIHLYDLETG-----TCIYMNR----ISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp EEEEEETTTC-----CEEEEEE----CCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred eEEEEecccc-----eeeeeec----ccCCceEEecccCCCCcEEEEccCceE
No 353
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=20.68 E-value=4.6e+02 Score=24.22 Aligned_cols=60 Identities=13% Similarity=0.110 Sum_probs=35.0
Q ss_pred ceEEEEECCCCCEEEEEeCC------------CcEEEEEccCCceeeeEeeccccCCeeEEEECCCCcEEEEe
Q 018675 76 TVRSCAWSPSGKLLATASFD------------ATTCIWEDVGGDYECVATLEGHENEVKSVSWNASGTLLATC 136 (352)
Q Consensus 76 ~v~~~~~s~~~~~l~s~~~d------------~~i~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~ 136 (352)
....|.|+++|.+.+.-... +.+..++..+++....... ....+++.++|+|+++.|+.+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~-P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC-CCCccccCCEECCCCCEEEEE
Confidence 45678999999887732211 1333334444544333221 123568999999998876644
Done!