Query 018691
Match_columns 352
No_of_seqs 129 out of 141
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 04:34:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018691.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018691hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fu9a_ g.37.1.2 (A:) U-shaped 7.4 39 0.0028 21.5 -0.2 12 299-310 24-35 (36)
2 d1d2sa_ b.29.1.4 (A:) Sex horm 4.6 1.5E+02 0.011 22.4 1.9 16 319-334 134-149 (170)
3 d1pqwa_ c.2.1.1 (A:) Putative 4.2 96 0.007 23.4 0.3 13 106-118 168-180 (183)
4 d1f16a_ f.1.4.1 (A:) Proapopto 3.4 1.4E+02 0.011 24.2 0.7 10 106-115 96-105 (192)
5 d2baia1 g.87.1.1 (A:1-32) Poly 3.3 1.6E+02 0.011 17.7 0.6 15 314-328 17-31 (32)
6 d1k3ka_ f.1.4.1 (A:) Bcl-2 hom 3.1 1.6E+02 0.012 23.1 0.7 10 106-115 73-82 (146)
7 d1dvoa_ a.136.1.1 (A:) Repress 2.4 2.3E+02 0.017 22.4 0.8 13 108-120 54-66 (152)
8 d1k0ga_ d.161.1.1 (A:) P-amino 2.3 2.7E+02 0.02 24.8 1.2 18 319-336 97-114 (453)
9 d1zy3a1 f.1.4.1 (A:1-170) Apop 2.3 2.3E+02 0.016 22.4 0.6 9 106-115 82-90 (170)
10 d1tjca_ a.118.8.1 (A:) Prolyl 2.3 1.1E+02 0.0082 20.7 -1.2 13 103-115 2-14 (95)
No 1
>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=7.36 E-value=39 Score=21.46 Aligned_cols=12 Identities=33% Similarity=0.504 Sum_probs=8.8
Q ss_pred Cccchhhhhhhh
Q 018691 299 VSAHELHYTANR 310 (352)
Q Consensus 299 ~SAHE~~Y~~nr 310 (352)
.-||++||+.+|
T Consensus 24 ~~aHKk~YCss~ 35 (36)
T d1fu9a_ 24 YLAHKQFYCKNK 35 (36)
T ss_dssp HHHHHHHTSCCC
T ss_pred HHHHHHhcccCC
Confidence 458888888764
No 2
>d1d2sa_ b.29.1.4 (A:) Sex hormone-binding globulin {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.58 E-value=1.5e+02 Score=22.38 Aligned_cols=16 Identities=38% Similarity=0.509 Sum_probs=12.6
Q ss_pred ccCCCccCCceeeeec
Q 018691 319 KTFLPYKQGLLGCLGF 334 (352)
Q Consensus 319 rTfLPYRQgLlGc~~~ 334 (352)
...+++.+++.||++.
T Consensus 134 ~~~~~~~~~F~GCir~ 149 (170)
T d1d2sa_ 134 NLRLPLVPALDGCLRR 149 (170)
T ss_dssp GSSSCCCCCCCEEEEE
T ss_pred cccCcCCCCeEEEECc
Confidence 4456788999999964
No 3
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.21 E-value=96 Score=23.44 Aligned_cols=13 Identities=23% Similarity=0.261 Sum_probs=10.9
Q ss_pred hhhhccCCceecC
Q 018691 106 ADELFDGGKIRPL 118 (352)
Q Consensus 106 AdELF~~G~IrPl 118 (352)
.-+|+.+|+|+|+
T Consensus 168 v~~~i~~G~i~p~ 180 (183)
T d1pqwa_ 168 ILQHVADGKLEVL 180 (183)
T ss_dssp HHHHHHTTSSCCC
T ss_pred HHHHHHCCCCcee
Confidence 4468999999987
No 4
>d1f16a_ f.1.4.1 (A:) Proapoptotic molecule Bax {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.38 E-value=1.4e+02 Score=24.22 Aligned_cols=10 Identities=30% Similarity=0.787 Sum_probs=8.8
Q ss_pred hhhhccCCce
Q 018691 106 ADELFDGGKI 115 (352)
Q Consensus 106 AdELF~~G~I 115 (352)
|+|||.+|.|
T Consensus 96 a~elF~dG~i 105 (192)
T d1f16a_ 96 AADMFSDGNF 105 (192)
T ss_dssp HHHHTSSSSC
T ss_pred HHHHHhcCCC
Confidence 8999999875
No 5
>d2baia1 g.87.1.1 (A:1-32) Polyprotein leader polypeptide {Mengo encephalomyocarditis virus [TaxId: 12107]}
Probab=3.30 E-value=1.6e+02 Score=17.66 Aligned_cols=15 Identities=33% Similarity=0.618 Sum_probs=11.5
Q ss_pred hhhhcccCCCccCCc
Q 018691 314 EELKRKTFLPYKQGL 328 (352)
Q Consensus 314 ee~rRrTfLPYRQgL 328 (352)
||..+-+-|.||.|+
T Consensus 17 eecpkcsalqyrngf 31 (32)
T d2baia1 17 EECPKCSALQYRNGF 31 (32)
T ss_dssp GGHHHHHCSSSTTCC
T ss_pred hhCcchhHHHhhccC
Confidence 556677889999875
No 6
>d1k3ka_ f.1.4.1 (A:) Bcl-2 homolog {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=3.14 E-value=1.6e+02 Score=23.08 Aligned_cols=10 Identities=10% Similarity=0.205 Sum_probs=8.8
Q ss_pred hhhhccCCce
Q 018691 106 ADELFDGGKI 115 (352)
Q Consensus 106 AdELF~~G~I 115 (352)
|+|||.+|.|
T Consensus 73 ~~elF~DG~~ 82 (146)
T d1k3ka_ 73 MLQVSGDGNM 82 (146)
T ss_dssp HHHHCSSCSC
T ss_pred HHHHHcCCCC
Confidence 8999999875
No 7
>d1dvoa_ a.136.1.1 (A:) Repressor of bacterial conjugation FinO {Escherichia coli [TaxId: 562]}
Probab=2.42 E-value=2.3e+02 Score=22.41 Aligned_cols=13 Identities=46% Similarity=0.606 Sum_probs=10.6
Q ss_pred hhccCCceecCCC
Q 018691 108 ELFDGGKIRPLKL 120 (352)
Q Consensus 108 ELF~~G~IrPl~~ 120 (352)
+||.++.++||+.
T Consensus 54 ~~F~~~~~kPLki 66 (152)
T d1dvoa_ 54 GLFDGDTPRLLAC 66 (152)
T ss_dssp GGEETTEECCBCT
T ss_pred HhcCCCCCCCccc
Confidence 6898888988873
No 8
>d1k0ga_ d.161.1.1 (A:) P-aminobenzoate synthase component I {Escherichia coli [TaxId: 562]}
Probab=2.30 E-value=2.7e+02 Score=24.77 Aligned_cols=18 Identities=33% Similarity=0.768 Sum_probs=14.6
Q ss_pred ccCCCccCCceeeeecCC
Q 018691 319 KTFLPYKQGLLGCLGFNP 336 (352)
Q Consensus 319 rTfLPYRQgLlGc~~~~~ 336 (352)
-.-|||.-|+||+|++--
T Consensus 97 ~~~lPF~GG~vGy~sYE~ 114 (453)
T d1k0ga_ 97 NEDLPFQGGALGLFGYDL 114 (453)
T ss_dssp CTTCSCCSEEEEEECGGG
T ss_pred cCCCCccccEEEEEeeee
Confidence 346899999999999854
No 9
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.28 E-value=2.3e+02 Score=22.42 Aligned_cols=9 Identities=67% Similarity=1.180 Sum_probs=0.0
Q ss_pred hhhhccCCce
Q 018691 106 ADELFDGGKI 115 (352)
Q Consensus 106 AdELF~~G~I 115 (352)
|+|||.+| |
T Consensus 82 a~elF~dg-i 90 (170)
T d1zy3a1 82 SDELFQGG-P 90 (170)
T ss_dssp HHHHHTTC-C
T ss_pred HHHHhcCC-C
No 10
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.25 E-value=1.1e+02 Score=20.73 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=0.0
Q ss_pred cCchhhhccCCce
Q 018691 103 SLSADELFDGGKI 115 (352)
Q Consensus 103 ~~sAdELF~~G~I 115 (352)
.+|||+.|.=|+|
T Consensus 2 ~Lsaddc~~lG~~ 14 (95)
T d1tjca_ 2 FLTAEDSFELGKV 14 (95)
T ss_dssp CCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHH
Done!