BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018687
(352 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 199 FSIIKCQLQKASLAEND---AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQET 255
F I+ + K + +E + AF F D NG + LR V + L L+ +E
Sbjct: 360 FLIMMARKMKDTDSEEEIREAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEV 413
Query: 256 DDLWAQADVDGNGVVNYEEFKQRM 279
D++ +AD+DG+G VNYEEF Q M
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQMM 437
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 295 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 348
Query: 264 VDGNGVVNYEEF 275
DG+G +++ EF
Sbjct: 349 ADGDGTIDFPEF 360
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 388 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 275 FKQRM 279
F Q M
Sbjct: 442 FVQMM 446
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 357
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 358 ADGNGTIDFPEFLTMM 373
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 388 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 275 FKQRM 279
F Q M
Sbjct: 442 FVQMM 446
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 357
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 358 ADGNGTIDFPEFLTMM 373
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 388 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 275 FKQRM 279
F Q M
Sbjct: 442 FVQMM 446
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 357
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 358 ADGNGTIDFPEFLTMM 373
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +ADVDG+G VNY
Sbjct: 84 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADVDGDGQVNY 135
Query: 273 EEFKQRMW 280
EEF Q M
Sbjct: 136 EEFVQVMM 143
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 206 LQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADV 264
L +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVDA 54
Query: 265 DGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 55 DGNGTIDFPEF 65
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 388 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 275 FKQRM 279
F Q M
Sbjct: 442 FVQMM 446
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 357
Query: 264 VDGNGVVNYEEFKQRM 279
DG+G +++ EF M
Sbjct: 358 ADGDGTIDFPEFLTMM 373
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +ADVDG+G VNY
Sbjct: 87 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 273 EEFKQRMW 280
EEF Q M
Sbjct: 139 EEFVQVMM 146
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTDEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 57 ADGNGTIDFPEF 68
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 389 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 442
Query: 275 FKQRM 279
F Q M
Sbjct: 443 FVQMM 447
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 305 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 358
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 359 ADGNGTIDFPEFLTMM 374
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 387 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 275 FKQRM 279
F Q M
Sbjct: 441 FVQMM 445
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 303 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 356
Query: 264 VDGNGVVNYEEFKQRM 279
DG+G +++ EF M
Sbjct: 357 ADGDGTIDFPEFLTMM 372
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +ADVDG+G VNY
Sbjct: 87 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 273 EEFKQRMW 280
EEF Q M
Sbjct: 139 EEFVQVMM 146
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTDEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 57 ADGNGTIDFPEF 68
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 354 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 275 FKQRM 279
F Q M
Sbjct: 408 FVQMM 412
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 270 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 323
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 324 ADGNGTIDFPEFLTMM 339
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 88 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 275 FKQRM 279
F Q M
Sbjct: 142 FVQMM 146
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 58 ADGNGTIDFPEF 69
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 354 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 275 FKQRM 279
F Q M
Sbjct: 408 FVQMM 412
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 270 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 323
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 324 ADGNGTIDFPEFLTMM 339
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 351 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 404
Query: 275 FKQRM 279
F Q M
Sbjct: 405 FVQMM 409
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 267 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 320
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 321 ADGNGTIDFPEFLTMM 336
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 387 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 275 FKQRM 279
F Q M
Sbjct: 441 FVQMM 445
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 303 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 356
Query: 264 VDGNGVVNYEEFKQRM 279
DG+G +++ EF M
Sbjct: 357 ADGDGTIDFPEFLTMM 372
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 388 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 275 FKQRM 279
F Q M
Sbjct: 442 FVQMM 446
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 357
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 358 ADGNGTIDFPEFLTMM 373
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 387 EAFRVFDKDGNGYI-----SAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 275 FKQRM 279
F Q M
Sbjct: 441 FVQMM 445
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 303 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 356
Query: 264 VDGNGVVNYEEFKQRM 279
DG+G +++ EF M
Sbjct: 357 ADGDGTIDFPEFLTMM 372
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 13 EAFRVFDKDGNGYISA-----AELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 275 FKQRM 279
F Q M
Sbjct: 67 FVQMM 71
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 6 EAFRVFDKDGNGYISA-----AELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 59
Query: 275 FKQRM 279
F Q M
Sbjct: 60 FVQMM 64
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 12 EAFRVFDKDGNGYISA-----AELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 275 FKQRM 279
F Q M
Sbjct: 66 FVQMM 70
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 9 EAFRVFDKDGNGYISA-----AELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 275 FKQRM 279
F Q M
Sbjct: 63 FVQMM 67
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 91 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 144
Query: 275 FKQRM 279
F Q M
Sbjct: 145 FVQMM 149
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 7 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 60
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 61 ADGNGTIDFPEFLTMM 76
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 85 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 275 FKQRM 279
F Q M
Sbjct: 139 FVQMM 143
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 54
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 55 ADGNGTIDFPEFLTMM 70
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 83 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 136
Query: 275 FKQRM 279
F Q M
Sbjct: 137 FVQMM 141
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF+ F D +G IT +R +L P Q D+ + D DGNG +++ E
Sbjct: 10 EAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVDADGNGTIDFPE 63
Query: 275 FKQRM 279
F M
Sbjct: 64 FLTMM 68
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 10 EAFRVFDKDGNGYISA-----AELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 275 FKQRM 279
F Q M
Sbjct: 64 FVQMM 68
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 89 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 142
Query: 275 FKQRM 279
F Q M
Sbjct: 143 FVQMM 147
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 5 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 58
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 59 ADGNGTIDFPEFLTMM 74
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 85 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 275 FKQRM 279
F Q M
Sbjct: 139 FVQMM 143
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 54
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 55 ADGNGTIDFPEFLTMM 70
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 88 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 275 FKQRM 279
F Q M
Sbjct: 142 FVQMM 146
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 84 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 137
Query: 275 FKQRM 279
F Q M
Sbjct: 138 FVQMM 142
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 206 LQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADV 264
L + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVDA 54
Query: 265 DGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 55 DGNGTIDFPEFLTMM 69
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 88 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 275 FKQRM 279
F Q M
Sbjct: 142 FVQMM 146
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 88 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 275 FKQRM 279
F Q M
Sbjct: 142 FVQMM 146
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 85 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 275 FKQRM 279
F Q M
Sbjct: 139 FVQMM 143
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF+ F D +G IT +R +L P Q D+ + D DGNG +++ E
Sbjct: 12 EAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVDADGNGTIDFPE 65
Query: 275 FKQRM 279
F M
Sbjct: 66 FLTMM 70
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 86 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 139
Query: 275 FKQRM 279
F Q M
Sbjct: 140 FVQMM 144
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 2 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 55
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 56 ADGNGTIDFPEFLTMM 71
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 87 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 275 FKQRM 279
F Q M
Sbjct: 141 FVQMM 145
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 88 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 275 FKQRM 279
F Q M
Sbjct: 142 FVQMM 146
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 87 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 275 FKQRM 279
F Q M
Sbjct: 141 FVQMM 145
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 93 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 146
Query: 275 FKQRM 279
F Q M
Sbjct: 147 FVQMM 151
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 9 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 62
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 63 ADGNGTIDFPEFLTMM 78
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 87 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 275 FKQRM 279
F Q M
Sbjct: 141 FVQMM 145
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 9 EAFRVFDKDGNGYISA-----AELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 275 FKQRM 279
F Q M
Sbjct: 63 FVQMM 67
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYEE
Sbjct: 87 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 275 FKQRM 279
F Q M
Sbjct: 141 FVQMM 145
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DG+G +++ EF M
Sbjct: 57 ADGDGTIDFPEFLTMM 72
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D + +AD+DG+G VNYEE
Sbjct: 88 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDQMIREADIDGDGQVNYEE 141
Query: 275 FKQRM 279
F Q M
Sbjct: 142 FVQMM 146
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +ADVDG+G +NY
Sbjct: 88 EAFRVFDKDQNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADVDGDGQINY 139
Query: 273 EEFKQRMW 280
EEF + M
Sbjct: 140 EEFVKVMM 147
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL ++E +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTDDQISEFKEAFSLFDKDGDG-CITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 58 ADGNGTIDFPEF 69
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 41.6 bits (96), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +AD+DG+G VNYE+
Sbjct: 11 EAFRVFDKDGNGYISAAD-----LRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 275 FKQRM 279
F Q M
Sbjct: 65 FVQMM 69
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +AD+DG+G VNY
Sbjct: 88 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 273 EEFKQRMWN 281
EEF M +
Sbjct: 140 EEFVTMMTS 148
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +AD+DG+G VNY
Sbjct: 87 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 273 EEFKQRMWN 281
EEF M +
Sbjct: 139 EEFVTMMTS 147
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +AD+DG+G VNY
Sbjct: 85 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 273 EEFKQRMWN 281
EEF M +
Sbjct: 137 EEFVTMMTS 145
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +AD+DG+G VNY
Sbjct: 88 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 273 EEFKQRMWN 281
EEF M
Sbjct: 140 EEFVTMMTT 148
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +AD+DG+G VNY
Sbjct: 87 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 273 EEFKQRM 279
EEF M
Sbjct: 139 EEFVTMM 145
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +A++DG+G VNYEE
Sbjct: 87 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 140
Query: 275 FKQRM 279
F Q M
Sbjct: 141 FVQMM 145
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +ADVDG+G +NYEE
Sbjct: 8 EAFRVFDKDQNGFISA-----AELRHV-MTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 275 FKQRM 279
F + M
Sbjct: 62 FVKVM 66
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +A++DG+G VNYEE
Sbjct: 82 EAFRVFDKDGNGYISAAE-----LRHV-MTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 135
Query: 275 FKQRM 279
F Q M
Sbjct: 136 FVQMM 140
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF+ F D +G IT +R +L P Q D+ + D DGNG +++ E
Sbjct: 10 EAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVDADGNGTIDFPE 63
Query: 275 FKQRM 279
F M
Sbjct: 64 FLTMM 68
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ ++D+DG+G VNY
Sbjct: 88 EAFRVFDKDGNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIRESDIDGDGQVNY 139
Query: 273 EEFKQRMWN 281
EEF M +
Sbjct: 140 EEFVTMMTS 148
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG +I+ + LR V + L L+ E D++ +AD+DG+G +NYEE
Sbjct: 87 EAFKVFDRDGNG-LISAAE----LRHV-MTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 275 FKQRM 279
F + M
Sbjct: 141 FVRMM 145
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
+L + +AE +AFA F D +G IT +R +L P Q D+ + D
Sbjct: 3 ELTEEQIAEFKEAFALFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 57 ADGNGTIDFPEF 68
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG +I+ + LR V + L L+ E D++ +AD+DG+G +NYEE
Sbjct: 87 EAFKVFDRDGNG-LISAAE----LRHV-MTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 275 FKQRM 279
F + M
Sbjct: 141 FVRMM 145
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AFA F D +G IT +R +L P Q D+ + D
Sbjct: 3 QLTEEQIAEFKEAFALFDKDGDG-TITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 56
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 57 ADGNGTIDFPEF 68
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 215 DAFAFFKADNNGDVITHSAFCEA--LRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNY 272
+AF F D NG F A LR V + L L+ +E D++ +ADVDG+G +NY
Sbjct: 88 EAFRVFDKDQNG-------FISAAELRHV-MTNLGEKLTDEEVDEMIREADVDGDGQINY 139
Query: 273 EEFKQRMW 280
+EF + M
Sbjct: 140 DEFVKVMM 147
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + ++E +AF+ F D +G IT +R +L P Q D+ + D
Sbjct: 4 QLTEDQISEFKEAFSLFDKDGDG-CITTKELGTVMR--SLGQNPTEAELQ---DMINEVD 57
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 58 ADGNGTIDFPEF 69
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG I+ S LR V + L L+ +E + + +AD+DG+G VNYEE
Sbjct: 87 EAFKVFDKDQNG-YISASE----LRHV-MINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 140
Query: 275 FKQRMWNL 282
F + M +
Sbjct: 141 FVKMMMTV 148
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D +G IT +R L + +E D+ ++ D DGNG + ++E
Sbjct: 14 EAFGLFDKDGDG-CITVEELATVIR-----SLDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 275 FKQRM 279
F M
Sbjct: 68 FLSLM 72
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ E D++ +AD+DG+G +NYEE
Sbjct: 12 EAFKVFDRDGNGLISA-----AELRHV-MTNLGEKLTDDEVDEMIREADIDGDGHINYEE 65
Query: 275 FKQRM 279
F + M
Sbjct: 66 FVRMM 70
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 206 LQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADV 264
L + +AE +AFA F DNNG I+ S +R + L+ P S E +DL + DV
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGS-ISSSELATVMRSLGLS--P---SEAEVNDLMNEIDV 58
Query: 265 DGNGVVNYEEF 275
DGN + + EF
Sbjct: 59 DGNHQIEFSEF 69
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 218 AFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEFKQ 277
AF D +G+ +A LR V + L L+ +E D++ +AD+DG+G VNYEEF Q
Sbjct: 34 AFRVEDKDGNGYISAA---ELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
Query: 278 RM 279
M
Sbjct: 90 MM 91
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 206 LQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADV 264
L + +AE +AFA F DNNG I+ S +R + L+ S E +DL + DV
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGS-ISSSELATVMRSLGLSP-----SEAEVNDLMNEIDV 57
Query: 265 DGNGVVNYEEFKQRM 279
DGN + + EF M
Sbjct: 58 DGNHQIEFSEFLALM 72
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E D++ +A +DG+G VNYE+
Sbjct: 388 EAFRVFGKDGNGYI-----SAAQLRHV-MTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQ 441
Query: 275 FKQRM 279
F Q M
Sbjct: 442 FVQMM 446
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT +R +L P Q D+ +
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGG-ITTKQLGTVMR--SLGQNPTEAELQ---DMINEVG 357
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ +F M
Sbjct: 358 ADGNGTIDFPQFLTMM 373
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG V LR V + L LS +E D++ AD DG+G VNYEE
Sbjct: 87 EAFRVFDKDGNGFVSAAE-----LRHV-MTRLGEKLSDEEVDEMIRAADTDGDGQVNYEE 140
Query: 275 F 275
F
Sbjct: 141 F 141
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 206 LQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADV 264
L + +AE +AFA F DNNG I+ S +R + L+ P S E +DL + DV
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGS-ISSSELATVMRSLGLS--P---SEAEVNDLMNEIDV 57
Query: 265 DGNGVVNYEEFKQRM 279
DGN + + EF M
Sbjct: 58 DGNHQIEFSEFLALM 72
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 206 LQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADV 264
L + +AE +AFA F DNNG I+ S +R + L+ P S E +DL + DV
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGS-ISSSELATVMRSLGLS--P---SEAEVNDLMNEIDV 57
Query: 265 DGNGVVNYEEFKQRM 279
DGN + + EF M
Sbjct: 58 DGNHQIEFSEFLALM 72
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E + + +AD+DG+G VNYEE
Sbjct: 8 EAFKVFDKDQNGYISA-----SELRHV-MINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 275 FKQRM 279
F + M
Sbjct: 62 FVKMM 66
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V + L L+ +E + + +AD+DG+G VNYEE
Sbjct: 13 EAFKVFDKDQNGYISA-----SELRHV-MINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 275 FKQRM 279
F + M
Sbjct: 67 FVKMM 71
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 22/104 (21%)
Query: 206 LQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADV 264
L + +AE +AFA F DN+G I+ S +R + L+ P S E DL + DV
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGS-ISASELATVMRSLGLS--P---SEAEVADLMNEIDV 58
Query: 265 DGNGVVNYEEFKQRMWNLSCSAQIENNCNDNMEDSKDCSEKEIL 308
DGN + + EF M S Q++ CND SE+E+L
Sbjct: 59 DGNHAIEFSEFLALM-----SRQLK--CND--------SEQELL 87
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F D +G + + LR+ +AGL L +E D + +ADVD +G VNYEEF
Sbjct: 11 AFRAFDQDGDGHITV-----DELRRA-MAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 276 KQRM 279
+ +
Sbjct: 65 ARML 68
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V L L+ +E D+ +AD+DG+G VNYEE
Sbjct: 87 EAFRVFDKDGNGYISAAE-----LRHVX-TNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 275 FKQ 277
F Q
Sbjct: 141 FVQ 143
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT R +L P Q D + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVXR--SLGCNPTEAELQ---DXINEVD 56
Query: 264 VDGNGVVNYEEF 275
DGNG +N+ EF
Sbjct: 57 ADGNGTINFPEF 68
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V L L+ +E D+ +AD+DG+G VNYEE
Sbjct: 87 EAFRVFDKDGNGYISAAE-----LRHVX-TNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 275 FKQ 277
F Q
Sbjct: 141 FVQ 143
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT R +L P Q D + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVXR--SLGQNPTEAELQ---DXINEVD 56
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 57 ADGNGTIDFPEF 68
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 201 IIKCQLQKASLAENDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWA 260
I+ Q+++ E AF D +GD A LR V + L ++ +E D++
Sbjct: 71 IMAKQMRETDTEEEMREAFKIFDRDGDGFISPA---ELRFV-MINLGEKVTDEEIDEMIR 126
Query: 261 QADVDGNGVVNYEEFKQRMWNLS 283
+AD DG+G++NYEEF +W +S
Sbjct: 127 EADFDGDGMINYEEF---VWMIS 146
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG + LR V L L+ +E D +AD+DG+G VNYEE
Sbjct: 88 EAFRVFDKDGNGYISAAE-----LRHVX-TNLGEKLTDEEVDQXIREADIDGDGQVNYEE 141
Query: 275 FKQ 277
F Q
Sbjct: 142 FVQ 144
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G IT R +L P Q D + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVXR--SLGQNPTEAELQ---DXINEVD 57
Query: 264 VDGNGVVNYEEF 275
DGNG +++ EF
Sbjct: 58 ADGNGTIDFPEF 69
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 35.4 bits (80), Expect = 0.051, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF + + NG + T + +R++ LA L LS ++ D + + D DG+G V++EE
Sbjct: 7 EAFRLYDKEGNGYIST-----DVMREI-LAELDETLSSEDLDAMIDEIDADGSGTVDFEE 60
Query: 275 F 275
F
Sbjct: 61 F 61
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 34.3 bits (77), Expect = 0.094, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ + D +G IT +R + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLYDKDGDG-TITTKELGTVMRSLGL-----NPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
DAF F + +G++ T S EA+R++ L + + ++ +++ D++G+G V++EE
Sbjct: 106 DAFREFDTNGDGEIST-SELREAMRKL----LGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 275 FKQRM 279
F + M
Sbjct: 161 FVRMM 165
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
DAF F + +G++ T S EA+R++ L + + ++ +++ D++G+G V++EE
Sbjct: 92 DAFREFDTNGDGEIST-SELREAMRKL----LGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 275 FKQRM 279
F + M
Sbjct: 147 FVRMM 151
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF + + NG + T + +R++ LA L LS ++ D + + D DG+G V++EE
Sbjct: 95 EAFRLYDKEGNGYIST-----DVMREI-LAELDETLSSEDLDAMIDEIDADGSGTVDFEE 148
Query: 275 FKQRM 279
F M
Sbjct: 149 FMGVM 153
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 57
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 58 ADGNGTIDFPEFLTMM 73
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
DAF F + +G++ T S EA+R++ L + + ++ +++ D++G+G V++EE
Sbjct: 11 DAFREFDTNGDGEIST-SELREAMRKL----LGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 275 FKQRM 279
F + M
Sbjct: 66 FVRMM 70
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 250 LSFQETDDLWAQADVDGNGVVNYEEFKQRM 279
L+ E +++ A+ D DG+G V+YEEFK M
Sbjct: 40 LTEDEIENMIAETDTDGSGTVDYEEFKCLM 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 33.9 bits (76), Expect = 0.16, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLTMM 72
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.5 bits (75), Expect = 0.20, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T A +R L + +E D + + D DG+G +++EEF
Sbjct: 25 AFDMFDADGGGDIST-KALGTVMRM-----LGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
DAF F + +G++ T S EA+R A L + + ++ +++ D++G+G V++EE
Sbjct: 92 DAFREFDTNGDGEIST-SELREAMR----ALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 275 FKQRM 279
F + M
Sbjct: 147 FVRMM 151
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D +G IT +R L + +E D+ ++ D DGNG + ++E
Sbjct: 14 EAFGLFDKDGDG-CITVEELATVIRS-----LDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 275 FKQRM 279
F M
Sbjct: 68 FLSLM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D +G IT +R L + +E D+ ++ D DGNG + ++E
Sbjct: 14 EAFGLFDKDGDG-CITVEELATVIRS-----LDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 275 FKQRM 279
F M
Sbjct: 68 FLSLM 72
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 32.3 bits (72), Expect = 0.40, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL + +AE +AF+ F D +G + T + L V + L + E D+ + D
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-----KELGTV-MRSLGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DG+G +++ EF M
Sbjct: 57 ADGDGTIDFPEFLTMM 72
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 204 CQLQKASLAENDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
+ QK + E AF F D +G + +V + L + +E + A D
Sbjct: 3 TEEQKQEIRE--AFDLFDTDGSGTIDAKEL------KVAMRALGFEPKKEEIKKMIADID 54
Query: 264 VDGNGVVNYEEFKQRM 279
DG+G +++EEF Q M
Sbjct: 55 KDGSGTIDFEEFLQMM 70
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 204 CQLQKASLAEND-------AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETD 256
Q+ A + E D AF F D G + + L++V L ++ +E
Sbjct: 67 LQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKN-----LKRV-AKELGENMTDEELQ 120
Query: 257 DLWAQADVDGNGVVNYEEFKQRMWNLSC 284
++ +AD DG+G VN EEF + M S
Sbjct: 121 EMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T +R L + +E D + + D DG+G +++EEF
Sbjct: 25 AFDMFDADGGGDISTKE-LGTVMRM-----LGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T +R L + +E D + + D DG+G +++EEF
Sbjct: 25 AFDMFDADGGGDISTKE-LGTVMRM-----LGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
DAF + NG + LRQ+ L L L+ E ++L + V G+G +NYE
Sbjct: 80 DAFRALDKEGNGTIQEAE-----LRQL-LLNLGDALTSSEVEELMKEVSVSGDGAINYES 133
Query: 275 F 275
F
Sbjct: 134 F 134
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T +R L + +E D + + D DG+G +++EEF
Sbjct: 25 AFDMFDADGGGDISTKE-LGTVMRM-----LGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T +R L + +E D + + D DG+G +++EEF
Sbjct: 25 AFDMFDADGGGDISTKE-LGTVMRM-----LGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 31.6 bits (70), Expect = 0.74, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T +R L + +E D + + D DG+G +++EEF
Sbjct: 25 AFDMFDADGGGDISTKE-LGTVMRM-----LGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T +R L + +E D + + D DG+G +++EEF
Sbjct: 22 AFDMFDADGGGDISTKE-LGTVMRM-----LGQNPTKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 31.6 bits (70), Expect = 0.75, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T +R L + +E D + + D DG+G +++EEF
Sbjct: 14 AFDMFDADGGGDISTKE-LGTVMRM-----LGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 31.2 bits (69), Expect = 0.79, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 211 LAENDAFAFFKADNNGD-VITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGV 269
+A++ F + D NGD I+ S +ALR + S E + A+ D DG+G
Sbjct: 1 MADDMERIFKRFDTNGDGKISLSELTDALRTLG------STSADEVQRMMAEIDTDGDGF 54
Query: 270 VNYEEF 275
+++ EF
Sbjct: 55 IDFNEF 60
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 31.2 bits (69), Expect = 0.88, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 205 QLQKASLAE-NDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
QL ++E +AF+ F D +G IT +R L + E D+ + D
Sbjct: 3 QLTDEQISEFKEAFSLFDKDGDG-CITTKELGTVMRS-----LGQNPTEAELQDMINEVD 56
Query: 264 VDGNGVVNYEEFKQRM 279
DGNG +++ EF M
Sbjct: 57 ADGNGTIDFPEFLNLM 72
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD I+ +R L P + +E D + + D DG+G +++EEF
Sbjct: 22 AFDMFDADGGGD-ISVKELGTVMRM--LGQTP---TKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 31.2 bits (69), Expect = 0.98, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 219 FFKADNNGD-VITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
F + D NGD I+ S +ALR + S E + A+ D DG+G +++ EF
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLG------STSADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD I+ +R L P + +E D + + D DG+G +++EEF
Sbjct: 22 AFDMFDADGGGD-ISVKELGTVMRM--LGQTP---TKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 75 ILIVNTHLLFPHDSSLSVVRLHQVYKILQYLELYQTENK-------LNHIPIILCGDWNG 127
I V THL + D + V+ QV +L +LE E + P+++CGD+N
Sbjct: 549 IWAVTTHLHW--DPKFNDVKTFQVGVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNS 606
Query: 128 SKRGHVYKFLRS 139
VY+ + +
Sbjct: 607 YINSAVYELINT 618
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 217 FAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
F DN+G IT + L++V L E DL AD+D +G ++Y EF
Sbjct: 16 FKMIDTDNSG-TITFDELKDGLKRVGSE-----LMESEIKDLMDAADIDKSGTIDYGEF 68
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF++F D +G + L ++ A +GL DD+ + D D +G ++Y EF
Sbjct: 87 AFSYFDKDGSGYI--------TLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEF 138
Query: 276 KQRM 279
M
Sbjct: 139 AAMM 142
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 236 EALRQVNLAGLPYGLSFQET-DDLWAQADVDGNGVVNYEEFK 276
E L+Q+ A P L T DDL+ + D +G+G V++EEF+
Sbjct: 29 EELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQ 70
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 204 CQLQKASLAENDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQAD 263
+ QK + E AF F D +G + +V + L + +E + ++ D
Sbjct: 23 TEEQKQEIRE--AFDLFDTDGSGTIDAKEL------KVAMRALGFEPKKEEIKKMISEID 74
Query: 264 VDGNGVVNYEEF 275
DG+G +++EEF
Sbjct: 75 KDGSGTIDFEEF 86
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 29.6 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+AF F D NG I+ A+R L Y + E + + + D+DG+G V++EE
Sbjct: 40 EAFKVFDRDGNG-FISKQELGTAMRS-----LGYMPNEVELEVIIQRLDMDGDGQVDFEE 93
Query: 275 F 275
F
Sbjct: 94 F 94
>pdb|1Z25|A Chain A, Structure Of P.Furiosus Argonaute With Bound Mn2+
pdb|1Z26|A Chain A, Structure Of Pyrococcus Furiosus Argonaute With Bound
Tungstate
Length = 771
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 227 DVITHSAFCEALRQVN--LAGLPYGLSFQETDDLWAQADVDGNGVVNYEEFKQRMWNLSC 284
D+ + E + QV+ + G GL+F + A+ + +EE K+R++NL+
Sbjct: 450 DLNSDKGIIEVVEQVSSFMKGKELGLAF-----IAARNKLSSE---KFEEIKRRLFNLNV 501
Query: 285 SAQIENNCNDNMEDSKDCSEKEILGFAVKDAFLF 318
+Q+ N D +++ +D ++ L V+ LF
Sbjct: 502 ISQVVN--EDTLKNKRDKYDRNRLDLFVRHNLLF 533
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 29.6 bits (65), Expect = 2.6, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F AD GD+ T +R L + E D + + D DG+G +++EEF
Sbjct: 25 AFDMFDADGGGDISTKE-LGTVMRM-----LGQNPTKCELDAIICEVDEDGSGTIDFEEF 78
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F ++ G V LR + L GL L+ E D+L +VD NG ++Y++F
Sbjct: 10 AFQVFDKESTGKVSVGD-----LRYM-LTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 219 FFKADNNGD-VITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
F + D NGD I+ S +AL+ + ++ E + A+ D DG+G ++++EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG------SVTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 219 FFKADNNGD-VITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
F + D NGD I+ + EAL+ + ++ E + A+ D DG+G ++++EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG------SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 29.3 bits (64), Expect = 3.5, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 207 QKASLAENDAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDG 266
QK + E AF F D +G + +V + L + +E + ++ D DG
Sbjct: 28 QKQEIRE--AFDLFDTDGSGTIDAKEL------KVAMRALGFEPKKEEIKKMISEIDKDG 79
Query: 267 NGVVNYEEFKQRM 279
+G +++EEF M
Sbjct: 80 SGTIDFEEFLTMM 92
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F ++ G V LR + L GL L+ E D+L +VD NG ++Y++F
Sbjct: 88 AFQVFDKESTGKVSVGD-----LRYM-LTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 141
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 28.9 bits (63), Expect = 4.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 236 EALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
+ R+V LA PY + ++ + + DVDGNG +N +EF
Sbjct: 21 DEFREVALAFSPY-FTQEDIVKFFEEIDVDGNGELNADEF 59
>pdb|1U04|A Chain A, Crystal Structure Of Full Length Argonaute From Pyrococcus
Furiosus
Length = 771
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 271 NYEEFKQRMWNLSCSAQIENNCNDNMEDSKDCSEKEILGFAVKDAFLF 318
+EE K+R++NL+ +Q+ N D +++ +D ++ L V+ LF
Sbjct: 488 KFEEIKRRLFNLNVISQVVN--EDTLKNKRDKYDRNRLDLFVRHNLLF 533
>pdb|3QTG|A Chain A, Crystal Structure Of Pyruvate Kinase From Pyrobaculum
Aerophilum
pdb|3QTG|B Chain B, Crystal Structure Of Pyruvate Kinase From Pyrobaculum
Aerophilum
Length = 461
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 173 CGVDFIWLRNPNQSRK-PLQA-SWAEAVFSIIKCQLQKASLAENDAFAFFK 221
GVD +WL N S K PL A SW + ++ Q+ ++ L +N F K
Sbjct: 314 MGVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQSPLLQNSRDRFAK 364
>pdb|2KI8|A Chain A, Solution Nmr Structure Of Tungsten Formylmethanofuran
Dehydrogenase Subunit D From Archaeoglobus Fulgidus,
Northeast Structural Genomics Consortium Target Att7
Length = 146
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 17 ARTNNRGDGLLTALHRDYFNVLNYRELLFNDF-------GDRVAQLVHVESVVPF 64
RT N+G + L +YFN +NY E+ D+ GDRV VV F
Sbjct: 31 GRTLNQGATVEEKLTEEYFNAVNYAEINEEDWNALGLQEGDRVKVKTEFGEVVVF 85
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 28.5 bits (62), Expect = 5.3, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 215 DAFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEE 274
+ F DN+G IT + L++V L E DL AD+D +G ++Y E
Sbjct: 27 ELFKMIDTDNSG-TITFDELKDGLKRVGSE-----LMESEIKDLMDAADIDKSGTIDYGE 80
Query: 275 F 275
F
Sbjct: 81 F 81
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 28.1 bits (61), Expect = 6.9, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 250 LSFQETDDLWAQADVDGNGVVNYEEF 275
LS +ET L A D DG+G + EEF
Sbjct: 41 LSAKETKTLMAAGDKDGDGKIGVEEF 66
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 28.1 bits (61), Expect = 7.0, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 216 AFAFFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEF 275
AF F A+ +G VI F +++V L+ E ++ +AD DGNGV++ EF
Sbjct: 13 AFKVFDANGDG-VIDFDEFKFIMQKVG----EEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.1 bits (61), Expect = 7.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 250 LSFQETDDLWAQADVDGNGVVNYEEF 275
LS +ET L A D DG+G + EEF
Sbjct: 77 LSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 28.1 bits (61), Expect = 7.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 250 LSFQETDDLWAQADVDGNGVVNYEEF 275
LS +ET L A D DG+G + EEF
Sbjct: 77 LSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 250 LSFQETDDLWAQADVDGNGVVNYEEF 275
LS +ET L A D DG+G + EEF
Sbjct: 77 LSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 28.1 bits (61), Expect = 8.1, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 219 FFKADNNGDVITHSAFCEALRQVNLAGLPYGLSFQETDDLWAQADVDGNGVVNYEEFK 276
F K D GD + L Q L G+S D+L+ + D +G+G V++EEF+
Sbjct: 11 FEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMS--TLDELFEELDKNGDGEVSFEEFQ 66
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 28.1 bits (61), Expect = 8.3, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 250 LSFQETDDLWAQADVDGNGVVNYEEF 275
LS +ET L A D DG+G + EEF
Sbjct: 77 LSAKETKTLMAAGDKDGSGKIEVEEF 102
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 28.1 bits (61), Expect = 8.5, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 250 LSFQETDDLWAQADVDGNGVVNYEEFKQ 277
L+ ET L A AD DG+G + EEF++
Sbjct: 78 LTESETKSLMAAADNDGDGKIGAEEFQE 105
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,343,470
Number of Sequences: 62578
Number of extensions: 487089
Number of successful extensions: 1287
Number of sequences better than 100.0: 142
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 1127
Number of HSP's gapped (non-prelim): 209
length of query: 352
length of database: 14,973,337
effective HSP length: 100
effective length of query: 252
effective length of database: 8,715,537
effective search space: 2196315324
effective search space used: 2196315324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)