Query 018696
Match_columns 351
No_of_seqs 152 out of 1703
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 04:39:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ljs_A Fructokinase; fructokia 100.0 2E-53 6.9E-58 391.0 27.1 314 27-349 3-330 (338)
2 3pl2_A Sugar kinase, ribokinas 100.0 3.5E-52 1.2E-56 379.8 30.7 310 27-347 7-317 (319)
3 3iq0_A Putative ribokinase II; 100.0 4.6E-51 1.6E-55 374.0 31.6 311 28-349 3-314 (330)
4 2qcv_A Putative 5-dehydro-2-de 100.0 3.1E-50 1.1E-54 368.9 37.0 316 27-349 10-327 (332)
5 4du5_A PFKB; structural genomi 100.0 5.7E-51 1.9E-55 374.1 30.2 313 16-344 19-334 (336)
6 3hj6_A Fructokinase, FRK; fruc 100.0 5.2E-52 1.8E-56 379.8 19.8 307 27-346 20-326 (327)
7 2v78_A Fructokinase; transfera 100.0 1.9E-49 6.6E-54 360.7 31.1 306 29-349 2-312 (313)
8 3ktn_A Carbohydrate kinase, PF 100.0 7.9E-49 2.7E-53 361.6 33.3 311 29-349 3-333 (346)
9 1v1a_A 2-keto-3-deoxygluconate 100.0 8.1E-49 2.8E-53 356.0 32.3 301 29-348 2-304 (309)
10 1tyy_A Putative sugar kinase; 100.0 8.6E-50 2.9E-54 366.6 25.1 302 29-349 25-331 (339)
11 2dcn_A Hypothetical fructokina 100.0 1.7E-48 5.7E-53 354.2 31.2 304 29-349 2-310 (311)
12 3h49_A Ribokinase; transferase 100.0 1.2E-48 4E-53 357.3 29.0 307 27-349 4-316 (325)
13 3ewm_A Uncharacterized sugar k 100.0 1.6E-47 5.5E-52 348.0 30.4 298 29-349 2-302 (313)
14 3ry7_A Ribokinase; transferase 100.0 5E-48 1.7E-52 350.0 26.7 292 29-344 3-304 (304)
15 2rbc_A Sugar kinase, AGR_C_456 100.0 1.7E-47 5.8E-52 351.7 29.1 294 27-348 28-329 (343)
16 4e3a_A Sugar kinase protein; s 100.0 1.8E-47 6.3E-52 352.7 29.1 300 27-343 24-348 (352)
17 1rkd_A Ribokinase; carbohydrat 100.0 4.4E-47 1.5E-51 344.5 30.1 296 28-347 4-307 (309)
18 3go6_A Ribokinase RBSK; phosph 100.0 6E-47 2.1E-51 343.4 30.1 280 28-349 19-306 (310)
19 3kzh_A Probable sugar kinase; 100.0 2.1E-47 7.1E-52 349.5 26.1 301 26-349 4-311 (328)
20 4gm6_A PFKB family carbohydrat 100.0 1.4E-46 4.9E-51 347.1 31.3 311 28-348 24-345 (351)
21 4e69_A 2-dehydro-3-deoxyglucon 100.0 2E-46 6.9E-51 342.7 31.3 290 27-333 22-317 (328)
22 3vas_A Putative adenosine kina 100.0 1.5E-47 5.2E-52 355.6 23.9 315 4-342 6-365 (370)
23 3ikh_A Carbohydrate kinase; tr 100.0 3.6E-47 1.2E-51 343.4 24.7 281 28-349 2-290 (299)
24 2c4e_A Sugar kinase MJ0406; tr 100.0 8.3E-47 2.9E-51 341.6 26.2 290 29-348 6-300 (302)
25 3lhx_A Ketodeoxygluconokinase; 100.0 1.1E-46 3.8E-51 343.4 27.1 287 29-333 5-304 (319)
26 2fv7_A Ribokinase; structural 100.0 4E-46 1.4E-50 341.3 26.3 294 27-343 23-328 (331)
27 1vm7_A Ribokinase; TM0960, str 100.0 2E-45 6.9E-50 333.7 29.5 290 29-348 15-311 (311)
28 3b1n_A Ribokinase, putative; r 100.0 3.5E-45 1.2E-49 334.2 27.9 290 29-348 1-306 (326)
29 2nwh_A AGR_C_3442P, carbohydra 100.0 1.9E-45 6.6E-50 334.8 25.8 297 29-348 4-308 (317)
30 2pkf_A Adenosine kinase; trans 100.0 2.9E-45 9.9E-50 335.9 27.1 293 28-348 10-320 (334)
31 2afb_A 2-keto-3-deoxygluconate 100.0 5.7E-44 1.9E-48 329.7 33.9 310 27-347 11-343 (351)
32 3otx_A Adenosine kinase, putat 100.0 2E-44 6.9E-49 332.2 26.3 289 27-332 6-338 (347)
33 2qhp_A Fructokinase; NP_810670 100.0 4E-44 1.4E-48 323.2 26.6 280 29-335 4-287 (296)
34 3ie7_A LIN2199 protein; phosph 100.0 1.8E-43 6.2E-48 322.3 31.0 290 29-349 3-305 (320)
35 3loo_A Anopheles gambiae adeno 100.0 3.6E-45 1.2E-49 339.2 19.9 289 27-332 22-354 (365)
36 3umo_A 6-phosphofructokinase i 100.0 2.1E-43 7.1E-48 320.4 29.5 292 29-349 3-308 (309)
37 2jg1_A Tagatose-6-phosphate ki 100.0 1.7E-43 5.7E-48 323.7 27.7 292 28-349 20-326 (330)
38 2f02_A Tagatose-6-phosphate ki 100.0 7.3E-43 2.5E-47 318.6 28.5 291 29-349 3-309 (323)
39 3bf5_A Ribokinase related prot 100.0 9.9E-44 3.4E-48 321.7 20.6 278 27-348 19-301 (306)
40 3cqd_A 6-phosphofructokinase i 100.0 1.8E-42 6E-47 314.3 27.4 289 31-349 4-308 (309)
41 2ajr_A Sugar kinase, PFKB fami 100.0 3.9E-43 1.3E-47 321.4 23.1 294 27-349 11-326 (331)
42 4e84_A D-beta-D-heptose 7-phos 100.0 3.3E-43 1.1E-47 324.0 22.2 288 27-342 52-351 (352)
43 3uq6_A Adenosine kinase, putat 100.0 5.8E-43 2E-47 325.1 24.0 301 28-346 26-371 (372)
44 1bx4_A Protein (adenosine kina 100.0 6.2E-43 2.1E-47 322.1 23.8 289 27-332 5-337 (345)
45 2abq_A Fructose 1-phosphate ki 100.0 5.3E-42 1.8E-46 310.6 27.5 288 29-349 1-299 (306)
46 2hlz_A Ketohexokinase; non-pro 100.0 6.4E-42 2.2E-46 310.8 27.7 279 25-332 14-309 (312)
47 3kd6_A Carbohydrate kinase, PF 100.0 1.6E-42 5.4E-47 315.0 23.0 292 29-349 3-299 (313)
48 2abs_A Adenosine kinase, AK; r 100.0 3.5E-42 1.2E-46 321.2 24.7 291 25-332 29-375 (383)
49 2jg5_A Fructose 1-phosphate ki 100.0 1.8E-41 6.3E-46 307.1 27.9 288 29-349 1-299 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 2.7E-38 9.4E-43 285.1 16.0 269 30-341 13-292 (298)
51 2ddm_A Pyridoxine kinase; pyri 99.9 5.7E-25 1.9E-29 196.5 14.2 226 74-329 19-267 (283)
52 2yxt_A Pyridoxal kinase; beta 99.9 2.5E-25 8.5E-30 201.6 10.7 219 77-328 12-269 (312)
53 1jxh_A Phosphomethylpyrimidine 99.9 2.1E-22 7E-27 180.2 13.3 161 155-329 95-269 (288)
54 2i5b_A Phosphomethylpyrimidine 99.9 7.3E-21 2.5E-25 168.7 16.6 164 154-329 74-250 (271)
55 1ub0_A THID, phosphomethylpyri 99.9 1.6E-20 5.5E-25 165.3 17.8 162 154-329 70-244 (258)
56 3mbh_A Putative phosphomethylp 99.8 1.6E-19 5.5E-24 161.3 15.6 166 154-329 77-259 (291)
57 3pzs_A PM kinase, pyridoxamine 99.8 4.2E-19 1.4E-23 158.7 16.5 165 153-328 76-259 (289)
58 3h74_A Pyridoxal kinase; PSI-I 99.8 5.8E-19 2E-23 156.9 16.3 163 154-328 74-248 (282)
59 3zs7_A Pyridoxal kinase; trans 99.8 6.1E-18 2.1E-22 151.6 14.9 165 153-329 75-262 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.6 1.7E-14 5.9E-19 127.3 15.9 164 150-327 54-234 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.6 1.1E-14 3.8E-19 140.8 14.7 162 154-327 91-274 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.2 8.8E-11 3E-15 102.9 12.4 156 150-320 52-219 (265)
63 3bgk_A SMU.573, putative uncha 99.1 9E-10 3.1E-14 98.5 13.8 172 151-346 122-303 (311)
64 2r3b_A YJEF-related protein; p 99.1 2.2E-09 7.4E-14 96.0 14.1 169 151-345 108-285 (310)
65 3dzv_A 4-methyl-5-(beta-hydrox 99.0 1.8E-08 6.2E-13 87.9 17.7 159 149-321 53-229 (273)
66 3rpz_A ADP/ATP-dependent NAD(P 98.7 1E-07 3.6E-12 83.6 13.0 170 152-346 96-272 (279)
67 3drw_A ADP-specific phosphofru 98.7 5.1E-07 1.8E-11 84.0 17.1 167 57-232 113-319 (474)
68 3rss_A Putative uncharacterize 98.7 1.1E-07 3.6E-12 90.4 12.7 173 150-345 316-493 (502)
69 1ua4_A Glucokinase, ADP-depend 98.5 4.8E-07 1.7E-11 84.3 11.3 163 58-231 108-301 (455)
70 3nl6_A Thiamine biosynthetic b 98.4 1.9E-05 6.4E-10 75.6 18.3 156 150-321 301-495 (540)
71 3hpd_A Hydroxyethylthiazole ki 98.3 3.7E-05 1.3E-09 66.5 15.8 155 151-320 53-219 (265)
72 1l2l_A ADP-dependent glucokina 98.2 1.2E-05 4.2E-10 74.7 11.2 160 59-229 112-302 (457)
73 1gc5_A ADP-dependent glucokina 98.1 4.9E-05 1.7E-09 70.8 13.7 161 59-229 117-312 (467)
74 3k5w_A Carbohydrate kinase; 11 97.3 0.0013 4.4E-08 61.9 11.1 168 153-347 291-466 (475)
75 2gk4_A Conserved hypothetical 65.0 6.6 0.00022 32.8 4.3 50 28-84 3-52 (232)
76 3tjr_A Short chain dehydrogena 55.5 22 0.00077 30.6 6.3 41 60-102 40-80 (301)
77 1u7z_A Coenzyme A biosynthesis 50.9 15 0.00053 30.4 4.2 48 28-82 8-55 (226)
78 3rp8_A Flavoprotein monooxygen 48.0 15 0.0005 33.2 3.9 23 61-83 32-54 (407)
79 3i3l_A Alkylhalidase CMLS; fla 47.8 15 0.00052 35.3 4.2 41 61-102 32-79 (591)
80 3r1i_A Short-chain type dehydr 38.1 81 0.0028 26.5 7.0 41 60-102 41-81 (276)
81 1jzt_A Hypothetical 27.5 kDa p 32.9 51 0.0017 27.6 4.7 43 60-103 70-115 (246)
82 2o8n_A APOA-I binding protein; 32.8 50 0.0017 28.0 4.6 42 61-103 92-135 (265)
83 2re2_A Uncharacterized protein 29.3 26 0.00089 26.3 2.0 38 61-104 65-102 (136)
84 3u3c_B Paxillin LD2 peptide; 4 28.7 18 0.00063 17.8 0.7 8 3-10 17-24 (26)
85 3itj_A Thioredoxin reductase 1 28.6 40 0.0014 28.9 3.5 24 60-83 30-53 (338)
86 3k31_A Enoyl-(acyl-carrier-pro 26.6 1.5E+02 0.005 25.1 6.7 36 62-99 43-78 (296)
87 4at0_A 3-ketosteroid-delta4-5a 26.4 59 0.002 30.3 4.4 24 60-83 49-72 (510)
88 3e8x_A Putative NAD-dependent 26.3 64 0.0022 26.1 4.2 24 60-83 30-53 (236)
89 2i0z_A NAD(FAD)-utilizing dehy 25.2 62 0.0021 29.5 4.2 24 60-83 34-57 (447)
90 3tz6_A Aspartate-semialdehyde 24.7 2.1E+02 0.0072 25.2 7.4 94 75-194 1-95 (344)
91 1vl8_A Gluconate 5-dehydrogena 24.1 1.3E+02 0.0044 25.0 5.8 24 60-83 30-53 (267)
92 2wfb_A Putative uncharacterize 24.1 35 0.0012 24.7 1.9 40 60-104 52-91 (120)
93 4iin_A 3-ketoacyl-acyl carrier 23.4 63 0.0022 27.0 3.7 43 60-103 38-80 (271)
94 3can_A Pyruvate-formate lyase- 23.3 2.5E+02 0.0086 21.4 9.9 72 172-252 19-95 (182)
95 3osu_A 3-oxoacyl-[acyl-carrier 22.8 68 0.0023 26.3 3.7 43 60-103 13-55 (246)
96 1ryi_A Glycine oxidase; flavop 22.4 68 0.0023 28.1 3.8 24 60-83 25-48 (382)
97 3iwt_A 178AA long hypothetical 22.1 55 0.0019 25.6 2.8 36 76-112 16-64 (178)
98 1mkz_A Molybdenum cofactor bio 22.0 1.4E+02 0.0048 23.1 5.2 35 63-99 29-63 (172)
99 3lyl_A 3-oxoacyl-(acyl-carrier 21.7 90 0.0031 25.4 4.2 42 60-103 14-55 (247)
100 2dha_A FLJ20171 protein; RRM d 21.7 1.2E+02 0.0042 22.0 4.5 45 58-102 5-49 (123)
101 3ucx_A Short chain dehydrogena 21.6 1.1E+02 0.0039 25.3 4.9 41 60-102 20-60 (264)
102 3f8d_A Thioredoxin reductase ( 21.6 83 0.0028 26.5 4.2 24 60-83 23-46 (323)
103 1ztd_A Hypothetical protein PF 21.5 85 0.0029 22.5 3.3 32 280-317 63-94 (133)
104 2hq1_A Glucose/ribitol dehydro 21.5 1.2E+02 0.0041 24.5 5.0 41 60-101 14-54 (247)
105 1rdu_A Conserved hypothetical 20.7 31 0.001 24.9 0.9 39 61-104 48-86 (116)
106 3cty_A Thioredoxin reductase; 20.5 79 0.0027 26.9 3.8 23 61-83 25-47 (319)
107 3pwk_A Aspartate-semialdehyde 20.4 2.6E+02 0.0088 24.8 7.1 93 76-194 3-96 (366)
108 2iuy_A Avigt4, glycosyltransfe 20.2 1.4E+02 0.0047 25.5 5.4 75 27-107 2-90 (342)
109 3qfa_A Thioredoxin reductase 1 20.1 1.1E+02 0.0037 28.6 4.8 44 7-81 18-61 (519)
No 1
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=2e-53 Score=390.97 Aligned_cols=314 Identities=37% Similarity=0.606 Sum_probs=268.9
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
++++|+++|++++|++...+..|.. +..+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||++++
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~ 81 (338)
T 3ljs_A 3 LKKTILCFGEALIDMLAQPLVKKGM-PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDG 81 (338)
T ss_dssp -CCEEEEESCCEEEEEECCCSSTTS-CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTCBCTT
T ss_pred CCCCEEEEChhhhheeccCCCCccc-hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCCCcee
Confidence 4678999999999999988776543 667889999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
+.+.++.+|+.+++.++.+|++++.+++.++++..++++++....+++++++|++++.+..+...+.+.++++.+++.+.
T Consensus 82 v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~ 161 (338)
T 3ljs_A 82 IVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGA 161 (338)
T ss_dssp CEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCC
Confidence 99888889999999998889999888877788888888888777789999999998877777778899999999999999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEe
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYT 266 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 266 (351)
++++||+.+..+|.+.+...+.+.++++++|++++|++|++.+++....++ .+++++|++.|++.||||.|++|++++.
T Consensus 162 ~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~-~~~~~~l~~~g~~~vvvT~G~~G~~~~~ 240 (338)
T 3ljs_A 162 IVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADA-NAVIQQLWQGRAQLLLVTDAAGPVHWYT 240 (338)
T ss_dssp EEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCH-HHHHHHHTTTTCCEEEEEETTEEEEEEE
T ss_pred EEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhH-HHHHHHHHhcCCCEEEEeeCCCceEEEE
Confidence 999999988888866555677888899999999999999999998665443 2367888899999999999999999999
Q ss_pred cCceeeecCcccccccCCCCchHHHHHHHHHHHhc--------------CCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 267 KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD--------------QNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 267 ~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g--------------~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+++.+++|+++++++|||||||+|+|||+++|++| .+ +++|+++|+++|++++++.|+.
T Consensus 241 ~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~~al~~A~~~aa~~v~~~Ga~ 313 (338)
T 3ljs_A 241 RTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IVSTLRFAAAVGALAVTRQGAF 313 (338)
T ss_dssp SSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HHHHHHHHHHHHGGGC----CC
T ss_pred CCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HHHHHHHHHHHHHHHhCCCCCC
Confidence 98999999999999999999999999999999999 56 9999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhhc
Q 018696 333 PALPTKEAALKLLHTVA 349 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~~ 349 (351)
+++|+.++|+++++++.
T Consensus 314 ~~~p~~~ev~~~~~~~~ 330 (338)
T 3ljs_A 314 TAMPMLSEVLSLIQEQS 330 (338)
T ss_dssp CCTTHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhhhc
Confidence 89999999999998764
No 2
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=3.5e-52 Score=379.76 Aligned_cols=310 Identities=26% Similarity=0.401 Sum_probs=278.1
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
++++|+++|++++|++...++.|......+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 7 ~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~ 86 (319)
T 3pl2_A 7 STHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDNQY 86 (319)
T ss_dssp CCCSEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTEECTT
T ss_pred cCCCEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCcccc
Confidence 46789999999999999888877777778899999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcc-cccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSA-DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
+.+.++.+|+.+++.++.+|++.+.+++.+++ +..+++++++...+++++++|++++.+..+...+....+++.+++ +
T Consensus 87 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~ 165 (319)
T 3pl2_A 87 VATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILTTRAN-R 165 (319)
T ss_dssp EEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-C
T ss_pred EEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEecccccCchhHHHHHHHHHHHHH-C
Confidence 98888889999999888888888888766655 667888888778889999999999866555555666677776665 6
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
.++++||+++..+|.+++...+.+.++++++|++++|++|++.+++..+ ..+.+++|++.|++.|+||.|++|++++
T Consensus 166 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 242 (319)
T 3pl2_A 166 RHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETE---PERAGRALLERGVELAIVKQGPKGVMAM 242 (319)
T ss_dssp SCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCS---HHHHHHHHHHTTCSEEEEEEETTEEEEE
T ss_pred CcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCC---HHHHHHHHHhcCCCEEEEEECCCCeEEE
Confidence 7789999999889988888888999999999999999999999998753 3446788888999999999999999999
Q ss_pred ecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHH
Q 018696 266 TKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345 (351)
Q Consensus 266 ~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l 345 (351)
.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|++++++.|+...+|+.+|+++++
T Consensus 243 ~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l 315 (319)
T 3pl2_A 243 TKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGALVASRLECSTAMPTTDEVEASL 315 (319)
T ss_dssp CSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSCSGGGCCCHHHHHHHC
T ss_pred ECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCcCCCCCHHHHHHHH
Confidence 98889999999999999999999999999999999999 99999999999999999999987889999999998
Q ss_pred hh
Q 018696 346 HT 347 (351)
Q Consensus 346 ~~ 347 (351)
++
T Consensus 316 ~~ 317 (319)
T 3pl2_A 316 NQ 317 (319)
T ss_dssp C-
T ss_pred hc
Confidence 64
No 3
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=4.6e-51 Score=374.00 Aligned_cols=311 Identities=27% Similarity=0.419 Sum_probs=268.6
Q ss_pred CceEEEEccceeecccCCCCCCCCC-CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLAE-APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~~-~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
+++|+|+|++++|++...++..... ......++||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~ 82 (330)
T 3iq0_A 3 LSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRG 82 (330)
T ss_dssp -CEEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTT
T ss_pred CCCEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCCCeee
Confidence 3589999999999997643322211 112356889999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
+.+.++.+|+.+++.++.+|++.+.+++...+...++++++....+++++++|++++....+...+.+.++++.+++++.
T Consensus 83 v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~ 162 (330)
T 3iq0_A 83 ISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGG 162 (330)
T ss_dssp EEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhcCcchHHHHHHHHHHHHHcCC
Confidence 99888889999999998889986666655556667888888777899999999999876566667888999999999999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEe
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYT 266 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 266 (351)
++++||+.+..+|... ...+.+.++++++|++++|++|++.+++..+ ..+++++|.+.|++.||||.|++|++++.
T Consensus 163 ~v~~D~~~~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~ 238 (330)
T 3iq0_A 163 VISFDPNIRKEMLDIP-EMRDALHFVLELTDIYMPSEGEVLLLSPHST---PERAIAGFLEEGVKEVIVKRGNQGASYYS 238 (330)
T ss_dssp EEEEECCCCGGGGGSH-HHHHHHHHHHHTCSEECCBGGGTTTTCSCSS---HHHHHHHHHHHTCSEEEEECGGGCEEEEC
T ss_pred EEEEcCCCCccccCcH-HHHHHHHHHHhhCCEEecCHHHHHHHhCCCC---HHHHHHHHHHcCCCEEEEEeCCCceEEEE
Confidence 9999999887777654 4677888899999999999999999998743 34467888888999999999999999999
Q ss_pred cCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 267 KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 267 ~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+++.+++|+++++++|+|||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+.+.+|+.++++++++
T Consensus 239 ~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~~~ 311 (330)
T 3iq0_A 239 ANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVTRRGPMEGTSRLMEIETFIQ 311 (330)
T ss_dssp SSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSCSSSTTCCCHHHHHHHHH
T ss_pred CCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHH
Confidence 8889999999999999999999999999999999999 999999999999999999999888999999999998
Q ss_pred hhc
Q 018696 347 TVA 349 (351)
Q Consensus 347 ~~~ 349 (351)
+..
T Consensus 312 ~~~ 314 (330)
T 3iq0_A 312 RHD 314 (330)
T ss_dssp HC-
T ss_pred hcc
Confidence 654
No 4
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=3.1e-50 Score=368.88 Aligned_cols=316 Identities=27% Similarity=0.441 Sum_probs=271.9
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
++++|+++|++++|++......+......+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 10 ~~~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~ 89 (332)
T 2qcv_A 10 REFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSN 89 (332)
T ss_dssp CSEEEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred cCCcEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcc
Confidence 45689999999999998766655545567789999999999999999999999999999999999999999999999999
Q ss_pred eeecC-CCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 107 VRYDS-TARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 107 v~~~~-~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
+.+.+ +.+|+.+++.++.+|++++.+++...++..++++++....+++++++|++++....+...+.+.++++.+++.+
T Consensus 90 v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g 169 (332)
T 2qcv_A 90 LVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRND 169 (332)
T ss_dssp EEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTT
T ss_pred eEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCccccCchhHHHHHHHHHHHHHCC
Confidence 98775 46899998887777888887776556677788888876678999999999876555555678888999999999
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
.++++||+.+...|...+...+.+.++++++|++++|++|++.+++....++..+.+++|++.|++.|+||.|++|++++
T Consensus 170 ~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 249 (332)
T 2qcv_A 170 VKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAY 249 (332)
T ss_dssp CEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHTTSSCSEEEEECGGGCEEEE
T ss_pred CEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHHHcCCCEEEEEECCcceEEE
Confidence 99999999877778777777778888999999999999999999987532334556788999999999999999999998
Q ss_pred ec-CceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHH
Q 018696 266 TK-EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKL 344 (351)
Q Consensus 266 ~~-~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~ 344 (351)
.+ ++.+++|+++++++|++||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.++++++
T Consensus 250 ~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 322 (332)
T 2qcv_A 250 TKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIVVSKHSSSDAMPSVEEIEAL 322 (332)
T ss_dssp ETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHC-----CCCCHHHHHHH
T ss_pred ecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCccCCCCHHHHHHH
Confidence 87 678899999999999999999999999999999999 9999999999999999999998889999999999
Q ss_pred Hhhhc
Q 018696 345 LHTVA 349 (351)
Q Consensus 345 l~~~~ 349 (351)
+++..
T Consensus 323 l~~~~ 327 (332)
T 2qcv_A 323 IEKDE 327 (332)
T ss_dssp HHHTC
T ss_pred HhcCC
Confidence 97654
No 5
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=5.7e-51 Score=374.14 Aligned_cols=313 Identities=29% Similarity=0.422 Sum_probs=262.5
Q ss_pred cccccCCCCCCCCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHH
Q 018696 16 LSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLAN 95 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~ 95 (351)
++.+|. ++++|+|+|++++|++...++. ......+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++
T Consensus 19 ~~~~m~-----~~~~vlviG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~ 92 (336)
T 4du5_A 19 YFQSMT-----SALDVITFGEAMMLLVADRPGP-LEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLA 92 (336)
T ss_dssp ------------CEEEEEECCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHH
T ss_pred eeeccC-----CCCCEEEEChhhhhccCCCCCc-cchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHH
Confidence 555665 4689999999999999876542 3356677899999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCCeeecCCCCCeEEEEEEecCC-CceEEEecCCcccccCCccccchhhhcCccEEEEccccc-cCchhHHH
Q 018696 96 ILKENNVDTSGVRYDSTARTALAFVTLRADG-EREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRST 173 (351)
Q Consensus 96 ~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~~~~~~~~ 173 (351)
.|++.||+++++.+.++.+|+.+++.++.+| ++.+.+++..++...+++++++...+++++++|++++.. ..+...+.
T Consensus 93 ~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~ 172 (336)
T 4du5_A 93 AMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPA 172 (336)
T ss_dssp HHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSGGGSCTTHHHH
T ss_pred HHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCchhhCChHHHHH
Confidence 9999999999999888899999999888888 455556666777788888888878899999999988654 45556788
Q ss_pred HHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEE
Q 018696 174 QLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLL 253 (351)
Q Consensus 174 ~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~v 253 (351)
+.++++.+++.+.++++||+.+...|...+.+.+.+.++++++|++++|++|++.+++..+ ..++++.|.+.|++.|
T Consensus 173 ~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~---~~~~~~~l~~~g~~~v 249 (336)
T 4du5_A 173 ARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETT---PEGVARFYRQLGAKLV 249 (336)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCS---HHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCC---HHHHHHHHHhcCCCEE
Confidence 8899999999999999999988888888777788889999999999999999999998643 3446788889999999
Q ss_pred EEeeCCcceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 254 IVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 254 vvt~G~~G~~~~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|||.|++|++++.+++.+++|+++++ ++|++||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 250 vvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~~G~~ 322 (336)
T 4du5_A 250 VVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGARAVQVLGDS 322 (336)
T ss_dssp EEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHC-----
T ss_pred EEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCc
Confidence 99999999999998899999999997 999999999999999999999999 9999999999999999999998
Q ss_pred CCCCCHHHHHHH
Q 018696 333 PALPTKEAALKL 344 (351)
Q Consensus 333 ~~~~~~~~v~~~ 344 (351)
+++|+.+|++++
T Consensus 323 ~~~p~~~ev~~~ 334 (336)
T 4du5_A 323 EGLPTRAELNAA 334 (336)
T ss_dssp -CCCCHHHHHCC
T ss_pred cCCCCHHHHHhc
Confidence 889999999864
No 6
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=5.2e-52 Score=379.81 Aligned_cols=307 Identities=33% Similarity=0.543 Sum_probs=248.2
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
++++|+++|++++|++...+..|..++..+...+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 20 ~~~~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~ 99 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQIITDG 99 (327)
T ss_dssp --CCEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTTCBCTT
T ss_pred CCCCEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcCCCccc
Confidence 46789999999999999888877777888899999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
+.+.++.+|+.+++..+ +|++.+..+ ++++..++++++..+.+++++++|++++.+..+...+.+.++++.++++++
T Consensus 100 v~~~~~~~t~~~~v~~~-~g~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~ 176 (327)
T 3hj6_A 100 IQQDKERRTTIVYVSKS-TRTPDWLPY--READMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGK 176 (327)
T ss_dssp CEEESSSCCCEEEECCC-TTCCCEEEE--CSGGGGCCSCCCHHHHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEec-CCCccEEEe--cChhhhCChhhcCHhHhccCCEEEECchHhcCchhHHHHHHHHHHHHHCCC
Confidence 98888889998887665 688887776 356677777777677889999999999765555567888999999999999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEe
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYT 266 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 266 (351)
++++||+.+..+|.+.+...+.+.++++++|++++|++|++.+++..+.++ ++++|.+.|++.|+||+|++|++++.
T Consensus 177 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~---~~~~l~~~g~~~vvvt~G~~G~~~~~ 253 (327)
T 3hj6_A 177 IVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPEN---YVKRYLELGVKAVILTLGEEGVIASD 253 (327)
T ss_dssp EEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCSSG---GGGGGTTTTCSEEEEECSTTCEEEEC
T ss_pred EEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHH---HHHHHHhCCCCEEEEEECCCceEEEe
Confidence 999999988777765545567788899999999999999999999754443 45788889999999999999999999
Q ss_pred cCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 267 KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 267 ~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+|++++++
T Consensus 254 ~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 254 GEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-------VKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp SSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-------THHHHHHHHCCCSSCC--------------------
T ss_pred CCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhc
Confidence 8889999999999999999999999999999999999 999999999999999999999888999999999874
No 7
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=1.9e-49 Score=360.72 Aligned_cols=306 Identities=27% Similarity=0.414 Sum_probs=266.0
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
|+|+++|++++|++...++ +...+..+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 2 ~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~ 80 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIK 80 (313)
T ss_dssp CCEEEECCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CeEEEECcceEEEecCCCC-cccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCcCceEE
Confidence 4799999999999974333 223455678899999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEE--EecCCCceEEEecCCcccccCCccccchhhhcCccEEEEcccccc-CchhHHHHHHHHHHHHHcC
Q 018696 109 YDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLI-AEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 109 ~~~~~~t~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~ 185 (351)
+.++.+|+.+++. ++.+|++.+.+++..+++..++++++....+++++++|++++... .+...+.+.++++.+++.
T Consensus 81 ~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~- 159 (313)
T 2v78_A 81 VDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR- 159 (313)
T ss_dssp EETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE-
T ss_pred EcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh-
Confidence 8888899999998 887888888877656677778888887777889999999887542 344556777777776654
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCc--EEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQAD--IIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d--vl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
++||+.+..+|.+.+.+.+.+.++++++| ++++|++|++.+++..+ ..+++++|.+.|++.||||+|++|++
T Consensus 160 ---~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvt~G~~G~~ 233 (313)
T 2v78_A 160 ---SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTD---PDEAYRKYKELGVKVLLYKLGSKGAI 233 (313)
T ss_dssp ---EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCCC---HHHHHHHHHHTTEEEEEEECGGGCEE
T ss_pred ---CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCCC---HHHHHHHHHhCCCCEEEEEECCCCcE
Confidence 89999887778767777778888999999 99999999999998643 34467888889999999999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+++++
T Consensus 234 ~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~ 306 (313)
T 2v78_A 234 AYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLVITVRGDNELTPTLEDAER 306 (313)
T ss_dssp EEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHH
T ss_pred EeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Confidence 9988888899999999999999999999999999999999 999999999999999999999888899999999
Q ss_pred HHhhhc
Q 018696 344 LLHTVA 349 (351)
Q Consensus 344 ~l~~~~ 349 (351)
++++++
T Consensus 307 ~~~~~~ 312 (313)
T 2v78_A 307 FLNEFK 312 (313)
T ss_dssp HHHHCC
T ss_pred HHHhcc
Confidence 998764
No 8
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=7.9e-49 Score=361.57 Aligned_cols=311 Identities=21% Similarity=0.269 Sum_probs=267.6
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+|+|++++|++.... .+..++..+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 3 ~~v~viG~~~~D~~~~~~-~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~ 81 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPPEY-LMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWVG 81 (346)
T ss_dssp CEEEEECCCEEEEECSTT-CCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CcEEEeChhhhhhcCCCC-CcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCcceEEE
Confidence 579999999999996432 2333566788999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEe--cCCcccccCCccccc-hhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHc
Q 018696 109 YDSTARTALAFVTLRADGEREFLFF--RHPSADMLLCESELD-KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKES 184 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~ 184 (351)
.. +.+|+.+++..+.++++++..+ +..++...+++++++ ...+++++++|++++.. ..+...+.+.++++.++++
T Consensus 82 ~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~ 160 (346)
T 3ktn_A 82 EK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAY 160 (346)
T ss_dssp EC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred eC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHHHc
Confidence 75 5689999888776666555554 555666778888876 45789999999998754 3455567889999999999
Q ss_pred CCeEEEcCCCCCCCCCCH--HHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC-CC-----ChhHHHHHHHhcC-CCeEEEE
Q 018696 185 GSILSYDPNLRLPLWPSE--EAAREGIMSIWDQADIIKVSDDEITFLTGGD-DH-----NDDNVVLEKLFHP-NLKLLIV 255 (351)
Q Consensus 185 ~~~v~~d~~~~~~~~~~~--~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~-~~-----~~~~~~~~~l~~~-g~~~vvv 255 (351)
++++++||+.+..+|... +...+.+.++++++|++++|++|++.+++.. .. ++..+++++|.+. |++.|||
T Consensus 161 g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvv 240 (346)
T 3ktn_A 161 QKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAG 240 (346)
T ss_dssp TCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999888888643 5667888999999999999999999999876 32 2345567778774 9999999
Q ss_pred eeCCcc-------eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 256 TEGSKG-------CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 256 t~G~~G-------~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
|+|++| ++++.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|+.++++
T Consensus 241 T~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~a~aa~~v~~ 313 (346)
T 3ktn_A 241 TTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS-------LEKAVTFATVNGVLAHTI 313 (346)
T ss_dssp EEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTS
T ss_pred ecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcc
Confidence 999998 888888888999999999999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhhhc
Q 018696 329 RGAIPALPTKEAALKLLHTVA 349 (351)
Q Consensus 329 ~g~~~~~~~~~~v~~~l~~~~ 349 (351)
.|+.+ +|+.++|++++++.+
T Consensus 314 ~G~~~-~p~~~ev~~~l~~~~ 333 (346)
T 3ktn_A 314 QGDIP-LTTVKQVNHVLEHPN 333 (346)
T ss_dssp SSSCC-CCCHHHHHHHHHCTT
T ss_pred CCCCC-CCCHHHHHHHHhcCC
Confidence 99986 899999999998655
No 9
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=8.1e-49 Score=355.96 Aligned_cols=301 Identities=30% Similarity=0.400 Sum_probs=260.7
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
|+|+++|++++|++...++ +......+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 2 ~~i~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~ 80 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFR 80 (309)
T ss_dssp CSEEEESCCEEEEECSSSS-CGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCBCTTEE
T ss_pred CcEEEEccceEEEecCCCC-cccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCCceEE
Confidence 4799999999999974333 223455678899999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHcCCe
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSI 187 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~ 187 (351)
..++ +|+.+++.++.+|++++.+++..++...++++++....+++++++|++++.. +.+...+.+.++++.+++++++
T Consensus 81 ~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~ 159 (309)
T 1v1a_A 81 RAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVR 159 (309)
T ss_dssp ECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCE
T ss_pred EcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCE
Confidence 8888 9999999888888888877765666677888777777789999999998765 2456678888999999999999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEec
Q 018696 188 LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267 (351)
Q Consensus 188 v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 267 (351)
+++||+.+..+| +.+...+.+.++++++|++++|++|++.+++.. .++++ +.|++.|+||.|++|+++ .+
T Consensus 160 v~~D~~~~~~~~-~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~-----~~~~~---~~g~~~vvvt~G~~G~~~-~~ 229 (309)
T 1v1a_A 160 VSLDVNYRQTLW-SPEEARGFLERALPGVDLLFLSEEEAELLFGRV-----EEALR---ALSAPEVVLKRGAKGAWA-FV 229 (309)
T ss_dssp EEEECCCCTTTS-CHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-----HHHHH---HTCCSEEEEECGGGCEEE-EE
T ss_pred EEEeCCCCcccC-CHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-----HHHHH---hcCCCEEEEEecCCCeeE-ec
Confidence 999999887777 455667788889999999999999999999854 22333 679999999999999988 65
Q ss_pred -CceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 268 -EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 268 -~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.++++++++
T Consensus 230 ~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~~~ 302 (309)
T 1v1a_A 230 DGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRGDHEGAPYREDLEVLLK 302 (309)
T ss_dssp TTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSTTTTTCCCHHHHTTCC-
T ss_pred CCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCcCCCCHHHHHHHHh
Confidence 678899999999999999999999999999999999 999999999999999999999888899999998876
Q ss_pred hh
Q 018696 347 TV 348 (351)
Q Consensus 347 ~~ 348 (351)
+.
T Consensus 303 ~~ 304 (309)
T 1v1a_A 303 AT 304 (309)
T ss_dssp --
T ss_pred hc
Confidence 54
No 10
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=8.6e-50 Score=366.63 Aligned_cols=302 Identities=36% Similarity=0.543 Sum_probs=256.6
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+|+|++++|++... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 25 ~~ilviG~~~~D~~~~~-------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~ 97 (339)
T 1tyy_A 25 NKVWVIGDASVDLVPEK-------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLR 97 (339)
T ss_dssp CCEEEESCCEEEEEECS-------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEECTTEE
T ss_pred CCEEEECcceeEEeccC-------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcCCCchheE
Confidence 47999999999999863 23456889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeE
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v 188 (351)
+.++.+|+.+++.++.+|+|.+.+++..+++..++++ ....+++++++|++++.+..+...+.+.++++.+++.++++
T Consensus 98 ~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v 175 (339)
T 1tyy_A 98 LDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYV 175 (339)
T ss_dssp ECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEE
T ss_pred ecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEE
Confidence 8888899999988888898888776655666666655 23457889999998876556666788889999999999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecC
Q 018696 189 SYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKE 268 (351)
Q Consensus 189 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 268 (351)
++||+.+..+|.+.+.+.+.+.++++++|++++|++|++.+++..+.+ +++++|.+.|++.||||.|++|++++.++
T Consensus 176 ~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~---~~~~~l~~~g~~~VvvT~G~~G~~~~~~~ 252 (339)
T 1tyy_A 176 LFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQ---DARYYLRDLGCDTTIISLGADGALLITAE 252 (339)
T ss_dssp EEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSGG---GGSSTTGGGTCSCEEEECGGGCEEEESSS
T ss_pred EEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHH---HHHHHHHHcCCCEEEEEECCCceEEEeCC
Confidence 999998877776555667778889999999999999999999875433 24567778899999999999999999888
Q ss_pred ceeeecCcccccccCCCCchHHHHHHHHHHHhc-----CCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 269 FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD-----QNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 269 ~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g-----~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
+.+++|+++++++|||||||+|+|+|+++|++| .+ +++|+++|+++|+.++++.|+.+.+|+.+++++
T Consensus 253 ~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-------l~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~ 325 (339)
T 1tyy_A 253 GEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-------LAEAISNANACGAMAVTAKGAMTALPFPDQLNT 325 (339)
T ss_dssp CEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-------HHHHHHHHHHHHHHGGGSSSTTTTCCCHHHHHH
T ss_pred ceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-------HHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHH
Confidence 888999999999999999999999999999997 66 999999999999999999999888899999999
Q ss_pred HHhhhc
Q 018696 344 LLHTVA 349 (351)
Q Consensus 344 ~l~~~~ 349 (351)
++++.+
T Consensus 326 ~l~~~~ 331 (339)
T 1tyy_A 326 FLSSHS 331 (339)
T ss_dssp HHC---
T ss_pred HHhcCc
Confidence 998765
No 11
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=1.7e-48 Score=354.22 Aligned_cols=304 Identities=26% Similarity=0.443 Sum_probs=263.5
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+++|++++|++...++. ..+...+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 2 ~~v~viG~~~~D~~~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~ 80 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPGP-LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMK 80 (311)
T ss_dssp CEEEEESCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCE
T ss_pred CCEEEECCceEEEecCCCCc-ccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCCcceEE
Confidence 37999999999999854332 22455678899999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCC--ceEEEecCCcccccCCccccchhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHcC
Q 018696 109 YDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~ 185 (351)
+.++.+|+.+++.++.+|+ +++.+++..++...++++++....+++++++|++++.. +.+...+.+.++++.+++.
T Consensus 81 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~- 159 (311)
T 2dcn_A 81 IDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR- 159 (311)
T ss_dssp EETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE-
T ss_pred EcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh-
Confidence 8888899999998888888 88877765667777888888777789999999988754 2455567777787777654
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
++||+.+..+|. .+...+.+.++++ ++|++++|++|++.+++..+ ..+++++|.+. ++.|+||+|++|++
T Consensus 160 ---~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~-~~~vvvt~G~~G~~ 231 (311)
T 2dcn_A 160 ---SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGESD---PDKAAKAFSDY-AEIIVMKLGPKGAI 231 (311)
T ss_dssp ---EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCCC---HHHHHHHHTTT-EEEEEEEEETTEEE
T ss_pred ---CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCCC---HHHHHHHHHHh-CCEEEEEECCCCcE
Confidence 899998877775 5566677888999 99999999999999998643 34467888888 99999999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+++++
T Consensus 232 ~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~ 304 (311)
T 2dcn_A 232 VYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMIRGDQENLPTTKDIET 304 (311)
T ss_dssp EEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHH
T ss_pred EEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Confidence 9988888899999999999999999999999999999999 999999999999999999999888899999999
Q ss_pred HHhhhc
Q 018696 344 LLHTVA 349 (351)
Q Consensus 344 ~l~~~~ 349 (351)
++++++
T Consensus 305 ~~~~~~ 310 (311)
T 2dcn_A 305 FLREMK 310 (311)
T ss_dssp HHHHC-
T ss_pred HHHhcc
Confidence 998764
No 12
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=1.2e-48 Score=357.27 Aligned_cols=307 Identities=24% Similarity=0.342 Sum_probs=256.2
Q ss_pred CCceEEEEccceeecccCCCCCCC-----CCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSL-----AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENN 101 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~-----~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~g 101 (351)
++++|+++|++++|++........ .....+...+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 4 ~~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~g 83 (325)
T 3h49_A 4 DNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKEN 83 (325)
T ss_dssp -CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHHT
T ss_pred CCCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHHcC
Confidence 467899999999999754321110 011356789999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 102 VDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 102 id~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
|+++++.+.++.+|+.++++++.+|+|++.+++. .+...++.++++...+.+++++|++++........+.+.++++.+
T Consensus 84 V~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a 162 (325)
T 3h49_A 84 IDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRN-GSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA 162 (325)
T ss_dssp CBCSSCEEETTSCCCEEEEEECTTSCEEEECCTT-SHHHHCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHHHHHHHH
T ss_pred CceeeEEecCCCCCceEEEEECCCCceeEEeccC-cccccCChhhcChhhhccCCEEEEecccCCcccCHHHHHHHHHHH
Confidence 9999998888889999999999999998876532 334456777777777899999999986433333456788899999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++++ .+++|++.++.+|... +.+.++++++|++++|++|++.+++..+ ..++++.|.+.|++.|+||.|++|
T Consensus 163 ~~~~-~~~~d~~~~~~~~~~~----~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvt~G~~G 234 (325)
T 3h49_A 163 KARQ-MIICADMIKPRLNETL----DDICEALSYVDYLFPNFAEAKLLTGKET---LDEIADCFLACGVKTVVIKTGKDG 234 (325)
T ss_dssp HHTT-CEEEEEECCCSSCCCH----HHHHHHHTTCSEEECBHHHHHHHHTCSS---HHHHHHHHHTTTCSEEEEECTTSC
T ss_pred HhcC-CEEEecCCchhhhhHH----HHHHHHHhhCCEEecCHHHHHHHhCCCC---HHHHHHHHHHcCCCEEEEEeCCCC
Confidence 9988 5777877666666443 4466788999999999999999998754 334677888999999999999999
Q ss_pred eEEEecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHH
Q 018696 262 CRYYTKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEA 340 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~-~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~ 340 (351)
++++.+++.+++|++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 307 (325)
T 3h49_A 235 CFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAAISVLSVGATTGVKNRKL 307 (325)
T ss_dssp EEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSSSCSSSHH
T ss_pred eEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCCCCCCCCHHH
Confidence 99999888899999986 8999999999999999999999999 999999999999999999999989999999
Q ss_pred HHHHHhhhc
Q 018696 341 ALKLLHTVA 349 (351)
Q Consensus 341 v~~~l~~~~ 349 (351)
++++++++.
T Consensus 308 v~~~l~~~~ 316 (325)
T 3h49_A 308 VEQLLEEYE 316 (325)
T ss_dssp HHTC-----
T ss_pred HHHHHHhcc
Confidence 999998765
No 13
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=1.6e-47 Score=347.99 Aligned_cols=298 Identities=35% Similarity=0.573 Sum_probs=259.9
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
|+|+|+|++++|++...++. ..+...+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 2 ~~v~viG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~ 80 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEEGD-LKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIV 80 (313)
T ss_dssp CEEEEESCCEEEEEESSSSC-TTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CcEEEECceeeeeecCCCCC-cccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccee
Confidence 57999999999999875542 33566788999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeE
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v 188 (351)
+.++.+|+.+++.++. |++++..+ ...++..+++++++...+++++++|++++.+..+...+.+.++++.++ .++++
T Consensus 81 ~~~~~~T~~~~~~~~~-g~~~~~~~-~~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v 157 (313)
T 3ewm_A 81 KDEKKHTGIVFVQLKG-ASPSFLLY-DDVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSLI 157 (313)
T ss_dssp EESSSCCEEEEEECSS-SSCEEEEC-CSSGGGCCCGGGCCHHHHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBEE
T ss_pred ecCCCCceEEEEEecC-CCcceEee-ccCHHHhCChhhCCHHHhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCEE
Confidence 8888899999988765 88888876 233556788888877778899999999987666667788889999888 47999
Q ss_pred EEcCCCCCCCCC-CHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEec
Q 018696 189 SYDPNLRLPLWP-SEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267 (351)
Q Consensus 189 ~~d~~~~~~~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 267 (351)
++||+.+..+|. ..+...+.+.++++++|++++|++|++.+++.... ..+...||||+|++|++++.+
T Consensus 158 ~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~-----------~~~~~~vviT~G~~G~~~~~~ 226 (313)
T 3ewm_A 158 AFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE-----------VKGSMLTAITLGPKGCRLIKN 226 (313)
T ss_dssp EEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC-----------CCCSSEEEEECGGGEEEEEET
T ss_pred EEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc-----------ccCceEEEEEECCCCeEEEEC
Confidence 999998877776 56667788889999999999999999998775322 134566899999999999999
Q ss_pred CceeeecCcccccccCCCCchHHHHHHHHHHH--hcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHH
Q 018696 268 EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLA--ADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345 (351)
Q Consensus 268 ~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~--~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l 345 (351)
++.+++|+++++++|+|||||+|+|+|+++|+ +|++ +++|+++|+++|++++++.|+.+ +|+.+||++++
T Consensus 227 ~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~-~p~~~ev~~~l 298 (313)
T 3ewm_A 227 ETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-------LLKLGKFANLVAALSTQKRGAWS-TPRKDELLKYK 298 (313)
T ss_dssp TEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHHHHTTSCSSCC-CCCHHHHTTSH
T ss_pred CeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHHHccCCCCC-CCCHHHHHHHH
Confidence 88999999999999999999999999999999 9999 99999999999999999999974 89999999999
Q ss_pred hhhc
Q 018696 346 HTVA 349 (351)
Q Consensus 346 ~~~~ 349 (351)
++.+
T Consensus 299 ~~~~ 302 (313)
T 3ewm_A 299 EARE 302 (313)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 14
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=5e-48 Score=349.98 Aligned_cols=292 Identities=25% Similarity=0.345 Sum_probs=257.0
Q ss_pred ceEEEEccceeecccCCCCCCCC-----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA-----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~-----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
++|+|+|++++|+++.++..|.. ........+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 3 ~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv~ 82 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHID 82 (304)
T ss_dssp CEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTCB
T ss_pred CcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCCc
Confidence 47999999999999988777643 3456789999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
++++.+.++.+|+.+++.++.+|++++..+ ++++..+++++++. +.+++++++++++ ..+.+.+..+++.+
T Consensus 83 ~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~~a 155 (304)
T 3ry7_A 83 TSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVVAQL-----EVPIPAIISAFEIA 155 (304)
T ss_dssp CTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEEEET-----TSCHHHHHHHHHHH
T ss_pred chhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEEEcC-----CCCHHHHHHHHHHH
Confidence 999988888899999999998899988776 56666777776653 4688999999875 23567888899999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEeeCC
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
++++.++++||+.... .+.++++++|++++|++|++.+++....+ +..+++++|.+.|++.|+||.|+
T Consensus 156 ~~~~~~v~~D~~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 225 (304)
T 3ry7_A 156 KAHGVTTVLNPAPAKA----------LPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGK 225 (304)
T ss_dssp HHTTCEEEEECCSCCC----------CCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEECGG
T ss_pred HHcCCEEEEeCCcccc----------ccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEeCC
Confidence 9999999999975422 23567889999999999999999976542 34556788889999999999999
Q ss_pred cceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc-CCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 260 KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD-QNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 260 ~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g-~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
+|++++.+++.+++|+++++++|+|||||+|+|+|+++|++| ++ +++|+++|+++|+.++++.|+.+++|++
T Consensus 226 ~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-------~~~a~~~A~~~aa~~~~~~G~~~~~p~~ 298 (304)
T 3ry7_A 226 QGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-------LADAIDFGNKASSLTVQKHGAQASIPLL 298 (304)
T ss_dssp GCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-------HHHHHHHHHHHHHTTSCCCCTGGGCCCH
T ss_pred CceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhCCCCccccCCCH
Confidence 999999988999999999999999999999999999999999 99 9999999999999999999999889999
Q ss_pred HHHHHH
Q 018696 339 EAALKL 344 (351)
Q Consensus 339 ~~v~~~ 344 (351)
+|++++
T Consensus 299 ~ev~~~ 304 (304)
T 3ry7_A 299 EEVNQV 304 (304)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999863
No 15
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.7e-47 Score=351.70 Aligned_cols=294 Identities=23% Similarity=0.276 Sum_probs=255.7
Q ss_pred CCceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
++++|+++|++++|+++.++..|.. .+..+...+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.||
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GV 107 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGI 107 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTE
T ss_pred cCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 4578999999999999887765543 344677899999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHH
Q 018696 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (351)
Q Consensus 103 d~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 182 (351)
+++++.+.++.+|+.++++++++|++++..++ +++..++++++....+++++++|+++.. .+...++++.++
T Consensus 108 d~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~--~~~~~~~~~~l~~~~l~~~~~v~~~~~~------~~~~~~~~~~a~ 179 (343)
T 2rbc_A 108 DTSGMTVAPGARSALSTIIIDNRGERLIVPFY--DHRLHEKKRACTPEDIALFDAVLVDVRW------PELALDVLTVAR 179 (343)
T ss_dssp ECTTCEEETTCCCEEEEEEECTTSCEEEEEEC--CGGGGSSCCCCCHHHHTTCSEEEECSSS------HHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCCceEEEEECCCCCEEEEEcC--CCcccCChhHhcHhhhCCCCEEEEcCCC------HHHHHHHHHHHH
Confidence 99999888888999999999888999886653 4455566677766678899999998752 256778889999
Q ss_pred HcCCeEEEcCCCCCCCCCCHHHHHHHHHH-hhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCC-eEEEEeeCCc
Q 018696 183 ESGSILSYDPNLRLPLWPSEEAAREGIMS-IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL-KLLIVTEGSK 260 (351)
Q Consensus 183 ~~~~~v~~d~~~~~~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~ 260 (351)
+.++++++||... .+.+.+ +++++|++++|++|++.+++..+ ..++++.|.+.|+ +.||||.|++
T Consensus 180 ~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~---~~~~~~~l~~~g~~~~VvvT~G~~ 246 (343)
T 2rbc_A 180 ALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLET---VKDMLPVLHARYPQTFIAVTAGPA 246 (343)
T ss_dssp HTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCSS---HHHHHHHHHHHSTTSEEEEECGGG
T ss_pred HCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCCC---HHHHHHHHHHhCCCceEEEEECCc
Confidence 9999999999631 234566 88999999999999999998653 4446778888899 9999999999
Q ss_pred ceEEEecC--ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 261 GCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 261 G~~~~~~~--~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
|++++.++ +.+++|+++++++|||||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.
T Consensus 247 G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~ 319 (343)
T 2rbc_A 247 GCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSVAAALKCTVFGGRIGAPTR 319 (343)
T ss_dssp CEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSGGGGCCCH
T ss_pred ceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCccCCCCH
Confidence 99998877 78899999999999999999999999999999999 9999999999999999999988778999
Q ss_pred HHHHHHHhhh
Q 018696 339 EAALKLLHTV 348 (351)
Q Consensus 339 ~~v~~~l~~~ 348 (351)
++++++++++
T Consensus 320 ~ev~~~l~~~ 329 (343)
T 2rbc_A 320 EETEEAMRQW 329 (343)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998765
No 16
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=1.8e-47 Score=352.66 Aligned_cols=300 Identities=20% Similarity=0.319 Sum_probs=259.1
Q ss_pred CCceEEEEccceeecccCCCC-------CCCCCC---------------CCccccCCChHHHHHHHHHHcCCCeEEEeec
Q 018696 27 YDRLVVCFGEMLIDFVPTVGG-------VSLAEA---------------PAFKKAPGGAPANVAVGISRLGGSSAFVGKL 84 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~-------~~~~~~---------------~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~v 84 (351)
++++|+++|++++|++..++. .++... ......+||++.|+|++|++||.++.++|.+
T Consensus 24 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~v 103 (352)
T 4e3a_A 24 TRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNV 103 (352)
T ss_dssp CSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCC
T ss_pred CcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 468999999999999998875 222211 1336789999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEcccc
Q 018696 85 GDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSIS 164 (351)
Q Consensus 85 G~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 164 (351)
|+|.+|+.+++.|++.||+++++...++.+|+.++++++++|+|++..+ .++...++++++....+++++++|++++.
T Consensus 104 G~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~G~~ 181 (352)
T 4e3a_A 104 AADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPEDVEADVVADAKVTYFEGYL 181 (352)
T ss_dssp CSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHHTEEEEEEEGGG
T ss_pred CCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhhCCHHHHhhCCEEEEeeee
Confidence 9999999999999999999999988788899999999999999998876 46666788888888889999999999987
Q ss_pred ccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHhhhcCCCCCChhHHHH
Q 018696 165 LIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITFLTGGDDHNDDNVVL 242 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 242 (351)
+..+...+.+.++++.+++.+.++++||+... ..+..++.+.++++ ++|++++|++|++.+++..+. .+++
T Consensus 182 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~~---~~a~ 254 (352)
T 4e3a_A 182 WDPPRAKEAILDCARIAHQHGREMSMTLSDSF----CVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDDF---EEAL 254 (352)
T ss_dssp GSSSSHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSCH---HHHH
T ss_pred cCCchHHHHHHHHHHHHHHcCCEEEEECCchh----hHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCCH---HHHH
Confidence 55666778899999999999999999996310 12345677888898 899999999999999987543 3355
Q ss_pred HHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHH
Q 018696 243 EKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANAC 321 (351)
Q Consensus 243 ~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 321 (351)
+.+.+ +++.||||.|++|++++.+++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 255 ~~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~-------l~~a~~~A~~a 326 (352)
T 4e3a_A 255 NRIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLA 326 (352)
T ss_dssp HHHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHH
T ss_pred HHHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 55554 7889999999999999999999999999986 899999999999999999999999 99999999999
Q ss_pred HhHHhcccCCCCCCCCHHHHHH
Q 018696 322 GALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 322 Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
|+.++++.|+.+..|..+.+++
T Consensus 327 Aa~~v~~~G~~~~~~~~~~~~~ 348 (352)
T 4e3a_A 327 AGIVIQQIGPRPMTSLSEAAKQ 348 (352)
T ss_dssp HHHHTTSSSSSCSSCHHHHHHH
T ss_pred HHHHHcCCCCCCCcCHHHHHHH
Confidence 9999999999988877777665
No 17
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=4.4e-47 Score=344.53 Aligned_cols=296 Identities=26% Similarity=0.364 Sum_probs=256.2
Q ss_pred CceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
+++|+++|++++|+++.+++.|.. ....+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 4 ~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gv~ 83 (309)
T 1rkd_A 4 AGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNID 83 (309)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTEE
T ss_pred CCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcCCC
Confidence 457999999999999987776543 2346778999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
++++.+.++.+|+.++++++.+|++++..+ ++++..+++++++. ..++.++++|+++. .+.+.+..+++.+
T Consensus 84 ~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a 156 (309)
T 1rkd_A 84 ITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALLMQLE-----SPLESVMAAAKIA 156 (309)
T ss_dssp CTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEEECSS-----SCHHHHHHHHHHH
T ss_pred ccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEEEeCC-----CCHHHHHHHHHHH
Confidence 999988888899999999988899988775 55666677776643 45788999998653 2346778889999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
++++.++++||+.... | ..++++++|++++|++|++.+++.... ++..+.+++|.+.|++.||||.|+
T Consensus 157 ~~~g~~v~~D~~~~~~-~---------~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 226 (309)
T 1rkd_A 157 HQNKTIVALNPAPARE-L---------PDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGS 226 (309)
T ss_dssp HHTTCEEEECCCSCCC-C---------CHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECGG
T ss_pred HHcCCEEEEECCcccc-c---------hHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEECC
Confidence 9999999999986532 2 135678999999999999999986543 234456788888999999999999
Q ss_pred cceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHH
Q 018696 260 KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339 (351)
Q Consensus 260 ~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~ 339 (351)
+|++++.+++.+++|+++++++|++||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+
T Consensus 227 ~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ 299 (309)
T 1rkd_A 227 RGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVPWRE 299 (309)
T ss_dssp GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSGGGCCCHH
T ss_pred CcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHcCCCCccCCCCCHH
Confidence 99999988888899999999999999999999999999999999 99999999999999999999987889999
Q ss_pred HHHHHHhh
Q 018696 340 AALKLLHT 347 (351)
Q Consensus 340 ~v~~~l~~ 347 (351)
++++++++
T Consensus 300 ev~~~~~~ 307 (309)
T 1rkd_A 300 EIDAFLDR 307 (309)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999865
No 18
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=6e-47 Score=343.38 Aligned_cols=280 Identities=23% Similarity=0.271 Sum_probs=246.0
Q ss_pred CceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
+++|+|+|++++|+++.++..|.. ....+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 19 m~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~ 98 (310)
T 3go6_A 19 APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVG 98 (310)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHHTTCB
T ss_pred cCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCc
Confidence 568999999999999988776543 3456789999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++++... +.+|+.++++++.+|++++..+ ++++..++ ++ ...+++++++++++. .+.+.+.++++.+++
T Consensus 99 ~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~--~ga~~~l~--~~-~~~l~~~~~v~~~~~-----~~~~~~~~~~~~a~~ 167 (310)
T 3go6_A 99 LDRTVTV-PGPSGTAIIVVDASAENTVLVA--PGANAHLT--PV-PSAVANCDVLLTQLE-----IPVATALAAARAAQS 167 (310)
T ss_dssp CTTCEEC-SSCCEEEEEEECTTSCEEEEEE--CGGGGGCC--CC-TTTTTTCSEEEECSS-----SCHHHHHHHHHHHHH
T ss_pred cceeEec-CCCCCEEEEEEcCCCCEEEEec--CChhhhHH--HH-HHHhhcCCEEEECCC-----CCHHHHHHHHHHHHH
Confidence 9999654 5699999999998999998877 44555555 44 567889999998752 346788889999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
.+.++++||+.... .++.+.++++++|++++|++|++.+++. ++.||||.|++|++
T Consensus 168 ~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----------------~~~vvvt~G~~Ga~ 223 (310)
T 3go6_A 168 ADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP-----------------PTHFVITLGVRGAR 223 (310)
T ss_dssp TTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC-----------------CSEEEEECGGGCEE
T ss_pred cCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC-----------------CCEEEEEECCCCEE
Confidence 99999999985432 2456778899999999999999999874 67899999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHh----cCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA----DQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~----g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~ 339 (351)
++.+++.+++|+++++++||+||||+|+|||+++|++ |++ +++|+++|+++|++++++.|+.+.+|+.+
T Consensus 224 ~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 296 (310)
T 3go6_A 224 YVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-------RLRALRRACAAGALATLVSGVGDCAPAAA 296 (310)
T ss_dssp EEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-------HHHHHHHHHHHHHHHTTSSCSTTCCCCHH
T ss_pred EEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCCCHH
Confidence 9999899999999999999999999999999999999 887 99999999999999999999988899999
Q ss_pred HHHHHHhhhc
Q 018696 340 AALKLLHTVA 349 (351)
Q Consensus 340 ~v~~~l~~~~ 349 (351)
|+++++++.+
T Consensus 297 ev~~~l~~~~ 306 (310)
T 3go6_A 297 AIDAALRANR 306 (310)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHhcc
Confidence 9999998653
No 19
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=2.1e-47 Score=349.47 Aligned_cols=301 Identities=17% Similarity=0.180 Sum_probs=257.0
Q ss_pred CCCceEEEEccceeecccCCCCCCCCC---CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 26 AYDRLVVCFGEMLIDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 26 ~~~~~i~v~G~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
+++++|+|+|++++|++...+..|... ...+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv 83 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGY 83 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTE
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCC
Confidence 356789999999999999887766432 11578899999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 103 d~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
+++++...++.+|+.++++++++|++.+.+. .+.....++++.+. .+.+..++++++++.. + +.+..+++
T Consensus 84 ~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~l~~- 155 (328)
T 3kzh_A 84 HMDDSMVIEGGSTPTYLAILDENGEMVSAIA-DMKSIGAMNTDFIDSKREIFENAEYTVLDSDN-----P-EIMEYLLK- 155 (328)
T ss_dssp ECTTCEECTTCCCCEEEEEECTTSCEEEEEE-ECGGGGGCCHHHHHHTHHHHHTCSEEEEESSC-----H-HHHHHHHH-
T ss_pred CccceEEeCCCCCeeEEEEEcCCCCEEEEEE-chhhhhhCCHHHHHHHHHhhccCCEEEEeCCc-----H-HHHHHHHH-
Confidence 9999988888899999999999999887543 24555556666554 3567899999987642 2 56666666
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeC
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEG 258 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G 258 (351)
+++.+.++++||+.. ...+.+.++++++|++++|++|++.+++.... ++..+++++|.+.|++.|+||.|
T Consensus 156 a~~~~~~v~~D~~~~--------~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 227 (328)
T 3kzh_A 156 NFKDKTNFILDPVSA--------EKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLD 227 (328)
T ss_dssp HHTTTSEEEEECCSH--------HHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEECG
T ss_pred HhhcCCcEEEEeCCH--------HHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 788999999999631 22345667889999999999999999986643 23345678888899999999999
Q ss_pred CcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 259 ~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
++|++++.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+..|+.
T Consensus 228 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~~~~ 300 (328)
T 3kzh_A 228 ADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVKFAMTMSNITISHEETIHPDMAL 300 (328)
T ss_dssp GGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSCTTCSH
T ss_pred CCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCcCCH
Confidence 999999998888999999999999999999999999999999999 9999999999999999999999899999
Q ss_pred HHHHHHHhhhc
Q 018696 339 EAALKLLHTVA 349 (351)
Q Consensus 339 ~~v~~~l~~~~ 349 (351)
++++++++++.
T Consensus 301 ~~v~~~~~~~~ 311 (328)
T 3kzh_A 301 DTVLAKLEKTT 311 (328)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHhhhcc
Confidence 99999998764
No 20
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=1.4e-46 Score=347.12 Aligned_cols=311 Identities=20% Similarity=0.257 Sum_probs=253.5
Q ss_pred CceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v 107 (351)
+.+|+++|++++|+.... +.|..++..+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||+++++
T Consensus 24 m~kv~~~GE~m~~l~p~~-~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v 102 (351)
T 4gm6_A 24 MKQVVTIGELLMRLSTQQ-GIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQVDTAFV 102 (351)
T ss_dssp -CEEEEECCCEEEEECCT-TCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTEECTTE
T ss_pred cCCEEEEcceeEEecCCC-CCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccc
Confidence 458999999999988653 3455567788899999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc-hhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHcC
Q 018696 108 RYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD-KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 108 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~ 185 (351)
...++.+|+.++...+..+.+.+.+++...+.......+++ .+.+++++++|++++.+ ..+...+.+.++++.++++|
T Consensus 103 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g 182 (351)
T 4gm6_A 103 VEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRNG 182 (351)
T ss_dssp EECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccchhhchhHHHHHHHHHHHHHHcC
Confidence 88888777666665566677777777665555445555544 45789999999998765 45666788999999999999
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChh-HHHHHHHh-c----CCCeEEEEeeCC
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDD-NVVLEKLF-H----PNLKLLIVTEGS 259 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~-~~~~~~l~-~----~g~~~vvvt~G~ 259 (351)
++++|||++++.+| +.+..++.+.++++++|++++|++|+..+++....... ........ . .+.+.++++.+.
T Consensus 183 ~~v~~D~n~r~~lw-~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 261 (351)
T 4gm6_A 183 IKISFDMNYRAKLW-ELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIELFYATKRTVISASH 261 (351)
T ss_dssp CEEEEECCCCTTTS-CHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCCEEEEEEEEEEETTE
T ss_pred CCcccCCCcCchhh-hhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhhhhhccccceeeecc
Confidence 99999999999998 56778888999999999999999999999986643322 21222221 1 233445555544
Q ss_pred --cceEEEecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCC
Q 018696 260 --KGCRYYTKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALP 336 (351)
Q Consensus 260 --~G~~~~~~~~~~~v~~~~~-~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~ 336 (351)
.+..++.+++.++.+++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+.+|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~A~aaaal~v~~~Ga~~~~~ 334 (351)
T 4gm6_A 262 HLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-------PDETVKFATAAAGLKHSIHGDINPFD 334 (351)
T ss_dssp EEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSCCCC
T ss_pred CCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 4567778888888888875 7999999999999999999999999 99999999999999999999987765
Q ss_pred CHHHHHHHHhhh
Q 018696 337 TKEAALKLLHTV 348 (351)
Q Consensus 337 ~~~~v~~~l~~~ 348 (351)
.++|++|+++-
T Consensus 335 -~~ev~~~l~~~ 345 (351)
T 4gm6_A 335 -EKTIADFAADK 345 (351)
T ss_dssp -HHHHHHHHHC-
T ss_pred -HHHHHHHHhCC
Confidence 68999999754
No 21
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=2e-46 Score=342.69 Aligned_cols=290 Identities=25% Similarity=0.408 Sum_probs=254.4
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHc--CCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRL--GGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l--G~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
++++|+|+|++++|++... + ...+...+||++.|+|.+|++| |.++.++|.+|+|.+|+.+++.|++.||++
T Consensus 22 ~m~~i~viG~~~iD~~~~~-~-----~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~ 95 (328)
T 4e69_A 22 SMMHILSIGECMAELAPAD-L-----PGTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAAGIDG 95 (328)
T ss_dssp SSCEEEEESCCEEEEEECS-S-----TTEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHHHHHHHHHTTEEC
T ss_pred cCCcEEEecCcEEEEecCC-C-----CCceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHHHHHHHHHcCCcc
Confidence 4568999999999999862 1 1457789999999999999999 899999999999999999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCccc-ccCCccccchhhhcCccEEEEccccc--cCchhHHHHHHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSAD-MLLCESELDKNLIKQGSIFHYGSISL--IAEPCRSTQLAAMNLA 181 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~i~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 181 (351)
+++.+.++.+|+.+++.++ +|++++.+++..... ..++..++....+++++++|++++.+ ..+...+.+.++++.+
T Consensus 96 ~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a 174 (328)
T 4e69_A 96 GGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILDQCGRATLLRALAQA 174 (328)
T ss_dssp TTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEECCchhhccCchHHHHHHHHHHHH
Confidence 9999888889999999998 899998887554433 23344444456789999999998643 3455678888999999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++.+.++++||+.+..+|.+.+...+.+.++++++|++++|++|++.+++.. +..+++++|.+.|++.||||.|++|
T Consensus 175 ~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G 251 (328)
T 4e69_A 175 RATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDA---GPDATADRYARAGVRSVVVKNGPHA 251 (328)
T ss_dssp HHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCS---SHHHHHHHHHTTTCSEEEEBCTTSC
T ss_pred HhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCC---CHHHHHHHHHhcCCCEEEEEeCCCC
Confidence 9999999999998887887777888889999999999999999999999875 3445678899999999999999999
Q ss_pred eEEEecCceeeecCcc-cccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCC
Q 018696 262 CRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIP 333 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~-~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~ 333 (351)
++++.+++.+++|+++ ++++|++||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~~Ga~~ 317 (328)
T 4e69_A 252 VHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP-------LETAIAAAAALAGQVVQGKGALV 317 (328)
T ss_dssp EEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSC
T ss_pred eEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHccCCCcC
Confidence 9999998899999986 79999999999999999999999999 99999999999999999999864
No 22
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=1.5e-47 Score=355.57 Aligned_cols=315 Identities=15% Similarity=0.203 Sum_probs=254.4
Q ss_pred CCCCCCCccccccccccCCCCCCCCceEEEEccceeecccCCCC--------------------CCCC----CCCCcccc
Q 018696 4 NHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGG--------------------VSLA----EAPAFKKA 59 (351)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~G~~~iD~~~~~~~--------------------~~~~----~~~~~~~~ 59 (351)
.|||||+--+.+-+..|. +.+|+++|++++|+++.++. .|.. .+......
T Consensus 6 ~~~~~~~~~~~~~~~~m~------~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~ 79 (370)
T 3vas_A 6 HHHHHSSGLVPRGSHDLS------EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYI 79 (370)
T ss_dssp ---------------CCC------TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEE
T ss_pred cccccccCcccCCccccC------CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEe
Confidence 478888777776444453 56899999999999999884 2221 24567899
Q ss_pred CCChHHHHHHHHHHc---CCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCC
Q 018696 60 PGGAPANVAVGISRL---GGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHP 136 (351)
Q Consensus 60 ~GG~~~n~a~~l~~l---G~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~ 136 (351)
+||++.|+|++|++| |.++.++|.+|+|.+|+.+++.|++.||+++++...++.+|+.++++++ +|+|++..+ +
T Consensus 80 ~GG~~~N~A~~la~L~~~G~~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ 156 (370)
T 3vas_A 80 AGGATLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--L 156 (370)
T ss_dssp EECHHHHHHHHHHHHHCCTTCEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--E
T ss_pred cCCHHHHHHHHHHHhcCCCCcEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--c
Confidence 999999999999999 9999999999999999999999999999999987767789999999998 889988776 5
Q ss_pred cccccCCccccch----hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHh
Q 018696 137 SADMLLCESELDK----NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI 212 (351)
Q Consensus 137 ~~~~~~~~~~i~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~ 212 (351)
+++..+++++++. +.+++++++|++++... .+.+.+.++++.++++|+++++|+... .| .+..++.+.++
T Consensus 157 ga~~~l~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ld~~~~--~~--~~~~~~~l~~l 230 (370)
T 3vas_A 157 GAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSAP--FL--SQFNTKEVDEM 230 (370)
T ss_dssp EGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHH
T ss_pred chhhhCCHHHcCchhhHHHHhhCCEEEEEeeecc--CCHHHHHHHHHHHHHcCCEEEEECCcH--HH--HHHHHHHHHHH
Confidence 6667788877754 56889999999987543 356788899999999999999998521 11 12345678889
Q ss_pred hhcCcEEEeCHHHHhhhcCCCC--CChhHHHHHHHhcC-------CCeEEEEeeCCcceEEEe--cCceeeecCccc---
Q 018696 213 WDQADIIKVSDDEITFLTGGDD--HNDDNVVLEKLFHP-------NLKLLIVTEGSKGCRYYT--KEFKGRVPGVKT--- 278 (351)
Q Consensus 213 l~~~dvl~~N~~E~~~l~~~~~--~~~~~~~~~~l~~~-------g~~~vvvt~G~~G~~~~~--~~~~~~v~~~~~--- 278 (351)
++++|++++|++|++.+++... .++..+++++|.++ |++.||||+|++|++++. +++.+++|++++
T Consensus 231 l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~ 310 (370)
T 3vas_A 231 ISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDD 310 (370)
T ss_dssp HTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTT
T ss_pred HhhCCEEEcCHHHHHHHhcccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCC
Confidence 9999999999999999987532 24556677888764 999999999999999998 778889999987
Q ss_pred ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHH
Q 018696 279 KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAAL 342 (351)
Q Consensus 279 ~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~ 342 (351)
+++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+. +|+.++++
T Consensus 311 ~vvDttGAGDaF~ag~l~~l~~g~~-------l~~a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 311 QIIDTNGAGDAFAAGFIADYIRGKP-------MITSLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp TCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred CcCCCCChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 8999999999999999999999999 9999999999999999999984 47777765
No 23
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=3.6e-47 Score=343.39 Aligned_cols=281 Identities=22% Similarity=0.289 Sum_probs=247.0
Q ss_pred CceEEEEccceeecccCCCCCCCCC----CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLAE----APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
.|+|+|+|++++|+++.++..|... ...+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 2 ~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 81 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLM 81 (299)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSCE
T ss_pred CceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCc
Confidence 3679999999999999888876542 346789999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
++++. .++.+|+.++++++.+|++++..+ ++++..+++++++ .+.++.++++++++.. +.+.+.++++.+
T Consensus 82 ~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~~-----~~~~~~~~~~~a 153 (299)
T 3ikh_A 82 LLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILLQQGNF-----SLDKTRALFQYA 153 (299)
T ss_dssp EESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEEECSCS-----CHHHHHHHHHHH
T ss_pred eeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEEECCCC-----CHHHHHHHHHHH
Confidence 99884 567799999999988999988776 5666667777665 3467899999987632 457788899999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++.+.++++||+... +.+.++++++|++++|++|++.+++ .|++.|+||+|++|
T Consensus 154 ~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g----------------~g~~~vvvt~G~~G 207 (299)
T 3ikh_A 154 RSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP----------------YGVKTLVITQGAAG 207 (299)
T ss_dssp HHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC----------------CSCSEEEEECGGGC
T ss_pred HHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc----------------CCCCEEEEEECCCc
Confidence 999999999997542 2456788999999999999999887 67889999999999
Q ss_pred eEEEecCceeeecCcccccccCCCCchHHHH-HHHHHHHhcCCcccchHHHHH-HHHHHHHHHhHHhcccCCCCCCCCHH
Q 018696 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVS-GILNCLAADQNLIKDENRLRE-ALLFANACGALTVTERGAIPALPTKE 339 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~a-g~~~~l~~g~~~~~~~~~~~~-a~~~a~~~Aa~~i~~~g~~~~~~~~~ 339 (351)
++++.+++.+++|+++++++|||||||+|.| +|+++|++|++ +++ |+++|+++|+.++++.|+.+.+|+.+
T Consensus 208 ~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-------~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ 280 (299)
T 3ikh_A 208 AWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-------PDALALAHASRAAAITVSRRGTLSAFPGSR 280 (299)
T ss_dssp EEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHHHHSSSSTTTSCCHH
T ss_pred eEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCCCcccccCCCHH
Confidence 9999888899999999999999999999999 99999999999 999 99999999999999999998899999
Q ss_pred HHHHHHhhhc
Q 018696 340 AALKLLHTVA 349 (351)
Q Consensus 340 ~v~~~l~~~~ 349 (351)
++++++++..
T Consensus 281 ev~~~l~~~~ 290 (299)
T 3ikh_A 281 ELAALLTTDG 290 (299)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHHhcc
Confidence 9999998654
No 24
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=8.3e-47 Score=341.58 Aligned_cols=290 Identities=26% Similarity=0.384 Sum_probs=248.1
Q ss_pred ceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
++|+++|++++|+++.++..|.. ....+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++
T Consensus 6 ~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~ 85 (302)
T 2c4e_A 6 EKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDINI 85 (302)
T ss_dssp EEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCBC
T ss_pred CcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCcc
Confidence 37999999999999887766543 34457789999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHc
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES 184 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 184 (351)
+++...++.+|+.++++++.+|++++..+ .+++..+++++++. ++++++|+++.. .+...++++.++++
T Consensus 86 ~~~~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~---~~~~~v~~~~~~------~~~~~~~~~~a~~~ 154 (302)
T 2c4e_A 86 SKLYYSEEEETPKAWIFTDKDNNQITFFL--WGAAKHYKELNPPN---FNTEIVHIATGD------PEFNLKCAKKAYGN 154 (302)
T ss_dssp TTCEECSSSCCCEEEEEECSSCCEECCEE--CGGGGGGGGCCCCC---CCEEEEEECSSC------HHHHHHHHHHHBTT
T ss_pred cceEeeCCCCCceEEEEECCCCCEEEEEe--CChhhhCCHhhcCc---ccCCEEEEeCCC------cHHHHHHHHHHHhc
Confidence 99888888889999999988898887766 44555566666543 688999987631 27788889999999
Q ss_pred CCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEE
Q 018696 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRY 264 (351)
Q Consensus 185 ~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 264 (351)
+ ++++||+.+...|. .+.+.++++++|++++|++|++.+++....+.. +|++. ++.|+||.|++|+++
T Consensus 155 g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-----~l~~~-~~~vvvt~G~~G~~~ 222 (302)
T 2c4e_A 155 N-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID-----DYLER-VDALIVTKGSKGSVI 222 (302)
T ss_dssp B-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH-----HHHTT-CSEEEEECGGGCEEE
T ss_pred C-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH-----HHHhc-CCEEEEEECCCceEE
Confidence 9 99999985433332 345677889999999999999999875544321 56667 899999999999999
Q ss_pred EecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 265 YTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 265 ~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
+.+++.+++|+++++ ++||+||||+|.|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+++++
T Consensus 223 ~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~ 295 (302)
T 2c4e_A 223 YTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFVVEAKGCQTNLPTWDKVVE 295 (302)
T ss_dssp ECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHH
T ss_pred EeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccccccccCCCHHHHHH
Confidence 988888899999998 999999999999999999999999 999999999999999999999878899999999
Q ss_pred HHhhh
Q 018696 344 LLHTV 348 (351)
Q Consensus 344 ~l~~~ 348 (351)
++++.
T Consensus 296 ~~~~~ 300 (302)
T 2c4e_A 296 RLEKH 300 (302)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 98764
No 25
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=1.1e-46 Score=343.39 Aligned_cols=287 Identities=25% Similarity=0.355 Sum_probs=246.5
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcC----CCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLG----GSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG----~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
++|+|+|++++|++... ..+...+||++.|+|++|++|| .+|.++|.+|+|.+|+.+++.|++.||++
T Consensus 5 ~~i~viG~~~~D~~~~~--------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~ 76 (319)
T 3lhx_A 5 KKIAVIGECMIELSEKG--------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDT 76 (319)
T ss_dssp EEEEEESCCEEEEEC-----------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTTEEC
T ss_pred CceeeechhhhhhccCC--------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCc
Confidence 57999999999998754 2467899999999999999999 99999999999999999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCc-ccccCCccccc--hhhhcCccEEEEccccc--cCchhHHHHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPS-ADMLLCESELD--KNLIKQGSIFHYGSISL--IAEPCRSTQLAAMN 179 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~i~--~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 179 (351)
+++.+.++.+|+.+++.++.+|+|++.+++... ++..+++++++ .+.+++++++|++++.+ ..+...+.+.++++
T Consensus 77 ~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~ 156 (319)
T 3lhx_A 77 SLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLR 156 (319)
T ss_dssp TTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHH
T ss_pred ceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhcCchhHHHHHHHHH
Confidence 999988888999999998889999988875543 34445555443 35689999999998653 34556688899999
Q ss_pred HHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 180 ~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
.+++.+.++++||+.+..+|...+...+.+.++++++|++++|+.|++.+++.. +..+++++|.+.|++.||||.|+
T Consensus 157 ~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~ 233 (319)
T 3lhx_A 157 ECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQ---PVEDVIARTHNAGVKEVVVKRGA 233 (319)
T ss_dssp HHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCC---CHHHHHHHHHHTTCSEEEEEETT
T ss_pred HHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCC---CHHHHHHHHHhcCCCEEEEEECC
Confidence 999999999999998888888888888889999999999999999999999874 34456788999999999999999
Q ss_pred cceEEEecCcee-eecCc---ccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCC
Q 018696 260 KGCRYYTKEFKG-RVPGV---KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIP 333 (351)
Q Consensus 260 ~G~~~~~~~~~~-~v~~~---~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~ 333 (351)
+|++++.+++.+ ++|++ +++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+
T Consensus 234 ~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~Ga~~ 304 (319)
T 3lhx_A 234 DSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AENAAKRGHLTASTVIQYRGAII 304 (319)
T ss_dssp EEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSC
T ss_pred CCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhhccCCCcC
Confidence 999999887655 89986 578999999999999999999999999 99999999999999999999864
No 26
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=4e-46 Score=341.33 Aligned_cols=294 Identities=27% Similarity=0.355 Sum_probs=250.8
Q ss_pred CCceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
++++|+|+|++++|+++.++..|.. ....+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||
T Consensus 23 ~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv 102 (331)
T 2fv7_A 23 EVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDI 102 (331)
T ss_dssp -CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTTE
T ss_pred ccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHcCC
Confidence 3468999999999999987776543 234577889999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 103 d~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
+++++...++.+|+.++++++.+|++++..+ ++++..++++++.. +.++.++++++++. .+.+.+..+++.
T Consensus 103 ~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~-----~~~~~~~~~~~~ 175 (331)
T 2fv7_A 103 STEFTYQTKDAATGTASIIVNNEGQNIIVIV--AGANLLLNTEDLRAAANVISRAKVMVCQLE-----ITPATSLEALTM 175 (331)
T ss_dssp ECTTEEEESSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHHTHHHHHHCSEEEECSS-----SCHHHHHHHHHH
T ss_pred cceeeEecCCCCCceEEEEECCCCCeEEEec--CCccccCCHHHHHHHHHhhccCCEEEEecC-----CCHHHHHHHHHH
Confidence 9999988888899999999988899988776 45555677776643 35778999988653 234677888999
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeC
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEG 258 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G 258 (351)
+++.+.++++||+.....|. .++++++|++++|++|++.+++.... ++..+++++|.+.|++.|+||.|
T Consensus 176 a~~~g~~v~~Dp~~~~~~~~---------~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G 246 (331)
T 2fv7_A 176 ARRSGVKTLFNPAPAIADLD---------PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLG 246 (331)
T ss_dssp HHHTTCEEEECCCSCCTTCC---------THHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEECG
T ss_pred HHHcCCEEEEeCCcccccch---------HHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEEC
Confidence 99999999999986532222 35678999999999999999986533 23445678888999999999999
Q ss_pred CcceEEEecC--ceeeecCcccccccCCCCchHHHHHHHHHHHhc--CCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 259 SKGCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD--QNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 259 ~~G~~~~~~~--~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g--~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
++|++++.++ +.+++|+++++++|+|||||+|.|+|+++|++| ++ +++|+++|+++|+.++++.|+.+.
T Consensus 247 ~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-------~~~a~~~A~~~aa~~v~~~G~~~~ 319 (331)
T 2fv7_A 247 AEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNRSNFIAAVSVQAAGTQSS 319 (331)
T ss_dssp GGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHHHHHHHHHHHTSSSGGGG
T ss_pred CCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-------HHHHHHHHHHHHHHHhCCCCCccC
Confidence 9999998877 788999999999999999999999999999999 99 999999999999999999998878
Q ss_pred CCCHHHHHH
Q 018696 335 LPTKEAALK 343 (351)
Q Consensus 335 ~~~~~~v~~ 343 (351)
+|+.+++++
T Consensus 320 ~p~~~ev~~ 328 (331)
T 2fv7_A 320 YPYKKDLPL 328 (331)
T ss_dssp CCCGGGSCG
T ss_pred CCCHHHHhh
Confidence 889888754
No 27
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2e-45 Score=333.68 Aligned_cols=290 Identities=27% Similarity=0.369 Sum_probs=247.6
Q ss_pred ceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCC-eEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGS-SAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~-v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
++|+|+|++++|+++.++..|.. ....+...+||++.|+|++|++||.+ +.++|.+|+|.+|+.+++.|++.||
T Consensus 15 ~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV- 93 (311)
T 1vm7_A 15 LVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI- 93 (311)
T ss_dssp CCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTE-
T ss_pred CCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCCC-
Confidence 47999999999999998887653 24467888999999999999999999 9999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++.+.++.+|+.++++++.+|++++..+ ++++..+++++++.+.+++++++++++.. +.+.+. +.+++
T Consensus 94 --~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~---~~a~~ 161 (311)
T 1vm7_A 94 --TGYIRVSLPTGRAFIEVDKTGQNRIIIF--PGANAELKKELIDWNTLSESDILLLQNEI-----PFETTL---ECAKR 161 (311)
T ss_dssp --EEEEECSSCCCEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHTTCSEEEECSSS-----CHHHHH---HHHHH
T ss_pred --EEEEcCCCCCeEEEEEECCCCCEEEEEe--cCccccCCHHHhChhhcccCCEEEEeCCC-----CHHHHH---HHHHH
Confidence 6777677899999999988899988876 45666678777766678899999987532 223333 33788
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC--CCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~--~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
.+.++++||+.... .+.++++++|++++|++|++.+++.. +.++..+.+++|.+.|++.|+||.|++|
T Consensus 162 ~~~~v~~Dp~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G 231 (311)
T 1vm7_A 162 FNGIVIFDPAPAQG----------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKG 231 (311)
T ss_dssp CCSEEEECCCSCTT----------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGGGC
T ss_pred cCCEEEEeCcchhh----------hhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 89999999986422 23467899999999999999998742 2234455778888899999999999999
Q ss_pred eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHH
Q 018696 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v 341 (351)
++++.+++.+++|+++++++|+|||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 304 (311)
T 1vm7_A 232 VLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLGAQSSIPAREEV 304 (311)
T ss_dssp EEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSGGGCCCHHHH
T ss_pred eEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCcCCccccCCCHHHH
Confidence 999888888899999999999999999999999999999999 9999999999999999999998788999999
Q ss_pred HHHHhhh
Q 018696 342 LKLLHTV 348 (351)
Q Consensus 342 ~~~l~~~ 348 (351)
+++++++
T Consensus 305 ~~~l~~~ 311 (311)
T 1vm7_A 305 EAFLKNL 311 (311)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9998753
No 28
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=3.5e-45 Score=334.16 Aligned_cols=290 Identities=22% Similarity=0.323 Sum_probs=242.4
Q ss_pred ceEEEEccceeecccCC----------CCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCC-ChHHHHH
Q 018696 29 RLVVCFGEMLIDFVPTV----------GGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGD-DEFGYML 93 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~----------~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~-D~~g~~i 93 (351)
|+|+|+|++++|+++.+ +..|.. .+..+...+||++.|+|.+|++||.++.++|.+|+ | +++ +
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~-i 78 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQP-Y 78 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHH-H
T ss_pred CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHH-H
Confidence 36999999999999877 444432 23467789999999999999999999999999999 9 899 9
Q ss_pred HHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHH
Q 018696 94 ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRST 173 (351)
Q Consensus 94 ~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (351)
++.|++.||+++++.+.++.+|+.++++++.+|++.+.++ +++...+.++++... ++++++|+++. ..+.
T Consensus 79 ~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~~--~~~~~v~~~~~------~~~~ 148 (326)
T 3b1n_A 79 LDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGEA--KDIKLAIVGPD------GFQG 148 (326)
T ss_dssp HHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGGC--CSCSEEEECSC------CHHH
T ss_pred HHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhcccc--cCCCEEEECCc------cHHH
Confidence 9999999999999988888899999999988888877665 445555555555332 78999998753 2467
Q ss_pred HHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEE
Q 018696 174 QLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLL 253 (351)
Q Consensus 174 ~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~v 253 (351)
+.++++.+++.+.++++||+.+...|. .+.+.++++++|++++|++|++.+++....+. +.+.+. ++.|
T Consensus 149 ~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~-----~~l~~~-~~~v 217 (326)
T 3b1n_A 149 MVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTGWSE-----DEIASR-VQAL 217 (326)
T ss_dssp HHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCH-----HHHHTT-SSEE
T ss_pred HHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCCCCH-----HHHHhc-CCEE
Confidence 788899999999999999987655452 24456788999999999999999987533221 233343 8899
Q ss_pred EEeeCCcceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 254 IVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 254 vvt~G~~G~~~~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|||.|++|++++.+++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.
T Consensus 218 vvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~ 290 (326)
T 3b1n_A 218 IITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATAGRLASLMGALKIAHQGPQ 290 (326)
T ss_dssp EEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSTT
T ss_pred EEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999988888899999986 789999999999999999999999 9999999999999999999998
Q ss_pred CCCCCHHHHHHHHhhh
Q 018696 333 PALPTKEAALKLLHTV 348 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~ 348 (351)
+.+|+.+++++++++.
T Consensus 291 ~~~~~~~ev~~~l~~~ 306 (326)
T 3b1n_A 291 TYAPTRAEIDARFETA 306 (326)
T ss_dssp CCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh
Confidence 8889999999998754
No 29
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.9e-45 Score=334.83 Aligned_cols=297 Identities=21% Similarity=0.186 Sum_probs=244.9
Q ss_pred ceEEEEccceeecccCCCCCCCCC---CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
++|+++|++++|++...+..+... ...+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++
T Consensus 4 ~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~ 83 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVEDT 83 (317)
T ss_dssp CEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCEEC
T ss_pred CeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCCCC
Confidence 379999999999998776544322 12367899999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
+ ...++.+|+.++++++.+|++++.++. ...+..++++.+.. ..+..++++++++. .+.+.+..+++.+
T Consensus 84 ~-~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a 156 (317)
T 2nwh_A 84 P-FTFLDRRTPSYTAILERDGNLVIALAD-MDLYKLFTPRRLKVRAVREAIIASDFLLCDAN-----LPEDTLTALGLIA 156 (317)
T ss_dssp C-EEETTSCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHTSHHHHHHHHHCSEEEEETT-----SCHHHHHHHHHHH
T ss_pred C-cccCCCCCceEEEEEcCCCCEEEEEcc-hHHHhhCCHHHhhhhhhhhHhccCCEEEEeCC-----CCHHHHHHHHHHH
Confidence 8 556677999999999888998876553 23344466655432 45778999988642 2457788899999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++.+.++++||+. . ...+.+.++++++|++++|++|++.+++.. .++..+++++|.+.|++.||||.|++|
T Consensus 157 ~~~g~~v~~Dp~~-------~-~~~~~~~~ll~~~dil~~N~~E~~~l~g~~-~~~~~~~~~~l~~~g~~~vvvt~G~~G 227 (317)
T 2nwh_A 157 RACEKPLAAIAIS-------P-AKAVKLKAALGDIDILFMNEAEARALTGET-AENVRDWPNILRKAGLSGGVVTRGASE 227 (317)
T ss_dssp HHTTCCEEEECCS-------H-HHHGGGTTTGGGCSEEEEEHHHHHHHHC------CTTHHHHHHHTTCCCEEEEETTTE
T ss_pred HhcCCeEEEeCCC-------H-HHHHHHHHHhhhCeEecCCHHHHHHHhCCC-hhHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 9999999999962 1 112345678899999999999999999862 222333667888899999999999999
Q ss_pred eEEEecC-ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHH
Q 018696 262 CRYYTKE-FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEA 340 (351)
Q Consensus 262 ~~~~~~~-~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~ 340 (351)
++++.++ +.+++|+++++++|+|||||+|.|+|++++++|++ +++|+++|+++|+.++++.|+.+.+|+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 228 VVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAAAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp EEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHSSTTCCGGGCCHHH
T ss_pred EEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9998766 46889999999999999999999999999999999 999999999999999999999887899999
Q ss_pred HHHHHhhh
Q 018696 341 ALKLLHTV 348 (351)
Q Consensus 341 v~~~l~~~ 348 (351)
++++++.+
T Consensus 301 v~~~~~~~ 308 (317)
T 2nwh_A 301 VEAMLGLV 308 (317)
T ss_dssp HHHHHTTS
T ss_pred HHhHhhhh
Confidence 99966544
No 30
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=2.9e-45 Score=335.92 Aligned_cols=293 Identities=22% Similarity=0.243 Sum_probs=246.1
Q ss_pred CceEEEEccceeecccCC----------CCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHH
Q 018696 28 DRLVVCFGEMLIDFVPTV----------GGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYML 93 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~----------~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i 93 (351)
.|+|+|+|++++|+++.+ +..|.. .+..+...+||++.|+|.+|++||.++.++|.+|+| +|+ +
T Consensus 10 ~m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~-i 87 (334)
T 2pkf_A 10 HMTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FAD-Y 87 (334)
T ss_dssp SSEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHH-H
T ss_pred CCeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHH-H
Confidence 468999999999999876 444432 234577899999999999999999999999999999 999 9
Q ss_pred HHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchh--hhcCccEEEEccccccCchhH
Q 018696 94 ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN--LIKQGSIFHYGSISLIAEPCR 171 (351)
Q Consensus 94 ~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~--~i~~~~~~~~~~~~~~~~~~~ 171 (351)
++.|++.||+++++.+.++.+|+.++++++.+|++.+.++ +++...++++++... .+++++++|+++. ..
T Consensus 88 ~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~l~~~~~v~~~~~------~~ 159 (334)
T 2pkf_A 88 RDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFY--PGAMSEARNIKLADVVSAIGKPELVIIGAN------DP 159 (334)
T ss_dssp HHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEE--CGGGGGGGGCCHHHHHHHHCSCSEEEEESC------CH
T ss_pred HHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEEC--CchhhhCCHhhcChhhhhhcCCCEEEEcCC------Ch
Confidence 9999999999999988888899999999988888887665 345555666665432 3589999998764 24
Q ss_pred HHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCe
Q 018696 172 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 251 (351)
Q Consensus 172 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~ 251 (351)
+.+.++++.+++.+.++++||+.+..+|. .+.+.++++++|++++|++|++.+++....+ . +.+.+. ++
T Consensus 160 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~-~----~~l~~~-~~ 228 (334)
T 2pkf_A 160 EAMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSKTGWS-E----ADVMAQ-ID 228 (334)
T ss_dssp HHHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHHHCCC-H----HHHHTT-CS
T ss_pred HHHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhccCCCC-H----HHHHhc-CC
Confidence 67778889999999999999987665553 2456788999999999999999998754322 1 234444 78
Q ss_pred EEEEeeCCcceEEEecCc-eeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 252 LLIVTEGSKGCRYYTKEF-KGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 252 ~vvvt~G~~G~~~~~~~~-~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
.|+||.|++|++++.+++ .+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.
T Consensus 229 ~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~ 301 (334)
T 2pkf_A 229 LRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------LERSAQLGSLVAVLVLEST 301 (334)
T ss_dssp CEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSS
T ss_pred EEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCC
Confidence 899999999999988777 8899999987 789999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhhh
Q 018696 330 GAIPALPTKEAALKLLHTV 348 (351)
Q Consensus 330 g~~~~~~~~~~v~~~l~~~ 348 (351)
|+.+.+|+.+++++++++.
T Consensus 302 G~~~~~p~~~ev~~~l~~~ 320 (334)
T 2pkf_A 302 GTQEWQWDYEAAASRLAGA 320 (334)
T ss_dssp SSSCCCCCHHHHHHHHHHH
T ss_pred CCCcCCCCHHHHHHHHHHH
Confidence 9988899999999998754
No 31
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=5.7e-44 Score=329.72 Aligned_cols=310 Identities=23% Similarity=0.287 Sum_probs=254.2
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
..|+|+++|+.+.++.... ..+...+..+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 11 ~~~~~~~~ge~l~~~~~~~-~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~ 89 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLSPPD-HKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDY 89 (351)
T ss_dssp CCCEEEEESCCEEEEECST-TCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred ccceEEEechhhheecCCC-CccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCccee
Confidence 4679999999999976532 223334567788999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEE-ecCCcccccCCccccchh-hhcCccEEEEccccc-cCchhHHHHHHHHHHHHH
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLF-FRHPSADMLLCESELDKN-LIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~i~~~-~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~ 183 (351)
+.. .+.+|+.+++..+..+++.+.. .+...+...++++++... .+++++++|++++.. ..+...+.+.++++.+++
T Consensus 90 v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~ 168 (351)
T 2afb_A 90 IAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANE 168 (351)
T ss_dssp EEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHH
T ss_pred EEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHH
Confidence 886 4668998887765433334333 333334445666666543 468999999988653 344456888899999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC-----------ChhHHHHHHHhcC-CCe
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH-----------NDDNVVLEKLFHP-NLK 251 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~-----------~~~~~~~~~l~~~-g~~ 251 (351)
.+.++++||+.+..+|. .+...+.+.++++++|++++|++|+..+++.... ++..+++++|.+. |++
T Consensus 169 ~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 247 (351)
T 2afb_A 169 KGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFK 247 (351)
T ss_dssp HTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHHHHHHHCCS
T ss_pred cCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHHHHHHcCCC
Confidence 99999999998877774 4456677888999999999999999999987642 2234567777774 999
Q ss_pred EEEEeeCCcce--------EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHh
Q 018696 252 LLIVTEGSKGC--------RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGA 323 (351)
Q Consensus 252 ~vvvt~G~~G~--------~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa 323 (351)
.|+||+|++|+ +++.+++.+++|+++++++|+|||||+|+|+|+++|++|++ +++|+++|+++|+
T Consensus 248 ~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~~~aa 320 (351)
T 2afb_A 248 TVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD-------SQKKAEFAAAASC 320 (351)
T ss_dssp EEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHH
T ss_pred EEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 99999999975 67777788899999999999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHhh
Q 018696 324 LTVTERGAIPALPTKEAALKLLHT 347 (351)
Q Consensus 324 ~~i~~~g~~~~~~~~~~v~~~l~~ 347 (351)
.++++.|+.+ .|+.+++++++++
T Consensus 321 ~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 321 LKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp HHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred HHhCCCCCCC-CCCHHHHHHHHhc
Confidence 9999999874 7999999999865
No 32
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=2e-44 Score=332.20 Aligned_cols=289 Identities=19% Similarity=0.240 Sum_probs=241.8
Q ss_pred CCceEEEEccceeecccCCCC--------------------CCCC----CCCCccccCCChHHHHHHHHHHc----CCC-
Q 018696 27 YDRLVVCFGEMLIDFVPTVGG--------------------VSLA----EAPAFKKAPGGAPANVAVGISRL----GGS- 77 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~n~a~~l~~l----G~~- 77 (351)
++.+|+++|++++|++..++. .|.. .+..++..+||++.|+|++|++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 456799999999999998874 2211 24467899999999999999999 999
Q ss_pred eEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhc
Q 018696 78 SAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIK 153 (351)
Q Consensus 78 v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~ 153 (351)
+.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|++..+ .++...+++++++. +.++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~ 161 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGAANHLSSEHMRSPAVVRAMD 161 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEGGGGCCHHHHTSHHHHHHHH
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhhhhcCCHHHcCchhhHHHHh
Confidence 9999999999999999999999999999885 56779999999888 888887765 56666677777753 5688
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD 233 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~ 233 (351)
+++++|++++... .+.+.+.++++.++++++++++|+... .| .+.+++.+.++++++|++++|++|++.+++..
T Consensus 162 ~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~ 235 (347)
T 3otx_A 162 ESRIFYFSGFTLT--VDVNHVLQACRKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLPYTDIIVANRHEAKEFANMM 235 (347)
T ss_dssp HCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHH
T ss_pred hCCEEEEeeeecc--cCHHHHHHHHHHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHhhCCEEecCHHHHHHHhccc
Confidence 9999999987543 345788899999999999999998521 11 12345778889999999999999999998642
Q ss_pred --CCChhHHHHHHHh------cCCCeEEEEeeCCcceEEEecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcC
Q 018696 234 --DHNDDNVVLEKLF------HPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 234 --~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
..++..+++++|. +.+++.||||+|++|++++.+++.+++|++++ +++|||||||+|.|||+++|++|+
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~ 315 (347)
T 3otx_A 236 KWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGK 315 (347)
T ss_dssp TCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTC
T ss_pred CCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCC
Confidence 2234455667777 57999999999999999999888888999877 899999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+ +++|+++|+++|+.++++.|+.
T Consensus 316 ~-------l~~a~~~a~~~aa~~v~~~G~~ 338 (347)
T 3otx_A 316 D-------LRRCCETGHYTAQEVIQRDGCS 338 (347)
T ss_dssp C-------HHHHHHHHHHHHHHHHTCC---
T ss_pred C-------HHHHHHHHHHHHHHHHcccCCC
Confidence 9 9999999999999999999964
No 33
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=4e-44 Score=323.16 Aligned_cols=280 Identities=27% Similarity=0.339 Sum_probs=229.9
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+++|++++|++.. ...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.|| +++.
T Consensus 4 ~~v~viG~~~~D~~p~------------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~ 69 (296)
T 2qhp_A 4 NIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQI 69 (296)
T ss_dssp CEEEEESCCEEEEETT------------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEEE
T ss_pred ceEEEEchhheEecCC------------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEEe
Confidence 4799999999999832 3689999999999999999999999999999999999999999999 7787
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH-cCCe
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE-SGSI 187 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~~ 187 (351)
+.++.+|+.+++.++.+|++++.++.. .....+.+.+...+.+++++++|++++....+...+.+.++++.+++ ++.+
T Consensus 70 ~~~~~~T~~~~v~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~ 148 (296)
T 2qhp_A 70 ERVDYPTGTVQVTLDDEGVPCYEIKEG-VAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQL 148 (296)
T ss_dssp EEESSCCEEEEEC------CCEEECSS-CGGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSCE
T ss_pred ecCCCCceEEEEEECCCCCEEEEEecC-ChhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCCCE
Confidence 777789999988888788888776532 22233433333345678999999988655555567788888888887 6899
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC--CCChhHHHHHHHhc-CCCeEEEEeeCCcceEE
Q 018696 188 LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLFH-PNLKLLIVTEGSKGCRY 264 (351)
Q Consensus 188 v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~--~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~ 264 (351)
+++||+.+...|. .+.+.++++++|++++|++|++.+++.. +.++..++++++.+ .|++.||||.|++|+++
T Consensus 149 v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~ 223 (296)
T 2qhp_A 149 KIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYV 223 (296)
T ss_dssp EEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGGGCEEE
T ss_pred EEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecCCCeEE
Confidence 9999988766663 2456778899999999999999998743 22344556777877 49999999999999999
Q ss_pred EecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCC
Q 018696 265 YTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPAL 335 (351)
Q Consensus 265 ~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~ 335 (351)
+.+++.+++|+++++++|||||||+|.|+|++++++|++ +++|+++|+++|+.++++.|+.+.+
T Consensus 224 ~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~ 287 (296)
T 2qhp_A 224 FTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-------VPEAHKLAVEVSAYVCTQSGAMPEL 287 (296)
T ss_dssp EETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHHHHHTSSSSSCCC
T ss_pred EECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 988888999999999999999999999999999999999 9999999999999999999987654
No 34
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=1.8e-43 Score=322.32 Aligned_cols=290 Identities=22% Similarity=0.216 Sum_probs=242.6
Q ss_pred ceEEEEccceeec-ccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 29 RLVVCFGEMLIDF-VPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 29 ~~i~v~G~~~iD~-~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
|-++|.+++++|+ ++.++..... ....+...+||++.|+|.+|++||.+|.++|.+|+| +|+.+++.|++.||++
T Consensus 3 mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~ 81 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINH 81 (320)
T ss_dssp CEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTCCB
T ss_pred eEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCce
Confidence 5789999999999 9888876332 355678999999999999999999999999999999 9999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCC--ceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLA 176 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
+++...++ +|+.++++++ +|+ +++... ++. .+++++++. +.+++++++|++++.. .....+.+.+
T Consensus 82 ~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~ 154 (320)
T 3ie7_A 82 DFLVEAGT-STRECFVVLS-DDTNGSTMIPE--AGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPP-PHYTLSDFKE 154 (320)
T ss_dssp CCEEETTC-CCEEEEEEEE-TTCSCCEEEEC--CCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCCC-TTCCHHHHHH
T ss_pred EEEEecCC-CCceEEEEEE-CCCceeEEEeC--CCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCC-CCCCHHHHHH
Confidence 99855555 8999998888 777 776543 332 355555532 4678999999987532 3345678889
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEE
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIV 255 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvv 255 (351)
+++.+++.+.++++||+. +.+.+.+. ++|++++|++|++.+++........ .++++.+. ++.|+|
T Consensus 155 ~~~~a~~~g~~v~~D~~~------------~~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~-~~~~~~~~-~~~vvv 220 (320)
T 3ie7_A 155 LLRTVKATGAFLGCDNSG------------EYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEE-NIRTLAEK-IPYLVV 220 (320)
T ss_dssp HHHHHHHHTCEEEEECCH------------HHHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHH-HHHHHTTT-CSEEEE
T ss_pred HHHHHHhcCCEEEEECCh------------HHHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHH-HHHHHHhh-CCEEEE
Confidence 999999999999999952 23444444 9999999999999999977542222 23445545 889999
Q ss_pred eeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCC
Q 018696 256 TEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPAL 335 (351)
Q Consensus 256 t~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~ 335 (351)
|.|++|++++.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|++++++.|+ ..
T Consensus 221 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~--~~ 291 (320)
T 3ie7_A 221 SLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLKVATGCSASKVMQQDS--SS 291 (320)
T ss_dssp ECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSS--SC
T ss_pred EcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCcCC--CC
Confidence 999999999999999999999999999999999999999999999999 999999999999999999994 67
Q ss_pred CCHHHHHHHHhhhc
Q 018696 336 PTKEAALKLLHTVA 349 (351)
Q Consensus 336 ~~~~~v~~~l~~~~ 349 (351)
|+.+++++++++++
T Consensus 292 ~~~~ev~~~~~~~~ 305 (320)
T 3ie7_A 292 FDLEAAGKLKNQVS 305 (320)
T ss_dssp CCHHHHHHHGGGCE
T ss_pred CCHHHHHHHhhCeE
Confidence 99999999999875
No 35
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-45 Score=339.22 Aligned_cols=289 Identities=18% Similarity=0.224 Sum_probs=239.8
Q ss_pred CCceEEEEccceeecccCCCCC-------CCC-----------------CCCCccccCCChHHHHHHHHHHc---CCCeE
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGV-------SLA-----------------EAPAFKKAPGGAPANVAVGISRL---GGSSA 79 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~-------~~~-----------------~~~~~~~~~GG~~~n~a~~l~~l---G~~v~ 79 (351)
++.+|+++|++++|++..++.. .+. ........+||++.|+|+++++| |.++.
T Consensus 22 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~ 101 (365)
T 3loo_A 22 RDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAI 101 (365)
T ss_dssp CTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEE
T ss_pred CCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEE
Confidence 4568999999999999988762 110 11246789999999999999987 99999
Q ss_pred EEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhcCc
Q 018696 80 FVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQG 155 (351)
Q Consensus 80 ~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~~~ 155 (351)
++|.+|+|.+|+.+++.|++.||+++++.. ++.+|++++++++ +++|++..+ ++++..+++++++. ..++++
T Consensus 102 ~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T 3loo_A 102 FFGCVGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDFTPEHLRSDGNRAYLQGA 177 (365)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGCCGGGGGSHHHHHHHHHC
T ss_pred EEEEecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhCCHhHcCchhhHHHHhhC
Confidence 999999999999999999999999998877 6779999999988 788877765 56667788887753 568899
Q ss_pred cEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC--
Q 018696 156 SIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD-- 233 (351)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~-- 233 (351)
+++|++++.+. ...+.+.++++.+++.|+++++|+... .| .+..++.+.++++++|++++|++|++.+++..
T Consensus 178 ~~v~i~G~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~ 251 (365)
T 3loo_A 178 QFFYVSGFFFT--VSFESALSVAKEAAATGRMFMMNLSAP--FV--PQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNY 251 (365)
T ss_dssp SEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCST--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTC
T ss_pred CEEEEeeeecc--CCHHHHHHHHHHHHHcCCEEEEECCch--hh--hHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCC
Confidence 99999987542 345788899999999999999998532 11 23446778889999999999999999998753
Q ss_pred CCChhHHHHHHHhcC------CCeEEEEeeCCcceEEE--ecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcC
Q 018696 234 DHNDDNVVLEKLFHP------NLKLLIVTEGSKGCRYY--TKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 234 ~~~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~--~~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
..++..+++++|.+. +++.||||+|++|++++ .+++.+++|++++ +++|||||||+|.|||+++|++|+
T Consensus 252 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~ 331 (365)
T 3loo_A 252 GTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSR 331 (365)
T ss_dssp CCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCC
Confidence 234455577788774 89999999999999999 7778889999987 899999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+ +++|+++|+++|+.++++.|+.
T Consensus 332 ~-------l~~a~~~a~~~Aa~~v~~~G~~ 354 (365)
T 3loo_A 332 T-------VDVCIKCGIWAAREIIQRSGCT 354 (365)
T ss_dssp C-------HHHHHHHHHHHHHHHHHHGGGG
T ss_pred C-------HHHHHHHHHHHHHHHHcCCCCC
Confidence 9 9999999999999999999985
No 36
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=2.1e-43 Score=320.37 Aligned_cols=292 Identities=22% Similarity=0.246 Sum_probs=241.3
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|-++|.+++.+|+++.++..... .+..+...+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.||+++
T Consensus 3 ~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~ 81 (309)
T 3umo_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVA 81 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEE
T ss_pred cEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCceE
Confidence 44666678999999998887332 356788999999999999999999999999999999 99999999999999999
Q ss_pred CeeecCCCCCeEEEEEEe-cCCCceEEEecCCcccccCCccccch-----hhhcCccEEEEccccccCchhHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLR-ADGEREFLFFRHPSADMLLCESELDK-----NLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~i~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
++...+. |++++.+++ .+|++.+..+ ++++ +++++++. ..+...+++|+++.. ......+.+.++++
T Consensus 82 ~v~~~~~--t~~~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 154 (309)
T 3umo_A 82 TVEAKDW--TRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESGAILVISGSL-PPGVKLEKLTQLIS 154 (309)
T ss_dssp EEECSSC--CCCCEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHTTSCTTCEEEEESCC-CTTCCHHHHHHHHH
T ss_pred EEEecCC--CeeEEEEEECCCCcEEEEEc--CCCC--CCHHHHHHHHHHHHhcCCCCEEEEEccC-CCCCCHHHHHHHHH
Confidence 8876654 444444344 4787776654 3333 55555431 113577899998753 23345678889999
Q ss_pred HHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhc--CcEEEeCHHHHhhhcCCCC--CChhHHHHHHHhcCCC-eEEE
Q 018696 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ--ADIIKVSDDEITFLTGGDD--HNDDNVVLEKLFHPNL-KLLI 254 (351)
Q Consensus 180 ~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~--~dvl~~N~~E~~~l~~~~~--~~~~~~~~~~l~~~g~-~~vv 254 (351)
.+++++.++++||. .+.+.+++++ +|++++|++|++.+++... .++..+.+++|.+.|. +.|+
T Consensus 155 ~a~~~~~~v~~D~~------------~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vv 222 (309)
T 3umo_A 155 AAQKQGIRCIVDSS------------GEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVV 222 (309)
T ss_dssp HHHHTTCEEEEECC------------HHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEE
T ss_pred HHHhcCCEEEEECC------------cHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEE
Confidence 99999999999995 1345667776 5999999999999998753 3455567888999887 7999
Q ss_pred EeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 255 VTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 255 vt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
||.|++|++++.+++.+++|+++++++|+|||||+|.|+|+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 223 vt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~-- 293 (309)
T 3umo_A 223 VSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR-- 293 (309)
T ss_dssp EECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSTTC--
T ss_pred EEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCC--
Confidence 9999999999998889999999999999999999999999999999999 9999999999999999999984
Q ss_pred CCCHHHHHHHHhhhc
Q 018696 335 LPTKEAALKLLHTVA 349 (351)
Q Consensus 335 ~~~~~~v~~~l~~~~ 349 (351)
.|+.+|++++++++.
T Consensus 294 ~~~~~ev~~~l~~~~ 308 (309)
T 3umo_A 294 LCSHDDTQKIYAYLS 308 (309)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhc
Confidence 699999999999875
No 37
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=1.7e-43 Score=323.69 Aligned_cols=292 Identities=15% Similarity=0.176 Sum_probs=239.7
Q ss_pred CceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
+|.++|+|++++|+++.++..... ....+...+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||++
T Consensus 20 ~Mi~~v~G~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV~~ 98 (330)
T 2jg1_A 20 HMILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADIKH 98 (330)
T ss_dssp CCEEEEESSCEEEEEEEESCCCTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCEE
T ss_pred cEEEEEecchhheEEEecCCccCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCCce
Confidence 367889999999999988765322 24467889999999999999999999999999996 69999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAAM 178 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (351)
+++...++ |++++.+++.+ ++.. ++ .+++. +++++++. ..+++++++|+++.... ....+.+.+++
T Consensus 99 ~~v~~~~~--t~~~~~~v~~~-~~~~-~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~ 170 (330)
T 2jg1_A 99 AFYNIKGE--TRNCIAILHEG-QQTE-IL-EQGPE--IDNQEAAGFIKHFEQMMEKVEAVAISGSLPK-GLNQDYYAQII 170 (330)
T ss_dssp CCEEESSC--CEEEEEEEETT-EEEE-EE-ECCCB--CCHHHHHHHHHHHHHHGGGCSEEEEESCCCB-TSCTTHHHHHH
T ss_pred eEEEccCC--CeeEEEEEeCC-CcEE-EE-CCCCC--CCHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CCCHHHHHHHH
Confidence 99876643 67777777665 5543 33 23332 55554431 23688999998775432 23456788899
Q ss_pred HHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh---cCcEEEeCHHHHhhhcCCCCC---ChhHHHHHHHhcCCCeE
Q 018696 179 NLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD---QADIIKVSDDEITFLTGGDDH---NDDNVVLEKLFHPNLKL 252 (351)
Q Consensus 179 ~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~---~~dvl~~N~~E~~~l~~~~~~---~~~~~~~~~l~~~g~~~ 252 (351)
+.++++++++++||+. ..+.++++ ++|++++|++|++.+++.... ++..+++++|++.|++.
T Consensus 171 ~~a~~~g~~v~~D~~~------------~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~~ 238 (330)
T 2jg1_A 171 ERCQNKGVPVILDCSG------------ATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEW 238 (330)
T ss_dssp HHHHTTTCCEEEECCH------------HHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCSE
T ss_pred HHHHHCCCEEEEECCc------------HHHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 9999999999999951 23455665 899999999999999987532 34455678888999999
Q ss_pred EEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 253 LIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 253 vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|+||+|++|++++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 239 VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~G~~ 311 (330)
T 2jg1_A 239 IIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-------DHDLLKKANTLGMLNAQEAQTG 311 (330)
T ss_dssp EEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSS
T ss_pred EEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCC
Confidence 999999999999988888899999999999999999999999999999999 9999999999999999999984
Q ss_pred CCCCCHHHHHHHHhhhc
Q 018696 333 PALPTKEAALKLLHTVA 349 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~~ 349 (351)
.|+.+++++++++++
T Consensus 312 --~~~~~ev~~~~~~i~ 326 (330)
T 2jg1_A 312 --YVNLNNYDDLFNQIE 326 (330)
T ss_dssp --CCCGGGHHHHHTTCE
T ss_pred --CCCHHHHHHHHhceE
Confidence 689999999998765
No 38
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=7.3e-43 Score=318.62 Aligned_cols=291 Identities=21% Similarity=0.223 Sum_probs=237.9
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|.++|+|++++|+++.++..... ........+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++
T Consensus 3 m~i~v~g~~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV~~~ 81 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANIPQA 81 (323)
T ss_dssp CEEEEESSCEEEEEEECSCCCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCCBC
T ss_pred eEEEEecCceeEEEEecCCcccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCCcee
Confidence 67999999999999988873221 23467889999999999999999999999999997 599999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
++...+. |++++.+++.+ ++.. +. .+++ .+++++++. +.++.++++|+++.... ....+.+.++++
T Consensus 82 ~v~~~~~--t~~~~~~~~~~-~~~~-~~-~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~ 153 (323)
T 2f02_A 82 FTSIKEE--TRDSIAILHEG-NQTE-IL-EAGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAK-GLPSDFYQELVQ 153 (323)
T ss_dssp CEEESSC--CEEEEEEEETT-EEEE-EE-ECCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCB-TSCTTHHHHHHH
T ss_pred EEEcCCC--CeeEEEEEcCC-CeEE-EE-CCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCC-CCChHHHHHHHH
Confidence 9877543 66667777655 4443 32 2333 255554431 24688999998765432 223467788899
Q ss_pred HHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh---hcCcEEEeCHHHHhhhcCCCCC----ChhHHHHHHHhcCCCeE
Q 018696 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW---DQADIIKVSDDEITFLTGGDDH----NDDNVVLEKLFHPNLKL 252 (351)
Q Consensus 180 ~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l---~~~dvl~~N~~E~~~l~~~~~~----~~~~~~~~~l~~~g~~~ 252 (351)
.+++.+.++++||+. + .+.+++ +++|++++|++|++.+++.... ++..+.+++|.+.|++.
T Consensus 154 ~a~~~g~~v~~Dp~~--------~----~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~~~ 221 (323)
T 2f02_A 154 KAHAQEVKVLLDTSG--------D----SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEW 221 (323)
T ss_dssp HHHHTTCEEEEECCT--------H----HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTCSE
T ss_pred HHHHCCCEEEEECCh--------H----HHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 999999999999962 1 234445 5899999999999999987632 34445677888899999
Q ss_pred EEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 253 LIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 253 vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|+||.|++|++++.+++.+++|+++++++|+|||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 222 vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~- 293 (323)
T 2f02_A 222 IVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERMT- 293 (323)
T ss_dssp EEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSSS-
T ss_pred EEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCc-
Confidence 999999999999988888899999999999999999999999999999999 999999999999999999997
Q ss_pred CCCCCHHHHHHHHhhhc
Q 018696 333 PALPTKEAALKLLHTVA 349 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~~ 349 (351)
.+|+.++++++++++.
T Consensus 294 -~~~~~~ev~~~~~~~~ 309 (323)
T 2f02_A 294 -GHVDVENVKKHLMNIQ 309 (323)
T ss_dssp -SCCCHHHHHHHHTTCE
T ss_pred -CCCCHHHHHHHhhcEE
Confidence 4689999999998764
No 39
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=9.9e-44 Score=321.65 Aligned_cols=278 Identities=14% Similarity=0.245 Sum_probs=231.0
Q ss_pred CCceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
++++|+++|++++|++..++..|.. .+......+||++.|+|++|++||.++.++|.+|+| +|+.+++.|++.||+
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~ 97 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGIN 97 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTCC
T ss_pred CCCcEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCCC
Confidence 4678999999999999987776622 234567899999999999999999999999999999 999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++++...++.+|+.++++++. |++++..+ .+++..++ +++. ++++++|+++.. ...++++.+++
T Consensus 98 ~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~--~ga~~~~~-~~l~----~~~~~v~~~~~~--------~~~~~~~~a~~ 161 (306)
T 3bf5_A 98 TGHVEKFEDESGPICYIATDG-KKQVSFMH--QGAMAAWA-PQLA----DEYEYVHFSTGP--------NYLDMAKSIRS 161 (306)
T ss_dssp CTTEEEETTCCCSEEEEEECS-SCEEEEEE--CTHHHHCC-CCCC----SCEEEEEECSSS--------SHHHHHHHCCS
T ss_pred chheEecCCCCCceEEEEEcC-CeeEEEEe--CChhhhhh-Hhhc----CCCCEEEECChH--------HHHHHHHHhCC
Confidence 999877777789999999887 88887766 34444455 4442 688999998753 34456666654
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
++++||+.+...| ..+.+.++++++|++++|++|++.+++....+.. ++. ||||+|++|++
T Consensus 162 ---~v~~D~~~~~~~~-----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-----~l~------vvvT~G~~Ga~ 222 (306)
T 3bf5_A 162 ---KIIFDPSQEIHKY-----SKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP-----KVT------TIVTNGERGSS 222 (306)
T ss_dssp ---EEEECCGGGGGGS-----CHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC-----SSC------EEEEEGGGEEE
T ss_pred ---cEEEcCchhhhhc-----cHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc-----cEE------EEEeecccCeE
Confidence 8999998432111 1345677889999999999999999875443321 111 99999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc--cCCCCCCCCHHHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE--RGAIPALPTKEAA 341 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~--~g~~~~~~~~~~v 341 (351)
++.+++.+++|+++++ +|||||||+|.|||+++|++|++ +++|+++|+++|+.++++ .|+.+.+|+.+++
T Consensus 223 ~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~ev 294 (306)
T 3bf5_A 223 LFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHVIDDGIENFSLNMEDLERE 294 (306)
T ss_dssp EEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHHH
T ss_pred EEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCccccccCCCHHHH
Confidence 9988888899999999 99999999999999999999999 999999999999999999 9998788999999
Q ss_pred HHHHhhh
Q 018696 342 LKLLHTV 348 (351)
Q Consensus 342 ~~~l~~~ 348 (351)
++++++.
T Consensus 295 ~~~~~~~ 301 (306)
T 3bf5_A 295 TENYRRM 301 (306)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998754
No 40
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=1.8e-42 Score=314.26 Aligned_cols=289 Identities=21% Similarity=0.231 Sum_probs=230.5
Q ss_pred EE-EEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 31 VV-CFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 31 i~-v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
|+ |.|++++|+++.++..... ........+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.||++++
T Consensus 4 I~~v~g~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~ 82 (309)
T 3cqd_A 4 IYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVAT 82 (309)
T ss_dssp EEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEEE
T ss_pred EEEEeccchheEEEEcCCCcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCCcee
Confidence 55 6679999999988763222 244678899999999999999999999999999998 999999999999999998
Q ss_pred eeecCCCCCeEEEEE-EecCCCceEEEecCCcccccCCccccc------hhhhcCccEEEEccccccCchhHHHHHHHHH
Q 018696 107 VRYDSTARTALAFVT-LRADGEREFLFFRHPSADMLLCESELD------KNLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (351)
Q Consensus 107 v~~~~~~~t~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~i~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
+...++ |++++.+ ++.+|++..... +++. +++++++ .+.+++ +++|+++... .....+.+.++++
T Consensus 83 v~~~~~--t~~~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~-~~~~~~~~~~~~~ 154 (309)
T 3cqd_A 83 VEAKDW--TRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESG-AILVISGSLP-PGVKLEKLTQLIS 154 (309)
T ss_dssp EECSSC--CCCCEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHHTSCTT-CEEEEESCCC-TTCCHHHHHHHHH
T ss_pred EEcCCC--CeeEEEEEEcCCCCEEEEEc--CCCC--CCHHHHHHHHHHHHHhhcC-CEEEEECCCC-CCCCHHHHHHHHH
Confidence 876654 4445555 677787654432 3332 5554442 123677 9999987533 2334678888999
Q ss_pred HHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHh-hhcC-cEEEeCHHHHhhhcCCCC--CChhHHHHHHHhcCC-CeEEE
Q 018696 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-WDQA-DIIKVSDDEITFLTGGDD--HNDDNVVLEKLFHPN-LKLLI 254 (351)
Q Consensus 180 ~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~-l~~~-dvl~~N~~E~~~l~~~~~--~~~~~~~~~~l~~~g-~~~vv 254 (351)
.+++.+.++++||+. . .+.+. .+++ |++++|++|++.+++... .++..+.+++|.+.| ++.|+
T Consensus 155 ~a~~~g~~v~~D~~~--------~----~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vv 222 (309)
T 3cqd_A 155 AAQKQGIRCIVDSSG--------E----ALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVV 222 (309)
T ss_dssp HHHTTTCEEEEECCH--------H----HHHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEE
T ss_pred HHHHcCCeEEEECCh--------H----HHHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEEE
Confidence 999999999999952 1 12333 3788 999999999999998653 234455778888899 99999
Q ss_pred EeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 255 VTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 255 vt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
||.|++|++++.+++.+++|+++++++|+|||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.
T Consensus 223 vt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~~~~~G~~-- 293 (309)
T 3cqd_A 223 VSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR-- 293 (309)
T ss_dssp EECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTC-------
T ss_pred EEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCC--
Confidence 9999999999988888899999999999999999999999999999999 9999999999999999999974
Q ss_pred CCCHHHHHHHHhhhc
Q 018696 335 LPTKEAALKLLHTVA 349 (351)
Q Consensus 335 ~~~~~~v~~~l~~~~ 349 (351)
.|+.++++++++++.
T Consensus 294 ~~~~~~v~~~~~~~~ 308 (309)
T 3cqd_A 294 LCSHDDTQKIYAYLS 308 (309)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhh
Confidence 589999999998764
No 41
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=3.9e-43 Score=321.44 Aligned_cols=294 Identities=17% Similarity=0.174 Sum_probs=239.7
Q ss_pred CCceEEEEccceeecccCCCCCCCC---CC---CCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA---EA---PAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKEN 100 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~---~~---~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~ 100 (351)
..|.++|+|++++|+++.++..... .. ..+...+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.
T Consensus 11 ~~~~~~v~G~~~vD~~~~~~~~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~~ 89 (331)
T 2ajr_A 11 HHMVLTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKI 89 (331)
T ss_dssp -CCEEEEESSCEEEEEEECTTCCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHHH
T ss_pred cceEEEEecchHHeEEEEcCCccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHc
Confidence 3578999999999999988873221 23 6788899999999999999999999999999998 999999999999
Q ss_pred C--CCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHH
Q 018696 101 N--VDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRS 172 (351)
Q Consensus 101 g--id~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~ 172 (351)
| |+++++...+ .|++++++++.+|++.+.+. .+++. +++++++. ..+.+++++|+++.... ....+
T Consensus 90 g~~V~~~~v~~~~--~t~~~~~~v~~~g~~~~~~~-~~g~~--l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~ 163 (331)
T 2ajr_A 90 SKLITTNFVYVEG--ETRENIEIIDEKNKTITAIN-FPGPD--VTDMDVNHFLRRYKMTLSKVDCVVISGSIPP-GVNEG 163 (331)
T ss_dssp CTTEEEEEEEESS--CCEEEEEEEETTTTEEEEEE-CCCCC--CCHHHHHHHHHHHHHHHTTCSEEEEESCCCT-TSCTT
T ss_pred CCccceEEEEcCC--CCeEEEEEEeCCCceEEEEe-CCCCC--CCHHHHHHHHHHHHHhcccCCEEEEECCCCC-CCCHH
Confidence 9 9999887654 37777777777788734443 23332 55555432 34688999999865322 22346
Q ss_pred HHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh---cCcEEEeCHHH-HhhhcCCCCC--ChhHHHHHHHh
Q 018696 173 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD---QADIIKVSDDE-ITFLTGGDDH--NDDNVVLEKLF 246 (351)
Q Consensus 173 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~---~~dvl~~N~~E-~~~l~~~~~~--~~~~~~~~~l~ 246 (351)
.+.++++.+++.++++++||+. +.+.++++ ++|++++|++| ++.+++.... ++..+++++|+
T Consensus 164 ~~~~~~~~a~~~g~~v~~D~~~------------~~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l~ 231 (331)
T 2ajr_A 164 ICNELVRLARERGVFVFVEQTP------------RLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLA 231 (331)
T ss_dssp HHHHHHHHHHHTTCEEEEECCH------------HHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCh------------HHHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHHH
Confidence 7788899999999999999962 12444555 39999999999 9999886543 23345677787
Q ss_pred cCCCeEEEEeeCCcceEEEecCceeeec-CcccccccCCCCchHHHHHHHHHHH-hcCCcccchHHHHHHHHHHHHHHhH
Q 018696 247 HPNLKLLIVTEGSKGCRYYTKEFKGRVP-GVKTKAVDTTGAGDSFVSGILNCLA-ADQNLIKDENRLREALLFANACGAL 324 (351)
Q Consensus 247 ~~g~~~vvvt~G~~G~~~~~~~~~~~v~-~~~~~~vd~tGaGD~f~ag~~~~l~-~g~~~~~~~~~~~~a~~~a~~~Aa~ 324 (351)
+. ++.|+||+|++|++++.+++.+++| +++++++|||||||+|+|||+++|+ +|++ +++|+++|+++|++
T Consensus 232 ~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~-------~~~al~~A~a~aa~ 303 (331)
T 2ajr_A 232 EK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLEMAKFGFASALA 303 (331)
T ss_dssp HH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHHHHHHHHHHHHH
T ss_pred Hh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHH
Confidence 77 8999999999999999888888899 9999999999999999999999999 9999 99999999999999
Q ss_pred HhcccCCCCCCCCHHHHHHHHhhhc
Q 018696 325 TVTERGAIPALPTKEAALKLLHTVA 349 (351)
Q Consensus 325 ~i~~~g~~~~~~~~~~v~~~l~~~~ 349 (351)
++++.|+ .+|+.+++++++++++
T Consensus 304 ~v~~~G~--~~~~~~ev~~~~~~~~ 326 (331)
T 2ajr_A 304 ATRRKEK--YMPDLEAIKKEYDHFT 326 (331)
T ss_dssp HTTSSSC--CCCCHHHHHTTGGGEE
T ss_pred HHcCcCc--CCCCHHHHHHHHhhcE
Confidence 9999997 4689999999998764
No 42
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=3.3e-43 Score=324.01 Aligned_cols=288 Identities=19% Similarity=0.270 Sum_probs=230.5
Q ss_pred CCceEEEEccceeecccC--CCCC----CC--CCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHH
Q 018696 27 YDRLVVCFGEMLIDFVPT--VGGV----SL--AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILK 98 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~--~~~~----~~--~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~ 98 (351)
++++|+|+|++++|++.. +++. |. .....+...+||+ .|+|++|++||.+|.++|.+|+|.+|+.+++.|+
T Consensus 52 ~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~L~ 130 (352)
T 4e84_A 52 ARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVELLG 130 (352)
T ss_dssp TTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHT
T ss_pred CCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHHHH
Confidence 467899999999999875 2222 22 1345678899998 8999999999999999999999999999999999
Q ss_pred HCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHH
Q 018696 99 ENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLA 176 (351)
Q Consensus 99 ~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
+.||++ .+...++.+|+.++++++.++++....+ ....+.....+.++ .+.+++++++|++++... ..+.+.+
T Consensus 131 ~~GV~~-~~~~~~~~~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~---~~~~~~~ 205 (352)
T 4e84_A 131 SSGVTP-HLERDPALPTTIKLRVLARQQQLLRVDF-EAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKG---GLTHVTT 205 (352)
T ss_dssp TTSCEE-EEEEETTSCCCEEEEEEESSCEEEEEEE-CCCCCHHHHHHHHHHHHHHGGGCSEEEEECCSSS---SCSSHHH
T ss_pred HcCCce-eeEECCCCCCceEEEEEcCCceEEEEEc-CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCC---CHHHHHH
Confidence 999999 4556677899999988876555433322 12222112222111 356889999999975421 1223677
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC-CChhHHHHHHHhc-CCCeEEE
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD-HNDDNVVLEKLFH-PNLKLLI 254 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~-~~~~~~~~~~l~~-~g~~~vv 254 (351)
+++.++++|+++++||+.. .| ++++++|++++|++|++.+++... .++..+.+++|++ .|++.||
T Consensus 206 ~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g~~~~~~~~~~~a~~l~~~~g~~~Vv 272 (352)
T 4e84_A 206 MIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVGQWKSEDDLRARVANLRAELDIDALL 272 (352)
T ss_dssp HHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHCCCSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEE
Confidence 8889999999999999753 22 357899999999999999999322 2333455677775 7999999
Q ss_pred EeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 255 VTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 255 vt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+
T Consensus 273 vT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-------l~~al~~A~aaaa~~v~~~Ga~~- 344 (352)
T 4e84_A 273 LTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-------LVDAVVLANRAAGIVVGKLGTAT- 344 (352)
T ss_dssp EECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSCC-
T ss_pred EEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCcc-
Confidence 9999999999999899999999999999999999999999999999999 99999999999999999999865
Q ss_pred CCCHHHHH
Q 018696 335 LPTKEAAL 342 (351)
Q Consensus 335 ~~~~~~v~ 342 (351)
++++||+
T Consensus 345 -~t~~el~ 351 (352)
T 4e84_A 345 -VDYDELF 351 (352)
T ss_dssp -CCHHHHT
T ss_pred -CCHHHhc
Confidence 6888875
No 43
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=5.8e-43 Score=325.10 Aligned_cols=301 Identities=16% Similarity=0.217 Sum_probs=240.1
Q ss_pred CceEEEEccceeecccCCCCC-------CCC-----------------CCCCccccCCChHHHHHHHHHHcCCC---eEE
Q 018696 28 DRLVVCFGEMLIDFVPTVGGV-------SLA-----------------EAPAFKKAPGGAPANVAVGISRLGGS---SAF 80 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~-------~~~-----------------~~~~~~~~~GG~~~n~a~~l~~lG~~---v~~ 80 (351)
+..|+.||++++|++..++.. ++. .....+..+||++.|+|+++++||.+ |.|
T Consensus 26 ~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~f 105 (372)
T 3uq6_A 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 105 (372)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEE
Confidence 456999999999999887632 110 12345668999999999999999965 999
Q ss_pred EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhcCcc
Q 018696 81 VGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGS 156 (351)
Q Consensus 81 v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~~~~ 156 (351)
+|.||+|.+|+++++.|++.||+++++...++.+|+.++++++ +++|++..+ .+++..+++++++. ..++.++
T Consensus 106 iG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~~~~i~~~~~~~~i~~a~ 182 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQ 182 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCS
T ss_pred EeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcchhhhhhhhHHHHhhccc
Confidence 9999999999999999999999999988888888998888775 788988877 56666688777753 5678999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC--
Q 018696 157 IFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD-- 234 (351)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~-- 234 (351)
++|++++.+ +...+...++++.+++.+.++++|++... ..+..++.+.++++++|++++|++|++.+++...
T Consensus 183 ~~~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~ldls~~~----~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~ 256 (372)
T 3uq6_A 183 VYYIAGFVI--NTCYEGMLKIAKHSLENEKLFCFNLSAPF----LSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLL 256 (372)
T ss_dssp EEEEEGGGH--HHHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCC
T ss_pred EEEEecccc--cccHHHHHHHHHHHHHcCCeEeeccccch----hhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCc
Confidence 999998743 34567888999999999999999986321 1233467788899999999999999999987543
Q ss_pred CChhHHHHHHHhc-------CCCeEEEEeeCCcceEEEecCc--e--eeecCcc-cccccCCCCchHHHHHHHHHHHhcC
Q 018696 235 HNDDNVVLEKLFH-------PNLKLLIVTEGSKGCRYYTKEF--K--GRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 235 ~~~~~~~~~~l~~-------~g~~~vvvt~G~~G~~~~~~~~--~--~~v~~~~-~~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
.+...+.++.+.+ .+++.+|||+|++|++++.+++ . +.+++.+ .++||||||||+|+|||+++|++|+
T Consensus 257 ~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~ 336 (372)
T 3uq6_A 257 EDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGK 336 (372)
T ss_dssp SSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCC
Confidence 2334445555543 4678899999999999987653 2 3344444 4799999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+ +++|+++|+++|+.+|++.|+ .+|++++++-.|+
T Consensus 337 ~-------l~~a~~~a~~aAa~vv~~~Ga--~lp~r~~~~lkln 371 (372)
T 3uq6_A 337 P-------MITSLHAAVKAAAYIICRSGF--SLGSRDSYSLKIN 371 (372)
T ss_dssp C-------HHHHHHHHHHHHHHHHTSSSS--CCCCGGGCC----
T ss_pred C-------HHHHHHHHHHHHHHHHcCCCC--CCCChhHHHHHhc
Confidence 9 999999999999999999997 4678888766554
No 44
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=6.2e-43 Score=322.07 Aligned_cols=289 Identities=19% Similarity=0.264 Sum_probs=239.5
Q ss_pred CCceEEEEccceeecccCCCC-------CCCC-----------------CCCCccccCCChHHHHHHHHHHcC----CCe
Q 018696 27 YDRLVVCFGEMLIDFVPTVGG-------VSLA-----------------EAPAFKKAPGGAPANVAVGISRLG----GSS 78 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~n~a~~l~~lG----~~v 78 (351)
++++|+|+|++++|+++..+. .... ........+||++.|+|++|++|| .++
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~ 84 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 84 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcE
Confidence 456899999999999998775 1111 124677889999999999999996 999
Q ss_pred EEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCcc-ccc----hhhhc
Q 018696 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCES-ELD----KNLIK 153 (351)
Q Consensus 79 ~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~i~----~~~i~ 153 (351)
.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|++++..+ .+++..++++ +++ .+.++
T Consensus 85 ~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~~~~~~~~~~~~~~~~~~ 160 (345)
T 1bx4_A 85 TFFGCIGIDKFGEILKRKAAEAHVDAHYYE-QNEQPTGTCAACIT-GDNRSLIAN--LAAANCYKKEKHLDLEKNWMLVE 160 (345)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCEEEEEE-ESSSCCCEEEEEEE-TTEEEEEEE--CGGGGGCCGGGTTTSHHHHHHHH
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCceeeee-cCCCCCceEEEEEc-CCceEeeec--cchHhhcCcccccCcHHHHHHHh
Confidence 999999999999999999999999999886 45678999998887 677776544 5556667776 664 34577
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD 233 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~ 233 (351)
+++++|++++... .+.+.+..+++.+++.++++++||... +| .+...+.+.++++++|++++|++|++.+++..
T Consensus 161 ~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~ 234 (345)
T 1bx4_A 161 KARVCYIAGFFLT--VSPESVLKVAHHASENNRIFTLNLSAP--FI--SQFYKESLMKVMPYVDILFGNETEAATFAREQ 234 (345)
T ss_dssp HCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCSH--HH--HHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHT
T ss_pred hCCEEEEEEEecc--CCHHHHHHHHHHHHHcCCEEEEeCCcH--HH--HHHHHHHHHHHhccCCEEeCCHHHHHHHhccc
Confidence 8999999886542 345788889999999999999998521 11 12344667789999999999999999998643
Q ss_pred --CCChhHHHHHHHhc------CCCeEEEEeeCCcceEEEecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcC
Q 018696 234 --DHNDDNVVLEKLFH------PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 234 --~~~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
..++..+++++|.+ .|++.||||+|++|++++.+++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 235 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~ 314 (345)
T 1bx4_A 235 GFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDK 314 (345)
T ss_dssp TCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCC
Confidence 23445567788887 6999999999999999998888889999877 899999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+ +++|+++|+++|+.++++.|+.
T Consensus 315 ~-------~~~a~~~A~~~aa~~v~~~G~~ 337 (345)
T 1bx4_A 315 P-------LTECIRAGHYAASIIIRRTGCT 337 (345)
T ss_dssp C-------HHHHHHHHHHHHHHHTTSSSSC
T ss_pred C-------HHHHHHHHHHHHHHHHhccCCC
Confidence 9 9999999999999999999975
No 45
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=5.3e-42 Score=310.65 Aligned_cols=288 Identities=20% Similarity=0.272 Sum_probs=237.1
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|-++|.|++++|+++.++..... .+......+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++
T Consensus 1 mi~tv~~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~ 79 (306)
T 2abq_A 1 MIYTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIGLS 79 (306)
T ss_dssp CEEEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEecCchheEEEEcCCcccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCceE
Confidence 35899999999999988875322 24467889999999999999999999999999998 799999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hh---hcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL---IKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
++...+ .|++++.+ .+|++.... .+++ .+++++++. +. +++++++|+++.... ....+.+.++++.
T Consensus 80 ~v~~~~--~t~~~~~~--~~g~~~~~~--~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~ 150 (306)
T 2abq_A 80 FIEVEG--DTRINVKI--KGKQETELN--GTAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQ-AMPQTIYRSMTQI 150 (306)
T ss_dssp CEEESS--CCEEEEEE--ESSSCEEEB--CCCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHH
T ss_pred EEEcCC--CCceEEEE--eCCceEEEE--CCCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCC-CCCHHHHHHHHHH
Confidence 987754 36666655 467775432 2333 355555432 11 578999998775432 2344678889999
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEee
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTE 257 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~ 257 (351)
+++++.++++||+. +.+.++++ ++|++++|++|+..+++.... ++..+.++++.+.|++.|+||.
T Consensus 151 a~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 218 (306)
T 2abq_A 151 AKERGAFVAVDTSG------------EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSF 218 (306)
T ss_dssp HHTTTCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHhcCCEEEEECCh------------HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 99999999999951 24567888 999999999999999987543 2334567888889999999999
Q ss_pred CCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCC
Q 018696 258 GSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337 (351)
Q Consensus 258 G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~ 337 (351)
|++|++++.+++.+++|+++++++|+|||||+|.|||+++|++|++ +++|+++|+++|+.++++. .+|+
T Consensus 219 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~----~~p~ 287 (306)
T 2abq_A 219 AGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSD----GFCT 287 (306)
T ss_dssp GGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSS----SCCC
T ss_pred CCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCc----CCCC
Confidence 9999999988888899999999999999999999999999999999 9999999999999999998 5689
Q ss_pred HHHHHHHHhhhc
Q 018696 338 KEAALKLLHTVA 349 (351)
Q Consensus 338 ~~~v~~~l~~~~ 349 (351)
.+++++++++++
T Consensus 288 ~~ev~~~~~~~~ 299 (306)
T 2abq_A 288 REEVERLQQQLQ 299 (306)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhEE
Confidence 999999998765
No 46
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=6.4e-42 Score=310.85 Aligned_cols=279 Identities=20% Similarity=0.282 Sum_probs=225.1
Q ss_pred CCCCceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHC
Q 018696 25 GAYDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKEN 100 (351)
Q Consensus 25 ~~~~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~ 100 (351)
..++++|+++|++++|++..++..|.. ........+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.
T Consensus 14 ~~~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~ 93 (312)
T 2hlz_A 14 VPRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRY 93 (312)
T ss_dssp ---CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHT
T ss_pred CCCCCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHc
Confidence 345678999999999999887766543 2334568899999999999999999999999999999999999999999
Q ss_pred CCCCCCeeecCCCCCeEEEEEEe-cCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHH
Q 018696 101 NVDTSGVRYDSTARTALAFVTLR-ADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (351)
Q Consensus 101 gid~~~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
||+++++...++.+|++.+++++ .+|++++..++ ++...+++++++...+++++++|+++.. .+...++++
T Consensus 94 GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~--~~~~~~~~~~~~~~~l~~~~~v~~~~~~------~~~~~~~~~ 165 (312)
T 2hlz_A 94 SVDLRYTVFQTTGSVPIATVIINEASGSRTILYYD--RSLPDVSATDFEKVDLTQFKWIHIEGRN------ASEQVKMLQ 165 (312)
T ss_dssp TCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEEC--CCCCCCCHHHHHTSCGGGEEEEEEECSS------HHHHHHHHH
T ss_pred CCCCccceeccCCCCCeEEEEEECCCCceEEEecC--CccccCCHHHhhHhhhccCCEEEEeccC------HHHHHHHHH
Confidence 99999998876667888777766 47888887663 3445577766655567889999998762 245566677
Q ss_pred HHHHc--------CCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCC-
Q 018696 180 LAKES--------GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL- 250 (351)
Q Consensus 180 ~a~~~--------~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~- 250 (351)
.+++. +.++++|+... ++.+.++++++|++++|++|++.+ +.. +..++++.+.+.+.
T Consensus 166 ~a~~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~~---~~~~~~~~l~~~~~~ 231 (312)
T 2hlz_A 166 RIDAHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GFQ---SAEEALRGLYGRVRK 231 (312)
T ss_dssp HHHHHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TCC---SHHHHHHHHGGGSCT
T ss_pred HHHHhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CCC---CHHHHHHHHHHhcCC
Confidence 77765 68899998532 134567899999999999999987 532 23345566665433
Q ss_pred -eEEEEeeCCcceEEEec-CceeeecCcc-cccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhc
Q 018696 251 -KLLIVTEGSKGCRYYTK-EFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 327 (351)
Q Consensus 251 -~~vvvt~G~~G~~~~~~-~~~~~v~~~~-~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~ 327 (351)
+.|+||+|++|++++.+ ++.+++|+++ ++++|||||||+|.|+|+++|++|++ +++|+++|+++|+.+++
T Consensus 232 g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~ 304 (312)
T 2hlz_A 232 GAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQEALRFGCQVAGKKCG 304 (312)
T ss_dssp TCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 89999999999999875 4578899964 68999999999999999999999999 99999999999999999
Q ss_pred ccCCC
Q 018696 328 ERGAI 332 (351)
Q Consensus 328 ~~g~~ 332 (351)
+.|+.
T Consensus 305 ~~G~~ 309 (312)
T 2hlz_A 305 LQGFD 309 (312)
T ss_dssp SSSSG
T ss_pred hcCcc
Confidence 99863
No 47
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.6e-42 Score=314.99 Aligned_cols=292 Identities=20% Similarity=0.264 Sum_probs=231.0
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCC-CeEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGG-SSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~-~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v 107 (351)
|+|+|+|++++|++.... ......+||++.|+|.+|++||. +|.++|.+|+| +|+.+++.|++.||+++++
T Consensus 3 ~~ilviG~~~iD~~~~~~-------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v 74 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIETPF-------GRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGI 74 (313)
T ss_dssp CCEEEESCCEEEEEECSS-------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEEEEEE
T ss_pred ccEEEEeEEEEeeecCCC-------CcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCCccce
Confidence 579999999999997532 23578999999999999999999 99999999999 9999999999999999999
Q ss_pred eecCCCCCeEEEEE--EecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 108 RYDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 108 ~~~~~~~t~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
.+.++.+|....-. .+.++++.+... .+....+.+. + .+.+++++++|++++. .+...++++.+ +.+
T Consensus 75 ~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~v~~~~~~------~~~~~~~~~~~-~~~ 143 (313)
T 3kd6_A 75 QVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH-V-PQYYRDSKFVCLGNID------PELQLKVLDQI-DDP 143 (313)
T ss_dssp EEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC-C-CGGGTTCSEEEECSSC------HHHHHHHHTTC-SSC
T ss_pred EEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc-c-hHHHccCCEEEEcCCC------HHHHHHHHHHH-hhC
Confidence 88877677432211 122333333322 2333333332 2 3567899999997742 34455666666 578
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
.++++||. .+|. +...+.+.++++++|++++|++|++.+++.. +..++++.|.+.|++.|+||.|++|++++
T Consensus 144 ~~v~~Dp~---~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 215 (313)
T 3kd6_A 144 KLVVCDTM---NFWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDP---NLVKTARIIREMGPKTLIIKKGEHGALLF 215 (313)
T ss_dssp SEEEEECC---HHHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCS---CHHHHHHHHHTTSCSEEEEECTTSCEEEE
T ss_pred CEEEEcCh---hhhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCC---CHHHHHHHHHHcCCCEEEEeeCCCcEEEE
Confidence 89999983 1221 2345677788999999999999999999864 34457788999999999999999999999
Q ss_pred ecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC-CCCHHHHHH
Q 018696 266 TKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA-LPTKEAALK 343 (351)
Q Consensus 266 ~~~~~~~v~~~~~-~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~-~~~~~~v~~ 343 (351)
.+++.+++|++++ +++|||||||+|+|||+++|++|.+. ...++++|+++|+++|+.++++.|+.+. .|+.+++++
T Consensus 216 ~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~--~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev~~ 293 (313)
T 3kd6_A 216 TDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNT--SEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEVDD 293 (313)
T ss_dssp ETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHHHH
T ss_pred ECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCc--cccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHHHH
Confidence 9988999999998 79999999999999999999999820 1123999999999999999999998743 589999999
Q ss_pred HHhhhc
Q 018696 344 LLHTVA 349 (351)
Q Consensus 344 ~l~~~~ 349 (351)
++++..
T Consensus 294 ~l~~~~ 299 (313)
T 3kd6_A 294 RYQSFL 299 (313)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997654
No 48
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=3.5e-42 Score=321.22 Aligned_cols=291 Identities=21% Similarity=0.277 Sum_probs=236.5
Q ss_pred CCCCceEEEEccceeecccCCCC-C-----CCC-----------------CCCCccccCCChHHHHHHHHHHc---CCCe
Q 018696 25 GAYDRLVVCFGEMLIDFVPTVGG-V-----SLA-----------------EAPAFKKAPGGAPANVAVGISRL---GGSS 78 (351)
Q Consensus 25 ~~~~~~i~v~G~~~iD~~~~~~~-~-----~~~-----------------~~~~~~~~~GG~~~n~a~~l~~l---G~~v 78 (351)
.+++++|+|+|++++|+++..+. . +.. +.......+||++.|+|++|++| |.+|
T Consensus 29 ~~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v 108 (383)
T 2abs_A 29 ATGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSA 108 (383)
T ss_dssp -CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSE
T ss_pred CCCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcE
Confidence 34567899999999999987765 1 111 13356788999999999999999 8999
Q ss_pred EEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEE
Q 018696 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIF 158 (351)
Q Consensus 79 ~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~ 158 (351)
.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|++++..+ .+++..+++++...+.+++++++
T Consensus 109 ~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~l~~~~~~~~~l~~~~~v 184 (383)
T 2abs_A 109 GYMGAIGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGSFRLPEDWTTFASGALIF 184 (383)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGGCCCCTTHHHHTTTCCEE
T ss_pred EEEEEecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhhCChhhhhHHHhhcCCEE
Confidence 999999999999999999999999999886 55679999999887 687876554 55565566654445678899999
Q ss_pred EEccccccCchhHHHHHHHHHHHHH-cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC---
Q 018696 159 HYGSISLIAEPCRSTQLAAMNLAKE-SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD--- 234 (351)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~--- 234 (351)
|++++... .+.+.+.++++.+++ .++++++||.. .+| .+...+.+.++++++|++++|++|++.+++...
T Consensus 185 ~~~g~~~~--~~~~~~~~~~~~a~~~~g~~v~~d~~~--~~~--~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~ 258 (383)
T 2abs_A 185 YATAYTLT--ATPKNALEVAGYAHGIPNAIFTLNLSA--PFC--VELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVA 258 (383)
T ss_dssp EEEGGGGT--TCHHHHHHHHHHHHTSTTCEEEEECCC--HHH--HHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-
T ss_pred EEeeeccc--CCHHHHHHHHHHHHHhcCCEEEEeCCc--HHH--HHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCccc
Confidence 99986542 345788889999998 89999999852 112 133456677889999999999999999976431
Q ss_pred -----------CChhHHHHHHHhc------C-CCeEEEEeeCCcceEEE-----ecCceeeecCccc---ccccCCCCch
Q 018696 235 -----------HNDDNVVLEKLFH------P-NLKLLIVTEGSKGCRYY-----TKEFKGRVPGVKT---KAVDTTGAGD 288 (351)
Q Consensus 235 -----------~~~~~~~~~~l~~------~-g~~~vvvt~G~~G~~~~-----~~~~~~~v~~~~~---~~vd~tGaGD 288 (351)
.++..+++++|.+ . |++.||||+|++|++++ .+++.+++|++++ +++|||||||
T Consensus 259 ~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGD 338 (383)
T 2abs_A 259 AEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGD 338 (383)
T ss_dssp ---------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHH
T ss_pred ccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHH
Confidence 2233456677776 4 89999999999999988 5557788898877 8999999999
Q ss_pred HHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 289 SFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 289 ~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+|+|||+++|++|++ +++|+++|+++|+.++++.|+.
T Consensus 339 aF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 339 AFVGGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp HHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999 9999999999999999999985
No 49
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-41 Score=307.12 Aligned_cols=288 Identities=21% Similarity=0.248 Sum_probs=234.6
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|-++|.|++++|+++.++..... ........+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++
T Consensus 1 mi~tvt~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~ 79 (306)
T 2jg5_A 1 MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQSN 79 (306)
T ss_dssp CEEEEESSCEEEEEEECSSCCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEecCceEEEEEEcCCcccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCcee
Confidence 35899999999999988874322 24467889999999999999999999999999999 699999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hh---hcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL---IKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
++...+ .|++++.+ .+|++..... ++++ +++++++. +. +++++++|+++.... ....+.+..+++.
T Consensus 80 ~v~~~~--~t~~~~~~--~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~ 150 (306)
T 2jg5_A 80 FIEVDE--DTRINVKL--KTGQETEINA--PGPH--ITSTQFEQLLQQIKNTTSEDIVIVAGSVPS-SIPSDAYAQIAQI 150 (306)
T ss_dssp CEECSS--CCEEEEEE--ESSSEEEEEC--CCCC--CCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHH
T ss_pred EEEcCC--CCeEEEEE--cCCCEEEEEC--CCCC--CCHHHHHHHHHHHHhccCCCEEEEeCCCCC-CCChHHHHHHHHH
Confidence 987654 36666654 4677654332 3332 55555432 11 578999998765322 2234677788899
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEee
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVTE 257 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt~ 257 (351)
+++++.++++||+. ..+.++++ ++|++++|++|++.+++....+ +..+.++++.+.|++.|+||+
T Consensus 151 a~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 218 (306)
T 2jg5_A 151 TAQTGAKLVVDAEK------------ELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSL 218 (306)
T ss_dssp HHHHCCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEEEC
T ss_pred HHHCCCEEEEECCh------------HHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEcc
Confidence 99999999999851 23455677 6999999999999999865432 334567788889999999999
Q ss_pred CCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCC
Q 018696 258 GSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337 (351)
Q Consensus 258 G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~ 337 (351)
|++|++++.+++.+++|+++++++|++||||+|+|||+++|++|++ +++|+++|+++|+.++++.| +|+
T Consensus 219 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G----~~~ 287 (306)
T 2jg5_A 219 GGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-------IEKAFQQAVACGTATAFDED----LAT 287 (306)
T ss_dssp GGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS----SCC
T ss_pred CCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC----CCC
Confidence 9999999988888899999999999999999999999999999999 99999999999999999998 589
Q ss_pred HHHHHHHHhhhc
Q 018696 338 KEAALKLLHTVA 349 (351)
Q Consensus 338 ~~~v~~~l~~~~ 349 (351)
.+++++++++++
T Consensus 288 ~~ev~~~~~~~~ 299 (306)
T 2jg5_A 288 RDAIEKIKSQVT 299 (306)
T ss_dssp HHHHHHHHTTCE
T ss_pred HHHHHHHHhceE
Confidence 999999998764
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2.7e-38 Score=285.09 Aligned_cols=269 Identities=20% Similarity=0.183 Sum_probs=213.0
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
.|.++|.+..|.+.... .....+||++.|+|.+|++||.++.++|.+|+|. +.+++.|++.||+++++..
T Consensus 13 ~~~~~~~~~~~~~~~~~--------~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~ 82 (298)
T 1vk4_A 13 MITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS 82 (298)
T ss_dssp EEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC
T ss_pred eEEEeccccCceEeecC--------eEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec
Confidence 48999999999988653 4568899999999999999999999999999996 7888999999999997753
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEE
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILS 189 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~ 189 (351)
..+|++..++ +.+|++++..+ .+++..++++++.. ..++++|++++.. .+ ...++++.+++.+.+++
T Consensus 83 --~~~t~~~~i~-~~~g~~~~~~~--~~~~~~l~~~~~~~---~~~~~v~~~~~~~-~~----~~~~~~~~~~~~g~~v~ 149 (298)
T 1vk4_A 83 --PRTTSIENRY-GSDPDTRESFL--ISAADPFTESDLAF---IEGEAVHINPLWY-GE----FPEDLIPVLRRKVMFLS 149 (298)
T ss_dssp --SSCEEEEEEC------CCEEEE--EECCCCCCGGGGGG---CCSSEEEECCSST-TS----SCGGGHHHHHHHCSEEE
T ss_pred --CCCcEEEEEE-cCCCCeeEEEe--ccccccCCHHHcCc---CCCCEEEECCccc-cc----ccHHHHHHHHHcCCEEE
Confidence 3455555443 55677776655 34445566665532 5789999988633 12 22356677788899999
Q ss_pred EcCCCC----------CCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 190 YDPNLR----------LPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 190 ~d~~~~----------~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
+||+.. ...| +.+.++++++|++++|++|++.+++..+ ..+++++|.+.|++.||||. +
T Consensus 150 ~D~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvT~-~ 218 (298)
T 1vk4_A 150 ADAQGFVRVPENEKLVYRDW-------EMKEKYLKYLDLFKVDSREAETLTGTND---LRESCRIIRSFGAKIILATH-A 218 (298)
T ss_dssp EETHHHHEEEETTEEEECCC-------TTHHHHGGGCSEEEEEHHHHHHHHSCSC---HHHHHHHHHHTTCSSEEEEE-T
T ss_pred EecCccccccccccccccch-------HHHHhhcccCCEEecCHHHHHHHhCCCC---HHHHHHHHHhcCCCEEEEEc-C
Confidence 999621 1112 1356788999999999999999998653 34467788889999999999 9
Q ss_pred cceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh-cCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 260 KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA-DQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 260 ~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~-g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
+|++++.+ +.+++|+++++++|||||||+|+|||+++|++ |++ +++|+++|+++|+.++++.|+.+. |+.
T Consensus 219 ~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~-~~~ 289 (298)
T 1vk4_A 219 SGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKMRHPGPLRR-EDL 289 (298)
T ss_dssp TEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHTTSSSSCCG-GGG
T ss_pred CCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCCCC-CCH
Confidence 99999877 78889999999999999999999999999999 999 999999999999999999998754 566
Q ss_pred HHH
Q 018696 339 EAA 341 (351)
Q Consensus 339 ~~v 341 (351)
+++
T Consensus 290 ~el 292 (298)
T 1vk4_A 290 EAI 292 (298)
T ss_dssp GGC
T ss_pred HHH
Confidence 554
No 51
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.92 E-value=5.7e-25 Score=196.50 Aligned_cols=226 Identities=15% Similarity=0.152 Sum_probs=162.1
Q ss_pred cCCCeEE-EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch---
Q 018696 74 LGGSSAF-VGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--- 149 (351)
Q Consensus 74 lG~~v~~-v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--- 149 (351)
||+.... +|.+|.| .....|++.||++.++.. . +..+.+|.+.+ .. ..++++.+..
T Consensus 19 L~i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~-----~g--~~~~~~~~~~~~~ 78 (283)
T 2ddm_A 19 VAVQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT--------V-LLSNTPHYDTF-----YG--GAIPDEWFSGYLR 78 (283)
T ss_dssp EEEEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE--------E-EESSCTTSSCC-----CE--EECCHHHHHHHHH
T ss_pred EEEecccCCCcchHH----HHHHHHHHcCCeeeEEeE--------E-EeccCCCcCce-----ee--eeCCHHHHHHHHH
Confidence 3444343 6677766 235688889999887642 1 22233454432 11 1233333321
Q ss_pred ---h--hhcCccEEEEccccccCchhHHHHHHHHHHHHH--cCCeEEEcCCCCC---CCCCCHHHHHHHHHHhhhcCcEE
Q 018696 150 ---N--LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE--SGSILSYDPNLRL---PLWPSEEAAREGIMSIWDQADII 219 (351)
Q Consensus 150 ---~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~---~~~~~~~~~~~~~~~~l~~~dvl 219 (351)
+ .++++++++++.+. .....+.+.++++.+++ .++++++||+.+. ..|.+.+.......++++++|++
T Consensus 79 ~l~~~~~~~~~~~v~~G~l~--~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil 156 (283)
T 2ddm_A 79 ALQERDALRQLRAVTTGYMG--TASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGI 156 (283)
T ss_dssp HHHHTTCCTTCCEEEECCCS--CHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEE
T ss_pred HHHhcCCcccCCEEEECCcC--CHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEe
Confidence 1 35678999987643 23345778888888887 7899999998654 34433322333345688999999
Q ss_pred EeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc-------ceEEEecCceeeecCcccccccCCCCchHH
Q 018696 220 KVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK-------GCRYYTKEFKGRVPGVKTKAVDTTGAGDSF 290 (351)
Q Consensus 220 ~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~-------G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f 290 (351)
++|+.|++.+++.... ++..+.++++.+.|++.||||.|++ |++++.+++.++++++++. +|++||||+|
T Consensus 157 ~pN~~E~~~L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf 235 (283)
T 2ddm_A 157 TPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLF 235 (283)
T ss_dssp CCBHHHHHHHHTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHH
T ss_pred cCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHH
Confidence 9999999999987543 2344567889999999999999999 8888888878888888876 8999999999
Q ss_pred HHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 291 VSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 291 ~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
.|+|++++++|++ +++|+++|+++++.++++.
T Consensus 236 ~a~~~~~l~~g~~-------~~~A~~~A~a~a~~~v~~~ 267 (283)
T 2ddm_A 236 CAQLISGLLKGKA-------LTDAVHRAGLRVLEVMRYT 267 (283)
T ss_dssp HHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999875
No 52
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.92 E-value=2.5e-25 Score=201.60 Aligned_cols=219 Identities=18% Similarity=0.160 Sum_probs=159.4
Q ss_pred CeEEEeecCCChHHHHHHHHHHHCCCCCCCeeec--CCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hh-
Q 018696 77 SSAFVGKLGDDEFGYMLANILKENNVDTSGVRYD--STARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL- 151 (351)
Q Consensus 77 ~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~--~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~- 151 (351)
++.++|.+|+|. |+.+ |++.||+++++... .+ +|++.+ + .+ ..++++++.. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~-------------~--~g--~~l~~~~i~~~~~~~ 69 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH-------------W--KG--QVLNSDELQELYEGL 69 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC-------------C--CE--EECCHHHHHHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC-------------c--cC--ccCCHHHHHHHHHHH
Confidence 467889999997 9888 99999999887653 21 222111 1 11 1244444431 11
Q ss_pred ----hcCccEEEEccccccCchhHHHHHHHHHHHHHcCC--eEEEcCCCCCC------CCCCHHHHHHHHHH-hhhcCcE
Q 018696 152 ----IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS--ILSYDPNLRLP------LWPSEEAAREGIMS-IWDQADI 218 (351)
Q Consensus 152 ----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~v~~d~~~~~~------~~~~~~~~~~~~~~-~l~~~dv 218 (351)
+.++++++++... .....+.+.++++.++++|. ++++||+.+.. +|.. +.+.+.+.+ +++++|+
T Consensus 70 ~~~~~~~~~~v~~G~~~--~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~-~~~~~~l~~~ll~~~di 146 (312)
T 2yxt_A 70 RLNNMNKYDYVLTGYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVP-EDLLPVYKEKVVPLADI 146 (312)
T ss_dssp HHTTCCCCSEEEECCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSC-TTHHHHHHHTTGGGCSE
T ss_pred HhcCCccCCEEEECCCC--CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCC-HHHHHHHHHHhhhhCCE
Confidence 6678998875432 33345667788888888875 48999986533 3432 234556664 8999999
Q ss_pred EEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc------ceEEE-------ec-C----ceeeecCccc
Q 018696 219 IKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK------GCRYY-------TK-E----FKGRVPGVKT 278 (351)
Q Consensus 219 l~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~------G~~~~-------~~-~----~~~~v~~~~~ 278 (351)
+++|+.|++.+++.... ++..+++++|++.|++.||||.|+. |++++ .+ + +.+++|++++
T Consensus 147 l~pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (312)
T 2yxt_A 147 ITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV 226 (312)
T ss_dssp ECCCHHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC
T ss_pred EcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc
Confidence 99999999999986533 2344567888889999999998876 46665 33 2 5678888888
Q ss_pred ccccCCCCchHHHHHHHHHHHh-cCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 279 KAVDTTGAGDSFVSGILNCLAA-DQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 279 ~~vd~tGaGD~f~ag~~~~l~~-g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
++ |++||||+|.|+|+++|++ |++ +++|+++|+++++.++++
T Consensus 227 ~v-dttGAGDaf~a~~~~~l~~~g~~-------l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 DA-VFVGTGDLFAAMLLAWTHKHPNN-------LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp SS-CCSSHHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCchHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 86 9999999999999999999 999 999999999999888864
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.88 E-value=2.1e-22 Score=180.23 Aligned_cols=161 Identities=14% Similarity=0.111 Sum_probs=125.0
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHcCCe-EEEcCCCCC----CCCCCHHHHHHHHHH-hhhcCcEEEeCHHHHhh
Q 018696 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI-LSYDPNLRL----PLWPSEEAAREGIMS-IWDQADIIKVSDDEITF 228 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~~----~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~~~ 228 (351)
+++++++.+. +.+.+..+++.+++.+.+ +++||+.+. .+|. . ...+.+.+ +++++|++++|+.|++.
T Consensus 95 ~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~-~-~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGMLA-----ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS-P-SAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC-H-HHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCCC-----CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC-H-HHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 6787776531 456778888899999986 999998653 2342 2 23344554 78999999999999999
Q ss_pred hcCC-CCC--ChhHHHHHHHhcCCCeEEEEeeCCcc-----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 229 LTGG-DDH--NDDNVVLEKLFHPNLKLLIVTEGSKG-----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 229 l~~~-~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
|++. ... ++..+++++|.+.|++.||||.|++| ++++.+++.+++++++++++|++||||+|+|+|+++|++
T Consensus 168 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 168 LLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp HHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 9987 433 23345678888899999999999999 888887778889998899999999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|.+ +++|+++|+++++.++++.
T Consensus 248 g~~-------~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 248 HRS-------WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp SSS-------HHHHHHHHHHHHHHHHTTG
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999999776
No 54
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.86 E-value=7.3e-21 Score=168.71 Aligned_cols=164 Identities=18% Similarity=0.130 Sum_probs=132.2
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCC-eEEEcCCCCCCCCCC--HHHHHHHHH-HhhhcCcEEEeCHHHHhhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS-ILSYDPNLRLPLWPS--EEAAREGIM-SIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~~~~~~~--~~~~~~~~~-~~l~~~dvl~~N~~E~~~l 229 (351)
..++++++.+. ..+....+++.+++.+. ++++||+.+...|.. .+...+.+. ++++++|++++|+.|++.|
T Consensus 74 ~~d~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGMLP-----TVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCCC-----SHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCCC-----CHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 67888886532 14677778888888888 599999876543321 122334554 7889999999999999999
Q ss_pred cCCC-CCC--hhHHHHHHHhcCCCeEEEEeeCC--cce----EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 230 TGGD-DHN--DDNVVLEKLFHPNLKLLIVTEGS--KGC----RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 230 ~~~~-~~~--~~~~~~~~l~~~g~~~vvvt~G~--~G~----~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
++.. ..+ +..+.++++.+.|++.||||.|. +|+ +++.+++.+++++++++++|++|+||+|+|+|++++++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9875 322 34456788889999999999999 784 66777778889998899999999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|++ +++|+++|+++++.++++.
T Consensus 229 g~~-------~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 229 GAE-------VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999999875
No 55
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.86 E-value=1.6e-20 Score=165.30 Aligned_cols=162 Identities=19% Similarity=0.170 Sum_probs=127.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcC-CeEEEcCCCCCC----CCCCHHHHHHHH-HHhhhcCcEEEeCHHHHh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESG-SILSYDPNLRLP----LWPSEEAAREGI-MSIWDQADIIKVSDDEIT 227 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~----~~~~~~~~~~~~-~~~l~~~dvl~~N~~E~~ 227 (351)
..+.++++.+. ..+....+++.+++.+ .++++||+.+.. +|. . ...+.+ .++++++|++++|+.|++
T Consensus 70 ~~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~-~-~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGALG-----DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA-K-EAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEECCCC---------C-H-HHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC-h-HHHHHHHHhhcccCeEEeCCHHHHH
Confidence 35777776431 3456777888888888 899999986543 332 2 222344 457899999999999999
Q ss_pred hhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc-c----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 228 FLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK-G----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 228 ~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~-G----~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
.+++.... ++..+.+++|.+.|++.|++|.|++ | ++++.+++.+++++++++++|++||||+|.|+|++++++
T Consensus 143 ~L~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 143 ALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp HHHCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 99987543 2344567888889999999999998 8 778777788889998899999999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|++ +++|+++|+++++.++++.
T Consensus 223 g~~-------~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 223 GRP-------LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999998764
No 56
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.82 E-value=1.6e-19 Score=161.30 Aligned_cols=166 Identities=17% Similarity=0.129 Sum_probs=131.9
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCC--CCC-CHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLP--LWP-SEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~--~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
..+.+.++.+ .+....+.+.++++.+++.+.++++||..... +|. ..++..+.+.++++++|++++|..|++.|+
T Consensus 77 ~~~aik~G~l--~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGYL--GSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECCC--SSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 5677777643 24445677778888776678999999987643 343 234566677889999999999999999999
Q ss_pred CCCC-----CChhHHHHHHHhcCCCeEEEEeeCC-------cceEEEecC--ceeeecCcccccccCCCCchHHHHHHHH
Q 018696 231 GGDD-----HNDDNVVLEKLFHPNLKLLIVTEGS-------KGCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILN 296 (351)
Q Consensus 231 ~~~~-----~~~~~~~~~~l~~~g~~~vvvt~G~-------~G~~~~~~~--~~~~v~~~~~~~vd~tGaGD~f~ag~~~ 296 (351)
|... .++..+++++|.+.|++.|+||.|. .|++++.++ +.++++.+.+. +|++|+||+|.|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 9763 2345567888999999999999653 577777653 45677777765 8999999999999999
Q ss_pred HHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 297 CLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 297 ~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
+|++|.+ +++|+++|+++++.++++.
T Consensus 234 ~l~~g~~-------l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 234 SLMQGDS-------LPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999998888764
No 57
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.81 E-value=4.2e-19 Score=158.68 Aligned_cols=165 Identities=18% Similarity=0.099 Sum_probs=131.1
Q ss_pred cCccEEEEccccccCchhHHHHHHHHHHHHHcC--CeEEEcCCCCC----CCCCCHHHHHHHHH-HhhhcCcEEEeCHHH
Q 018696 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG--SILSYDPNLRL----PLWPSEEAAREGIM-SIWDQADIIKVSDDE 225 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~v~~d~~~~~----~~~~~~~~~~~~~~-~~l~~~dvl~~N~~E 225 (351)
...|++..+. +......+.+.++++.+++++ .++++||.... .+| . +...+.+. .+++++|++++|..|
T Consensus 76 ~~~d~v~~G~--l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~-~-~~~~~~l~~~ll~~~diitpN~~E 151 (289)
T 3pzs_A 76 KDCDAVLSGY--IGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIV-A-PGVAEFFCNEALPASDMIAPNLLE 151 (289)
T ss_dssp GGCCEEEECC--CSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECS-C-HHHHHHHHHTHHHHCSEECCCHHH
T ss_pred cCCCEEEECC--CCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCccc-C-HHHHHHHHHHhhccCCEEeCCHHH
Confidence 5788876554 334556678888898888766 88999996432 233 2 34455555 488999999999999
Q ss_pred HhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeC-Ccce-------EEEecCceeeecCccccc--ccCCCCchHHHHH
Q 018696 226 ITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEG-SKGC-------RYYTKEFKGRVPGVKTKA--VDTTGAGDSFVSG 293 (351)
Q Consensus 226 ~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G-~~G~-------~~~~~~~~~~v~~~~~~~--vd~tGaGD~f~ag 293 (351)
++.|+|.... ++..+++++|.+.|++.|+||.| .+|+ +++++++.++++++.++. +|++|+||+|.|+
T Consensus 152 ~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~ 231 (289)
T 3pzs_A 152 LEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGL 231 (289)
T ss_dssp HHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHH
Confidence 9999997643 34455688899999999999985 5786 777777778888777776 9999999999999
Q ss_pred HHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 294 ILNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 294 ~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
|++++++|.+ +++|+++|+++++.+++.
T Consensus 232 ~~~~l~~g~~-------~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 232 LLVNLLKGEP-------LDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999988777765
No 58
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.81 E-value=5.8e-19 Score=156.87 Aligned_cols=163 Identities=20% Similarity=0.194 Sum_probs=126.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCC--CCCC-CHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL--PLWP-SEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~--~~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
..+.+.++.+ .+....+.+.++++.. .+.++++||+.+. .+|. ..++..+.++++++++|++++|..|++.|+
T Consensus 74 ~~daik~G~l--~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~ 149 (282)
T 3h74_A 74 HFDQALIGYV--GSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLT 149 (282)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHh
Confidence 6778877643 2222333444444332 3689999998764 3343 234566677789999999999999999999
Q ss_pred CCCC--CChhHHHHHHHhc-CCC-eEEEEeeCC----cceEEEe-cCceeeecCcccccccCCCCchHHHHHHHHHHHhc
Q 018696 231 GGDD--HNDDNVVLEKLFH-PNL-KLLIVTEGS----KGCRYYT-KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 301 (351)
Q Consensus 231 ~~~~--~~~~~~~~~~l~~-~g~-~~vvvt~G~----~G~~~~~-~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g 301 (351)
+... .++..+++++|.+ .|+ +.|+||.|. .|++++. +++.++++++++. +|++|+||+|.|+|+++|++|
T Consensus 150 g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g 228 (282)
T 3h74_A 150 GAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRG 228 (282)
T ss_dssp TCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCC
Confidence 8753 2455667888998 999 999999994 7888885 6667778877764 899999999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 302 QNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 302 ~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
.+ +++|+++|+++++.++++
T Consensus 229 ~~-------l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 229 YP-------LAPTLARANQWLNMAVAE 248 (282)
T ss_dssp CC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999999888875
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.76 E-value=6.1e-18 Score=151.55 Aligned_cols=165 Identities=13% Similarity=0.063 Sum_probs=123.3
Q ss_pred cCccEEEEccccccCchhHHHHHHHHHHHHHcC------CeEEEcCCCCCC--CCCCHHHHHHHHHHhhhcCcEEEeCHH
Q 018696 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG------SILSYDPNLRLP--LWPSEEAAREGIMSIWDQADIIKVSDD 224 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~------~~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~dvl~~N~~ 224 (351)
.++|++..+.+ .+....+.+.++++..++.+ .++++||..... +|. .+...+.++++++++|+++||..
T Consensus 75 ~~~daV~tG~l--~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~-~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGYI--NNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYC-KKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECCC--CCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeec-CHHHHHHHHHHhhhCCEecCCHH
Confidence 46788766543 34445677778888877655 799999976543 553 34556667779999999999999
Q ss_pred HHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcc-------eEEEec------CceeeecCcccccccCCCCchH
Q 018696 225 EITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKG-------CRYYTK------EFKGRVPGVKTKAVDTTGAGDS 289 (351)
Q Consensus 225 E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G-------~~~~~~------~~~~~v~~~~~~~vd~tGaGD~ 289 (351)
|++.|+|.... ++..+++++|.+.|++.|+||.|..| +++..+ ++.++++.+.++. +++|+||+
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 99999997643 34455678888999999999999987 333334 4667777777766 89999999
Q ss_pred HHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 290 FVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 290 f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|.|+|+++| +|.+ +++|+++|.+....+++..
T Consensus 231 fsaal~a~l-~g~~-------~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 231 FAACLLAFS-HSHP-------MDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp HHHHHHHHH-TTSC-------HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-cCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 999999999 9999 9999999999977777653
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.60 E-value=1.7e-14 Score=127.30 Aligned_cols=164 Identities=16% Similarity=0.070 Sum_probs=114.2
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHh
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEIT 227 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~ 227 (351)
+.++.++++++..-. ..+...+.+.++++.+++.+.++++||..... .. ...+...++++ ++|+|+||..|+.
T Consensus 54 ~~~~~a~~lvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~~-~~~~~~~~ll~~~~~~vitPN~~E~~ 128 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-LSKESVEAMIIAGKSANEHGVPVILDPVGAGA---TP-FRTESARDIIREVRLAAIRGNAAEIA 128 (272)
T ss_dssp HHHHHSSEEEEECTT-CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---BH-HHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhCCEEEEECCC-CCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---cc-chHHHHHHHHccCCCeEECCCHHHHH
Confidence 345667877663222 23344577788888888999999999964321 11 11233445666 8999999999999
Q ss_pred hhcCCC-C----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHH
Q 018696 228 FLTGGD-D----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILN 296 (351)
Q Consensus 228 ~l~~~~-~----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~ 296 (351)
.|+|.. . .++..+.+++|.+.+...|++| |..+ ++.++++.++++.....+.|++|+||+|.|.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa 206 (272)
T 1ekq_A 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (272)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHH
Confidence 999865 2 2233455677766544455555 9887 4556667788888777788999999999888888
Q ss_pred HHHhcCCcccchHHHHHHHHHHHH----HHhHHhc
Q 018696 297 CLAADQNLIKDENRLREALLFANA----CGALTVT 327 (351)
Q Consensus 297 ~l~~g~~~~~~~~~~~~a~~~a~~----~Aa~~i~ 327 (351)
.+++|.+ +.+|+++|+. ++..+.+
T Consensus 207 ~la~g~~-------~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 207 FCAVEEN-------PLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHTTCSS-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHHHHh
Confidence 8888998 9999999986 5544444
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.1e-14 Score=140.82 Aligned_cols=162 Identities=17% Similarity=0.110 Sum_probs=119.9
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCC----CCCCCHHHHHHHHH-HhhhcCcEEEeCHHHHhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL----PLWPSEEAAREGIM-SIWDQADIIKVSDDEITF 228 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~----~~~~~~~~~~~~~~-~~l~~~dvl~~N~~E~~~ 228 (351)
..+.+.++.+ +....+.+.++++..++.+.++++||+... .++ +. +..+.+. ++++.+|+++||..|++.
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~-~~-~~~~~l~~~Ll~~a~iitPN~~Ea~~ 165 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLA-GK-DIVSLITEKVAPFADILTPNIPECYK 165 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC----------CT-THHHHHHHHTGGGCSEECCBHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCC-CH-HHHHHHHHHhhCcceEEecCHHHHHH
Confidence 6788888754 455566677777777666889999997542 222 22 2334444 788999999999999999
Q ss_pred hcCCC----CCChhHHHHHHHhcCCC-eEEEEeeCCcc--------e--EEE--ecCceeeecCcccccccCCCCchHHH
Q 018696 229 LTGGD----DHNDDNVVLEKLFHPNL-KLLIVTEGSKG--------C--RYY--TKEFKGRVPGVKTKAVDTTGAGDSFV 291 (351)
Q Consensus 229 l~~~~----~~~~~~~~~~~l~~~g~-~~vvvt~G~~G--------~--~~~--~~~~~~~v~~~~~~~vd~tGaGD~f~ 291 (351)
|+|.. +.++..+++++|.+.|. +.||||.|..+ + +++ .+++.++++.+.++.+|++|+||+|.
T Consensus 166 L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fs 245 (550)
T 3rm5_A 166 LLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLA 245 (550)
T ss_dssp HHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHH
Confidence 99963 22345567788888876 79999998763 3 455 34567778888888899999999999
Q ss_pred HHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhc
Q 018696 292 SGILNCLAADQNLIKDENRLREALLFANACGALTVT 327 (351)
Q Consensus 292 ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~ 327 (351)
|+++++|++|.+ +++|+++|+......++
T Consensus 246 aaiaa~La~G~~-------l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 246 SAIASNLARGYS-------LPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999965444443
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.22 E-value=8.8e-11 Score=102.91 Aligned_cols=156 Identities=16% Similarity=0.077 Sum_probs=104.9
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHhh
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITF 228 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~ 228 (351)
+.++.++.+.+..-. ..+...+.+..+++.+++.+.++++||..... +. ...+....+++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~---~~-~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEECC-CCHHHHHHHHHHHHHHHHcCCcEEEcCccccc---cc-cCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 456778888775332 23333456667788888899999999964321 11 11222334443 39999999999999
Q ss_pred hcCCCC----------C-ChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHH
Q 018696 229 LTGGDD----------H-NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNC 297 (351)
Q Consensus 229 l~~~~~----------~-~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~ 297 (351)
|+|... . ++....++++.+.+...|++| |..+. ++++++.+.++.......+++|+||+|.|.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHH
Confidence 987541 1 233455777776555556666 87775 4566677777776656679999999999999999
Q ss_pred HHhcCCcccchHHHHHHHHHHHH
Q 018696 298 LAADQNLIKDENRLREALLFANA 320 (351)
Q Consensus 298 l~~g~~~~~~~~~~~~a~~~a~~ 320 (351)
+++|.+ .+|+..|..
T Consensus 205 lA~g~~--------~~Aa~~a~~ 219 (265)
T 1v8a_A 205 VAVTEP--------LKATTSALV 219 (265)
T ss_dssp HTTSCH--------HHHHHHHHH
T ss_pred HhcCCC--------HHHHHHHHH
Confidence 999873 455555554
No 63
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.11 E-value=9e-10 Score=98.49 Aligned_cols=172 Identities=13% Similarity=0.065 Sum_probs=103.5
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHh-h-hcCcEEEeCHHHHhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-W-DQADIIKVSDDEITF 228 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~-l-~~~dvl~~N~~E~~~ 228 (351)
.++..+.+.++.-...++...+.+.++++..+ .+.++++|+. .......-.++ + +..++|+||..|++.
T Consensus 122 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 122 QITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGS--------AINLLAKRKPAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETH--------HHHHHHHCC-CCCSCSCEEEECCSCC-CT
T ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCC--------hhhhhccChhhcCCCCCEEECCcHHHHHH
Confidence 44567888776322223333345555555433 4789999983 11111110011 3 468899999999999
Q ss_pred hcCCCCCC---hh-HHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh-cCC
Q 018696 229 LTGGDDHN---DD-NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA-DQN 303 (351)
Q Consensus 229 l~~~~~~~---~~-~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~-g~~ 303 (351)
|++....+ +. .+.++++.+ + .+|+..| .+.++++ ++..++.....+..+++|+||+|.+.+.+.+++ |.+
T Consensus 193 L~g~~~~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~Lag~iaa~lA~~g~~ 267 (311)
T 3bgk_A 193 LSGLTIPEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTLAGMIAGFVAQFHTD 267 (311)
T ss_dssp TTCCCSTTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHHHHHHHHHHHHCCSC
T ss_pred HhCCCCCcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHHHHHHHHHHHccCCC
Confidence 99876432 22 345666666 5 3566666 4566666 444455566677889999999984444444568 999
Q ss_pred cccchHHHHHHHHHHHHHHhHHhcc---cCCCCCCCCHHHHHHHHh
Q 018696 304 LIKDENRLREALLFANACGALTVTE---RGAIPALPTKEAALKLLH 346 (351)
Q Consensus 304 ~~~~~~~~~~a~~~a~~~Aa~~i~~---~g~~~~~~~~~~v~~~l~ 346 (351)
+.+|+++|+.+.+.+-+. .| . + ....+|.+.|.
T Consensus 268 -------~~eA~~~A~~~~~~ag~~a~~~g-~-~-~~a~dl~~~l~ 303 (311)
T 3bgk_A 268 -------RFEVAAAAVFLHSYIADQLSKEA-Y-V-VLPTRISAEIT 303 (311)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHTTC-S-S-CCHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhhC-C-C-CCHHHHHHHHH
Confidence 999999997666654332 24 2 3 35666655543
No 64
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.06 E-value=2.2e-09 Score=95.97 Aligned_cols=169 Identities=12% Similarity=-0.006 Sum_probs=101.8
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh--hcCcEEEeCHHHHhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW--DQADIIKVSDDEITF 228 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l--~~~dvl~~N~~E~~~ 228 (351)
.++.++.+.++.-...+....+.+.++++..+ .+.++++||. .......-.+++ +..+||+||..|++.
T Consensus 108 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~~l~~~~~~viTPN~~E~~~ 178 (310)
T 2r3b_A 108 VVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGS--------AITLFSQGNFSLTYPEKVVFTPHQMEWQR 178 (310)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETH--------HHHHHHHTTCCCSSGGGEEEECCHHHHHH
T ss_pred HhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCC--------cchhcccchhhhcCCCCEEEcCCHHHHHH
Confidence 34567888776322223333345555555433 5789999983 111111100112 467899999999999
Q ss_pred hcCCCCCC---hh-HHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCc
Q 018696 229 LTGGDDHN---DD-NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNL 304 (351)
Q Consensus 229 l~~~~~~~---~~-~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~ 304 (351)
|++....+ +. .++++++ ++ +|+..|. +.++++ ++..++.....+..+++|+||+|.+.+.+.+++|.+
T Consensus 179 L~g~~~~~~~~~~a~~aA~~l---g~--~VvlKG~-~~vi~~-~~~~~~~~~g~~~~~t~GtGD~Lag~Iaa~lA~g~~- 250 (310)
T 2r3b_A 179 LSHLPIEQQTLANNQRQQAKL---GS--TIVLKSH-RTTIFH-AGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQFKP- 250 (310)
T ss_dssp HHCCCGGGCCHHHHHHHHHHH---TS--EEEECST-TCEEEC-SSSCEECCCCCGGGCSTTHHHHHHHHHHHHHHHSCS-
T ss_pred HhCCCCCcccchHHHHHHHHh---Cc--EEEEeCC-ceEEEE-CCEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC-
Confidence 99875432 22 4456666 54 5666664 555665 433455555667788999999975555555569999
Q ss_pred ccchHHHHHHHHHHHHHHhHHhcc---cCCCCCCCCHHHHHHHH
Q 018696 305 IKDENRLREALLFANACGALTVTE---RGAIPALPTKEAALKLL 345 (351)
Q Consensus 305 ~~~~~~~~~a~~~a~~~Aa~~i~~---~g~~~~~~~~~~v~~~l 345 (351)
+.+|++.|+.+.+..-+. .| ++ ....+|.+.|
T Consensus 251 ------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l 285 (310)
T 2r3b_A 251 ------TIETIAGAVYLHSLIGDDLAKTD--YV-VLPTKISQAL 285 (310)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHTTTC--SS-CCHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHH
Confidence 899999887666654331 24 23 3555665544
No 65
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.02 E-value=1.8e-08 Score=87.95 Aligned_cols=159 Identities=14% Similarity=0.039 Sum_probs=106.3
Q ss_pred hhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh-hcCcEEEeCHHHHh
Q 018696 149 KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVSDDEIT 227 (351)
Q Consensus 149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~ 227 (351)
.+..+.++.+.+.--. ..+...+.+...++.+++.+.|+++||..... +.. ..+....++ .++++|.+|..|+.
T Consensus 53 ~e~~~~a~alvIn~G~-l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s~~-r~~~~~~Ll~~~~~VItpN~~E~~ 127 (273)
T 3dzv_A 53 PQMFQQTSALVLNLGH-LSQEREQSLLAASDYARQVNKLTVVDLVGYGA---SDI-RNEVGEKLVHNQPTVVKGNLSEMR 127 (273)
T ss_dssp HHHHTTCSEEEEECCS-CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---CHH-HHHHHHHHHHTCCSEEEEEHHHHH
T ss_pred HHHHHHCCeEEEecCC-CChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---ccc-CHHHHHHHHhcCCcEECCCHHHHH
Confidence 3456777887765433 33434567777888899999999999964321 111 112222222 37899999999999
Q ss_pred hhcCCCCC----C------------hhHHHHHHHhcCCC-eEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHH
Q 018696 228 FLTGGDDH----N------------DDNVVLEKLFHPNL-KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSF 290 (351)
Q Consensus 228 ~l~~~~~~----~------------~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f 290 (351)
.|+|.... + +....++++.+... ..|++|- ... +++++++.+.++.-....-.++|.||++
T Consensus 128 ~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG-~~D-~i~dg~~~~~~~~G~~~~~~v~GtGc~L 205 (273)
T 3dzv_A 128 TFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATG-IQD-VLVSQEQVIVLQNGVPELDCFTGTGDLV 205 (273)
T ss_dssp HHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEES-SSE-EEECSSCEEEECCCCGGGGSSTTHHHHH
T ss_pred HHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEEC-Cee-EEEcCCEEEEeCCCCcccCCcCCchHHH
Confidence 99986521 1 22345667766544 5566654 433 4455556667766555556679999999
Q ss_pred HHHHHHHHHhcCCcccchHHHHHHHHHHHHH
Q 018696 291 VSGILNCLAADQNLIKDENRLREALLFANAC 321 (351)
Q Consensus 291 ~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 321 (351)
.|.+.+.+++|.+ +.+|+..|...
T Consensus 206 s~~Iaa~lA~g~~-------~~~Aa~~A~~~ 229 (273)
T 3dzv_A 206 GALVAALLGEGNA-------PMTAAVAAVSY 229 (273)
T ss_dssp HHHHHHHHHHTCC-------HHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC-------HHHHHHHHHHH
Confidence 9999999999998 88888877654
No 66
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.75 E-value=1e-07 Score=83.57 Aligned_cols=170 Identities=15% Similarity=0.086 Sum_probs=106.3
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcC
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 231 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 231 (351)
++.+|++.++.-.-.+ +...++++.+.+.+.++++|...... +.+ ......+||+||..|++.|++
T Consensus 96 l~~~davviGPGlg~~----~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l-~~~~~~~vlTPN~~E~~~L~g 161 (279)
T 3rpz_A 96 EETYRAIAIGPGLPQT----ESVQQAVDHVLTADCPVILDAGALAK---------RTY-PKREGPVILTPHPGEFFRMTG 161 (279)
T ss_dssp SSCCSEEEECTTCCCC----HHHHHHHHHHTTSSSCEEECGGGCCS---------CCC-CCCSSCEEECCCHHHHHHHHC
T ss_pred ccCCCEEEECCCCCCC----HHHHHHHHHHHhhCCCEEEECCccch---------hhh-hhccCCEEEecCHHHHHHHhC
Confidence 4678888886432121 23345556666678899999742210 000 012467899999999999999
Q ss_pred CCCC---ChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccch
Q 018696 232 GDDH---NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 308 (351)
Q Consensus 232 ~~~~---~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~ 308 (351)
.... ++....++++.+.+.. +|+-.|. +.+++++++.+++........+++|+||++.+.+.+.+++|.+
T Consensus 162 ~~~~~~~~d~~~aa~~la~~~~~-~VvlKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~----- 234 (279)
T 3rpz_A 162 VPVNELQKKRAEYAKEWAAQLQT-VIVLKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED----- 234 (279)
T ss_dssp CCHHHHTTSHHHHHHHHHHHHTS-EEEECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS-----
T ss_pred CCccchHHHHHHHHHHHHHHcCe-EEEEeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC-----
Confidence 7632 2334456666653322 5555565 3455565545556555566788999999986666666779998
Q ss_pred HHHHHHHHHHHH----HHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 309 NRLREALLFANA----CGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 309 ~~~~~a~~~a~~----~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+.+|+..|+. ++-...++.|.. + ....||.+.+.
T Consensus 235 --~~~A~~~a~~lh~~Ag~~a~~~~g~~-~-~~a~dl~~~lp 272 (279)
T 3rpz_A 235 --PKHAVLNAVYLHGACAELWTDEHSAH-T-LLAHELSDILP 272 (279)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHSCTT-S-CCHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHH
Confidence 9999998874 444445555543 2 35666666553
No 67
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.72 E-value=5.1e-07 Score=83.96 Aligned_cols=167 Identities=11% Similarity=0.065 Sum_probs=99.3
Q ss_pred cccCCChHHHHHHHHHHcCC-CeEEEeecCCChHHHHHHHHHHHCCCCCC-----Ce---e----ecCCCCCeEEEEEEe
Q 018696 57 KKAPGGAPANVAVGISRLGG-SSAFVGKLGDDEFGYMLANILKENNVDTS-----GV---R----YDSTARTALAFVTLR 123 (351)
Q Consensus 57 ~~~~GG~~~n~a~~l~~lG~-~v~~v~~vG~D~~g~~i~~~l~~~gid~~-----~v---~----~~~~~~t~~~~~~~~ 123 (351)
..+.||.+.-+|..|+++|. +|.+.+..+..... +.| ..+|-.- -+ . +.++.+.-..+++..
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk~~~----~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~Ey 187 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPKRLA----ELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIFEF 187 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCHHHH----TTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEEEE
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCHHHH----Hhc-CCcceeecccCCceeecCchhhhccCCCCCcEEEEEc
Confidence 56899999999999999999 58888877764333 333 1111110 00 0 011122333333333
Q ss_pred cCCC--------------ceEEEe-cCCcccccCCccccch---hhhcCccEEEEccccccCc-----hh----HHHHHH
Q 018696 124 ADGE--------------REFLFF-RHPSADMLLCESELDK---NLIKQGSIFHYGSISLIAE-----PC----RSTQLA 176 (351)
Q Consensus 124 ~~g~--------------~~~~~~-~~~~~~~~~~~~~i~~---~~i~~~~~~~~~~~~~~~~-----~~----~~~~~~ 176 (351)
..|. +++++. +..+.......+.+.. +.-+..|.+.++|+..+.+ .. .+...+
T Consensus 188 ~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e 267 (474)
T 3drw_A 188 RKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKE 267 (474)
T ss_dssp CTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHHHH
T ss_pred CCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHHHH
Confidence 3332 233332 2222201222233321 2223689999999998766 11 223334
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCC
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGG 232 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~ 232 (351)
.++..+..++++-+...+. .+.+-....+..+++++|.+-+|++|+..+.+.
T Consensus 268 ~i~~l~~~~~~iH~E~As~----~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 268 DIIEFKEKDVKIHVEFASV----QDRKLRKKIITNILPFVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp HHHHHHHTTCEEEEECCCC----SCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEeCcc----ccHHHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence 5555567899999998754 356666677778999999999999999987653
No 68
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.71 E-value=1.1e-07 Score=90.40 Aligned_cols=173 Identities=13% Similarity=0.034 Sum_probs=106.5
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
+.++.++++.++.-....+...+. +.+.+++.+.++++|+..... . . .+.+ +..+..++|+||..|+..|
T Consensus 316 ~~~~~~davviGpGlg~~~~~~~~---~~~~l~~~~~pvVlDadgl~~-l-~----~~ll-~~~~~~~vlTPN~~E~~~L 385 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNEHVREF---VNEFLKTLEKPAVIDADAINV-L-D----TSVL-KERKSPAVLTPHPGEMARL 385 (502)
T ss_dssp HHHTTCSEEEECTTCCCSHHHHHH---HHHHHHHCCSCEEECHHHHHT-C-C----HHHH-HHCSSCEEECCCHHHHHHH
T ss_pred HHhccCCEEEEeCCCCCCHHHHHH---HHHHHHhcCCCEEEeCcccch-h-c----HHHH-hccCCCEEEeCCHHHHHHH
Confidence 456788998887432222211222 222445668999999842110 0 0 1122 1234678999999999999
Q ss_pred cCCCCC---ChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCccc
Q 018696 230 TGGDDH---NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIK 306 (351)
Q Consensus 230 ~~~~~~---~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~ 306 (351)
+|.... ++ ...++++.+.+- .+|+..|.. .+++++++.+ +........+++|+||+|++.+.+.+++|.+
T Consensus 386 ~g~~~~~~~~d-~~aa~~la~~~~-~~VvlKG~~-~vi~~~~~~~-~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~--- 458 (502)
T 3rss_A 386 VKKTVGDVKYN-YELAEEFAKEND-CVLVLKSAT-TIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLS--- 458 (502)
T ss_dssp HTCCHHHHTTC-HHHHHHHHHHHT-SEEEECSSS-EEEECSSCEE-EECCCCGGGSSTTHHHHHHHHHHHHHHTTCC---
T ss_pred hCCCccchHHH-HHHHHHHHHHcC-CEEEEeCCC-eEEEcCCEEE-EECCCCCccccCCchHHHHHHHHHHHhCCCC---
Confidence 986531 22 445666665432 256667764 4455555443 4444556788999999998888888889999
Q ss_pred chHHHHHHHHHHHHHHhHHhccc--CCCCCCCCHHHHHHHH
Q 018696 307 DENRLREALLFANACGALTVTER--GAIPALPTKEAALKLL 345 (351)
Q Consensus 307 ~~~~~~~a~~~a~~~Aa~~i~~~--g~~~~~~~~~~v~~~l 345 (351)
+.+|+.+|+...+.+-+.. +.. + ....+|.+.+
T Consensus 459 ----~~~Aa~~A~~~hg~Ag~~aa~g~~-~-~~a~dl~~~l 493 (502)
T 3rss_A 459 ----PLEASTVSVYLHGFAAELFEQDER-G-LTASELLRLI 493 (502)
T ss_dssp ----HHHHHHHHHHHHHHHHHTCSSCGG-G-CCHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHH
Confidence 9999999987766653332 322 2 3566665554
No 69
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.53 E-value=4.8e-07 Score=84.29 Aligned_cols=163 Identities=10% Similarity=0.109 Sum_probs=98.2
Q ss_pred ccCCChHHHHHHHHHHcCCCeEE--EeecCCChHHHHHHHHHHHCCCCCCCee--e---------cCCCCCeEEEEEEec
Q 018696 58 KAPGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTSGVR--Y---------DSTARTALAFVTLRA 124 (351)
Q Consensus 58 ~~~GG~~~n~a~~l~~lG~~v~~--v~~vG~D~~g~~i~~~l~~~gid~~~v~--~---------~~~~~t~~~~~~~~~ 124 (351)
.+.||.+..+|..|+.+|.++.+ ++.+|.. +.+.|...+|..-.+. . ....+....+++...
T Consensus 108 ~~~GGnA~imAn~la~lg~~~vl~~~~~l~~~-----~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef~ 182 (455)
T 1ua4_A 108 LRMGGQAGIMANLLGGVYGVPVIVHVPQLSRL-----QANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYEFP 182 (455)
T ss_dssp EEEESHHHHHHHHHTTTTCCCEEECCSCCCHH-----HHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEEEC
T ss_pred cccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH-----HHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEEcC
Confidence 38999999999999999999988 7777753 3333432223220000 0 113345555555555
Q ss_pred CCC----------ceEEEecCCcccccCCccccchhhh----cCccEEEEccccccCchh----HHHHHHHHHHHHHcCC
Q 018696 125 DGE----------REFLFFRHPSADMLLCESELDKNLI----KQGSIFHYGSISLIAEPC----RSTQLAAMNLAKESGS 186 (351)
Q Consensus 125 ~g~----------~~~~~~~~~~~~~~~~~~~i~~~~i----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~~~ 186 (351)
.|+ ++++...+.........+.+. +.+ ..+|.+.++|+..+.+.. .+...+.++.....+.
T Consensus 183 ~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~-~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~ 261 (455)
T 1ua4_A 183 RGFRVFEFEAPRENRFIGSADDYNTTLFIREEFR-ESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREI 261 (455)
T ss_dssp TTCEETTEECSSCEEEEEECCSSGGGTCCCGGGS-TTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCeecceeccccceeEEecCCCcccCcccHHHH-HHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCc
Confidence 554 234333222222222233332 233 459999999998876532 2222222223366789
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcC
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 231 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 231 (351)
++-++..+.. +.+.....+ .+++++|.+-+|++|+..+..
T Consensus 262 ~iH~ElAs~~----~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~ 301 (455)
T 1ua4_A 262 PVHLEFAFTP----DEKVREEIL-NVLGMFYSVGLNEVELASIME 301 (455)
T ss_dssp CEEEECCCCC----CHHHHHHHH-HHGGGCSEEEECHHHHHHHHH
T ss_pred eEEEEeCCcc----CHHHHHHHH-hhhccCcccccCHHHHHHHHH
Confidence 9999987643 454556666 999999999999999987643
No 70
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.38 E-value=1.9e-05 Score=75.61 Aligned_cols=156 Identities=17% Similarity=0.009 Sum_probs=99.7
Q ss_pred hhhcC-ccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHH
Q 018696 150 NLIKQ-GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEI 226 (351)
Q Consensus 150 ~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~ 226 (351)
+..+. ++.+.+.--++ .+ .+.+..+.+.+++.+.|+++||..... +. ...+...++++ +.+||.+|..|+
T Consensus 301 e~~~~~~~alvin~G~l-~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a---~~-~r~~~~~~Ll~~~~~~vItpN~~E~ 373 (540)
T 3nl6_A 301 DLAAIPHATLLLNTGSV-AP--PEMLKAAIRAYNDVKRPIVFDPVGYSA---TE-TRLLLNNKLLTFGQFSCIKGNSSEI 373 (540)
T ss_dssp HHTTSTTCEEEEESSCS-CC--HHHHHHHHHHHHTTTCCEEEECTTCTT---SH-HHHHHHHHHTTSCCCSEEEECHHHH
T ss_pred HHHhccCCeEEEeCCCC-CH--HHHHHHHHHHHHHcCCCEEEChHHhhc---cc-ccHHHHHHHHhhCCCeEECCCHHHH
Confidence 34555 77776654332 22 677888888899999999999964322 21 12344456666 799999999999
Q ss_pred hhhcCCCC-------------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEec-------------------Cceeeec
Q 018696 227 TFLTGGDD-------------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK-------------------EFKGRVP 274 (351)
Q Consensus 227 ~~l~~~~~-------------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~-------------------~~~~~v~ 274 (351)
..|+|... .++....++++.+..-. +|+-.|+.-. +.++ +..+.++
T Consensus 374 ~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~-vVvlkG~~D~-I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (540)
T 3nl6_A 374 LGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKT-VAVCTGEFDF-IADGTIEGKYSLSKGTNGTSVEDIPCVAVE 451 (540)
T ss_dssp HHHTTC--------------CCHHHHHHHHHHHHHTTS-EEEECSSSEE-EEECCGGGBCCSSSCCSSCCTTSSCEEEEE
T ss_pred HHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCC-EEEEcCCCeE-EECCCccccccccccccccccCCccEEEEC
Confidence 99998542 12333456677664433 4444555444 3344 3445555
Q ss_pred Ccc-cccccCCCCchHHHHHHHHHHHhcC---CcccchHHHHHHHHHHHHH
Q 018696 275 GVK-TKAVDTTGAGDSFVSGILNCLAADQ---NLIKDENRLREALLFANAC 321 (351)
Q Consensus 275 ~~~-~~~vd~tGaGD~f~ag~~~~l~~g~---~~~~~~~~~~~a~~~a~~~ 321 (351)
.-. .-.-.++|.||++.+.+.+.++.+. + +.+|+..|+..
T Consensus 452 ~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~-------~~~Aa~~a~~~ 495 (540)
T 3nl6_A 452 AGPIEIMGDITASGCSLGSTIACMIGGQPSEGN-------LFHAVVAGVML 495 (540)
T ss_dssp CSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCB-------HHHHHHHHHHH
T ss_pred CCChhhccCccCchHHHHHHHHHHHhcCcCCCC-------HHHHHHHHHHH
Confidence 444 2334469999999998888888887 5 66776666543
No 71
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.26 E-value=3.7e-05 Score=66.47 Aligned_cols=155 Identities=15% Similarity=0.059 Sum_probs=89.9
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh-hcCcEEEeCHHHHhhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVSDDEITFL 229 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~l 229 (351)
..+.++.+.+.--+ +.+...+.+....+.+++.+.|+++||..... +.-+ .+...+++ .++++|.+|..|...|
T Consensus 53 ~~~~a~al~iNiGt-l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga---s~~R-~~~~~~ll~~~~~vIrgN~sEi~~L 127 (265)
T 3hpd_A 53 MIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TKFR-TRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BHHH-HHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHCCeEEEECCC-CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC---cHHH-HHHHHHHHhcCCcEEcCCHHHHHHH
Confidence 34445555443221 23444566777888899999999999954321 1111 12222222 3789999999999999
Q ss_pred cCCCC-----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHH
Q 018696 230 TGGDD-----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCL 298 (351)
Q Consensus 230 ~~~~~-----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l 298 (351)
.|... .++....++.+.+..-. +|+-.|+.- ++.++++.+.++.-..-.-..+|.||++.+.+.+.+
T Consensus 128 ~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~-vVvlkG~~d-~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~l 205 (265)
T 3hpd_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNT-TVAVTGAVD-YVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFV 205 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHHHTTS-EEEEESSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHH
T ss_pred hcccCCCCCccCccccHHHHHHHHHHHHHHhCC-EEEEeCCCe-EEEcCCEEEEECCCChHhhcCCccchHHHHHHHHHH
Confidence 86321 12233455566553322 444456644 344555666555444344445899999877666666
Q ss_pred HhcCCcccchHHHHHHHHHHHH
Q 018696 299 AADQNLIKDENRLREALLFANA 320 (351)
Q Consensus 299 ~~g~~~~~~~~~~~~a~~~a~~ 320 (351)
+++ + +.+|...|+.
T Consensus 206 A~~-~-------~~~Aa~~a~~ 219 (265)
T 3hpd_A 206 AVT-E-------PLKATTSALV 219 (265)
T ss_dssp TTS-C-------HHHHHHHHHH
T ss_pred hcC-C-------hHHHHHHHHH
Confidence 666 4 4556555553
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.16 E-value=1.2e-05 Score=74.68 Aligned_cols=160 Identities=11% Similarity=0.152 Sum_probs=92.3
Q ss_pred cCCChHHHHHHHHHHcCCCeEE--EeecCCChHHHHHHHHHHHCCCCCC----C-eee------cCCCCCeEEEEEEecC
Q 018696 59 APGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTS----G-VRY------DSTARTALAFVTLRAD 125 (351)
Q Consensus 59 ~~GG~~~n~a~~l~~lG~~v~~--v~~vG~D~~g~~i~~~l~~~gid~~----~-v~~------~~~~~t~~~~~~~~~~ 125 (351)
+.||.+.-+|..|+.+|.++.+ ++.+|. ...+.|...+|..- + +.. ..+.+.-..+++....
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~~ 186 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE-----LQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFPR 186 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH-----HHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCEECT
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH-----HHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEEcCC
Confidence 8999999999999999999987 566554 23334431222100 0 000 0011223333333333
Q ss_pred CC----------ceEEEecCC-cccccCCccccc---hhhhcCccEEEEccccccCch---h-HHHHHHHHHHHHHcCCe
Q 018696 126 GE----------REFLFFRHP-SADMLLCESELD---KNLIKQGSIFHYGSISLIAEP---C-RSTQLAAMNLAKESGSI 187 (351)
Q Consensus 126 g~----------~~~~~~~~~-~~~~~~~~~~i~---~~~i~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~a~~~~~~ 187 (351)
|. ++++...++ +..... .+.+. .+.....|.+.++|+..+.+. . .+...+.++.....+++
T Consensus 187 G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~ 265 (457)
T 1l2l_A 187 NFKVLDFEAPRENRFIGAADDYNPILYV-REEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIR 265 (457)
T ss_dssp TCEETTEECSSCEEEEEEECSSGGGTCC-CHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeecceecCCCCeEEEEcCCCCCCCcc-cHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCe
Confidence 32 344333222 222222 22222 123356999999999887651 1 12222333344678899
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 188 LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 188 v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
+-+...+. .+.+-....+ .+++++|.+-+|++|+..+
T Consensus 266 iH~E~As~----~~~~l~~~i~-~ilp~vDSlGmNEqELa~l 302 (457)
T 1l2l_A 266 AHLEFAFT----PDEVVRLEIV-KLLKHFYSVGLNEVELASV 302 (457)
T ss_dssp EEEECCCC----SSHHHHHHHH-HHGGGCSEEEECHHHHHHH
T ss_pred EEEEECCc----ccHHHHHHHH-hhccccccCccCHHHHHHH
Confidence 99998764 3455566677 9999999999999999874
No 73
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=98.08 E-value=4.9e-05 Score=70.76 Aligned_cols=161 Identities=7% Similarity=0.100 Sum_probs=93.5
Q ss_pred cCCChHHHHHHHHHHcCCCeEE--EeecCCChHHHHHHHHHHHCCCCCC-----Ceee------cCCCCCeEEEEEEecC
Q 018696 59 APGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTS-----GVRY------DSTARTALAFVTLRAD 125 (351)
Q Consensus 59 ~~GG~~~n~a~~l~~lG~~v~~--v~~vG~D~~g~~i~~~l~~~gid~~-----~v~~------~~~~~t~~~~~~~~~~ 125 (351)
+.||.+.-+|..|+.+|.++.+ ++.+|. .+.+.|...+|..- .+.. ..+.+.-..+++....
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~~ 191 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPK-----LQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFPR 191 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCH-----HHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEECS
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCH-----HHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEEcCC
Confidence 9999999999999999999988 666554 23334432222110 0000 0012344444444444
Q ss_pred CC----------ceEEEecCCcccccCCccccc---hhhhcCccEEEEccccccCc-----hhHHH-HHH---HHHHHHH
Q 018696 126 GE----------REFLFFRHPSADMLLCESELD---KNLIKQGSIFHYGSISLIAE-----PCRST-QLA---AMNLAKE 183 (351)
Q Consensus 126 g~----------~~~~~~~~~~~~~~~~~~~i~---~~~i~~~~~~~~~~~~~~~~-----~~~~~-~~~---~~~~a~~ 183 (351)
|. ++++...++........+.+. .+.....|.+.++|+..+.+ ...+. +.+ .++....
T Consensus 192 G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~ 271 (467)
T 1gc5_A 192 GFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNR 271 (467)
T ss_dssp SCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHH
T ss_pred CCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcC
Confidence 43 344433222111111222221 12235699999999987665 21222 222 2333255
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
.++++-+...+. .+.+-....+ .+++++|.+-+|++|+..+
T Consensus 272 ~~~~iH~E~As~----~~~~l~~~i~-~ilp~vDSlGmNEqELa~l 312 (467)
T 1gc5_A 272 YNVKSHFEFAYT----ANRRVREALV-ELLPKFTSVGLNEVELASI 312 (467)
T ss_dssp TTCEEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHH
T ss_pred CCCeEEEEECCc----ccHHHHHHHH-hhccccccCccCHHHHHHH
Confidence 789999998764 3555566677 9999999999999999843
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.34 E-value=0.0013 Score=61.87 Aligned_cols=168 Identities=14% Similarity=0.055 Sum_probs=96.2
Q ss_pred cCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCC
Q 018696 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGG 232 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~ 232 (351)
+.++.+.++.-.-..+ . + +.++++ .+ ++++|..--.. ..+.+.++...||.||..|+..|++.
T Consensus 291 ~~~~a~~iGPGlG~~~-~-~-l~~~l~----~~-p~VlDADaL~~---------~~~~~~~~~~~VlTPh~~E~~rL~g~ 353 (475)
T 3k5w_A 291 NLLSAFALGMGLENIP-K-D-FNRWLE----LA-PCVLDAGVFYH---------KEILQALEKEAVLTPHPKEFLSLLNL 353 (475)
T ss_dssp SSCSEEEECTTCSSCC-T-T-HHHHHH----HS-CEEEEGGGGGS---------GGGGTTTTSSEEEECCHHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCCH-H-H-HHHHHh----cC-CEEEECcccCC---------chhhhccCCCEEECCCHHHHHHHhCC
Confidence 5678887765432222 1 2 333332 34 99999632100 01122344568999999999999875
Q ss_pred -----CCCC---hhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCc
Q 018696 233 -----DDHN---DDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNL 304 (351)
Q Consensus 233 -----~~~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~ 304 (351)
...+ +....++++.+.....+|+-.|..-. +..+++.+ +.........+.|.||++++.+.+.+++|.+
T Consensus 354 ~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~~v-I~~~~~~~-~~~~g~~~mat~GtGdvLsg~Iaa~lA~g~~- 430 (475)
T 3k5w_A 354 VGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTL-IAHQGQVF-INILGSVALAKAGSGDVLAGLILSLLSQNYT- 430 (475)
T ss_dssp TSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSSEE-EEETTEEE-EECCCCGGGCSTTHHHHHHHHHHHHHHTTCC-
T ss_pred ccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCCCE-EECCCEEE-EECCCCCCCCCCCHHHHHHHHHHHHHHcCCC-
Confidence 2211 22334566665441334444555443 34444443 3333334556899999999999999999998
Q ss_pred ccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHhh
Q 018696 305 IKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHT 347 (351)
Q Consensus 305 ~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~~ 347 (351)
+.+|+..|...-+.+-+......+ ....||.+.+.+
T Consensus 431 ------~~~Aa~~a~~lhg~ag~~a~~~~~-~~a~dl~~~l~~ 466 (475)
T 3k5w_A 431 ------PLDAAINASLAHALASLEFKNNYA-LTPLDLIEKIKQ 466 (475)
T ss_dssp ------HHHHHHHHHHHHHHGGGGCSSTTC-CCHHHHHHHHHT
T ss_pred ------HHHHHHHHHHHHHHHHHHhccCCC-cCHHHHHHHhhh
Confidence 888888776554444333211113 467777776653
No 75
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=65.02 E-value=6.6 Score=32.83 Aligned_cols=50 Identities=6% Similarity=0.040 Sum_probs=36.6
Q ss_pred CceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeec
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKL 84 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~v 84 (351)
.++|+|.|..+..-+=.+... ...+.|+.|.-+|.++++.|.+|.+++.-
T Consensus 3 gk~vlVTgG~T~E~IDpVR~I-------tN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSI-------TNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEE-------EECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEeCCCcccccCceeec-------cCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357888888765544332211 13567889999999999999999999853
No 76
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=55.51 E-value=22 Score=30.55 Aligned_cols=41 Identities=17% Similarity=0.115 Sum_probs=28.9
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
.||-|..+|..|++.|.+|.+++. +....+.+.+.++..|.
T Consensus 40 s~gIG~~la~~l~~~G~~V~~~~r--~~~~~~~~~~~l~~~~~ 80 (301)
T 3tjr_A 40 ASGIGLATATEFARRGARLVLSDV--DQPALEQAVNGLRGQGF 80 (301)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEEC--CHHHHHHHHHHHHhcCC
Confidence 578899999999999999888764 22234455556665543
No 77
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=50.89 E-value=15 Score=30.41 Aligned_cols=48 Identities=13% Similarity=0.103 Sum_probs=35.4
Q ss_pred CceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEe
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVG 82 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~ 82 (351)
.++++|.|..+.+-+=.+... ...+.||.|.-+|..+++.|.+|.+++
T Consensus 8 gk~vlVTgG~T~E~iDpVR~i-------tN~SSg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYI-------SDHSSGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEE-------EECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCCcccCceeec-------cCCCccHHHHHHHHHHHHCCCEEEEEE
Confidence 357899998765554322211 135679999999999999999999985
No 78
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=47.96 E-value=15 Score=33.16 Aligned_cols=23 Identities=17% Similarity=0.141 Sum_probs=18.8
Q ss_pred CChHHHHHHHHHHcCCCeEEEee
Q 018696 61 GGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 61 GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
|=.|.-+|..|++.|.+|.++=.
T Consensus 32 G~aGl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 32 GIGGLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHHHHHHHHHHHhCCCCEEEEeC
Confidence 33478899999999999988864
No 79
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=47.76 E-value=15 Score=35.29 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=25.3
Q ss_pred CChHHHHHHHHHHcCCCeEEEeec-------CCChHHHHHHHHHHHCCC
Q 018696 61 GGAPANVAVGISRLGGSSAFVGKL-------GDDEFGYMLANILKENNV 102 (351)
Q Consensus 61 GG~~~n~a~~l~~lG~~v~~v~~v-------G~D~~g~~i~~~l~~~gi 102 (351)
|=+|.-+|..|++.|.+|.++-.- |.- ......+.++..|+
T Consensus 32 G~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~-l~p~~~~~l~~lGl 79 (591)
T 3i3l_A 32 GPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGES-LLPGTMSILNRLGL 79 (591)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCB-CCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeee-ECHHHHHHHHHcCC
Confidence 335777888888889888888543 221 22334455666665
No 80
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=38.15 E-value=81 Score=26.52 Aligned_cols=41 Identities=15% Similarity=0.170 Sum_probs=30.0
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
.||-|..+|..|++.|.+|.+++. +....+.+.+.+++.|.
T Consensus 41 s~GIG~aia~~la~~G~~V~~~~r--~~~~~~~~~~~~~~~~~ 81 (276)
T 3r1i_A 41 STGIGKKVALAYAEAGAQVAVAAR--HSDALQVVADEIAGVGG 81 (276)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES--SGGGGHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHHHhcCC
Confidence 467899999999999999988876 22244556666666553
No 81
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=32.89 E-value=51 Score=27.59 Aligned_cols=43 Identities=21% Similarity=0.127 Sum_probs=29.6
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCC-C--hHHHHHHHHHHHCCCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGD-D--EFGYMLANILKENNVD 103 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~-D--~~g~~i~~~l~~~gid 103 (351)
-||.|+-+|+.|++.|.+|.++- ++. . ...+...+.+++.|+.
T Consensus 70 NGGDGlv~AR~L~~~G~~V~v~~-~~~~~~~~~~~~~~~~~~~~g~~ 115 (246)
T 1jzt_A 70 NGGDGLVCARHLKLFGYNPVVFY-PKRSERTEFYKQLVHQLNFFKVP 115 (246)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEC-CCCCTTCHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCeEEEEE-cCCCCCCHHHHHHHHHHHHcCCc
Confidence 58899999999999999998874 332 1 2333445566666653
No 82
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=32.83 E-value=50 Score=28.03 Aligned_cols=42 Identities=12% Similarity=0.029 Sum_probs=27.7
Q ss_pred CChHHHHHHHHHHcCCCeEEEeecCC--ChHHHHHHHHHHHCCCC
Q 018696 61 GGAPANVAVGISRLGGSSAFVGKLGD--DEFGYMLANILKENNVD 103 (351)
Q Consensus 61 GG~~~n~a~~l~~lG~~v~~v~~vG~--D~~g~~i~~~l~~~gid 103 (351)
||.|+-+|+.|+..|.+|.++- ++. ....+...+.+++.|+.
T Consensus 92 GGDGlv~AR~L~~~G~~V~V~~-~~~~~~~~~~~~~~~~~~~g~~ 135 (265)
T 2o8n_A 92 GGDGLVCARHLKLFGYQPTIYY-PKRPNKPLFTGLVTQCQKMDIP 135 (265)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEC-CSCCSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCCcEEEEE-eCCCCCHHHHHHHHHHHHcCCc
Confidence 7788888888888898888763 332 23344445566666654
No 83
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=29.31 E-value=26 Score=26.32 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=31.1
Q ss_pred CChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 61 GGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 61 GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
+|.+...+..|+..|.++.+++.+|..+ .+.|++ ||++
T Consensus 65 ~g~g~~~~~~L~~~gv~~VI~g~iG~~a-----~~~L~~-GI~v 102 (136)
T 2re2_A 65 AARGVFMLKSALDHGANALVLSEIGSPG-----FNFIKN-KMDV 102 (136)
T ss_dssp SCHHHHHHHHHHHTTCSEEEESCCBHHH-----HHHHTT-TSEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhH-----HHHHHC-CCEE
Confidence 6787789999999999999999988643 367888 9863
No 84
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=28.67 E-value=18 Score=17.77 Aligned_cols=8 Identities=63% Similarity=1.003 Sum_probs=6.0
Q ss_pred CCCCCCCC
Q 018696 3 DNHNPTSG 10 (351)
Q Consensus 3 ~~~~~~~~ 10 (351)
..|||||+
T Consensus 17 vqhnppsg 24 (26)
T 3u3c_B 17 VQHNPPSG 24 (26)
T ss_pred hccCCCCC
Confidence 45899985
No 85
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=28.56 E-value=40 Score=28.88 Aligned_cols=24 Identities=17% Similarity=0.144 Sum_probs=19.8
Q ss_pred CCChHHHHHHHHHHcCCCeEEEee
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
.|-.|..+|..|++.|.+|.++-.
T Consensus 30 ~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 30 SGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEECC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEec
Confidence 344678899999999999999876
No 86
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=26.60 E-value=1.5e+02 Score=25.13 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=25.3
Q ss_pred ChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHH
Q 018696 62 GAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (351)
Q Consensus 62 G~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~ 99 (351)
|-|..+|..|++.|.+|.+++.- ....+.+.+..++
T Consensus 43 GIG~~ia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~ 78 (296)
T 3k31_A 43 SLAWGIAKAVCAQGAEVALTYLS--ETFKKRVDPLAES 78 (296)
T ss_dssp SHHHHHHHHHHHTTCEEEEEESS--GGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEEEeCC--hHHHHHHHHHHHh
Confidence 88999999999999998887653 2233444444444
No 87
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=26.37 E-value=59 Score=30.31 Aligned_cols=24 Identities=17% Similarity=0.225 Sum_probs=20.5
Q ss_pred CCChHHHHHHHHHHcCCCeEEEee
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
.|..|.-+|+.|++.|.+|.++-.
T Consensus 49 aG~AGl~AA~~aa~~G~~V~vlEk 72 (510)
T 4at0_A 49 YGIAGVAASIEAARAGADVLVLER 72 (510)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHHHHCCCcEEEEeC
Confidence 567789999999999999999853
No 88
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=26.32 E-value=64 Score=26.10 Aligned_cols=24 Identities=8% Similarity=0.106 Sum_probs=21.5
Q ss_pred CCChHHHHHHHHHHcCCCeEEEee
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
.||-|..++..|.+.|.+|..++.
T Consensus 30 tG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 30 NGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CChHHHHHHHHHHhCCCeEEEEEC
Confidence 588999999999999999988875
No 89
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=25.24 E-value=62 Score=29.51 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=18.5
Q ss_pred CCChHHHHHHHHHHcCCCeEEEee
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
.|.+|.-+|..|++.|.+|.++-.
T Consensus 34 gG~aGl~aA~~la~~G~~V~llEk 57 (447)
T 2i0z_A 34 GGPSGLMAAIGAAEEGANVLLLDK 57 (447)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcHHHHHHHHHHHHCCCCEEEEEC
Confidence 455678888888888888888753
No 90
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=24.71 E-value=2.1e+02 Score=25.16 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=49.1
Q ss_pred CCCeEEEeecCCChHHHHHHHHHHHCCCCC-CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhc
Q 018696 75 GGSSAFVGKLGDDEFGYMLANILKENNVDT-SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIK 153 (351)
Q Consensus 75 G~~v~~v~~vG~D~~g~~i~~~l~~~gid~-~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~ 153 (351)
|.+|.++|.-| ..|..+.+.|.++.... ...........+..+.+ .| .+ +..+.++...++
T Consensus 1 ~~~VaIvGatG--~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~---~~-----------~~--~~~~~~~~~~~~ 62 (344)
T 3tz6_A 1 GLSIGIVGATG--QVGQVMRTLLDERDFPASAVRFFASARSQGRKLAF---RG-----------QE--IEVEDAETADPS 62 (344)
T ss_dssp CEEEEEETTTS--HHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEE---TT-----------EE--EEEEETTTSCCT
T ss_pred CCEEEEECCCC--hHHHHHHHHHHhCCCCceEEEEEECcccCCCceee---cC-----------Cc--eEEEeCCHHHhc
Confidence 45667777666 58999999999874321 11112222233322221 11 11 111222223456
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCC
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNL 194 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~ 194 (351)
++|++.++. +.....+....+.+.|++ ++|.+.
T Consensus 63 ~~Dvvf~a~-------~~~~s~~~a~~~~~~G~~-vID~Sa 95 (344)
T 3tz6_A 63 GLDIALFSA-------GSAMSKVQAPRFAAAGVT-VIDNSS 95 (344)
T ss_dssp TCSEEEECS-------CHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred cCCEEEECC-------ChHHHHHHHHHHHhCCCE-EEECCC
Confidence 889886643 234555666667777874 666654
No 91
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=24.10 E-value=1.3e+02 Score=25.00 Aligned_cols=24 Identities=21% Similarity=0.338 Sum_probs=20.7
Q ss_pred CCChHHHHHHHHHHcCCCeEEEee
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
.||-|..++..|++.|.+|.+++.
T Consensus 30 s~gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 30 SRGLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 578899999999999999888764
No 92
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=24.10 E-value=35 Score=24.73 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=31.8
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
.+|.+...+..|+..|.++.+++.+|.. ..+.|++.||+.
T Consensus 52 ~~g~g~~~~~~l~~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 91 (120)
T 2wfb_A 52 SHGAGINAAQVLAKSGAGVLLTGYVGPK-----AFQALQAAGIKV 91 (120)
T ss_dssp SSCHHHHHHHHHHHHTEEEEECSCCCHH-----HHHHHHHTTCEE
T ss_pred CCCchHHHHHHHHHCCCCEEEECCCCHh-----HHHHHHHCCCEE
Confidence 4677778888898899999999988754 346788889863
No 93
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=23.44 E-value=63 Score=27.00 Aligned_cols=43 Identities=21% Similarity=0.188 Sum_probs=30.9
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
.||-|..+|..|++.|.+|.+++.-.. ...+.+.+.+++.+.+
T Consensus 38 s~gIG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~ 80 (271)
T 4iin_A 38 SKGIGAEIAKTLASMGLKVWINYRSNA-EVADALKNELEEKGYK 80 (271)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHHHhcCCc
Confidence 467789999999999999888775332 3455666677765543
No 94
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=23.28 E-value=2.5e+02 Score=21.42 Aligned_cols=72 Identities=6% Similarity=0.061 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeC-----HHHHhhhcCCCCCChhHHHHHHHh
Q 018696 172 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVS-----DDEITFLTGGDDHNDDNVVLEKLF 246 (351)
Q Consensus 172 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N-----~~E~~~l~~~~~~~~~~~~~~~l~ 246 (351)
+.+.++++.+++.|..+.+.-+... .. +.+..+++..|.+.++ .+....+.+.. .+.....++.+.
T Consensus 19 ~~~~~l~~~~~~~g~~~~l~TNG~l----~~----~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~-~~~i~~~i~~l~ 89 (182)
T 3can_A 19 EFLIDILKRCGQQGIHRAVDTTLLA----RK----ETVDEVMRNCELLLIDLKSMDSTVHQTFCDVP-NELILKNIRRVA 89 (182)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTCC----CH----HHHHHHHHTCSEEEEECCCSCHHHHHHHHSSC-SHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEECCCCC----CH----HHHHHHHhhCCEEEEECCCCCHHHHHHHhCCC-HHHHHHHHHHHH
Confidence 4446888889998988888866432 12 3344555667876653 44445566643 344444566676
Q ss_pred cCCCeE
Q 018696 247 HPNLKL 252 (351)
Q Consensus 247 ~~g~~~ 252 (351)
+.|.+.
T Consensus 90 ~~g~~v 95 (182)
T 3can_A 90 EADFPY 95 (182)
T ss_dssp HTTCCE
T ss_pred hCCCeE
Confidence 666543
No 95
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=22.76 E-value=68 Score=26.31 Aligned_cols=43 Identities=19% Similarity=0.152 Sum_probs=30.3
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
.||-|..+|..|++.|.+|.++..-.. ...+.+.+.++..|.+
T Consensus 13 s~gIG~~ia~~l~~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~ 55 (246)
T 3osu_A 13 SRGIGRSIALQLAEEGYNVAVNYAGSK-EKAEAVVEEIKAKGVD 55 (246)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHTTSC
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHHHhcCCc
Confidence 577899999999999999987654322 3455566666665543
No 96
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=22.41 E-value=68 Score=28.14 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=20.3
Q ss_pred CCChHHHHHHHHHHcCCCeEEEee
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
.|-.|..+|..|++.|.+|.++-.
T Consensus 25 gG~~Gl~~A~~La~~G~~V~llE~ 48 (382)
T 1ryi_A 25 GGIIGSAIAYYLAKENKNTALFES 48 (382)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCHHHHHHHHHHHhCCCcEEEEeC
Confidence 355688999999999999999964
No 97
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=22.11 E-value=55 Score=25.61 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=0.0
Q ss_pred CCeEEEeecCC-------------ChHHHHHHHHHHHCCCCCCCeeecCC
Q 018696 76 GSSAFVGKLGD-------------DEFGYMLANILKENNVDTSGVRYDST 112 (351)
Q Consensus 76 ~~v~~v~~vG~-------------D~~g~~i~~~l~~~gid~~~v~~~~~ 112 (351)
.++.+++ +|+ |.+|.+|.+.|++.|+++....+.++
T Consensus 16 ~~v~iit-vsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~D 64 (178)
T 3iwt_A 16 LNFYVIT-ISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPD 64 (178)
T ss_dssp CEEEEEE-ECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECS
T ss_pred CEEEEEE-EcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCC
No 98
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.95 E-value=1.4e+02 Score=23.13 Aligned_cols=35 Identities=6% Similarity=0.059 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHH
Q 018696 63 APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (351)
Q Consensus 63 ~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~ 99 (351)
++...+..|.++|.++...+.+++|. +.|.+.+++
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~--~~i~~~l~~ 63 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENR--YAIRAQVSA 63 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHHH
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCH--HHHHHHHHH
Confidence 45678888999999999999999983 334444443
No 99
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=21.70 E-value=90 Score=25.44 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=29.8
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
.||-|..+|..|++.|.+|.+++. +....+.+.+.+++.+.+
T Consensus 14 s~gIG~~~a~~l~~~G~~v~~~~r--~~~~~~~~~~~~~~~~~~ 55 (247)
T 3lyl_A 14 SRGIGFEVAHALASKGATVVGTAT--SQASAEKFENSMKEKGFK 55 (247)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHHHHHTTCC
T ss_pred CChHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHHHhcCCc
Confidence 477899999999999999887765 223345566666665543
No 100
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.67 E-value=1.2e+02 Score=21.98 Aligned_cols=45 Identities=13% Similarity=0.045 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 58 KAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 58 ~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
...||....+...+.+-...+.+|+.+.-+..-+.|++.++..|.
T Consensus 5 ~~~~g~~~~~~~~~~~~~~~~v~V~nLp~~~te~dl~~~F~~~g~ 49 (123)
T 2dha_A 5 SSGGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCP 49 (123)
T ss_dssp SSSCCCCHHHHHHHHCCSCCEEEECSCCTTCCHHHHHHHHHTTSC
T ss_pred CCCCCCchhHHhhccCCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 356777666667777666778999999988888999999999874
No 101
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.61 E-value=1.1e+02 Score=25.26 Aligned_cols=41 Identities=10% Similarity=0.007 Sum_probs=29.2
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
.||-|..+|..|++.|.+|.+++. +....+.+.+.+++.|.
T Consensus 20 s~gIG~aia~~l~~~G~~V~~~~r--~~~~~~~~~~~~~~~~~ 60 (264)
T 3ucx_A 20 GPALGTTLARRCAEQGADLVLAAR--TVERLEDVAKQVTDTGR 60 (264)
T ss_dssp CTTHHHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHCcCEEEEEeC--CHHHHHHHHHHHHhcCC
Confidence 578899999999999999888764 22234455566665543
No 102
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=21.57 E-value=83 Score=26.54 Aligned_cols=24 Identities=21% Similarity=0.160 Sum_probs=20.5
Q ss_pred CCChHHHHHHHHHHcCCCeEEEee
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
.|-.|..+|..|++.|.+|.++-.
T Consensus 23 ~G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 23 LGPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccHHHHHHHHHHHHCCCcEEEEec
Confidence 355688999999999999999975
No 103
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=21.51 E-value=85 Score=22.46 Aligned_cols=32 Identities=25% Similarity=0.150 Sum_probs=26.6
Q ss_pred cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHH
Q 018696 280 AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLF 317 (351)
Q Consensus 280 ~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~ 317 (351)
-.|..|-||..-|-++++|++|.- +.++|+..
T Consensus 63 R~DKh~kGd~aEA~iAyAWleG~i------s~eEavei 94 (133)
T 1ztd_A 63 RVDKHAKGDYAEALIAKAWLMGLI------SEREAVEI 94 (133)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTTSS------CHHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHhccc------cHHHHHHH
Confidence 356788999999999999999985 37888774
No 104
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=21.48 E-value=1.2e+02 Score=24.52 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=28.6
Q ss_pred CCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCC
Q 018696 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENN 101 (351)
Q Consensus 60 ~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~g 101 (351)
.||-|..++..|++.|.+|.+++.-..+ ..+.+.+.++..+
T Consensus 14 sggiG~~~a~~l~~~G~~V~~~~~r~~~-~~~~~~~~~~~~~ 54 (247)
T 2hq1_A 14 SRGLGKAIAWKLGNMGANIVLNGSPAST-SLDATAEEFKAAG 54 (247)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECTTCS-HHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHCCCEEEEEcCcCHH-HHHHHHHHHHhcC
Confidence 5788999999999999998887544333 3444555565544
No 105
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=20.72 E-value=31 Score=24.88 Aligned_cols=39 Identities=18% Similarity=0.253 Sum_probs=30.8
Q ss_pred CChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 61 GGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 61 GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
+|.+...+..|+..|.++.+++.+|... .+.|++.||..
T Consensus 48 ~g~g~~~~~~l~~~gv~~vi~~~iG~~a-----~~~L~~~GI~v 86 (116)
T 1rdu_A 48 HGTGPKVVQSLVSKGVEYLIASNVGRNA-----FETLKAAGVKV 86 (116)
T ss_dssp CCSSCSHHHHHHTTTCCEEECSSCCSSC-----HHHHHTTTCEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhH-----HHHHHHCCCEE
Confidence 4555578888889999999999999864 45778888863
No 106
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=20.50 E-value=79 Score=26.90 Aligned_cols=23 Identities=39% Similarity=0.326 Sum_probs=18.7
Q ss_pred CChHHHHHHHHHHcCCCeEEEee
Q 018696 61 GGAPANVAVGISRLGGSSAFVGK 83 (351)
Q Consensus 61 GG~~~n~a~~l~~lG~~v~~v~~ 83 (351)
|-.|..+|..|++.|.+|.++-.
T Consensus 25 G~aGl~aA~~l~~~g~~v~lie~ 47 (319)
T 3cty_A 25 GAAGFSAAVYAARSGFSVAILDK 47 (319)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CHHHHHHHHHHHhCCCcEEEEeC
Confidence 45678889999999999998853
No 107
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=20.38 E-value=2.6e+02 Score=24.83 Aligned_cols=93 Identities=19% Similarity=0.255 Sum_probs=48.2
Q ss_pred CCeEEEeecCCChHHHHHHHHHHHCCCCCCCee-ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcC
Q 018696 76 GSSAFVGKLGDDEFGYMLANILKENNVDTSGVR-YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQ 154 (351)
Q Consensus 76 ~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~-~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~ 154 (351)
.+|.++|.-| ..|..+.+.|.+.+....-+. ....+..+..+. + .+.+ +..+.++...+++
T Consensus 3 ~kVaIvGATG--~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-----------~---~~~~--~~~~~~~~~~~~~ 64 (366)
T 3pwk_A 3 YTVAVVGATG--AVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-----------F---KDQD--ITIEETTETAFEG 64 (366)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-----------E---TTEE--EEEEECCTTTTTT
T ss_pred cEEEEECCCC--hHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-----------e---cCCC--ceEeeCCHHHhcC
Confidence 4566677666 589999999998653211111 112222222211 1 1111 1222222334678
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCC
Q 018696 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNL 194 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~ 194 (351)
+|++.++. +.....+....+.+.|++ ++|.+.
T Consensus 65 ~Dvvf~a~-------~~~~s~~~a~~~~~~G~~-vIDlSa 96 (366)
T 3pwk_A 65 VDIALFSA-------GSSTSAKYAPYAVKAGVV-VVDNTS 96 (366)
T ss_dssp CSEEEECS-------CHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred CCEEEECC-------ChHhHHHHHHHHHHCCCE-EEEcCC
Confidence 89886653 234555666667777875 566654
No 108
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=20.21 E-value=1.4e+02 Score=25.50 Aligned_cols=75 Identities=20% Similarity=0.112 Sum_probs=43.9
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCCh---HHHHHHHHHHcCCCeEEEeecCCChH-----------HHH
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGA---PANVAVGISRLGGSSAFVGKLGDDEF-----------GYM 92 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~---~~n~a~~l~~lG~~v~~v~~vG~D~~-----------g~~ 92 (351)
++|+|+.+.....|.... +-.|. .....||. ..+.+..|++.|.+|.+++.-..... ...
T Consensus 2 ~~mkIl~v~~~~~~~~~~-~~~p~-----~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~ 75 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSD-AWISV-----PPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPGLTVVPAGEPEE 75 (342)
T ss_dssp -CCEEEEECCCCBCTTSS-SBCCS-----SCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCSTTEEECSCCSHHH
T ss_pred CccEEEEEeccccccCcc-ccccc-----CcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCcceeccCCcHHH
Confidence 357899888765442111 00000 00235775 45678888899999999986543211 125
Q ss_pred HHHHHHHCCCCCCCe
Q 018696 93 LANILKENNVDTSGV 107 (351)
Q Consensus 93 i~~~l~~~gid~~~v 107 (351)
+.+.+++...|+-++
T Consensus 76 l~~~l~~~~~Dvi~~ 90 (342)
T 2iuy_A 76 IERWLRTADVDVVHD 90 (342)
T ss_dssp HHHHHHHCCCSEEEE
T ss_pred HHHHHHhcCCCEEEE
Confidence 677888877765433
No 109
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=20.05 E-value=1.1e+02 Score=28.60 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=0.0
Q ss_pred CCCCccccccccccCCCCCCCCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEE
Q 018696 7 PTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFV 81 (351)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v 81 (351)
||+ |..+...+.+.+.+|+||| .|-.|+.+|..|+++|.+|.++
T Consensus 18 ~~~-------m~~~~~~~~~~~~DVvVIG------------------------gGpaGl~aA~~la~~G~~V~li 61 (519)
T 3qfa_A 18 GSH-------MNGPEDLPKSYDYDLIIIG------------------------GGSGGLAAAKEAAQYGKKVMVL 61 (519)
T ss_dssp ---------------CCCSSCSEEEEEEC------------------------CSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCC-------CCcccccCcCCCCCEEEEC------------------------CCHHHHHHHHHHHhCCCeEEEE
Done!