Query 018683
Match_columns 352
No_of_seqs 133 out of 223
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 04:27:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018683.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018683hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wmta_ g.3.7.2 (A:) Istx {Sco 27.1 15 0.0011 23.1 1.9 18 41-58 10-28 (41)
2 d1nyra1 c.51.1.1 (A:533-645) T 16.6 16 0.0011 27.2 0.3 9 115-123 2-10 (113)
3 d1dx5i1 g.3.11.1 (I:345-387) T 10.5 32 0.0023 22.2 0.4 8 92-99 10-17 (43)
4 d1f56a_ b.6.1.1 (A:) Plantacya 8.8 41 0.003 24.4 0.5 11 28-38 15-25 (91)
5 d1n8ma_ g.3.7.2 (A:) PI4, pota 8.4 58 0.0042 20.3 1.0 17 42-58 10-27 (38)
6 d2cbpa_ b.6.1.1 (A:) Plantacya 7.2 54 0.004 24.1 0.5 10 29-38 21-30 (96)
7 d1x5wa1 g.37.1.1 (A:8-35) Zinc 7.0 57 0.0042 19.0 0.5 9 92-100 6-14 (28)
8 d1dfna_ g.9.1.1 (A:) Defensin 6.9 53 0.0039 19.3 0.3 19 15-35 5-23 (30)
9 d1uhaa1 g.3.1.1 (A:1-42) Lecti 6.8 65 0.0048 20.5 0.7 8 89-96 35-42 (42)
10 d2fsja2 c.55.1.12 (A:1-164) Hy 6.0 74 0.0054 24.2 0.8 28 113-140 131-161 (164)
No 1
>d1wmta_ g.3.7.2 (A:) Istx {Scorpion (Opisthacanthus madagascariensis) [TaxId: 167108]}
Probab=27.12 E-value=15 Score=23.09 Aligned_cols=18 Identities=33% Similarity=0.879 Sum_probs=14.6
Q ss_pred HHHHHHHhhhc-CCCCCCc
Q 018683 41 FWACVKQCEET-GCVGQKC 58 (352)
Q Consensus 41 f~~Cv~~C~~~-~C~~~~~ 58 (352)
-.||-+.||+. ||...++
T Consensus 10 tsdcyepcekkyncarakc 28 (41)
T d1wmta_ 10 TSDCYEPCEKKYNCARAKC 28 (41)
T ss_dssp HHHHHHHHHHTTSCCCCEE
T ss_pred cccccchHHHhhchHHHHH
Confidence 35899999977 9988664
No 2
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=16.65 E-value=16 Score=27.19 Aligned_cols=9 Identities=22% Similarity=0.493 Sum_probs=7.2
Q ss_pred ccccccCcc
Q 018683 115 KYHGKWPFI 123 (352)
Q Consensus 115 QFhGKWPF~ 123 (352)
.|.||||+.
T Consensus 2 ~~~G~~P~~ 10 (113)
T d1nyra1 2 ETKGAFPTW 10 (113)
T ss_dssp HHTTCCCTT
T ss_pred CCCCCCCcc
Confidence 589999963
No 3
>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.49 E-value=32 Score=22.22 Aligned_cols=8 Identities=38% Similarity=1.422 Sum_probs=7.1
Q ss_pred CCCccccc
Q 018683 92 SDCRYNCM 99 (352)
Q Consensus 92 sdC~Y~Cm 99 (352)
++|.||||
T Consensus 10 ~~CE~qCq 17 (43)
T d1dx5i1 10 ANCEYQCQ 17 (43)
T ss_dssp CCCSSEEE
T ss_pred CCcceeee
Confidence 68999997
No 4
>d1f56a_ b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=8.82 E-value=41 Score=24.42 Aligned_cols=11 Identities=27% Similarity=0.344 Sum_probs=9.3
Q ss_pred CccccccCCCc
Q 018683 28 LGKYFYVNSWF 38 (352)
Q Consensus 28 ~~~~~~~gd~l 38 (352)
-|+.|+|||.|
T Consensus 15 ~~~~F~vGD~L 25 (91)
T d1f56a_ 15 RGKSFRAGDVL 25 (91)
T ss_dssp TTCCBCTTCEE
T ss_pred cCCCCcCCCEE
Confidence 47889999987
No 5
>d1n8ma_ g.3.7.2 (A:) PI4, potassium channel blocking toxin 4 {Scorpion (Pandinus imperator) [TaxId: 55084]}
Probab=8.45 E-value=58 Score=20.29 Aligned_cols=17 Identities=35% Similarity=1.105 Sum_probs=13.7
Q ss_pred HHHHHHhhhc-CCCCCCc
Q 018683 42 WACVKQCEET-GCVGQKC 58 (352)
Q Consensus 42 ~~Cv~~C~~~-~C~~~~~ 58 (352)
+||-.-|+++ +|.++++
T Consensus 10 kdCy~PC~k~TGc~nakC 27 (38)
T d1n8ma_ 10 RDCYRPCQKRTGCPNAKC 27 (38)
T ss_dssp HHHHHHHHHHHSSCCEEE
T ss_pred chhcchHHHhcCCCchHH
Confidence 6888999854 9998764
No 6
>d2cbpa_ b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]}
Probab=7.16 E-value=54 Score=24.10 Aligned_cols=10 Identities=30% Similarity=0.481 Sum_probs=8.6
Q ss_pred ccccccCCCc
Q 018683 29 GKYFYVNSWF 38 (352)
Q Consensus 29 ~~~~~~gd~l 38 (352)
++.|++||.|
T Consensus 21 ~~~F~vGD~L 30 (96)
T d2cbpa_ 21 GKRFRAGDIL 30 (96)
T ss_dssp TCCBCTTCEE
T ss_pred CCcEecCCEE
Confidence 5789999987
No 7
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.04 E-value=57 Score=19.01 Aligned_cols=9 Identities=44% Similarity=1.257 Sum_probs=7.1
Q ss_pred CCCccccch
Q 018683 92 SDCRYNCMV 100 (352)
Q Consensus 92 sdC~Y~Cm~ 100 (352)
+||.|.|.-
T Consensus 6 ~ecsyscss 14 (28)
T d1x5wa1 6 SECSYSCSS 14 (28)
T ss_dssp SSSSCEESS
T ss_pred cccccccCc
Confidence 489999963
No 8
>d1dfna_ g.9.1.1 (A:) Defensin HNP-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.93 E-value=53 Score=19.28 Aligned_cols=19 Identities=26% Similarity=0.597 Sum_probs=14.1
Q ss_pred hCCCcccCCCCCCCccccccC
Q 018683 15 AMPQCSFSESKPWLGKYFYVN 35 (352)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~g 35 (352)
-+|+|..||+.- |.-+|.|
T Consensus 5 ripac~agerry--gtc~y~g 23 (30)
T d1dfna_ 5 RIPACIAGERRY--GTCIYQG 23 (30)
T ss_dssp ESSCCCTTCCEE--EEEEETT
T ss_pred ecchhhcCccce--eeEEEec
Confidence 378999998874 6666665
No 9
>d1uhaa1 g.3.1.1 (A:1-42) Lectin-D {American pokeweed (Phytolacca americana) [TaxId: 3527]}
Probab=6.78 E-value=65 Score=20.52 Aligned_cols=8 Identities=50% Similarity=1.335 Sum_probs=6.3
Q ss_pred CCCCCCcc
Q 018683 89 DCLSDCRY 96 (352)
Q Consensus 89 ~C~sdC~Y 96 (352)
.|.++|+|
T Consensus 35 GCqsnC~y 42 (42)
T d1uhaa1 35 GCQSQCDY 42 (42)
T ss_dssp TCCBCTTT
T ss_pred cccccCCc
Confidence 58888887
No 10
>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=6.00 E-value=74 Score=24.22 Aligned_cols=28 Identities=18% Similarity=0.140 Sum_probs=22.7
Q ss_pred Cccccccc---CccccccccchHHHHHHHhH
Q 018683 113 PVKYHGKW---PFIRVYGIQEPASVAFSVLN 140 (352)
Q Consensus 113 i~QFhGKW---PF~Rv~GiQEp~SvlFSllN 140 (352)
..++.|+- -+.++.-+.||++++++++|
T Consensus 131 ~~~~~g~~~~i~I~~v~V~pQg~ga~~~~l~ 161 (164)
T d2fsja2 131 VTGPEGEVRQFNITRLIMRPQGVGAALYLLN 161 (164)
T ss_dssp EECGGGCEEEEEEEEEEEEETTHHHHHHHHH
T ss_pred EEeeCCeEEEEEEeEEEEecCCHHHHHHHHH
Confidence 45567775 56788999999999999887
Done!