BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018684
(352 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 184/316 (58%), Gaps = 40/316 (12%)
Query: 19 YRKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA 78
Y KGGYH V++GDLFNG RY RKLGWG FS VWL++D + +VA+K+ KSA + +
Sbjct: 5 YCKGGYHLVKIGDLFNG-RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTET 63
Query: 79 ALHEIEVLSAVADGDPS--NEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
AL EI +L +V + DP+ N + V++L+D FK +G NG H+CMV E LG LL+ I S
Sbjct: 64 ALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN 123
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVST-------IDPSKDPIR 189
Y+GL L V++I + +L GLDYLH + IIHTD+KPENILL + + R
Sbjct: 124 YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQR 183
Query: 190 SGLTPILERPEGSINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLD 249
SG P P GS +S A+ G L P +
Sbjct: 184 SGAPP----PSGSA-------------------------VSTAPATAGNF-LVNPLEPKN 213
Query: 250 GIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
++ K+ D GNAC +K F E+IQTRQYR+ EV++ +GY+ D+WS AC AFELATG
Sbjct: 214 AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 273
Query: 310 DMLFAPKSGQGFCEDE 325
D LF P SG+ + DE
Sbjct: 274 DYLFEPHSGEEYTRDE 289
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 184/316 (58%), Gaps = 40/316 (12%)
Query: 19 YRKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA 78
Y KGGYH V++GDLFNG RY RKLGWG FS VWL++D + +VA+K+ KSA + +
Sbjct: 21 YCKGGYHLVKIGDLFNG-RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTET 79
Query: 79 ALHEIEVLSAVADGDPS--NEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
AL EI +L +V + DP+ N + V++L+D FK +G NG H+CMV E LG LL+ I S
Sbjct: 80 ALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN 139
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVST-------IDPSKDPIR 189
Y+GL L V++I + +L GLDYLH + IIHTD+KPENILL + + R
Sbjct: 140 YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQR 199
Query: 190 SGLTPILERPEGSINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLD 249
SG P P GS +S A+ G L P +
Sbjct: 200 SGAPP----PSGSA-------------------------VSTAPATAGNF-LVNPLEPKN 229
Query: 250 GIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
++ K+ D GNAC +K F E+IQTRQYR+ EV++ +GY+ D+WS AC AFELATG
Sbjct: 230 AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 289
Query: 310 DMLFAPKSGQGFCEDE 325
D LF P SG+ + DE
Sbjct: 290 DYLFEPHSGEEYTRDE 305
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 244 bits (622), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 181/316 (57%), Gaps = 42/316 (13%)
Query: 19 YRKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA 78
Y KGGYH V++GDLFNG RY RKLGWG FS VWL +D + +VA+K+ KSA + +
Sbjct: 15 YCKGGYHPVKIGDLFNG-RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTET 73
Query: 79 ALHEIEVLSAVADGDPS--NEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
AL EI++L V + DPS N+ V++LID FK +G NG H+CMV E LG LL+ I S
Sbjct: 74 ALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSN 133
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV-------STIDPSKDPIR 189
Y+GL + V+ I + +L GLDYLH + IIHTD+KPENIL+ + + +
Sbjct: 134 YQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQK 193
Query: 190 SGLTPILERPEGSINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLD 249
+G P P GS + + +V P R D
Sbjct: 194 AGAPP----PSGSAVSTAPAADLLVN--------------------------PLDPRNAD 223
Query: 250 GIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
I R K+ D GNAC +K F E+IQTRQYR+ EV++ AGYS D+WS AC AFELATG
Sbjct: 224 KI--RVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATG 281
Query: 310 DMLFAPKSGQGFCEDE 325
D LF P SG+ + DE
Sbjct: 282 DYLFEPHSGEDYSRDE 297
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 207 bits (526), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 160/312 (51%), Gaps = 71/312 (22%)
Query: 19 YRKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA 78
YR GGYH G+ + RYI RKLGWG FS VWLA D +++VA+KI + + +A
Sbjct: 2 YRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA 61
Query: 79 ALHEIEVLSAVADGDPSNEKC-----VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIK 133
A EI++L V D D + E +++L+DHF H GPNG H+ MV E LG++LL LIK
Sbjct: 62 AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK 121
Query: 134 YSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193
++G+ L V++I K +L GLDY+HR GIIHTD+KPEN+L+
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM---------------- 165
Query: 194 PILERPEGSINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDM 253
I++ PE I I+ A +G
Sbjct: 166 EIVDSPENL--------------------------IQIKIADLG---------------- 183
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
NAC ++ + IQTR+YR+PEV+L A + D+WS AC FEL TGD LF
Sbjct: 184 --------NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
Query: 314 APKSGQGFCEDE 325
P G + +D+
Sbjct: 236 EPDEGHSYTKDD 247
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 160/312 (51%), Gaps = 71/312 (22%)
Query: 19 YRKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA 78
YR GG+H G+ + RYI RKLGWG FS VWLA D +++VA+KI + + +A
Sbjct: 2 YRPGGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA 61
Query: 79 ALHEIEVLSAVADGDPSNEKC-----VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIK 133
A EI++L V D D + E +++L+DHF H GPNG H+ MV E LG++LL LIK
Sbjct: 62 AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK 121
Query: 134 YSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193
++G+ L V++I K +L GLDY+HR GIIHTD+KPEN+L+
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM---------------- 165
Query: 194 PILERPEGSINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDM 253
I++ PE I I+ A +G
Sbjct: 166 EIVDSPENL--------------------------IQIKIADLG---------------- 183
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
NAC ++ + IQTR+YR+PEV+L A + D+WS AC FEL TGD LF
Sbjct: 184 --------NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
Query: 314 APKSGQGFCEDE 325
P G + +D+
Sbjct: 236 EPDEGHSYTKDD 247
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 126/289 (43%), Gaps = 60/289 (20%)
Query: 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLS 87
+ G L N ++ RK+G G F V L Y A+K+ ++ ++ ++A E ++L
Sbjct: 28 KKGMLLNNA-FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILK 86
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKV 145
+ + D +N V K+ G H+C++ E LG SL +I + Y G + +
Sbjct: 87 KIQNDDINNNNIV-------KYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDI 139
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP-IRSGLTPILERPEGSIN 204
+ C IL L+YL R++ + HTDLKPENILL DP L + +G
Sbjct: 140 KLYCIEILKALNYL-RKMSLTHTDLKPENILL-------DDPYFEKSLITVRRVTDGK-- 189
Query: 205 GGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264
I I R GI K++DFG A
Sbjct: 190 -----------------------KIQIYRTKSTGI----------------KLIDFGCAT 210
Query: 265 RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
+ I TRQYRAPEVIL G+ S DMWSF C EL TG +LF
Sbjct: 211 FKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 126/292 (43%), Gaps = 60/292 (20%)
Query: 23 GYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALH 81
G+ VGD RY LG G F V D R + VALKI K+ ++ +AA
Sbjct: 21 GHLIYHVGDWLQE-RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL 79
Query: 82 EIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLE 141
EI VL + + DP N+ +++ D F + G H+C+ E LG S +K + Y
Sbjct: 80 EINVLEKINEKDPDNKNLCVQMFDWFDYHG----HMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEG 201
+++VR + + + +LH + + HTDLKPENIL V++ LT LE+
Sbjct: 136 IHQVRHMAFQLCQAVKFLH-DNKLTHTDLKPENILFVNS--------DYELTYNLEKKRD 186
Query: 202 SINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVDFG 261
+ ST+ +VVDFG
Sbjct: 187 ERSVKSTAV---------------------------------------------RVVDFG 201
Query: 262 NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
+A ++ + + TR YRAPEVIL G+S D+WS C FE G LF
Sbjct: 202 SATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLF 253
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 126/285 (44%), Gaps = 60/285 (21%)
Query: 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLSA 88
GD+ + RY LG G F V D + +VA+KI K+ ++ +AA EI+VL
Sbjct: 9 GDVLSA-RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEH 67
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREI 148
+ DP++ +++++ F+H G H+C+V E LG S IK + + L+ +R++
Sbjct: 68 LNTTDPNSTFRCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRKM 123
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGST 208
I +++LH + HTDLKPENIL V + P ++R E ++
Sbjct: 124 AYQICKSVNFLHSN-KLTHTDLKPENILFVQS------DYTEAYNPKIKRDERTL----- 171
Query: 209 STMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268
I+ KVVDFG+A ++
Sbjct: 172 ------------------------------------------INPDIKVVDFGSATYDDE 189
Query: 269 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
+ + TR YRAPEVIL G+S D+WS C E G +F
Sbjct: 190 HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLSA 88
GD+ + RY LG G F V D + +VA+KI K+ ++ +AA EI+VL
Sbjct: 9 GDVLSA-RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEH 67
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREI 148
+ DP++ +++++ F+H G H+C+V E LG S IK + + L+ +R++
Sbjct: 68 LNTTDPNSTFRCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRKM 123
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGST 208
I +++LH + HTDLKPENIL V + P ++R E ++
Sbjct: 124 AYQICKSVNFLHSN-KLTHTDLKPENILFVQS------DYTEAYNPKIKRDERTL----- 171
Query: 209 STMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268
I+ KVVDFG+A ++
Sbjct: 172 ------------------------------------------INPDIKVVDFGSATYDDE 189
Query: 269 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
+ + R YRAPEVIL G+S D+WS C E G +F
Sbjct: 190 HHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 116/294 (39%), Gaps = 60/294 (20%)
Query: 21 KGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAA 79
K G+ R+GD RY LG G F V D R S VALKI ++ ++ +AA
Sbjct: 5 KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA 63
Query: 80 LHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG 139
EI VL + + D N+ + + D F G H+C+ E LG + +K + ++
Sbjct: 64 RLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQP 119
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERP 199
L VR + + L +LH E + HTDLKPENIL V+
Sbjct: 120 YPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN-------------------- 158
Query: 200 EGSINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVD 259
S + N SIR A D
Sbjct: 159 ---------SEFETLYNEHKSCEEKSVKNTSIRVA------------------------D 185
Query: 260 FGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
FG+A ++ + TR YR PEVIL G++ D+WS C FE G LF
Sbjct: 186 FGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 239
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 116/294 (39%), Gaps = 60/294 (20%)
Query: 21 KGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAA 79
K G+ R+GD RY LG G F V D R S VALKI ++ ++ +AA
Sbjct: 14 KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA 72
Query: 80 LHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG 139
EI VL + + D N+ + + D F G H+C+ E LG + +K + ++
Sbjct: 73 RLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQP 128
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERP 199
L VR + + L +LH E + HTDLKPENIL V+
Sbjct: 129 YPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN-------------------- 167
Query: 200 EGSINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVD 259
S + N SIR A D
Sbjct: 168 ---------SEFETLYNEHKSCEEKSVKNTSIRVA------------------------D 194
Query: 260 FGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
FG+A ++ + TR YR PEVIL G++ D+WS C FE G LF
Sbjct: 195 FGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 248
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 116/294 (39%), Gaps = 60/294 (20%)
Query: 21 KGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAA 79
K G+ R+GD RY LG G F V D R S VALKI ++ ++ +AA
Sbjct: 37 KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA 95
Query: 80 LHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG 139
EI VL + + D N+ + + D F G H+C+ E LG + +K + ++
Sbjct: 96 RLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQP 151
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERP 199
L VR + + L +LH E + HTDLKPENIL V+
Sbjct: 152 YPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN-------------------- 190
Query: 200 EGSINGGSTSTMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVD 259
S + N SIR A D
Sbjct: 191 ---------SEFETLYNEHKSCEEKSVKNTSIRVA------------------------D 217
Query: 260 FGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
FG+A ++ + TR YR PEVIL G++ D+WS C FE G LF
Sbjct: 218 FGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 271
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY + +G G F V AYD + +VALK+ ++ +F + A EI +L + D N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
VI ++++F H+CM E L +L LIK ++++G L VR+ IL L
Sbjct: 158 TMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 157 DYLHRELGIIHTDLKPENILL 177
D LH+ IIH DLKPENILL
Sbjct: 214 DALHKNR-IIHCDLKPENILL 233
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 243 KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L R KV+DFG++C +++ IQ+R YRAPEVIL A Y +DMWS
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 301 CTAFELATG 309
C EL TG
Sbjct: 287 CILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY + +G G F V AYD + +VALK+ ++ +F + A EI +L + D N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
VI ++++F H+CM E L +L LIK ++++G L VR+ IL L
Sbjct: 158 TMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 157 DYLHRELGIIHTDLKPENILL 177
D LH+ IIH DLKPENILL
Sbjct: 214 DALHKNR-IIHCDLKPENILL 233
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 243 KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L R KV+DFG++C +++ IQ+R YRAPEVIL A Y +DMWS
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 301 CTAFELATG 309
C EL TG
Sbjct: 287 CILAELLTG 295
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY + +G G F V AYD + +VALK+ ++ +F + A EI +L + D N
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
VI ++++F H+CM E L +L LIK ++++G L VR+ IL L
Sbjct: 158 TMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 157 DYLHRELGIIHTDLKPENILL 177
D LH+ IIH DLKPENILL
Sbjct: 214 DALHKNR-IIHCDLKPENILL 233
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 243 KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L R KV+DFG++C +++ IQ+R YRAPEVIL A Y +DMWS
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 301 CTAFELATG 309
C EL TG
Sbjct: 287 CILAELLTG 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY +G G F V AYD +VA+KI K+ F A E+ +L + D
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 95
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
+ ++ L HF HLC+V E L +L L++ + ++G+ LN R+ + + T L
Sbjct: 96 KYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 157 DYLHR-ELGIIHTDLKPENILLVSTIDPSKDPIR 189
+L EL IIH DLKPENILL +P + I+
Sbjct: 152 LFLATPELSIIHCDLKPENILLC---NPKRSAIK 182
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 243 KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L R K+VDFG++C+ ++ + IQ+R YR+PEV+L Y ++DMWS
Sbjct: 167 KPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG 226
Query: 301 CTAFELATGDMLFA 314
C E+ TG+ LF+
Sbjct: 227 CILVEMHTGEPLFS 240
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY +G G F V AYD +VA+KI K+ F A E+ +L + D
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
+ ++ L HF HLC+V E L +L L++ + ++G+ LN R+ + + T L
Sbjct: 115 KYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 157 DYLHR-ELGIIHTDLKPENILLVSTIDPSKDPIR 189
+L EL IIH DLKPENILL +P + I+
Sbjct: 171 LFLATPELSIIHCDLKPENILLC---NPKRSAIK 201
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 243 KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L R K+VDFG++C+ ++ + IQ+R YR+PEV+L Y ++DMWS
Sbjct: 186 KPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG 245
Query: 301 CTAFELATGDMLFA 314
C E+ TG+ LF+
Sbjct: 246 CILVEMHTGEPLFS 259
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY +G G F V AYD +VA+KI K+ F A E+ +L + D
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
+ ++ L HF HLC+V E L +L L++ + ++G+ LN R+ + + T L
Sbjct: 115 KYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 157 DYLHR-ELGIIHTDLKPENILL 177
+L EL IIH DLKPENILL
Sbjct: 171 LFLATPELSIIHCDLKPENILL 192
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 243 KPERCL--DGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L + K+VDFG++C+ ++ + IQ+R YR+PEV+L Y ++DMWS
Sbjct: 186 KPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG 245
Query: 301 CTAFELATGDMLFA 314
C E+ TG+ LF+
Sbjct: 246 CILVEMHTGEPLFS 259
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F E+ TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 213 CIMGEMIKGGVLF 225
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A+ F + TR YRAPEVIL GY +VD+WS
Sbjct: 151 KPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 210
Query: 301 CTAFELATGDMLF 313
C EL G ++F
Sbjct: 211 CIMGELVKGSVIF 223
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V+V D RY + +G G IV A+DT VA+K Q A+
Sbjct: 8 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 67
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ +L V N K +I L++ F + Q + +V+E + +L ++I
Sbjct: 68 AYRELVLLKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---- 117
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 118 HMELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 159
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 213 CIMGEMIKGGVLF 225
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKVV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 18/146 (12%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAAL-HEIEVLSAVADGDPSNEKCVI 101
LG G FS V LA D RT VA+K I K A + + ++ +EI VL + ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI------KHPNIV 79
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
L D ++ G HL ++++ + G+ R+++ Y E + R I + +L + YL
Sbjct: 80 ALDDIYESGG----HLYLIMQLVSGGELFDRIVEKGFYT--ERDASRLIFQ-VLDAVKYL 132
Query: 160 HRELGIIHTDLKPENILLVSTIDPSK 185
H +LGI+H DLKPEN+L S + SK
Sbjct: 133 H-DLGIVHRDLKPENLLYYSLDEDSK 157
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 32/77 (41%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICF 335
T Y APEV+ + YS +VD WS A+ L G F ++ E + F
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 336 FVDPLQHDIRDVINSCM 352
+ D + +D I M
Sbjct: 241 YWDDISDSAKDFIRHLM 257
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 213 CIMGEMIKGGVLF 225
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKVV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 213 CIMGEMIKGGVLF 225
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAAL-HEIEVLSAVADGDPSNEKCVI 101
LG G FS V LA D RT VA+K I K A + + ++ +EI VL + + ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN------IV 79
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
L D ++ G HL ++++ + G+ R+++ Y E + R I + +L + YL
Sbjct: 80 ALDDIYESGG----HLYLIMQLVSGGELFDRIVEKGFYT--ERDASRLIFQ-VLDAVKYL 132
Query: 160 HRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSI 203
H +LGI+H DLKPEN+L S + SK I +E P GS+
Sbjct: 133 H-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSV 174
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 32/77 (41%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICF 335
T Y APEV+ + YS +VD WS A+ L G F ++ E + F
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 336 FVDPLQHDIRDVINSCM 352
+ D + +D I M
Sbjct: 241 YWDDISDSAKDFIRHLM 257
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 19/164 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAAL-HEIEVLSAVADGDPSNEKCVI 101
LG G FS V LA D RT VA+K I K A + + ++ +EI VL + ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI------KHPNIV 79
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
L D ++ G HL ++++ + G+ R+++ Y E + R I + +L + YL
Sbjct: 80 ALDDIYESGG----HLYLIMQLVSGGELFDRIVEKGFYT--ERDASRLIFQ-VLDAVKYL 132
Query: 160 HRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSI 203
H +LGI+H DLKPEN+L S + SK I +E P GS+
Sbjct: 133 H-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSV 174
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 32/77 (41%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICF 335
T Y APEV+ + YS +VD WS A+ L G F ++ E + F
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 336 FVDPLQHDIRDVINSCM 352
+ D + +D I M
Sbjct: 241 YWDDISDSAKDFIRHLM 257
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 18/146 (12%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAAL-HEIEVLSAVADGDPSNEKCVI 101
LG G FS V LA D RT VA+K I K A + + ++ +EI VL + ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI------KHPNIV 79
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
L D ++ G HL ++++ + G+ R+++ Y E + R I + +L + YL
Sbjct: 80 ALDDIYESGG----HLYLIMQLVSGGELFDRIVEKGFYT--ERDASRLIFQ-VLDAVKYL 132
Query: 160 HRELGIIHTDLKPENILLVSTIDPSK 185
H +LGI+H DLKPEN+L S + SK
Sbjct: 133 H-DLGIVHRDLKPENLLYYSLDEDSK 157
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 32/77 (41%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICF 335
T Y APEV+ + YS +VD WS A+ L G F ++ E + F
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 336 FVDPLQHDIRDVINSCM 352
+ D + +D I M
Sbjct: 241 YWDDISDSAKDFIRHLM 257
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F E+ TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 213 CIMGEMVCHKILF 225
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 213 CIMGEMIKGGVLF 225
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 213 CIMGEMIKGGVLF 225
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 213 CIMGEMIKGGVLF 225
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 214 CIMGEMIKGGVLF 226
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 7 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 66
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 67 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 120
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 121 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 162
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F E+ TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 213 CIMGEMVCHKILF 225
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L A Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADG 92
RY ++G G + V+ A D + +VALK + + + E+ +L +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQ-HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ N V+RL+D + + + + +V E + L + + GL ++++ +
Sbjct: 64 EHPN---VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
L GLD+LH I+H DLKPENIL+ S
Sbjct: 121 FLRGLDFLHANC-IVHRDLKPENILVTS 147
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L K+ DFG A + Q A + + T YRAPEV+L++ Y+ VDMWS
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 301 CTAFELATGDMLF 313
C E+ LF
Sbjct: 199 CIFAEMFRRKPLF 211
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADG 92
RY ++G G + V+ A D + +VALK + + + E+ +L +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQ-HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ N V+RL+D + + + + +V E + L + + GL ++++ +
Sbjct: 64 EHPN---VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
L GLD+LH I+H DLKPENIL+ S
Sbjct: 121 FLRGLDFLHANC-IVHRDLKPENILVTS 147
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L K+ DFG A + Q A + T YRAPEV+L++ Y+ VDMWS
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 301 CTAFELATGDMLF 313
C E+ LF
Sbjct: 199 CIFAEMFRRKPLF 211
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 18/147 (12%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQ--FAQAALHEIEVLSAVA 90
RY LG GQF+ V+ A D T+ VA+K +S A+ + AL EI++L ++
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 91 DGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICK 150
+ +I L+D F H ++ +V +F+ L +IK + L + ++
Sbjct: 71 HPN------IIGLLDAFGHKS----NISLVFDFMETDLEVIIKDNSLV-LTPSHIKAYML 119
Query: 151 YILTGLDYLHRELGIIHTDLKPENILL 177
L GL+YLH+ I+H DLKP N+LL
Sbjct: 120 MTLQGLEYLHQHW-ILHRDLKPNNLLL 145
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP L + K+ DFG A N+ + ++ TR YRAPE++ A Y VDMW+
Sbjct: 139 KPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWA 198
Query: 299 FACTAFEL 306
C EL
Sbjct: 199 VGCILAEL 206
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A +A+ + + TR YRAPEVIL Y+ +VD+WS C
Sbjct: 155 KPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGC 214
Query: 302 TAFELATGDMLF 313
E+ TG LF
Sbjct: 215 IMAEMITGKTLF 226
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCV 100
+G G + V A D RT + VA+K Q FA+ A E+ +L + + V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM------RHENV 86
Query: 101 IRLIDHFK--HAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
I L+D F + +V+ F+G L +L+K+ + L ++++ + +L GL Y
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK---LGEDRIQFLVYQMLKGLRY 143
Query: 159 LHRELGIIHTDLKPENI 175
+H GIIH DLKP N+
Sbjct: 144 IH-AAGIIHRDLKPGNL 159
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADG 92
RY ++G G + V+ A D + +VALK + + + E+ +L +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQ-HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ N V+RL+D + + + + +V E + L + + GL ++++ +
Sbjct: 64 EHPN---VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
L GLD+LH I+H DLKPENIL+ S
Sbjct: 121 FLRGLDFLHANC-IVHRDLKPENILVTS 147
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L K+ DFG A + Q A + T YRAPEV+L++ Y+ VDMWS
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 301 CTAFELATGDMLF 313
C E+ LF
Sbjct: 199 CIFAEMFRRKPLF 211
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 155 KPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVG 214
Query: 301 CTAFELATGDMLF 313
C E+ G +LF
Sbjct: 215 CIMGEMIKGGVLF 227
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 8 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 68 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 121
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 122 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 163
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 20 RKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQA 78
R+ Y + DLF I +RKLG G F V L + + +K I K +Q
Sbjct: 11 RENLYFQGTIDDLF-----IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME 65
Query: 79 ALH-EIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIK-Y 134
+ EIEVL ++ D N +I++ + F+ + ++ +V+E G+ L R++
Sbjct: 66 QIEAEIEVLKSL---DHPN---IIKIFEVFE----DYHNMYIVMETCEGGELLERIVSAQ 115
Query: 135 SRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR---SG 191
+R K L V E+ K ++ L Y H + ++H DLKPENIL T S PI+ G
Sbjct: 116 ARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHS--PIKIIDFG 172
Query: 192 LTPILERPEGSINGGSTS 209
L + + E S N T+
Sbjct: 173 LAELFKSDEHSTNAAGTA 190
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 213 CIMGEMVRHKILF 225
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 70 AYRELVLMKXV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME- 122
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 123 ---LDHERMSYLLYQMLXGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 181 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGC 240
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 241 IMAELLTGRTLF 252
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V +YD ++ +A+K Q A+ E+ +L +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 107
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 108 --KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 162
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 163 ILRGLKYIH-SADIIHRDLKPSNL 185
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + A + TR YRAPE++L Y+ +VD+WS C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 208 IMAELLTGRTLF 219
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 74
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 75 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 129
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 130 ILRGLKYIHSA-DIIHRDLKPSNL 152
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A N + TR YRAPEVIL GY+ +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C EL G ++F
Sbjct: 213 CIMGELVKGCVIF 225
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V V D RY + +G G IV A+DT VA+K Q A+
Sbjct: 10 FYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 69
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ +L V N K +I L++ F + Q + +V+E + +L ++I
Sbjct: 70 AYRELVLLKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---- 119
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 HMELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A A+ + + TR YRAPEVIL Y+ +VD+WS C
Sbjct: 171 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 230
Query: 302 TAFELATGDMLFAPK 316
E+ TG LF K
Sbjct: 231 IMAEMLTGKTLFKGK 245
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDP 94
Y++ +G G + V A D R+ VA+K Q FA+ A E+ +L +
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM----- 98
Query: 95 SNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELN--KVREICK 150
+ VI L+D F A N +V+ F+ L +++ G+E + K++ +
Sbjct: 99 -QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKIQYLVY 151
Query: 151 YILTGLDYLHRELGIIHTDLKPENI 175
+L GL Y+H G++H DLKP N+
Sbjct: 152 QMLKGLKYIHSA-GVVHRDLKPGNL 175
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 213 CIMGEMVRHKILF 225
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 70 AYRELVLMKXV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME- 122
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 213 CIMGEMVRHKILF 225
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 70 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME- 122
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 123 ---LDHERMSYLLYQMLXGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + A + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A A+ + + TR YRAPEVIL Y+ +VD+WS C
Sbjct: 153 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 212
Query: 302 TAFELATGDMLFAPK 316
E+ TG LF K
Sbjct: 213 IMAEMLTGKTLFKGK 227
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDP 94
Y++ +G G + V A D R+ VA+K Q FA+ A E+ +L +
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM----- 80
Query: 95 SNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELN--KVREICK 150
+ VI L+D F A N +V+ F+ L +++ GL+ + K++ +
Sbjct: 81 -QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GLKFSEEKIQYLVY 133
Query: 151 YILTGLDYLHRELGIIHTDLKPENI 175
+L GL Y+H G++H DLKP N+
Sbjct: 134 QMLKGLKYIHSA-GVVHRDLKPGNL 157
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 146 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 206 CIMGEMVRHKILF 218
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 63 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME- 115
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 116 ---LDHERMSYLLYQMLXGIKHLH-SAGIIHRDLKPSNIVVKS 154
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + A + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 163 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 223 IMAELLTGRTLF 234
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 89
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 90 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 144
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 145 ILRGLKYIHSA-DIIHRDLKPSNL 167
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 213 CIMGEMVRHKILF 225
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 70 AYRELVLMKXV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 122
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 157 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 217 IMAELLTGRTLF 228
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 83
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 84 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 138
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 139 ILRGLKYIHSA-DIIHRDLKPSNL 161
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 157 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 217 IMAELLTGRTLF 228
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 83
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 84 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 138
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 139 ILRGLKYIHSA-DIIHRDLKPSNL 161
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGD 93
G Y + LG G F V LAY T T VALKI +K A+ E E+
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
P +I+L D K + + MV+E+ G+ L I R K E + R + I+
Sbjct: 74 PH----IIKLYDVIK----SKDEIIMVIEYAGNELFDYI-VQRDKMSE-QEARRFFQQII 123
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ ++Y HR I+H DLKPEN+LL
Sbjct: 124 SAVEYCHRH-KIVHRDLKPENLLL 146
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 158 KPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 218 IMAELLTGRTLF 229
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 84
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 85 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 139
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 140 ILRGLKYIHSA-DIIHRDLKPSNL 162
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGD 93
G Y + LG G F V LAY T T VALKI +K A+ E E+
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
P +I+L D K + + MV+E+ G+ L I R K E + R + I+
Sbjct: 64 PH----IIKLYDVIK----SKDEIIMVIEYAGNELFDYI-VQRDKMSE-QEARRFFQQII 113
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ ++Y HR I+H DLKPEN+LL
Sbjct: 114 SAVEYCHRH-KIVHRDLKPENLLL 136
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 34/157 (21%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS------AAQFAQAALH---EIEVLSA 88
YI + LG G V LA++ +T VA+KI +A+ A AL+ EIE+L
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVR 146
+ N C+I++ + F + + +VLE + G+ +++ R K
Sbjct: 72 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKRLK-------E 113
Query: 147 EICKY----ILTGLDYLHRELGIIHTDLKPENILLVS 179
CK +L + YLH E GIIH DLKPEN+LL S
Sbjct: 114 ATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 149
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVILR---AGY 290
KPE L D K+ DFG++ K E R Y APEV++ AGY
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHS----KILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 291 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEV 326
+ +VD WS F +G F+ Q +D++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 154 KPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 214 IMAELLTGRTLF 225
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 80
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 81 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 135
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 136 ILRGLKYIHSA-DIIHRDLKPSNL 158
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 34/157 (21%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS------AAQFAQAALH---EIEVLSA 88
YI + LG G V LA++ +T VA+KI +A+ A AL+ EIE+L
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVR 146
+ N C+I++ + F + + +VLE + G+ +++ R K
Sbjct: 78 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKRLK-------E 119
Query: 147 EICKY----ILTGLDYLHRELGIIHTDLKPENILLVS 179
CK +L + YLH E GIIH DLKPEN+LL S
Sbjct: 120 ATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 155
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVILR---AGY 290
KPE L D K+ DFG++ K E R Y APEV++ AGY
Sbjct: 147 KPENVLLSSQEEDCLIKITDFGHS----KILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 202
Query: 291 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEV 326
+ +VD WS F +G F+ Q +D++
Sbjct: 203 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 238
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGD 93
G Y + LG G F V LAY T T VALKI +K A+ E E+
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
P +I+L D K + + MV+E+ G+ L I R K E + R + I+
Sbjct: 73 PH----IIKLYDVIK----SKDEIIMVIEYAGNELFDYI-VQRDKMSE-QEARRFFQQII 122
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ ++Y HR I+H DLKPEN+LL
Sbjct: 123 SAVEYCHRH-KIVHRDLKPENLLL 145
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGD 93
G Y + LG G F V LAY T T VALKI +K A+ E E+
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
P +I+L D K + + MV+E+ G+ L I R K E + R + I+
Sbjct: 68 PH----IIKLYDVIK----SKDEIIMVIEYAGNELFDYI-VQRDKMSE-QEARRFFQQII 117
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ ++Y HR I+H DLKPEN+LL
Sbjct: 118 SAVEYCHRH-KIVHRDLKPENLLL 140
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D +++DFG A +A+++ + TR YRAPE++L Y+ +VD+WS C
Sbjct: 158 KPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 302 TAFELATGDMLF 313
EL G LF
Sbjct: 218 IMAELLQGKALF 229
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEK 98
R +G G + V AYD R VA+K Q A+ E+ +L + +
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHL------KHE 87
Query: 99 CVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
VI L+D F A + + +V +G L ++K + L V+ + +L GL
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLLRGL 144
Query: 157 DYLHRELGIIHTDLKPENI 175
Y+H GIIH DLKP N+
Sbjct: 145 KYIH-SAGIIHRDLKPSNV 162
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 34/157 (21%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS------AAQFAQAALH---EIEVLSA 88
YI + LG G V LA++ +T VA+KI +A+ A AL+ EIE+L
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVR 146
+ N C+I++ + F + + +VLE + G+ +++ R K
Sbjct: 72 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKRLK-------E 113
Query: 147 EICKY----ILTGLDYLHRELGIIHTDLKPENILLVS 179
CK +L + YLH E GIIH DLKPEN+LL S
Sbjct: 114 ATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 149
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVILR---AGY 290
KPE L D K+ DFG++ K E R Y APEV++ AGY
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHS----KILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 291 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEV 326
+ +VD WS F +G F+ Q +D++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 34/157 (21%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS------AAQFAQAALH---EIEVLSA 88
YI + LG G V LA++ +T VA+KI +A+ A AL+ EIE+L
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVR 146
+ N C+I++ + F + + +VLE + G+ +++ R K
Sbjct: 71 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKRLK-------E 112
Query: 147 EICKY----ILTGLDYLHRELGIIHTDLKPENILLVS 179
CK +L + YLH E GIIH DLKPEN+LL S
Sbjct: 113 ATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 148
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVILR---AGY 290
KPE L D K+ DFG++ K E R Y APEV++ AGY
Sbjct: 140 KPENVLLSSQEEDCLIKITDFGHS----KILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 195
Query: 291 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEV 326
+ +VD WS F +G F+ Q +D++
Sbjct: 196 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 231
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 34/157 (21%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS------AAQFAQAALH---EIEVLSA 88
YI + LG G V LA++ +T VA+KI +A+ A AL+ EIE+L
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVR 146
+ N C+I++ + F + + +VLE + G+ +++ R K
Sbjct: 72 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKRLK-------E 113
Query: 147 EICKY----ILTGLDYLHRELGIIHTDLKPENILLVS 179
CK +L + YLH E GIIH DLKPEN+LL S
Sbjct: 114 ATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 149
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVILR---AGY 290
KPE L D K+ DFG++ K E R Y APEV++ AGY
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHS----KILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 291 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEV 326
+ +VD WS F +G F+ Q +D++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 232 IMAELLTGRTLF 243
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 98
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 99 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 153
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 154 ILRGLKYIHSA-DIIHRDLKPSNL 176
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D +++DFG A +A+++ + TR YRAPE++L Y+ +VD+WS C
Sbjct: 158 KPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 302 TAFELATGDMLF 313
EL G LF
Sbjct: 218 IMAELLQGKALF 229
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEK 98
R +G G + V AYD R VA+K Q A+ E+ +L + +
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHL------KHE 87
Query: 99 CVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
VI L+D F A + + +V +G L ++K + L V+ + +L GL
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGL 144
Query: 157 DYLHRELGIIHTDLKPENI 175
Y+H GIIH DLKP N+
Sbjct: 145 KYIH-SAGIIHRDLKPSNV 162
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
E+ G +LF
Sbjct: 213 VIMGEMIKGGVLF 225
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKVV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 218 IMAELLTGRTLF 229
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 84
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 85 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 139
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 140 ILRGLKYIHSA-DIIHRDLKPSNL 162
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSA 88
+G L G + +K+G G F + L + T+ YVA+K++ ++ Q L E
Sbjct: 2 MGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL-EYRFYKQ 60
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREI 148
+ GD I + GP G++ MVLE LG SL L + L V I
Sbjct: 61 LGSGDG---------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMI 110
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILL 177
+++ ++Y+H + +I+ D+KPEN L+
Sbjct: 111 AIQLISRMEYVHSK-NLIYRDVKPENFLI 138
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSA 88
+G L G + +K+G G F + L + T+ YVA+K++ ++ Q L E
Sbjct: 23 MGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL-EYRFYKQ 81
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREI 148
+ GD I + GP G++ MVLE LG SL L + L V I
Sbjct: 82 LGSGDG---------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMI 131
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILL 177
+++ ++Y+H + +I+ D+KPEN L+
Sbjct: 132 AIQLISRMEYVHSK-NLIYRDVKPENFLI 159
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 218 IMAELLTGRTLF 229
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 84
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 85 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 139
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 140 ILRGLKYIHSA-DIIHRDLKPSNL 162
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 175 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 235 IMAELLTGRTLF 246
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 101
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 102 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 156
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 157 ILRGLKYIHSA-DIIHRDLKPSNL 179
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 150 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 210 IMAELLTGRTLF 221
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 76
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 77 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 131
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 132 ILRGLKYIHSA-DIIHRDLKPSNL 154
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 232 IMAELLTGRTLF 243
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 98
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 99 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 153
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 154 ILRGLKYIHSA-DIIHRDLKPSNL 176
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 171 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 231 IMAELLTGRTLF 242
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 97
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 98 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 152
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 153 ILRGLKYIHSA-DIIHRDLKPSNL 175
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 149 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 209 IMAELLTGRTLF 220
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 75
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 76 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 130
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 131 ILRGLKYIHSA-DIIHRDLKPSNL 153
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 208 IMAELLTGRTLF 219
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 74
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 75 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 129
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 130 ILRGLKYIHSA-DIIHRDLKPSNL 152
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 157 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 217 IMAELLTGRTLF 228
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 83
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 84 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 138
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 139 ILRGLKYIHSA-DIIHRDLKPSNL 161
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 149 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 209 IMAELLTGRTLF 220
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 75
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 76 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 130
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 131 ILRGLKYIHSA-DIIHRDLKPSNL 153
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 224 IMAELLTGRTLF 235
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM---- 90
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 91 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 145
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 146 ILRGLKYIHSA-DIIHRDLKPSNL 168
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 171 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 231 IMAELLTGRTLF 242
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 97
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 98 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 152
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 153 ILRGLKYIHSA-DIIHRDLKPSNL 175
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
E+ G +LF
Sbjct: 213 VIMGEMIKGGVLF 225
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 66 HAKRAYRELVLMKVV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 214 IMAELLTGRTLF 225
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 80
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 81 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 135
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 136 ILRGLKYIHSA-DIIHRDLKPSNL 158
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 218 IMAELLTGRTLF 229
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 84
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 85 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 139
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 140 ILRGLKYIHSA-DIIHRDLKPSNL 162
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 232 IMAELLTGRTLF 243
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 98
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 99 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 153
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 154 ILRGLKYIHSA-DIIHRDLKPSNL 176
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 158 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVG 217
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 218 CIMGEMVCHKILF 230
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 20 RKGGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--- 74
R +++V +GD RY + +G G IV AYD VA+K Q
Sbjct: 11 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 70
Query: 75 FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLI 132
A+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I
Sbjct: 71 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 124
Query: 133 KYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
+ L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 125 QME----LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 166
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 208 IMAELLTGRTLF 219
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 74
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 75 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 129
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 130 ILRGLKYIHSA-DIIHRDLKPSNL 152
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 163 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 223 IMAELLTGRTLF 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 89
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 90 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 144
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 145 ILRGLKYIHSA-DIIHRDLKPSNL 167
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 208 IMAELLTGRTLF 219
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 74
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K ++ L + V+ +
Sbjct: 75 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK---LTDDHVQFLIYQ 129
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 130 ILRGLKYIHSA-DIIHRDLKPSNL 152
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 224 IMAELLTGRTLF 235
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 90
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 91 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 145
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 146 ILRGLKYIHSA-DIIHRDLKPSNL 168
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 214 IMAELLTGRTLF 225
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 80
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 81 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 135
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 136 ILRGLKYIHSA-DIIHRDLKPSNL 158
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 224 IMAELLTGRTLF 235
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 90
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 91 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 145
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 146 ILRGLKYIHSA-DIIHRDLKPSNL 168
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 214 IMAELLTGRTLF 225
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 80
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 81 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 135
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 136 ILRGLKYIHSA-DIIHRDLKPSNL 158
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 157 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 217 IMAELLTGRTLF 228
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 83
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 84 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 138
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 139 ILRGLKYIHSA-DIIHRDLKPSNL 161
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVG 206
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 207 CIMGEMVCHKILF 219
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 22 GGYHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FA 76
+++V +GD RY + +G G IV AYD VA+K Q A
Sbjct: 2 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 61
Query: 77 QAALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKY 134
+ A E+ ++ V N K +I L++ F + + Q + +V+E + +L ++I+
Sbjct: 62 KRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 115
Query: 135 SRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 116 E----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 155
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 151 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 210
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 211 IMAELLTGRTLF 222
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 77
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 78 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 132
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 133 ILRGLKYIHSA-DIIHRDLKPSNL 155
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 162 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 221
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 222 IMAELLTGRTLF 233
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 88
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 89 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 143
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 144 ILRGLKYIHSA-DIIHRDLKPSNL 166
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 219 IMAELLTGRTLF 230
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 85
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 86 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 140
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 141 ILRGLKYIHSA-DIIHRDLKPSNL 163
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 206 CIMGEMVRHKILF 218
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 63 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 115
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 116 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 154
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 207 CIMGEMVRHKILF 219
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 64 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 116
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 117 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 155
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 214 CIMGEMVRHKILF 226
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 70
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 71 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 123
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 124 ---LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 162
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 207 CIMGEMVRHKILF 219
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 64 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 116
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 117 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 155
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 213 CIMGEMVRHKILF 225
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 70 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 122
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 152 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 211
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 212 CIMGEMVRHKILF 224
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 9 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 68
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 69 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 121
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 122 ---LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 160
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 214 CIMGEMVRHKILF 226
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 70
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 71 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 123
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 124 ---LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 162
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 213 CIMGEMVRHKILF 225
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 70 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 122
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 161
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 251 CIMGEMVRHKILF 263
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 107
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 108 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 160
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 161 ---LDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKS 199
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 175 KPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 235 IMAELLTGRTLF 246
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 101
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 102 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 156
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 157 ILRGLKYIHSA-DIIHRDLKPSNL 179
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAV 89
G L G + +K+G G F + L + T+ YVA+K++ ++ Q L E +
Sbjct: 3 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL-EYRFYKQL 61
Query: 90 ADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREIC 149
GD I + GP G++ MVLE LG SL L + L V I
Sbjct: 62 GSGDG---------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIA 111
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILL 177
+++ ++Y+H + +I+ D+KPEN L+
Sbjct: 112 IQLISRMEYVHSK-NLIYRDVKPENFLI 138
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D +++DFG A +A+++ + TR YRAPE++L Y+ +VD+WS C
Sbjct: 150 KPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 302 TAFELATGDMLF 313
EL G LF
Sbjct: 210 IMAELLQGKALF 221
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEK 98
R +G G + V AYD R VA+K Q A+ E+ +L + +
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHL------KHE 79
Query: 99 CVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
VI L+D F A + + +V +G L ++K + L V+ + +L GL
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGL 136
Query: 157 DYLHRELGIIHTDLKPENI 175
Y+H GIIH DLKP N+
Sbjct: 137 KYIH-SAGIIHRDLKPSNV 154
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP + D K++DFG A A F + TR YRAPEVIL GY +VD+WS
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 301 CTAFELATGDMLF 313
C E+ +LF
Sbjct: 251 CIMGEMVRHKILF 263
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 24 YHAVRVGD--LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQA 78
+++V VGD RY + +G G IV AYD VA+K Q A+
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 107
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHF--KHAGPNGQHLCMVLEFLGDSLLRLIKYSR 136
A E+ ++ V N K +I L++ F + Q + +V+E + +L ++I+
Sbjct: 108 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 160
Query: 137 YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
L+ ++ + +L G+ +LH GIIH DLKP NI++ S
Sbjct: 161 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 199
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
Query: 41 QRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAAL-HEIEVLSAVADGDPSNEK 98
+ LG G FS V LA + T A+K I K A + ++++ +EI VL + +
Sbjct: 27 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI------KHE 80
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK-VREICKYILTGLD 157
++ L D ++ PN +L M L G+ R+++ KG K + + +L +
Sbjct: 81 NIVALEDIYE--SPNHLYLVMQLVSGGELFDRIVE----KGFYTEKDASTLIRQVLDAVY 134
Query: 158 YLHRELGIIHTDLKPENILLVSTIDPSK 185
YLHR +GI+H DLKPEN+L S + SK
Sbjct: 135 YLHR-MGIVHRDLKPENLLYYSQDEESK 161
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICF 335
T Y APEV+ + YS +VD WS A+ L G F ++ E + F
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSP 244
Query: 336 FVDPLQHDIRDVINSCM 352
+ D + +D I + M
Sbjct: 245 YWDDISDSAKDFIRNLM 261
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADG 92
RY QR LG G F V L D T A+K+ Q ++ L E+++L +
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 107
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLE-FLGDSLLRLIKYSRYKGLELNKVREICKY 151
D N +++L + F+ G + +V E + G L I SR + E++ R I +
Sbjct: 108 DHPN---IMKLYEFFEDKG----YFYLVGEVYTGGELFDEI-ISRKRFSEVDAAR-IIRQ 158
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186
+L+G+ Y+H+ I+H DLKPEN+LL S SKD
Sbjct: 159 VLSGITYMHKN-KIVHRDLKPENLLLES---KSKD 189
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVA---DG 92
RY ++G G + V+ A D + +VALK + I + VA
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQ-HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ V+RL+D + + + + +V E + L + + GL ++++ +
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
L GLD+LH I+H DLKPENIL+ S
Sbjct: 129 FLRGLDFLHANC-IVHRDLKPENILVTS 155
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L K+ DFG A + Q A + T YRAPEV+L++ Y+ VDMWS
Sbjct: 147 KPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVG 206
Query: 301 CTAFELATGDMLF 313
C E+ LF
Sbjct: 207 CIFAEMFRRKPLF 219
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADG 92
RY QR LG G F V L D T A+K+ Q ++ L E+++L +
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 106
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLE-FLGDSLLRLIKYSRYKGLELNKVREICKY 151
D N +++L + F+ G + +V E + G L I SR + E++ R I +
Sbjct: 107 DHPN---IMKLYEFFEDKG----YFYLVGEVYTGGELFDEI-ISRKRFSEVDAAR-IIRQ 157
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186
+L+G+ Y+H+ I+H DLKPEN+LL S SKD
Sbjct: 158 VLSGITYMHKN-KIVHRDLKPENLLLES---KSKD 188
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 34/157 (21%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS------AAQFAQAALH---EIEVLSA 88
YI + LG G V LA++ +T VA++I +A+ A AL+ EIE+L
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVR 146
+ N C+I++ + F + + +VLE + G+ +++ R K
Sbjct: 197 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKRLK-------E 238
Query: 147 EICKY----ILTGLDYLHRELGIIHTDLKPENILLVS 179
CK +L + YLH E GIIH DLKPEN+LL S
Sbjct: 239 ATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 274
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVILR---AGY 290
KPE L D K+ DFG++ K E R Y APEV++ AGY
Sbjct: 266 KPENVLLSSQEEDCLIKITDFGHS----KILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 321
Query: 291 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEV 326
+ +VD WS F +G F+ Q +D++
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 219 IMAELLTGRTLF 230
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 85
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 86 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 140
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 141 ILRGLKYIHSA-DIIHRDLKPSNL 163
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 26/169 (15%)
Query: 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEI------ 83
GD +Y + ++G G + +V LAY+ ++Y A+K+ QA
Sbjct: 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGT 66
Query: 84 ---------------EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSL 128
+V +A + V++L++ PN HL MV E +
Sbjct: 67 RPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLD--DPNEDHLYMVFELVNQG- 123
Query: 129 LRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+++ K L ++ R + ++ G++YLH + IIH D+KP N+L+
Sbjct: 124 -PVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLV 170
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRAGYSFS---VDM 296
KP L G D K+ DFG + ++ + + T + APE + FS +D+
Sbjct: 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDV 223
Query: 297 WSFACTAFELATGDMLF 313
W+ T + G F
Sbjct: 224 WAMGVTLYCFVFGQCPF 240
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 219 IMAELLTGRTLF 230
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY +G G + V A+DT+T VA+K K + F Q+ +H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPF-QSIIHAKRTYRELRLLKHMK 86
Query: 97 EKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT 154
+ VI L+D F A + +V +G L ++K + L + V+ + IL
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILR 143
Query: 155 GLDYLHRELGIIHTDLKPENI 175
GL Y+H IIH DLKP N+
Sbjct: 144 GLKYIHSA-DIIHRDLKPSNL 163
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADG 92
RY QR LG G F V L D T A+K+ Q ++ L E+++L +
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 83
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLE-FLGDSLLRLIKYSRYKGLELNKVREICKY 151
D N +++L + F+ G + +V E + G L I SR + E++ R I +
Sbjct: 84 DHPN---IMKLYEFFEDKG----YFYLVGEVYTGGELFDEI-ISRKRFSEVDAAR-IIRQ 134
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186
+L+G+ Y+H+ I+H DLKPEN+LL S SKD
Sbjct: 135 VLSGITYMHKN-KIVHRDLKPENLLLES---KSKD 165
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++D+G A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG A + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 219 IMAELLTGRTLF 230
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 85
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 86 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 140
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 141 ILRGLKYIHSA-DIIHRDLKPSNL 163
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 117/312 (37%), Gaps = 65/312 (20%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFA-----QAALHEIEVLSAVAD 91
RY + +G G + V AYD VA+K K F + L EI +L+ +
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK--KILRVFEDLIDCKRILREIAILNRL-- 109
Query: 92 GDPSNEKCVIRLID-HFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICK 150
N V++++D L +VLE +L + Y L ++ +
Sbjct: 110 ----NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY--LTELHIKTLLY 163
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTST 210
+L G+ Y+H GI+H DLKP N L+ D S GL ++ PE NG S
Sbjct: 164 NLLVGVKYVH-SAGILHRDLKPANCLV--NQDCSVKVCDFGLARTVDYPE---NGNSQ-- 215
Query: 211 MTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270
IS R M +V F + +Q
Sbjct: 216 ----------------LPISPREDDMN-------------------LVTFPHTKNLKRQL 240
Query: 271 AEEIQTRQYRAPEVI-LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWF 329
+ TR YRAPE+I L+ Y+ ++D+WS C EL L K + D F
Sbjct: 241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL-----LNMIKENVAYHADRGPLF 295
Query: 330 CIFICFFVDPLQ 341
CF + P Q
Sbjct: 296 PGSSCFPLSPDQ 307
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 34/157 (21%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS------AAQFAQAALH---EIEVLSA 88
YI + LG G V LA++ +T VA++I +A+ A AL+ EIE+L
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVR 146
+ N C+I++ + F + + +VLE + G+ +++ R K
Sbjct: 211 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKRLK-------E 252
Query: 147 EICKY----ILTGLDYLHRELGIIHTDLKPENILLVS 179
CK +L + YLH E GIIH DLKPEN+LL S
Sbjct: 253 ATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 288
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVILR---AGY 290
KPE L D K+ DFG++ K E R Y APEV++ AGY
Sbjct: 280 KPENVLLSSQEEDCLIKITDFGHS----KILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 335
Query: 291 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEV 326
+ +VD WS F +G F+ Q +D++
Sbjct: 336 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 371
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 32/155 (20%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY +KLG G + V L D T + A+KI K ++ V + G +
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSS-----------VTTTSNSGALLD 53
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLEL-------NKVRE-- 147
E V++ +DH PN + + EF D + Y+G EL K E
Sbjct: 54 EVAVLKQLDH-----PN---IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD 105
Query: 148 ---ICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
I K +L+G YLH+ I+H DLKPEN+LL S
Sbjct: 106 AAVIMKQVLSGTTYLHKH-NIVHRDLKPENLLLES 139
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DFG + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 88/233 (37%), Gaps = 44/233 (18%)
Query: 34 NGGRYIA-QRKLGWGQFSIVWLAYDTRTSSYVA---LKIQKSAAQFAQAALHEIEVLSAV 89
N GR++ ++G G F V+ DT T+ VA L+ +K Q E E L +
Sbjct: 23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGL 82
Query: 90 ADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREIC 149
+ ++R D ++ + + +V E L+ R+K ++ +R C
Sbjct: 83 QHPN------IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTY-LKRFKVXKIKVLRSWC 135
Query: 150 KYILTGLDYLH-RELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGST 208
+ IL GL +LH R IIH DLK +NI + P GS+ G
Sbjct: 136 RQILKGLQFLHTRTPPIIHRDLKCDNIFITG-------------------PTGSVKIGDL 176
Query: 209 STMTIVEXXXXXXXXXXXXNISIRRASMGGIELPKPERCLDGIDMRCKVVDFG 261
T+ S +A +G E PE + D V FG
Sbjct: 177 GLATL-------------KRASFAKAVIGTPEFXAPEXYEEKYDESVDVYAFG 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADG 92
RY QR LG G F V L D T A+K+ Q ++ L E+++L +
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 89
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLE-FLGDSLLRLIKYSRYKGLELNKVREICKY 151
D N +++L + F+ G + +V E + G L I SR + E++ R I +
Sbjct: 90 DHPN---IMKLYEFFEDKG----YFYLVGEVYTGGELFDEI-ISRKRFSEVDAAR-IIRQ 140
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186
+L+G+ Y+H+ I+H DLKPEN+LL S SKD
Sbjct: 141 VLSGITYMHKN-KIVHRDLKPENLLLES---KSKD 171
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 17/141 (12%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQK--SAAQFAQAALHEIEVLSAVADGDPSNEKCV 100
KLG G ++ V+ + T YVALK K S A+ EI ++ + + +
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK------HENI 65
Query: 101 IRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKY----SRYKGLELNKVREICKYILTGL 156
+RL D L +V EF+ + L + + + +GLELN V+ +L GL
Sbjct: 66 VRLYDVIH----TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 157 DYLHRELGIIHTDLKPENILL 177
+ H E I+H DLKP+N+L+
Sbjct: 122 AFCH-ENKILHRDLKPQNLLI 141
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 297
KP+ L + K+ DFG A RA F+ E+ T YRAP+V++ + YS S+D+W
Sbjct: 135 KPQNLLINKRGQLKLGDFGLA-RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIW 193
Query: 298 SFACTAFELATGDMLF 313
S C E+ TG LF
Sbjct: 194 SCGCILAEMITGKPLF 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 28/158 (17%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--------------QKSAAQFAQAAL 80
G Y RKLG G + V L + S A+K+ K+ +F +
Sbjct: 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94
Query: 81 HEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKG 139
+EI +L ++ D N +I+L D F + ++ +V EF G L I +R+K
Sbjct: 95 NEISLLKSL---DHPN---IIKLFDVF----EDKKYFYLVTEFYEGGELFEQI-INRHKF 143
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E + I K IL+G+ YLH+ I+H D+KPENILL
Sbjct: 144 DECDAAN-IMKQILSGICYLHKH-NIVHRDIKPENILL 179
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 66 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKPEN+L+
Sbjct: 122 HSH-RVLHRDLKPENLLI 138
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KPE L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 132 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 191 SLGCIFAEMVTRRALF 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVL 86
G L + + K+G G + +V+ A + T VALK + A+ EI +L
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVR 146
+ N +++L+D L +V EFL L + + S G+ L ++
Sbjct: 61 KEL------NHPNIVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK 110
Query: 147 EICKYILTGLDYLHRELGIIHTDLKPENILL 177
+L GL + H ++H DLKP+N+L+
Sbjct: 111 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLI 140
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 134 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 193 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 32/155 (20%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY +KLG G + V L D T + A+KI K ++ V + G +
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSS-----------VTTTSNSGALLD 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLEL-------NKVRE-- 147
E V++ +DH PN + + EF D + Y+G EL K E
Sbjct: 71 EVAVLKQLDH-----PN---IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD 122
Query: 148 ---ICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
I K +L+G YLH+ I+H DLKPEN+LL S
Sbjct: 123 AAVIMKQVLSGTTYLHKH-NIVHRDLKPENLLLES 156
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 64
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKPEN+L+
Sbjct: 121 HSH-RVLHRDLKPENLLI 137
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KPE L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 131 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 190 SLGCIFAEMVTRRALF 205
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH-EIEVLSAVADGD 93
G RY RK+G G F ++L D VA+K++ + Q + +I + G
Sbjct: 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGI 67
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
P+ C G G + MV+E LG SL L + K L V + ++
Sbjct: 68 PTIRWC-----------GAEGDYNVMVMELLGPSLEDLFNFCSRK-FSLKTVLLLADQMI 115
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ ++Y+H + IH D+KP+N L+
Sbjct: 116 SRIEYIHSK-NFIHRDVKPDNFLM 138
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH-EIEVLSAVADGD 93
G RY RK+G G F ++L D VA+K++ + Q + +I + G
Sbjct: 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGI 65
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
P+ C G G + MV+E LG SL L + K L V + ++
Sbjct: 66 PTIRWC-----------GAEGDYNVMVMELLGPSLEDLFNFCSRK-FSLKTVLLLADQMI 113
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ ++Y+H + IH D+KP+N L+
Sbjct: 114 SRIEYIHSK-NFIHRDVKPDNFLM 136
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKPEN+L+
Sbjct: 123 HSH-RVLHRDLKPENLLI 139
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KPE L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 133 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 192 SLGCIFAEMVTRRALF 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 64
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKPEN+L+
Sbjct: 121 HSH-RVLHRDLKPENLLI 137
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KPE L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 131 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHE--IEVLSAVADGDPSNEKC 99
+K+G G F + L + T+ YVA+K++ ++ Q L + L + +G P
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQ---- 61
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+ +F GP G++ MVLE LG SL L + L V I +L+ ++Y+
Sbjct: 62 ----VYYF---GPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYV 113
Query: 160 HRELGIIHTDLKPENILL 177
H + +I+ D+KPEN L+
Sbjct: 114 HSK-NLIYRDVKPENFLI 130
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF---AQAALHEIEVLSAVADGD 93
+Y +KLG G + IVW + D RT VA+K A Q AQ EI +L+ +
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL---- 65
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
S + ++ L++ + N + + +V +++ L +I R LE + + ++
Sbjct: 66 -SGHENIVNLLNVLR--ADNDRDVYLVFDYMETDLHAVI---RANILEPVHKQYVVYQLI 119
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ YLH G++H D+KP NILL
Sbjct: 120 KVIKYLHSG-GLLHRDMKPSNILL 142
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 270 FAEEIQTRQYRAPEVIL-RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVG 327
+ + TR YRAPE++L Y+ +DMWS C E+ G +F S E +G
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++ FG A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++D G A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++DF A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 66 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 122 HSH-RVLHRDLKPQNLLI 138
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 132 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 191 SLGCIFAEMVTRRALF 206
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 70
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 71 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 127 HSH-RVLHRDLKPQNLLI 143
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 137 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 195
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 196 SLGCIFAEMVTRRALF 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 192 SLGCIFAEMVTRRALF 207
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 67
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 68 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 124 HSH-RVLHRDLKPQNLLI 140
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 134 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 193 SLGCIFAEMVTRRALF 208
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADG 92
RY QR LG G F V L D T A+K+ Q ++ L E+++L +
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 83
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLE-FLGDSLLRLIKYSRYKGLELNKVREICKY 151
D N + +L + F+ G + +V E + G L I SR + E++ R I +
Sbjct: 84 DHPN---IXKLYEFFEDKG----YFYLVGEVYTGGELFDEI-ISRKRFSEVDAAR-IIRQ 134
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
+L+G+ Y H+ I+H DLKPEN+LL S
Sbjct: 135 VLSGITYXHKN-KIVHRDLKPENLLLES 161
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 70
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 71 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 127 HSH-RVLHRDLKPQNLLI 143
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L YS +VD+W
Sbjct: 137 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 195
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 196 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA---LKIQKSAAQFAQAALHEIEVLSAV 89
FN + ++LG G+F++V T A LK ++ LHEI VL +
Sbjct: 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLE-L 84
Query: 90 ADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREI 148
A P VI L + ++ N + ++LE+ G + L + + N V +
Sbjct: 85 AKSCPR----VINLHEVYE----NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRL 136
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186
K IL G+ YLH+ I+H DLKP+NILL S+I P D
Sbjct: 137 IKQILEGVYYLHQN-NIVHLDLKPQNILL-SSIYPLGD 172
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 256 KVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+VDFG + + + E + T +Y APE++ + + DMW+ A+ L T F
Sbjct: 174 KIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
Query: 314 APKSGQ 319
+ Q
Sbjct: 234 VGEDNQ 239
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 66 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 122 HSH-RVLHRDLKPQNLLI 138
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 132 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLS 87
RVG+ F GR K+G G F ++L + +T+ VA+K++ + Q L+E ++
Sbjct: 4 RVGNKFRLGR-----KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKIYR 57
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVRE 147
+ G I + + G G + +V++ LG SL L + K L L V
Sbjct: 58 ILQGGTG---------IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK-LSLKTVLM 107
Query: 148 ICKYILTGLDYLHRELGIIHTDLKPENILL 177
+ ++ ++++H + +H D+KP+N L+
Sbjct: 108 LADQMINRVEFVHSK-SFLHRDIKPDNFLM 136
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 64
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 121 HSH-RVLHRDLKPQNLLI 137
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 131 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 190 SLGCIFAEMVTRRALF 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 64
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 121 HSH-RVLHRDLKPQNLLI 137
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 131 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 62
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 64
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 121 HSH-RVLHRDLKPQNLLI 137
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 131 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 190 SLGCIFAEMVTRRALF 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 62
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 62
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++D G A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 62
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L YS +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 189 SLGCIFAEMVTRRALF 204
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHE--IEVLSAVADG 92
G + +K+G G F + L + T+ YVA+K++ ++ Q L + LSA +G
Sbjct: 3 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSA-TEG 61
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
P + +F GP G++ MVLE LG SL L + L V I +
Sbjct: 62 VPQ--------VYYF---GPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQL 109
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
+T ++Y+H + +I+ D+KPEN L+
Sbjct: 110 ITRMEYVHTK-SLIYRDVKPENFLV 133
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 301
KP D K++D G A + + + TR YRAPE++L Y+ +VD+WS C
Sbjct: 152 KPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 302 TAFELATGDMLF 313
EL TG LF
Sbjct: 212 IMAELLTGRTLF 223
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
RY +G G + V A+DT+T VA+K Q A+ E+ +L +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 78
Query: 94 PSNEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI L+D F A + +V +G L ++K + L + V+ +
Sbjct: 79 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQ 133
Query: 152 ILTGLDYLHRELGIIHTDLKPENI 175
IL GL Y+H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 243 KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 299
KPE L + K+ DFG A K+ T +Y APEV+ R G+S S D WS+
Sbjct: 157 KPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSY 216
Query: 300 ACTAFELATGDMLFAPK 316
FE+ TG + F K
Sbjct: 217 GVLMFEMLTGSLPFQGK 233
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 44 LGWGQFSIVWLAYD-TRTSS--YVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCV 100
LG G F V+L TR S A+K+ K A + + +AD N V
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILAD---VNHPFV 92
Query: 101 IRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILT---- 154
++L F+ G L ++L+FL GD RL K E+ E K+ L
Sbjct: 93 VKLHYAFQTEGK----LYLILDFLRGGDLFTRLSK-------EVMFTEEDVKFYLAELAL 141
Query: 155 GLDYLHRELGIIHTDLKPENILL 177
GLD+LH LGII+ DLKPENILL
Sbjct: 142 GLDHLH-SLGIIYRDLKPENILL 163
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKPEN+L+
Sbjct: 120 HSH-RVLHRDLKPENLLI 136
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KPE L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 297
KP+ L D K+ DFG A RA + + E+ T YRAP+V++ YS SVD+W
Sbjct: 146 KPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 298 SFACTAFELATGDMLF 313
S C E+ TG LF
Sbjct: 205 SIGCIFAEMITGKPLF 220
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
+Y K+G G + +V+ A D++ VALK + A+ A+ EI +L +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL---- 76
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
+ ++ LID + + L +V EF+ L +++ ++ GL+ ++++ +L
Sbjct: 77 --HHPNIVSLIDVIH----SERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLL 129
Query: 154 TGLDYLHRELGIIHTDLKPENILLVS 179
G+ + H+ I+H DLKP+N+L+ S
Sbjct: 130 RGVAHCHQH-RILHRDLKPQNLLINS 154
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 297
KP+ L D K+ DFG A RA + + E+ T YRAP+V++ YS SVD+W
Sbjct: 146 KPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 298 SFACTAFELATGDMLF 313
S C E+ TG LF
Sbjct: 205 SIGCIFAEMITGKPLF 220
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGD 93
+Y K+G G + +V+ A D++ VALK + A+ A+ EI +L +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL---- 76
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
+ ++ LID + + L +V EF+ L +++ ++ GL+ ++++ +L
Sbjct: 77 --HHPNIVSLIDVIH----SERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLL 129
Query: 154 TGLDYLHRELGIIHTDLKPENILLVS 179
G+ + H+ I+H DLKP+N+L+ S
Sbjct: 130 RGVAHCHQH-RILHRDLKPQNLLINS 154
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 42/243 (17%)
Query: 41 QRKLGWGQFSIVWLA-YDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
++KLG GQF VW+A Y+ T VA+K K + +A L E V+ +
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL------QHDK 244
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
+++L HA + + ++ EF+ SLL +K L K+ + I G+ +
Sbjct: 245 LVKL-----HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 159 LHRELGIIHTDLKPENIL-------------LVSTIDPSKDPIRSGLT-PILERPEGSIN 204
+ + IH DL+ NIL L I+ ++ R G PI +IN
Sbjct: 300 IEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 358
Query: 205 GGSTSTMTIVEXXXXXXXXXXX---------XNISIRRASMGGIELPKPERC---LDGID 252
GS + + V N + RA G +P+PE C L I
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIM 418
Query: 253 MRC 255
MRC
Sbjct: 419 MRC 421
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 255 CKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 323 CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 42/243 (17%)
Query: 41 QRKLGWGQFSIVWLA-YDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
++KLG GQF VW+A Y+ T VA+K K + +A L E V+ +
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTLQHDK------ 71
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
+++L HA + + ++ EF+ SLL +K L K+ + I G+ +
Sbjct: 72 LVKL-----HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 126
Query: 159 LHRELGIIHTDLKPENIL-------------LVSTIDPSKDPIRSGLT-PILERPEGSIN 204
+ + IH DL+ NIL L I+ ++ R G PI +IN
Sbjct: 127 IEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 205 GGSTSTMTIVEXXXXXXXXXXX---------XNISIRRASMGGIELPKPERC---LDGID 252
GS + + V N + RA G +P+PE C L I
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIM 245
Query: 253 MRC 255
MRC
Sbjct: 246 MRC 248
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 255 CKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 150 CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAAL-HEIEVLSAVADGDPSN 96
+I LG G FS V+L T ALK K + F ++L +EI VL + +
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
+ + H+ +L M L G+ R+++ Y + + V + +L+ +
Sbjct: 71 LEDIYESTTHY--------YLVMQLVSGGELFDRILERGVYTEKDASLV---IQQVLSAV 119
Query: 157 DYLHRELGIIHTDLKPENILLVSTIDPSK 185
YLH E GI+H DLKPEN+L ++ + SK
Sbjct: 120 KYLH-ENGIVHRDLKPENLLYLTPEENSK 147
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 243 KPERCL---DGIDMRCKVVDFG-NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
KPE L + + + DFG + N + T Y APEV+ + YS +VD WS
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWS 192
Query: 299 FACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICFFVDPLQHDIRDVI 348
+ L G F ++ E + F F D + +D I
Sbjct: 193 IGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFI 242
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + S G+ L ++ +L GL +
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 192 SLGCIFAEMVTRRALF 207
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 23 GYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFA-----Q 77
G V V D YI + +G G + V+LAYD T VA+K K F +
Sbjct: 18 GIKNVHVPD-----NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK--KVNRMFEDLIDCK 70
Query: 78 AALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG----QHLCMVLEFLGDSLLRLIK 133
L EI +L+ + +IRL D P+ L +VLE L +L K
Sbjct: 71 RILREITILNRLKSD------YIIRLYDLI---IPDDLLKFDELYIVLEIADSDLKKLFK 121
Query: 134 YSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+ L ++ I +L G +++H E GIIH DLKP N LL
Sbjct: 122 TPIF--LTEEHIKTILYNLLLGENFIH-ESGIIHRDLKPANCLL 162
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 49/126 (38%), Gaps = 37/126 (29%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRAN-------------------------KQFAEEIQTR 277
KP CL D KV DFG A N KQ + TR
Sbjct: 156 KPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR 215
Query: 278 QYRAPEVI-LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIF---I 333
YRAPE+I L+ Y+ S+D+WS C EL +ML Q D F +F
Sbjct: 216 WYRAPELILLQENYTKSIDIWSTGCIFAELL--NML------QSHINDPTNRFPLFPGSS 267
Query: 334 CFFVDP 339
CF + P
Sbjct: 268 CFPLSP 273
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVAL---KIQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VAL ++ A+ EI +L + N
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL------NHPN 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVAL---KIQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VAL ++ A+ EI +L + N
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL------NHPN 62
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + + S G+ L ++ +L GL +
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
+G G + V+ +T A+K+ + EI +L S+ + +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKY-----SHHRNIATY 86
Query: 104 IDHFKHAGPNG--QHLCMVLEFLG-DSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
F P G L +V+EF G S+ LIK ++ L+ + IC+ IL GL +LH
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 161 RELGIIHTDLKPENILLVSTID 182
+ +IH D+K +N+LL +
Sbjct: 147 QH-KVIHRDIKGQNVLLTENAE 167
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACTA 303
+ K+VDFG + + ++ I T + APEVI A Y F D+WS TA
Sbjct: 165 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA 224
Query: 304 FELATG 309
E+A G
Sbjct: 225 IEMAEG 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 296 MWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICFFVDPLQHDIRDVIN 349
+WS C E+ + +F G+ + + + P Q D+ +IN
Sbjct: 211 IWSVGCILAEMLSNRPIFP---GKHYLDQ----LNHILGILGSPSQEDLNXIIN 257
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 123
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 124 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 162
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
++G G F V+ D RT VA+KI + A + EI VLS +C
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS----------QC 78
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
+ + + G L +++E+L G S L L++ + + + + K IL GLDY
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ---IATMLKEILKGLDY 135
Query: 159 LHRELGIIHTDLKPENILL 177
LH E IH D+K N+LL
Sbjct: 136 LHSEKK-IHRDIKAANVLL 153
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 255 CKVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 310
K+ DFG A + + Q + T + APEVI ++ Y D+WS TA ELA G+
Sbjct: 159 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDP 94
G +Y RK+G G F ++L + + VA+K++ + Q LH + G
Sbjct: 8 GNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQ--LHIESKFYKMMQGGV 65
Query: 95 SNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT 154
I K G G + MV+E LG SL L + K L V + +++
Sbjct: 66 G--------IPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK-FSLKTVLLLADQMIS 116
Query: 155 GLDYLHRELGIIHTDLKPENILL 177
++Y+H + IH D+KP+N L+
Sbjct: 117 RIEYIHSK-NFIHRDVKPDNFLM 138
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 33/154 (21%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y +KLG G + V L D T A+KI + + +S ++ E
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS------------VSTSSNSKLLEE 86
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLEL----------NKVRE 147
V++L+DH PN + + +F D + YKG EL N+V
Sbjct: 87 VAVLKLLDH-----PN---IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 148 --ICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
I K +L+G+ YLH+ I+H DLKPEN+LL S
Sbjct: 139 AVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLES 171
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 243 KPERCL---DGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
KPE L D K+VDFG + K+ E + T Y APEV LR Y D+W
Sbjct: 163 KPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVW 221
Query: 298 SFACTAFELATGDMLFAPKSGQ 319
S F L G + P GQ
Sbjct: 222 SIGVILFILLAG---YPPFGGQ 240
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ + E + TR YRAPE++L + GY+ S+D
Sbjct: 171 KPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSID 230
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 231 IWSVGCILAEMLSNRPIFPGK 251
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVLSAVADG 92
G RY + +G G + +V AYD + VA+K I Q + Q L EI++L
Sbjct: 42 GPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRF--- 98
Query: 93 DPSNEKCVIRLIDHFKHAGPNG-QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+ VI + D + + + + +V + + L +L+K + IC +
Sbjct: 99 ---RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN------DHICYF 149
Query: 152 ---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IL GL Y+H ++H DLKP N+L+ +T D
Sbjct: 150 LYQILRGLKYIH-SANVLHRDLKPSNLLINTTCD 182
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + S G+ L ++ +L GL +
Sbjct: 66 IVKLLDVIH----TENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 122 HSH-RVLHRDLKPQNLLI 138
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 132 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V EFL L + S G+ L ++ +L GL +
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 171 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 231 IWSVGCILAEMLSNRPIFPGK 251
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V +G L +L+K
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKD-------VYLVTHLMGADLYKLLKTQHLSN----- 143
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 144 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 182
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 296 MWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICFFVDPLQHDIRDVIN 349
+WS C E+ + +F G+ + + + P Q D+ +IN
Sbjct: 211 IWSVGCILAEMLSNRPIFP---GKHYLDQ----LNHILGILGSPSQEDLNXIIN 257
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 123
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 124 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 162
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 297
KP+ L K+ DFG A RA K + E+ T YR P+++L YS +DMW
Sbjct: 127 KPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
Query: 298 SFACTAFELATGDMLF 313
C +E+ATG LF
Sbjct: 186 GVGCIFYEMATGRPLF 201
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 26/148 (17%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
YI KLG G ++ V+ T + VALK E+ +G P
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALK----------------EIRLEHEEGAPCTA 47
Query: 98 KCVIRLIDHFKHAGPNGQH--------LCMVLEFLGDSLLRLIKYSRYKGLELNKVREIC 149
+ L+ KHA H L +V E+L L + + + ++ V+
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFL 106
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILL 177
+L GL Y HR+ ++H DLKP+N+L+
Sbjct: 107 FQLLRGLAYCHRQ-KVLHRDLKPQNLLI 133
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ +G G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 215 IWSVGCILAEMLSNRPIFPGK 235
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 127
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 128 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 166
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ +G G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ GD L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ +G G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ GD L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
R LG G F V L T ++ A+KI ++ + Q L+E + AV N
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MVLE+ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVLEYAPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLI 175
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 211 IWSVGCILAEMLSNRPIFPGK 231
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 123
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 124 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 162
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
G YI + LG G F V LA +T VALK + Q + + + V ++
Sbjct: 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKF--ISRQLLKKSDMHMRVEREISYLKLL 66
Query: 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+I+L D + MV+E+ G L I K + ++ R + I+
Sbjct: 67 RHPHIIKLYDVIT----TPTDIVMVIEYAGGELFDYI--VEKKRMTEDEGRRFFQQIICA 120
Query: 156 LDYLHRELGIIHTDLKPENILL 177
++Y HR I+H DLKPEN+LL
Sbjct: 121 IEYCHRH-KIVHRDLKPENLLL 141
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMWSF 299
KPE L ++ K+ DFG N + Y APEVI Y+ VD+WS
Sbjct: 135 KPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSC 194
Query: 300 ACTAFELATGDMLF 313
+ + G + F
Sbjct: 195 GIVLYVMLVGRLPF 208
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 215 IWSVGCILAEMLSNRPIFPGK 235
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 127
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 128 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 166
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K++DFG+A A + I +R YRAPE+I A Y+ ++D+WS
Sbjct: 168 KPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWS 227
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G LF +SG
Sbjct: 228 TGCVMAELMQGQPLFPGESG 247
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A S VA+K +F E++++ V +
Sbjct: 42 YTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRFKN---RELQIMRIVKHPN---- 93
Query: 98 KCVIRLIDHFKHAGPNGQH--LCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYIL 153
V+ L F G L +VLE++ +++ R + Y++ K + + ++ +L
Sbjct: 94 --VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
L Y+H +GI H D+KP+N+LL
Sbjct: 152 RSLAYIH-SIGICHRDIKPQNLLL 174
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 153 KPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 213 IWSVGCILAEMLSNRPIFPGK 233
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
A + +IR I+ K + +V + + L +L+K
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 125
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 126 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTSD 164
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 243 KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 299
KPE L + K+ DFG + K+ T +Y APEV+ R G++ S D WSF
Sbjct: 153 KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 300 ACTAFELATGDMLFAPK 316
FE+ TG + F K
Sbjct: 213 GVLMFEMLTGTLPFQGK 229
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 44 LGWGQFSIVWLAYDTRTS---SYVALKIQKSAAQFAQAALH---EIEVLSAVADGDPSNE 97
LG G F V+L S A+K+ K A + + E ++L V N
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------NH 85
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILT- 154
+++L F+ G L ++L+FL GD RL K E+ E K+ L
Sbjct: 86 PFIVKLHYAFQTEGK----LYLILDFLRGGDLFTRLSK-------EVMFTEEDVKFYLAE 134
Query: 155 ---GLDYLHRELGIIHTDLKPENILL 177
LD+LH LGII+ DLKPENILL
Sbjct: 135 LALALDHLH-SLGIIYRDLKPENILL 159
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 243 KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 299
KPE L + K+ DFG + K+ T +Y APEV+ R G++ S D WSF
Sbjct: 154 KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 213
Query: 300 ACTAFELATGDMLFAPK 316
FE+ TG + F K
Sbjct: 214 GVLMFEMLTGTLPFQGK 230
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 44 LGWGQFSIVWLAYDTRTS---SYVALKIQKSAAQFAQAALH---EIEVLSAVADGDPSNE 97
LG G F V+L S A+K+ K A + + E ++L V N
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------NH 86
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILT- 154
+++L F+ G L ++L+FL GD RL K E+ E K+ L
Sbjct: 87 PFIVKLHYAFQTEGK----LYLILDFLRGGDLFTRLSK-------EVMFTEEDVKFYLAE 135
Query: 155 ---GLDYLHRELGIIHTDLKPENILL 177
LD+LH LGII+ DLKPENILL
Sbjct: 136 LALALDHLH-SLGIIYRDLKPENILL 160
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 21 KGGYHAV-RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAA 79
+G Y V + DL NGGR++A +++ ++Q +
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV----------------------RVQTGEEGMPLST 58
Query: 80 LHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ-HLCMVLEFLGDSLLRLIKYSRYK 138
+ E+ VL + + N V+RL D + + + L +V E + L +
Sbjct: 59 IREVAVLRHLETFEHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP 115
Query: 139 GLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVST 180
G+ ++++ +L GLD+LH ++H DLKP+NIL+ S+
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSS 156
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP+ L + K+ DFG A + Q A + T YRAPEV+L++ Y+ VD+WS
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 301 CTAFELATGDMLF 313
C E+ LF
Sbjct: 207 CIFAEMFRRKPLF 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 21 KGGYHAV-RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAA 79
+G Y V + DL NGGR++A +++ ++Q +
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV----------------------RVQTGEEGMPLST 58
Query: 80 LHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ-HLCMVLEFLGDSLLRLIKYSRYK 138
+ E+ VL + + N V+RL D + + + L +V E + L +
Sbjct: 59 IREVAVLRHLETFEHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP 115
Query: 139 GLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVST 180
G+ ++++ +L GLD+LH ++H DLKP+NIL+ S+
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSS 156
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP+ L + K+ DFG A + Q A + T YRAPEV+L++ Y+ VD+WS
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 301 CTAFELATGDMLF 313
C E+ LF
Sbjct: 207 CIFAEMFRRKPLF 219
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 214
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 215 IWSVGCILAEMLSNRPIFPGK 235
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 127
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 128 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 166
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 156 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 215
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 216 IWSVGCILAEMLSNRPIFPGK 236
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 128
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 129 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 167
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 171 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 231 IWSVGCILAEMLSNRPIFPGK 251
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 143
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 144 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 182
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 153 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 213 IWSVGCILAEMLSNRPIFPGK 233
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
A + +IR I+ K + +V + + L +L+K
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 125
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 126 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 164
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+ +L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 102 PFLTKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 155 FEYLH-SLDLIYRDLKPENLMI 175
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+ +L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 102 PFLTKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 155 FEYLH-SLDLIYRDLKPENLMI 175
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 154 FEYLH-SLDLIYRDLKPENLMI 174
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 215 IWSVGCILAEMLSNRPIFPGK 235
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVAL-KIQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+ KI Q + Q L EI++L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 127
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 128 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 166
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+ +L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 102 PFLTKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 155 FEYLH-SLDLIYRDLKPENLMI 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 156 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 215
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 216 IWSVGCILAEMLSNRPIFPGK 236
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 128
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 129 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 167
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 155 FEYLH-SLDLIYRDLKPENLMI 175
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 157 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 216
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 217 IWSVGCILAEMLSNRPIFPGK 237
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 22 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 129
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 130 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 168
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 148 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 207
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 208 IWSVGCILAEMLSNRPIFPGK 228
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 13 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 120
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 121 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 159
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 215 IWSVGCILAEMLSNRPIFPGK 235
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 127
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 128 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 166
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 159 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 218
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 219 IWSVGCILAEMLSNRPIFPGK 239
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 24 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 131
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 132 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 170
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 211 IWSVGCILAEMLSNRPIFPGK 231
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 123
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 124 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 162
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 154 FEYLH-SLDLIYRDLKPENLMI 174
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 149 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 208
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 209 IWSVGCILAEMLSNRPIFPGK 229
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 121
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 122 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 160
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 149 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 208
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 209 IWSVGCILAEMLSNRPIFPGK 229
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 121
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 122 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 160
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 21 KGGYHAV-RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAA 79
+G Y V + DL NGGR++A +++ ++Q +
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV----------------------RVQTGEEGMPLST 58
Query: 80 LHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ-HLCMVLEFLGDSLLRLIKYSRYK 138
+ E+ VL + + N V+RL D + + + L +V E + L +
Sbjct: 59 IREVAVLRHLETFEHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP 115
Query: 139 GLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVST 180
G+ ++++ +L GLD+LH ++H DLKP+NIL+ S+
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSS 156
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KP+ L + K+ DFG A + Q A + T YRAPEV+L++ Y+ VD+WS
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 301 CTAFELATGDMLF 313
C E+ LF
Sbjct: 207 CIFAEMFRRKPLF 219
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 211 IWSVGCILAEMLSNRPIFPGK 231
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 123
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 124 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 162
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 153 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 213 IWSVGCILAEMLSNRPIFPGK 233
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKTQHLSN----- 125
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 126 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 164
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 295
KP L K+ DFG A A+ E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 296 MWSFACTAFELATGDMLFAPK 316
+WS C E+ + +F K
Sbjct: 215 IWSVGCILAEMLSNRPIFPGK 235
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 30 GDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQ-FAQAALHEIEVL 86
G +F+ G RY +G G + +V AYD VA+K I Q + Q L EI++L
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 87 SAVADGDPSNEKCVIR--LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+ +IR I+ K + +V + + L +L+K
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKD-------VYIVQDLMETDLYKLLKCQHLSN----- 127
Query: 145 VREICKY---ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
IC + IL GL Y+H ++H DLKP N+LL +T D
Sbjct: 128 -DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 166
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + KV DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAA-QFAQAALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI QK + + L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 154 FEYLH-SLDLIYRDLKPENLMI 174
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
+KLG GQF VW+ Y S+ VA+K K QA L E ++ + ++
Sbjct: 18 KKLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL------QHDKLV 70
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
RL P + ++ EF+ SLL +K + L K+ + I G+ Y+
Sbjct: 71 RLYAVVTKEEP----IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 161 RELGIIHTDLKPENILLVSTI 181
R+ IH DL+ N+L+ ++
Sbjct: 127 RK-NYIHRDLRAANVLVSESL 146
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ ++WSF +E+ T
Sbjct: 146 LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 243 KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 299
KPE L + K+ DFG + K+ T +Y APEV+ R G++ S D WSF
Sbjct: 153 KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 300 ACTAFELATGDMLFAPK 316
FE+ TG + F K
Sbjct: 213 GVLMFEMLTGTLPFQGK 229
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 44 LGWGQFSIVWLAYDTRTS---SYVALKIQKSAAQFAQAALH---EIEVLSAVADGDPSNE 97
LG G F V+L S A+K+ K A + + E ++L V N
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------NH 85
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILT- 154
+++L F+ G L ++L+FL GD RL K E+ E K+ L
Sbjct: 86 PFIVKLHYAFQTEG----KLYLILDFLRGGDLFTRLSK-------EVMFTEEDVKFYLAE 134
Query: 155 ---GLDYLHRELGIIHTDLKPENILL 177
LD+LH LGII+ DLKPENILL
Sbjct: 135 LALALDHLH-SLGIIYRDLKPENILL 159
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 297
KP+ L + K+ DFG A RA +++ EI T YRAP+V++ YS ++D+W
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 298 SFACTAFELATGDMLF 313
S C E+ G LF
Sbjct: 186 SVGCIFAEMVNGTPLF 201
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDP 94
+Y K+G G + +V+ A + ++ KI +K + EI +L + +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN- 61
Query: 95 SNEKCVIRLID--HFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+++L D H K + L +V E L L +L+ GLE + +
Sbjct: 62 -----IVKLYDVIHTK------KRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQL 109
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L G+ Y H + ++H DLKP+N+L+
Sbjct: 110 LNGIAYCH-DRRVLHRDLKPQNLLI 133
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 303 AFELATG 309
+E+A G
Sbjct: 249 IYEMAAG 255
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 121
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 122 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 174
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 175 FEYLH-SLDLIYRDLKPENLLI 195
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 303 AFELATG 309
+E+A G
Sbjct: 249 IYEMAAG 255
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 121
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 122 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 174
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 175 FEYLH-SLDLIYRDLKPENLLI 195
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 303 AFELATG 309
+E+A G
Sbjct: 221 IYEMAAG 227
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 93
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 94 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 146
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 147 FEYLH-SLDLIYRDLKPENLLI 167
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 303 AFELATG 309
+E+A G
Sbjct: 221 IYEMAAG 227
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 93
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 94 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 146
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 147 FEYLH-SLDLIYRDLKPENLLI 167
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 154 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVL 213
Query: 303 AFELATG 309
+E+A G
Sbjct: 214 IYEMAAG 220
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 86
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 87 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSE---PHARFYAAQIVLT 139
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 140 FEYLH-SLDLIYRDLKPENLLI 160
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLI 175
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLI 175
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEYSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLI 175
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 163 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 222
Query: 303 AFELATG 309
+E+A G
Sbjct: 223 IYEMAAG 229
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 95
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 96 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 148
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 149 FEYLH-SLDLIYRDLKPENLLI 169
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLI 175
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLI 175
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
+LG G F V+ A + TS A K I + + + + EI++L++ + ++
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC------DHPNIV 97
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
+L+D F + +L +++EF + + + L ++++ +CK L L+YLH
Sbjct: 98 KLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 162 ELGIIHTDLKPENILLV 178
IIH DLK NIL
Sbjct: 154 N-KIIHRDLKAGNILFT 169
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 251 IDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACT 302
+D K+ DFG + + + I T + APEV++ Y + D+WS T
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 303 AFELA 307
E+A
Sbjct: 230 LIEMA 234
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
+LG G F V+ A + TS A K I + + + + EI++L++ + ++
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC------DHPNIV 97
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
+L+D F + +L +++EF + + + L ++++ +CK L L+YLH
Sbjct: 98 KLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 162 ELGIIHTDLKPENILLV 178
IIH DLK NIL
Sbjct: 154 N-KIIHRDLKAGNILFT 169
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 251 IDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACT 302
+D K+ DFG + + + I T + APEV++ Y + D+WS T
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 303 AFELA 307
E+A
Sbjct: 230 LIEMA 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLI 175
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEYSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 303 AFELATG 309
+E+A G
Sbjct: 229 IYEMAAG 235
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 101
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 102 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 154
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLI 175
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEYSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 155 KPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 214
Query: 303 AFELATG 309
+E+A G
Sbjct: 215 IYEMAAG 221
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 87
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 88 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 140
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 141 FEYLH-SLDLIYRDLKPENLLI 161
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
+LG G F V+ A + TS A K I + + + + EI++L++ + ++
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC------DHPNIV 97
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
+L+D F + +L +++EF + + + L ++++ +CK L L+YLH
Sbjct: 98 KLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 162 ELGIIHTDLKPENILLV 178
IIH DLK NIL
Sbjct: 154 N-KIIHRDLKAGNILFT 169
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 251 IDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACT 302
+D K+ DFG + + + I T + APEV++ Y + D+WS T
Sbjct: 170 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 303 AFELA 307
E+A
Sbjct: 230 LIEMA 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 93/233 (39%), Gaps = 32/233 (13%)
Query: 41 QRKLGWGQFSIVWLA-YDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
++KLG GQF VW+A Y+ T VA+K K + +A L E V+ +
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL------QHDK 238
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
+++L HA + + ++ EF+ SLL +K L K+ + I G+ +
Sbjct: 239 LVKL-----HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 293
Query: 159 LHRELGIIHTDLKPENIL----LVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIV 214
+ + IH DL+ NIL LV I PI +IN GS + + V
Sbjct: 294 IEQR-NYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 215 EXXXXXXXXXXX---------XNISIRRASMGGIELPKPERC---LDGIDMRC 255
N + RA G +P+PE C L I MRC
Sbjct: 353 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRC 405
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 255 CKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
CK+ DFG A R +F ++ APE I ++ D+WSF E+ T
Sbjct: 317 CKIADFGLA-RVGAKFP-----IKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 297
KP+ L + K+ DFG A RA +++ E+ T YRAP+V++ YS ++D+W
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 298 SFACTAFELATGDMLF 313
S C E+ G LF
Sbjct: 186 SVGCIFAEMVNGTPLF 201
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDP 94
+Y K+G G + +V+ A + ++ KI +K + EI +L + +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN- 61
Query: 95 SNEKCVIRLID--HFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+++L D H K + L +V E L L +L+ GLE + +
Sbjct: 62 -----IVKLYDVIHTK------KRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQL 109
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L G+ Y H + ++H DLKP+N+L+
Sbjct: 110 LNGIAYCH-DRRVLHRDLKPQNLLI 133
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIE 84
+A V + N Y RKLG G++S V+ A + + V +KI K + EI+
Sbjct: 26 YASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIK 83
Query: 85 VLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK 144
+L + G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 84 ILENLRGG-PN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDYD 132
Query: 145 VREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 133 IRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 243 KPERCL-DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L + D K+ DFG+A + ++ I +R YRAPE++L A Y+ S+D+WS
Sbjct: 168 KPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWS 227
Query: 299 FACTAFELATGDMLFA 314
C EL G LF+
Sbjct: 228 IGCVFGELILGKPLFS 243
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 46/179 (25%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
+Y + LG G F IV +D + ALK ++ L ++VL V
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVN------ 61
Query: 97 EKCVIRLIDHF----------------------KHAGPNGQH------------LCMVLE 122
+I+L+D+F K+ G N H L +++E
Sbjct: 62 ---IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 123 FLGDSLLRLIKYSRYKG--LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
++ D+L +++K G + +N + + + ++H LGI H D+KP+N+L+ S
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH-SLGICHRDIKPQNLLVNS 176
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY LG+G S V LA D R VA+K+ + A A+ + + N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALN 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
++ + D + P G +V+E++ LR I ++ + + E+ L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQAL 129
Query: 157 DYLHRELGIIHTDLKPENILLVST 180
++ H+ GIIH D+KP NIL+ +T
Sbjct: 130 NFSHQN-GIIHRDVKPANILISAT 152
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V E + L + + S G+ L ++ +L GL +
Sbjct: 67 IVKLLDVIH----TENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 298 SFACTAFELATGDMLF 313
S C E+ T LF
Sbjct: 192 SLGCIFAEMVTRRALF 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R T +Y APE+IL GY+ +VD W+
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 303 AFELATG 309
+E+A G
Sbjct: 249 IYEMAAG 255
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 121
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 122 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 174
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 175 FEYLH-SLDLIYRDLKPENLLI 195
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI K A+ + + V
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP------F 70
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K++ LC V+E+ L SR + ++ R I++ LDYLH E
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 164 GIIHTDLKPENILL 177
+++ DLK EN++L
Sbjct: 130 NVVYRDLKLENLML 143
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ + ++ T +Y APEV+ Y +VD W
Sbjct: 137 KLENLMLDKDGHIKITDFG-LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 196 LGVVMYEMMCGRLPFYNQDHEKLFE 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 297
KP+ L + K+ DFG A RA +++ E+ T YRAP+V++ YS ++D+W
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 298 SFACTAFELATGDMLF 313
S C E+ G LF
Sbjct: 186 SVGCIFAEMVNGAPLF 201
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDP 94
+Y K+G G + +V+ A + ++ KI +K + EI +L + +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN- 61
Query: 95 SNEKCVIRLID--HFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+++L D H K + L +V E L L +L+ GLE + +
Sbjct: 62 -----IVKLYDVIHTK------KRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQL 109
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L G+ Y H + ++H DLKP+N+L+
Sbjct: 110 LNGIAYCH-DRRVLHRDLKPQNLLI 133
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI K A+ + + V
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP------F 209
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K++ LC V+E+ L SR + ++ R I++ LDYLH E
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268
Query: 164 GIIHTDLKPENILL 177
+++ DLK EN++L
Sbjct: 269 NVVYRDLKLENLML 282
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ + ++T +Y APEV+ Y +VD W
Sbjct: 276 KLENLMLDKDGHIKITDFG-LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 334
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 335 LGVVMYEMMCGRLPFYNQDHEKLFE 359
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI K A+ + + V
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP------F 212
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K++ LC V+E+ L SR + ++ R I++ LDYLH E
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 164 GIIHTDLKPENILL 177
+++ DLK EN++L
Sbjct: 272 NVVYRDLKLENLML 285
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ + ++T +Y APEV+ Y +VD W
Sbjct: 279 KLENLMLDKDGHIKITDFG-LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 337
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 338 LGVVMYEMMCGRLPFYNQDHEKLFE 362
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI K A+ + + V
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP------F 71
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K++ LC V+E+ L SR + ++ R I++ LDYLH E
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 164 GIIHTDLKPENILL 177
+++ DLK EN++L
Sbjct: 131 NVVYRDLKLENLML 144
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ + ++ T +Y APEV+ Y +VD W
Sbjct: 138 KLENLMLDKDGHIKITDFG-LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 196
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 197 LGVVMYEMMCGRLPFYNQDHEKLFE 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI K A+ + + V
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP------F 69
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K++ LC V+E+ L SR + ++ R I++ LDYLH E
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 164 GIIHTDLKPENILL 177
+++ DLK EN++L
Sbjct: 129 NVVYRDLKLENLML 142
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ + ++ T +Y APEV+ Y +VD W
Sbjct: 136 KLENLMLDKDGHIKITDFG-LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 194
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 195 LGVVMYEMMCGRLPFYNQDHEKLFE 219
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
+LG G F V+ A + T + A K I+ + + + + EIE+L+ + ++
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT------CDHPYIV 71
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
+L+ + H G L +++EF + I +GL +++ +C+ +L L++LH
Sbjct: 72 KLLGAYYHDG----KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 162 ELGIIHTDLKPENILLV 178
+ IIH DLK N+L+
Sbjct: 128 K-RIIHRDLKAGNVLMT 143
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 256 KVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELA 307
++ DFG + + K + I T + APEV++ Y + D+WS T E+A
Sbjct: 149 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
+LG G F V+ A + T + A K I+ + + + + EIE+L+ + ++
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC------DHPYIV 79
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
+L+ + H G L +++EF + I +GL +++ +C+ +L L++LH
Sbjct: 80 KLLGAYYHDG----KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 162 ELGIIHTDLKPENILLV 178
+ IIH DLK N+L+
Sbjct: 136 K-RIIHRDLKAGNVLMT 151
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 256 KVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELA 307
++ DFG + + K + I T + APEV++ Y + D+WS T E+A
Sbjct: 157 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQ--AALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 154 FEYLH-SLDLIYRDLKPENLMI 174
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 297
KP+ L + K+ DFG A RA + + E+ T YRAPE++L Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 298 SFACTAFELATGDMLFAPKS--GQGF-------CEDEVGW 328
S C E+ T LF S Q F DEV W
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ A + T VALK + A+ EI +L + N
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPN 62
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+++L+D L +V E + L + S G+ L ++ +L GL +
Sbjct: 63 IVKLLDVIH----TENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 HRELGIIHTDLKPENILL 177
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAA-QFAQAALHEIEVLSAVADGDPSNE 97
+ LG G F V L T ++ A+KI QK + + L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E+ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 154 FEYLH-SLDLIYRDLKPENLMI 174
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY LG+G S V LA D R VA+K+ + A A+ + + N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALN 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
++ + D + P G +V+E++ LR I ++ + + E+ L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQAL 129
Query: 157 DYLHRELGIIHTDLKPENILLVST 180
++ H+ GIIH D+KP NI++ +T
Sbjct: 130 NFSHQN-GIIHRDVKPANIMISAT 152
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY LG+G S V LA D R VA+K+ + A A+ + + N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALN 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
++ + D + P G +V+E++ LR I ++ + + E+ L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQAL 129
Query: 157 DYLHRELGIIHTDLKPENILLVST 180
++ H+ GIIH D+KP NI++ +T
Sbjct: 130 NFSHQN-GIIHRDVKPANIMISAT 152
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY LG+G S V LA D R VA+K+ + A A+ + + N
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALN 87
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
++ + D + P G +V+E++ LR I ++ + + E+ L
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQAL 146
Query: 157 DYLHRELGIIHTDLKPENILLVST 180
++ H+ GIIH D+KP NI++ +T
Sbjct: 147 NFSHQN-GIIHRDVKPANIMISAT 169
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMWSFACTAFEL 306
DM K+ DFG A + +F E + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 178 DMDVKIGDFGLATKI--EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 307 ATGDMLF 313
G F
Sbjct: 236 LVGKPPF 242
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMWSFACTAFEL 306
DM K+ DFG A + +F E + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 178 DMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 307 ATGDMLF 313
G F
Sbjct: 236 LVGKPPF 242
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMWSFACTAFEL 306
DM K+ DFG A + +F E + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 178 DMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 307 ATGDMLF 313
G F
Sbjct: 236 LVGKPPF 242
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+++A G
Sbjct: 228 IYQMAAG 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 252 DMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
DM K+ DFG A + ++ + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 162 DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLV 221
Query: 309 GDMLF 313
G F
Sbjct: 222 GKPPF 226
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADG 92
+Y K+G G F V+ A +T VALK ++ F AL EI++L +
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 93 DPSN--EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICK 150
+ N E C + + + G + +V +F L L+ K L++++ + +
Sbjct: 78 NVVNLIEICRTKASPYNRCKG----SIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQ 132
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLV 178
+L GL Y+HR I+H D+K N+L+
Sbjct: 133 MLLNGLYYIHRN-KILHRDMKAANVLIT 159
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY LG+G S V LA D R VA+K+ + A A+ + + N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALN 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
++ + D + P G +V+E++ LR I ++ + + E+ L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQAL 129
Query: 157 DYLHRELGIIHTDLKPENILLVST 180
++ H+ GIIH D+KP NI++ +T
Sbjct: 130 NFSHQN-GIIHRDVKPANIMISAT 152
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEI--EVLSAVADGDPSNEKCVI 101
LG G F+ V+ A T VA+K+ A + + + EV PS ++
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS----IL 74
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L ++F+ + ++ +VLE + + +R K N+ R I+TG+ YLH
Sbjct: 75 ELYNYFE----DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 162 ELGIIHTDLKPENILLVSTID 182
GI+H DL N+LL ++
Sbjct: 131 H-GILHRDLTLSNLLLTRNMN 150
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQ---TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+M K+ DFG A + + T Y +PE+ R+ + D+WS C + L
Sbjct: 148 NMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI 207
Query: 309 G 309
G
Sbjct: 208 G 208
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 242 PKPERCLDGI-DM-RCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 299
P P+R + I D+ K +D G C E + T QY APE++ + Y+ +VD WSF
Sbjct: 156 PGPQRLIHKIIDLGYAKELDQGELC------TEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 300 ACTAFELATGDMLFAP 315
AFE TG F P
Sbjct: 210 GTLAFECITGFRPFLP 225
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 36 GRYIAQRKLGWGQFSIV--WLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGD 93
G + + +LG G F V W+ DT + Q+ + + + EI+++ + +
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL---N 70
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKY 151
N + D + PN L + +E+ GD L ++ GL+ +R +
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 152 ILTGLDYLHRELGIIHTDLKPENILL 177
I + L YLH E IIH DLKPENI+L
Sbjct: 130 ISSALRYLH-ENRIIHRDLKPENIVL 154
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVL 86
V VGD +Y K+G G V+ A D T VA++ Q + Q + L E+L
Sbjct: 13 VSVGD--PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIR-QMNLQQQPKKELIINEIL 69
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
+ +P+ ++ +D + G L +V+E+L G SL ++ + ++ ++
Sbjct: 70 VMRENKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET---CMDEGQI 118
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILL 177
+C+ L L++LH +IH D+K +NILL
Sbjct: 119 AAVCRECLQALEFLHSN-QVIHRDIKSDNILL 149
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 243 KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 299
K + L G+D K+ DFG + +E + T + APEV+ R Y VD+WS
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 300 ACTAFELATGD 310
A E+ G+
Sbjct: 203 GIMAIEMIEGE 213
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 242 PKPERCLDGI-DM-RCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 299
P P+R + I D+ K +D G C E + T QY APE++ + Y+ +VD WSF
Sbjct: 157 PGPQRLIHKIIDLGYAKELDQGELC------TEFVGTLQYLAPELLEQKKYTVTVDYWSF 210
Query: 300 ACTAFELATGDMLFAP 315
AFE TG F P
Sbjct: 211 GTLAFECITGFRPFLP 226
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 36 GRYIAQRKLGWGQFSIV--WLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGD 93
G + + +LG G F V W+ DT + Q+ + + + EI+++ + +
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL---N 71
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKY 151
N + D + PN L + +E+ GD L ++ GL+ +R +
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 152 ILTGLDYLHRELGIIHTDLKPENILL 177
I + L YLH E IIH DLKPENI+L
Sbjct: 131 ISSALRYLH-ENRIIHRDLKPENIVL 155
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVL 86
V VGD +Y K+G G V+ A D T VA++ Q + Q + L E+L
Sbjct: 13 VSVGD--PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIR-QMNLQQQPKKELIINEIL 69
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
+ +P+ ++ +D + G L +V+E+L G SL ++ + ++ ++
Sbjct: 70 VMRENKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET---CMDEGQI 118
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILL 177
+C+ L L++LH +IH D+K +NILL
Sbjct: 119 AAVCRECLQALEFLHSN-QVIHRDIKSDNILL 149
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 299
K + L G+D K+ DFG + + ++ + T + APEV+ R Y VD+WS
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 300 ACTAFELATGD 310
A E+ G+
Sbjct: 203 GIMAIEMIEGE 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVL 86
V VGD +Y K+G G V+ A D T VA++ Q + Q + L E+L
Sbjct: 13 VSVGD--PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIR-QMNLQQQPKKELIINEIL 69
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
+ +P+ ++ +D + G L +V+E+L G SL ++ + ++ ++
Sbjct: 70 VMRENKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET---CMDEGQI 118
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILL 177
+C+ L L++LH +IH D+K +NILL
Sbjct: 119 AAVCRECLQALEFLHSN-QVIHRDIKSDNILL 149
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 299
K + L G+D K+ DFG + + ++ + T + APEV+ R Y VD+WS
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 300 ACTAFELATGD 310
A E+ G+
Sbjct: 203 GIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVL 86
V VGD +Y K+G G V+ A D T VA++ Q + Q + L E+L
Sbjct: 14 VSVGD--PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIR-QMNLQQQPKKELIINEIL 70
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
+ +P+ ++ +D + G L +V+E+L G SL ++ + ++ ++
Sbjct: 71 VMRENKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET---CMDEGQI 119
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILL 177
+C+ L L++LH +IH D+K +NILL
Sbjct: 120 AAVCRECLQALEFLHSN-QVIHRDIKSDNILL 150
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 299
K + L G+D K+ DFG + + ++ + T + APEV+ R Y VD+WS
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 300 ACTAFELATGD 310
A E+ G+
Sbjct: 204 GIMAIEMIEGE 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADG 92
+Y K+G G F V+ A +T VALK ++ F AL EI++L +
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 93 DPSN--EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICK 150
+ N E C + + + G + +V +F L L+ K L++++ + +
Sbjct: 78 NVVNLIEICRTKASPYNRCKG----SIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQ 132
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLV 178
+L GL Y+HR I+H D+K N+L+
Sbjct: 133 MLLNGLYYIHRN-KILHRDMKAANVLIT 159
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G F V+ D RT VA+KI + A + EI VLS +C
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS----------QC 82
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
+ + + L +++E+L G S L L++ L+ ++ I + IL GLDY
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDY 139
Query: 159 LHRELGIIHTDLKPENILL 177
LH E IH D+K N+LL
Sbjct: 140 LHSEKK-IHRDIKAANVLL 157
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 254 RCKVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 310
K+ DFG A + + Q + T + APEVI ++ Y D+WS TA ELA G+
Sbjct: 162 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 24/141 (17%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
K+G G IV LA + + VA+K+ Q + L NE ++R
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF--------------NEVVIMR 97
Query: 103 LIDHFK-----HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
HF + G+ L +++EFL G +L ++ R L ++ +C+ +L L
Sbjct: 98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQAL 154
Query: 157 DYLHRELGIIHTDLKPENILL 177
YLH + G+IH D+K ++ILL
Sbjct: 155 AYLHAQ-GVIHRDIKSDSILL 174
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 299
K + L +D R K+ DFG + +K + + T + APEVI R+ Y+ VD+WS
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSL 227
Query: 300 ACTAFELATGD 310
E+ G+
Sbjct: 228 GIMVIEMVDGE 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADG 92
+Y K+G G F V+ A +T VALK ++ F AL EI++L +
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 93 DPSN--EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICK 150
+ N E C + + + G + +V +F L L+ K L++++ + +
Sbjct: 77 NVVNLIEICRTKASPYNRCKG----SIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQ 131
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLV 178
+L GL Y+HR I+H D+K N+L+
Sbjct: 132 MLLNGLYYIHRN-KILHRDMKAANVLIT 158
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G F V+ D RT VA+KI + A + EI VLS +C
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS----------QC 77
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
+ + + L +++E+L G S L L++ L+ ++ I + IL GLDY
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDY 134
Query: 159 LHRELGIIHTDLKPENILL 177
LH E IH D+K N+LL
Sbjct: 135 LHSEKK-IHRDIKAANVLL 152
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 254 RCKVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 310
K+ DFG A + + Q + T + APEVI ++ Y D+WS TA ELA G+
Sbjct: 157 EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G F V+ D RT VA+KI + A + EI VLS +C
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS----------QC 62
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
+ + + L +++E+L G S L L++ L+ ++ I + IL GLDY
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDY 119
Query: 159 LHRELGIIHTDLKPENILL 177
LH E IH D+K N+LL
Sbjct: 120 LHSEKK-IHRDIKAANVLL 137
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 254 RCKVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 310
K+ DFG A + + Q + T + APEVI ++ Y D+WS TA ELA G+
Sbjct: 142 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G F V+ D RT VA+KI + A + EI VLS +C
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS----------QC 62
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
+ + + L +++E+L G S L L++ L+ ++ I + IL GLDY
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDY 119
Query: 159 LHRELGIIHTDLKPENILL 177
LH E IH D+K N+LL
Sbjct: 120 LHSEKK-IHRDIKAANVLL 137
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 254 RCKVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 310
K+ DFG A + + Q + T + APEVI ++ Y D+WS TA ELA G+
Sbjct: 142 EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE + +V DFG A R + T +Y APE+I+ GY+ +VD W+
Sbjct: 168 KPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+++
Sbjct: 154 FEYLH-SLDLIYRDLKPENLII 174
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVL 86
+V D ++ G +LG GQF+IV + T Y A I+K ++ ++ + E+
Sbjct: 9 KVEDFYDIGE-----ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
V+ VI L D ++ N + ++LE + G L + ++ + L +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
K IL G++YLH + I H DLKPENI+L+ P
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIP 154
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 255 CKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
K++DFG A +F T ++ APE++ DMWS + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 313 FAPKSGQ 319
F + Q
Sbjct: 218 FLGDTKQ 224
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
++LG GQF VW+ Y S+ VA+K K QA L E ++ + ++
Sbjct: 19 KRLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL------QHDKLV 71
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
RL P + ++ E++ SLL +K + L K+ + I G+ Y+
Sbjct: 72 RLYAVVTREEP----IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 127
Query: 161 RELGIIHTDLKPENILLVSTI 181
R+ IH DL+ N+L+ ++
Sbjct: 128 RK-NYIHRDLRAANVLVSESL 147
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF +E+ T
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVL 86
+V D ++ G +LG GQF+IV + T Y A I+K ++ ++ + E+
Sbjct: 9 KVEDFYDIGE-----ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
V+ VI L D ++ N + ++LE + G L + ++ + L +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
K IL G++YLH + I H DLKPENI+L+ P
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIP 154
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 255 CKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
K++DFG A +F T ++ APE++ DMWS + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 313 FAPKSGQ 319
F + Q
Sbjct: 218 FLGDTKQ 224
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVL 86
+V D ++ G +LG GQF+IV + T Y A I+K ++ ++ + E+
Sbjct: 9 KVEDFYDIGE-----ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
V+ VI L D ++ N + ++LE + G L + ++ + L +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
K IL G++YLH + I H DLKPENI+L+ P
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIP 154
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 255 CKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
K++DFG A +F T ++ APE++ DMWS + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 313 FAPKSGQ 319
F + Q
Sbjct: 218 FLGDTKQ 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVL 86
+V D ++ G +LG GQF+IV + T Y A I+K ++ ++ + E+
Sbjct: 9 KVEDFYDIGE-----ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
V+ VI L D ++ N + ++LE + G L + ++ + L +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
K IL G++YLH + I H DLKPENI+L+ P
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIP 154
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 255 CKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
K++DFG A +F T ++ APE++ DMWS + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 313 FAPKSGQ 319
F + Q
Sbjct: 218 FLGDTKQ 224
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWS 298
KPE L K+ DFG A + + +E+ TR YRAPE+++ Y +VD+W+
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWA 210
Query: 299 FACTAFELATGDMLFAPKS 317
C E+ G+ LF S
Sbjct: 211 IGCLVTEMFMGEPLFPGDS 229
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADGDPSNEKCV 100
+G G + +V + T VA+K + A+ EI++L + + +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL------RHENL 86
Query: 101 IRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ L++ K + +V EF+ ++L ++ GL+ V++ I+ G+ + H
Sbjct: 87 VNLLEVCK----KKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH 141
Query: 161 RELGIIHTDLKPENILLVST 180
IIH D+KPENIL+ +
Sbjct: 142 SH-NIIHRDIKPENILVSQS 160
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADG 92
+Y K+G G F V+ A +T VALK ++ F AL EI++L +
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL--- 74
Query: 93 DPSNEKCVIRLIDHFK-HAGPNGQ---HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREI 148
+ V+ LI+ + A P + + +V +F L L+ K L++++ +
Sbjct: 75 ---KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRV 130
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ +L GL Y+HR I+H D+K N+L+
Sbjct: 131 MQMLLNGLYYIHRN-KILHRDMKAANVLIT 159
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVL 86
+V D ++ G +LG GQF+IV + T Y A I+K ++ ++ + E+
Sbjct: 9 KVEDFYDIGE-----ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
V+ VI L D ++ N + ++LE + G L + ++ + L +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
K IL G++YLH + I H DLKPENI+L+ P
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIP 154
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 255 CKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
K++DFG A +F T ++ APE++ DMWS + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 313 FAPKSGQ 319
F + Q
Sbjct: 218 FLGDTKQ 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQ---TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D+ K+ DFG A + + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 309 GDMLF 313
G F
Sbjct: 213 GKPPF 217
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 127 SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
SLL L + R K L + R + I+ G YLHR +IH DLK N+ L
Sbjct: 103 SLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFL 150
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQ---TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D+ K+ DFG A + + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 157 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 216
Query: 309 GDMLF 313
G F
Sbjct: 217 GKPPF 221
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 127 SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
SLL L + R K L + R + I+ G YLHR +IH DLK N+ L
Sbjct: 107 SLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFL 154
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T +Y AP +IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQ---TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D+ K+ DFG A + + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 309 GDMLF 313
G F
Sbjct: 213 GKPPF 217
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 127 SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
SLL L + R K L + R + I+ G YLHR +IH DLK N+ L
Sbjct: 103 SLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFL 150
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLL 148
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 47 GQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105
G F V+ A + TS A K I + + + + EI++L++ + +++L+D
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC------DHPNIVKLLD 74
Query: 106 HFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGI 165
F + +L +++EF + + + L ++++ +CK L L+YLH I
Sbjct: 75 AFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN-KI 129
Query: 166 IHTDLKPENILLV 178
IH DLK NIL
Sbjct: 130 IHRDLKAGNILFT 142
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 251 IDMRCKVVDFGNACRANKQFAEE----IQTRQYRAPEVIL-----RAGYSFSVDMWSFAC 301
+D K+ DFG + + + + I T + APEV++ Y + D+WS
Sbjct: 143 LDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 202
Query: 302 TAFELA 307
T E+A
Sbjct: 203 TLIEMA 208
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCV 100
++G G F V+ D T VA+KI + A + EI VLS +C
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLS----------QCD 75
Query: 101 IRLIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
I + + L +++E+LG S L L+K LE + I + IL GLDYL
Sbjct: 76 SPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYL 132
Query: 160 HRELGIIHTDLKPENILL 177
H E IH D+K N+LL
Sbjct: 133 HSERK-IHRDIKAANVLL 149
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 255 CKVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 310
K+ DFG A + + Q + T + APEVI ++ Y F D+WS TA ELA G+
Sbjct: 155 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLL 148
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLL 148
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T + APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSF----VGTAQYVSPELLTEKSASKS 214
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 104 IDHFKHAGPNGQHLCMVLE-----FLGDSLLR---LIKYSRYKG-LELNKVREICKYILT 154
+DH P L + + G S + L+KY R G + R I++
Sbjct: 89 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVS 143
Query: 155 GLDYLHRELGIIHTDLKPENILL 177
L+YLH + GIIH DLKPENILL
Sbjct: 144 ALEYLHGK-GIIHRDLKPENILL 165
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D+ K+ DFG A + + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 177 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236
Query: 309 GDMLF 313
G F
Sbjct: 237 GKPPF 241
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 127 SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
SLL L + R K L + R + I+ G YLHR +IH DLK N+ L
Sbjct: 127 SLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFL 174
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
Y +LG GQF++V + T Y A I+K + ++ V+ D
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------RGVSREDIER 63
Query: 97 EKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICK 150
E +++ I H N + ++LE + G L + + + L + E K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLV 178
IL G+ YLH L I H DLKPENI+L+
Sbjct: 122 QILNGVYYLHS-LQIAHFDLKPENIMLL 148
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 8 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 53
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 111
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 112 EEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 147
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 151 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 202 IGVITYILLSGASPFLGDTKQ 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 29/93 (31%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRAN----------------------------KQFAEEI 274
KP CL D K+ DFG A N KQ +
Sbjct: 158 KPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHV 217
Query: 275 QTRQYRAPEVI-LRAGYSFSVDMWSFACTAFEL 306
TR YRAPE+I L+ Y+ S+D+WS C EL
Sbjct: 218 VTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFA-----QAALHEIEVLSAVADG 92
Y + +G G + V+LAYD + VA+K K F + L EI +L+ +
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIK--KVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 93 DPSNEKCVIRLIDHF-KHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
+IRL D L +VLE L +L K + L V+ I
Sbjct: 88 ------YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEQHVKTILYN 139
Query: 152 ILTGLDYLHRELGIIHTDLKPENILL 177
+L G ++H E GIIH DLKP N LL
Sbjct: 140 LLLGEKFIH-ESGIIHRDLKPANCLL 164
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLL 148
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D+ K+ DFG A + + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 175 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 234
Query: 309 GDMLF 313
G F
Sbjct: 235 GKPPF 239
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 127 SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
SLL L + R K L + R + I+ G YLHR +IH DLK N+ L
Sbjct: 125 SLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFL 172
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 8 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 53
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 111
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 112 EEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 147
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 151 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 202 IGVITYILLSGASPFLGDTKQ 222
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLL 148
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 256 KVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGD 310
K+ DFG A RA +QF EI T YR PE++L + YS SVD+WS AC E+
Sbjct: 177 KIGDFGLA-RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
Query: 311 MLF 313
LF
Sbjct: 236 PLF 238
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGD 93
RY KLG G + V+ A DT T+ VA+K ++ A+ E+ +L + +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
K VI H H L ++ E+ + L + + + + + ++ ++
Sbjct: 95 IIELKSVI----HHNH------RLHLIFEYAENDLKKYM--DKNPDVSMRVIKSFLYQLI 142
Query: 154 TGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188
G+++ H +H DLKP+N+LL S D S+ P+
Sbjct: 143 NGVNFCHSR-RCLHRDLKPQNLLL-SVSDASETPV 175
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D+ K+ DFG A + + T Y APEV+ + G+SF VD+WS C + L
Sbjct: 151 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210
Query: 309 GDMLF 313
G F
Sbjct: 211 GKPPF 215
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 127 SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
SLL L + R K L + R + I+ G YLHR +IH DLK N+ L
Sbjct: 101 SLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFL 148
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
K+G G IV +A + T VA+K Q + L NE ++R
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF--------------NEVVIMR 97
Query: 103 LIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
H + G L +V+EFL G +L ++ ++R + ++ +C +L L
Sbjct: 98 DYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRAL 154
Query: 157 DYLHRELGIIHTDLKPENILLVS 179
YLH + G+IH D+K ++ILL S
Sbjct: 155 SYLHNQ-GVIHRDIKSDSILLTS 176
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D R K+ DFG + +K+ + + T + APEVI R Y VD+WS E+
Sbjct: 177 DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 236
Query: 309 GD 310
G+
Sbjct: 237 GE 238
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL------RAGYSFSV 294
KPE L DM K+ DFG +C+ + ++ E T Y APE+I GY V
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 295 DMWSFACTAFELATGDMLF 313
DMWS + L G F
Sbjct: 211 DMWSTGVIMYTLLAGSPPF 229
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----------QKSAAQFAQAALHEIEVLS 87
Y + LG G S+V T A+KI + + +A L E+++L
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYK-GLELNKVR 146
V+ G P+ +I+L D ++ +V + + L Y K L + R
Sbjct: 79 KVS-GHPN----IIQLKDTYE----TNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETR 127
Query: 147 EICKYILTGLDYLHRELGIIHTDLKPENILL 177
+I + +L + LH+ L I+H DLKPENILL
Sbjct: 128 KIMRALLEVICALHK-LNIVHRDLKPENILL 157
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVL 86
V VGD +Y K+G G V+ A D T VA++ Q + Q + L E+L
Sbjct: 14 VSVGD--PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIR-QMNLQQQPKKELIINEIL 70
Query: 87 SAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV 145
+ +P+ ++ +D + G L +V+E+L G SL ++ + ++ ++
Sbjct: 71 VMRENKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET---CMDEGQI 119
Query: 146 REICKYILTGLDYLHRELGIIHTDLKPENILL 177
+C+ L L++LH +IH ++K +NILL
Sbjct: 120 AAVCRECLQALEFLHSN-QVIHRNIKSDNILL 150
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 299
K + L G+D K+ DFG + + ++ + T + APEV+ R Y VD+WS
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 300 ACTAFELATGD 310
A E+ G+
Sbjct: 204 GIMAIEMIEGE 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
G Y+ LG G F V + T VA+KI L+ ++ S G
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKI-----------LNRQKIRSLDVVGKIK 59
Query: 96 NEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREI 148
E ++L H MV+E++ G+ + K+ R + +E R +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME---ARRL 116
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILL 177
+ IL+ +DY HR + ++H DLKPEN+LL
Sbjct: 117 FQQILSAVDYCHRHM-VVHRDLKPENVLL 144
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSF-SVDMWSF 299
KPE L M K+ DFG N + + + Y APEVI Y+ VD+WS
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSC 197
Query: 300 ACTAFELATGDMLF 313
+ L G + F
Sbjct: 198 GVILYALLCGTLPF 211
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL------RAGYSFSV 294
KPE L DM K+ DFG +C+ + ++ E T Y APE+I GY V
Sbjct: 138 KPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 197
Query: 295 DMWSFACTAFELATGDMLF 313
DMWS + L G F
Sbjct: 198 DMWSTGVIMYTLLAGSPPF 216
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----------QKSAAQFAQAALHEIEVLS 87
Y + LG G S+V T A+KI + + +A L E+++L
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYK-GLELNKVR 146
V+ G P+ +I+L D ++ +V + + L Y K L + R
Sbjct: 66 KVS-GHPN----IIQLKDTYE----TNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETR 114
Query: 147 EICKYILTGLDYLHRELGIIHTDLKPENILL 177
+I + +L + LH+ L I+H DLKPENILL
Sbjct: 115 KIMRALLEVICALHK-LNIVHRDLKPENILL 144
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
G Y+ LG G F V + T VA+KI L+ ++ S G
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKI-----------LNRQKIRSLDVVGKIK 59
Query: 96 NEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREI 148
E ++L H MV+E++ G+ + K+ R + +E R +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME---ARRL 116
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILL 177
+ IL+ +DY HR + ++H DLKPEN+LL
Sbjct: 117 FQQILSAVDYCHRHM-VVHRDLKPENVLL 144
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSF-SVDMWSF 299
KPE L M K+ DFG N + + Y APEVI Y+ VD+WS
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSC 197
Query: 300 ACTAFELATGDMLF 313
+ L G + F
Sbjct: 198 GVILYALLCGTLPF 211
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI-QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
LG G ++ V A + A+KI +K A E+E L K ++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQC-----QGNKNILE 75
Query: 103 LIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
LI+ F+ + +V E L G S+L I+ + K + + + + LD+LH
Sbjct: 76 LIEFFE----DDTRFYLVFEKLQGGSILAHIQ--KQKHFNEREASRVVRDVAAALDFLHT 129
Query: 162 ELGIIHTDLKPENILLVS 179
+ GI H DLKPENIL S
Sbjct: 130 K-GIAHRDLKPENILCES 146
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L +V DFG A R + T + APE+IL GY+ +VD W+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVL 227
Query: 303 AFELATG 309
+E+A G
Sbjct: 228 IYEMAAG 234
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQA--ALHEIEVLSAVADGDPSNE 97
+ LG G F V L + ++ A+KI ++ + Q L+E +L AV N
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NF 100
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+++L FK + +L MV+E++ G+ L + R+ R I+
Sbjct: 101 PFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLT 153
Query: 156 LDYLHRELGIIHTDLKPENILL 177
+YLH L +I+ DLKPEN+L+
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLI 174
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF---AQAALHEIEVLSAVAD 91
G Y +G G + +V A T VA+K +A A+ L E+++L
Sbjct: 54 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREIC 149
+ +I + D + P G+ + +VL+ + L ++I S + L L VR
Sbjct: 114 DN------IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFL 165
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILL 177
+L GL Y+H +IH DLKP N+L+
Sbjct: 166 YQLLRGLKYMH-SAQVIHRDLKPSNLLV 192
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 243 KPERCLDGIDMRCKVVDFGNA-----CRANKQF--AEEIQTRQYRAPEVILRAG-YSFSV 294
KP L + K+ DFG A A Q+ E + TR YRAPE++L Y+ ++
Sbjct: 186 KPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAI 245
Query: 295 DMWSFACTAFELATGDMLFAPKS 317
D+WS C E+ LF K+
Sbjct: 246 DLWSVGCIFGEMLARRQLFPGKN 268
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 252 DMRCKVVDFGNACRANKQFA------EEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAF 304
D+ K+ DFG A + ++ E + T+ YR+P ++L Y+ ++DMW+ C
Sbjct: 157 DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 305 ELATGDMLFA 314
E+ TG LFA
Sbjct: 217 EMLTGKTLFA 226
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 42/169 (24%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVAL-KIQKSAAQFAQAALHEIEVLSAVADGD 93
G RY+ + LG G +V+ A D VA+ KI + Q + AL EI+
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIK--------- 60
Query: 94 PSNEKCVIRLIDH------FKHAGPNGQHLC-------------MVLEFLGDSLLRLIKY 134
+IR +DH F+ GP+G L +V E++ L +++
Sbjct: 61 ------IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE- 113
Query: 135 SRYKGLELNKVREICKY-ILTGLDYLHRELGIIHTDLKPENILLVSTID 182
+G L + + Y +L GL Y+H ++H DLKP N L ++T D
Sbjct: 114 ---QGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPAN-LFINTED 157
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
G YI LG G F V + T VA+KI L+ ++ S G
Sbjct: 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKI-----------LNRQKIRSLDVVGKIR 64
Query: 96 NEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREI 148
E ++L H + MV+E++ G+ + K R L+ + R +
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRL 121
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILL 177
+ IL+G+DY HR + ++H DLKPEN+LL
Sbjct: 122 FQQILSGVDYCHRHM-VVHRDLKPENVLL 149
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMWSF 299
KPE L M K+ DFG N + + Y APEVI Y+ VD+WS
Sbjct: 143 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSS 202
Query: 300 ACTAFELATGDMLF 313
+ L G + F
Sbjct: 203 GVILYALLCGTLPF 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKS-AAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
LG G+F V +T T +A KI K+ + + +EI V++ + D +N +I+
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL---DHAN---LIQ 150
Query: 103 LIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L D F+ + + +V+E++ G L I Y EL+ + K I G+ ++H
Sbjct: 151 LYDAFE----SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMH- 204
Query: 162 ELGIIHTDLKPENILLVS 179
++ I+H DLKPENIL V+
Sbjct: 205 QMYILHLDLKPENILCVN 222
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 243 KPER--CLDGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
KPE C++ + K++DFG A R ++ T ++ APEV+ SF DMWS
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWS 273
Query: 299 FACTAFELATG 309
A+ L +G
Sbjct: 274 VGVIAYMLLSG 284
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 91
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 92 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 149
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 150 YLHGK-GIIHRDLKPENILL 168
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 162 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 217
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 218 SDLWALGCIIYQLVAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 147 YLHGK-GIIHRDLKPENILL 165
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 214
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 65
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 123
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 124 YLHGK-GIIHRDLKPENILL 142
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 136 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 191
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 192 SDLWALGCIIYQLVAG 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 147 YLHGK-GIIHRDLKPENILL 165
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 214
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 147 YLHGK-GIIHRDLKPENILL 165
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSAXKS 214
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 89
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 148 YLHGK-GIIHRDLKPENILL 166
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 215
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 216 SDLWALGCIIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 86
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 145 YLHGK-GIIHRDLKPENILL 163
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANAF----VGTAQYVSPELLTEKSACKS 212
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 213 SDLWALGCIIYQLVAG 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF---AQAALHEIEVLSAVAD 91
G Y +G G + +V A T VA+K +A A+ L E+++L
Sbjct: 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREIC 149
+ +I + D + P G+ + +VL+ + L ++I S + L L VR
Sbjct: 113 DN------IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFL 164
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILL 177
+L GL Y+H +IH DLKP N+L+
Sbjct: 165 YQLLRGLKYMH-SAQVIHRDLKPSNLLV 191
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 243 KPERCLDGIDMRCKVVDFGNA-----CRANKQF--AEEIQTRQYRAPEVILRAG-YSFSV 294
KP L + K+ DFG A A Q+ E + TR YRAPE++L Y+ ++
Sbjct: 185 KPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAI 244
Query: 295 DMWSFACTAFELATGDMLFAPKS 317
D+WS C E+ LF K+
Sbjct: 245 DLWSVGCIFGEMLARRQLFPGKN 267
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 147 YLHGK-GIIHRDLKPENILL 165
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 214
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 89
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 148 YLHGK-GIIHRDLKPENILL 166
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSF----VGTAQYVSPELLTEKSACKS 215
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 216 SDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 86
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 145 YLHGK-GIIHRDLKPENILL 163
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 212
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 213 SDLWALGCIIYQLVAG 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 209 AGCVLAELLLGQPIFPGDSG 228
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K F L + L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL----------D 71
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ ++ R+ + YSR K L + V+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 132 FRSLAYIH-SFGICHRDIKPQNLLL 155
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 24 YHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHE 82
+ +V D ++ G +LG GQF+IV + T Y A I+K ++ ++ +
Sbjct: 5 FKQQKVEDFYDIGE-----ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCR 59
Query: 83 IEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
E+ V+ +I L D ++ N + ++LE + G L + ++ + L
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLS 113
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
+ K IL G++YLH + I H DLKPENI+L+ P
Sbjct: 114 EEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIP 154
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 256 KVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K++DFG A +F T ++ APE++ DMWS + L +G F
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 314 APKSGQ 319
+ Q
Sbjct: 219 LGDTKQ 224
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 86
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 145 YLHGK-GIIHRDLKPENILL 163
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 212
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 213 SDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 147 YLHGK-GIIHRDLKPENILL 165
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 214
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 39/151 (25%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAA--LHEIEVLSAVADGDPSNEKCV 100
LG G F V D T A+K I K++A+ + L E+E+L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL-------------- 75
Query: 101 IRLIDHFKHAGPNGQHLCMVLE-----------FLGDSLL-RLIKYSRYKGLELNKVREI 148
+ +DH PN L +LE + G L +IK R+ E + R I
Sbjct: 76 -KKLDH-----PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAAR-I 126
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILLVS 179
K + +G+ Y+H+ I+H DLKPENILL S
Sbjct: 127 IKQVFSGITYMHKH-NIVHRDLKPENILLES 156
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 243 KPERCL---DGIDMRCKVVDFG-NAC-RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
KPE L D K++DFG + C + N + + I T Y APEV LR Y D+W
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVW 206
Query: 298 SFACTAFELATGDMLFAPKS 317
S + L +G F K+
Sbjct: 207 SAGVILYILLSGTPPFYGKN 226
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 256 KVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGD 310
K+ DFG + R N T QY APE+I + GY + D+WS CT E+ATG
Sbjct: 163 KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
Query: 311 MLF 313
F
Sbjct: 223 PPF 225
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 34 NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADG 92
NG R + LG G + IV+ D +A+K I + ++++Q EI + +
Sbjct: 24 NGDRVV----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL--- 76
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK--VREICK 150
K +++ + F NG + + G SL L++ S++ L+ N+ + K
Sbjct: 77 ---KHKNIVQYLGSFSE---NGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTK 129
Query: 151 YILTGLDYLHRELGIIHTDLKPENILL 177
IL GL YLH + I+H D+K +N+L+
Sbjct: 130 QILEGLKYLH-DNQIVHRDIKGDNVLI 155
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 153 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 212
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 213 AGCVLAELLLGQPIFPGDSG 232
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 75
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 76 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 136 FRSLAYIH-SFGICHRDIKPQNLLL 159
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 209 AGCVLAELLLGQPIFPGDSG 228
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 71
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 132 FRSLAYIH-SFGICHRDIKPQNLLL 155
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 256 KVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGD 310
K+ DFG + R N T QY APE+I + GY + D+WS CT E+ATG
Sbjct: 149 KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
Query: 311 MLF 313
F
Sbjct: 209 PPF 211
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 18/147 (12%)
Query: 34 NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADG 92
NG R + LG G + IV+ D +A+K I + ++++Q EI + +
Sbjct: 10 NGDRVV----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL--- 62
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNK--VREICK 150
K +++ + F NG + + G SL L++ S++ L+ N+ + K
Sbjct: 63 ---KHKNIVQYLGSFSE---NGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTK 115
Query: 151 YILTGLDYLHRELGIIHTDLKPENILL 177
IL GL YLH I+H D+K +N+L+
Sbjct: 116 QILEGLKYLHDNQ-IVHRDIKGDNVLI 141
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 209 AGCVLAELLLGQPIFPGDSG 228
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 71
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 132 FRSLAYIH-SFGICHRDIKPQNLLL 155
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 64
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 122
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 123 YLHGK-GIIHRDLKPENILL 141
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 190
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 191 SDLWALGCIIYQLVAG 206
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 150 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 209
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 210 AGCVLAELLLGQPIFPGDSG 229
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 72
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 73 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 133 FRSLAYIH-SFGICHRDIKPQNLLL 156
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 209 AGCVLAELLLGQPIFPGDSG 228
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 71
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 132 FRSLAYIH-SFGICHRDIKPQNLLL 155
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 63
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 121
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 122 YLHGK-GIIHRDLKPENILL 140
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 134 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 189
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 190 SDLWALGCIIYQLVAG 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 66
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 124
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 125 YLHGK-GIIHRDLKPENILL 143
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 137 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 192
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 193 SDLWALGCIIYQLVAG 208
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 157 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 216
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 217 AGCVLAELLLGQPIFPGDSG 236
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 79
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 80 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 140 FRSLAYIH-SFGICHRDIKPQNLLL 163
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 168 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 227
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 228 AGCVLAELLLGQPIFPGDSG 247
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 90
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 91 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 151 FRSLAYIH-SFGICHRDIKPQNLLL 174
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 161 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 221 AGCVLAELLLGQPIFPGDSG 240
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 83
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 144 FRSLAYIH-SFGICHRDIKPQNLLL 167
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 161 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 221 AGCVLAELLLGQPIFPGDSG 240
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 83
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 144 FRSLAYIH-SFGICHRDIKPQNLLL 167
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 85
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 144 YLHGK-GIIHRDLKPENILL 162
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSF----VGTAQYVSPELLTEKSACKS 211
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 212 SDLWALGCIIYQLVAG 227
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 95
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 96 --ILRLYGYFHDAT----RVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 146
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 147 LSYCHSK-RVIHRDIKPENLLLGSA 170
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A +++ T Y PE+I + VD+WS
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 221 LCYEFLVGKPPFEANTYQ 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 85
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 144 YLHGK-GIIHRDLKPENILL 162
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 211
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 212 SDLWALGCIIYQLVAG 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN---- 73
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K SR+ + + +
Sbjct: 74 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSRF---DEQRTATYITELANA 124
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 125 LSYCHSK-RVIHRDIKPENLLLGSN 148
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G + K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 139 KPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 199 LCYEFLVGMPPFEAHTYQ 216
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 183 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 243 AGCVLAELLLGQPIFPGDSG 262
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 105
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 166 FRSLAYIH-SFGICHRDIKPQNLLL 189
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 93
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 94 LDHPFFVKLYFCFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 151
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 152 YLHGK-GIIHRDLKPENILL 170
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 164 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 219
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 220 SDLWALGCIIYQLVAG 235
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
RY LG+G S V LA D R VA+K+ + A A+ + + N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALN 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
++ + + P G +V+E++ LR I ++ + + E+ L
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQAL 129
Query: 157 DYLHRELGIIHTDLKPENILLVST 180
++ H+ GIIH D+KP NI++ +T
Sbjct: 130 NFSHQN-GIIHRDVKPANIMISAT 152
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS V LA + TS A+KI L + ++ + E+ V+
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 70
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 128
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 129 YLHGK-GIIHRDLKPENILL 147
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 141 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 196
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 197 SDLWALGCIIYQLVAG 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN---- 73
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K SR+ + + +
Sbjct: 74 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSRF---DEQRTATYITELANA 124
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 125 LSYCHSK-RVIHRDIKPENLLLGSN 148
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G + K+ DFG + A + + T Y PE+I + VD+WS
Sbjct: 139 KPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 199 LCYEFLVGMPPFEAHTYQ 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG G+F++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 209 AGCVLAELLLGQPIFPGDSG 228
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K F L + L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL----------D 71
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 132 FRSLAYIH-SFGICHRDIKPQNLLL 155
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 95
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 96 --ILRLYGYFHDAT----RVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 146
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 147 LSYCHSK-RVIHRDIKPENLLLGS 169
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 221 LCYEFLVGKPPFEANTYQ 238
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 209 AGCVLAELLLGQPIFPGDSG 228
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K F L + L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL----------D 71
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 132 FRSLAYIH-SFGICHRDIKPQNLLL 155
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 109
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 169
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 170 FRSLAYIH-SFGICHRDIKPQNLLL 193
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 187 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 246
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 247 AGCVLAELLLGQPIFPGDSG 266
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 209 AGCVLAELLLGQPIFPGDSG 228
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 71
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 132 FRSLAYIH-SFGICHRDIKPQNLLL 155
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRT-SSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
Y +LG GQF+IV T Y A I+K ++ + E+ V
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+I L D F+ N + ++LE + G L + + + L ++ + K IL G
Sbjct: 88 HPNIITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDG 141
Query: 156 LDYLHRELGIIHTDLKPENILLVSTIDPS 184
+ YLH + I H DLKPENI+L+ P+
Sbjct: 142 VHYLHSK-RIAHFDLKPENIMLLDKNVPN 169
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 254 RCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 311
R K++DFG A + A +F T ++ APE++ DMWS + L +G
Sbjct: 171 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 230
Query: 312 LFAPKSGQ 319
F ++ Q
Sbjct: 231 PFLGETKQ 238
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 105
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 166 FRSLAYIH-SFGICHRDIKPQNLLL 189
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 183 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 243 AGCVLAELLLGQPIFPGDSG 262
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRT-SSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
Y +LG GQF+IV T Y A I+K ++ + E+ V
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+I L D F+ N + ++LE + G L + + + L ++ + K IL G
Sbjct: 67 HPNIITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDG 120
Query: 156 LDYLHRELGIIHTDLKPENILLVSTIDPS 184
+ YLH + I H DLKPENI+L+ P+
Sbjct: 121 VHYLHSK-RIAHFDLKPENIMLLDKNVPN 148
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 254 RCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 311
R K++DFG A + A +F T ++ APE++ DMWS + L +G
Sbjct: 150 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 209
Query: 312 LFAPKSGQ 319
F ++ Q
Sbjct: 210 PFLGETKQ 217
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRT-SSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
Y +LG GQF+IV T Y A I+K ++ + E+ V
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+I L D F+ N + ++LE + G L + + + L ++ + K IL G
Sbjct: 74 HPNIITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDG 127
Query: 156 LDYLHRELGIIHTDLKPENILLVSTIDPS 184
+ YLH + I H DLKPENI+L+ P+
Sbjct: 128 VHYLHSK-RIAHFDLKPENIMLLDKNVPN 155
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 254 RCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 311
R K++DFG A + A +F T ++ APE++ DMWS + L +G
Sbjct: 157 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 312 LFAPKSGQ 319
F ++ Q
Sbjct: 217 PFLGETKQ 224
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 154 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 213
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 214 AGCVLAELLLGQPIFPGDSG 233
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 76
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 77 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 136
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 137 FRSLAYIH-SFGICHRDIKPQNLLL 160
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 107
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 108 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 167
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 168 FRSLAYIH-SFGICHRDIKPQNLLL 191
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 185 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 244
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 245 AGCVLAELLLGQPIFPGDSG 264
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 150
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 210
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 211 FRSLAYIH-SFGICHRDIKPQNLLL 234
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 228 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 287
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 288 AGCVLAELLLGQPIFPGDSG 307
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 162 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 221
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 222 AGCVLAELLLGQPIFPGDSG 241
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 84
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 85 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 145 FRSLAYIH-SFGICHRDIKPQNLLL 168
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G F +V+ A + VA+K +F L + L +
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL----------D 99
Query: 98 KC-VIRLIDHFKHAGPNGQ--HLCMVLEFLGDSLLRLIK-YSRYK-GLELNKVREICKYI 152
C ++RL F +G +L +VL+++ +++ R+ + YSR K L + V+ +
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 159
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L Y+H GI H D+KP+N+LL
Sbjct: 160 FRSLAYIH-SFGICHRDIKPQNLLL 183
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 243 KPERCLDGIDMRC-KVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
KP+ L D K+ DFG+A + + I +R YRAPE+I A Y+ S+D+WS
Sbjct: 177 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 236
Query: 299 FACTAFELATGDMLFAPKSG 318
C EL G +F SG
Sbjct: 237 AGCVLAELLLGQPIFPGDSG 256
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCV 100
+ +LG G SIV+ T ALK+ K + EI VL ++ + +
Sbjct: 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSHPN------I 110
Query: 101 IRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
I+L + F+ + +VLE + G+ R+++ Y + + K IL + Y
Sbjct: 111 IKLKEIFE----TPTEISLVLELVTGGELFDRIVEKGYYSERD---AADAVKQILEAVAY 163
Query: 159 LHRELGIIHTDLKPENILLVSTIDPSKD-PIRS---GLTPILE 197
LH E GI+H DLKPEN+L + P+ D P++ GL+ I+E
Sbjct: 164 LH-ENGIVHRDLKPENLLYAT---PAPDAPLKIADFGLSKIVE 202
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Query: 243 KPERCLDGI---DMRCKVVDFGNACRANKQFAEEI--QTRQYRAPEVILRAGYSFSVDMW 297
KPE L D K+ DFG + Q + T Y APE++ Y VDMW
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMW 234
Query: 298 SFACTAFELATGDMLFAPKSGQGF 321
S + L G F + G F
Sbjct: 235 SVGIITYILLCGFEPFYDERGDQF 258
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWS 298
KPE L K+ DFG A + + +E+ TR YR+PE+++ Y VD+W+
Sbjct: 129 KPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWA 188
Query: 299 FACTAFELATGDMLFAPKS 317
C EL +G L+ KS
Sbjct: 189 IGCVFAELLSGVPLWPGKS 207
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
K+G G + +V+ + T VA+K + + AL EI +L + +
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN------ 63
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLR-LIKYSRYKGLELNKVREICKYILTGLDY 158
++ L++ F+ + L +V E+ ++L L +Y R G+ + V+ I L +++
Sbjct: 64 LVNLLEVFR----RKRRLHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNF 117
Query: 159 LHRELGIIHTDLKPENILLVS 179
H+ IH D+KPENIL+
Sbjct: 118 CHKH-NCIHRDVKPENILITK 137
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH----EIEVLSAVADGDPSNE 97
R LG G+F V+LA + + +ALK+ + + H EIE+ S + +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN---- 76
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++R+ ++F + + + ++LEF G+ L K+ R+ + + + +
Sbjct: 77 --ILRMYNYFH----DRKRIYLMLEFAPRGELYKELQKHGRF---DEQRSATFMEELADA 127
Query: 156 LDYLHRELGIIHTDLKPENILL 177
L Y H E +IH D+KPEN+L+
Sbjct: 128 LHYCH-ERKVIHRDIKPENLLM 148
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+W
Sbjct: 142 KPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 201
Query: 302 TAFELATG 309
+E G
Sbjct: 202 LCYEFLVG 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 86
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 87 --ILRLYGYFHDAT----RVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 137
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 138 LSYCHSK-RVIHRDIKPENLLLGS 160
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 152 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 211
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 212 LCYEFLVGKPPFEANTYQ 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 30/160 (18%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG GQF++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLL--------RLIKY-SRYK 138
V+ D E +++ I H PN L V E D +L L + + +
Sbjct: 55 GVSREDIEREVSILKEIQH-----PNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE 109
Query: 139 GLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
L + E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 69
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 70 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 120
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 121 LSYCHSK-RVIHRDIKPENLLLGS 143
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 195 LCYEFLVGKPPFEANTYQ 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 72
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 73 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 123
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 124 LSYCHSK-RVIHRDIKPENLLLGSA 147
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + + A T Y PE+I + VD+WS
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 198 LCYEFLVGKPPFEANTYQ 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH----EIEVLSAVADGDPSNE 97
R LG G+F V+LA + + +ALK+ + + H EIE+ S + +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN---- 75
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++R+ ++F + + + ++LEF G+ L K+ R+ + + + +
Sbjct: 76 --ILRMYNYFH----DRKRIYLMLEFAPRGELYKELQKHGRF---DEQRSATFMEELADA 126
Query: 156 LDYLHRELGIIHTDLKPENILL 177
L Y H E +IH D+KPEN+L+
Sbjct: 127 LHYCH-ERKVIHRDIKPENLLM 147
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+W
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 302 TAFELATG 309
+E G
Sbjct: 201 LCYEFLVG 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 69
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 70 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 120
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 121 LSYCHSK-RVIHRDIKPENLLLGS 143
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A E+ T Y PE+I + VD+WS
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 195 LCYEFLVGKPPFEANTYQ 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 255 CKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 311
K+ DFG A + A+ I T + APEVI GY+ D+WS TA E+A G
Sbjct: 164 AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKP 223
Query: 312 LFA 314
+A
Sbjct: 224 PYA 226
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
KLG G + V+ A T VA+K Q Q + EI ++ + V
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIK-QVPVESDLQEIIKEISIMQQC-----DSPHVVKY 89
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRE 162
+FK+ L +V+E+ G + I R K L +++ I + L GL+YLH
Sbjct: 90 YGSYFKNTD-----LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF- 143
Query: 163 LGIIHTDLKPENILL 177
+ IH D+K NILL
Sbjct: 144 MRKIHRDIKAGNILL 158
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 302
KPE L + K+ DFG A T Y APEV+ Y+ S+D WSF
Sbjct: 133 KPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 192
Query: 303 AFELATGDMLFAPKSGQGFCEDEVGWFCIFICFFVDPLQHDIRDVINSCM 352
+E+ G F + E + F FF D++D+++ +
Sbjct: 193 IYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFF----NEDVKDLLSRLI 238
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKS--AAQFAQAALHEIEVLSAVADGDPSNEKC 99
R LG G F V L Y A+K+ K + Q E L P
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP----F 67
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNK--VREICKYILTGL 156
+IR+ F+ A Q + M+++++ G L L++ S+ + K E+C L
Sbjct: 68 IIRMWGTFQDA----QQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC----LAL 119
Query: 157 DYLHRELGIIHTDLKPENILL 177
+YLH + II+ DLKPENILL
Sbjct: 120 EYLHSK-DIIYRDLKPENILL 139
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH----EIEVLSAVADGDPSNE 97
R LG G+F V+LA + + +ALK+ + + H EIE+ S + +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN---- 75
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++R+ ++F + + + ++LEF G+ L K+ R+ + + + +
Sbjct: 76 --ILRMYNYFH----DRKRIYLMLEFAPRGELYKELQKHGRF---DEQRSATFMEELADA 126
Query: 156 LDYLHRELGIIHTDLKPENILL 177
L Y H E +IH D+KPEN+L+
Sbjct: 127 LHYCH-ERKVIHRDIKPENLLM 147
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+W
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 302 TAFELATG 309
+E G
Sbjct: 201 LCYEFLVG 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 243 KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 293
KPE L DM ++ DFG A RAN + T QY +PE++ S
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 212
Query: 294 VDMWSFACTAFELATG 309
D+W+ C ++L G
Sbjct: 213 SDLWALGCIIYQLVAG 228
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 20/140 (14%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G FS LA + TS A+KI L + ++ + E+ V+
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 86
Query: 104 IDH-----FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG-LELNKVREICKYILTGLD 157
+DH + + L L + + L+KY R G + R I++ L+
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 158 YLHRELGIIHTDLKPENILL 177
YLH + GIIH DLKPENILL
Sbjct: 145 YLHGK-GIIHRDLKPENILL 163
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 74
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 75 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 125
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 126 LSYCHSK-RVIHRDIKPENLLLGS 148
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 200 LCYEFLVGKPPFEANTYQ 217
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 70
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 71 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 121
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 122 LSYCHSK-RVIHRDIKPENLLLGS 144
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-TRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG +C A + T Y PE+I + VD+WS
Sbjct: 136 KPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 196 LCYEFLVGKPPFEANTYQ 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 72
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 73 --ILRLYGYFHDAT----RVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 123
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 124 LSYCHSK-RVIHRDIKPENLLLGS 146
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 198 LCYEFLVGKPPFEANTYQ 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 71
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 72 --ILRLYGYFHDAT----RVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 122
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 123 LSYCHSK-RVIHRDIKPENLLLGS 145
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ +FG + A + T Y PE+I + VD+WS
Sbjct: 137 KPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 197 LCYEFLVGKPPFEANTYQ 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G FSI +++ A+KI + + EI L + +G P+
Sbjct: 14 LKDKPLGEGSFSICRKCVHKKSNQAFAVKI--ISKRMEANTQKEITALK-LCEGHPN--- 67
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
+++L + F + H +V+E L G L IK + K + I + +++ +
Sbjct: 68 -IVKLHEVFH----DQLHTFLVMELLNGGELFERIK--KKKHFSETEASYIMRKLVSAVS 120
Query: 158 YLHRELGIIHTDLKPENILLVSTID 182
++H ++G++H DLKPEN+L D
Sbjct: 121 HMH-DVGVVHRDLKPENLLFTDEND 144
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 243 KPERCL---DGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 296
KPE L + ++ K++DFG A N+ T Y APE++ + GY S D+
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDL 192
Query: 297 WSFACTAFELATGDMLF 313
WS + + +G + F
Sbjct: 193 WSLGVILYTMLSGQVPF 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 70
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 71 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 121
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 122 LSYCHSK-RVIHRDIKPENLLLGS 144
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + + T Y PE+I + VD+WS
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 196 LCYEFLVGKPPFEANTYQ 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 70
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 71 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 121
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 122 LSYCHSK-RVIHRDIKPENLLLGS 144
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A ++ T Y PE+I + VD+WS
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 196 LCYEFLVGKPPFEANTYQ 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL------RAGYSFSV 294
KPE L DM K+ DFG +C+ + ++ T Y APE+I GY V
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 295 DMWSFACTAFELATGDMLF 313
DMWS + L G F
Sbjct: 211 DMWSTGVIMYTLLAGSPPF 229
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKI----------QKSAAQFAQAALHEIEVLS 87
Y + LG G S+V T A+KI + + +A L E+++L
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYK-GLELNKVR 146
V+ G P+ +I+L D ++ +V + + L Y K L + R
Sbjct: 79 KVS-GHPN----IIQLKDTYE----TNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETR 127
Query: 147 EICKYILTGLDYLHRELGIIHTDLKPENILL 177
+I + +L + LH+ L I+H DLKPENILL
Sbjct: 128 KIMRALLEVICALHK-LNIVHRDLKPENILL 157
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 74
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 75 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 125
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 126 LSYCHSK-RVIHRDIKPENLLLGS 148
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE I + VD+WS
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGV 199
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 200 LCYEFLVGKPPFEANTYQ 217
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 74
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 75 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 125
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 126 LSYCHSK-RVIHRDIKPENLLLGS 148
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A ++ T Y PE+I + VD+WS
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 200 LCYEFLVGKPPFEANTYQ 217
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 73
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 74 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 124
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 125 LSYCHSK-RVIHRDIKPENLLLGS 147
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 139 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 199 LCYEFLVGKPPFEANTYQ 216
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 72
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 73 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 123
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 124 LSYCHSK-RVIHRDIKPENLLLGSA 147
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A +++ T Y PE+I + VD+WS
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 198 LCYEFLVGKPPFEANTYQ 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 71
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 72 --ILRLYGYFHDAT----RVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 122
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 123 LSYCHSK-RVIHRDIKPENLLLGSA 146
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 137 KPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 197 LCYEFLVGKPPFEANTYQ 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y Q+ +G G F+ V LA T VA+KI + Q E+ ++ +
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKIL--- 71
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +V+E+ G+ L+ + R K E R +
Sbjct: 72 ---NHPNIVKLFEVIE----TEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---ARAKFR 121
Query: 151 YILTGLDYLHRELGIIHTDLKPENILL 177
I++ + Y H++ I+H DLK EN+LL
Sbjct: 122 QIVSAVQYCHQKY-IVHRDLKAENLLL 147
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 247 CLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSF-SVDMWSFACTA 303
LDG DM K+ DFG N + + Y APE+ Y VD+WS
Sbjct: 146 LLDG-DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 304 FELATGDMLFAPKSGQGFCE 323
+ L +G + P GQ E
Sbjct: 205 YTLVSGSL---PFDGQNLKE 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 72
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 73 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 123
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 124 LSYCHSK-RVIHRDIKPENLLLGS 146
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ +FG + A + T Y PE+I + VD+WS
Sbjct: 138 KPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 198 LCYEFLVGKPPFEANTYQ 215
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 69
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 70 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 120
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 121 LSYCHSK-RVIHRDIKPENLLLGSA 144
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A ++ T Y PE+I + VD+WS
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 195 LCYEFLVGKPPFEANTYQ 212
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 101 IRLIDHFKHAG-------------PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVRE 147
IRL++HF H P L +V E + L ++I R + ++
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV-ISPQHIQY 138
Query: 148 ICKYILTGLDYLHRELGIIHTDLKPENILLVSTID 182
+IL GL LH E G++H DL P NILL D
Sbjct: 139 FMYHILLGLHVLH-EAGVVHRDLHPGNILLADNND 172
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 262 NACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLF 313
+ ANK + R YRAPE++++ G++ VDMWS C E+ LF
Sbjct: 184 DTADANK--THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 101 IRLIDHFKHAG-------------PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVRE 147
IRL++HF H P L +V E + L ++I R + ++
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV-ISPQHIQY 138
Query: 148 ICKYILTGLDYLHRELGIIHTDLKPENILLVSTID 182
+IL GL LH E G++H DL P NILL D
Sbjct: 139 FMYHILLGLHVLH-EAGVVHRDLHPGNILLADNND 172
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 262 NACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLF 313
+ ANK + R YRAPE++++ G++ VDMWS C E+ LF
Sbjct: 184 DTADANK--THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 69
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 70 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 120
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 121 LSYCHSK-RVIHRDIKPENLLLGS 143
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A ++ T Y PE+I + VD+WS
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 195 LCYEFLVGKPPFEANTYQ 212
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 235 SMGGIELP---------KPERCL-DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAP 282
S+G + LP KP L + D K+ DFG+A + ++ I +R YRAP
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200
Query: 283 EVIL-RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQG 320
E+I Y+ +VD+WS C E+ G+ +F + G
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG 239
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
R+ +R G G F V L + T VA+K +F L ++ L+ + +
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPN--- 80
Query: 97 EKCVIRLIDHFKHAGPNGQ---HLCMVLEFLGDSLLRLIK--YSRYKGLELNKVREICKY 151
+++L +F G + +L +V+E++ D+L R + Y R ++
Sbjct: 81 ---IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 152 ILTGLDYLH-RELGIIHTDLKPENILL 177
++ + LH + + H D+KP N+L+
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLV 164
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH---------EIEVLS 87
+Y LG G F VW A D + V +K K + EI +LS
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVRE 147
V + +I+++D F++ G +V+E G L R+ L+
Sbjct: 85 RVEHAN------IIKVLDIFENQG----FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY 134
Query: 148 ICKYILTGLDYLHRELGIIHTDLKPENILL 177
I + +++ + YL R IIH D+K ENI++
Sbjct: 135 IFRQLVSAVGYL-RLKDIIHRDIKDENIVI 163
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 248 LDGIDMRCKVVDFGNAC--------RANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
L G D ++ DFG + NK + T + APEV+ + GY F D+WS
Sbjct: 148 LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWS 207
Query: 299 FACTAFELATG 309
F TA ELATG
Sbjct: 208 FGITAIELATG 218
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 22/155 (14%)
Query: 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAV 89
N Y Q +G G ++V AY VA+K ++K + L EI+ +S
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMS-- 63
Query: 90 ADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKG------LEL 142
+C I + + L +V++ L G S+L +IK+ KG L+
Sbjct: 64 --------QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 143 NKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+ + I + +L GL+YLH+ G IH D+K NILL
Sbjct: 116 STIATILREVLEGLEYLHKN-GQIHRDVKAGNILL 149
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 69
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 70 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 120
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 121 LSYCHSK-RVIHRDIKPENLLLGSA 144
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 195 LCYEFLVGKPPFEANTYQ 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 72
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 73 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 123
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 124 LSYCHSK-RVIHRDIKPENLLLGS 146
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 198 LCYEFLVGKPPFEANTYQ 215
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 39/151 (25%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAA--LHEIEVLSAVADGDPSNEKCV 100
LG G F V D T A+K I K++A+ + L E+E+L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL-------------- 75
Query: 101 IRLIDHFKHAGPNGQHLCMVLE-----------FLGDSLL-RLIKYSRYKGLELNKVREI 148
+ +DH PN L +LE + G L +IK R+ E + R I
Sbjct: 76 -KKLDH-----PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAAR-I 126
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILLVS 179
K + +G+ Y+H+ I+H DLKPENILL S
Sbjct: 127 IKQVFSGITYMHKH-NIVHRDLKPENILLES 156
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 243 KPERCL---DGIDMRCKVVDFG-NAC-RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
KPE L D K++DFG + C + N + + I T Y APEV LR Y D+W
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVW 206
Query: 298 SFACTAFELATGDMLFAPKS 317
S + L +G F K+
Sbjct: 207 SAGVILYILLSGTPPFYGKN 226
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 68
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 69 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 119
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 120 LSYCHSK-RVIHRDIKPENLLLGS 142
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 134 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 193
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 194 LCYEFLVGKPPFEANTYQ 211
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 69
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 70 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 120
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 121 LSYCHSK-RVIHRDIKPENLLLGSA 144
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + + A T Y PE+I + VD+WS
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 195 LCYEFLVGKPPFEANTYQ 212
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 39/151 (25%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAA--LHEIEVLSAVADGDPSNEKCV 100
LG G F V D T A+K I K++A+ + L E+E+L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL-------------- 75
Query: 101 IRLIDHFKHAGPNGQHLCMVLE-----------FLGDSLL-RLIKYSRYKGLELNKVREI 148
+ +DH PN L +LE + G L +IK R+ E + R I
Sbjct: 76 -KKLDH-----PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAAR-I 126
Query: 149 CKYILTGLDYLHRELGIIHTDLKPENILLVS 179
K + +G+ Y+H+ I+H DLKPENILL S
Sbjct: 127 IKQVFSGITYMHKH-NIVHRDLKPENILLES 156
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 243 KPERCL---DGIDMRCKVVDFG-NAC-RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
KPE L D K++DFG + C + N + + I T Y APEV LR Y D+W
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVW 206
Query: 298 SFACTAFELATGDMLFAPKS 317
S + L +G F K+
Sbjct: 207 SAGVILYILLSGTPPFYGKN 226
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 14/83 (16%)
Query: 100 VIRLIDHF-KHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY---ILTG 155
+ ++H +H P G +V+E++G L+ R KG +L V E Y IL
Sbjct: 144 IFNFVEHTDRHGDPVG---YIVMEYVGGQSLK-----RSKGQKL-PVAEAIAYLLEILPA 194
Query: 156 LDYLHRELGIIHTDLKPENILLV 178
L YLH +G+++ DLKPENI+L
Sbjct: 195 LSYLH-SIGLVYNDLKPENIMLT 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 69
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 70 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 120
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 121 LSYCHSK-RVIHRDIKPENLLLGS 143
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 195 LCYEFLVGKPPFEANTYQ 212
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 248 LDGIDMRCKVVDFGNAC--------RANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 298
L G D ++ DFG + NK + T + APEV+ + GY F D+WS
Sbjct: 153 LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWS 212
Query: 299 FACTAFELATG 309
F TA ELATG
Sbjct: 213 FGITAIELATG 223
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 22/155 (14%)
Query: 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAV 89
N Y Q +G G ++V AY VA+K ++K + L EI+ +S
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMS-- 68
Query: 90 ADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKG------LEL 142
+C I + + L +V++ L G S+L +IK+ KG L+
Sbjct: 69 --------QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 143 NKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+ + I + +L GL+YLH+ G IH D+K NILL
Sbjct: 121 STIATILREVLEGLEYLHKN-GQIHRDVKAGNILL 154
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSA 88
+G + N RY KLG G S V+LA DT + VA+K + + L E
Sbjct: 5 IGKIINE-RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFE--RE 61
Query: 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVRE 147
V + + + ++ +ID +V+E++ G +L I+ + L ++
Sbjct: 62 VHNSSQLSHQNIVSMID----VDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAIN 115
Query: 148 ICKYILTGLDYLHRELGIIHTDLKPENILLVST 180
IL G+ + H ++ I+H D+KP+NIL+ S
Sbjct: 116 FTNQILDGIKHAH-DMRIVHRDIKPQNILIDSN 147
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 72
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 73 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 123
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 124 LSYCHSK-RVIHRDIKPENLLLGSA 147
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 198 LCYEFLVGKPPFEANTYQ 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH-EIEVLSAVADGDPSN 96
Y +LG G F +V + T + A K + + + + EI+ +S +
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL------R 106
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV---REICKYI 152
++ L D F+ + + M+ EF+ G L + K E V R++CK
Sbjct: 107 HPTLVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK-- 160
Query: 153 LTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSI 203
GL ++H E +H DLKPENI+ + I GLT L+ P+ S+
Sbjct: 161 --GLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD-PKQSV 207
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 256 KVVDFGNACRANKQFAEEIQT--RQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
K++DFG + + + ++ T ++ APEV + DMWS ++ L +G
Sbjct: 191 KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH-EIEVLSAVADGDPSN 96
Y +LG G F +V + T + A K + + + + EI+ +S +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL------R 212
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKV---REICKYI 152
++ L D F+ + + M+ EF+ G L + K E V R++CK
Sbjct: 213 HPTLVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK-- 266
Query: 153 LTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSI 203
GL ++H E +H DLKPENI+ + I GLT L+ P+ S+
Sbjct: 267 --GLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD-PKQSV 313
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 256 KVVDFGNACRANKQFAEEIQT--RQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
K++DFG + + + ++ T ++ APEV + DMWS ++ L +G
Sbjct: 297 KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGD 93
+Y K+G G + V+ A + T VALK + +AL EI +L +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL---- 58
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
K ++RL D + + L +V EF L + S L+ V+ +L
Sbjct: 59 --KHKNIVRLHDVLH----SDKKLTLVFEFCDQDLKKYFD-SCNGDLDPEIVKSFLFQLL 111
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
GL + H ++H DLKP+N+L+
Sbjct: 112 KGLGFCHSR-NVLHRDLKPQNLLI 134
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 297
KP+ L + K+ +FG A RA + ++ E+ T YR P+V+ A YS S+DMW
Sbjct: 128 KPQNLLINRNGELKLANFGLA-RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 298 SFACTAFELATG 309
S C ELA
Sbjct: 187 SAGCIFAELANA 198
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 297
KP+ L + K+ DFG A RA + ++ E+ T YR P+V+ A YS S+DMW
Sbjct: 128 KPQNLLINRNGELKLADFGLA-RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 298 SFACTAFELATG 309
S C ELA
Sbjct: 187 SAGCIFAELANA 198
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGD 93
+Y K+G G + V+ A + T VALK + +AL EI +L +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL---- 58
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
K ++RL D + + L +V EF L + S L+ V+ +L
Sbjct: 59 --KHKNIVRLHDVLH----SDKKLTLVFEFCDQDLKKYFD-SCNGDLDPEIVKSFLFQLL 111
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
GL + H ++H DLKP+N+L+
Sbjct: 112 KGLGFCHSR-NVLHRDLKPQNLLI 134
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + + +ALK+ Q A E+E+ S + +
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 69
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F + + ++LE+ LG L K S++ + + +
Sbjct: 70 --ILRLYGYFH----DSTRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 120
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 121 LSYCHSK-KVIHRDIKPENLLLGSA 144
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + + A T Y PE+I + VD+WS
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 195 LCYEFLVGKPPFEANTYQ 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 74
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ G+ L K S++ + + +
Sbjct: 75 --ILRLYGYFHDA----TRVYLILEYAPRGEVYKELQKLSKF---DEQRTATYITELANA 125
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 126 LSYCHSK-RVIHRDIKPENLLLGS 148
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 200 LCYEFLVGKPPFEANTYQ 217
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 29 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 81
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 82 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 135
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 136 ERNYIHRDLRAANILVSDTL 155
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 155 LSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 28 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 80
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 81 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 134
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 135 ERNYIHRDLRAANILVSDTL 154
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 154 LSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLS 87
V D ++ G +LG G F++V + T Y A I+K + ++
Sbjct: 9 VDDYYDTGE-----ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------R 54
Query: 88 AVADGDPSNEKCVIRLIDH-----FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE 141
V+ D E +++ I H N + ++LE + G L + + + L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLT 112
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178
+ E K IL G+ YLH L I H DLKPENI+L+
Sbjct: 113 EEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 241 LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
+PKP R K++DFG A + + +F T ++ APE++ DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 299 FACTAFELATGDMLFAPKSGQ 319
+ L +G F + Q
Sbjct: 203 IGVITYILLSGASPFLGDTKQ 223
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 15 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 67
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 68 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 121
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 122 ERNYIHRDLRAANILVSDTL 141
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 141 LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 26 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 78
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 79 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 132
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 133 ERNYIHRDLRAANILVSDTL 152
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 152 LSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 22 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 74
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 75 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 128
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 129 ERNYIHRDLRAANILVSDTL 148
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 148 LSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
++LG GQF VW+ ++ VA+K K ++ L E +++ + ++
Sbjct: 15 KRLGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDK------LV 67
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+L +A + + + +V E++ SLL +K + L+L + ++ + G+ Y+
Sbjct: 68 QL-----YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 161 RELGIIHTDLKPENILL 177
R + IH DL+ NIL+
Sbjct: 123 R-MNYIHRDLRSANILV 138
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G + CK+ DFG A E RQ + APE L ++ D+WSF
Sbjct: 137 LVGNGLICKIADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 301 CTAFELAT 308
EL T
Sbjct: 194 ILLTELVT 201
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 20 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 72
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 73 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 127 ERNYIHRDLRAANILVSDTL 146
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 146 LSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 21 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 73
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 74 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 127
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 128 ERNYIHRDLRAANILVSDTL 147
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 147 LSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ +ALK+ Q A E+E+ S + +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 74
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ G+ L K S++ + + +
Sbjct: 75 --ILRLYGYFHDA----TRVYLILEYAPRGEVYKELQKLSKF---DEQRTATYITELANA 125
Query: 156 LDYLHRELGIIHTDLKPENILLVST 180
L Y H + +IH D+KPEN+LL S
Sbjct: 126 LSYCHSK-RVIHRDIKPENLLLGSA 149
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-TRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 200 LCYEFLVGKPPFEANTYQ 217
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 30 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 82
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 83 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 136
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 137 ERNYIHRDLRAANILVSDTL 156
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 156 LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 252 DMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELA 307
D K+ DFG C+ N + E T Y APE++L Y+ SVD WSF +E+
Sbjct: 155 DGHIKIADFG-MCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
Query: 308 TGDMLFAPKSGQ 319
G +P GQ
Sbjct: 214 IGQ---SPFHGQ 222
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF----AQAALHEIEVLSAVADGDPSN 96
+ LG G F V+LA +T+ + A+K K + + E VLS +
Sbjct: 23 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP--- 79
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILT 154
+ H ++L V+E+L GD + + ++ +L++ I+
Sbjct: 80 ------FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIIL 130
Query: 155 GLDYLHRELGIIHTDLKPENILL 177
GL +LH + GI++ DLK +NILL
Sbjct: 131 GLQFLHSK-GIVYRDLKLDNILL 152
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 25 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 77
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 78 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 131
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 132 ERNYIHRDLRAANILVSDTL 151
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 151 LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 26 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 78
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 79 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 132
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 133 ERNYIHRDLRAANILVSDTL 152
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 152 LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 20 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 72
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 73 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 127 ERNYIHRDLRAANILVSDTL 146
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 146 LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 20 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 72
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 73 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 127 ERNYIHRDLRAANILVSDTL 146
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 146 LSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ + + A E+E L A P
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVE-LHWRASQCPH--- 86
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 87 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 146 YLH-SINIAHRDVKPENLLYTS 166
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 174 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
Query: 314 APKSG 318
G
Sbjct: 234 YSNHG 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILRAGYSFSVDMWS 298
KPE + K+ DFG C+ + T +Y APE+++R+G++ +VD WS
Sbjct: 148 KPENIMLNHQGHVKLTDFG-LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWS 206
Query: 299 FACTAFELATG 309
+++ TG
Sbjct: 207 LGALMYDMLTG 217
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
K G+G+ V T A+K+ K A A D ++ K
Sbjct: 27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAK-------------DTAHTKAERN 73
Query: 103 LIDHFKH--------AGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKY- 151
+++ KH A G L ++LE+L G+ ++L + +G+ + C Y
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER----EGIFMEDT--ACFYL 127
Query: 152 --ILTGLDYLHRELGIIHTDLKPENILL 177
I L +LH++ GII+ DLKPENI+L
Sbjct: 128 AEISMALGHLHQK-GIIYRDLKPENIML 154
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI----QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
R LG G+F V+LA + + +ALK+ Q A E+E+ S + +
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN---- 66
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEF--LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
++RL +F A + ++LE+ LG L K S++ + + +
Sbjct: 67 --ILRLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANA 117
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L Y H + +IH D+KPEN+LL S
Sbjct: 118 LSYCHSK-RVIHRDIKPENLLLGS 140
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G K+ DFG + A + T Y PE+I + VD+WS
Sbjct: 132 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 191
Query: 302 TAFELATGDMLFAPKSGQ 319
+E G F + Q
Sbjct: 192 LCYEFLVGKPPFEANTYQ 209
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR---AGYSFSVDMW 297
KP+ L + DF A + Q T+ Y APE+ AGYSF+VD W
Sbjct: 142 KPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWW 201
Query: 298 SFACTAFELATG 309
S TA+EL G
Sbjct: 202 SLGVTAYELLRG 213
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 148 ICKYILTGLDYLHRELGIIHTDLKPENILL 177
IC+ ++ LDYL + IIH D+KP+NILL
Sbjct: 121 ICELVM-ALDYLQNQ-RIIHRDMKPDNILL 148
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ + + A E+E L A P
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVE-LHWRASQCPH--- 78
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 79 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 138 YLH-SINIAHRDVKPENLLYTS 158
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 166 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
Query: 314 APKSG 318
G
Sbjct: 226 YSNHG 230
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 243 KPERCLDGIDMRCKVVDFG-----------NACRANKQ--FAEEIQTRQYRAPEVIL-RA 288
KP L + KV DFG N+ +Q E + TR YRAPEV+L A
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSA 198
Query: 289 GYSFSVDMWSFACTAFEL 306
YS ++D+WS C EL
Sbjct: 199 KYSRAMDVWSCGCILAEL 216
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCV- 100
LG G + +V A T VA+K + + FA L EI++L +E +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-----KHENIIT 73
Query: 101 ---IRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
I+ D F+ N + ++ E + L R+I + L + ++ L +
Sbjct: 74 IFNIQRPDSFE----NFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVK 126
Query: 158 YLHRELGIIHTDLKPENILLVSTID 182
LH +IH DLKP N+L+ S D
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNCD 150
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ Q A E+E L A P
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKM----LQDCPKARREVE-LHWRASQCPH--- 72
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 73 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 132 YLH-SINIAHRDVKPENLLYTS 152
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 298
KPE + K+ DFG C+ + T +Y APE+++R+G++ +VD WS
Sbjct: 148 KPENIMLNHQGHVKLTDFG-LCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWS 206
Query: 299 FACTAFELATG 309
+++ TG
Sbjct: 207 LGALMYDMLTG 217
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
K G+G+ V T A+K+ K A A D ++ K
Sbjct: 27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAK-------------DTAHTKAERN 73
Query: 103 LIDHFKH--------AGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKY- 151
+++ KH A G L ++LE+L G+ ++L + +G+ + C Y
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER----EGIFMEDT--ACFYL 127
Query: 152 --ILTGLDYLHRELGIIHTDLKPENILL 177
I L +LH++ GII+ DLKPENI+L
Sbjct: 128 AEISMALGHLHQK-GIIYRDLKPENIML 154
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ + + A E+E L A P
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVE-LHWRASQCPH--- 76
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 77 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 136 YLH-SINIAHRDVKPENLLYTS 156
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 164 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
Query: 314 APKSG 318
G
Sbjct: 224 YSNHG 228
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA--------GYSFSVDMWSFACTAFE 305
K+ DFG A ++QF T +Y P++ RA Y +VD+WS T +
Sbjct: 156 KLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 306 LATGDMLFAPKSG 318
ATG + F P G
Sbjct: 216 AATGSLPFRPFEG 228
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V+ +T A+K+ S + + E EVL + N K ++
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL------NHKNIV 70
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+L + +H +++EF G L + S GL ++ + + ++ G+++L
Sbjct: 71 KLFAIEEET--TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 160 HRELGIIHTDLKPENILLV 178
RE GI+H ++KP NI+ V
Sbjct: 129 -RENGIVHRNIKPGNIMRV 146
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ + + A E+E L A P
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVE-LHWRASQCPH--- 77
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 78 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 137 YLH-SINIAHRDVKPENLLYTS 157
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 165 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
Query: 314 APKSG 318
G
Sbjct: 225 YSNHG 229
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 16/154 (10%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVAD 91
+ + RY + +G G F + L D T VA+K + A + EI ++
Sbjct: 16 MHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH 75
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREIC 149
+ I FK HL +++E+ G+ R+ R+ ++ R
Sbjct: 76 PN----------IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSE---DEARFFF 122
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
+ +L+G+ Y H + I H DLK EN LL + P
Sbjct: 123 QQLLSGVSYCH-SMQICHRDLKLENTLLDGSPAP 155
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 254 RCKVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAGYSFSV-DMWSFACTAFELATGD 310
R K+ DFG + + + Q + T Y APEV+LR Y + D+WS T + + G
Sbjct: 156 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA 215
Query: 311 MLF 313
F
Sbjct: 216 YPF 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ Q A E+E L A P
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALKM----LQDCPKARREVE-LHWRASQCPH--- 70
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 71 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 130 YLH-SINIAHRDVKPENLLYTS 150
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 158 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
Query: 314 APKSG 318
G
Sbjct: 218 YSNHG 222
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ + + A E+E L A P
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVE-LHWRASQCPH--- 71
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 72 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 131 YLH-SINIAHRDVKPENLLYTS 151
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 159 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
Query: 314 APKSG 318
G
Sbjct: 219 YSNHG 223
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y + +G G F+ V LA T VA+KI + + Q E+ ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL--- 70
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +V+E+ G+ L+ + R K E R +
Sbjct: 71 ---NHPNIVKLFEVIE----TEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---ARAKFR 120
Query: 151 YILTGLDYLHRELGIIHTDLKPENILL 177
I++ + Y H++ I+H DLK EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSF-SVDMW 297
K E L DM K+ DFG + F ++ T Y APE+ Y VD+W
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 298 SFACTAFELATGDMLFAPKSGQGFCE 323
S + L +G + P GQ E
Sbjct: 198 SLGVILYTLVSGSL---PFDGQNLKE 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSS-YVALKIQKSAAQFAQAALHEIEV 85
V+ G +++ Y +LG G F +V + T +VA I +EI +
Sbjct: 44 VKQGSVYD--YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI 101
Query: 86 LSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLE--- 141
++ + + +I L D F+ + + ++LEFL G L I YK E
Sbjct: 102 MNQL------HHPKLINLHDAFE----DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV 151
Query: 142 LNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176
+N +R+ C+ GL ++H E I+H D+KPENI+
Sbjct: 152 INYMRQACE----GLKHMH-EHSIVHLDIKPENIM 181
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 243 KPER--CLDGIDMRCKVVDFGNACRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWS 298
KPE C K++DFG A + N ++ T ++ APE++ R F DMW+
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 235
Query: 299 FACTAFELATGDMLFA 314
+ L +G FA
Sbjct: 236 IGVLGYVLLSGLSPFA 251
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y + +G G F+ V LA T VA+KI + + Q E+ ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL--- 70
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +V+E+ G+ L+ + R K E R +
Sbjct: 71 ---NHPNIVKLFEVIE----TEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---ARAKFR 120
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLVSTID 182
I++ + Y H++ I+H DLK EN+LL + ++
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLLDADMN 151
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSF-SVDMW 297
K E L DM K+ DFG + F ++ T Y APE+ Y VD+W
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 298 SFACTAFELATGDMLFAPKSGQGFCE 323
S + L +G + P GQ E
Sbjct: 198 SLGVILYTLVSGSL---PFDGQNLKE 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ + + A E+E L A P
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVE-LHWRASQCPH--- 72
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 73 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 132 YLH-SINIAHRDVKPENLLYTS 152
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 160 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Query: 314 APKSG 318
G
Sbjct: 220 YSNHG 224
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y + +G G F+ V LA T VA+KI + + Q E+ ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL--- 70
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +V+E+ G+ L+ + R K E R +
Sbjct: 71 ---NHPNIVKLFEVIE----TEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---ARAKFR 120
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLVSTID 182
I++ + Y H++ I+H DLK EN+LL + ++
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLLDADMN 151
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSF-SVDMWSF 299
K E L DM K+ DFG N + Y APE+ Y VD+WS
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 300 ACTAFELATGDMLFAPKSGQGFCE 323
+ L +G + P GQ E
Sbjct: 200 GVILYTLVSGSL---PFDGQNLKE 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ Q A E+E L A P
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKM----LQDCPKARREVE-LHWRASQCPH--- 116
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 117 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 176 YLH-SINIAHRDVKPENLLYTS 196
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 204 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
Query: 314 APKSG 318
G
Sbjct: 264 YSNHG 268
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ Q A E+E L A P
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALKM----LQDCPKARREVE-LHWRASQCPH--- 70
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 71 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 130 YLH-SINIAHRDVKPENLLYTS 150
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ E T Y APEV+ Y S DMWS + L G F
Sbjct: 158 KLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
Query: 314 APKSG 318
G
Sbjct: 218 YSNHG 222
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---------FAQAALHEIEVLS 87
+Y + +G G S+V T A+KI + A+ +A E +L
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLR---LIKYSRYK-GLELN 143
VA G P +I LID ++ + FL L+R L Y K L
Sbjct: 155 QVA-GHPH----IITLIDSYESSS---------FMFLVFDLMRKGELFDYLTEKVALSEK 200
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+ R I + +L + +LH I+H DLKPENILL
Sbjct: 201 ETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILL 233
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 243 KPERCLDGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVI------LRAGYSFSV 294
KPE L +M+ ++ DFG +C ++ E T Y APE++ GY V
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 295 DMWSFACTAFELATGDMLF 313
D+W+ F L G F
Sbjct: 287 DLWACGVILFTLLAGSPPF 305
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEI-EVLSAVADGDPSNEKCV 100
+ +G G FS V + +T A+KI + + E + +GD + +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD---RRWI 123
Query: 101 IRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+L HF N +L M GD L L K+ E+ R I+ +D +H
Sbjct: 124 TQL--HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM--ARFYLAEIVMAIDSVH 179
Query: 161 RELGIIHTDLKPENILL 177
R LG +H D+KP+NILL
Sbjct: 180 R-LGYVHRDIKPDNILL 195
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ Q A E+E L A P
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALKM----LQDCPKARREVE-LHWRASQCPH--- 122
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 123 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 182 YLH-SINIAHRDVKPENLLYTS 202
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 210 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
Query: 314 APKSG 318
G
Sbjct: 270 YSNHG 274
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK+ Q A E+E L A P
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKM----LQDCPKARREVE-LHWRASQCPH--- 72
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V+E L G L I+ + + EI K I +
Sbjct: 73 -IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 132 YLH-SINIAHRDVKPENLLYTS 152
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+ DFG A ++ T Y APEV+ Y S DMWS + L G F
Sbjct: 160 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Query: 314 APKSG 318
G
Sbjct: 220 YSNHG 224
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA--------GYSFSVDMWSFACTAFE 305
K+ DFG A ++QF T +Y P++ RA Y +VD+WS T +
Sbjct: 156 KLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 306 LATGDMLFAPKSG 318
ATG + F P G
Sbjct: 216 AATGSLPFRPFEG 228
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V+ +T A+K+ S + + E EVL + N K ++
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL------NHKNIV 70
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+L + +H +++EF G L + S GL ++ + + ++ G+++L
Sbjct: 71 KLFAIEEET--TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 160 HRELGIIHTDLKPENILLV 178
RE GI+H ++KP NI+ V
Sbjct: 129 -RENGIVHRNIKPGNIMRV 146
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 243 KPERCLDGIDMRCKVVDFG-----------NACRANKQ--FAEEIQTRQYRAPEVIL-RA 288
KP L + KV DFG N+ +Q E + TR YRAPEV+L A
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSA 198
Query: 289 GYSFSVDMWSFACTAFEL 306
YS ++D+WS C EL
Sbjct: 199 KYSRAMDVWSCGCILAEL 216
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCV- 100
LG G + +V A T VA+K + + FA L EI++L +E +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-----KHENIIT 73
Query: 101 ---IRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
I+ D F+ N + ++ E + L R+I + L + ++ L +
Sbjct: 74 IFNIQRPDSFE----NFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVK 126
Query: 158 YLHRELGIIHTDLKPENILLVSTID 182
LH +IH DLKP N+L+ S D
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNCD 150
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVAD 91
+ + RY + +G G F + L D +++ VA+K + + A EI ++ +
Sbjct: 15 MHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI--INHRSL 72
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREIC 149
P+ ++R FK HL +V+E+ G+ R+ R+ ++ R
Sbjct: 73 RHPN----IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFF 121
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
+ +++G+ Y H + + H DLK EN LL + P
Sbjct: 122 QQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAP 154
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + + A E + TR Y +PE + YS D+WS
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGL 194
Query: 302 TAFELATG 309
+ E+A G
Sbjct: 195 SLVEMAVG 202
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNS 143
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y APE + YS D+WS
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGL 201
Query: 302 TAFELATGDMLFAPKSGQ 319
+ ELA G P +
Sbjct: 202 SLVELAVGRYPIPPPDAK 219
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 125 GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179
G SL +++K ++ E+ + ++ +L GL YL + I+H D+KP NIL+ S
Sbjct: 98 GGSLDQVLKEAKRIPEEI--LGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS 150
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D R K+ DFG + +K+ + T + APE+I R Y VD+WS E+
Sbjct: 156 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 215
Query: 309 GD 310
G+
Sbjct: 216 GE 217
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172
G L +V+EFL G +L ++ ++R + ++ +C +L L LH + G+IH D+K
Sbjct: 93 GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKS 148
Query: 173 ENILL 177
++ILL
Sbjct: 149 DSILL 153
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D R K+ DFG + +K+ + T + APE+I R Y VD+WS E+
Sbjct: 206 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 265
Query: 309 GD 310
G+
Sbjct: 266 GE 267
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172
G L +V+EFL G +L ++ ++R + ++ +C +L L LH + G+IH D+K
Sbjct: 143 GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKS 198
Query: 173 ENILLV 178
++ILL
Sbjct: 199 DSILLT 204
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQ----KSAAQFAQAALHEIEVLSAVADGDPSNE 97
R++G G F V+ A D R S VA+K K + + Q + E+ L + +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 98 K-CVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
+ C +R +H +V+E+ S L++ + K L+ ++ + L GL
Sbjct: 120 RGCYLR-----EHTA------WLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGL 167
Query: 157 DYLHRELGIIHTDLKPENILL 177
YLH +IH D+K NILL
Sbjct: 168 AYLHSH-NMIHRDVKAGNILL 187
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 228 NISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEV 284
N+ R G I L +P G+ K+ DFG+A AN + T + APEV
Sbjct: 174 NMIHRDVKAGNILLSEP-----GL---VKLGDFGSASIMAPANXF----VGTPYWMAPEV 221
Query: 285 IL---RAGYSFSVDMWSFACTAFELA 307
IL Y VD+WS T ELA
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D R K+ DFG + +K+ + T + APE+I R Y VD+WS E+
Sbjct: 152 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 211
Query: 309 GD 310
G+
Sbjct: 212 GE 213
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172
G L +V+EFL G +L ++ ++R + ++ +C +L L LH + G+IH D+K
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKS 144
Query: 173 ENILL 177
++ILL
Sbjct: 145 DSILL 149
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTAFELA 307
D K+ DFG C+ N + T Y APE++L Y+ SVD WSF +E+
Sbjct: 154 DGHIKIADFG-MCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
Query: 308 TGDMLFAPKSGQ 319
G +P GQ
Sbjct: 213 IGQ---SPFHGQ 221
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF----AQAALHEIEVLSAVADGD 93
+I + LG G F V+LA +T+ + A+K K + + E VLS +
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKY 151
+ H ++L V+E+L GD + + ++ +L++
Sbjct: 79 ---------FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAE 126
Query: 152 ILTGLDYLHRELGIIHTDLKPENILL 177
I+ GL +LH + GI++ DLK +NILL
Sbjct: 127 IILGLQFLHSK-GIVYRDLKLDNILL 151
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 17/143 (11%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
+Y+ LG G+F IV +T + K K EI +L+
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH----- 60
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT-- 154
R I H + + + L M+ EF+ S L + + ELN+ REI Y+
Sbjct: 61 -----RNILHLHESFESMEELVMIFEFI--SGLDIFERINTSAFELNE-REIVSYVHQVC 112
Query: 155 -GLDYLHRELGIIHTDLKPENIL 176
L +LH I H D++PENI+
Sbjct: 113 EALQFLHSH-NIGHFDIRPENII 134
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
K+++FG A + F +Y APEV S + DMWS + L +G F
Sbjct: 144 KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203
Query: 314 APKSGQGFCED 324
++ Q E+
Sbjct: 204 LAETNQQIIEN 214
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D R K+ DFG + +K+ + T + APE+I R Y VD+WS E+
Sbjct: 161 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 220
Query: 309 GD 310
G+
Sbjct: 221 GE 222
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172
G L +V+EFL G +L ++ ++R + ++ +C +L L LH + G+IH D+K
Sbjct: 98 GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKS 153
Query: 173 ENILL 177
++ILL
Sbjct: 154 DSILL 158
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D R K+ DFG + +K+ + T + APE+I R Y VD+WS E+
Sbjct: 163 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 222
Query: 309 GD 310
G+
Sbjct: 223 GE 224
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172
G L +V+EFL G +L ++ ++R + ++ +C +L L LH + G+IH D+K
Sbjct: 100 GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKS 155
Query: 173 ENILL 177
++ILL
Sbjct: 156 DSILL 160
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176
L++NK R+I + I+ G+ YLH + GI+H DLK +N+
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVF 162
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 243 KPERCLDGIDMRCKVVDFG-----------NACRANKQ--FAEEIQTRQYRAPEVIL-RA 288
KP L + KV DFG N+ +Q E + TR YRAPEV+L A
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA 198
Query: 289 GYSFSVDMWSFACTAFEL 306
YS ++D+WS C EL
Sbjct: 199 KYSRAMDVWSCGCILAEL 216
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCV- 100
LG G + +V A T VA+K + + FA L EI++L +E +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-----KHENIIT 73
Query: 101 ---IRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
I+ D F+ N + ++ E + L R+I + L + ++ L +
Sbjct: 74 IFNIQRPDSFE----NFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVK 126
Query: 158 YLHRELGIIHTDLKPENILLVSTID 182
LH +IH DLKP N+L+ S D
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNCD 150
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 9/119 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y +PE + YS D+WS
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 302 TAFELATGDMLFAPKSGQGFCEDEVGWFCIFICFFVDP--------LQHDIRDVINSCM 352
+ E+A G P + + F + +P + +D +N C+
Sbjct: 192 SLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCL 250
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQ----KSAAQFAQAALHEIEVLSAVADGDPSNE 97
R++G G F V+ A D R S VA+K K + + Q + E+ L + +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 98 K-CVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
+ C +R +H +V+E+ S L++ + K L+ ++ + L GL
Sbjct: 81 RGCYLR-----EHTA------WLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGL 128
Query: 157 DYLHRELGIIHTDLKPENILL 177
YLH +IH D+K NILL
Sbjct: 129 AYLHSH-NMIHRDVKAGNILL 148
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 228 NISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEV 284
N+ R G I L +P G+ K+ DFG+A AN + T + APEV
Sbjct: 135 NMIHRDVKAGNILLSEP-----GL---VKLGDFGSASIMAPANXF----VGTPYWMAPEV 182
Query: 285 IL---RAGYSFSVDMWSFACTAFELA 307
IL Y VD+WS T ELA
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQF VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 16 RLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 68
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 69 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 122
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH +L+ NIL+ T+
Sbjct: 123 ERNYIHRNLRAANILVSDTL 142
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 253 MRCKVVDFGNA--CRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ CK+ DFG A N+ A E ++ APE I ++ D+WSF E+ T
Sbjct: 142 LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y + +G G F+ V LA T VA++I + + Q E+ ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL--- 70
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +V+E+ G+ L+ + R K E R +
Sbjct: 71 ---NHPNIVKLFEVIE----TEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---ARAKFR 120
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLVSTID 182
I++ + Y H++ I+H DLK EN+LL + ++
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLLDADMN 151
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSF-SVDMWSF 299
K E L DM K+ DFG N + E + Y APE+ Y VD+WS
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 300 ACTAFELATGDMLFAPKSGQGFCE 323
+ L +G + P GQ E
Sbjct: 200 GVILYTLVSGSL---PFDGQNLKE 220
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y + +G G F+ V LA T VA++I + + Q E+ ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL--- 70
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +V+E+ G+ L+ + R K E R +
Sbjct: 71 ---NHPNIVKLFEVIE----TEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---ARAKFR 120
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLVSTID 182
I++ + Y H++ I+H DLK EN+LL + ++
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLLDADMN 151
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSF-SVDMW 297
K E L DM K+ DFG + F ++ T Y APE+ Y VD+W
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 298 SFACTAFELATGDMLFAPKSGQGFCE 323
S + L +G + P GQ E
Sbjct: 198 SLGVILYTLVSGSL---PFDGQNLKE 220
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 252 DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
D R K+ DFG + +K+ + T + APE+I R Y VD+WS E+
Sbjct: 283 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 342
Query: 309 GD 310
G+
Sbjct: 343 GE 344
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172
G L +V+EFL G +L ++ ++R + ++ +C +L L LH + G+IH D+K
Sbjct: 220 GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKS 275
Query: 173 ENILLV 178
++ILL
Sbjct: 276 DSILLT 281
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT--RQYRAPEVILRAGYSFSVDMWSFA 300
KP G RCK+ DFG A E+Q +Y APE +L+ Y + D++S
Sbjct: 184 KPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPE-LLQGSYGTAADVFSLG 242
Query: 301 CTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICFFVDPLQHDIRDVI 348
T E+A L P G+G+ + G+ F L ++R V+
Sbjct: 243 LTILEVACNMEL--PHGGEGWQQLRQGY---LPPEFTAGLSSELRSVL 285
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVAD 91
+ + RY + +G G F + L D +++ VA+K + + + EI ++ +
Sbjct: 15 MHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI--INHRSL 72
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREIC 149
P+ ++R FK HL +V+E+ G+ R+ R+ ++ R
Sbjct: 73 RHPN----IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFF 121
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
+ +++G+ Y H + + H DLK EN LL + P
Sbjct: 122 QQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAP 154
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVAD 91
+ + RY + +G G F + L D +++ VA+K + + + EI ++ +
Sbjct: 15 MHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI--INHRSL 72
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREIC 149
P+ ++R FK HL +V+E+ G+ R+ R+ ++ R
Sbjct: 73 RHPN----IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFF 121
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
+ +++G+ Y H + + H DLK EN LL + P
Sbjct: 122 QQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAP 154
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 90 ADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVR--E 147
+D DP N K R + L + +EF L R +G +L+KV E
Sbjct: 91 SDYDPENSKNSSR---------SKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALE 140
Query: 148 ICKYILTGLDYLHRELGIIHTDLKPENILLVST 180
+ + I G+DY+H + +IH DLKP NI LV T
Sbjct: 141 LFEQITKGVDYIHSK-KLIHRDLKPSNIFLVDT 172
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVA 90
+F+ G Y+ + +G G +S T+ A+K I KS ++ EIE+L +
Sbjct: 24 VFSDG-YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE----EIEIL--LR 76
Query: 91 DGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICK 150
G N +I L D + +G+H+ +V E + L L K R K + +
Sbjct: 77 YGQHPN---IITLKDVYD----DGKHVYLVTELMRGGEL-LDKILRQKFFSEREASFVLH 128
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187
I ++YLH + G++H DLKP NIL V D S +P
Sbjct: 129 TIGKTVEYLHSQ-GVVHRDLKPSNILYV---DESGNP 161
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 256 KVVDFGNA--CRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
++ DFG A RA N T + APEV+ R GY D+WS + + G
Sbjct: 165 RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 313 FA 314
FA
Sbjct: 225 FA 226
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVA 90
+F+ G Y+ + +G G +S T+ A+K I KS ++ EIE+L +
Sbjct: 24 VFSDG-YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE----EIEIL--LR 76
Query: 91 DGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREIC 149
G N +I L D + +G+H+ +V E + G LL K R K + +
Sbjct: 77 YGQHPN---IITLKDVYD----DGKHVYLVTELMRGGELLD--KILRQKFFSEREASFVL 127
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187
I ++YLH + G++H DLKP NIL V D S +P
Sbjct: 128 HTIGKTVEYLHSQ-GVVHRDLKPSNILYV---DESGNP 161
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 256 KVVDFGNA--CRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
++ DFG A RA N T + APEV+ R GY D+WS + + G
Sbjct: 165 RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 313 FA 314
FA
Sbjct: 225 FA 226
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI + A+ + S V +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL------QNTRHPF 66
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K+A LC V+E+ L SR + + R I++ L+YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 164 GIIHTDLKPENILL 177
+++ D+K EN++L
Sbjct: 125 DVVYRDIKLENLML 138
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ ++ T +Y APEV+ Y +VD W
Sbjct: 132 KLENLMLDKDGHIKITDFG-LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFE 215
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVAD 91
+ + RY + +G G F + L D +++ VA+K + + + EI ++ +
Sbjct: 14 MHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI--INHRSL 71
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREIC 149
P+ ++R FK HL +V+E+ G+ R+ R+ ++ R
Sbjct: 72 RHPN----IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFF 120
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
+ +++G+ Y H + + H DLK EN LL + P
Sbjct: 121 QQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAP 153
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI + A+ + S V +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL------QNTRHPF 66
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K+A LC V+E+ L SR + + R I++ L+YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 164 GIIHTDLKPENILL 177
+++ D+K EN++L
Sbjct: 125 DVVYRDIKLENLML 138
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ ++T +Y APEV+ Y +VD W
Sbjct: 132 KLENLMLDKDGHIKITDFG-LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFE 215
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI + A+ + S V +
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL------QNTRHPF 69
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K+A LC V+E+ L SR + + R I++ L+YLH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSR- 127
Query: 164 GIIHTDLKPENILL 177
+++ D+K EN++L
Sbjct: 128 DVVYRDIKLENLML 141
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ ++T +Y APEV+ Y +VD W
Sbjct: 135 KLENLMLDKDGHIKITDFG-LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 193
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 194 LGVVMYEMMCGRLPFYNQDHERLFE 218
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI + A+ + S V +
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL------QNTRHPF 71
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K+A LC V+E+ L SR + + R I++ L+YLH
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSR- 129
Query: 164 GIIHTDLKPENILL 177
+++ D+K EN++L
Sbjct: 130 DVVYRDIKLENLML 143
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ ++ T +Y APEV+ Y +VD W
Sbjct: 137 KLENLMLDKDGHIKITDFG-LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 196 LGVVMYEMMCGRLPFYNQDHERLFE 220
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI + A+ + S V +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL------QNTRHPF 66
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K+A LC V+E+ L SR + + R I++ L+YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 164 GIIHTDLKPENILL 177
+++ D+K EN++L
Sbjct: 125 DVVYRDIKLENLML 138
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ ++T +Y APEV+ Y +VD W
Sbjct: 132 KLENLMLDKDGHIKITDFG-LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFE 215
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVAD 91
+ + RY + +G G F + L D + + VA+K + + + EI ++ +
Sbjct: 15 MHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI--INHRSL 72
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREIC 149
P+ ++R FK HL +V+E+ G+ R+ R+ ++ R
Sbjct: 73 RHPN----IVR----FKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFF 121
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
+ +++G+ Y H + + H DLK EN LL + P
Sbjct: 122 QQLISGVSYAH-AMQVAHRDLKLENTLLDGSPAP 154
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI + A+ + S V +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL------QNTRHPF 66
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K+A LC V+E+ L SR + + R I++ L+YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 164 GIIHTDLKPENILL 177
+++ D+K EN++L
Sbjct: 125 DVVYRDIKLENLML 138
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ ++ T +Y APEV+ Y +VD W
Sbjct: 132 KLENLMLDKDGHIKITDFG-LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFE 215
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V L + T Y A+KI + A+ + S V +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL------QNTRHPF 66
Query: 104 IDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL 163
+ K+A LC V+E+ L SR + + R I++ L+YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 164 GIIHTDLKPENILL 177
+++ D+K EN++L
Sbjct: 125 DVVYRDIKLENLML 138
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 298
K E + D K+ DFG C+ ++ T +Y APEV+ Y +VD W
Sbjct: 132 KLENLMLDKDGHIKITDFG-LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 299 FACTAFELATGDMLFAPKSGQGFCE 323
+E+ G + F + + E
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFE 215
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ + LG G V ++ RT ALK Q A E+E L A P
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK----XLQDCPKARREVE-LHWRASQCPH--- 116
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++R++D +++ + L +V E L G L I+ + + EI K I +
Sbjct: 117 -IVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 158 YLHRELGIIHTDLKPENILLVS 179
YLH + I H D+KPEN+L S
Sbjct: 176 YLH-SINIAHRDVKPENLLYTS 196
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA-----ALHEIEVLSAVA 90
G+Y+ LG G + V D+ T A+KI K EI++L +
Sbjct: 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL- 63
Query: 91 DGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICK 150
K VI+L+D + Q + MV+E+ + ++ K + +
Sbjct: 64 -----RHKNVIQLVDVLYNE--EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFC 116
Query: 151 YILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL+YLH + GI+H D+KP N+LL +
Sbjct: 117 QLIDGLEYLHSQ-GIVHKDIKPGNLLLTT 144
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L ++ D G A + + T Y APEV+ Y+FS D W+
Sbjct: 313 KPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 301 CTAFELATGDMLF 313
C +E+ G F
Sbjct: 373 CLLYEMIAGQSPF 385
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRL-IKYSRYKGLELNKVREICKYILTG 155
EK R + +A LC+VL + L+ I + G + I G
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 156 LDYLHRELGIIHTDLKPENILL 177
L+ LHRE I++ DLKPENILL
Sbjct: 299 LEDLHRER-IVYRDLKPENILL 319
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
Y + +G G + V +A T A KI K + EIE++ ++ +
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL------D 64
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEF-LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+IRL + F+ + + +V+E G L + + R + I K +L+
Sbjct: 65 HPNIIRLYETFE----DNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSA 118
Query: 156 LDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189
+ Y H+ L + H DLKPEN L ++ D P++
Sbjct: 119 VAYCHK-LNVAHRDLKPENFLFLT--DSPDSPLK 149
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 140 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 200 YELMTGQLPYS 210
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 137
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y + +G G F+ V LA T VA+KI + Q E+ ++ +
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL--- 71
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +++E+ G+ L+ + R K E R +
Sbjct: 72 ---NHPNIVKLFEVIE----TEKTLYLIMEYASGGEVFDYLVAHGRMKEKE---ARSKFR 121
Query: 151 YILTGLDYLHRELGIIHTDLKPENILL 177
I++ + Y H++ I+H DLK EN+LL
Sbjct: 122 QIVSAVQYCHQK-RIVHRDLKAENLLL 147
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSF-SVDMWSF 299
K E L DM K+ DFG N + Y APE+ Y VD+WS
Sbjct: 141 KAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 200
Query: 300 ACTAFELATGDMLFAPKSGQGFCE 323
+ L +G + P GQ E
Sbjct: 201 GVILYTLVSGSL---PFDGQNLKE 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
+G G FS+V + T A+KI A + L ++ + ++ L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 104 IDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKV-REICKYILTGLDYLH 160
++ + G L MV EF+ D ++K + + V + IL L Y H
Sbjct: 92 LETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 161 RELGIIHTDLKPENILLVSTIDPSKDPIRSG 191
+ IIH D+KPEN+LL S + + P++ G
Sbjct: 148 -DNNIIHRDVKPENVLLASKENSA--PVKLG 175
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 256 KVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
K+ DFG A + + + T + APEV+ R Y VD+W F L +G +
Sbjct: 173 KLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
Query: 313 F 313
F
Sbjct: 233 F 233
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
++++ LG G V + RT ALK+ + + Q H + A G P
Sbjct: 32 LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ-----ASGGPH--- 83
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++ ++D +++ + L +++E + G L I+ + + EI + I T +
Sbjct: 84 -IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 158 YLHRELGIIHTDLKPENILLVS 179
+LH I H D+KPEN+L S
Sbjct: 143 FLHSH-NIAHRDVKPENLLYTS 163
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
KPE L D K+ DFG A + T Y APEV+ Y S DMWS
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 299 FACTAFELATGDMLFAPKSGQGF 321
+ L G F +GQ
Sbjct: 215 LGVIMYILLCGFPPFYSNTGQAI 237
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y +PE + YS D+WS
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 302 TAFELATGDMLFAPKSGQ 319
+ E+A G P +
Sbjct: 192 SLVEMAVGRYPIPPPDAK 209
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
Y + +G G + V +A T A KI K + EIE++ ++ +
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL------D 81
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEF-LGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+IRL + F+ + + +V+E G L + + R + I K +L+
Sbjct: 82 HPNIIRLYETFE----DNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSA 135
Query: 156 LDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189
+ Y H+ L + H DLKPEN L ++ D P++
Sbjct: 136 VAYCHK-LNVAHRDLKPENFLFLT--DSPDSPLK 166
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y +PE + YS D+WS
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 302 TAFELATGDMLFAPKSGQ 319
+ E+A G P +
Sbjct: 192 SLVEMAVGRYPIPPPDAK 209
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102
+LG GQ VW+ Y + VA+K K + A L E ++ + + ++R
Sbjct: 20 RLGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVR 72
Query: 103 LIDHFKHAGPNGQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L +A + + ++ E++ + SL+ +K L +NK+ ++ I G+ ++
Sbjct: 73 L-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 162 ELGIIHTDLKPENILLVSTI 181
E IH DL+ NIL+ T+
Sbjct: 127 ERNYIHRDLRAANILVSDTL 146
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y +PE + YS D+WS
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 302 TAFELATGDMLFAPKSGQ 319
+ E+A G P +
Sbjct: 192 SLVEMAVGRYPIPPPDAK 209
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y +PE + YS D+WS
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 302 TAFELATGDMLFAPKSGQ 319
+ E+A G P +
Sbjct: 192 SLVEMAVGRYPIPPPDAK 209
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y +PE + YS D+WS
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 210
Query: 302 TAFELATGDMLFAPKSG 318
+ E+A G SG
Sbjct: 211 SLVEMAVGRYPIGSGSG 227
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNS 159
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
G Y + +G G F+ V LA T VA+KI Q ++L ++ V
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII-DKTQLNSSSLQKL--FREVRIXKVL 70
Query: 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYIL 153
N +++L + + + L +V E+ G+ L+ + R K E R + I+
Sbjct: 71 NHPNIVKLFEVIE----TEKTLYLVXEYASGGEVFDYLVAHGRXKEKE---ARAKFRQIV 123
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ + Y H++ I+H DLK EN+LL
Sbjct: 124 SAVQYCHQKF-IVHRDLKAENLLL 146
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSF-SVDMWSF 299
K E L D K+ DFG N + Y APE+ Y VD+WS
Sbjct: 140 KAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 300 ACTAFELATGDMLFAPKSGQGFCE 323
+ L +G + P GQ E
Sbjct: 200 GVILYTLVSGSL---PFDGQNLKE 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V A + S Y A+K + + L E+ +L+++ N + V+R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL------NHQYVVRY 67
Query: 104 ----IDHFKHAGP-----NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT 154
++ P L + +E+ + L + +S + ++ + + IL
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 155 GLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186
L Y+H + GIIH DLKP NI ID S++
Sbjct: 128 ALSYIHSQ-GIIHRDLKPMNIF----IDESRN 154
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
++++ LG G V + RT ALK+ + + Q H + A G P
Sbjct: 13 LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ-----ASGGPH--- 64
Query: 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
++ ++D +++ + L +++E + G L I+ + + EI + I T +
Sbjct: 65 -IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 158 YLHRELGIIHTDLKPENILLVS 179
+LH I H D+KPEN+L S
Sbjct: 124 FLHSH-NIAHRDVKPENLLYTS 144
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 243 KPERCL---DGIDMRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
KPE L D K+ DFG A + T Y APEV+ Y S DMWS
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 299 FACTAFELATGDMLFAPKSGQGF 321
+ L G F +GQ
Sbjct: 196 LGVIMYILLCGFPPFYSNTGQAI 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y + +G G F+ V LA T VA+KI + Q E+ ++ +
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL--- 68
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +++E+ G+ L+ + R K E R +
Sbjct: 69 ---NHPNIVKLFEVIE----TEKTLYLIMEYASGGEVFDYLVAHGRMKEKE---ARSKFR 118
Query: 151 YILTGLDYLHRELGIIHTDLKPENILL 177
I++ + Y H++ I+H DLK EN+LL
Sbjct: 119 QIVSAVQYCHQK-RIVHRDLKAENLLL 144
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 243 KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSF-SVDMWSF 299
K E L DM K+ DFG N + + Y APE+ Y VD+WS
Sbjct: 138 KAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 197
Query: 300 ACTAFELATGDMLFAPKSGQGFCE 323
+ L +G + P GQ E
Sbjct: 198 GVILYTLVSGSL---PFDGQNLKE 218
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 160 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 219
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 220 YELMTGQLPYS 230
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 121 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 157
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 168 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 228 YELMTGQLPYS 238
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 165
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
KPE L ++ D G A + + T Y APEV+ Y+FS D W+
Sbjct: 313 KPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 301 CTAFELATGDMLF 313
C +E+ G F
Sbjct: 373 CLLYEMIAGQSPF 385
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRL-IKYSRYKGLELNKVREICKYILTG 155
EK R + +A LC+VL + L+ I + G + I G
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 156 LDYLHRELGIIHTDLKPENILL 177
L+ LHRE I++ DLKPENILL
Sbjct: 299 LEDLHRER-IVYRDLKPENILL 319
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V A + S Y A+K + + L E+ +L+++ N + V+R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL------NHQYVVRY 67
Query: 104 ----IDHFKHAGP-----NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT 154
++ P L + +E+ + L + +S + ++ + + IL
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 155 GLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186
L Y+H + GIIH DLKP NI ID S++
Sbjct: 128 ALSYIHSQ-GIIHRDLKPMNIF----IDESRN 154
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFI 333
+ T Y +PE I GY+F D+WS C +E+A F + + C +
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP 256
Query: 334 CFFVDPLQHDIRDVINSCM 352
D ++R ++N C+
Sbjct: 257 PLPSDHYSEELRQLVNMCI 275
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 41 QRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQA---ALHEIEVLSAVADGDPSN 96
++K+G GQFS V+ A VALK +Q A+A + EI++L + N
Sbjct: 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL------N 90
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDS--LLRLIKYSRYKGLELNKVREICKYIL- 153
VI+ F L +VLE L D+ L R+IK+ + K L R + KY +
Sbjct: 91 HPNVIKYYASFI----EDNELNIVLE-LADAGDLSRMIKHFK-KQKRLIPERTVWKYFVQ 144
Query: 154 --TGLDYLHRELGIIHTDLKPENILLVST 180
+ L+++H ++H D+KP N+ + +T
Sbjct: 145 LCSALEHMHSR-RVMHRDIKPANVFITAT 172
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 117 LCMVLEFLGDSLLRLIKYSRYKGLELNK--VREICKYILTGLDYLHRELGIIHTDLKPEN 174
+CM E + SL + K KG + + + +I I+ L++LH +L +IH D+KP N
Sbjct: 127 ICM--ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 184
Query: 175 ILL 177
+L+
Sbjct: 185 VLI 187
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT--RQYRAPEVIL----RAGYSFSVDM 296
KP L + K+ DFG + A+ I + Y APE I + GYS D+
Sbjct: 181 KPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDI 240
Query: 297 WSFACTAFELA 307
WS T ELA
Sbjct: 241 WSLGITMIELA 251
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y +PE + YS D+WS
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 218
Query: 302 TAFELATGDMLFAPKSGQ 319
+ E+A G P +
Sbjct: 219 SLVEMAVGRYPIPPPDAK 236
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNS 167
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 301
KP L K+ DFG + + A + TR Y +PE + YS D+WS
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 253
Query: 302 TAFELATGDMLFAPKSGQ 319
+ E+A G P +
Sbjct: 254 SLVEMAVGRYPIPPPDAK 271
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
++ GL YL + I+H D+KP NIL+ S
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNS 202
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 125 GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G SL + S K E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 103 GSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFL 153
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILRAG---YSFSVDMWSFACTA 303
D K+ DFG A ++ QF + + + APEVI YSF D+++F
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 216 YELMTGQLPYS 226
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 77 QAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYS- 135
Q A+ E ++L+ V R I +A LC+V+ + +R Y+
Sbjct: 230 QGAMVEKKILAKVHS----------RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 136 --RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G + + I++GL++LH+ II+ DLKPEN+LL
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLL 322
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYR------APEVILRAGYSFSVDM 296
KPE L D ++ D G A A + +T+ Y APE++L Y FSVD
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELK---AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 297 WSFACTAFEL 306
++ T +E+
Sbjct: 373 FALGVTLYEM 382
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 145 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 205 YELMTGQLPYS 215
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 142
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 77 QAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYS- 135
Q A+ E ++L+ V R I +A LC+V+ + +R Y+
Sbjct: 230 QGAMVEKKILAKVHS----------RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 136 --RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G + + I++GL++LH+ II+ DLKPEN+LL
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLL 322
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYR------APEVILRAGYSFSVDM 296
KPE L D ++ D G A A + +T+ Y APE++L Y FSVD
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELK---AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 297 WSFACTAFEL 306
++ T +E+
Sbjct: 373 FALGVTLYEM 382
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 77 QAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYS- 135
Q A+ E ++L+ V R I +A LC+V+ + +R Y+
Sbjct: 230 QGAMVEKKILAKVHS----------RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 136 --RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G + + I++GL++LH+ II+ DLKPEN+LL
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLL 322
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYR------APEVILRAGYSFSVDM 296
KPE L D ++ D G A A + +T+ Y APE++L Y FSVD
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELK---AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 297 WSFACTAFEL 306
++ T +E+
Sbjct: 373 FALGVTLYEM 382
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 125 GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G SL + S K E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 103 GSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFL 153
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILRAG---YSFSVDMWSFACTA 303
D K+ DFG A ++ QF + + + APEVI YSF D+++F
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 216 YELMTGQLPYS 226
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 142 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 201
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 202 YELMTGQLPYS 212
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 103 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 139
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 200 YELMTGQLPYS 210
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 137
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 77 QAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYS- 135
Q A+ E ++L+ V R I +A LC+V+ + +R Y+
Sbjct: 230 QGAMVEKKILAKVHS----------RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 136 --RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G + + I++GL++LH+ II+ DLKPEN+LL
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLL 322
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYR------APEVILRAGYSFSVDM 296
KPE L D ++ D G A A + +T+ Y APE++L Y FSVD
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELK---AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 297 WSFACTAFEL 306
++ T +E+
Sbjct: 373 FALGVTLYEM 382
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 125 GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G SL + S K E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 91 GSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFL 141
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILRAG---YSFSVDMWSFACTA 303
D K+ DFG A ++ QF + + + APEVI YSF D+++F
Sbjct: 144 DNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 203
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 204 YELMTGQLPYS 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 145 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 205 YELMTGQLPYS 215
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 142
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 200 YELMTGQLPYS 210
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 137
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 117 LCMVLEFLGDSLLRLIKYSRYKGLELNK--VREICKYILTGLDYLHRELGIIHTDLKPEN 174
+CM E + SL + K KG + + + +I I+ L++LH +L +IH D+KP N
Sbjct: 83 ICM--ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 140
Query: 175 ILL 177
+L+
Sbjct: 141 VLI 143
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT--RQYRAPEVIL----RAGYSFSVDM 296
KP L + K+ DFG + A++I + Y APE I + GYS D+
Sbjct: 137 KPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDI 196
Query: 297 WSFACTAFELA 307
WS T ELA
Sbjct: 197 WSLGITMIELA 207
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAE--EIQTRQYRAPEVI----LRAGYSFSVDM 296
KP L K+ DFG + + A+ + R Y APE I R GY D+
Sbjct: 153 KPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDV 212
Query: 297 WSFACTAFELATG 309
WS T +ELATG
Sbjct: 213 WSLGITLYELATG 225
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 117 LCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI----LTGLDYLHRELGIIHTDLKP 172
+CM E + S + KY Y L+ EI I + L++L L IIH D+KP
Sbjct: 98 ICM--ELMSTSFDKFYKYV-YSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKP 154
Query: 173 ENILL 177
NILL
Sbjct: 155 SNILL 159
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVAD------ 91
R L G+F+ + L + Y K +KS + F ++ +I + S D
Sbjct: 37 RTLNQGKFNKIILC-EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ 95
Query: 92 --GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKY-----SRYK-GLEL 142
D NE C+ + N + ++ E++ DS+L+ +Y Y + +
Sbjct: 96 IITDIKNEYCLT-----CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 143 NKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ I K +L Y+H E I H D+KP NIL+
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHE-I 83
H V G N Y RKLG G++S V+ A + + VA+KI K + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+L+
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVLI 164
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP L D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLS 87
+V D G +++ +K+G G F +++LA+ T A + K Q E++
Sbjct: 29 KVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQ 88
Query: 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLC---------MVLEFLGDSLLRLIKYSRYK 138
VA D + + +D+ G L MV+E LG + L K S
Sbjct: 89 RVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLG---IDLQKISGQN 145
Query: 139 G-LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G + + V ++ +L L+Y+H E +H D+K N+LL
Sbjct: 146 GTFKKSTVLQLGIRMLDVLEYIH-ENEYVHGDIKAANLLL 184
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 248 LDGIDMRCKVVDFGNA--CRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFACTAF 304
LDG K+ DFG A ++ FA+E + T Y +PE + R Y+ D+WS C +
Sbjct: 149 LDG-KQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 305 EL 306
EL
Sbjct: 208 EL 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 168 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 228 YELMTGQLPYS 238
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 165
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLA-YDT---RTSSYVALK-IQKSAAQFAQAALHEIEVLSAVAD 91
+YI+Q LG G F V L YD T + VA+K +Q S + EI++L A+
Sbjct: 14 KYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH- 70
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
S+ R + + GP Q L +V+E+L LR L+ +++
Sbjct: 71 ---SDFIVKYRGVSY----GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 123
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
I G++YL +H DL NIL+ S
Sbjct: 124 ICKGMEYLGSRR-CVHRDLAARNILVES 150
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 252 DMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTA 303
D+ K+ DFG A ++ QF + + + APEVI + YSF D+++F
Sbjct: 167 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 226
Query: 304 FELATGDMLFA 314
+EL TG + ++
Sbjct: 227 YELMTGQLPYS 237
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 140 LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
E+ K+ +I + G+DYLH + IIH DLK NI L
Sbjct: 128 FEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFL 164
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 116 HLCMVLEFL-GDSLLRLIKYSRYK-GLELNKVREICKYILTGLDYLHRE--LGIIHTDLK 171
+LC+V+EF G L R++ R + +N +I + G++YLH E + IIH DLK
Sbjct: 80 NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIAR----GMNYLHDEAIVPIIHRDLK 135
Query: 172 PENILLVSTID 182
NIL++ ++
Sbjct: 136 SSNILILQKVE 146
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 256 KVVDFGNA---CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
K+ DFG A R K A + APEVI + +S D+WS+ +EL TG++
Sbjct: 156 KITDFGLAREWHRTTKMSAA--GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
Query: 313 F 313
F
Sbjct: 214 F 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLA-YDT---RTSSYVALK-IQKSAAQFAQAALHEIEVLSAVAD 91
+YI+Q LG G F V L YD T + VA+K +Q S + EI++L A+
Sbjct: 13 KYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH- 69
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
S+ R + + GP Q L +V+E+L LR L+ +++
Sbjct: 70 ---SDFIVKYRGVSY----GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 122
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
I G++YL +H DL NIL+ S
Sbjct: 123 ICKGMEYLGSRR-CVHRDLAARNILVES 149
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G +S+ T+ A+KI + + EIE+L + G N
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEIL--LRYGQHPN- 77
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
+I L D + +G+++ +V E + L L K R K + + I ++
Sbjct: 78 --IITLKDVYD----DGKYVYVVTELMKGGEL-LDKILRQKFFSEREASAVLFTITKTVE 130
Query: 158 YLHRELGIIHTDLKPENILLVSTIDPSKDP 187
YLH + G++H DLKP NIL V D S +P
Sbjct: 131 YLHAQ-GVVHRDLKPSNILYV---DESGNP 156
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 256 KVVDFGNA--CRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
++ DFG A RA N T + APEV+ R GY + D+WS + + TG
Sbjct: 160 RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
Query: 313 FA 314
FA
Sbjct: 220 FA 221
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLA-YDT---RTSSYVALK-IQKSAAQFAQAALHEIEVLSAVAD 91
+YI+Q LG G F V L YD T + VA+K +Q S + EI++L A+
Sbjct: 26 KYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH- 82
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
S+ R + + GP Q L +V+E+L LR L+ +++
Sbjct: 83 ---SDFIVKYRGVSY----GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 135
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
I G++YL +H DL NIL+ S
Sbjct: 136 ICKGMEYLGSRR-CVHRDLAARNILVES 162
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADG 92
G Y + +G G F+ V LA T VA+KI + + Q E+ ++ +
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL--- 63
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICK 150
N +++L + + + L +V+E+ G+ L+ + K E R +
Sbjct: 64 ---NHPNIVKLFEVIE----TEKTLYLVMEYASGGEVFDYLVAHGWMKEKE---ARAKFR 113
Query: 151 YILTGLDYLHRELGIIHTDLKPENILL 177
I++ + Y H++ I+H DLK EN+LL
Sbjct: 114 QIVSAVQYCHQKF-IVHRDLKAENLLL 139
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSF-SVDMW 297
K E L DM K+ DFG + F ++ T Y APE+ Y VD+W
Sbjct: 133 KAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 190
Query: 298 SFACTAFELATGDMLFAPKSGQGFCE 323
S + L +G + P GQ E
Sbjct: 191 SLGVILYTLVSGSL---PFDGQNLKE 213
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+I+LID K P + +V E++ ++ + + Y+ L +R +L LDY
Sbjct: 95 IIKLIDTVK--DPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYC 148
Query: 160 HRELGIIHTDLKPENILL 177
H + GI+H D+KP N+++
Sbjct: 149 HSK-GIMHRDVKPHNVMI 165
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 159 KPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 218
Query: 299 FAC 301
C
Sbjct: 219 LGC 221
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V LA + T VA+KI K A + EI + + N + V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------NHENVV 67
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 68 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 122 G-IGITHRDIKPENLLL 137
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V LA + T VA+KI K A + EI + + N + V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------NHENVV 67
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 68 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 122 G-IGITHRDIKPENLLL 137
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF----AQAALHEIEVLSAVADGDPSNE 97
R LG G F V LA T A+K+ K + + E +LS N
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA-----RNH 83
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+ +L F+ L V+EF+ GD + + K R+ + + R I++
Sbjct: 84 PFLTQLFCCFQ----TPDRLFFVMEFVNGGDLMFHIQKSRRF---DEARARFYAAEIISA 136
Query: 156 LDYLHRELGIIHTDLKPENILL 177
L +LH + GII+ DLK +N+LL
Sbjct: 137 LMFLHDK-GIIYRDLKLDNVLL 157
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 254 RCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
CK+ DFG C+ A T Y APE++ Y +VD W+ +E+ G
Sbjct: 162 HCKLADFG-MCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Query: 310 DMLFAPKSGQGFCE 323
F ++ E
Sbjct: 221 HAPFEAENEDDLFE 234
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
+I+LID K P + +V E++ ++ + + Y+ L +R +L LDY
Sbjct: 100 IIKLIDTVK--DPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYC 153
Query: 160 HRELGIIHTDLKPENILL 177
H + GI+H D+KP N+++
Sbjct: 154 HSK-GIMHRDVKPHNVMI 170
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 164 KPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 223
Query: 299 FAC 301
C
Sbjct: 224 LGC 226
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V LA + T VA+KI K A + EI + + N + V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------NHENVV 68
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 69 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 123 G-IGITHRDIKPENLLL 138
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 256 KVVDFGNACRAN-------KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
K+ DFG C+ N K F T Y APE+I Y SVD W+F +E+
Sbjct: 161 KIADFG-MCKENIWDGVTTKXFC---GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216
Query: 309 GDMLFAPKSGQGFCEDEV 326
G AP G+ EDE+
Sbjct: 217 GQ---APFEGED--EDEL 229
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 95 SNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYIL 153
+N V++L +A + ++L MV+E++ G L+ L+ S Y E R ++
Sbjct: 131 ANSPWVVQLF----YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPE-KWARFYTAEVV 183
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
LD +H +G IH D+KP+N+LL
Sbjct: 184 LALDAIH-SMGFIHRDVKPDNMLL 206
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 235 SMGGIELP-KPERCLDGIDMRCKVVDFGNACRANKQFA----EEIQTRQYRAPEVILRAG 289
SMG I KP+ L K+ DFG + NK+ + T Y +PEV+ G
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 290 ----YSFSVDMWSFACTAFELATGDMLFAPKSGQG 320
Y D WS +E+ GD F S G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG 285
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 298
KPE L D +VDFG A Q + T Y APE + ++ D+++
Sbjct: 161 KPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYA 220
Query: 299 FACTAFELATG 309
C +E TG
Sbjct: 221 LTCVLYECLTG 231
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Query: 256 KVVDFGNACRAN-------KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
K+ DFG C+ N K F T Y APE+I Y SVD W+F +E+
Sbjct: 482 KIADFG-MCKENIWDGVTTKXFC---GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 537
Query: 309 GDMLFAPKSGQGFCEDEV 326
G F +G EDE+
Sbjct: 538 GQAPF-----EGEDEDEL 550
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQ---AALHEIEVLSAVADGDP 94
Y + +G G F V L T A+K+ + A E + A A
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---- 131
Query: 95 SNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYIL 153
N V++L +A + ++L MV+E++ G L+ L+ S Y E R ++
Sbjct: 132 -NSPWVVQLF----YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPE-KWARFYTAEVV 183
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
LD +H +G IH D+KP+N+LL
Sbjct: 184 LALDAIH-SMGFIHRDVKPDNMLL 206
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 235 SMGGIELP-KPERCLDGIDMRCKVVDFGNACRANKQFA----EEIQTRQYRAPEVILRAG 289
SMG I KP+ L K+ DFG + NK+ + T Y +PEV+ G
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 290 ----YSFSVDMWSFACTAFELATGDMLFAPKSGQG 320
Y D WS +E+ GD F S G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG 285
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 25/148 (16%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALK-------IQKSAAQFAQAALHEIEVLSAVA 90
Y + +G G F V L T A+K I++S + F E ++++
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFF---WEERDIMAF-- 125
Query: 91 DGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREIC 149
+N V++L +A + ++L MV+E++ G L+ L+ S Y E R
Sbjct: 126 ----ANSPWVVQLF----YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPE-KWARFYT 174
Query: 150 KYILTGLDYLHRELGIIHTDLKPENILL 177
++ LD +H +G IH D+KP+N+LL
Sbjct: 175 AEVVLALDAIH-SMGFIHRDVKPDNMLL 201
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 235 SMGGIELP-KPERCLDGIDMRCKVVDFGNACRANKQFA----EEIQTRQYRAPEVILRAG 289
SMG I KP+ L K+ DFG + NK+ + T Y +PEV+ G
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 290 ----YSFSVDMWSFACTAFELATGDMLFAPKSGQG 320
Y D WS +E+ GD F S G
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG 280
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 299 FAC 301
C
Sbjct: 212 LGC 214
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 104 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 158
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 67 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 120
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 121 LHG-IGITHRDIKPENLLL 138
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 136 RYKGLELNKVR--EICKYILTGLDYLHRELGIIHTDLKPENILLVST 180
+ +G +L+KV E+ + I G+DY+H + +I+ DLKP NI LV T
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDT 158
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 173 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 232
Query: 299 FAC 301
C
Sbjct: 233 LGC 235
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 125 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 179
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97
Y + +G G +S+ T+ A+KI + + EIE+L + G N
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKR---DPTEEIEIL--LRYGQHPN- 77
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157
+I L D + +G+++ +V E L L K R K + + I ++
Sbjct: 78 --IITLKDVYD----DGKYVYVVTELXKGGEL-LDKILRQKFFSEREASAVLFTITKTVE 130
Query: 158 YLHRELGIIHTDLKPENILLVSTIDPSKDP 187
YLH + G++H DLKP NIL V D S +P
Sbjct: 131 YLHAQ-GVVHRDLKPSNILYV---DESGNP 156
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 256 KVVDFGNA--CRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312
++ DFG A RA N T + APEV+ R GY + D+WS + TG
Sbjct: 160 RICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
Query: 313 FA 314
FA
Sbjct: 220 FA 221
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 299 FAC 301
C
Sbjct: 212 LGC 214
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 104 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 158
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 299 FAC 301
C
Sbjct: 212 LGC 214
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 104 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 158
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 66 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 119
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 120 LHG-IGITHRDIKPENLLL 137
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 153 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 212
Query: 299 FAC 301
C
Sbjct: 213 LGC 215
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 105 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 159
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 256 KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 315
K+ DFG AC + + APEV + YS D++S+ +E+ T F
Sbjct: 146 KICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205
Query: 316 KSGQGF 321
G F
Sbjct: 206 IGGPAF 211
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 117 LCMVLEFL-GDSLLRLIKYSR-YKGLELNKVREICKYILTGLDYLH--RELGIIHTDLKP 172
+C+V+E+ G SL ++ + C G+ YLH + +IH DLKP
Sbjct: 74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 173 ENILLVS 179
N+LLV+
Sbjct: 134 PNLLLVA 140
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 299 FAC 301
C
Sbjct: 212 LGC 214
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 104 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 158
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 299 FAC 301
C
Sbjct: 212 LGC 214
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 104 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 158
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 67 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 120
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 121 LHG-IGITHRDIKPENLLL 138
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 67 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 120
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 121 LHG-IGITHRDIKPENLLL 138
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 67 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 120
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 121 LHG-IGITHRDIKPENLLL 138
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 39 IAQRKLGWGQFSIVWL--AYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
++++ LG+G V ++ R + +++ F AL EI++L+ +D P+
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQGR-----PVAVKRMLIDFCDIALMEIKLLTE-SDDHPN- 88
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVRE-----ICKY 151
VIR + + + L + LE +L L++ L +E + +
Sbjct: 89 ---VIR----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVST 180
I +G+ +LH L IIH DLKP+NIL+ ++
Sbjct: 142 IASGVAHLH-SLKIIHRDLKPQNILVSTS 169
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V A + S Y A+K + + L E+ +L+++ N + V+R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASL------NHQYVVRY 67
Query: 104 ----IDHFKHAGP-----NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT 154
++ P L + E+ + L + +S + ++ + + IL
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 155 GLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186
L Y+H + GIIH +LKP NI ID S++
Sbjct: 128 ALSYIHSQ-GIIHRNLKPXNIF----IDESRN 154
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 299 FAC 301
C
Sbjct: 212 LGC 214
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 104 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 158
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 39 IAQRKLGWGQFSIVWL--AYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
++++ LG+G V ++ R + +++ F AL EI++L+ +D P+
Sbjct: 18 VSEKILGYGSSGTVVFQGSFQGR-----PVAVKRMLIDFCDIALMEIKLLTE-SDDHPN- 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVRE-----ICKY 151
VIR + + + L + LE +L L++ L +E + +
Sbjct: 71 ---VIR----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVST 180
I +G+ +LH L IIH DLKP+NIL+ ++
Sbjct: 124 IASGVAHLH-SLKIIHRDLKPQNILVSTS 151
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 256 KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 315
K+ DFG AC + + APEV + YS D++S+ +E+ T F
Sbjct: 147 KICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 206
Query: 316 KSGQGF 321
G F
Sbjct: 207 IGGPAF 212
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 117 LCMVLEFL-GDSLLRLIKYSR-YKGLELNKVREICKYILTGLDYLH--RELGIIHTDLKP 172
+C+V+E+ G SL ++ + C G+ YLH + +IH DLKP
Sbjct: 75 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 134
Query: 173 ENILLVS 179
N+LLV+
Sbjct: 135 PNLLLVA 141
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 153 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 212
Query: 299 FAC 301
C
Sbjct: 213 LGC 215
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 105 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 159
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 39 IAQRKLGWGQFSIVWL--AYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
++++ LG+G V ++ R + +++ F AL EI++L+ +D P+
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQGR-----PVAVKRMLIDFCDIALMEIKLLTE-SDDHPN- 88
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVRE-----ICKY 151
VIR + + + L + LE +L L++ L +E + +
Sbjct: 89 ---VIR----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVST 180
I +G+ +LH L IIH DLKP+NIL+ ++
Sbjct: 142 IASGVAHLH-SLKIIHRDLKPQNILVSTS 169
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 243 KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 298
KP + ++R +++D+G A K++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 154 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 213
Query: 299 FAC 301
C
Sbjct: 214 LGC 216
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 118 CMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
++ E++ ++ +++ Y L +R +L LDY H + GI+H D+KP N+++
Sbjct: 106 SLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI 160
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + + N +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML------NHEN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 67 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 120
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 121 LHG-IGITHRDIKPENLLL 138
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 39 IAQRKLGWGQFSIVWL--AYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSN 96
++++ LG+G V ++ R + +++ F AL EI++L+ +D P+
Sbjct: 18 VSEKILGYGSSGTVVFQGSFQGR-----PVAVKRMLIDFCDIALMEIKLLTE-SDDHPN- 70
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVRE-----ICKY 151
VIR + + + L + LE +L L++ L +E + +
Sbjct: 71 ---VIR----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVST 180
I +G+ +LH L IIH DLKP+NIL+ ++
Sbjct: 124 IASGVAHLH-SLKIIHRDLKPQNILVSTS 151
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQ--KSAAQFAQAALHEIEVLSAVADG 92
G Y R++G G F +++ + + VA+K + +S A + ++L+
Sbjct: 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG- 67
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
I + + G G H +V++ LG SL L+ K + V K +
Sbjct: 68 -----------IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK-FSVKTVAMAAKQM 115
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L + +H E +++ D+KP+N L+
Sbjct: 116 LARVQSIH-EKSLVYRDIKPDNFLI 139
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 147 EICKYILTGLDYLHRELGIIHTDLKPENILL 177
+I I+ L++LH +L +IH D+KP N+L+
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLI 170
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT--RQYRAPEVIL----RAGYSFSVDM 296
KP L + K DFG + A++I + Y APE I + GYS D+
Sbjct: 164 KPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDI 223
Query: 297 WSFACTAFELA 307
WS T ELA
Sbjct: 224 WSLGITXIELA 234
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
T Y APE++ Y FSVD W+ FE+ G
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
R +G G ++ V L +T A+K+ K + ++ V + SN ++
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE-QASNHPFLV 73
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
L F+ L V+E++ GD + + R + L R I L+YL
Sbjct: 74 GLHSCFQTES----RLFFVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEISLALNYL 126
Query: 160 HRELGIIHTDLKPENILLVS 179
H E GII+ DLK +N+LL S
Sbjct: 127 H-ERGIIYRDLKLDNVLLDS 145
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQ--KSAAQFAQAALHEIEVLSAVADG 92
G Y R++G G F +++ + + VA+K + +S A + ++L+
Sbjct: 8 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG- 66
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
I + + G G H +V++ LG SL L+ K + V K +
Sbjct: 67 -----------IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK-FSVKTVAMAAKQM 114
Query: 153 LTGLDYLHRELGIIHTDLKPENILL 177
L + +H E +++ D+KP+N L+
Sbjct: 115 LARVQSIH-EKSLVYRDIKPDNFLI 138
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V LA + T VA+KI K A + EI + + N + V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHENVV 67
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 68 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 122 G-IGITHRDIKPENLLL 137
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
T Y APE++ Y FSVD W+ FE+ G
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
R +G G ++ V L +T A+K+ K + ++ V + SN ++
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE-QASNHPFLV 69
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
L F+ L V+E++ GD + + R + L R I L+YL
Sbjct: 70 GLHSCFQTES----RLFFVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEISLALNYL 122
Query: 160 HRELGIIHTDLKPENILLVS 179
H E GII+ DLK +N+LL S
Sbjct: 123 H-ERGIIYRDLKLDNVLLDS 141
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V LA + T VA+KI K A + EI + + N + V+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHENVV 66
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 67 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 120
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 121 G-IGITHRDIKPENLLL 136
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWS 298
KPE L + DFG C+ N + T +Y APEV+ + Y +VD W
Sbjct: 166 KPENILLDSQGHIVLTDFG-LCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWC 224
Query: 299 FACTAFELATG 309
+E+ G
Sbjct: 225 LGAVLYEMLYG 235
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
+G G F V LA + A+K+ + A +L + +E+ V L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKA-----------ILKKKEEKHIMSERNV--L 92
Query: 104 IDHFKHAGPNGQH--------LCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+ + KH G H L VL+++ L R + + R I +
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL-FYHLQRERCFLEPRARFYAAEIASA 151
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L YLH L I++ DLKPENILL S
Sbjct: 152 LGYLH-SLNIVYRDLKPENILLDS 174
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V LA + T VA+KI K A + EI + + N + V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHENVV 68
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 69 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 123 G-IGITHRDIKPENLLL 138
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 66 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 119
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 120 LHG-IGITHRDIKPENLLL 137
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
T Y APE++ Y FSVD W+ FE+ G
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
R +G G ++ V L +T A+++ K + ++ V + SN ++
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE-QASNHPFLV 116
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
L F+ L V+E++ L + R + L R I L+YLH
Sbjct: 117 GLHSCFQTES----RLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH- 170
Query: 162 ELGIIHTDLKPENILLVS 179
E GII+ DLK +N+LL S
Sbjct: 171 ERGIIYRDLKLDNVLLDS 188
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V LA + T VA+KI K A + EI + + N + V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHENVV 67
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 68 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 122 G-IGITHRDIKPENLLL 137
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309
T Y APE++ Y FSVD W+ FE+ G
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
R +G G ++ V L +T A+K+ K + ++ V + SN ++
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE-QASNHPFLV 84
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159
L F+ L V+E++ GD + + R + L R I L+YL
Sbjct: 85 GLHSCFQTES----RLFFVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEISLALNYL 137
Query: 160 HRELGIIHTDLKPENILLVS 179
H E GII+ DLK +N+LL S
Sbjct: 138 H-ERGIIYRDLKLDNVLLDS 156
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 66 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 119
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 120 LHG-IGITHRDIKPENLLL 137
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 34 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 90
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 91 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 136
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 137 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 169
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 163 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 222
Query: 299 FAC 301
C
Sbjct: 223 LGC 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 95 SNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYIL 153
+N V++L F+ + ++L MV+E++ G L+ L+ S Y E + ++
Sbjct: 132 ANSPWVVQLFCAFQ----DDKYLYMVMEYMPGGDLVNLM--SNYDVPE-KWAKFYTAEVV 184
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
LD +H +G+IH D+KP+N+LL
Sbjct: 185 LALDAIH-SMGLIHRDVKPDNMLL 207
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 235 SMGGIELP-KPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRAG 289
SMG I KP+ L K+ DFG + ++ + T Y +PEV+ G
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 290 ----YSFSVDMWSFACTAFELATGDMLFAPKS 317
Y D WS FE+ GD F S
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 28 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 84
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 85 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 130
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 131 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 163
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 157 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 216
Query: 299 FAC 301
C
Sbjct: 217 LGC 219
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 66 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 119
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 120 LHG-IGITHRDIKPENLLL 137
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 66
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 67 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 120
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 121 LHG-IGITHRDIKPENLLL 138
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 66 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 119
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 120 LHG-IGITHRDIKPENLLL 137
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 27 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 83
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 84 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 129
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 130 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 162
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 156 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 215
Query: 299 FAC 301
C
Sbjct: 216 LGC 218
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 28 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 84
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 85 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 130
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 131 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 163
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 157 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 216
Query: 299 FAC 301
C
Sbjct: 217 LGC 219
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G + V LA + T VA+KI K A + EI + + N + V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHENVV 67
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 68 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 122 G-IGITHRDIKPENLLL 137
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + + Y+ L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKC 99
+ LG G + V LA + T VA+KI K A + EI + + N +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHEN 65
Query: 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158
V++ H + N Q+L LE+ G L I+ G+ + ++ G+ Y
Sbjct: 66 VVKFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 119
Query: 159 LHRELGIIHTDLKPENILL 177
LH +GI H D+KPEN+LL
Sbjct: 120 LHG-IGITHRDIKPENLLL 137
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLA-YDT---RTSSYVALK-IQKSAAQFAQAALHEIEVLSAVAD 91
+YI+Q LG G F V L YD T + VA+K +Q S + EI++L A+
Sbjct: 10 KYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH- 66
Query: 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKY 151
S+ R + + GP L +V+E+L LR L+ +++
Sbjct: 67 ---SDFIVKYRGVSY----GPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 119
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
I G++YL +H DL NIL+ S
Sbjct: 120 ICKGMEYLGSR-RCVHRDLAARNILVES 146
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 39 IAQRKLGWGQF-SIVWLAYDTRTSSY-VALKIQKSAAQFA--QAALHEIEVLSAVADGDP 94
IA +LG G F S+ Y R VA+K+ K + A + + E +++ +
Sbjct: 13 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL----- 67
Query: 95 SNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT 154
+ ++RLI + + L +V+E G L + + + ++ V E+ +
Sbjct: 68 -DNPYIVRLIGVCQ-----AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 121
Query: 155 GLDYLHRELGIIHTDLKPENILLVS 179
G+ YL E +H DL N+LLV+
Sbjct: 122 GMKYLE-EKNFVHRDLAARNVLLVN 145
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEI 83
V +G+L R +R L G F+ V+ A D + ALK + + + +A + E+
Sbjct: 21 QTVELGEL----RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEV 76
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ-HLCMVLEFLGDSLLRLIKYSRYKG-LE 141
+ ++ + C I K GQ ++ E L+ +K +G L
Sbjct: 77 CFMKKLSGHPNIVQFCSAASIG--KEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLS 134
Query: 142 LNKVREICKYILTGLDYLHRELG-IIHTDLKPENILL 177
+ V +I + ++HR+ IIH DLK EN+LL
Sbjct: 135 CDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 125 GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176
G L + K + LE + V + + + LD+LH + GI H DLKPENIL
Sbjct: 96 GSILSHIHKRRHFNELEASVV---VQDVASALDFLHNK-GIAHRDLKPENIL 143
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 125 GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176
G L + K + LE + V + + + LD+LH + GI H DLKPENIL
Sbjct: 96 GSILSHIHKRRHFNELEASVV---VQDVASALDFLHNK-GIAHRDLKPENIL 143
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 18/144 (12%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPS 95
Y +G G F+ V LA T VA+KI + + EIE L +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRH---- 67
Query: 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYIL 153
+ I H + MVLE+ G+ +I R L + R + + I+
Sbjct: 68 ------QHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIV 118
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
+ + Y+H + G H DLKPEN+L
Sbjct: 119 SAVAYVHSQ-GYAHRDLKPENLLF 141
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + Q+ T+ ++ +PEV + YS D+WSF
Sbjct: 154 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 213
Query: 303 AFEL-ATGDMLFAPKSGQGFCED 324
+E+ + G + + +S ED
Sbjct: 214 MWEVFSEGKIPYENRSNSEVVED 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYV---ALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
+ K+G G F +V+ Y T+ V A + + + Q EI+V++
Sbjct: 28 VGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMA-------- 79
Query: 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYIL 153
KC + +G LC+V ++ G L RL L + +I +
Sbjct: 80 --KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 137
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
G+++LH E IH D+K NILL
Sbjct: 138 NGINFLH-ENHHIHRDIKSANILL 160
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + Q+ T+ ++ +PEV + YS D+WSF
Sbjct: 134 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 303 AFEL-ATGDMLFAPKSGQGFCED 324
+E+ + G + + +S ED
Sbjct: 194 MWEVFSEGKIPYENRSNSEVVED 216
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA--LKIQKSAAQFAQAALHEIEVLSAVADG 92
G Y +++G G S V+ + + Y + ++++ Q + +EI L+ +
Sbjct: 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 112
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+ +IRL D+ Q++ MV+E L +K + K ++ + + K +
Sbjct: 113 --QHSDKIIRLYDY----EITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNM 164
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L + +H+ GI+H+DLKP N L+V
Sbjct: 165 LEAVHTIHQH-GIVHSDLKPANFLIV 189
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYV---ALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
+ K+G G F +V+ Y T+ V A + + + Q EI+V++
Sbjct: 34 VGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMA-------- 85
Query: 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYIL 153
KC + +G LC+V ++ G L RL L + +I +
Sbjct: 86 --KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
G+++LH E IH D+K NILL
Sbjct: 144 NGINFLH-ENHHIHRDIKSANILL 166
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 145 VREICKYILTGLDYLHRELGIIHTDLKPENILLVST 180
+ I + I + L YLH + GI H D+KPEN L +
Sbjct: 170 ISNIMRQIFSALHYLHNQ-GICHRDIKPENFLFSTN 204
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + Q+ T+ ++ +PEV + YS D+WSF
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 303 AFEL-ATGDMLFAPKSGQGFCED 324
+E+ + G + + +S ED
Sbjct: 195 MWEVFSEGKIPYENRSNSEVVED 217
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYV---ALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
+ K+G G F +V+ Y T+ V A + + + Q EI+V++
Sbjct: 34 VGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMA-------- 85
Query: 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYIL 153
KC + +G LC+V ++ G L RL L + +I +
Sbjct: 86 --KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
G+++LH E IH D+K NILL
Sbjct: 144 NGINFLH-ENHHIHRDIKSANILL 166
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + Q+ T+ ++ +PEV + YS D+WSF
Sbjct: 137 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 196
Query: 303 AFEL-ATGDMLFAPKSGQGFCED 324
+E+ + G + + +S ED
Sbjct: 197 MWEVFSEGKIPYENRSNSEVVED 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 28/143 (19%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALH----EIEVLSAVADGDPSNE 97
R LG G+F V+LA + ++ VALK+ + + H EIE+ + + +
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN---- 84
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN------KVREICKY 151
++RL ++F + + + ++LE+ L YK L+ + + I +
Sbjct: 85 --ILRLYNYFY----DRRRIYLILEYAPRGEL-------YKELQKSCTFDEQRTATIMEE 131
Query: 152 ILTGLDYLHRELGIIHTDLKPEN 174
+ L Y H + +IH D+KPEN
Sbjct: 132 LADALMYCHGK-KVIHRDIKPEN 153
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 301
KPE L G+ K+ DFG + A + + T Y PE+I ++ VD+W
Sbjct: 150 KPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGV 209
Query: 302 TAFELATGDMLFAPKS 317
+EL G+ F S
Sbjct: 210 LCYELLVGNPPFESAS 225
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 248 LDGIDMRCKVVDFGNA--CRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFACTAF 304
LDG K+ DFG A + FA+ + T Y +PE + R Y+ D+WS C +
Sbjct: 149 LDG-KQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 305 EL 306
EL
Sbjct: 208 EL 209
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + Q+ T+ ++ +PEV + YS D+WSF
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 191
Query: 303 AFEL-ATGDMLFAPKSGQGFCED 324
+E+ + G + + +S ED
Sbjct: 192 MWEVFSEGKIPYENRSNSEVVED 214
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + Q+ T+ ++ +PEV + YS D+WSF
Sbjct: 134 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 303 AFEL-ATGDMLFAPKSGQGFCED 324
+E+ + G + + +S ED
Sbjct: 194 MWEVFSEGKIPYENRSNSEVVED 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 256 KVVDFGNACRANKQFAEEIQTRQ------YRAPEVILRAGYSFSVDMWSFACTAFELATG 309
K+ DFG C+ + + + TR+ Y APE+I Y SVD W++ +E+ G
Sbjct: 160 KIADFG-MCK--EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 216
Query: 310 DMLF 313
F
Sbjct: 217 QPPF 220
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 23/144 (15%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
LG G F V LA T A+KI K + + +V + EK V+ L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKK-----DVVIQDDDVECTMV------EKRVLAL 75
Query: 104 ID------HFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTG 155
+D L V+E++ GD + + + ++K E V + I G
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFK--EPQAVFYAAE-ISIG 132
Query: 156 LDYLHRELGIIHTDLKPENILLVS 179
L +LH+ GII+ DLK +N++L S
Sbjct: 133 LFFLHKR-GIIYRDLKLDNVMLDS 155
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA--LKIQKSAAQFAQAALHEIEVLSAVADG 92
G Y +++G G S V+ + + Y + ++++ Q + +EI L+ +
Sbjct: 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 112
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+ +IRL D+ Q++ MV+E L +K + K ++ + + K +
Sbjct: 113 --QHSDKIIRLYDY----EITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNM 164
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L + +H+ GI+H+DLKP N L+V
Sbjct: 165 LEAVHTIHQH-GIVHSDLKPANFLIV 189
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 119 MVLEFLGDSLLRLIKYSR-----YKGLELNK--VREICKYILTGLDYLHRELGIIHTDLK 171
++ ++ L +IK+ R K ++L + V+ + IL G+ YLH ++H DLK
Sbjct: 97 LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLK 155
Query: 172 PENILLV 178
P NIL++
Sbjct: 156 PANILVM 162
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 39 IAQRKLGWGQF-SIVWLAYDTRTSSY-VALKIQKSAAQFA--QAALHEIEVLSAVADGDP 94
IA +LG G F S+ Y R VA+K+ K + A + + E +++ +
Sbjct: 339 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL----- 393
Query: 95 SNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT 154
+ ++RLI + + L +V+E G L + + + ++ V E+ +
Sbjct: 394 -DNPYIVRLIGVCQ-----AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 447
Query: 155 GLDYLHRELGIIHTDLKPENILLVS 179
G+ YL E +H +L N+LLV+
Sbjct: 448 GMKYLE-EKNFVHRNLAARNVLLVN 471
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 248 LDGIDMRCKVVDFGNA--CRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFACTAF 304
LDG K+ DFG A + FA+ + T Y +PE + R Y+ D+WS C +
Sbjct: 149 LDG-KQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 305 EL 306
EL
Sbjct: 208 EL 209
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA--LKIQKSAAQFAQAALHEIEVLSAVADG 92
G Y +++G G S V+ + + Y + ++++ Q + +EI L+ +
Sbjct: 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 112
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+ +IRL D+ Q++ MV+E L +K + K ++ + + K +
Sbjct: 113 --QHSDKIIRLYDY----EITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNM 164
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L + +H+ GI+H+DLKP N L+V
Sbjct: 165 LEAVHTIHQH-GIVHSDLKPANFLIV 189
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA--LKIQKSAAQFAQAALHEIEVLSAVADG 92
G Y +++G G S V+ + + Y + ++++ Q + +EI L+ +
Sbjct: 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 84
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+ +IRL D+ Q++ MV+E L +K + K ++ + + K +
Sbjct: 85 --QHSDKIIRLYDY----EITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNM 136
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L + +H+ GI+H+DLKP N L+V
Sbjct: 137 LEAVHTIHQH-GIVHSDLKPANFLIV 161
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA--LKIQKSAAQFAQAALHEIEVLSAVADG 92
G Y +++G G S V+ + + Y + ++++ Q + +EI L+ +
Sbjct: 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 84
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+ +IRL D+ Q++ MV+E L +K + K ++ + + K +
Sbjct: 85 --QHSDKIIRLYDY----EITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNM 136
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L + +H+ GI+H+DLKP N L+V
Sbjct: 137 LEAVHTIHQH-GIVHSDLKPANFLIV 161
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 243 KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 298
KP + D + +++D+G A +++ + +R ++ PE+++ Y +S+DMWS
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 299 FAC 301
C
Sbjct: 218 LGC 220
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYD-TRTSSYVALKIQKSAAQFAQAALHEI 83
H V G N Y RKLG G++S V+ A + T V ++ + + + +
Sbjct: 29 HVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 85
Query: 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELN 143
E L G P+ +I L D K P + +V E + ++ + ++ + L
Sbjct: 86 ENLR----GGPN----IITLADIVK--DPVSRTPALVFEHVNNTDFKQLR----QTLTDY 131
Query: 144 KVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+R IL LDY H +GI+H D+KP N+++
Sbjct: 132 DIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQA---ALHEIEVLSAVADGD 93
+ R +G G F V+ T A+K + K + Q AL+E +LS V+ GD
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
C + + P+ + L GD L ++ + ++ R I+
Sbjct: 251 -----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM---RFYAAEII 302
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
GL+++H +++ DLKP NILL
Sbjct: 303 LGLEHMHNRF-VVYRDLKPANILL 325
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQA---ALHEIEVLSAVADGD 93
+ R +G G F V+ T A+K + K + Q AL+E +LS V+ GD
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
C + + P+ + L GD L ++ + ++ R I+
Sbjct: 250 -----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM---RFYAAEII 301
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
GL+++H +++ DLKP NILL
Sbjct: 302 LGLEHMHNRF-VVYRDLKPANILL 324
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQA---ALHEIEVLSAVADGD 93
+ R +G G F V+ T A+K + K + Q AL+E +LS V+ GD
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
C + + P+ + L GD L ++ + ++ R I+
Sbjct: 251 -----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM---RFYAAEII 302
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
GL+++H +++ DLKP NILL
Sbjct: 303 LGLEHMHNRF-VVYRDLKPANILL 325
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQA---ALHEIEVLSAVADGD 93
+ R +G G F V+ T A+K + K + Q AL+E +LS V+ GD
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYIL 153
C + + P+ + L GD L ++ + ++ R I+
Sbjct: 251 -----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM---RFYAAEII 302
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
GL+++H +++ DLKP NILL
Sbjct: 303 LGLEHMHNRF-VVYRDLKPANILL 325
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 65 ALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI-----RLIDHFKHAGPNGQHLCM 119
+K++ + +A L++ E+L E+ V+ + I +A + HL +
Sbjct: 108 VVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYL 167
Query: 120 VLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
V+++ GD L L K+ L + R ++ +D +H +L +H D+KP+N+LL
Sbjct: 168 VMDYYVGGDLLTLLSKFE--DKLPEDMARFYIGEMVLAIDSIH-QLHYVHRDIKPDNVLL 224
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVI--LRAG---YSFS 293
KP+ L ++ ++ DFG+ + N Q + + T Y +PE++ + G Y
Sbjct: 218 KPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE 277
Query: 294 VDMWSFACTAFELATGDMLFAPKS 317
D WS +E+ G+ F +S
Sbjct: 278 CDWWSLGVCMYEMLYGETPFYAES 301
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA--LKIQKSAAQFAQAALHEIEVLSAVADG 92
G Y +++G G S V+ + + Y + ++++ Q + +EI L+ +
Sbjct: 11 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 68
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+ +IRL D+ Q++ MV+E L +K + K ++ + + K +
Sbjct: 69 --QHSDKIIRLYDY----EITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNM 120
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L + +H+ GI+H+DLKP N L+V
Sbjct: 121 LEAVHTIHQH-GIVHSDLKPANFLIV 145
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEK 98
+ Q +L F I+ + +K++ + FA L++ E+L E+
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 99 CVI-----RLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKY 151
V+ + I +A + +L +V+++ GD L L K+ E+ R
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM--ARFYLAE 183
Query: 152 ILTGLDYLHRELGIIHTDLKPENILL 177
++ +D +H +L +H D+KP+NIL+
Sbjct: 184 MVIAIDSVH-QLHYVHRDIKPDNILM 208
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 26/141 (18%)
Query: 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLS-----AVADGDPS-- 95
K+G G FS V+LA T+ +K A + H I + + VA G +
Sbjct: 28 KIGEGTFSSVYLA----TAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVM 83
Query: 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTG 155
K R DH A P +H +S L ++ L +VRE +
Sbjct: 84 GVKYCFRKNDHVVIAMPYLEH---------ESFLDILN-----SLSFQEVREYMLNLFKA 129
Query: 156 LDYLHRELGIIHTDLKPENIL 176
L +H + GI+H D+KP N L
Sbjct: 130 LKRIH-QFGIVHRDVKPSNFL 149
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 65 ALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI-----RLIDHFKHAGPNGQHLCM 119
+K++ + +A L++ E+L E+ V+ + I +A + HL +
Sbjct: 92 VVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYL 151
Query: 120 VLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
V+++ GD L L K+ L + R ++ +D +H +L +H D+KP+N+LL
Sbjct: 152 VMDYYVGGDLLTLLSKFE--DKLPEDMARFYIGEMVLAIDSIH-QLHYVHRDIKPDNVLL 208
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVI--LRAG---YSFS 293
KP+ L ++ ++ DFG+ + N Q + + T Y +PE++ + G Y
Sbjct: 202 KPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE 261
Query: 294 VDMWSFACTAFELATGDMLFAPKS 317
D WS +E+ G+ F +S
Sbjct: 262 CDWWSLGVCMYEMLYGETPFYAES 285
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA--LKIQKSAAQFAQAALHEIEVLSAVADG 92
G Y +++G G S V+ + + Y + ++++ Q + +EI L+ +
Sbjct: 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 65
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+ +IRL D+ Q++ MV+E L +K + K ++ + + K +
Sbjct: 66 --QHSDKIIRLYDY----EITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNM 117
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L + +H+ GI+H+DLKP N L+V
Sbjct: 118 LEAVHTIHQH-GIVHSDLKPANFLIV 142
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 146 LVGENLVCKVADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 301 CTAFELAT 308
EL T
Sbjct: 203 ILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 146 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 301 CTAFELAT 308
EL T
Sbjct: 203 ILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 136 LVGENLVCKVADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 192
Query: 301 CTAFELAT 308
EL T
Sbjct: 193 ILLTELTT 200
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVSTI 181
IL + + H ++G++H DLKPEN+LL S +
Sbjct: 130 ILEAVLHCH-QMGVVHRDLKPENLLLASKL 158
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVA--LKIQKSAAQFAQAALHEIEVLSAVADG 92
G Y +++G G S V+ + + Y + ++++ Q + +EI L+ +
Sbjct: 7 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 64
Query: 93 DPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYI 152
+ +IRL D+ Q++ MV+E L +K + K ++ + + K +
Sbjct: 65 --QHSDKIIRLYDY----EITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNM 116
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L + +H+ GI+H+DLKP N L+V
Sbjct: 117 LEAVHTIHQH-GIVHSDLKPANFLIV 141
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 146 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 301 CTAFELAT 308
EL T
Sbjct: 203 ILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 146 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 301 CTAFELAT 308
EL T
Sbjct: 203 ILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 146 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 301 CTAFELAT 308
EL T
Sbjct: 203 ILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 135 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 191
Query: 301 CTAFELAT 308
EL T
Sbjct: 192 ILLTELTT 199
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 312 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 301 CTAFELAT 308
EL T
Sbjct: 369 ILLTELTT 376
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 137 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 301 CTAFELAT 308
EL T
Sbjct: 194 ILLTELTT 201
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 143 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 301 CTAFELAT 308
EL T
Sbjct: 200 ILLTELTT 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 146 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 301 CTAFELAT 308
EL T
Sbjct: 203 ILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 139 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 195
Query: 301 CTAFELAT 308
EL T
Sbjct: 196 ILLTELTT 203
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 312 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 301 CTAFELAT 308
EL T
Sbjct: 369 ILLTELTT 376
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 146 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 301 CTAFELAT 308
EL T
Sbjct: 203 ILLTELTT 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKI--QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
LG G V LA + T VA+KI K A + EI + + N + V+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------NHENVV 67
Query: 102 RLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH 160
+ H + N Q+L LE+ G L I+ G+ + ++ G+ YLH
Sbjct: 68 KFYGHRREG--NIQYL--FLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 161 RELGIIHTDLKPENILL 177
+GI H D+KPEN+LL
Sbjct: 122 G-IGITHRDIKPENLLL 137
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 146 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 301 CTAFELAT 308
EL T
Sbjct: 203 ILLTELTT 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 312 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 301 CTAFELAT 308
EL T
Sbjct: 369 ILLTELTT 376
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 247 CLDGIDMRCKVVDFGNACRA-NKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL D+ KV DFG + Q+ + T+ ++ APEV YS D+W+F
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGIL 194
Query: 303 AFEL 306
+E+
Sbjct: 195 MWEV 198
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Query: 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVI 101
++LG GQF +V L + VA+K+ K + E + + + S+ K V
Sbjct: 14 KELGSGQFGVVKLG-KWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-----SHPKLV- 66
Query: 102 RLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161
F + +V E++ + L S KGLE +++ E+C + G+ +L
Sbjct: 67 ----KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 162 ELGIIHTDLKPENILL 177
IH DL N L+
Sbjct: 123 H-QFIHRDLAARNCLV 137
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILL 177
I+ L YL + G+IH D+KP NILL
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILL 158
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT--RQYRAPEVI-----LRAGYSFSVD 295
KP L + K+ DFG + R A++ Y APE I + Y D
Sbjct: 152 KPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRAD 211
Query: 296 MWSFACTAFELATGDMLF 313
+WS + ELATG +
Sbjct: 212 VWSLGISLVELATGQFPY 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
IL + + H ++G++H DLKPEN+LL S
Sbjct: 112 ILEAVLHCH-QMGVVHRDLKPENLLLAS 138
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 395 LVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451
Query: 301 CTAFELAT 308
EL T
Sbjct: 452 ILLTELTT 459
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG A E RQ + APE L ++ D+WSF
Sbjct: 143 LVGENLVCKVADFGLARLIEDN---EWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 301 CTAFELAT 308
EL T
Sbjct: 200 ILLTELTT 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAF 304
D K+ DFG A +A + E + R+ + APE + + ++ D+WSF T +
Sbjct: 170 DRLVKIGDFGLA-KAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 305 ELAT 308
EL T
Sbjct: 229 ELLT 232
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
IL +++ H GI+H DLKPEN+LL S
Sbjct: 112 ILESVNHCHLN-GIVHRDLKPENLLLAS 138
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
IL ++++H+ I+H DLKPEN+LL S
Sbjct: 139 ILESVNHIHQH-DIVHRDLKPENLLLAS 165
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
IL + Y H GI+H +LKPEN+LL S
Sbjct: 137 ILESIAYCHSN-GIVHRNLKPENLLLAS 163
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 243 KPERCLDGIDMR---CKVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMW 297
KPE L + K+ DFG A N A T Y +PEV+ + YS VD+W
Sbjct: 155 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 214
Query: 298 SFACTAFELATG 309
+ + L G
Sbjct: 215 ACGVILYILLVG 226
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
+G G FS+V + T A+KI A + L ++ + ++ L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 104 IDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKV-REICKYILTGLDYLH 160
++ + G L MV EF+ D ++K + + V + IL L Y H
Sbjct: 92 LETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 161 RELGIIHTDLKPENILLVSTIDPSKDPIRSG 191
+ IIH D+KP +LL S + + P++ G
Sbjct: 148 -DNNIIHRDVKPHCVLLASKENSA--PVKLG 175
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
+ T + APEV+ R Y VD+W F L +G + F
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
IL +++ H GI+H DLKPEN+LL S
Sbjct: 112 ILESVNHCHLN-GIVHRDLKPENLLLAS 138
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAF 304
D K+ DFG A +A + E + R+ + APE + + ++ D+WSF T +
Sbjct: 153 DRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 305 ELAT 308
EL T
Sbjct: 212 ELLT 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 247 CLDGIDMRCKVVDFG-----NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301
C+ D K+ DFG ++ + + ++ APE + ++ S DMWSF
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 302 TAFELATGDMLFAPKSGQGFCEDEVGWFCI 331
+E+ + A + QG ++V F +
Sbjct: 221 VLWEITS----LAEQPYQGLSNEQVLKFVM 246
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 247 CLDGIDMRCKVVDFG-----NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301
C+ D K+ DFG ++ + + ++ APE + ++ S DMWSF
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 302 TAFELATGDMLFAPKSGQGFCEDEVGWFCI 331
+E+ + A + QG ++V F +
Sbjct: 221 VLWEITS----LAEQPYQGLSNEQVLKFVM 246
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAF 304
D K+ DFG A +A + E + R+ + APE + + ++ D+WSF T +
Sbjct: 148 DRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 206
Query: 305 ELAT 308
EL T
Sbjct: 207 ELLT 210
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAF 304
D K+ DFG A +A + E + R+ + APE + + ++ D+WSF T +
Sbjct: 153 DRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 305 ELAT 308
EL T
Sbjct: 212 ELLT 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAF 304
D K+ DFG A +A + E + R+ + APE + + ++ D+WSF T +
Sbjct: 147 DRLVKIGDFGLA-KAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 205
Query: 305 ELAT 308
EL T
Sbjct: 206 ELLT 209
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 247 CLDGIDMRCKVVDFG-----NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301
C+ D K+ DFG ++ + + ++ APE + ++ S DMWSF
Sbjct: 158 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 217
Query: 302 TAFELATGDMLFAPKSGQGFCEDEVGWFCI 331
+E+ + A + QG ++V F +
Sbjct: 218 VLWEITS----LAEQPYQGLSNEQVLKFVM 243
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + F + ++ APE + +S D+W+F
Sbjct: 140 CLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 200 LWEIATYGMSPYP 212
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRL 103
+G G FS+V + T A+KI A + L ++ + ++ L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 104 IDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKV-REICKYILTGLDYLH 160
++ + G L MV EF+ D ++K + + V + IL L Y H
Sbjct: 94 LETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 161 RELGIIHTDLKPENILLVSTIDPSKDPIRSG 191
+ IIH D+KP +LL S + + P++ G
Sbjct: 150 -DNNIIHRDVKPHCVLLASKENSA--PVKLG 177
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313
+ T + APEV+ R Y VD+W F L +G + F
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
IL + Y H GI+H +LKPEN+LL S
Sbjct: 114 ILESIAYCHSN-GIVHRNLKPENLLLAS 140
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 243 KPERCLDGIDMR---CKVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMW 297
KPE L + K+ DFG A N A T Y +PEV+ + YS VD+W
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 191
Query: 298 SFACTAFELATG 309
+ + L G
Sbjct: 192 ACGVILYILLVG 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
IL + Y H GI+H +LKPEN+LL S
Sbjct: 114 ILESIAYCHSN-GIVHRNLKPENLLLAS 140
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 243 KPERCLDGIDMR---CKVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMW 297
KPE L + K+ DFG A N A T Y +PEV+ + YS VD+W
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 191
Query: 298 SFACTAFELATG 309
+ + L G
Sbjct: 192 ACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVS 179
IL + Y H GI+H +LKPEN+LL S
Sbjct: 113 ILESIAYCHSN-GIVHRNLKPENLLLAS 139
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 243 KPERCLDGIDMR---CKVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMW 297
KPE L + K+ DFG A N A T Y +PEV+ + YS VD+W
Sbjct: 131 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 190
Query: 298 SFACTAFELATG 309
+ + L G
Sbjct: 191 ACGVILYILLVG 202
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 255 CKVVDFGNACRANKQFAEEIQTRQYRAPEVI--LRAGYSFSVDMWSFACTAFELATGDML 312
KV DFG + ++ + + Q+ APE I Y+ D +SFA + + TG+
Sbjct: 168 AKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 313 F 313
F
Sbjct: 228 F 228
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 346 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 405
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 406 LWEIATYGMSPYP 418
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 388 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 447
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 448 LWEIATYGMSPYP 460
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 119 MVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
+ +E +L ++ + L L + + + +GL +LH L I+H DLKP NIL+
Sbjct: 95 IAIELCAATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLH-SLNIVHRDLKPHNILI 151
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 170 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 307 AT 308
T
Sbjct: 229 FT 230
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 349 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 408
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 409 LWEIATYGMSPYP 421
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 125 GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177
G SL + + K ++ ++ +I + G+DYLH + IIH D+K NI L
Sbjct: 115 GSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFL 165
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 253 MRCKVVDFGNAC-----RANKQFAEEIQTRQYRAPEVILRAG---YSFSVDMWSFACTAF 304
+ K+ DFG A ++Q + + + APEVI +SF D++S+ +
Sbjct: 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
Query: 305 ELATGDMLFA 314
EL TG++ ++
Sbjct: 229 ELMTGELPYS 238
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFEL 306
D KV DFG A+ ++ APE + A +S D+WSF +E+
Sbjct: 144 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 170 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 307 AT 308
T
Sbjct: 229 FT 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 42 RKLGWGQF-SIVWLAYDT---RTSSYVALK-IQKSAAQFAQAALHEIEVLSAVADGDPSN 96
R+LG G F S+ YD T VA+K +Q S + + EIE+L ++ +
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156
K V ++L +++EFL LR + ++ K+ + I G+
Sbjct: 79 YKGVC--------YSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 157 DYLHRELGIIHTDLKPENILL 177
+YL + IH DL NIL+
Sbjct: 131 EYLGTK-RYIHRDLATRNILV 150
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 155 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 307 AT 308
T
Sbjct: 214 FT 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 248 LDGIDMRCKVVDFG-------NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300
L G ++ CKV DFG N A + I+ + APE L ++ D+WSF
Sbjct: 313 LVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK---WTAPEAALYGRFTIKSDVWSFG 369
Query: 301 CTAFELAT 308
EL T
Sbjct: 370 ILLTELTT 377
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 152 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 307 AT 308
T
Sbjct: 211 FT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 150 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
Query: 307 AT 308
T
Sbjct: 209 FT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 254 RCKVVDFG--NACRANKQFAEEIQTRQ----YRAPEVILRAGYSFSVDMWSFACTAFELA 307
R K+ DFG +K+F + + + + APE + + +S + D+WSF +EL
Sbjct: 152 RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 308 T 308
T
Sbjct: 212 T 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 159 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
Query: 307 AT 308
T
Sbjct: 218 FT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 156 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
Query: 307 AT 308
T
Sbjct: 215 FT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 155 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 307 AT 308
T
Sbjct: 214 FT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 152 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 307 AT 308
T
Sbjct: 211 FT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 183 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
Query: 307 AT 308
T
Sbjct: 242 FT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 151 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
Query: 307 AT 308
T
Sbjct: 210 FT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 157 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
Query: 307 AT 308
T
Sbjct: 216 FT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 158 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
Query: 307 AT 308
T
Sbjct: 217 FT 218
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 41 QRKLGWGQFSIVWLAYDTRTSSYVALKI---QKSAAQFAQAALHEIEVLSAVADGDPSNE 97
+ K+G G F V A S VA+KI Q A+ L E+ ++ + +
Sbjct: 42 KEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN---- 95
Query: 98 KCVIRLIDHFKHAGPNGQHLCMVLEFLGD-SLLRLI-KYSRYKGLELNKVREICKYILTG 155
I F A +L +V E+L SL RL+ K + L+ + + + G
Sbjct: 96 ------IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 156 LDYLH-RELGIIHTDLKPENILL 177
++YLH R I+H DLK N+L+
Sbjct: 150 MNYLHNRNPPIVHRDLKSPNLLV 172
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 155 RVKIGDFG-LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 307 AT 308
T
Sbjct: 214 FT 215
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 247 CLDGIDMRCKVVDFG---------NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
CL G + KV DFG A +F ++ APE + +S D+W
Sbjct: 143 CLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP-----IKWTAPESLAYNKFSIKSDVW 197
Query: 298 SFACTAFELATGDMLFAP 315
+F +E+AT M P
Sbjct: 198 AFGVLLWEIATYGMSPYP 215
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALK-IQKSAAQFAQAALHEIEVLSAVA 90
+ + Y+ +KLG G FS V L + ALK I Q + A E ++
Sbjct: 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF- 83
Query: 91 DGDPSNEKCVIRLIDH-FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKG--LELNKVRE 147
N ++RL+ + + G + ++ F +L I+ + KG L +++
Sbjct: 84 -----NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW 138
Query: 148 ICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
+ I GL+ +H + G H DLKP NILL P
Sbjct: 139 LLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQP 173
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 247 CLDGIDMRCKVVDFG---------NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
CL G + KV DFG A +F ++ APE + +S D+W
Sbjct: 140 CLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP-----IKWTAPESLAYNKFSIKSDVW 194
Query: 298 SFACTAFELATGDMLFAP 315
+F +E+AT M P
Sbjct: 195 AFGVLLWEIATYGMSPYP 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 252 DMRCKVVDFG--NACRANKQFAEEIQTRQ----YRAPEVILRAGYSFSVDMWSFACTAFE 305
+ + K+ DFG A +K+ R + APE ++++ + + D+WSF T E
Sbjct: 162 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 221
Query: 306 LAT 308
L T
Sbjct: 222 LLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 252 DMRCKVVDFG--NACRANKQFAEEIQTRQ----YRAPEVILRAGYSFSVDMWSFACTAFE 305
+ + K+ DFG A +K+ R + APE ++++ + + D+WSF T E
Sbjct: 150 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 209
Query: 306 LAT 308
L T
Sbjct: 210 LLT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 247 CLDGIDMRCKVVDFG---------NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
CL G + KV DFG A +F ++ APE + +S D+W
Sbjct: 140 CLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP-----IKWTAPESLAYNKFSIKSDVW 194
Query: 298 SFACTAFELATGDMLFAP 315
+F +E+AT M P
Sbjct: 195 AFGVLLWEIATYGMSPYP 212
>pdb|2GRV|A Chain A, Crystal Structure Of Lpqw
pdb|2GRV|B Chain B, Crystal Structure Of Lpqw
pdb|2GRV|C Chain C, Crystal Structure Of Lpqw
Length = 621
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 19 YRKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA 78
+R+GG A + NG +AQ G F+ + D RT+ V ++ + + Q
Sbjct: 252 FRRGGAPAALADSIRNGDTQVAQVHGGAATFAQLSAIPDVRTARIVTPRVMQLTLRAQQP 311
Query: 79 ALHEIEVLSAVADGDPSNEKCVIRLID 105
L DP K ++ LID
Sbjct: 312 KL-----------ADPQVRKAILGLID 327
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 246 RCLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFAC 301
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 160 NCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGV 219
Query: 302 TAFELATGDM 311
+E+AT M
Sbjct: 220 LLWEIATYGM 229
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 247 CLDGIDMRCKVVDFG---------NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
CL G + KV DFG A +F ++ APE + +S D+W
Sbjct: 147 CLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP-----IKWTAPESLAYNKFSIKSDVW 201
Query: 298 SFACTAFELATGDMLFAP 315
+F +E+AT M P
Sbjct: 202 AFGVLLWEIATYGMSPYP 219
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 247 CLDGIDMRCKVVDFGNA-----CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301
C+ D K+ DFG ++ + + ++ APE + ++ S DMWSF
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 302 TAFELATGDMLFAPKSGQGFCEDEVGWFCI 331
+E+ + A + QG ++V F +
Sbjct: 221 VLWEITS----LAEQPYQGLSNEQVLKFVM 246
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 152 ILTGLDYLHRELGIIHTDLKPENILLVSTI 181
IL + + H ++G++H +LKPEN+LL S +
Sbjct: 119 ILEAVLHCH-QMGVVHRNLKPENLLLASKL 147
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 202 LWEIATYGMSPYP 214
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 144 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 204 LWEIATYGMSPYP 216
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 254 RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 306
R K+ DFG + Q E + ++ + APE + + +S + D+WSF +EL
Sbjct: 153 RVKIGDFG-LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
Query: 307 AT 308
T
Sbjct: 212 FT 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 202 LWEIATYGMSPYP 214
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 147 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 207 LWEIATYGMSPYP 219
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 202 LWEIATYGMSPYP 214
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 202 LWEIATYGMSPYP 214
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 147 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 207 LWEIATYGMSPYP 219
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 144 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 204 LWEIATYGMSPYP 216
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 247 CLDGIDMRCKVVDFG---------NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
CL G + KV DFG A +F ++ APE + +S D+W
Sbjct: 155 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-----IKWTAPESLAYNKFSIKSDVW 209
Query: 298 SFACTAFELATGDMLFAP 315
+F +E+AT M P
Sbjct: 210 AFGVLLWEIATYGMSPYP 227
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 247 CLDGIDMRCKVVDFG---------NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 297
CL G + KV DFG A +F ++ APE + +S D+W
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-----IKWTAPESLAYNKFSIKSDVW 196
Query: 298 SFACTAFELATGDMLFAP 315
+F +E+AT M P
Sbjct: 197 AFGVLLWEIATYGMSPYP 214
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 146 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 205
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 206 LWEIATYGMSPYP 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 303 AFELATGDM 311
+E+AT M
Sbjct: 202 LWEIATYGM 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 147 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 207 LWEIATYGMSPYP 219
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 147 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 207 LWEIATYGMSPYP 219
>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target)
Length = 387
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 245 ERCLDGIDMRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRA 288
E ++ D K++D G+ACR + Q FA +R + ++ILRA
Sbjct: 230 EHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRA 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 144 CLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 204 LWEIATYGMSPYP 216
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 247 CLDGIDMRCKVVDFG-NACRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACT 302
CL G + KV DFG + + + ++ APE + +S D+W+F
Sbjct: 143 CLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 202
Query: 303 AFELATGDMLFAP 315
+E+AT M P
Sbjct: 203 LWEIATYGMSPYP 215
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 117 LCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPEN 174
L ++L+++ G+ L + R+ E V+ I+ L++LH+ LGII+ D+K EN
Sbjct: 134 LHLILDYINGGELFTHLSQRERFTEHE---VQIYVGEIVLALEHLHK-LGIIYRDIKLEN 189
Query: 175 ILLVST 180
ILL S
Sbjct: 190 ILLDSN 195
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 276 TRQYRAPEVIL--RAGYSFSVDMWSFACTAFELATG 309
T +Y AP+++ +G+ +VD WS +EL TG
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 16/144 (11%)
Query: 39 IAQRKLGWGQFSIVWLAYDTRTSSYV---ALKIQKSAAQFAQAALHEIEVLSAVADGDPS 95
+ K G G F +V+ Y T+ V A + + + Q EI+V +
Sbjct: 25 VGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXA-------- 76
Query: 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYIL 153
KC + +G LC+V + G L RL L + +I +
Sbjct: 77 --KCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAA 134
Query: 154 TGLDYLHRELGIIHTDLKPENILL 177
G+++LH E IH D+K NILL
Sbjct: 135 NGINFLH-ENHHIHRDIKSANILL 157
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACTAFEL 306
K+ DFG A + + + + R ++ APE I Y+F D+WS+ +EL
Sbjct: 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACTAFEL 306
K+ DFG A + + + + R ++ APE I Y+F D+WS+ +EL
Sbjct: 203 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACTAFEL 306
K+ DFG A + + + + R ++ APE I Y+F D+WS+ +EL
Sbjct: 208 KICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACTAFEL 306
K+ DFG A + + + + R ++ APE I Y+F D+WS+ +EL
Sbjct: 208 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACTAFEL 306
K+ DFG A + + + + R ++ APE I Y+F D+WS+ +EL
Sbjct: 201 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAE-EIQTRQYRAPEVILR--AGYSFSVDMWSFACTAF 304
L G+ ++ G R F + ++ + +PEV+ + GY D++S TA
Sbjct: 153 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 212
Query: 305 ELATGDMLF 313
ELA G + F
Sbjct: 213 ELANGHVPF 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 20/103 (19%)
Query: 257 VVDFGNA-CRANKQFAEEIQTRQY-------RAPEVILRAGYSFSVDMWSFACTAFELAT 308
+ DFG+A C +++ T Y APEV+L VD+WS C +
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 309 GDMLFAPKSGQGFCEDEVGWFCIFICFFVDPLQHDIRDVINSC 351
G C +F +C + +R++ SC
Sbjct: 268 G------------CHPWTQFFRGPLCLKIASEPPPVREIPPSC 298
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 153 LTGLDYLHRELGIIHTDLKPENILLVS 179
L GL+YLH I+H D+K +N+LL S
Sbjct: 176 LEGLEYLHSRR-ILHGDVKADNVLLSS 201
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 12/76 (15%)
Query: 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEVGWFCIFICF 335
T + APEV+L VD+WS C + G C +F +C
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG------------CHPWTQFFRGPLCL 301
Query: 336 FVDPLQHDIRDVINSC 351
+ +R++ SC
Sbjct: 302 KIASEPPPVREIPPSC 317
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 153 LTGLDYLHRELGIIHTDLKPENILLVS 179
L GL+YLH I+H D+K +N+LL S
Sbjct: 195 LEGLEYLHSRR-ILHGDVKADNVLLSS 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 130 RLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184
R++ Y +K EL +++ + GL Y+H + ++H D+KP NI + T P+
Sbjct: 107 RIMSY--FKEAEL---KDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPN 155
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 130 RLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184
R++ Y +K EL +++ + GL Y+H + ++H D+KP NI + T P+
Sbjct: 105 RIMSY--FKEAEL---KDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPN 153
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 130 RLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184
R++ Y +K EL +++ + GL Y+H + ++H D+KP NI + T P+
Sbjct: 105 RIMSY--FKEAEL---KDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPN 153
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Query: 257 VVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
V+ AC I T Y +PE+ Y+ D+W+ C +EL T
Sbjct: 178 TVELARAC---------IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALK---IQKSAAQFAQAALHEIEVLSAVADGD 93
+Y+ +K+G G F L T +K I + +++ + + E+ VL+ + +
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYI 152
+++ + F+ G L +V+++ G L + I + + +++ + I
Sbjct: 85 ------IVQYRESFEENG----SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134
Query: 153 LTGLDYLHRELGIIHTDLKPENILLV 178
L ++H + I+H D+K +NI L
Sbjct: 135 CLALKHVH-DRKILHRDIKSQNIFLT 159
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 248 LDGIDMRCKVVDFGNACRANKQFAE-EIQTRQYRAPEVILR--AGYSFSVDMWSFACTAF 304
L G+ ++ G R F + ++ + +PEV+ + GY D++S TA
Sbjct: 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 228
Query: 305 ELATGDMLF 313
ELA G + F
Sbjct: 229 ELANGHVPF 237
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 252 DMRCKVVDFGNACRANKQFAEEIQTR-------QYRAPEVILRAGYSFSVDMWSFACTAF 304
++ CKV DFG R + E T ++ APE I ++ + D+WSF +
Sbjct: 183 NLVCKVSDFG-LSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMW 241
Query: 305 ELAT 308
E+ T
Sbjct: 242 EVMT 245
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 130 RLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184
R++ Y +K EL +++ + GL Y+H + ++H D+KP NI + T P+
Sbjct: 103 RIMSY--FKEAEL---KDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPN 151
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 147 EICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
EIC GL YLH IIH D+K NILL P
Sbjct: 143 EICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVP 178
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 147 EICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183
EIC GL YLH IIH D+K NILL P
Sbjct: 143 EICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVP 178
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 250 GIDMRCKVVDFGNACR---ANKQFAEEIQTRQYR----APEVILRAGYSF---SVDMWSF 299
++ R ++D R A+ +F+ + R Y APE + + S DMWSF
Sbjct: 138 ALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197
Query: 300 ACTAFELATGDMLFA 314
A +EL T ++ FA
Sbjct: 198 AVLLWELVTREVPFA 212
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 278 QYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEV 326
++ A E ILR ++ D+WS+ T +EL M F K G E+
Sbjct: 186 KWMALESILRRRFTHQSDVWSYGVTVWEL----MTFGAKPYDGIPAREI 230
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 256 KVVDFGNACRANKQFAEEIQTR-----QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
K+ DFG A N + T ++ APE + Y+ D+WSF +E+ T
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 256 KVVDFGNACRANKQFAEEIQTR-----QYRAPEVILRAGYSFSVDMWSFACTAFELAT 308
K+ DFG A N + T ++ APE + Y+ D+WSF +E+ T
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE---------------IQTRQYRAPEVILR 287
KP +D KV DFG ++ E+ + T+ Y +PE I
Sbjct: 191 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHG 250
Query: 288 AGYSFSVDMWSFACTAFEL 306
YS VD++S FEL
Sbjct: 251 NNYSHKVDIFSLGLILFEL 269
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 256 KVVDFGNA--CRANKQFAEEIQTR---QYRAPEVILRAGYSFSVDMWSFACTAFEL 306
K+ DFG A N + + TR ++ APE I YS D+WS+ +E+
Sbjct: 239 KICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEI 294
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 153 LTGLDYLHRELGIIHTDLKPENILLVS 179
L GL+YLH I+H D+K +N+LL S
Sbjct: 160 LEGLEYLHTRR-ILHGDVKADNVLLSS 185
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 254 RCKVVDFGNA-CRANKQFAEEIQTRQY-------RAPEVILRAGYSFSVDMWSFACTAFE 305
R + DFG+A C + + T Y APEV++ VD+WS C
Sbjct: 189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 248
Query: 306 LATG 309
+ G
Sbjct: 249 MLNG 252
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 243 KPERCLDGIDMRCKVVDFGNACRANKQFAEE---------------IQTRQYRAPEVILR 287
KP +D KV DFG ++ E+ + T+ Y +PE I
Sbjct: 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG 204
Query: 288 AGYSFSVDMWSFACTAFEL 306
YS VD++S FEL
Sbjct: 205 NSYSHKVDIFSLGLILFEL 223
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 153 LTGLDYLHRELGIIHTDLKPENILLVS 179
L GL+YLH I+H D+K +N+LL S
Sbjct: 174 LEGLEYLHTRR-ILHGDVKADNVLLSS 199
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 254 RCKVVDFGNA-CRANKQFAEEIQTRQY-------RAPEVILRAGYSFSVDMWSFACTAFE 305
R + DFG+A C + + T Y APEV++ VD+WS C
Sbjct: 203 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 262
Query: 306 LATG 309
+ G
Sbjct: 263 MLNG 266
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 153 LTGLDYLHRELGIIHTDLKPENILLVS 179
L GL+YLH I+H D+K +N+LL S
Sbjct: 176 LEGLEYLHTRR-ILHGDVKADNVLLSS 201
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 254 RCKVVDFGNA-CRANKQFAEEIQTRQY-------RAPEVILRAGYSFSVDMWSFACTAFE 305
R + DFG+A C + + T Y APEV++ VD+WS C
Sbjct: 205 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 264
Query: 306 LATG 309
+ G
Sbjct: 265 MLNG 268
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 106 HFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGI 165
H + G+ + +V+EF+ + L + ++ + + I G+ YL ++G
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA-DMGY 166
Query: 166 IHTDLKPENILLVSTI 181
+H DL NIL+ S +
Sbjct: 167 VHRDLAARNILVNSNL 182
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 47 GQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106
G+F VW A + YVA+KI Q Q+ +E EV S + +++ I
Sbjct: 35 GRFGCVWKA--QLLNEYVAVKI--FPIQDKQSWQNEYEVYSLPG----MKHENILQFIGA 86
Query: 107 FKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL--- 163
K L ++ F L + + + N++ I + + GL YLH ++
Sbjct: 87 EKRGTSVDVDLWLITAFHEKG--SLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 164 ------GIIHTDLKPENILLVSTI 181
I H D+K +N+LL + +
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNL 168
>pdb|3E5B|A Chain A, 2.4 A Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis
pdb|3E5B|B Chain B, 2.4 A Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis
pdb|3E5B|C Chain C, 2.4 A Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis
pdb|3E5B|D Chain D, 2.4 A Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis
pdb|3OQ8|A Chain A, Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis, Bound To The Product Mimic Malonate
pdb|3OQ8|B Chain B, Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis, Bound To The Product Mimic Malonate
pdb|3OQ8|C Chain C, Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis, Bound To The Product Mimic Malonate
pdb|3OQ8|D Chain D, Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis, Bound To The Product Mimic Malonate
pdb|3P0X|A Chain A, Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis, Bound To Magnesium Isocitrate
pdb|3P0X|B Chain B, Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis, Bound To Magnesium Isocitrate
pdb|3P0X|C Chain C, Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis, Bound To Magnesium Isocitrate
pdb|3P0X|D Chain D, Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis, Bound To Magnesium Isocitrate
Length = 433
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAA 79
QR++G G F V LA SS A+K AQF AA
Sbjct: 394 QREVGTGYFDAVSLAITGGQSSTTAMKESTETAQFKPAA 432
>pdb|3EOL|A Chain A, 2.0a Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis (P43212)
pdb|3EOL|B Chain B, 2.0a Crystal Structure Of Isocitrate Lyase From Brucella
Melitensis (P43212)
Length = 433
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAA 79
QR++G G F V LA SS A+K AQF AA
Sbjct: 394 QREVGTGYFDAVSLAITGGQSSTTAMKESTETAQFKPAA 432
>pdb|2YZL|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole-
Succinocarboxamide Synthase With Adp From
Methanocaldococcus Jannaschii
pdb|2Z02|A Chain A, Crystal Structure Of
Phosphoribosylaminoimidazolesuccinocarboxamide Synthase
Wit Atp From Methanocaldococcus Jannaschii
pdb|2Z02|B Chain B, Crystal Structure Of
Phosphoribosylaminoimidazolesuccinocarboxamide Synthase
Wit Atp From Methanocaldococcus Jannaschii
Length = 242
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 141 ELNKVREICKYILTGLDYLHRELGIIHTDLKPE-------NILLVSTIDPS 184
ELNK++EI + L L E GII D K E N+L+ I P
Sbjct: 153 ELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIGKDREGNLLVADEISPD 203
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.141 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,956,727
Number of Sequences: 62578
Number of extensions: 394853
Number of successful extensions: 3347
Number of sequences better than 100.0: 845
Number of HSP's better than 100.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 422
Number of HSP's that attempted gapping in prelim test: 1521
Number of HSP's gapped (non-prelim): 1528
length of query: 352
length of database: 14,973,337
effective HSP length: 100
effective length of query: 252
effective length of database: 8,715,537
effective search space: 2196315324
effective search space used: 2196315324
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)