BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018689
(352 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 312 bits (799), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/387 (48%), Positives = 227/387 (58%), Gaps = 89/387 (22%)
Query: 4 SGGNFGGAAAAAPPQQEPQMYFCHQCNRTVRVTPSP-SSDLVCPSCNGGFIEELETPNPS 62
S GN G A + +FC+QCNRTV VT SP SSD CP CN GF+EE + PNP+
Sbjct: 3 SDGNVTGGGGANTVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPN 62
Query: 63 -----VNPNPNPM---DAFLL--DDLSTLLGM------------------------GPTR 88
+NPNPN + D FL D ++LL + GPTR
Sbjct: 63 QGSGFLNPNPNSIPFHDLFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTR 122
Query: 89 SFT-DPSEFNPFVFLQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGDYF 147
S DP F+PF F+QN+L +LR++GA I+FV++NN + FRLPAN+GDYF
Sbjct: 123 SGRGDPFAFDPFTFIQNHLNDLRSSGAQIEFVIQNNP--------SDQGFRLPANIGDYF 174
Query: 148 IGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELN 207
IGPGLEQLIQQLAENDPNRYGTPPASKSAIEALP + I ++ ++S+ +QCAVC D FE
Sbjct: 175 IGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEG 234
Query: 208 EEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNS 267
EA+QMPCKH+YH DC++PWLELHNSCPVCR+ELPTDDPDYE+R G
Sbjct: 235 TEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRG------------- 281
Query: 268 MNQSFNLGFGFGGGGSGGNDGESGGNAETP--RTVERRLRISLPWPFNAFASRAETSGNS 325
G SGGNDG++ G RTVER RISLPWPF A
Sbjct: 282 -----------AQGTSGGNDGDNSGQRSDGDNRTVERSFRISLPWPFQARGP-------- 322
Query: 326 GSGSGGTNDGDSTSGNRGSEPRQEDLD 352
G GD+ +E RQEDLD
Sbjct: 323 -----GPAPGDN------AETRQEDLD 338
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 280 bits (715), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/339 (46%), Positives = 200/339 (58%), Gaps = 71/339 (20%)
Query: 4 SGGNFGGAAAAAPPQQEPQMYFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEELETPNP-- 61
SG N G+AAAAP + +M+FC+QCN+TV ++ S S+D CP CN GF+EE E PNP
Sbjct: 3 SGVNSTGSAAAAP--EVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQ 60
Query: 62 SVNPNPNPMDAF--LLDDLSTLLGMGPTRSFTDPS------------------------- 94
S+N NPN D+F + D STLL + S PS
Sbjct: 61 SLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQS 120
Query: 95 -EFNPFVFLQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGDYFIGPGLE 153
F+PF FLQN+LQ LR++G +FV+EN+ + DP R+P N GDYF GPGLE
Sbjct: 121 DAFDPFTFLQNHLQTLRSSGTHFEFVIENHPS-DPGN-------RMPGNFGDYFFGPGLE 172
Query: 154 QLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQM 213
QLIQQLAENDPNRYGTPPASKSAI+ALP++K+ + M+ S+ +QCAVC D FE + +QM
Sbjct: 173 QLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQM 232
Query: 214 PCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMNQSFN 273
PCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R G+ + +
Sbjct: 233 PCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQ----- 287
Query: 274 LGFGFGGGGSGGNDGESGGNAETPRTVERRLRISLPWPF 312
+TPR I LPWPF
Sbjct: 288 ---------------------QTPR-----FSIQLPWPF 300
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 125/290 (43%), Gaps = 77/290 (26%)
Query: 13 AAAPPQQEPQMYFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEEL--ETPN------PSVN 64
A A PQ P YFCH C +V + P D +CP C GFIEEL ET N PS
Sbjct: 2 AEASPQ--PGRYFCHCC--SVEIVPR-LPDYICPRCESGFIEELPEETRNTENGSAPSTA 56
Query: 65 PNPNPMDAFLLDDLSTLLGMGPTRSFTDPSEFNPFVF----------------------- 101
P F +++ L FT P ++ F F
Sbjct: 57 PTDQNRQPF--ENVDQHL-------FTLPQGYSQFAFGIFDDSFEIPTFPPGAQADDGRD 107
Query: 102 -----------LQNY--------LQNLRANGA-----SIQFVVENNSN--VDPAAG---G 132
Y L RA G +++ +++ N + PAA G
Sbjct: 108 PESRREREHQSRHRYGARQPRARLTARRATGRHEGVPTLEGIIQQLVNGIISPAAVPSLG 167
Query: 133 AGAAFRLPANLGDYFIGP-GLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMS 191
G L +N DY G GL+ +I QL N G PPA K I+ALP++ + E +
Sbjct: 168 LGPWGVLHSNPMDYAWGANGLDTIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHVG 226
Query: 192 SDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYEL 241
S +C VCK+ + L E RQ+PC H++H CI+PWLE H+SCPVCR L
Sbjct: 227 S-GLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 54/295 (18%)
Query: 24 YFCHQCNRTVRVTPSPS-SDLVCPSCNGGFIEELETPNPSVNPNPNPMDAFLLDDLSTLL 82
+FCH C V SP + +CP C GFIEE+ + + + +D + L
Sbjct: 20 FFCHFCKGEV----SPKLPEYICPRCESGFIEEVTDDSSFLGGGGSRIDNTTTTHFAELW 75
Query: 83 G-MGPTRSFTDPSEFNPFVFLQNYLQNLRAN-----------GA---------------- 114
G + T F D F PF+ Q+ RAN GA
Sbjct: 76 GHLDHTMFFQD---FRPFLSSSPLDQDNRANERGHQTHTDFWGARPPRLPLGRRYRSRGS 132
Query: 115 -------SIQFVVEN-------NSNVDPAAGGAGAAFRLPANLGDYFIG-PGLEQLIQQL 159
+I+ ++++ NS + + + L +N GDY G GL+ ++ QL
Sbjct: 133 SRPDRSPAIEGILQHIFAGFFANSAIPGSPHPFSWSGMLHSNPGDYAWGQTGLDAIVTQL 192
Query: 160 AENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIY 219
N G PPA K I +LP++ + + + +C VCK+ + + EE RQ+PC H +
Sbjct: 193 LGQLENT-GPPPADKEKITSLPTVTVTQEQVDM-GLECPVCKEDYTVEEEVRQLPCNHFF 250
Query: 220 HPDCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMNQSFNL 274
H CI+PWLELH++CPVCR L +D Q ++ + +N +N++ ++ +
Sbjct: 251 HSSCIVPWLELHDTCPVCRKSLNGED-STRQSQSTEASASNRFSNDSQLHDRWTF 304
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 71/112 (63%), Gaps = 6/112 (5%)
Query: 141 ANLGDYFIGPGLEQLIQQLAEND-PNRYGTPPASKSAIEALPSIKINEAMMSS--DSSQC 197
ANL I GL+ +I + ++ P R PPASK +E LP I E ++ ++C
Sbjct: 174 ANLMQELIN-GLDMIIPDILDDGGPPR--APPASKEVVEKLPVIIFTEELLKKFGAEAEC 230
Query: 198 AVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYE 249
+CK++ + ++ +++PCKH +HP C+ PWL+ HNSCP+CR+ELPTDD YE
Sbjct: 231 CICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYE 282
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 73/125 (58%), Gaps = 14/125 (11%)
Query: 138 RLPANLGDYFI-GPGLEQLIQQLAENDPNRYG----TPPASKSAIEALPSIKIN----EA 188
R N DY G E L+Q LAE D G PPA+KSAIEAL + +++ E
Sbjct: 194 RYAGNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEM 253
Query: 189 MMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDY 248
+M CAVCKD + E +++PC H YH DCI+PWL NSCPVCR++L TDD +Y
Sbjct: 254 VMV-----CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEY 308
Query: 249 EQRRN 253
E+ R
Sbjct: 309 EEERK 313
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 24 YFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEELETPNPSVNPNPNP 69
++C+ CN+ V V + +VC CN GF+E ++ P P+ +P P
Sbjct: 15 HWCYHCNKRV-VVETLDDFVVCCECNKGFVESIQ-PTPAAYSSPAP 58
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 114/272 (41%), Gaps = 55/272 (20%)
Query: 20 EPQMYFCHQCNRTVRVTPSPSSDLVCPSCNGGFI----EELETPNPSVNPNPNPMD---- 71
P YFCH C +V + P D +CP C GFI EE + P+ P D
Sbjct: 7 HPGRYFCHCC--SVEIVPR-LPDYICPRCESGFIEELPEETRSTENGSAPSTAPTDQSRP 63
Query: 72 -------------------AF-LLDDLSTLLGMGP------------TRSFTDPSEF--- 96
AF + DD + P R PS
Sbjct: 64 PLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHPSRHRYG 123
Query: 97 --NPFVFLQNYLQNLRANGA-SIQFVVEN--NSNVDPAA-GGAGAAFRLPANLGDYFIGP 150
P L R G +++ +++ N + PA G L +N DY G
Sbjct: 124 ARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPMDYAWGA 183
Query: 151 -GLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEE 209
GL+ +I QL N G PPA K I+ALP++ + E + S +C VCKD + L E
Sbjct: 184 NGLDAIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHVGS-GLECPVCKDDYALGER 241
Query: 210 ARQMPCKHIYHPDCIMPWLELHNSCPVCRYEL 241
RQ+PC H++H CI+PWLE H+SCPVCR L
Sbjct: 242 VRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 81/137 (59%), Gaps = 4/137 (2%)
Query: 139 LPANLGDYFIG-PGLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQC 197
L +N GDY G GL+ ++ QL N G PPA K I +LP++ + + +++ +C
Sbjct: 172 LHSNPGDYAWGQTGLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVNT-GLEC 229
Query: 198 AVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGN 257
VCK+ + + E+ RQ+PC H +H CI+PWLELH++CPVCR L +D Q ++ +
Sbjct: 230 PVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGED-STRQTQSSEAS 288
Query: 258 GNNNSNNNNSMNQSFNL 274
+N +N++ ++ +
Sbjct: 289 ASNRFSNDSQLHDRWTF 305
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 132 GAGAAFRLPANLGDYFIGP-GLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMM 190
G G L +N DY G GL+ +I QL N G PPA I+ALP+I+I E +
Sbjct: 163 GVGPWGVLHSNPMDYAWGANGLDTIITQLL-NQFENTGPPPADTEKIQALPTIQITEEHV 221
Query: 191 SSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYEL 241
S +C VCK+ + + E RQ+PC H++H DCI+PWLE H++CPVCR L
Sbjct: 222 GS-GLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 24 YFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEEL 56
YFCH C T + P + CP C+ GFIEEL
Sbjct: 11 YFCHSC--TAEIIPR-LPEYTCPRCDSGFIEEL 40
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 132 GAGAAFRLPANLGDYFIGP-GLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMM 190
G G L +N DY G GL+ +I QL N G PPA K I+ALP++ + E +
Sbjct: 168 GLGPWGVLHSNPMDYAWGANGLDAIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHV 226
Query: 191 SSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYEL 241
S +C VCKD + L E RQ+PC H++H CI+PWLE H+SCPVCR L
Sbjct: 227 GS-GLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
Score = 39.7 bits (91), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 13 AAAPPQQEPQMYFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEEL 56
A A PQ P YFCH C +V + P D +CP C GFIEEL
Sbjct: 2 AEASPQ--PGRYFCHCC--SVEIVPR-LPDYICPRCESGFIEEL 40
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 132 GAGAAFRLPANLGDYFIGP-GLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMM 190
G G L +N DY G GL+ +I QL N G PPA I+ALP+I+I E +
Sbjct: 164 GVGPWGVLHSNPMDYAWGANGLDTIITQLL-NQFENTGPPPADNEKIQALPTIQITEEHV 222
Query: 191 SSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYEL 241
S +C VCK+ + + E RQ+PC H++H DCI+PWLE H++CPVCR L
Sbjct: 223 GS-GLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 24 YFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEEL 56
YFCH C T +TP + CP C+ GFIEEL
Sbjct: 11 YFCHSC--TAEITPR-LPEYTCPRCDSGFIEEL 40
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 132 GAGAAFRLPANLGDYFIGP-GLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMM 190
G G L +N DY G GL+ +I QL N G PPA I+ALP+I+I E +
Sbjct: 164 GVGPWGVLHSNPMDYAWGANGLDTIITQLL-NQFENTGPPPADTDKIQALPTIQITEEHV 222
Query: 191 SSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYEL 241
+C VCK+ + + E RQ+PC H++H DCI+PWLE H++CPVCR L
Sbjct: 223 GF-GLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 24 YFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEEL 56
YFCH C T +TP + CP C+ GFIEEL
Sbjct: 11 YFCHSC--TAEITPR-LPEYTCPRCDSGFIEEL 40
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 170 PPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLE 229
PPASK +E+LP + + + + +C VC FE E RQ+PC+H++H CI+PWL
Sbjct: 53 PPASKKVVESLPKVTVTPEQADA-ALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLG 111
Query: 230 LHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMN 269
NSCP+CR+ELPTD PDYE+ + + ++
Sbjct: 112 KTNSCPLCRHELPTDSPDYEEFKQEKARRQQKEHRLECLH 151
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 170 PPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLE 229
PPA+K+ +++LP + I+ + +C VC FE E R+MPCKH++H CI+PWL
Sbjct: 53 PPAAKAVVQSLPVVIISPEQ-ADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLN 111
Query: 230 LHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMN 269
NSCP+CR ELPTD+ DYE+ + + ++
Sbjct: 112 KTNSCPLCRLELPTDNADYEEFKKDKERRRQREHRLEDLH 151
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 163 DPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPD 222
D + PPA+K+ +E+LP I+ A +C VC FE E +MPC H++H +
Sbjct: 57 DWEHHLPPPAAKAVVESLPRTVISSA---KADLKCPVCLLEFEAEETVIEMPCHHLFHSN 113
Query: 223 CIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMN 269
CI+PWL NSCP+CR+ELPTDD YE+ + + +++
Sbjct: 114 CILPWLSKTNSCPLCRHELPTDDDSYEEHKKDKARRQQQQHRLENLH 160
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 5/106 (4%)
Query: 169 TPPASKSAIEALPSIKINEAMMSSD--SSQCAVCKDSFELNEEARQMPCKHIYHPDCIMP 226
P ASK AI LP ++E + S + +C+VCK+ E ++ R +PCKH +H +CI+
Sbjct: 43 VPEASKRAILELP---VHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILL 99
Query: 227 WLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMNQSF 272
WL+ NSCP+CRYEL TDDP YE+ R + N N++ S
Sbjct: 100 WLKKTNSCPLCRYELETDDPVYEELRRFRQDEANRRERENTLLDSM 145
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 137 FRLPANLGDYFIGP-GLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSS 195
F L N GDY G GL+ +I QL E PA + I + K + ++ +
Sbjct: 336 FNLSGNPGDYAWGARGLDDIISQLMEQAQGHNAPAPAPEDVIAKMKVQKPPKELIDEEG- 394
Query: 196 QCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYEQRRNG- 254
+C +C + F++N++ Q+PCKH +H +CI PWL ++ +C +CR + DP+ +QR N
Sbjct: 395 ECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPV---DPNSQQRNNTS 451
Query: 255 --NGNGNNNSNNNN 266
+ NG+N SN+ N
Sbjct: 452 TDSANGHNPSNHAN 465
Score = 35.0 bits (79), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 26/93 (27%)
Query: 18 QQEPQMYFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEELETPNPSVNPNPNPMDAFLLDD 77
+ +P +++CH C+ + P + CP CN F+E +E P+ P +P A
Sbjct: 2 ESQPVIWYCHSCSNEFQ---RPGN---CPRCNSDFVEMVE---PNTAPEDDPRAA----- 47
Query: 78 LSTLLGMGPTRSFTDPSEFN-PFVFLQNYLQNL 109
+F + +EFN P LQN LQ+L
Sbjct: 48 -----------NFVNATEFNDPNAMLQNILQSL 69
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 163 DPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPD 222
D + + PPA+K+ +E LP I S +C VC FE E A +MPC H++H
Sbjct: 45 DWDHHLPPPAAKTVVENLPRTVIRG---SQAELKCPVCLLEFEEEETAIEMPCHHLFHSS 101
Query: 223 CIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMN 269
CI+PWL NSCP+CRYELPTDD YE+ R + +++
Sbjct: 102 CILPWLSKTNSCPLCRYELPTDDDTYEEHRRDKARKQQQQHRLENLH 148
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 170 PPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLE 229
PPA+K +E+LP + + + + +C VC FE E RQ+PC+H++H CI+PWL
Sbjct: 53 PPAAKKVVESLPKVTVTPEQADA-ALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLG 111
Query: 230 LHNSCPVCRYELPTDDP 246
NSCP+CR+ELPTD P
Sbjct: 112 KTNSCPLCRHELPTDSP 128
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 163 DPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPD 222
D + + PPA+K+A+E LP I S +C VC FE E A +MPC H++H +
Sbjct: 45 DWDHHLPPPAAKTAVENLPRTVIRG---SQAELKCPVCLLEFEEEETAIEMPCHHLFHSN 101
Query: 223 CIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMN 269
CI+PWL NSCP+CR+ELPTDD YE+ + + +++
Sbjct: 102 CILPWLSKTNSCPLCRHELPTDDDTYEEHKRDKARKQQQKHRLENLH 148
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 144 GDYFIGPGLEQLI-----QQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCA 198
G + PG L + L D + PPA+K+ +E+LP I S +C
Sbjct: 33 GAWSWAPGSRSLFNRMDFEDLGLVDWEHHLPPPAAKAVVESLPRTVIRS---SKAELKCP 89
Query: 199 VCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNG 258
VC FE E +MPC H++H +CI+PWL NSCP+CR+ELPTDD YE+ +
Sbjct: 90 VCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDSYEEHKKDKARR 149
Query: 259 NNNSNNNNSMN 269
+ +++
Sbjct: 150 QQQQHRLENLH 160
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 26/186 (13%)
Query: 141 ANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPS--IKINEAMMSSDSSQCA 198
A L YFI Q I+ D N+ A+K AI L + +K + D CA
Sbjct: 211 AWLIFYFI-----QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCA 265
Query: 199 VCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELP-----------TDDPD 247
VC +S++ N+ R +PCKH++H C+ PWL H +CP+C+ + TD+
Sbjct: 266 VCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVA 325
Query: 248 YEQRRNGNGNGNNNSNNNNSMNQSFNLG---FGFGGGGSGGNDGESGGNAETPRTVERRL 304
++ R N + + +LG G DGE TPRT E +
Sbjct: 326 FDMERLTRTQAVNRRSALGDLANDSSLGLEPLRTSGISPLPQDGEL-----TPRTGEINI 380
Query: 305 RISLPW 310
++ W
Sbjct: 381 AVTKEW 386
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 141 ANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPS--IKINEAMMSSDSSQCA 198
A L YFI Q I+ D N+ A+K AI L + +K + D CA
Sbjct: 211 AWLIFYFI-----QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCA 265
Query: 199 VCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELP-----------TDDPD 247
VC +S++ N+ R +PCKH++H C+ PWL H +CP+C+ + TD+
Sbjct: 266 VCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVA 325
Query: 248 YEQRRNGNGNGNNNSNNNNSMNQSFNLG---FGFGGGGSGGNDGESGGNAETPRTVERRL 304
++ R N + +LG G DGE TPRT E +
Sbjct: 326 FDMERLTRTQAVNRRAALGDLAGDSSLGLEPLRTSGISPLPQDGEL-----TPRTGEINI 380
Query: 305 RISLPW 310
++ W
Sbjct: 381 AVTKEW 386
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 26/186 (13%)
Query: 141 ANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPS--IKINEAMMSSDSSQCA 198
A L YFI Q I+ D N+ A+K AI L + +K + D CA
Sbjct: 211 AWLIFYFI-----QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCA 265
Query: 199 VCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELP-----------TDDPD 247
VC +S++ N+ R +PCKH++H C+ PWL H +CP+C+ + TD+
Sbjct: 266 VCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVA 325
Query: 248 YEQRRNGNGNGNNNSNNNNSMNQSFNLG---FGFGGGGSGGNDGESGGNAETPRTVERRL 304
++ R N + + +LG G DGE TPRT E +
Sbjct: 326 FDMERLTRTQAVNRRSALGDLAGDNSLGLEPLRTSGISPLPQDGEL-----TPRTGEINI 380
Query: 305 RISLPW 310
++ W
Sbjct: 381 AVTKEW 386
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 173 SKSAIEALP--SIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLEL 230
+K I LP ++K E + D+ CAVC ++F++ + R +PCKHI+H CI PWL
Sbjct: 239 TKKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLD 298
Query: 231 HNSCPVCRYEL 241
H +CP+C+ ++
Sbjct: 299 HRTCPMCKLDV 309
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 174 KSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMP-CKHIYHPDCIMPWLELHN 232
+S IE+LP + D +CAVC FE E R +P CKH +H +C+ WL+ H+
Sbjct: 123 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 182
Query: 233 SCPVCRYELPTDD 245
+CP+CRY + +D
Sbjct: 183 TCPLCRYRVDPED 195
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 180 LPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRY 239
L ++K E + D+ CAVC ++F++ + R +PCKHI+H CI PWL H +CP+C+
Sbjct: 252 LHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKL 311
Query: 240 EL 241
++
Sbjct: 312 DV 313
>sp|A8WWR3|HRDL1_CAEBR E3 ubiquitin-protein ligase hrd-like protein 1 OS=Caenorhabditis
briggsae GN=hrdl-1 PE=3 SV=1
Length = 578
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 166 RYGTPPASKSAIE-ALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCI 224
R+ T IE A PS+K ++ +C VC +EL +R++PC H +H C+
Sbjct: 323 RHRTHKKIFEHIESAYPSVK-----AANSDDRCIVC---WELLGTSRRLPCSHQFHDWCL 374
Query: 225 MPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMNQSFNL-GFGFGGGGS 283
M WL +SCP CRY +P+ P E R +GNGN N F L F G S
Sbjct: 375 MWWLAQDSSCPTCRYVIPS--PQEEASRTDSGNGNTMFRFNGRTFGFFTLPSFTVEVGSS 432
Query: 284 GGN 286
GN
Sbjct: 433 FGN 435
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 102 LQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGDYFIGPGLEQLIQQLAE 161
LQ Y+ SI F+V ++ A L Y+I Q +
Sbjct: 200 LQKYVSRTSVVFVSISFIVLMIISL--------------AWLVFYYI-----QRFRYANA 240
Query: 162 NDPNRYGTPPASKSAIEALP--SIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIY 219
D N+ A+K AI L +IK + SD CAVC + ++ N+ R +PC+H++
Sbjct: 241 RDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLF 300
Query: 220 HPDCIMPWLELHNSCPVCRYEL 241
H C+ PWL H +CP+C+ +
Sbjct: 301 HKSCVDPWLLDHRTCPMCKMNI 322
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 162 NDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHP 221
N NR T A L +K E + D+ CAVC ++++ + R +PCKHI+H
Sbjct: 231 NQSNRKETKKAISQL--QLHRVKKGEKGIDIDAENCAVCIENYKTKDLVRILPCKHIFHR 288
Query: 222 DCIMPWLELHNSCPVCRYEL 241
CI PWL H +CP+C+ ++
Sbjct: 289 LCIDPWLIEHRTCPMCKLDV 308
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 176 AIEALPSIKINEAM---MSSDSSQCAVCKDSFELNEEARQMP-CKHIYHPDCIMPWLELH 231
IE P+ +E + + +CA+C + FE +E R +P C H++HP CI WL+ H
Sbjct: 100 TIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGH 159
Query: 232 NSCPVCRYELPTDDPDYE 249
+CPVCR L P+ E
Sbjct: 160 VTCPVCRTNLAEQTPEPE 177
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 102 LQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGDYFIGPGLEQLIQQLAE 161
LQ Y+ SI F+V ++ A L Y+I Q +
Sbjct: 199 LQKYVSRTSVVFVSISFIVLMIISL--------------AWLVFYYI-----QRFRYANA 239
Query: 162 NDPNRYGTPPASKSAIEALP--SIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIY 219
D N+ A+K AI L +I+ + SD CAVC + ++ N+ R +PC+H++
Sbjct: 240 RDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLF 299
Query: 220 HPDCIMPWLELHNSCPVCRYEL 241
H C+ PWL H +CP+C+ +
Sbjct: 300 HKSCVDPWLLDHRTCPMCKMNI 321
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 175 SAIEALPSI---KINEAMMSSDSSQCAVCKDSFELNEEARQMP-CKHIYHPDCIMPWLEL 230
S +E P+ + + +CA+C + FE +E R +P C H++HP CI WLE
Sbjct: 103 SVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEA 162
Query: 231 HNSCPVCRYEL 241
H +CPVCR L
Sbjct: 163 HVTCPVCRANL 173
>sp|Q84TF5|RHA4A_ARATH RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A
PE=2 SV=1
Length = 174
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 178 EALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMP-CKHIYHPDCIMPWLELHNSCPV 236
+ L + NE + + DS C VC FEL EE +MP CKHI+H DCI WL HN+CP+
Sbjct: 87 DKLHVVLFNEELGTRDS-LCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPL 145
Query: 237 CR 238
CR
Sbjct: 146 CR 147
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 96 FNPFVFLQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGDYFIGPGLEQL 155
P VF+ + NL + + + + + S D A G G A + + LE+
Sbjct: 484 MQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEER 543
Query: 156 IQQLAENDPNR---------YGTPPASKSAIEALPSIKINEAMMSSDSSQCA-VCKDSFE 205
+ Q E PPASK +I+ALP I + E + C +C +
Sbjct: 544 LAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYV 603
Query: 206 LNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYELP 242
E A ++PC H +H C+ WL+ +CPVCR P
Sbjct: 604 KGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 640
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 176 AIEALPSI---KINEAMMSSDSSQCAVCKDSFELNEEARQMP-CKHIYHPDCIMPWLELH 231
AIE P+ ++ + +CAVC FE +E R MP C H++H DC+ WL H
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170
Query: 232 NSCPVCRYELPT----DDPDYEQRRNGNGNGNNNSNNN 265
++CP+CR +L DD D + +G G +S+ +
Sbjct: 171 STCPLCRADLVLNQQGDDDDSTESYSGTDPGTISSSTD 208
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 63/153 (41%), Gaps = 31/153 (20%)
Query: 90 FTDPSEFNPFVFLQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGDYFIG 149
F+ P F V Y+ LR N + NVD ++ G +P N
Sbjct: 34 FSVPICFTFIVLFVLYVIYLRRNSTT---------NVDWSSLGMRGGTFVPTNNNLSTAE 84
Query: 150 PGLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEE 209
GL SK E LP + E+ + DS QC+VC ++ E+
Sbjct: 85 LGL--------------------SKDIREMLPVVIYKESFIVKDS-QCSVCLGDYQAEEK 123
Query: 210 ARQMP-CKHIYHPDCIMPWLELHNSCPVCRYEL 241
+QMP C H +H +CI WL H +CP+CR L
Sbjct: 124 LQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 156
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 165 NRYGTPPASKSAIEALPSIK---INEAMMSSDSSQCAVCKDSFELNEEARQMP-CKHIYH 220
NR S IE P+ + + + ++ +C+VC + FE +E R +P C H++H
Sbjct: 109 NRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFH 168
Query: 221 PDCIMPWLELHNSCPVCRYEL 241
P CI WL H +CP+CR +L
Sbjct: 169 PGCIDAWLRSHTTCPLCRADL 189
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 102 LQNYLQNLRANGASIQFVVENNSNVDPAAGGAGAAFRLPANLGDYFIGPGLEQLIQQLAE 161
LQ Y+ SI F++ ++ A L Y+I Q +
Sbjct: 189 LQKYVSRTSVVFVSISFIILMIISL--------------AWLVFYYI-----QRFRYANA 229
Query: 162 NDPNRYGTPPASKSAIEALP--SIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIY 219
D N+ A+K AI L +I+ + SD CAVC + ++ N+ R +PC+H++
Sbjct: 230 RDRNQRRLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRILPCRHLF 289
Query: 220 HPDCIMPWLELHNSCPVCRYEL 241
H C+ PWL H +CP+C+ +
Sbjct: 290 HKCCVDPWLVDHRTCPMCKMNI 311
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 128 PAAGGAGAAFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINE 187
P A G +F L G+ L L ++L E P +K+ IE LPS + N
Sbjct: 402 PPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGL-----TKADIEQLPSYRFNP 456
Query: 188 AMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCR 238
+ S+ + C VC FE + R +PC H +H C+ WL+ + +CP+CR
Sbjct: 457 SNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 507
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 173 SKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMP-CKHIYHPDCIMPWLELH 231
SK E LP + E+ DS QC+VC ++ N++ +Q+P CKH +H DCI WL H
Sbjct: 77 SKELREMLPIVVFKESFTVMDS-QCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSH 135
Query: 232 NSCPVCRYEL 241
+CP+CR L
Sbjct: 136 TTCPLCRLAL 145
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 128 PAAGGAGAAFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPSIKINE 187
P A G +F L G+ L L ++L E P +K+ IE LPS + N
Sbjct: 399 PPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGL-----TKADIEQLPSYRFNP 453
Query: 188 AMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCR 238
S+ + C VC FE + R +PC H +H C+ WL+ + +CP+CR
Sbjct: 454 NNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 174 KSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMP-CKHIYHPDCIMPWLELHN 232
K+AIE+LP + + S C+VC FE E R +P C+H +H CI WLE H
Sbjct: 100 KTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHA 159
Query: 233 SCPVCRYELPTDDPDYEQRRNGN 255
+CP+CR + ++ D NGN
Sbjct: 160 TCPLCRDRVSMEE-DSSVLTNGN 181
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 173 SKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHN 232
+K+ IE LPS + N S+ + C VC FE+ + R +PC H +H C+ WL+ +
Sbjct: 331 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 390
Query: 233 SCPVCR 238
+CP+CR
Sbjct: 391 TCPICR 396
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 157 QQLAENDPNRYGTPP---ASKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQM 213
Q A P Y TP A ++ I+ LP ++ + D +C +C + F + E R +
Sbjct: 194 QDAATYHPGLYLTPAQTEAVEALIQELPKFRLKA--VPDDCGECLICLEEFHIGHEVRGL 251
Query: 214 PCKHIYHPDCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNS 267
PC H +H +CI WL L+ CP CR + D D N +G + N+
Sbjct: 252 PCAHNFHVECIDQWLRLNVKCPRCRCSV-FPDLDLSALSNLQSSGTEQHSQVNT 304
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 170 PPASKSAIEALPSIKINEAMMSSDSSQCA-VCKDSFELNEEARQMPCKHIYHPDCIMPWL 228
PPASK +I+ALP I + E + C +C + E A ++PC H +H C+ WL
Sbjct: 502 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 561
Query: 229 ELHNSCPVCRYELP 242
+ +CPVCR P
Sbjct: 562 QKSGTCPVCRCMFP 575
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 173 SKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHN 232
+K+ IE LPS + N S+ + C VC FE+ + R +PC H +H C+ WL+ +
Sbjct: 274 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 333
Query: 233 SCPVCR 238
+CP+CR
Sbjct: 334 TCPICR 339
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 173 SKSAIEALPSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHN 232
+K+ IE LPS + N S+ + C VC FE + R +PC H +H C+ WL+ +
Sbjct: 356 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANR 415
Query: 233 SCPVCR 238
+CP+CR
Sbjct: 416 TCPICR 421
>sp|Q9C919|ATL19_ARATH Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana
GN=ATL19 PE=3 SV=1
Length = 178
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 191 SSDSSQCAVCKDSFELNEEARQMP-CKHIYHPDCIMPWLELHNSCPVCRYELP 242
S +S +CA+C + +NEE R P C+HIYH CI WL+ H +CP CR +LP
Sbjct: 124 SLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDLP 176
>sp|Q8L649|BB_ARATH E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1
SV=1
Length = 248
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 173 SKSAIEALPSIKINEAMMSSDS---SQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLE 229
S+ IE LP+ K + S +C +C+ +++ E +PCKH+YH +CI WL
Sbjct: 170 SQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLS 229
Query: 230 LHNSCPVCRYEL 241
++ CPVC E+
Sbjct: 230 INKVCPVCNSEV 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,627,836
Number of Sequences: 539616
Number of extensions: 7745629
Number of successful extensions: 109591
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 551
Number of HSP's that attempted gapping in prelim test: 41185
Number of HSP's gapped (non-prelim): 32325
length of query: 352
length of database: 191,569,459
effective HSP length: 118
effective length of query: 234
effective length of database: 127,894,771
effective search space: 29927376414
effective search space used: 29927376414
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)