BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>018691
MEMEVVMPMPAAAPTSMDFNFDSNCSSPYITAPSSPQRFGNSLFFSAPASPTRISAFYRD
LNDHSLSTSSNRMNSHDTDDDDQDQDQDEDFEFDFSGQLERTSLSADELFDGGKIRPLKL
PAGYESASSTVSSPRQPVSSRSRKYNNHPPRNKDPNPFDGADHQVQHRGRERVTDYSCSS
RKGTRSLSPIRVSDIIDEQEDNSQAARIIITSTRSRSNSNNSKSYASSILSAISFSNKKW
KLKDLLFRSASEGRATSPDPLRKFAVLSKKEVMVDDAKNSSFRSTDSSSGSVSRRRPPVS
AHELHYTANRAVSEELKRKTFLPYKQGLLGCLGFNPGGVHDISRGVGSMPRV

High Scoring Gene Products

Symbol, full name Information P value
AT2G15760 protein from Arabidopsis thaliana 2.6e-49
AR781
AT2G26530
protein from Arabidopsis thaliana 4.0e-26
AT3G62630 protein from Arabidopsis thaliana 9.9e-22
AT3G27880 protein from Arabidopsis thaliana 0.00030
AT1G23710 protein from Arabidopsis thaliana 0.00034

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018691
        (352 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044631 - symbol:AT2G15760 species:3702 "Arabi...   326  2.6e-49   2
TAIR|locus:2066236 - symbol:AR781 "AT2G26530" species:370...   295  4.0e-26   1
TAIR|locus:2081610 - symbol:AT3G62630 "AT3G62630" species...   149  9.9e-22   3
TAIR|locus:2086425 - symbol:AT3G27880 "AT3G27880" species...   112  0.00030   1
TAIR|locus:2034893 - symbol:AT1G23710 "AT1G23710" species...   100  0.00034   2


>TAIR|locus:2044631 [details] [associations]
            symbol:AT2G15760 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005516 "calmodulin binding"
            evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009693 "ethylene biosynthetic process" evidence=RCA]
            GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006248
            EMBL:AC006438 ProtClustDB:CLSN2714519 InterPro:IPR012442
            Pfam:PF07816 EMBL:AF345343 EMBL:AY088268 EMBL:BT026445
            IPI:IPI00519889 PIR:A84533 RefSeq:NP_565379.1 UniGene:At.13860
            STRING:Q9ZQD8 EnsemblPlants:AT2G15760.1 GeneID:816070
            KEGG:ath:AT2G15760 TAIR:At2g15760 eggNOG:NOG292804
            HOGENOM:HOG000114711 InParanoid:Q9ZQD8 OMA:NFSGQLE PhylomeDB:Q9ZQD8
            ArrayExpress:Q9ZQD8 Genevestigator:Q9ZQD8 Uniprot:Q9ZQD8
        Length = 315

 Score = 326 (119.8 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
 Identities = 85/210 (40%), Positives = 114/210 (54%)

Query:   150 PRNKDPNPFDGADHQVQHRGRERVTDYSCS--SRKGTRSLSPIRVSDIIDEQEDNSQXXX 207
             PR++     + +D Q + RGR+R    S S   RKG+RS+SP+RVSDI+ ++E+  Q   
Sbjct:   114 PRSRGLE-IEDSDDQ-KDRGRDRSPGSSSSRYDRKGSRSMSPLRVSDIMVDEEEEVQSTK 171

Query:   208 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKWKLKDLL-FRSASEGRAT-SPDPLRKFA 265
                                           KKWKLKDLL FRSAS+GR   + + L ++ 
Sbjct:   172 MVASNTSNQKSSVFLSAILFPGRAY-----KKWKLKDLLLFRSASDGRPIPTKESLNRYD 226

Query:   266 VLSKKEVMVDDAKNXXXXXXXXXXXXXXXXX----XXXXAHELHYTANRAVSEELKRKTF 321
             +L+KK+   ++ +N                         AHE+HYT NRAVSEELKRKTF
Sbjct:   227 ILTKKDA--EEVRNSSIRSRESCESSVSRSRRRNGAVVSAHEMHYTENRAVSEELKRKTF 284

Query:   322 LPYKQGLLGCLGFNPGGVHDISRGVGSMPR 351
             LPYKQG LGCLGFNP  V++I+R VGS+ R
Sbjct:   285 LPYKQGWLGCLGFNPA-VNEIAR-VGSLSR 312

 Score = 205 (77.2 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
 Identities = 58/120 (48%), Positives = 64/120 (53%)

Query:     7 MPMPAAAPTSMDFNFDSNCSSPYITAPSSPQRFGNSLFFSAPASPTRISAFYRDLNDHSL 66
             M +  A   + + NFDS  SSPYITAPSSP RFGN+ FFSAP SP             S 
Sbjct:     1 MEIEVAEAAAAELNFDSTTSSPYITAPSSPTRFGNN-FFSAPTSP-------------SP 46

Query:    67 STSSNRMNSHD----TXXXXXXXXXXXXXXXXXSGQLERTSLSA-DELFDGGKIRPLKLP 121
             STSSN     D    T                 SGQLE+TS SA DELFDGGKIRPL+ P
Sbjct:    47 STSSNIPFDWDDQPRTPKKRSAIGFEDDFEFNFSGQLEKTSFSAADELFDGGKIRPLRTP 106


>TAIR|locus:2066236 [details] [associations]
            symbol:AR781 "AT2G26530" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
            "response to mechanical stimulus" evidence=RCA] [GO:0009646
            "response to absence of light" evidence=RCA] [GO:0009863 "salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009867
            "jasmonic acid mediated signaling pathway" evidence=RCA]
            [GO:0010200 "response to chitin" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            GO:GO:0005886 EMBL:CP002685 EMBL:AC002505 EMBL:AY150396
            IPI:IPI00537082 PIR:T00986 RefSeq:NP_180221.1 UniGene:At.343
            STRING:O48720 PaxDb:O48720 PRIDE:O48720 EnsemblPlants:AT2G26530.1
            GeneID:817194 KEGG:ath:AT2G26530 TAIR:At2g26530 eggNOG:NOG284000
            InParanoid:O48720 OMA:ENTRKRT PhylomeDB:O48720
            ProtClustDB:CLSN2714519 Genevestigator:O48720 InterPro:IPR012442
            Pfam:PF07816 Uniprot:O48720
        Length = 317

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 101/319 (31%), Positives = 137/319 (42%)

Query:    30 ITAPSSPQRFGNSLFFSAPASPTRISAFYRDLNDHSLSTSSNRMNS----HDTXXX---- 81
             +TAPSSP++  +  F SAP SP R + FYR+  + +    S+R+       +T       
Sbjct:     6 LTAPSSPRQL-SGCFLSAPTSPRRFNEFYREFEEAATRNFSDRLTVPFDWEETPGTPRKI 64

Query:    82 XXXXXXXXXXXXXXSGQLERTSLSADELFDGGKIRPLKLPA----GYESAXXXXXXXXXX 137
                            G+LE TSL A+ELFDGGKI+PLK P      +             
Sbjct:    65 TNDDDDDIDFAFEIGGKLETTSLFAEELFDGGKIKPLKPPPYLQLDHHHQPQILSPRSPR 124

Query:   138 XXXXXXKY---NNHPPRNKDPN--PFDGADHQVQHR-GRERVTDYSCSS-RKGTRSLSPI 190
                   K        PR K  N  PF+ A  + ++  G ER      +S R+  RSLSP 
Sbjct:   125 SPIAHGKNIIRKAFSPRKKPDNVDPFEVAMDKARNGLGEERGRGRRQNSGRRVARSLSPF 184

Query:   191 RVSDII-DEQEDNSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKWKLKD-LLFR 248
             RVS    +EQE   +                                 KKW+LKD LLFR
Sbjct:   185 RVSAYPWEEQEQEQEQEQRDVQEQRKGTLSSIPSTSSSACVSCKSSSSKKWRLKDFLLFR 244

Query:   249 SASEGRAT-SPDPLRKFAVLSKKEVMVDDAKNXXXXXXXXXXXXXXXXXXXXXAHELHYT 307
             SASEGRA  + D ++ F  L +K+   +D KN                     AHE HY 
Sbjct:   245 SASEGRARHNKDSVKTFTSLFRKQ---EDTKNSSSRGRGSSSVS---------AHEFHYM 292

Query:   308 ANRAVSEELKRKTFLPYKQ 326
             + +A +++LK+KTFLPY Q
Sbjct:   293 SKKAETKDLKKKTFLPYMQ 311


>TAIR|locus:2081610 [details] [associations]
            symbol:AT3G62630 "AT3G62630" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AL162651 InterPro:IPR012442
            Pfam:PF07816 EMBL:BT003818 EMBL:BT005136 IPI:IPI00541600 PIR:T48052
            RefSeq:NP_191822.1 UniGene:At.20882 PRIDE:Q9LZK2
            EnsemblPlants:AT3G62630.1 GeneID:825437 KEGG:ath:AT3G62630
            TAIR:At3g62630 InParanoid:Q9LZK2 OMA:EREVKEC PhylomeDB:Q9LZK2
            ProtClustDB:CLSN2719766 ArrayExpress:Q9LZK2 Genevestigator:Q9LZK2
            Uniprot:Q9LZK2
        Length = 380

 Score = 149 (57.5 bits), Expect = 9.9e-22, Sum P(3) = 9.9e-22
 Identities = 25/38 (65%), Positives = 32/38 (84%)

Query:   301 AHELHYTANRAVSEELKRKTFLPYKQGLLGCLGFNPGG 338
             AHELHYT NRA +EE+K++T+LPY+ GL GCLGF+  G
Sbjct:   326 AHELHYTTNRAQAEEMKKRTYLPYRHGLFGCLGFSSKG 363

 Score = 139 (54.0 bits), Expect = 9.9e-22, Sum P(3) = 9.9e-22
 Identities = 41/107 (38%), Positives = 53/107 (49%)

Query:    16 SMDFNFDSNCSSPYITAPSSPQRFGN-SLFFSAPASPTRISAFYRDLNDHSLSTSSNRMN 74
             S DF   S CS+P+++APSSP R      FFSAP+SP     F+      S S+SS    
Sbjct:    18 SDDFGSGSACSTPFVSAPSSPGRGPPPGYFFSAPSSPMH---FFLC----SASSSSENPK 70

Query:    75 SHDTXXXXXXXXXXXXXXXXXSGQLERTSL-SADELFDGGKIRPLKL 120
               DT                 SG L   S+ SA+ELF  G+I+P+KL
Sbjct:    71 KLDTSSCGDFEFDFSSRLSSSSGPLGGVSMTSAEELFSNGQIKPMKL 117

 Score = 60 (26.2 bits), Expect = 9.9e-22, Sum P(3) = 9.9e-22
 Identities = 14/23 (60%), Positives = 15/23 (65%)

Query:   238 KKWK-LKDLLFRSASEGRATSPD 259
             KKW  LKDLL RS SEGR    +
Sbjct:   233 KKWIFLKDLLHRSKSEGRGNGKE 255


>TAIR|locus:2086425 [details] [associations]
            symbol:AT3G27880 "AT3G27880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000371
            InterPro:IPR012442 Pfam:PF07816 HOGENOM:HOG000142253 EMBL:AY085466
            EMBL:BT026416 EMBL:AK226829 IPI:IPI00518663 RefSeq:NP_566827.1
            UniGene:At.42887 DNASU:822408 EnsemblPlants:AT3G27880.1
            GeneID:822408 KEGG:ath:AT3G27880 TAIR:At3g27880 eggNOG:NOG304058
            InParanoid:Q9LK89 OMA:WRRISDR PhylomeDB:Q9LK89
            ProtClustDB:CLSN2917302 Genevestigator:Q9LK89 Uniprot:Q9LK89
        Length = 242

 Score = 112 (44.5 bits), Expect = 0.00030, P = 0.00030
 Identities = 31/93 (33%), Positives = 47/93 (50%)

Query:   238 KKWKLKDLLFRSASEGRATSPDPLRKFAVLSKKEVMVDDAKNXXXXXXXXXXXXXXXXXX 297
             K+W+L+D L RS S+G+ +      KF   + ++   DD ++                  
Sbjct:   150 KRWRLRDFLKRSKSDGKQSL-----KFLNPTNRD---DDDESSKSKKKVSVSVTVS---- 197

Query:   298 XXXAHELHYTANRAVSEELKRKTFLPYKQGLLG 330
                AHE  Y  N+A+ EE KRK++LPYKQ L+G
Sbjct:   198 ---AHEKFYLRNKAIKEEDKRKSYLPYKQDLVG 227


>TAIR|locus:2034893 [details] [associations]
            symbol:AT1G23710 "AT1G23710" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0002679 "respiratory burst involved in defense
            response" evidence=RCA] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009612 "response to mechanical stimulus"
            evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
            evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
            [GO:0010286 "heat acclimation" evidence=RCA] [GO:0035556
            "intracellular signal transduction" evidence=RCA] EMBL:CP002684
            EMBL:AC005990 InterPro:IPR012442 Pfam:PF07816
            ProtClustDB:CLSN2687929 EMBL:AF325099 EMBL:BT005865 EMBL:AK228261
            IPI:IPI00533155 PIR:B86371 RefSeq:NP_564201.1 UniGene:At.10942
            STRING:Q9ZUC4 PRIDE:Q9ZUC4 EnsemblPlants:AT1G23710.1 GeneID:838981
            KEGG:ath:AT1G23710 TAIR:At1g23710 InParanoid:Q9ZUC4 OMA:EEFSFAC
            PhylomeDB:Q9ZUC4 Genevestigator:Q9ZUC4 Uniprot:Q9ZUC4
        Length = 295

 Score = 100 (40.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 34/122 (27%), Positives = 50/122 (40%)

Query:   238 KKWKLKDLLFRSASEGRAT------SPDPLRKFAVLSKKEVMVDD-------AKNXXXXX 284
             K W+ +DL+ RS S+GR        S D  R  +  S      ++        K      
Sbjct:   177 KLWRFRDLVLRSNSDGRDAFVFLNNSNDKTRTRSSSSSSSTAAEENDKKVITEKKKGKEK 236

Query:   285 XXXXXXXXXXXXXXXXAHELHYTANRAVSEELKRKTFLPYKQGLLGCLGFNPGGVHDISR 344
                             AHE  Y  NRA+ EE+K +++LPYKQ     +GF    V+ +SR
Sbjct:   237 TSTSSETKKKTTTTKSAHEKLYMRNRAMKEEVKHRSYLPYKQ-----VGFFTN-VNGLSR 290

Query:   345 GV 346
              +
Sbjct:   291 NI 292

 Score = 51 (23.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 9/19 (47%), Positives = 15/19 (78%)

Query:   100 ERTSLSADELFDGGKIRPL 118
             E + ++ADE F+ G+IRP+
Sbjct:    73 EGSPITADEAFEDGQIRPV 91


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      352       265   0.00093  114 3  11 23  0.39    34
                                                     32  0.50    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  195 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.87u 0.11s 18.98t   Elapsed:  00:00:01
  Total cpu time:  18.87u 0.11s 18.98t   Elapsed:  00:00:01
  Start:  Thu May  9 22:03:47 2013   End:  Thu May  9 22:03:48 2013

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