Your job contains 1 sequence.
>018697
MQGGSSGIGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEG
LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV
GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD
VNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRM
LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN
QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018697
(351 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030387 - symbol:AT1G20540 "AT1G20540" species... 1607 3.8e-165 1
TAIR|locus:2014629 - symbol:DWA2 "AT1G76260" species:3702... 1480 1.1e-151 1
ZFIN|ZDB-GENE-041010-167 - symbol:tssc1 "tumor suppressin... 427 4.2e-40 1
MGI|MGI:1289332 - symbol:Tssc1 "tumor suppressing subtran... 392 2.1e-36 1
DICTYBASE|DDB_G0274279 - symbol:tssc1 "WD40 repeat-contai... 296 2.2e-32 2
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 206 5.6e-13 2
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 194 8.2e-13 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 194 8.2e-13 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 190 2.5e-12 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 190 2.5e-12 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 190 2.5e-12 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 190 2.5e-12 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 190 2.5e-12 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 190 2.5e-12 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 190 2.5e-12 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 190 3.2e-12 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 190 3.2e-12 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 189 3.3e-12 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 188 4.3e-12 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 188 4.3e-12 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 187 5.6e-12 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 186 7.3e-12 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 186 7.3e-12 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 186 7.3e-12 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 186 7.3e-12 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 185 7.7e-12 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 185 9.0e-12 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 185 9.6e-12 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 185 9.6e-12 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 185 9.6e-12 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 185 9.6e-12 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 185 9.6e-12 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 185 9.6e-12 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 185 9.6e-12 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 185 9.6e-12 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 163 1.5e-11 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 181 2.8e-11 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 181 3.0e-11 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 160 3.3e-11 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 179 4.8e-11 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 178 5.8e-11 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 178 5.8e-11 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 178 6.0e-11 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 177 8.0e-11 1
ASPGD|ASPL0000006005 - symbol:AN5972 species:162425 "Emer... 181 9.3e-11 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 176 9.8e-11 1
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 174 8.3e-10 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 142 3.2e-09 2
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 162 3.8e-09 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 141 4.2e-09 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 141 4.2e-09 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 141 4.2e-09 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 142 5.5e-09 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 140 5.6e-09 2
WB|WBGene00009542 - symbol:F38E11.5 species:6239 "Caenorh... 165 7.1e-09 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 140 9.4e-09 2
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 159 1.1e-08 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 155 1.2e-08 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 156 2.1e-08 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 154 3.6e-08 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 154 3.6e-08 1
UNIPROTKB|A8QB65 - symbol:Bm1_47965 "Ribosome biogenesis ... 153 4.4e-08 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 153 4.5e-08 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 153 4.6e-08 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 153 4.6e-08 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 147 4.6e-08 2
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 150 4.7e-08 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 150 4.7e-08 1
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 157 4.9e-08 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 148 8.4e-08 1
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 151 1.6e-07 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 146 1.8e-07 1
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 151 2.2e-07 1
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 151 2.3e-07 1
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 151 2.3e-07 1
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 151 2.3e-07 1
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 151 2.3e-07 1
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 151 2.3e-07 1
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 151 2.4e-07 1
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 155 2.8e-07 2
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 143 3.0e-07 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 143 3.0e-07 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 144 3.1e-07 1
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 149 3.9e-07 1
UNIPROTKB|Q9UNX4 - symbol:WDR3 "WD repeat-containing prot... 149 4.0e-07 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 144 4.3e-07 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 119 6.5e-07 2
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 140 6.8e-07 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 140 6.9e-07 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 140 7.8e-07 1
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 145 1.1e-06 1
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 150 1.1e-06 2
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 141 1.2e-06 1
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 144 1.3e-06 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 140 1.4e-06 1
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 144 1.4e-06 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 140 1.6e-06 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 139 1.6e-06 1
DICTYBASE|DDB_G0270992 - symbol:sec31 "putative transport... 145 1.7e-06 1
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 143 1.8e-06 1
WARNING: Descriptions of 170 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2030387 [details] [associations]
symbol:AT1G20540 "AT1G20540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0080008 eggNOG:NOG314403 ProtClustDB:CLSN2682746
EMBL:AY093157 EMBL:BT000290 IPI:IPI00532337 RefSeq:NP_173478.2
UniGene:At.25733 UniGene:At.70424 ProteinModelPortal:Q8RWD8
SMR:Q8RWD8 STRING:Q8RWD8 PaxDb:Q8RWD8 PRIDE:Q8RWD8
EnsemblPlants:AT1G20540.1 GeneID:838642 KEGG:ath:AT1G20540
TAIR:At1g20540 InParanoid:Q8RWD8 OMA:GMDCEAR PhylomeDB:Q8RWD8
ArrayExpress:Q8RWD8 Genevestigator:Q8RWD8 Uniprot:Q8RWD8
Length = 351
Score = 1607 (570.8 bits), Expect = 3.8e-165, P = 3.8e-165
Identities = 294/350 (84%), Positives = 320/350 (91%)
Query: 1 MQGGSSGIGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEG 60
MQGGSSGIGYGLKYQ+RCISDVKADTD+TSFLTGTLSLKEENEVHLLRLSSGG+ELICEG
Sbjct: 1 MQGGSSGIGYGLKYQSRCISDVKADTDYTSFLTGTLSLKEENEVHLLRLSSGGSELICEG 60
Query: 61 LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120
LFSHPNEIWDL+SCPFDQRIFSTVFSTGES+GAAIWQIPELYGQLNSPQLER+A+LDAHV
Sbjct: 61 LFSHPNEIWDLASCPFDQRIFSTVFSTGESFGAAIWQIPELYGQLNSPQLERVASLDAHV 120
Query: 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180
GKINCVLWW SGR DKL+SIDE+NIFLWSLDCS K+A+V SK S+GMLH LSGGAWDPHD
Sbjct: 121 GKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDPHD 180
Query: 181 VNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRM 240
VNAVAAT ESSVQFWDLR+M K NSIEHAHVR VDY+ K++H+LVTA DESGIH+WDLR
Sbjct: 181 VNAVAATGESSVQFWDLRTMKKVNSIEHAHVRGVDYNPKREHILVTAEDESGIHVWDLRK 240
Query: 241 LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN 300
K P+QELPGHTHWTWAV CNPEYDG ILSAGTDS VNLW S ++ D+ SES VES
Sbjct: 241 AKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVESTR 300
Query: 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR 350
QR N LLNSY+DYEDSVYGLAWSSREPW+FASLSYDGRV++ESVKPFL R
Sbjct: 301 QRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYDGRVIIESVKPFLPR 350
>TAIR|locus:2014629 [details] [associations]
symbol:DWA2 "AT1G76260" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009788 "negative regulation of abscisic acid
mediated signaling pathway" evidence=IMP] [GO:0016567 "protein
ubiquitination" evidence=IMP] [GO:0006281 "DNA repair"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA] [GO:0042732 "D-xylose metabolic
process" evidence=RCA] [GO:0048608 "reproductive structure
development" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009738
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567
GO:GO:0009788 EMBL:AC009978 EMBL:AC012394 GO:GO:0080008
EMBL:BT010880 EMBL:AK176410 EMBL:AK175439 EMBL:AK176650
IPI:IPI00524532 RefSeq:NP_177753.1 UniGene:At.24286
UniGene:At.48378 ProteinModelPortal:Q6NPN9 SMR:Q6NPN9 STRING:Q6NPN9
PaxDb:Q6NPN9 PRIDE:Q6NPN9 DNASU:843959 EnsemblPlants:AT1G76260.1
GeneID:843959 KEGG:ath:AT1G76260 GeneFarm:3013 TAIR:At1g76260
eggNOG:NOG314403 HOGENOM:HOG000264967 InParanoid:Q6NPN9 OMA:ACVAWEP
PhylomeDB:Q6NPN9 ProtClustDB:CLSN2682746 Genevestigator:Q6NPN9
Uniprot:Q6NPN9
Length = 350
Score = 1480 (526.0 bits), Expect = 1.1e-151, P = 1.1e-151
Identities = 275/351 (78%), Positives = 306/351 (87%)
Query: 1 MQGGSSGIGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEG 60
MQGGSSGIGYGLKYQARCISDVKAD DHTSFLTGTLSLKEENEVHLLRLSSGG+EL+CEG
Sbjct: 1 MQGGSSGIGYGLKYQARCISDVKADRDHTSFLTGTLSLKEENEVHLLRLSSGGSELLCEG 60
Query: 61 LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120
LFSHPNEIWDL+S PFDQRIFSTVFSTG+SYGAAIWQIPE YGQ NS LE +A+LDAHV
Sbjct: 61 LFSHPNEIWDLASSPFDQRIFSTVFSTGDSYGAAIWQIPEPYGQSNSSTLECVASLDAHV 120
Query: 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180
GKINCVLW SG DKL+S+DE+N+ WSLD S K+A+V SK+S+GM H LSGGAW+PHD
Sbjct: 121 GKINCVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSGGAWNPHD 180
Query: 181 VNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRM 240
VN+VAAT ESS+QFWDLR+M K NSIE AHVRNVDY+ K++H+LV+A DESGIHLWDLR
Sbjct: 181 VNSVAATSESSIQFWDLRTMKKNNSIERAHVRNVDYNLKREHILVSADDESGIHLWDLRK 240
Query: 241 LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN 300
K P+QELPGHTHWTWAV CNPEY+ ILS GTDS VNLW S S+ + SES VE+
Sbjct: 241 TKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFASASSEHKT-SESPVEASR 299
Query: 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
QR N LLNSY+DYEDSVYGLAWSSREPWIFASLSYDGRVV+ESVKPFL R+
Sbjct: 300 QRVNPLLNSYTDYEDSVYGLAWSSREPWIFASLSYDGRVVIESVKPFLPRR 350
>ZFIN|ZDB-GENE-041010-167 [details] [associations]
symbol:tssc1 "tumor suppressing subtransferable
candidate 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-041010-167 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314403
HOGENOM:HOG000264967 EMBL:BC083257 IPI:IPI00507270
RefSeq:NP_001006065.1 UniGene:Dr.108122 ProteinModelPortal:Q5XJP1
PRIDE:Q5XJP1 GeneID:450045 KEGG:dre:450045 CTD:7260
HOVERGEN:HBG052937 InParanoid:Q5XJP1 OrthoDB:EOG4C5CJP
NextBio:20833026 ArrayExpress:Q5XJP1 Uniprot:Q5XJP1
Length = 387
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 95/262 (36%), Positives = 155/262 (59%)
Query: 106 NSPQ-LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK 162
N+PQ LE + LD AH G + CVLW G +++S+ E ++ LW L S+ A + S
Sbjct: 118 NNPQTLELLCHLDNSAH-GSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSS 176
Query: 163 ---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVD 215
+ G L + + G W PH + +A +++++ WDLRSM + IE+AH VR++D
Sbjct: 177 ATLEGKGQLKF-TAGKWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLD 235
Query: 216 YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275
++ K++ L + D+ + WD+R + P++ L H+HW W+V N +D +L+A +DS
Sbjct: 236 FNPNKQYYLASCGDDCKVKFWDVRHISEPVKCLEEHSHWVWSVRYNHSHDQLLLTASSDS 295
Query: 276 TVNLW-LVSTSN----H----DEL--PSESLVESPNQRA--NSLLNSYSDYEDSVYGLAW 322
V L +VS S+ H D+L P E+ E + +S++++Y ++EDSVY + W
Sbjct: 296 RVILSNMVSISSEPFGHLVDDDDLSDPEENQQEDKGKEPLQDSIISTYEEHEDSVYAVEW 355
Query: 323 SSREPWIFASLSYDGRVVVESV 344
S+ +PW+FASLSYDGR+V+ V
Sbjct: 356 SAADPWLFASLSYDGRLVINRV 377
Score = 219 (82.2 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 57/168 (33%), Positives = 89/168 (52%)
Query: 10 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIW 69
YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW
Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLKFDNQIHIIDFDDENNMINKSVLLHDAGEIW 68
Query: 70 DLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY--GQ-------LNSPQ-LERIAA 115
+S P D+ + +T ++ T ES AA+W++P + G N+PQ LE +
Sbjct: 69 HISGSPADKAVLTTCYNKTSESRVLTCAAVWRMPPEWESGNHESPDDSSNNPQTLELLCH 128
Query: 116 LD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS 161
LD AH G + CVLW G +++S+ E ++ LW L S+ A + S
Sbjct: 129 LDNSAH-GSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISS 175
>MGI|MGI:1289332 [details] [associations]
symbol:Tssc1 "tumor suppressing subtransferable candidate 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1289332 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
eggNOG:NOG314403 HOGENOM:HOG000264967 OMA:ACVAWEP EMBL:AC136986
CTD:7260 HOVERGEN:HBG052937 OrthoDB:EOG4C5CJP EMBL:CT010449
EMBL:BC031458 IPI:IPI00321310 RefSeq:NP_958745.2 UniGene:Mm.273724
ProteinModelPortal:Q8K0G5 SMR:Q8K0G5 STRING:Q8K0G5
PhosphoSite:Q8K0G5 PaxDb:Q8K0G5 PRIDE:Q8K0G5
Ensembl:ENSMUST00000035657 GeneID:380752 KEGG:mmu:380752
UCSC:uc007ngb.2 InParanoid:Q8K0G5 NextBio:401194 Bgee:Q8K0G5
CleanEx:MM_TSSC1 Genevestigator:Q8K0G5
GermOnline:ENSMUSG00000036613 Uniprot:Q8K0G5
Length = 386
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 82/255 (32%), Positives = 140/255 (54%)
Query: 110 LERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSS 165
LE + LD G + CV+W G K++S+ + +I LW L S+ A + S +
Sbjct: 123 LELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGR 182
Query: 166 GMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKK 221
G L + + G W PH + VA +++++ WD RSM + IE+AH VR++D++ K+
Sbjct: 183 GQLKF-TAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQ 241
Query: 222 HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV---N 278
+ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V N
Sbjct: 242 YYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSN 301
Query: 279 LWLVSTSNHDELPSESLVESPNQR---------ANSLLNSYSDYEDSVYGLAWSSREPWI 329
+ +S+ L + + P + ++++ +Y ++EDSVY + W+S +PW+
Sbjct: 302 MVSISSEPFGHLVDDGDISDPEEHHAEKSKEPLQDNVIATYEEHEDSVYAVDWASADPWL 361
Query: 330 FASLSYDGRVVVESV 344
FASLSYDGR+V+ V
Sbjct: 362 FASLSYDGRLVINRV 376
Score = 210 (79.0 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 55/167 (32%), Positives = 87/167 (52%)
Query: 10 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIW 69
YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW
Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIW 68
Query: 70 DLSSCPFDQRIFSTVFS-TGESYG---AAIWQIP-ELY-GQLNSPQ--------LERIAA 115
+S+ P D+ + +T ++ T +S AA+W++P EL G SP LE +
Sbjct: 69 HISASPADKGVLATCYNKTTDSRVQACAAVWRMPKELESGSHESPDDPASTAQTLELLCH 128
Query: 116 LDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS 161
LD G + CV+W G K++S+ + +I LW L S+ A + S
Sbjct: 129 LDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLAS 175
>DICTYBASE|DDB_G0274279 [details] [associations]
symbol:tssc1 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0274279 GO:GO:0045335 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000151_GR EMBL:AAFI02000012 eggNOG:NOG314403
RefSeq:XP_643981.1 ProteinModelPortal:Q86A97 STRING:Q86A97
PRIDE:Q86A97 EnsemblProtists:DDB0234267 GeneID:8619407
KEGG:ddi:DDB_G0274279 OMA:RINESMD ProtClustDB:CLSZ2729203
Uniprot:Q86A97
Length = 400
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 67/224 (29%), Positives = 126/224 (56%)
Query: 86 STGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145
+ + +++W+I E ++S +E + L H G I +L SG ++ ++S+D+ NI
Sbjct: 111 TNNNDFKSSLWRINE---SMDS--IEELFELKGHTGIIKPILCDPSGSNNFIISLDDSNI 165
Query: 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS 205
LWS ++N KQ G L LS G+ +P+ N +A + +++ WD R+ +T S
Sbjct: 166 RLWS-KIDDQNEPTVIKQF-GNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKETFS 223
Query: 206 IEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNP 262
++ AH +R++D++ K + L++A D+ + +WD R + P++ GH HW W+ N
Sbjct: 224 MDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDPVKIFSGHNHWIWSAKFNR 283
Query: 263 EYDGFILSAGTDSTVNLW-LVSTSNHDELPSESLVESPNQRANS 305
+D I+++ +D+TV LW L S S+ SE+ + + N++ +S
Sbjct: 284 YHDQLIITSSSDNTVKLWNLYSLSS--AFNSENNISNSNEQQHS 325
Score = 255 (94.8 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 70/226 (30%), Positives = 111/226 (49%)
Query: 10 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIW 69
YGL + R +S + A+ D FL GT +L+EENE+ LL G + C +F HP EI
Sbjct: 14 YGLSQKTRALSHITAEADVNRFLVGTTALREENEIALLEAKEG-EGVRCLSIFPHPKEIH 72
Query: 70 DLSSCPFDQRIFSTVFST---GESYGAAIWQIPELYGQLNS--------------PQLER 112
++SCPFD +F +V++T G + N+ +E
Sbjct: 73 SITSCPFDSSLFFSVYNTSGGGNNNSNNTNNNDNTNNNTNNNDFKSSLWRINESMDSIEE 132
Query: 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172
+ L H G I +L SG ++ ++S+D+ NI LWS ++N KQ G L LS
Sbjct: 133 LFELKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWS-KIDDQNEPTVIKQF-GNLSKLS 190
Query: 173 GGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNV-DYD 217
G+ +P+ N +A + +++ WD R+ +T S++ AH + D D
Sbjct: 191 VGSINPNISNQLATANDVNIKGWDFRNAKETFSMDKAHSEQIRDID 236
Score = 132 (51.5 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 32/87 (36%), Positives = 50/87 (57%)
Query: 267 FILSAGTDSTVNLWLVSTSNHDELPSESLVESP----NQRANS-----LLNSYSDYEDSV 317
+ LS+ +S N+ + H + P+E + P Q+ N L+ +Y ++EDSV
Sbjct: 304 YSLSSAFNSENNISNSNEQQHSQQPNEQQPQQPPQPVKQKKNKRNEDQLIKTYEEHEDSV 363
Query: 318 YGLAWSSREPWIFASLSYDGRVVVESV 344
Y ++WSS ++FASLSYDGR VV +V
Sbjct: 364 YNISWSSSN-FLFASLSYDGRFVVNNV 389
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 206 (77.6 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 69/242 (28%), Positives = 115/242 (47%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N +E+I + +AH I C++ + + L S D+ I LW + N QV
Sbjct: 86 NYNTMEKIKSFEAHADYIRCIIVHPTLPYI-LSSSDDMFIKLWDYEKGWSNTQV----FE 140
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIE-HAH-VRNVDYDTK-KK 221
G HY+ AW+P D N A A+ + +V+ W + S ++E H + +V+Y + +K
Sbjct: 141 GHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEK 200
Query: 222 HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWL 281
L++ AD+ + +WD + K +Q L GH++ VC +PE ILS D TV LW
Sbjct: 201 PYLISGADDKLVKIWDYQS-KTCVQTLEGHSNNVSVVCYHPELP-LILSGSEDGTVKLWH 258
Query: 282 VSTSNHDELPSESL--VESPN-QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGR 338
ST + + + V S N R ++ + Y+D L +P + S+ G+
Sbjct: 259 SSTYRLERTLNYGMGFVWSMNFLRGSNFIGL--GYDDGTVVLKIGKNKPPV--SMDQGGK 314
Query: 339 VV 340
V+
Sbjct: 315 VI 316
Score = 129 (50.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 36/161 (22%), Positives = 75/161 (46%)
Query: 137 LVSIDEENIFLWSLDCSN--KNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQF 194
L S+ + N+++W+ + N K+ +V +++ W V + ++ ++
Sbjct: 31 LASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQW------IVTGSDDTYIRV 84
Query: 195 WDLRSMGKTNSIE-HA-HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT 252
++ +M K S E HA ++R + ++L +++D+ I LWD + Q GH+
Sbjct: 85 YNYNTMEKIKSFEAHADYIRCIIVHPTLPYIL-SSSDDMFIKLWDYEKGWSNTQVFEGHS 143
Query: 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE 293
H+ ++ NP+ +A D TV +W ++ S H E
Sbjct: 144 HYVMSIAWNPKDTNQFATASLDKTVKVWSIN-SPHPHFTLE 183
Score = 38 (18.4 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFST 87
HP E W L+S +D ++ + T
Sbjct: 24 HPTEPWILASL-YDGNVYIWNYET 46
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 194 (73.4 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 70/300 (23%), Positives = 127/300 (42%)
Query: 50 SSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE----SYGAAIWQIPELYGQL 105
S G ++ CE +H E+ P + I +T + + Y + P+ G+
Sbjct: 99 SDKGGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAK-PDPSGEC 157
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS 164
N P L L H K L W+S L+S D+ + LW ++ K ++ ++
Sbjct: 158 N-PDLR----LRGHQ-KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 211
Query: 165 --SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---Y 216
+G + AW H+ + + + WD RS K + + AH V+ +
Sbjct: 212 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 271
Query: 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276
+ + +L T + + + LWDLR LK + H + V +P + + S+GTD
Sbjct: 272 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 331
Query: 277 VNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+N+W +S +E +E + P + LL + + + +W+ EPW+ S+S D
Sbjct: 332 LNVWDLSKIG-EEQSAEDAEDGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 386
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 194 (73.4 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 70/300 (23%), Positives = 127/300 (42%)
Query: 50 SSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE----SYGAAIWQIPELYGQL 105
S G ++ CE +H E+ P + I +T + + Y + P+ G+
Sbjct: 99 SEKGGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAK-PDPSGEC 157
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS 164
N P L L H K L W+S L+S D+ + LW ++ K ++ ++
Sbjct: 158 N-PDLR----LRGHQ-KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 211
Query: 165 --SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---Y 216
+G + AW H+ + + + WD RS K + + AH V+ +
Sbjct: 212 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 271
Query: 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276
+ + +L T + + + LWDLR LK + H + V +P + + S+GTD
Sbjct: 272 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 331
Query: 277 VNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+N+W +S +E +E + P + LL + + + +W+ EPW+ S+S D
Sbjct: 332 LNVWDLSKIG-EEQSAEDAEDGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 386
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 360
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 360
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 360
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 360
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 360
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 360
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 360
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 190 (71.9 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 285
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 286 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 345
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 346 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 404
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 405 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 439
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 190 (71.9 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW ++ K ++ ++ +G + AW H+
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 285
Query: 183 AVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WD RS K + + AH V+ ++ + +L T + + + LWD
Sbjct: 286 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 345
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR LK + H + V +P + + S+GTD +N+W +S +E +E +
Sbjct: 346 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAED 404
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P + LL + + + +W+ EPW+ S+S D
Sbjct: 405 GPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 439
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 189 (71.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 58/225 (25%), Positives = 106/225 (47%)
Query: 127 LWWSSGRHDKLVS-IDEENIFLWSLDCSNKNAQVQSKQS-SGMLHYLSGGAWDPHDVNAV 184
L WSS + L+S ++ I LW + + + + G + AW + N
Sbjct: 175 LAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIF 234
Query: 185 -AATCESSVQFWDLRSMGKTNSIEH---AHVRNVDY---DTKKKHLLVTAADESGIHLWD 237
+A + + WDLR TN ++H H R ++Y + + +L TA+ +S + L+D
Sbjct: 235 GSAGDDCQLVIWDLR----TNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFD 290
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR L AP+ L H + V +P ++ + S+G D + +W ++ ++L E E
Sbjct: 291 LRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAE 350
Query: 298 S-PNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVV 341
P + LL S+ ++ + AW+ EPW+ +S++ D + V
Sbjct: 351 DGPPE----LLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQV 391
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 188 (71.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW + K +V ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S +E +E
Sbjct: 301 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAE 359
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 360 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 188 (71.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW + K +V ++ +G + AW H+
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESL 241
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S +E +E
Sbjct: 301 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAE 359
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 360 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 187 (70.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 53/220 (24%), Positives = 97/220 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+S L+S D+ + LW + K ++ ++ +G + AW H+
Sbjct: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 241 FGSVADDQKLMIWDTRS-NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S +E +E
Sbjct: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAE 358
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 359 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 394
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 186 (70.5 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 186 (70.5 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 186 (70.5 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 186 (70.5 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 70/295 (23%), Positives = 124/295 (42%)
Query: 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI------PELYGQLNSPQLE 111
CE +H E+ P + I +T T S G ++ P+ G+ N P L
Sbjct: 116 CEIKINHEGEVNRARYMPQNPHIIAT--KTPSS-GVLVFDYTKHPAKPDPSGECN-PDLR 171
Query: 112 RIAALDAHVGKINCVLWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGML 168
L H K L W+S L+S D+ + LW ++ K ++ ++ +G
Sbjct: 172 ----LRGHQ-KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHS 226
Query: 169 HYLSGGAWDP-HDVNAVAATCESSVQFWDLRS--MGKTNSIEHAHVRNVD---YDTKKKH 222
+ AW H+ + + + WD RS K + + AH V+ ++ +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 223 LLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVC-CNPEYDGFILSAGTDSTVNLWL 281
+L T + + + LWDLR LK + H + V +P + + S+GTD +N+W
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWD 346
Query: 282 VSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+S +E +E + P + LL + + + +W+ EPW+ S+S D
Sbjct: 347 LSKIG-EEQSAEDAEDGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 185 (70.2 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 148 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 207
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 208 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 266
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 267 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 325
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 326 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 361
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 185 (70.2 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 56/225 (24%), Positives = 106/225 (47%)
Query: 127 LWWSSGRHDKLVS-IDEENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGGAWDPHDVNAV 184
L WS + L+S ++ I LW + + ++ + + G ++ +W + N
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLF 233
Query: 185 AATCESS-VQFWDLRSMGKTNSIEH---AHVRNVDY---DTKKKHLLVTAADESGIHLWD 237
+ E + WD R TN ++H H R V+Y + + +L TA+ +S + L+D
Sbjct: 234 GSAGEDGRLVIWDTR----TNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFD 289
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR L AP+ + H + V +P ++ + S+G D + +W ++ ++L E E
Sbjct: 290 LRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAE 349
Query: 298 S-PNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVV 341
P + LL S+ ++ + AW+ EPW+ AS++ D + V
Sbjct: 350 DGPPE----LLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQV 390
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 185 (70.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 163 (62.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 40/154 (25%), Positives = 71/154 (46%)
Query: 189 ESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLWDLRMLK 242
+ + WD RS T+ H AH V+ ++ + +L T + + + LWDLR LK
Sbjct: 4 DQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 62
Query: 243 APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQR 302
+ H + V +P + + S+GTD +N+W +S ++ P E + P +
Sbjct: 63 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAEDGPPE- 120
Query: 303 ANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
LL + + + +W+ EPW+ S+S D
Sbjct: 121 ---LLFIHGGHTAKISDFSWNPNEPWVICSVSED 151
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 181 (68.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 52/220 (23%), Positives = 97/220 (44%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + + K ++ ++ +G + +W H+
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H AH V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S +E +E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG-EEQSAEDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 181 (68.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 52/220 (23%), Positives = 96/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K ++ ++ +G + +W H+
Sbjct: 183 LSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEHA---HVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ HA H V+ ++ + +L T + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 160 (61.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 195 WDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL 248
WD RS T+ H AH V+ ++ + +L T + + + LWDLR LK +
Sbjct: 3 WDTRS-NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 61
Query: 249 PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLN 308
H + V +P + + S+GTD +N+W +S ++ P E + P + LL
Sbjct: 62 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAEDGPPE----LLF 116
Query: 309 SYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ + + +W+ EPW+ S+S D
Sbjct: 117 IHGGHTAKISDFSWNPNEPWVICSVSED 144
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 179 (68.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 53/220 (24%), Positives = 99/220 (45%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ + L+S D+ I LW ++ + K +V ++ +G + AW H+
Sbjct: 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESL 246
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH---AHVRNVD---YDTKKKHLLVTAADESGIHLW 236
+ + + WD R+ T+ H AH V+ ++ + +L T + + + LW
Sbjct: 247 FGSVADDQKLMIWDTRN-NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +++W +S +E +E
Sbjct: 306 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG-EEQSTEDAE 364
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPWI S+S D
Sbjct: 365 DGPPE----LLFIHGGHTAKISDFSWNPNEPWIICSVSED 400
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 178 (67.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 49/216 (22%), Positives = 100/216 (46%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCS-NKNAQVQSKQS-SGMLHYLSGGAWDP-HDVN 182
L W+ + ++S D++ + W ++ + N ++Q+K G + AW HD
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGV 237
Query: 183 AVAATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRM 240
+ + + WD+R+ + I+ H A V + ++ + +L T + + + LWDLR
Sbjct: 238 FGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 241 LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN 300
L+ + H + V +P + + S+GTD +++W +S D+ +E + P
Sbjct: 298 LRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQ-SAEDAEDGPP 356
Query: 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ LL + + + +W+ EPW+ S+S D
Sbjct: 357 E----LLFIHGGHTAKISDFSWNPNEPWVVCSVSED 388
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 178 (67.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 49/216 (22%), Positives = 100/216 (46%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCS-NKNAQVQSKQS-SGMLHYLSGGAWDP-HDVN 182
L W+ + ++S D++ + W ++ + N ++Q+K G + AW HD
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGV 237
Query: 183 AVAATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRM 240
+ + + WD+R+ + I+ H A V + ++ + +L T + + + LWDLR
Sbjct: 238 FGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 241 LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN 300
L+ + H + V +P + + S+GTD +++W +S D+ +E + P
Sbjct: 298 LRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQ-SAEDAEDGPP 356
Query: 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ LL + + + +W+ EPW+ S+S D
Sbjct: 357 E----LLFIHGGHTAKISDFSWNPNEPWVVCSVSED 388
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 178 (67.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 49/215 (22%), Positives = 97/215 (45%)
Query: 129 WSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVNAV 184
W+ + L+S D+++I +W + ++K+ + +G + AW HD
Sbjct: 182 WNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFG 241
Query: 185 AATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241
+ + + WD R+ K + AH V + ++ + L+ T + + + LWD+R L
Sbjct: 242 SVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNL 301
Query: 242 KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQ 301
+ L HT + V +P + + S G+D VN+W +S +E +E + P +
Sbjct: 302 GNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIG-EEQNNEDAADGPPE 360
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
LL + + + +W+ +PW AS++ D
Sbjct: 361 ----LLFIHGGHTSKISDFSWNPNDPWSIASVAED 391
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 177 (67.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 51/220 (23%), Positives = 95/220 (43%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAWDP-HDVN 182
L W+ L+S D+ I LW + K +V ++ +G + +W H+
Sbjct: 183 LSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH------AHVRNVDYDTKKKHLLVTAADESGIHLW 236
+ + + WD RS T+ H A V + ++ + +L + + + + LW
Sbjct: 243 FGSVADDQKLMIWDTRS-NNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALW 301
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
DLR LK + H + V +P + + S+GTD +N+W +S ++ P E
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP-EDAE 360
Query: 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ P + LL + + + +W+ EPW+ S+S D
Sbjct: 361 DGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 181 (68.8 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 57/180 (31%), Positives = 86/180 (47%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E+IA+ +AH I + + + L + D+ I LW + K QV S HY
Sbjct: 88 EKIASFEAHPDYIRSIAVHPT-QPFVLTASDDMTIKLWDWEKGWKCVQVYEGHS----HY 142
Query: 171 LSGGAWDPHDVNAVAATC-ESSVQFWDLRSMGKTNSIEHAH----VRNVDYDTKK-KHLL 224
+ G A +P D N A+ C + +V+ W L S ++E AH V +VDY + K L
Sbjct: 143 VMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLE-AHETKGVNHVDYYPQADKPYL 201
Query: 225 VTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284
+T +D+ + +WD KA I L GHT C +PE I+S D T+ +W +T
Sbjct: 202 LTTSDDKTVKVWDYTT-KALIATLEGHTSNVSFACYHPELP-VIISGSEDGTIKIWHANT 259
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 176 (67.0 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 48/216 (22%), Positives = 102/216 (47%)
Query: 127 LWWSSGRHDKLVSI-DEENIFLWSLDCS-NKNAQVQSKQS-SGMLHYLSGGAWDP-HDVN 182
L W+ + ++S D++ + W ++ + N ++++++ G + AW HD
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGV 237
Query: 183 AVAATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRM 240
+ + + WDLR+ ++I+ H A V + ++ + +L T + + + LWDLR
Sbjct: 238 FGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 241 LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN 300
L+ + H + V +P + + S+GTD +++W +S D+ +E + P
Sbjct: 298 LRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQT-AEDAEDGPP 356
Query: 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ LL + + + +W+ EPW+ S+S D
Sbjct: 357 E----LLFIHGGHTAKISDFSWNPNEPWVVCSVSED 388
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 174 (66.3 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N +++I +AH I CV + + L S D+ I LW + Q+
Sbjct: 300 NYNTMDKIKVFEAHADYIRCVAVHPTLPY-VLSSSDDMLIKLWDWEKGWLCTQI----FE 354
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTK-K 220
G HY+ ++P D N A A+ + +++ W+L S +++ AH++ V DY T
Sbjct: 355 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHLKGVNCVDYFTGGD 413
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L+T +D+ +WD + K+ +Q L GHTH AV +PE I++ D TV +W
Sbjct: 414 KPYLITGSDDHTAKVWDYQT-KSCVQTLEGHTHNVSAVSFHPELP-IIITGSEDGTVRIW 471
Query: 281 LVST 284
+T
Sbjct: 472 HATT 475
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 142 (55.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 56/221 (25%), Positives = 94/221 (42%)
Query: 70 DLSSCPFDQRIFSTVFSTGESYGAAIWQI-PELYGQLNSPQLERIAA----LDAHVGKIN 124
+L P ++ + G GA Q P Q P+ + A L H G++
Sbjct: 11 ELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVY 70
Query: 125 CVLWWSSGRHDKLVSIDEENIFLWSL--DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDV 181
C + +G D I LW++ DC N A ++ + M LHY + G+
Sbjct: 71 CCKFHPNGSTLASAGFDRL-ILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSM----- 123
Query: 182 NAVAATCESSVQFWDLRSMGKTNSIE-HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLR 239
+A+ + +V WD + + ++ H N Y ++ L+ T +D+ + LWD+R
Sbjct: 124 -LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Query: 240 MLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
KA IQ +T+ AV N D I+S G D+ + +W
Sbjct: 183 K-KAAIQTFQ-NTYQVLAVTFNDTSDQ-IISGGIDNDIKVW 220
Score = 60 (26.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
R N L + + DSV GL+ SS ++ ++ + D V V V+PF ++
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKE 271
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 162 (62.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 60/278 (21%), Positives = 116/278 (41%)
Query: 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGK 122
+HP E+ P + I + S G S I+ + + + L H G+
Sbjct: 117 NHPGEVHRARYMPHNPFIIA---SRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGE 173
Query: 123 INCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP--H 179
+ WS+ R L++ ++ + W ++ + + QS H S A D H
Sbjct: 174 -GYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGH--SSNAEDVSFH 230
Query: 180 DV-NAVAATC--ESSVQFWDLR-SMGKTNSIEH-AHVRNVDYDTKKKHLLVTAADESGIH 234
+ N V + + + WDLR S + ++ H A V + ++ +++L T + + +
Sbjct: 231 ALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVA 290
Query: 235 LWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSES 294
LWD+R ++ + L H + V +P Y+ + S+G+D V +W +S PS S
Sbjct: 291 LWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQD---PSSS 347
Query: 295 LVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFAS 332
S + ++ ++ + V +W+ PW S
Sbjct: 348 SAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICS 385
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 141 (54.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSL- 150
GA + P L +P I L H G++ C + +G D I LW++
Sbjct: 43 GALLQAGPPRCSSLQAP----IMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVY 97
Query: 151 -DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE- 207
DC N A ++ + M LHY + G+ +A+ + +V WD + + ++
Sbjct: 98 GDCDNY-ATLKGHSGAVMELHYNTDGSM------LFSASTDKTVAVWDSETGERVKRLKG 150
Query: 208 HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG 266
H N Y ++ L+ T +D+ + LWD+R KA IQ +T+ AV N D
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 267 FILSAGTDSTVNLW 280
I+S G D+ + +W
Sbjct: 209 -IISGGIDNDIKVW 221
Score = 60 (26.2 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
R N L + + DSV GL+ SS ++ ++ + D V V V+PF ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKE 272
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 141 (54.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSL- 150
GA + P L +P I L H G++ C + +G D I LW++
Sbjct: 43 GALLQAGPPRCSSLQAP----IMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVY 97
Query: 151 -DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE- 207
DC N A ++ + M LHY + G+ +A+ + +V WD + + ++
Sbjct: 98 GDCDNY-ATLKGHSGAVMELHYNTDGSM------LFSASTDKTVAVWDSETGERVKRLKG 150
Query: 208 HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG 266
H N Y ++ L+ T +D+ + LWD+R KA IQ +T+ AV N D
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 267 FILSAGTDSTVNLW 280
I+S G D+ + +W
Sbjct: 209 -IISGGIDNDIKVW 221
Score = 60 (26.2 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
R N L + + DSV GL+ SS ++ ++ + D V V V+PF ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKE 272
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 141 (54.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSL- 150
GA + P L +P I L H G++ C + +G D I LW++
Sbjct: 43 GALLQAGPPRCSSLQAP----IMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVY 97
Query: 151 -DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE- 207
DC N A ++ + M LHY + G+ +A+ + +V WD + + ++
Sbjct: 98 GDCDNY-ATLKGHSGAVMELHYNTDGSM------LFSASTDKTVAVWDSETGERVKRLKG 150
Query: 208 HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG 266
H N Y ++ L+ T +D+ + LWD+R KA IQ +T+ AV N D
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 267 FILSAGTDSTVNLW 280
I+S G D+ + +W
Sbjct: 209 -IISGGIDNDIKVW 221
Score = 60 (26.2 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
R N L + + DSV GL+ SS ++ ++ + D V V V+PF ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKE 272
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 142 (55.0 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 56/221 (25%), Positives = 94/221 (42%)
Query: 70 DLSSCPFDQRIFSTVFSTGESYGAAIWQI-PELYGQLNSPQLERIAA----LDAHVGKIN 124
+L P ++ + G GA Q P Q P+ + A L H G++
Sbjct: 11 ELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVY 70
Query: 125 CVLWWSSGRHDKLVSIDEENIFLWSL--DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDV 181
C + +G D I LW++ DC N A ++ + M LHY + G+
Sbjct: 71 CCKFHPNGSTLASAGFDRL-ILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSM----- 123
Query: 182 NAVAATCESSVQFWDLRSMGKTNSIE-HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLR 239
+A+ + +V WD + + ++ H N Y ++ L+ T +D+ + LWD+R
Sbjct: 124 -LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Query: 240 MLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
KA IQ +T+ AV N D I+S G D+ + +W
Sbjct: 183 K-KAAIQTFQ-NTYQVLAVTFNDTSDQ-IISGGIDNDIKVW 220
Score = 60 (26.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
R N L + + DSV GL+ SS ++ ++ + D V V V+PF ++
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKE 271
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 140 (54.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSL- 150
GA + P L +P I L H G++ C + +G D I LW++
Sbjct: 43 GALLQAGPPRCSSLQAP----IMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVY 97
Query: 151 -DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE- 207
DC N A ++ + M LHY + G+ +A+ + +V WD + + ++
Sbjct: 98 GDCDNY-ATLKGHSGAVMELHYNTDGSM------LFSASTDKTVAVWDSETGERVKRLKG 150
Query: 208 HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG 266
H N Y ++ L+ T +D+ + LWD+R KA +Q +T+ AV N D
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK-KAAVQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 267 FILSAGTDSTVNLW 280
I+S G D+ + +W
Sbjct: 209 -IISGGIDNDIKVW 221
Score = 60 (26.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
R N L + + DSV GL+ SS ++ ++ + D V V V+PF ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKE 272
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 165 (63.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 64/240 (26%), Positives = 110/240 (45%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH + ++ + + + S D+ + +W D NK A QS +
Sbjct: 85 NYNTLERVHQFEAHSDYLRSLVVHPTLPY-VISSSDDMLVKMWDWD--NKWAMKQSFE-- 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIE-HAH-VRNVDY-DTKKK 221
G HY+ A +P D N A A+ + +V+ W S ++E H V VDY +K
Sbjct: 140 GHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEK 199
Query: 222 HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWL 281
+++ AD+ + +WD + K +Q L GH +VC +PE I++ DSTV LW
Sbjct: 200 PYIISGADDHLVKIWDYQN-KTCVQTLDGHAQNVSSVCFHPELP-LIITGSEDSTVRLWH 257
Query: 282 VSTSNHDELPSESLVESPNQRANSLLNSYS-DYEDSVYGLAWSSREPWIFASLSYDGRVV 340
+T + + L +A N+ + Y++ L EP + S+ G+++
Sbjct: 258 ANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDEGSVTLKLGREEPAV--SMDSSGKIL 315
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 140 (54.3 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 52/196 (26%), Positives = 86/196 (43%)
Query: 90 SYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWS 149
S GA + P L +P I L H G++ C + G D I LW+
Sbjct: 67 STGALLQSGPPRCSSLQAP----IMLLSGHEGEVYCCKFHPWGNTLASAGFDRL-ILLWN 121
Query: 150 L--DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSI 206
+ DC N A ++ + M LHY + G+ +A+ + +V WD + + +
Sbjct: 122 VYGDCDNY-ATLKGHSGAVMELHYNTDGSM------LFSASTDKTVAVWDSETGERVKRL 174
Query: 207 E-HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY 264
+ H N Y ++ L+ T +D+ + LWD+R KA +Q +T+ AV N
Sbjct: 175 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK-KAAVQTFQ-NTYQVLAVTFNDTS 232
Query: 265 DGFILSAGTDSTVNLW 280
D I+S G D+ + +W
Sbjct: 233 DQ-IISGGIDNDIKVW 247
Score = 59 (25.8 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
R N L + + DSV GL+ SS ++ ++ + D V + V+PF ++
Sbjct: 250 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRIWDVRPFAPKE 298
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 66/287 (22%), Positives = 122/287 (42%)
Query: 78 QRIFSTVFSTGESYGAAIWQIPELYGQLNSP--QLER-----IAALDAHVGKINCVLWWS 130
+ + ++ TG+ + IW I L+SP + R + ++ H + L WS
Sbjct: 200 ESLLASFHETGKVH---IWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTE-GYALDWS 255
Query: 131 SGRHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA-TC 188
+ L+S D N IFL SN Q S + W P + N ++ +C
Sbjct: 256 PFEYS-LLSGDNANEIFLTKY--SNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSC 312
Query: 189 ESSVQFWDLRSMGKTNSIE-HAH----VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243
+ + + WD+R+ KT+++ +AH V + ++T+ +LL T AD +WDLR LK+
Sbjct: 313 DGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKS 372
Query: 244 ------PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
P+ H +++ +P D I G D+ ++LW +S +E E
Sbjct: 373 SSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAAE 432
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV 344
L+ + ++ + + W + P S + G V +++
Sbjct: 433 GLQDVPPQLMFIHMGQQE-IKEMHWHRQIPGTIVSTAMTGINVFKTI 478
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/163 (27%), Positives = 76/163 (46%)
Query: 129 WSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA- 185
WS R ++LV ++ + LW + +S + Y + W PH A
Sbjct: 119 WSQTRGEQLVVSGSWDQTVKLWDPTVGRSLCTFKGHES---IIYST--IWSPHIPGCFAS 173
Query: 186 ATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243
A+ + +++ WD+++ G + H A + + D+ ++LLVT A + + WDLR ++
Sbjct: 174 ASGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQ 233
Query: 244 PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSN 286
P+ EL GHT+ V +P Y + S D TV W S N
Sbjct: 234 PVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRFWNFSKPN 276
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 56/250 (22%), Positives = 107/250 (42%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGM 167
Q++ I + H+G+ L WS +L++ D ++NI LW+ + V + G
Sbjct: 203 QMKPIFSFAGHMGE-GFALDWSPRVTGRLLTGDCQKNIHLWT-PTDGGSWHVDQRPFVGH 260
Query: 168 LHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSMGK-----TNSIEHAHVRNVDYDTKK 220
+ W P + N V A+C ++S++ WD+R+ T + H NV +++
Sbjct: 261 TRSVEDLQWSPTE-NTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRR 319
Query: 221 KHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278
+ L++ D+ + +WDLR K+ P+ H +V +P+ G ++G D +
Sbjct: 320 EPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQIT 379
Query: 279 LWLVSTSNHDEL----PSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334
W ++ E L + P Q LL + E + L W + P + S +
Sbjct: 380 QWDLAVERDPEAGDVEADPGLADLPQQ----LLFVHQG-ETELKELHWHPQCPGLLVSTA 434
Query: 335 YDGRVVVESV 344
G + ++
Sbjct: 435 LSGFTIFRTI 444
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 59/249 (23%), Positives = 111/249 (44%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWS-LDCSNKNAQVQSKQSSG 166
+++ I + H+G+ L WS +L++ D ++NI LW+ D + N V + G
Sbjct: 202 RVKPIFSFAGHMGE-GFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWN--VDQRPFVG 258
Query: 167 MLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSM-GK----TNSIEHAHVRNVDYDTK 219
+ W P + + V A+C ++S++ WD+R+ GK T + H NV ++
Sbjct: 259 HTRSVEDLQWSPTE-DTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSR 317
Query: 220 KKHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV 277
++ L++ D+ + +WDLR K+ P+ H +V +P+ G ++G D+ +
Sbjct: 318 REPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQI 377
Query: 278 NLWLVSTSNHDELPSESLVESPNQRA--NSLLNSYSDYEDSVYGLAWSSREPWIFASLSY 335
W ++ E S P A LL + E + L W + P + S +
Sbjct: 378 TQWDLAVERDPE--SGETETDPGLAALPQQLLFVHQG-ETDLKELHWHPQCPGVLISTAL 434
Query: 336 DGRVVVESV 344
G V ++
Sbjct: 435 SGFTVFRTI 443
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/248 (22%), Positives = 109/248 (43%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGM 167
+++ I + H+G+ L WS +L++ D ++N+ LW+ + V + G
Sbjct: 203 RIKPIFSFAGHMGE-GFALDWSPRVPGRLLTGDCQKNVHLWT-PTEGGSWNVDQRPFVGH 260
Query: 168 LHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSM-GK----TNSIEHAHVRNVDYDTKK 220
+ W P + + V A+C ++S++ WD+R+ GK T + H NV +++
Sbjct: 261 TRSVEDLQWSPTE-DTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRR 319
Query: 221 KHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278
+ L++ D+ + +WDLR K+ P+ H +V +P+ G ++G D+ +
Sbjct: 320 EPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQIT 379
Query: 279 LWLVSTSNHDELPSESLVESPNQRA--NSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
W ++ E S P A LL + E + L W + P + S +
Sbjct: 380 QWDLAVERDPE--SGETETDPGLAALPQQLLFVHQG-ETDLKELHWHPQCPGVLISTALS 436
Query: 337 GRVVVESV 344
G V ++
Sbjct: 437 GFTVFRTI 444
>UNIPROTKB|A8QB65 [details] [associations]
symbol:Bm1_47965 "Ribosome biogenesis protein WDR12
homolog" species:6279 "Brugia malayi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HAMAP:MF_03029 EMBL:DS239429 RefSeq:XP_001901055.1
ProteinModelPortal:A8QB65 GeneID:6104478 KEGG:bmy:Bm1_47965
CTD:6104478 Uniprot:A8QB65
Length = 433
Score = 153 (58.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 61/273 (22%), Positives = 118/273 (43%)
Query: 15 QARCISDVKADTDHTSFLTGTLSLK-EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSS 73
Q +SDV+ T F+ T L+ E V + +++ GT + G F ++W+
Sbjct: 179 QVLMLSDVETHGSST-FIKPTCVLRGHERSVEAIAVNTDGTRTVSGG-FDKMLKVWNT-- 234
Query: 74 CPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGR 133
D+ STVF S + ++ ++ P + L H I +W +
Sbjct: 235 ---DKDDTSTVFEKTRSEKTGKKKRTDIITKI--PMV----TLSGHKDAIVSAVWSPNSA 285
Query: 134 HDKLVSIDEENIFLWSLDCSNK-NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSV 192
+ L + I +W L+ + + N K + + S G + + + V
Sbjct: 286 KEVLTVSWDHTISIWDLELAGQINTLAAKKAFTSISVCCSSGM-------LITGSVDPVV 338
Query: 193 QFWDLRS----MGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE 247
+ WD RS + K + I H + +V ++ K++L ++A+ + + +WD+R K P+ +
Sbjct: 339 RLWDPRSHEGTLVKQSFIGHCGWISSVFWNKVKENLFISASFDKTVKMWDVRSNKTPLYD 398
Query: 248 LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
L GH+ +CC+ + I+S G D T+ +
Sbjct: 399 LVGHSDRI--LCCDWSVNELIVSGGVDCTMKTY 429
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 56/251 (22%), Positives = 112/251 (44%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGM 167
+++ I H+G+ L WS +L++ D ++NI LW+ + V + G
Sbjct: 197 RVKPIFTFAGHMGE-GFALDWSPRVSGRLLTGDCQKNIHLWT-PTDGGSWHVDQRPFMGH 254
Query: 168 LHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRS------MGKTNSIEHAHVRNVDYDTK 219
+ W P + + V A+C ++S++ WD+R+ M T S V +++ ++
Sbjct: 255 TRSVEDLQWSPTE-DTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINW-SR 312
Query: 220 KKHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV 277
++ L++ D+ + +WDLR K+ P+ H +V +P+ G ++G D+ +
Sbjct: 313 REPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQI 372
Query: 278 NLWLVSTSNHDEL-PSES---LVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASL 333
W ++ E +E+ L + P Q LL + E + L W + P + S
Sbjct: 373 TQWDLAVERDPEAGDTETDPGLADLPQQ----LLFVHQG-ETDLKELHWHPQCPGVLVST 427
Query: 334 SYDGRVVVESV 344
+ G V ++
Sbjct: 428 ALSGFTVFRTI 438
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 59/250 (23%), Positives = 111/250 (44%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGM 167
+++ I A H+G+ L WS +L++ D ++NI LW+ S + V + G
Sbjct: 202 RVKPIFAFSGHMGE-GFALDWSPRVPGRLLTGDCQKNIHLWTPTDSG-SWHVDQRPFVGH 259
Query: 168 LHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSMGK-----TNSIEHAHVRNVDYDTKK 220
+ W P + + V A+C ++S++ WD+R+ T H NV +++
Sbjct: 260 TRSVEDLQWSPTE-DTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQ 318
Query: 221 KHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278
+ L++ D+ + +WDLR K+ P+ H +V +P+ G ++G D+ +
Sbjct: 319 EPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQIT 378
Query: 279 LWLVSTSNHDEL-PSES---LVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334
W ++ E +E+ LV P Q LL + E + L W + P + S +
Sbjct: 379 QWDLAVERDPEAGDTETDPGLVGLPQQ----LLFVHQG-ETDLKELHWHPQCPGVLVSTA 433
Query: 335 YDGRVVVESV 344
G V ++
Sbjct: 434 LSGFTVFRTI 443
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 57/250 (22%), Positives = 110/250 (44%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGM 167
+++ I A H+G+ L WS +L++ D ++NI LW+ + V + G
Sbjct: 203 RMKPIFAFSGHMGE-GFALDWSPRVPGRLLTGDCQKNIHLWT-PTDGGSWHVDQRPFVGH 260
Query: 168 LHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSMGK-----TNSIEHAHVRNVDYDTKK 220
+ W P + + V A+C ++S++ WD+R+ T + H NV + +
Sbjct: 261 TRSVEDLQWSPTE-DTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHR 319
Query: 221 KHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278
+ L++ D+ + +WDLR K+ P+ H +V +P+ G ++G D+ +
Sbjct: 320 EPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQIT 379
Query: 279 LWLVSTSNHDEL-PSES---LVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334
W ++ E +E+ L + P Q LL + E + L W + P + S +
Sbjct: 380 QWDLAVERDPEAGDAETDPGLADLPQQ----LLFVHQG-ETDLKELHWHPQCPGVLVSTA 434
Query: 335 YDGRVVVESV 344
G V ++
Sbjct: 435 LSGFTVFRTI 444
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 147 (56.8 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 129 WSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA- 185
WS R ++LV ++ + LW + +S + Y + W PH A
Sbjct: 119 WSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHES---IIYST--IWSPHIPGCFAS 173
Query: 186 ATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243
A+ + +++ WD+++ G I H A + + D+ ++LLVT A + + WDLR ++
Sbjct: 174 ASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQ 233
Query: 244 PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
P+ EL GHT+ V +P + + S D TV W
Sbjct: 234 PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 270
Score = 41 (19.5 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVV 341
+ +SLL + + + GL +S + P A S+D + +
Sbjct: 274 KPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKI 313
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 150 (57.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 47/186 (25%), Positives = 88/186 (47%)
Query: 100 ELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQV 159
++Y P I + H ++ V + + R L S ++ + LW++D + A V
Sbjct: 86 KIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMD---RPASV 142
Query: 160 QSKQSSGMLHYLSGGAWDP-H-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214
++ + Y + W+P H DV A +A+ + +++ WD+R G T I AH + +
Sbjct: 143 RTFKEHAYCVYQA--VWNPKHGDVFA-SASGDCTLRIWDVREPGSTMIIP-AHDFEILSC 198
Query: 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274
D++ +L T++ + + +WD+R + P+ L GH + V +P I S D
Sbjct: 199 DWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYD 258
Query: 275 STVNLW 280
+V LW
Sbjct: 259 MSVCLW 264
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 39/155 (25%), Positives = 71/155 (45%)
Query: 176 W-DPHDVNAVAATCESSVQFWDLRSMGKTNSI----EHAH-VRNVDYDTKKKHLLVTAAD 229
W + HD +AA + SV+ +D +N I EHA V++VDY+ ++ +T++
Sbjct: 68 WSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSW 127
Query: 230 ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDE 289
+ + LW + A ++ H + + NP++ SA D T+ +W V
Sbjct: 128 DDTVKLWAMDR-PASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE----- 181
Query: 290 LPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS 324
P +++ P L ++ Y+D + LA SS
Sbjct: 182 -PGSTMI-IPAHDFEILSCDWNKYDDCI--LATSS 212
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 150 (57.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 43/157 (27%), Positives = 75/157 (47%)
Query: 129 WSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA- 185
WS R ++LV ++ + +W N + +S + Y + W PH A
Sbjct: 114 WSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHES---VIYST--IWSPHIPGCFAS 168
Query: 186 ATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243
A+ + +++ WD+++ G I H A + + D+ ++LLVT A + + WDLR ++
Sbjct: 169 ASGDQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQ 228
Query: 244 PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
P+ EL GHT+ V +P + + S D TV W
Sbjct: 229 PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 265
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 157 (60.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 53/179 (29%), Positives = 85/179 (47%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LE++ + +AH + C+ + + L S D+ I LW+ + K Q +
Sbjct: 85 NYNTLEKVHSFEAHSDYLRCIAVHPT-QPLVLTSSDDMLIKLWNWE---KMWACQ-RVFE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIE-HAH-VRNVDY-DTKKK 221
G HY+ ++P D N A A+ + +V+ W L S ++E H V VDY K
Sbjct: 140 GHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDK 199
Query: 222 HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
L++ AD+ + +WD + K +Q L GH AVC +PE +L+ D TV +W
Sbjct: 200 PYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNISAVCFHPELP-IVLTGSEDGTVRIW 256
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 148 (57.2 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 129 WSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA- 185
WS R ++LV ++ + LW + +S + Y + W PH A
Sbjct: 119 WSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHES---VIYST--IWSPHIPGCFAS 173
Query: 186 ATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243
A+ + +++ WD++S G + H A + + D+ ++LLVT A + + WDLR ++
Sbjct: 174 ASGDQTLRIWDVKSTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQ 233
Query: 244 PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
P+ EL GHT+ V +P + + S D TV W
Sbjct: 234 PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 270
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 56 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 110
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 111 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 169
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH +PE I++ D TV +W
Sbjct: 170 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCASFHPELP-IIITGSEDGTVRIW 227
Query: 281 LVST 284
ST
Sbjct: 228 HSST 231
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 65/301 (21%), Positives = 132/301 (43%)
Query: 35 TLSLKEENEVHLLRLSSGGTELIC----EGLFSHP-----NEIWDLSSCPFDQRIFSTVF 85
T + K++NE+ ++ S GG E+I HP ++ SC F+ + T
Sbjct: 21 TPNKKQKNELQVVS-SGGGREIILGTERTSKLEHPIMQLIGHKGEIYSCKFNS--YGTAL 77
Query: 86 STGESYGAA-IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144
++G S +W + YG+ + + L H G I L WS+ ++ + +++
Sbjct: 78 ASGGSDKEIFLWNV---YGECIN-----YSVLKGHKGTI-LELHWSTDSNEIYTACTDKS 128
Query: 145 IFLWSLDCSNKNAQVQS-KQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT 203
I +W SNK ++ ++ SG+++ P V + + + S + +D RS G T
Sbjct: 129 IGVWD---SNKGELIKRIREHSGVVNSCCPARRGPPLV--ASGSDDRSARIFDTRSKGST 183
Query: 204 NSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNP 262
+ +H + V +V + L +T ++ I +WD+R + P+ L H + +
Sbjct: 184 HLFQHKYPVTSVCFSDASDQL-ITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSK 242
Query: 263 EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAW 322
+ ++LS D++ +W D P PN+ + + +++E ++ +W
Sbjct: 243 D-GAYLLSNSMDNSCKIW-------DIRP----YAPPNRNIKTFNGAQNNFEKNLIKSSW 290
Query: 323 S 323
S
Sbjct: 291 S 291
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 56 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 110
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 111 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 169
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH +PE I++ D TV +W
Sbjct: 170 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCASFHPELP-IIITGSEDGTVRIW 227
Query: 281 LVST 284
ST
Sbjct: 228 HSST 231
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 198
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH +PE I++ D TV +W
Sbjct: 199 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCASFHPELP-IIITGSEDGTVRIW 256
Query: 281 LVST 284
ST
Sbjct: 257 HSST 260
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 198
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH +PE I++ D TV +W
Sbjct: 199 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCASFHPELP-IIITGSEDGTVRIW 256
Query: 281 LVST 284
ST
Sbjct: 257 HSST 260
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 198
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH +PE I++ D TV +W
Sbjct: 199 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCASFHPELP-IIITGSEDGTVRIW 256
Query: 281 LVST 284
ST
Sbjct: 257 HSST 260
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 198
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH +PE I++ D TV +W
Sbjct: 199 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCASFHPELP-IIITGSEDGTVRIW 256
Query: 281 LVST 284
ST
Sbjct: 257 HSST 260
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 198
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH +PE I++ D TV +W
Sbjct: 199 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCASFHPELP-IIITGSEDGTVRIW 256
Query: 281 LVST 284
ST
Sbjct: 257 HSST 260
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 68/244 (27%), Positives = 104/244 (42%)
Query: 44 VHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYG 103
+ L L+SG + E + +H +W +S P DQR F T G W EL
Sbjct: 477 LQLYDLASG---TLLETIAAHDGALWSMSLSP-DQRGFVT---GGADKAVKFWDF-ELVT 528
Query: 104 QLNSPQLERIAALDAHVGKIN-CVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK 162
NS Q +R++ +++ VL S + KL+++ LDC+ K V +
Sbjct: 529 DKNSTQ-KRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVS-------LLDCTVKVFYVDTL 580
Query: 163 QSSGML--HYLSGGAWD-PHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHAHVRNVDY-- 216
+ L H L D HD +A + + +V+ W L G + AH +V Y
Sbjct: 581 KFFLSLYGHKLPVLCMDISHDGALIATGSADRNVKIWGL-DFGDCHRSLFAHDDSVMYLR 639
Query: 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276
K HL TA + I WD + IQ L GH W + +P D +++SA D +
Sbjct: 640 FVPKSHLFFTAGKDHKIKQWDADKFEH-IQTLEGHHQEIWCLAVSPSGD-YVVSASHDKS 697
Query: 277 VNLW 280
+ LW
Sbjct: 698 LRLW 701
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 155 (59.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 53/184 (28%), Positives = 82/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 198
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH V +PE I++ D TV +W
Sbjct: 199 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCVSFHPELP-IIITGSEDGTVRIW 256
Query: 281 LVST 284
ST
Sbjct: 257 HSST 260
Score = 39 (18.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 269 LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304
L + V LW S S ++ +ESL + P + N
Sbjct: 762 LPSQVSRVVKLWRESLSKVNQKAAESLAD-PTEYEN 796
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 143 (55.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/158 (25%), Positives = 75/158 (47%)
Query: 129 WSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA- 185
WS R ++LV ++ + +W N + +S + Y + W PH A
Sbjct: 114 WSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHES---VIYST--IWSPHIPGCFAS 168
Query: 186 ATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242
A+ + +++ WD+++ G + AH + + D+ ++L+VT A + + WDLR ++
Sbjct: 169 ASGDQTLRIWDVKTAG-VRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVR 227
Query: 243 APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
P+ EL GHT+ V +P + + S D TV W
Sbjct: 228 QPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 265
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 143 (55.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/158 (25%), Positives = 75/158 (47%)
Query: 129 WSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA- 185
WS R ++LV ++ + +W N + +S + Y + W PH A
Sbjct: 114 WSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHES---VIYST--IWSPHIPGCFAS 168
Query: 186 ATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242
A+ + +++ WD+++ G + AH + + D+ ++L+VT A + + WDLR ++
Sbjct: 169 ASGDQTLRIWDVKTTG-VRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVR 227
Query: 243 APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
P+ EL GHT+ V +P + + S D TV W
Sbjct: 228 QPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 265
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 144 (55.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 53/194 (27%), Positives = 86/194 (44%)
Query: 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSL- 150
GA + P L +P I L H G++ C + +G D I LWS+
Sbjct: 43 GALLQTGPPRCSSLQAP----IMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWSVY 97
Query: 151 -DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE- 207
DC N A ++ + M LHY + G+ +A+ + +V WD + + ++
Sbjct: 98 GDCDNY-ATLKGHSGAVMELHYNTDGSM------LFSASTDKTVAVWDSETGERVKRLKG 150
Query: 208 HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG 266
H N Y ++ L+ T +D+ + LWD+R KA IQ +T+ AV N D
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQ 208
Query: 267 FILSAGTDSTVNLW 280
I+S G D+ + +W
Sbjct: 209 -IISGGIDNDIKVW 221
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 53/181 (29%), Positives = 87/181 (48%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E++ +AH I + S + L S D+ I LW+ D + K Q G HY
Sbjct: 88 EKVTQFEAHPDYIRSIAVHPSKPYI-LTSSDDLTIKLWNWDHNWKLEQT----FEGHQHY 142
Query: 171 LSGGAWDPHDVNAVAATC-ESSVQFWDLRSMGKTNSIEHAH----VRNVDYDTKK-KHLL 224
+ ++P D N A+ C + +V+ W L S + N AH V VDY + K L
Sbjct: 143 VMSVNFNPKDPNTFASACLDRTVKIWSLGS-SQPNFTLIAHEAKGVNYVDYYPQADKPYL 201
Query: 225 VTAADESGIHLWDLRMLKAPIQELPGH-THWTWAVCCNPEYDGFILSAGTDSTVNLWLVS 283
+T++D+ I +WD + K+ + L GH ++ ++A+ +PE I+S D T+ W +
Sbjct: 202 ITSSDDKTIKVWDYQT-KSCVATLEGHLSNVSFAIF-HPELP-IIVSGSEDGTIRFWNSN 258
Query: 284 T 284
T
Sbjct: 259 T 259
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 149 (57.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 67/245 (27%), Positives = 105/245 (42%)
Query: 43 EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY 102
++ L L+SG + E + +H +W +S P DQR F T G W EL
Sbjct: 477 KLQLYDLASGN---LLETIDAHDGALWSMSLSP-DQRGFVT---GGADKSVKFWDF-ELV 528
Query: 103 GQLNSPQLERIAALDAHVGKIN-CVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS 161
NS Q +R++ +++ VL S + KL+++ LDC+ K V +
Sbjct: 529 KDENSTQ-KRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVS-------LLDCTVKIFYVDT 580
Query: 162 KQSSGML--HYLSGGAWD-PHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHAHVRNVDY- 216
+ L H L D HD +A + + +V+ W L G + AH +V Y
Sbjct: 581 LKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGL-DFGDCHKSLFAHDDSVMYL 639
Query: 217 -DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275
K HL TA + I WD + IQ L GH W + +P D +++S+ D
Sbjct: 640 QFVPKSHLFFTAGKDHKIKQWDADKFEH-IQTLEGHHQEIWCLAVSPSGD-YVVSSSHDK 697
Query: 276 TVNLW 280
++ LW
Sbjct: 698 SLRLW 702
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 144 (55.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 49/219 (22%), Positives = 92/219 (42%)
Query: 127 LWWSSGRHDKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGMLH--YLSGGAWD-PHDVN 182
L WS + L+S D+ I LW ++ + KN + ++Q H + AW H+
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIF-KAHEGVVEDVAWHLRHEYL 242
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEH--AHVRNVD---YDTKKKHLLVTAADESGIHLWD 237
+ + + WDLRS + ++ AH V+ ++ + ++ T + + + L+D
Sbjct: 243 FGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFD 302
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297
LR L + H + V NP+ + + S + +W S DE E VE
Sbjct: 303 LRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW--DLSRIDE---EQTVE 357
Query: 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
LL + + + +W+ E W+ +S++ D
Sbjct: 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 119 (46.9 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 89 ESYGAAIWQIPELYGQLNSPQLER-IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFL 147
E AA Q G S L+ I L H G++ C + +G L S + + L
Sbjct: 24 ELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGA--TLASSGYDRLIL 81
Query: 148 -WSL--DCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT 203
W++ DC N A ++ + M LHY + G+ +A+ + +V WD + +
Sbjct: 82 MWNVYGDCENY-ATLKGHSGAVMELHYNTDGSL------LFSASTDKTVCVWDSETGERV 134
Query: 204 NSIE-HAHVRNVDYDTKK-KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCN 261
++ H N + ++ L T +D+ + LWD+R KA + +T+ +V N
Sbjct: 135 KRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK-KASVHTFQ-NTYQVLSVTFN 192
Query: 262 PEYDGFILSAGTDSTVNLW 280
D I+S G D+ + +W
Sbjct: 193 DTSDQ-IISGGIDNDIKVW 210
Score = 63 (27.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSRK 351
R N L+ S + DSV GL+ S+ ++ ++ S D V V ++PF ++
Sbjct: 213 RQNKLIYSMQGHGDSVTGLSLSADGSYLLSN-SMDNSVRVWDIRPFAPKE 261
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 140 (54.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 59/243 (24%), Positives = 109/243 (44%)
Query: 49 LSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSP 108
L T ++ F + ++D++ ++ + T S+G+ IW I + G L
Sbjct: 49 LEQNETGIVLLRSFDWNDGLFDVTWSENNEHVLIT--SSGDG-SLQIWDIAKPKGPL--- 102
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSG 166
Q+ + +A+ ++ WS R ++LV ++ LW K+ + K G
Sbjct: 103 QVYKEHTQEAY--SVD----WSQTRGEQLVVSGSWDQTAKLWD-PAVGKSLRT-FKGHEG 154
Query: 167 MLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHL 223
+++ W PH A A+ + +++ WD+++ G I H A + + D+ ++L
Sbjct: 155 VIY---STIWSPHIPGCFASASGDQTLRIWDVKAPGVRLVIPAHQAEILSCDWCKYDENL 211
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVS 283
LVT A + + WDLR ++ P+ L GHT+ V +P + + S D TV W S
Sbjct: 212 LVTGAVDCSLKGWDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFS 271
Query: 284 TSN 286
N
Sbjct: 272 KPN 274
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 129 WSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA 186
WS R ++LV ++ + LW + +S + Y + W PH A+
Sbjct: 119 WSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHES---VIYST--IWSPHIPGCFAS 173
Query: 187 TC-ESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243
+ + +++ WD+++ G + H A + + D+ ++L+VT A + + WDLR ++
Sbjct: 174 SSGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVQQ 233
Query: 244 PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
P+ EL GHT+ V +P + + S D TV W
Sbjct: 234 PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 270
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 140 (54.3 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 64/259 (24%), Positives = 112/259 (43%)
Query: 34 GTLSLKEENEVHLLRLSSGGTEL--ICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESY 91
G+L L E+N + S+ G L +C +S + ++D++ CP+ I +T G
Sbjct: 40 GSLFLLEQNS-NTNSSSTDGQSLGELCRLEWS--DGLFDVAWCPYAADIAATASGDGS-- 94
Query: 92 GAAIWQIPELYGQLNSPQL---ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE-NIFL 147
IW L G+ S QL + + L H ++ + W + L+S + + L
Sbjct: 95 -LQIWC--GLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKL 151
Query: 148 WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA-TCESSVQFWD-LRSMGKT-N 204
W DC+ +N+ + +++ G + P N A+ + + + W+ L GK
Sbjct: 152 W--DCNRQNSITTFVGHNDLIY---GAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLM 206
Query: 205 SIEHAHVRNV---DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCN 261
SIE AH D+ +++LVT + I WDLR ++ + EL + C+
Sbjct: 207 SIE-AHASEALCCDWSHFDRNVLVTGGSDGLIRGWDLRKMRTHVFELYSGEFAVRRLACS 265
Query: 262 PEYDGFILSAGTDSTVNLW 280
P + SA D T +W
Sbjct: 266 PHSAAVLASANYDFTTRIW 284
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 68/245 (27%), Positives = 104/245 (42%)
Query: 43 EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY 102
++ L L+SG + E + +H +W LS P DQR F T G W EL
Sbjct: 477 KLQLYDLASGN---LLETIDAHDGALWSLSLSP-DQRGFVT---GGADKSVKFWDF-ELV 528
Query: 103 GQLNSPQLERIAALDAHVGKINC-VLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS 161
NS Q +R++ +++ VL S + KL+++ LDC+ K V +
Sbjct: 529 KDENSTQ-KRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVS-------LLDCTVKIFYVDT 580
Query: 162 KQSSGML--HYLSGGAWDPHDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNVDY- 216
+ L H L D A+ AT + +V+ W L G + AH +V Y
Sbjct: 581 LKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGL-DFGDCHKSLFAHDDSVMYL 639
Query: 217 -DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275
K HL TA + I WD + IQ L GH W + +P D +++S+ D
Sbjct: 640 RFVPKSHLFFTAGKDRKIKQWDADKFEH-IQTLEGHHQEIWCLAVSPSGD-YVVSSSHDK 697
Query: 276 TVNLW 280
++ LW
Sbjct: 698 SLRLW 702
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 150 (57.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 52/184 (28%), Positives = 82/184 (44%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW + +QV
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPTQPYI-LTSSDDMLIKLWDWEKKWSCSQV----FE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHDKGVNCIDYYSGGD 198
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q L GH V +PE I++ D TV +W
Sbjct: 199 KPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCVNFHPELP-IIITGSEDGTVRIW 256
Query: 281 LVST 284
ST
Sbjct: 257 HSST 260
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 269 LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304
L + V LW S S ++ +ESL + P + N
Sbjct: 762 LPSQVSRVVKLWRESLSKVNQKAAESLAD-PTEYEN 796
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/224 (22%), Positives = 95/224 (42%)
Query: 129 WSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187
WS +L + D N IF+ + S + ++ G + W P + V A+
Sbjct: 258 WSPKIAGRLATGDCNNSIFV--TNASESTWKTDTQAFKGHTESVEDIQWSPSE-EKVFAS 314
Query: 188 C--ESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLK- 242
C + +V+ WD+R +++ H A V + + ++LLV+ D+ +WDLR K
Sbjct: 315 CSIDQTVRIWDIRKPKPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKD 374
Query: 243 -APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDE--LPSESLVESP 299
+P+ + HT ++ NP + ++ + +D V +W S E + + +
Sbjct: 375 NSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANPDDD 434
Query: 300 NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVES 343
Q L + D + + W + P + S S DG + +S
Sbjct: 435 FQYPPQLFFIHQGQHD-IKEVHWHPQIPHVAISTSIDGFNIFKS 477
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/184 (27%), Positives = 80/184 (43%)
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165
N LER+ +AH I C+ + + L S D+ I LW D +QV
Sbjct: 85 NYNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQV----FE 139
Query: 166 GMLHYLSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD----YDTKK 220
G HY+ +P D N A A+ + +++ W L S ++E H + V+ Y
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLE-GHEKGVNCIDYYSGGD 198
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
K L++ AD+ + +WD + K +Q GH +PE I++ D TV +W
Sbjct: 199 KPYLISGADDRLVKIWDYQN-KTCVQTPEGHAQNVSCATFHPELP-IIITGSEDGTVRIW 256
Query: 281 LVST 284
ST
Sbjct: 257 HSST 260
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 53/234 (22%), Positives = 107/234 (45%)
Query: 121 GKINCVLWWSSGRHDKLVSIDE-ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH 179
GK L WSS + L + D + I+LW + + A V + +G + AW P
Sbjct: 228 GKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWA-VGANPLTGHKKSVEDLAWSPT 286
Query: 180 DVNAVAA-TCESSVQFWDLRSMGKTN---SIEHAHVRNVDYDTKKKH--LLVTAADESGI 233
+ +A+ + + S++ WD RS K +++ AH +V+ + +H L+V+ D+ +
Sbjct: 287 ETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHENLIVSGGDDGEL 346
Query: 234 HLWDLRMLK--APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELP 291
+W L+ ++ P+ H +V +P +++G D +W ++T E
Sbjct: 347 KIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIAT----EAD 402
Query: 292 SESLVES-PNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV 344
++ +E P Q L+ + ++ V + W + P + + S DG V +++
Sbjct: 403 GQTNIEGVPPQ----LMFVHMG-QNEVKEVHWHQQIPGLAINTSIDGFNVFKTI 451
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 65/244 (26%), Positives = 104/244 (42%)
Query: 44 VHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYG 103
+ L L+SG + E + +H +W +S P DQR F T G W EL
Sbjct: 477 MQLYDLASGN---LLETIAAHDGALWSMSLSP-DQRGFVT---GGADKAVKFWDF-ELVT 528
Query: 104 QLNSPQLERIAALDAHVGKIN-CVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK 162
NS Q +R++ + +++ VL+ +L+++ LDC+ K V +
Sbjct: 529 DKNSTQ-KRLSVKQTRILQLDEDVLYVCYSPDQRLLAVS-------LLDCTVKIFYVDTL 580
Query: 163 QSSGML--HYLSGGAWD-PHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHAHVRNVDY-- 216
+ L H L D HD +A + + +V+ W L G + AH +V +
Sbjct: 581 KFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGL-DFGDCHRSLFAHDDSVMHLR 639
Query: 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276
K HL TA + I WD + IQ L GH W + +P D +++SA D +
Sbjct: 640 FVPKSHLFFTAGKDHKIKQWDADKFEH-IQTLEGHHQEIWCLAVSPSGD-YVVSASHDKS 697
Query: 277 VNLW 280
+ LW
Sbjct: 698 LRLW 701
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 176 WDPHDVNAVA-ATCESSVQFWDLRSMGKTNSIEHAHVRNVD-----YDTKKKHLLVTAAD 229
W P++ N A A+ + +V+ WD+RS ++ ++ + + N D + + HLL T AD
Sbjct: 311 WSPNEKNVFASASSDGTVKVWDVRSKSRSPAV-NVKISNTDVNVMTWSKQTSHLLATGAD 369
Query: 230 ESGIHLWDLRMLK------APIQELPG-----HTHWTWAVCCNPEYDGFILSAGTDSTVN 278
+ +WDLR K API P H ++ +P D I D+TV
Sbjct: 370 DGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVGSADNTVT 429
Query: 279 LWLVSTSNHDELPSES-LVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDG 337
LW ++ +E E+ L + P Q LL + Y +SV + W ++ P + G
Sbjct: 430 LWDLAVELDEEESREAGLADVPPQ----LL--FVHYMESVKEVHWQAQMPGTLMATGSGG 483
Query: 338 RVVVESV 344
V +++
Sbjct: 484 FGVFKTI 490
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/286 (20%), Positives = 103/286 (36%)
Query: 61 LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120
L+SHP + P D +TV + + E Y + L+ L H
Sbjct: 125 LYSHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHT 184
Query: 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN--AQVQSKQSSGMLHYLSGGAWD- 177
V W + + + + W L+ N++ A V S +S +
Sbjct: 185 QPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHY 244
Query: 178 PHDVNAVAATCESSVQFWDLR----SMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADE 230
H + + + + D+R S S+ HAH + +V ++ +L T + +
Sbjct: 245 KHQDLLASVSYDQYLHVHDIRRPDASTKPARSV-HAHSGPIHSVAFNPHNDFILATCSTD 303
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDEL 290
I LWDLR L + L GH + +P + + S D +W +S D+
Sbjct: 304 KTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQ- 362
Query: 291 PSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
P+E + P + LL + + + W W A+ + D
Sbjct: 363 PAEEAQDGPPE----LLFMHGGHTSCTIDMDWCPNYNWTMATAAED 404
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 44/217 (20%), Positives = 91/217 (41%)
Query: 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAV-AATCESSVQFWDLRSM 200
+ +F+W L + + + S ++ AW+ + + +A+ + WDL+S
Sbjct: 151 DSEVFIWDLSDPTQPSALNPGSKSQQSSDITCVAWNKKVAHILGSASYNGYIVIWDLKSK 210
Query: 201 GKTNSIEHAH----VRNVDYDTKKKHLLVTAADESG---IHLWDLRMLKAPIQELPGHTH 253
+I + R++ + + +V A+++ I WDLR +P++ + GH
Sbjct: 211 KTLMTINDRNRKCKYRSIVWHPSEATQIVAASEDDDHPVIQAWDLRNTTSPVKSMEGHKK 270
Query: 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSN-----HDELPSESLVESPNQRANSLLN 308
W + P + +LS G D+ W +D ++ + N + N
Sbjct: 271 GVWGLSWCPSDNALLLSTGKDNKTFCWNFDRQEILCEINDNNSRNNINNNSNNSNSDNNN 330
Query: 309 SYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345
+D + + WS R P + ++ SY G+V V S++
Sbjct: 331 GNTDPNAWNFEVQWSPRVPALLSTSSYVGKVNVYSLQ 367
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 143 (55.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 67/245 (27%), Positives = 104/245 (42%)
Query: 43 EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY 102
++ L L+SG + E + +H +W LS P DQR F T G W EL
Sbjct: 477 KLQLYDLASGN---LLETVDAHDGALWSLSLSP-DQRGFVT---GGADKSVKFWDF-ELV 528
Query: 103 GQLNSPQLERIAALDAHVGKINC-VLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS 161
NS Q +R++ +++ VL S + KL+++ LDC+ K V +
Sbjct: 529 KDENSTQ-KRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVS-------LLDCTVKIFYVDT 580
Query: 162 KQSSGML--HYLSGGAWDPHDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNVDY- 216
+ L H L D A+ AT + +V+ W L G + AH +V Y
Sbjct: 581 LKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGL-DFGDCHKSLFAHDDSVMYL 639
Query: 217 -DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275
K HL TA + I WD + +Q L GH W + +P D +++S+ D
Sbjct: 640 KFVPKSHLFFTAGKDRKIKQWDADKFEH-VQTLEGHHQEIWCLAISPSGD-YVVSSSHDK 697
Query: 276 TVNLW 280
++ LW
Sbjct: 698 SLRLW 702
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 49/201 (24%), Positives = 89/201 (44%)
Query: 82 STVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141
+ V S+G+ G + +P G LN+P +E L H G++ V + + +H S+D
Sbjct: 34 AVVKSSGQD-GTLVQAVPRTSG-LNAPIME----LTGHSGEVFAVRFDPTAQHIASGSMD 87
Query: 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG 201
+I LW+ +N + S +L W +A+ + ++ WD+ S
Sbjct: 88 R-SILLWNTYGQCENYGILSGHKGAILDL----QWSRDSKTIFSASADMTLASWDIESGQ 142
Query: 202 KTNS-IEHAHVRN-VDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVC 259
+ I H V N V+ + + +LV+A+D+ + +WD R +A I L T
Sbjct: 143 RIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEA-IDYL--ETELPITAV 199
Query: 260 CNPEYDGFILSAGTDSTVNLW 280
E + S G D+ +++W
Sbjct: 200 AQSEAGNEVFSGGIDNAIHVW 220
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 33/139 (23%), Positives = 64/139 (46%)
Query: 207 EHAHVRN-VDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYD 265
+H N + ++ + +L T + + I LWDLR LK + L HT ++ +P +
Sbjct: 259 QHRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTKLHTLENHTDSVTSISWHPFEE 318
Query: 266 GFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR 325
+ SA D + W +S + ++ P E + P + LL + + + + +W+
Sbjct: 319 AVLASASYDRKIMFWDLSRAGEEQTP-EDAQDGPPE----LLFMHGGHTNRISDFSWNLN 373
Query: 326 EPWIFASLSYDGRVVVESV 344
+PW+ S + D + V V
Sbjct: 374 DPWVLCSAAEDNLLQVWKV 392
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGM 167
QL A L+ H G + L + D L+S +++I LW+L + N V ++ +G
Sbjct: 4 QLVLRATLEGHSGWVTS-LSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGH 62
Query: 168 LHYLSGGA--WDPHDVNAVAATCESSVQFWDLRSMGKTNS-IEH-AHVRNVDYDTKKKHL 223
H++S A +D H A++A+ + +++ WDL T+ + H + V +V + +
Sbjct: 63 SHFVSDCALSFDSH--YALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQV 120
Query: 224 LVTAADESGIHLWDL-RMLKAPIQELPGHTHWTWAVCCNPEYDGF-ILSAGTDSTVNLWL 281
+ + D++ I +W++ K I + GH+ W V +P D +SAG D V +W
Sbjct: 121 VSGSRDKT-IKIWNIIGNCKYTITD-GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWD 178
Query: 282 VST 284
+ T
Sbjct: 179 LET 181
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 136 (52.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 49/221 (22%), Positives = 94/221 (42%)
Query: 129 WSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187
WS L + D +I +W+ + +V + +G + W P++ +V A+
Sbjct: 230 WSPSADGVLATGDCRRDIHVWT-PVEDGTWKVDQRPLAGHSQSVEDLQWSPNE-RSVLAS 287
Query: 188 C--ESSVQFWDLRSMGKTNSI---EHAHVRNVDYDT--KKKHLLVTAADESGIHLWDLRM 240
C + +++ WD R+ + + E AH +V+ + + + + + D+ +H+WDLR
Sbjct: 288 CSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFIASGGDDGYLHIWDLRQ 347
Query: 241 L--KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW-LVSTSNHDELPSESLVE 297
K PI HT V +P + S G D + LW L + D+ + E
Sbjct: 348 FQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNE 407
Query: 298 SP-NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDG 337
N+ LL + ++ + L W + P + S ++ G
Sbjct: 408 DVLNKLPPQLLFIHQGQKE-IKELHWHPQLPGVLLSTAHSG 447
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 139 (54.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E++ +AH I ++ + + L S D+ I ++ D S K Q G Y
Sbjct: 89 EKVTQFEAHPDYIRALVVHPT-QPFLLTSSDDMTIKCFNWDMSWKCVQT----FEGHSRY 143
Query: 171 LSGGAWDPHDVNAVAATC-ESSVQFWDLRSMGKTNSIEHAHVRNVDY----DTKKKHLLV 225
+ A +P D N A++C + +V+ W S N AH R V+Y K L+
Sbjct: 144 VMSLAINPKDTNTFASSCLDGTVKVWSFGS-SVANFTLQAHDRGVNYVNYYPAGDKPYLI 202
Query: 226 TAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
TA D++ I +WD + KA ++ L GHT+ + ++ I+S D TV +W
Sbjct: 203 TAGDDNLIKVWDYQT-KACVRILEGHTNNVSFAFFHSKFP-IIISGSEDGTVKIW 255
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 44/173 (25%), Positives = 84/173 (48%)
Query: 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172
+ + H+ ++ V + SG++ S D+ W L N A++ ++ Y
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKT----WRLWDINTGAELLLQEGHSRSVY-- 385
Query: 173 GGAWDPHDVNAVAATC--ESSVQFWDLRSMGKTNSIEHAHVR---NVDYDTKKKHLLVTA 227
G A+ D A+AA+C +S + WDLR+ G++ + H++ +V++ HL +
Sbjct: 386 GIAFQ-QD-GALAASCGLDSLARVWDLRT-GRSILVFQGHIKPVFSVNFSPNGYHL-ASG 441
Query: 228 ADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
+++ +WDLRM K+ + +P H + V P+ F+ +A D VN+W
Sbjct: 442 GEDNQCRIWDLRMRKS-LYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 40/153 (26%), Positives = 72/153 (47%)
Query: 135 DKLVSID-EENIFLWSLDCS-NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSV 192
D ++S ++ + +W L + N K+ G H++S A++ + + ++
Sbjct: 29 DTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTL 88
Query: 193 QFWDLRSMGKTNSIEHAHVRNV---DYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQEL 248
+ WDL + GKT H ++V + + ++ + D++ I LW+ L K IQE
Sbjct: 89 RLWDLAA-GKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKT-IKLWNTLAECKFTIQE- 145
Query: 249 PGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
GHT W V +P + I+S G D TV +W
Sbjct: 146 DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVW 178
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 133 (51.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWD 196
+ S +++I LW L +K+ V ++ +G H++ A++ + + ++ WD
Sbjct: 32 VTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD 91
Query: 197 LRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPGHTH 253
L + T + H V +V + T + + V+A+ + I LW+ L K I E GH
Sbjct: 92 LATGESTRRFVGHTKDVLSVAFSTDNRQI-VSASRDRTIKLWNTLGECKYTISEADGHKE 150
Query: 254 WTWAVCCNPE-YDGFILSAGTDSTVNLW 280
W V +P I+SA D TV +W
Sbjct: 151 WVSCVRFSPNTLVPTIVSASWDKTVKVW 178
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 138 (53.6 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 63/239 (26%), Positives = 113/239 (47%)
Query: 123 INCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDV 181
I V + G+H LVS ++N I LW L S ++ S +H + A+ P D
Sbjct: 1005 IRAVAFSPDGKH--LVSGSDDNTIKLWDLATSELQQSLEDHSRS--VHAV---AFSPDDK 1057
Query: 182 NAVAATCESSVQFWDLRSMGKTNSIE-HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLR 239
+++ +S+++ WD + ++E H+ VR+V + K LL + + + I LW+
Sbjct: 1058 QLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGK-LLASNSYDGTIKLWN-- 1114
Query: 240 MLKAPIQE-LPGHTHWTWAVCCNPEYDGFILSAGT-DSTVNLW------LVST-SNHDEL 290
L +Q+ L G + W +V +P DG L++G DST+ LW L+ T H +
Sbjct: 1115 PLTGELQQTLTGRSDWVDSVAFSP--DGKQLASGYYDSTIKLWDSATGELLQTLEGHSDR 1172
Query: 291 PSESLVESPNQR--ANSLLNSYSDYEDSVYG---LAWSSREPWIFA-SLSYDGRVVVES 343
+S+V SP+ + A+ + + D G + W+ + + S DG+++ S
Sbjct: 1173 -IQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASS 1230
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 54/224 (24%), Positives = 99/224 (44%)
Query: 67 EIWDLSSCPFDQRIFS---TVFSTGESYGAAIWQIPELYGQLN--SPQLERIA-ALDAHV 120
+IWDL++ Q + S +V S S + L + +P + +L+
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 121 GKINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH 179
G + V + G+ KL S E+N + LW+ + + Q S + A+ P
Sbjct: 919 GWVKSVAFSPDGK--KLASGSEKNTVKLWN-PATGELLQTLEGHSQSVRSV----AFSPD 971
Query: 180 DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLW 236
+++ +++++ W+ + G+ H +R V + KHL V+ +D++ I LW
Sbjct: 972 GKQLASSSSDTTIKLWN-STTGELQQTFKGHDLWIRAVAFSPDGKHL-VSGSDDNTIKLW 1029
Query: 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
DL + Q L H+ AV +P+ D + S+ DST+ LW
Sbjct: 1030 DLATSELQ-QSLEDHSRSVHAVAFSPD-DKQLASSSLDSTIKLW 1071
Score = 48 (22.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 24/109 (22%), Positives = 45/109 (41%)
Query: 41 ENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPE 100
+N + L ++G EL+ + HP+ IW ++ P + + S + IW +
Sbjct: 813 DNTIDLWDSATG--ELL-QTFEGHPHSIWSVAFAPDGKELASA----SDDSTIKIWDLAT 865
Query: 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWS 149
G+L LD+H + V + G+ S+D I +W+
Sbjct: 866 --GELQQ-------TLDSHSQSVRSVAFSPDGKLLASSSLDS-TIKVWN 904
Score = 42 (19.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 98 IPELYGQLNSPQLERIAALDA---HVGKINCVLWWSSGRHDKLVSIDEENIFLW 148
+ L G L P E++AAL VG VL + G+ K+ + +N F W
Sbjct: 52 LESLNGMLQGPDREKLAALHKISDDVGTCKVVLE-NLGK--KVNPENTQNSFRW 102
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 131 (51.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 36/171 (21%), Positives = 72/171 (42%)
Query: 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172
I + + H ++ V W + + +++I +W N K + +
Sbjct: 97 IKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIW-----NPRMDRSLKTFREHRYCIY 151
Query: 173 GGAWDPHDVNAVAATC-ESSVQFWDLRSMGKTNSIE-HAH-VRNVDYDTKKKHLLVTAAD 229
W P + + A+ + +++ WD R N+I+ H H + D++ +VT +
Sbjct: 152 SAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSV 211
Query: 230 ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
+ I +WD+R P L GHT+ + C+P + + S D +V +W
Sbjct: 212 DKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVW 262
>UNIPROTKB|G4MXK2 [details] [associations]
symbol:MGG_01236 "WD repeat-containing protein slp1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001232 KO:K03363 RefSeq:XP_003714140.1
ProteinModelPortal:G4MXK2 EnsemblFungi:MGG_01236T0 GeneID:2679415
KEGG:mgr:MGG_01236 Uniprot:G4MXK2
Length = 593
Score = 135 (52.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 126 VLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAV 184
+L WSSG V+I E ++++WS D + + +++ + Y+S W
Sbjct: 287 LLDWSSGNQ---VAIGLERSVYVWSADEGSVSCLLETSPDT----YVSSVKWSADGAYVS 339
Query: 185 AATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP 244
VQ WD+ K S+ H H V KHLL T A + D+R+ +
Sbjct: 340 VGMGTGEVQIWDVAEGAKVRSM-HGHDTRVSVMGWNKHLLSTGARSGLVFNHDVRIAEHK 398
Query: 245 IQELPGHTHWTWAVCCNPEY--DGFILSAG-TDSTVNLW 280
+ EL HT + C E+ DG L+ G D+ V++W
Sbjct: 399 VAELVSHT----SEVCGLEWRSDGAQLATGGNDNLVSIW 433
>ZFIN|ZDB-GENE-040426-712 [details] [associations]
symbol:fzr1 "fizzy/cell division cycle 20 related 1
(Drosophila)" species:7955 "Danio rerio" [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-712 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000195514 HOVERGEN:HBG001024
KO:K03364 GeneTree:ENSGT00580000081606 CTD:51343 OMA:KHTNELV
EMBL:CU861651 EMBL:BX004774 EMBL:BC048038 IPI:IPI00500321
RefSeq:NP_956547.1 UniGene:Dr.75885 STRING:Q7ZUP9
Ensembl:ENSDART00000015891 GeneID:393223 KEGG:dre:393223
InParanoid:Q7ZUP9 NextBio:20814287 Uniprot:Q7ZUP9
Length = 495
Score = 133 (51.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 63/285 (22%), Positives = 118/285 (41%)
Query: 29 TSFLTGTLSLKEENE-VHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFST 87
TS +T L E + V + S G L+ G +IWD ++ +++F+ T
Sbjct: 218 TSQVTRLCDLSVEGDSVTSVGWSERGN-LVAVGTHKGFVQIWDATA---GKKLFALEGHT 273
Query: 88 GESYGAAIWQIPELYG----------QLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137
GA W +L + +P L+ L H ++ C L WS+ H L
Sbjct: 274 AR-VGALAWNADQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQEV-CGLKWSTD-HQLL 330
Query: 138 VSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQ 193
S +N + +W N ++ + +Q + L + AW PH +A+ T + ++
Sbjct: 331 ASGGNDNKLLVW-----NHSSVLPMQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIR 385
Query: 194 FWDLRSMGKTNSIEH-AHVRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGH 251
FW+ + I+ + V N+ + L+ T ++ I +W L + +L GH
Sbjct: 386 FWNTLTAQPLQCIDTGSQVCNLAWSKHTNELVSTHGYSQNQILVWKYPSL-TQVAKLTGH 444
Query: 252 THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296
++ + +P+ + + AG D T+ W V + S S++
Sbjct: 445 SYRVLYLAMSPDGEAIVTGAG-DETLRFWNVFSKTRSTKESVSVL 488
>UNIPROTKB|Q12834 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9606 "Homo sapiens" [GO:0051301 "cell division"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050773
"regulation of dendrite development" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0090129
"positive regulation of synapse maturation" evidence=ISS]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=ISS] [GO:0005819 "spindle" evidence=TAS] [GO:0007049 "cell
cycle" evidence=TAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005813 GO:GO:0048471 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0043234 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007094 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
EMBL:CH471059 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0051436 GO:GO:0050773 GO:GO:0000922 Reactome:REACT_8017
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0051437
GO:GO:0040020 GO:GO:0000236 PDB:4GGD PDBsum:4GGD GO:GO:0051488
KO:K03363 EMBL:U05340 EMBL:AF099644 EMBL:AK312780 EMBL:BT007388
EMBL:DQ473545 EMBL:AL139289 EMBL:BC000624 EMBL:BC001088
EMBL:BC006272 EMBL:BC009425 EMBL:BC009426 EMBL:BC010044
EMBL:BC012803 EMBL:BC012827 EMBL:BC013303 EMBL:BC015998
EMBL:BC024257 EMBL:BC031294 EMBL:BC110321 IPI:IPI00329526
PIR:A56021 RefSeq:NP_001246.2 UniGene:Hs.524947 PDB:4GGA PDB:4GGC
PDBsum:4GGA PDBsum:4GGC ProteinModelPortal:Q12834 SMR:Q12834
DIP:DIP-29655N IntAct:Q12834 MINT:MINT-2211271 STRING:Q12834
PhosphoSite:Q12834 DMDM:37537762 PaxDb:Q12834 PRIDE:Q12834
DNASU:991 Ensembl:ENST00000310955 Ensembl:ENST00000372462
GeneID:991 KEGG:hsa:991 UCSC:uc001cix.3 CTD:991
GeneCards:GC01P043824 H-InvDB:HIX0034879 HGNC:HGNC:1723
HPA:CAB004525 MIM:603618 neXtProt:NX_Q12834 PharmGKB:PA26257
HOGENOM:HOG000195514 HOVERGEN:HBG001024 InParanoid:Q12834
OMA:RTPGKSN OrthoDB:EOG4CC414 PhylomeDB:Q12834 GenomeRNAi:991
NextBio:4160 PMAP-CutDB:Q12834 ArrayExpress:Q12834 Bgee:Q12834
CleanEx:HS_CDC20 Genevestigator:Q12834 GermOnline:ENSG00000117399
Uniprot:Q12834
Length = 499
Score = 133 (51.9 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 129 WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC 188
WSSG + V++D +++LWS S Q+ + G Y+S AW T
Sbjct: 192 WSSG-NVLAVALDN-SVYLWSAS-SGDILQLLQMEQPG--EYISSVAWIKEGNYLAVGTS 246
Query: 189 ESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL 248
+ VQ WD++ + ++ +H V + ++L + + IH D+R+ + + L
Sbjct: 247 SAEVQLWDVQQQKRLRNMT-SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL 305
Query: 249 PGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
GH+ + P DG + S G D+ VN+W
Sbjct: 306 SGHSQEVCGLRWAP--DGRHLASGGNDNLVNVW 336
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 133 (51.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 51/233 (21%), Positives = 99/233 (42%)
Query: 121 GKINCVLWWSSGRHDKLVSIDEEN---IFLWSLDCSNKNAQVQSKQSSGMLH----YLSG 173
GK V+ WS H + D ++ I + + ++KN + + G+ H +
Sbjct: 239 GKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKN-ESPTVGPRGVYHGHEDTVED 297
Query: 174 GAWDPHDVNAVAATCESS-VQFWDLRS-MGKTNSIEHAH---VRNVDYDTKKKHLLVTAA 228
A+ P + + S + WD R+ +E AH + VD++ +L++T +
Sbjct: 298 VAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGS 357
Query: 229 DESGIHLWDLRMLKA-----PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVS 283
++ + L+D R L A PI + GH V +P+ S+ D +N+W
Sbjct: 358 ADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW--- 414
Query: 284 TSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
++D + +S + + L ++ + D V W++ +PW S+S D
Sbjct: 415 --DYDRVSKKS--DRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDD 463
>RGD|620477 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10116 "Rattus
norvegicus" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005680 "anaphase-promoting
complex" evidence=IEA;ISO;ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA;ISO] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=IEA;ISO;ISS] [GO:0040020 "regulation
of meiosis" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050773 "regulation of dendrite development"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity"
evidence=IEA;ISO;ISS] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA;ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 RGD:620477
GO:GO:0005813 GO:GO:0048471 GO:GO:0043234 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0005680 GO:GO:0050773 GO:GO:0000922 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363
CTD:991 HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
EMBL:U05341 EMBL:AF052695 EMBL:BC085691 IPI:IPI00382084 PIR:B56021
RefSeq:NP_741990.1 UniGene:Rn.9262 ProteinModelPortal:Q62623
IntAct:Q62623 STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623
GeneID:64515 KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623
NextBio:613310 ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/203 (24%), Positives = 93/203 (45%)
Query: 80 IFSTVFSTGESYGAAIWQIPELYGQ-LNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138
++S + G S A + IP L + L++P++ D ++ ++ WSSG + V
Sbjct: 151 LYSQKATPGSSRKACRY-IPSLPDRILDAPEIRN----DYYLNLVD----WSSG-NVLAV 200
Query: 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLR 198
++D +++LW+ S Q+ + G Y+S AW T + VQ WD++
Sbjct: 201 ALDN-SVYLWNAG-SGDILQLLQMEQPG--DYISSVAWIKEGNYLAVGTSNAEVQLWDVQ 256
Query: 199 SMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAV 258
+ ++ +H V + ++L + + IH D+R+ + + L GH+ +
Sbjct: 257 QQKRLRNMT-SHSARVSSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGL 315
Query: 259 CCNPEYDG-FILSAGTDSTVNLW 280
P DG + S G D+ VN+W
Sbjct: 316 RWAP--DGRHLASGGNDNIVNVW 336
>UNIPROTKB|Q62623 [details] [associations]
symbol:Cdc20 "Cell division cycle protein 20 homolog"
species:10116 "Rattus norvegicus" [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 RGD:620477 GO:GO:0005813 GO:GO:0048471
GO:GO:0043234 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
eggNOG:COG2319 GO:GO:0016567 GO:GO:0005680 GO:GO:0050773
GO:GO:0000922 GO:GO:0031145 GO:GO:0090129 GO:GO:0031915
GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OrthoDB:EOG4CC414 EMBL:U05341 EMBL:AF052695
EMBL:BC085691 IPI:IPI00382084 PIR:B56021 RefSeq:NP_741990.1
UniGene:Rn.9262 ProteinModelPortal:Q62623 IntAct:Q62623
STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623 GeneID:64515
KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623 NextBio:613310
ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/203 (24%), Positives = 93/203 (45%)
Query: 80 IFSTVFSTGESYGAAIWQIPELYGQ-LNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138
++S + G S A + IP L + L++P++ D ++ ++ WSSG + V
Sbjct: 151 LYSQKATPGSSRKACRY-IPSLPDRILDAPEIRN----DYYLNLVD----WSSG-NVLAV 200
Query: 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLR 198
++D +++LW+ S Q+ + G Y+S AW T + VQ WD++
Sbjct: 201 ALDN-SVYLWNAG-SGDILQLLQMEQPG--DYISSVAWIKEGNYLAVGTSNAEVQLWDVQ 256
Query: 199 SMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAV 258
+ ++ +H V + ++L + + IH D+R+ + + L GH+ +
Sbjct: 257 QQKRLRNMT-SHSARVSSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGL 315
Query: 259 CCNPEYDG-FILSAGTDSTVNLW 280
P DG + S G D+ VN+W
Sbjct: 316 RWAP--DGRHLASGGNDNIVNVW 336
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/144 (27%), Positives = 69/144 (47%)
Query: 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG 201
+++I LW L +K+ V ++ +G H++ A++ + + ++ WDL + G
Sbjct: 37 DKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAT-G 95
Query: 202 KTNS--IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPGHTHWTWA 257
+T + H V +V + T + + V+A+ + I LW+ L K I E GH W
Sbjct: 96 ETTRRFVGHTKDVLSVAFSTDNRQI-VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSC 154
Query: 258 VCCNPE-YDGFILSAGTDSTVNLW 280
V +P I+SA D TV +W
Sbjct: 155 VRFSPNTLVPTIVSASWDKTVKVW 178
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/242 (24%), Positives = 110/242 (45%)
Query: 52 GGTELICEGLFSHPNEIWDLSSCPFDQRIFSTV------FSTGESYGAAIWQIPELYGQL 105
GG L+ G +WD++S I + S Y I +
Sbjct: 287 GGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKP 346
Query: 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLV--SIDEENIFLWS-LDCSNKNAQVQSK 162
++P+ + AL+ + KI C +G ++++ + D+ +FLW+ L + A++
Sbjct: 347 STPEEAQKKALENYE-KI-CK---KNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGH 401
Query: 163 QSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYD---TK 219
Q +++++ A+ P V+A+ ++S++ WD R GK S HV +V Y +
Sbjct: 402 QK--LVNHV---AFSPDGRYIVSASFDNSIKLWDGRD-GKFISTFRGHVASV-YQVAWSS 454
Query: 220 KKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGF-ILSAGTDSTVN 278
LLV+ + ++ + +WD+R K + +LPGH + V + DG + S G D V
Sbjct: 455 DCRLLVSCSKDTTLKVWDVRTRKLSV-DLPGHKDEVYTV--DWSVDGKRVCSGGKDKMVR 511
Query: 279 LW 280
LW
Sbjct: 512 LW 513
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 117 (46.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 42/174 (24%), Positives = 79/174 (45%)
Query: 116 LDAHVGKINCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGG 174
L+ H G + L S+G+ + L+S + + W L ++ V + G H +
Sbjct: 13 LEGHNGWVTS-LATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 175 AWDPHDVNAVAATCESSVQFWDLRSMGKTNS--IEH-AHVRNVDYDTKKKHLLVTAADES 231
A++A+ + +++ WD+ + G+T + H + V +VD D KK ++++ + +
Sbjct: 72 TLTADGAYALSASWDKTLRLWDVAT-GETYQRFVGHKSDVMSVDID-KKASMIISGSRDK 129
Query: 232 GIHLWDLRMLKAPIQELPGHTHWTWAVCCNP----EYDGF-ILSAGTDSTVNLW 280
I +W ++ + L GH W V P + D I+SAG D V W
Sbjct: 130 TIKVWTIK--GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAW 181
Score = 51 (23.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 265 DGFILSAG-TDSTVNLWLVSTSN 286
DG L AG TD+ + +W V T+N
Sbjct: 297 DGQTLFAGYTDNVIRVWQVMTAN 319
Score = 43 (20.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 314 EDSVYGLAWSSREPWIFAS-------LSYDGRVVVESVKP 346
+D V+ LA+S W+ A+ S D + +V+ ++P
Sbjct: 237 QDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRP 276
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/117 (24%), Positives = 55/117 (47%)
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241
A+ A+ + +V+ WD + + SIEH V+ D+ + VT E + ++DL
Sbjct: 71 ALTASADYTVKLWDTLNGSEILSIEHQSIVKTADFSNNNSRV-VTGGSEKILRIFDLERP 129
Query: 242 KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVES 298
P+ ++ GHT+ + D +LS G D + +W + + L ++S + S
Sbjct: 130 NDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLRSGTQVSLCAKSSITS 186
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 130 (50.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/129 (22%), Positives = 58/129 (44%)
Query: 175 AWDPHDVNAV-AATCESSVQFWDLRSMGKTNSIEHA----HVRNVDYDTKKKHLLVTAAD 229
AW P ++ + + +++++ WD+R + I + +R+V ++ + + A D
Sbjct: 123 AWHPEKLDCILTGSQDNTLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFD 182
Query: 230 ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDE 289
I LWD+R ++++ H + +PE I S G D + +W SN
Sbjct: 183 NGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVW--DFSNGKS 240
Query: 290 LPSESLVES 298
L + S + S
Sbjct: 241 LNNVSTISS 249
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 307 LNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVV----ESVKPF 347
L S++D+ D GL W S P S S D +++ +S KP+
Sbjct: 286 LFSFTDHRDVPTGLIWKS--PSSLISCSKDSHLLLNEFQDSYKPY 328
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/177 (25%), Positives = 79/177 (44%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E +A ++ H ++ V+W SGR D + LW L+ AQ + G H
Sbjct: 313 EPVADIEGHSMRVARVMWHPSGRFLGTTCYDH-SWRLWDLE-----AQEEILHQEG--H- 363
Query: 171 LSGGAWDP--HDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKHL 223
S G +D H ++A T ++ + WDLR+ G+ H++ + ++ H+
Sbjct: 364 -SKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRT-GRCIMFLEGHLKEIYGLNFSPNGYHV 421
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
T + ++ +WDLR K I +P H + V P + F+L+ D+T +W
Sbjct: 422 -ATGSGDNTCKVWDLRQRKC-IYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW 476
>ASPGD|ASPL0000062179 [details] [associations]
symbol:AN0814 species:162425 "Emericella nidulans"
[GO:0033314 "mitotic DNA replication checkpoint" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IEA] [GO:0010997 "anaphase-promoting complex
binding" evidence=IEA] [GO:0033597 "mitotic checkpoint complex"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 EMBL:AACD01000013
KO:K03363 HOGENOM:HOG000195514 OrthoDB:EOG4KD9V8 RefSeq:XP_658418.1
ProteinModelPortal:Q5BF66 STRING:Q5BF66
EnsemblFungi:CADANIAT00001846 GeneID:2876591 KEGG:ani:AN0814.2
OMA:QVAIGLE Uniprot:Q5BF66
Length = 618
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 44/159 (27%), Positives = 68/159 (42%)
Query: 126 VLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAV 184
+L WSSG V+I E N+++WS D + + +++ + Y+S W
Sbjct: 309 LLDWSSGNQ---VAIGLERNVYVWSADSGSVSCLLETSPDT----YISSVKWSGDGAYVG 361
Query: 185 AATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP 244
VQ WD+ K S+ H V KH L T A + D+R+ +
Sbjct: 362 VGLGTGEVQIWDVEEGTKLRSM-FGHESRVGVMGWSKHTLSTGARSGLVFNHDVRIAQHK 420
Query: 245 IQELPGHTHWTWAVCCNPEY--DGFILSAG-TDSTVNLW 280
+ EL HT + C E+ DG L+ G D+ VN+W
Sbjct: 421 VAELVSHT----SEVCGLEWRSDGAQLATGGNDNLVNIW 455
>FB|FBgn0034908 [details] [associations]
symbol:CG5543 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GeneTree:ENSGT00390000015433 OMA:YWIAPAY EMBL:AY058624
EMBL:AY113366 RefSeq:NP_611832.1 UniGene:Dm.4144
ProteinModelPortal:Q9W1J3 SMR:Q9W1J3 PaxDb:Q9W1J3 PRIDE:Q9W1J3
EnsemblMetazoa:FBtr0072124 GeneID:37768 KEGG:dme:Dmel_CG5543
UCSC:CG5543-RA FlyBase:FBgn0034908 InParanoid:Q9W1J3
OrthoDB:EOG4F4QS5 PhylomeDB:Q9W1J3 GenomeRNAi:37768 NextBio:805315
Bgee:Q9W1J3 Uniprot:Q9W1J3
Length = 655
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP 178
HV ++ W R L + + + +W S + QV ++ G L +
Sbjct: 282 HVAQLTSGCWHPFNREQFLTAALDGTLRIWQGLKSKEQLQVIKTRAQGGLRTNAASCNFN 341
Query: 179 HDVNAVAATC-ESSVQFWDLRSM--GKTNSIEHAH-----VRNVDYDTKKKHLLVTAADE 230
D +AA C + S+Q WD R M T+ + AH + ++ + + L + DE
Sbjct: 342 RDATLIAAGCVDGSIQTWDTRKMFVNTTHCVRDAHQKGSEITSIVFSYMGQQLATRSNDE 401
Query: 231 SGIHLWDLRMLKAPIQELPG-HTHWTWAVCCNPEYDGFILSAGT----DSTVNLWLVSTS 285
+ + LWDLR K P+ + + CC D +++ + + NL+ ST
Sbjct: 402 T-MKLWDLRQFKQPLHTWTNLFSRYDTTDCCFSPDDRLLVTGESLPKGQAEANLYFYSTK 460
Query: 286 NHDEL 290
+++E+
Sbjct: 461 SYEEV 465
>UNIPROTKB|F1MRW5 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005680 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 EMBL:DAAA02009047 IPI:IPI00715664
UniGene:Bt.639 ProteinModelPortal:F1MRW5 Ensembl:ENSBTAT00000012945
Uniprot:F1MRW5
Length = 499
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/153 (25%), Positives = 69/153 (45%)
Query: 129 WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC 188
WSSG + V++D +++LWS + +Q +Q Y+S AW T
Sbjct: 192 WSSG-NVLAVALDN-SVYLWSASTGDILQLLQMEQPGD---YISSVAWIKEGNYLAVGTS 246
Query: 189 ESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL 248
+ VQ WD++ + ++ +H V ++L + + IH D+R+ + + L
Sbjct: 247 SAEVQLWDVQQQKRLRNMT-SHSARVGSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATL 305
Query: 249 PGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
GH+ + P DG + S G D+ VN+W
Sbjct: 306 SGHSQEVCGLRWAP--DGRHLASGGNDNLVNVW 336
>UNIPROTKB|Q5H7C0 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9823 "Sus scrofa" [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0090129 "positive regulation
of synapse maturation" evidence=ISS] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISS] [GO:0005680
"anaphase-promoting complex" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0005815
GO:GO:0005680 GO:GO:0000922 GO:GO:0031145 GO:GO:0090129
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OMA:RTPGKSN
OrthoDB:EOG4CC414 GeneTree:ENSGT00580000081599 EMBL:AB192873
RefSeq:NP_001116566.1 UniGene:Ssc.17001 ProteinModelPortal:Q5H7C0
STRING:Q5H7C0 Ensembl:ENSSSCT00000004368 GeneID:397379
KEGG:ssc:397379 Uniprot:Q5H7C0
Length = 499
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/153 (26%), Positives = 69/153 (45%)
Query: 129 WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC 188
WSSG + V++D +++LWS S Q+ + G Y+S AW T
Sbjct: 192 WSSG-NVLAVALDN-SVYLWSAS-SGDILQLLQMEQPG--DYVSSVAWIKEGNYLAVGTS 246
Query: 189 ESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL 248
+ VQ WD++ + ++ +H V ++L + + IH D+R+ + + L
Sbjct: 247 SAEVQLWDVQQQKRLRNMT-SHSARVGSLCWNSYILSSGSRSGHIHHHDVRVAEHHVATL 305
Query: 249 PGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
GH+ + P DG + S G D+ VN+W
Sbjct: 306 SGHSQEVCGLRWAP--DGRHLASGGNDNLVNVW 336
>MGI|MGI:1859866 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0040020 "regulation of meiosis" evidence=IGI]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050773
"regulation of dendrite development" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISO] [GO:0090129
"positive regulation of synapse maturation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1859866 GO:GO:0005813 GO:GO:0048471
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0050773 GO:GO:0000922
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0040020
GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OMA:RTPGKSN OrthoDB:EOG4CC414 EMBL:AB045313
EMBL:AF312208 EMBL:AK075998 EMBL:AK076030 EMBL:AK083459
EMBL:AK168650 EMBL:BC003215 IPI:IPI00320406 RefSeq:NP_075712.2
UniGene:Mm.289747 ProteinModelPortal:Q9JJ66 SMR:Q9JJ66
IntAct:Q9JJ66 MINT:MINT-2834618 STRING:Q9JJ66 PhosphoSite:Q9JJ66
PRIDE:Q9JJ66 DNASU:107995 Ensembl:ENSMUST00000006565 GeneID:107995
KEGG:mmu:107995 GeneTree:ENSGT00580000081599 InParanoid:Q9JJ66
NextBio:359849 Bgee:Q9JJ66 CleanEx:MM_CDC20 Genevestigator:Q9JJ66
GermOnline:ENSMUSG00000006398 Uniprot:Q9JJ66
Length = 499
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/153 (25%), Positives = 70/153 (45%)
Query: 129 WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC 188
WSSG + V++D +++LW+ S Q+ + G Y+S AW T
Sbjct: 192 WSSG-NVLAVALDN-SVYLWNAG-SGDILQLLQMEQPG--DYISSVAWIKEGNYLAVGTS 246
Query: 189 ESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL 248
+ VQ WD++ + ++ +H V + ++L + + IH D+R+ + + L
Sbjct: 247 NAEVQLWDVQQQKRLRNMT-SHSARVSSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL 305
Query: 249 PGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
GH+ + P DG + S G D+ VN+W
Sbjct: 306 SGHSQEVCGLRWAP--DGRHLASGGNDNIVNVW 336
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 129 (50.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 45/152 (29%), Positives = 77/152 (50%)
Query: 135 DKLVSI-DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA-ATCESSV 192
++LVS D+ + LW K+ + +K G ++ ++ P D +A A+ +SSV
Sbjct: 359 ERLVSASDDLQLILWD---PQKSTKPITKMH-GHQKVVNHASFSP-DGRCIATASFDSSV 413
Query: 193 QFWDLRSMGKTNSIEHAHVRNVDYD---TKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249
+ WD ++ GK + HV V Y + LLV+++ ++ + +WD+R K +LP
Sbjct: 414 RLWDGKT-GKFLATLRGHVAAV-YQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKF-DLP 470
Query: 250 GHTHWTWAVCCNPEYDGF-ILSAGTDSTVNLW 280
GH +AV +P DG + S G D V +W
Sbjct: 471 GHEDQVFAVDWSP--DGQRVASGGADKAVRIW 500
Score = 41 (19.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 113 IAALDAHVGKINCVLW 128
IA + H ++CV W
Sbjct: 170 IATMKGHTNWVSCVAW 185
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 53/202 (26%), Positives = 95/202 (47%)
Query: 114 AALDAHVGKINCVLWWSSGRHDKLVSIDEE-NIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172
A L HV I + S RH L S E+ ++ W L+ SN +A Q + G L +
Sbjct: 122 AVLTGHVLGIRSLC--ISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVY 179
Query: 173 GGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSI-EHAH-VRNVDYDTKKKHLLVTAAD 229
P DV + + V+ WD+RS + ++ H + + +++ D ++ ++ D
Sbjct: 180 SIGLHPELDV-LFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMD 238
Query: 230 ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNH-D 288
+ I LWDLR K + + H+ ++ +P+ F+ S ++ + WL+ +
Sbjct: 239 GT-IRLWDLRKSKTELL-ITNHSKSIRSMKSHPKEATFV-SGDSNGEIKQWLLPKGELLN 295
Query: 289 ELPSESLVESPNQRANS-LLNS 309
E + L SPNQR NS ++N+
Sbjct: 296 EFGTSQL--SPNQRDNSRIINT 315
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 53/202 (26%), Positives = 95/202 (47%)
Query: 114 AALDAHVGKINCVLWWSSGRHDKLVSIDEE-NIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172
A L HV I + S RH L S E+ ++ W L+ SN +A Q + G L +
Sbjct: 122 AVLTGHVLGIRSLC--ISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVY 179
Query: 173 GGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSI-EHAH-VRNVDYDTKKKHLLVTAAD 229
P DV + + V+ WD+RS + ++ H + + +++ D ++ ++ D
Sbjct: 180 SIGLHPELDV-LFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMD 238
Query: 230 ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNH-D 288
+ I LWDLR K + + H+ ++ +P+ F+ S ++ + WL+ +
Sbjct: 239 GT-IRLWDLRKSKTELL-ITNHSKSIRSMKSHPKEATFV-SGDSNGEIKQWLLPKGELLN 295
Query: 289 ELPSESLVESPNQRANS-LLNS 309
E + L SPNQR NS ++N+
Sbjct: 296 EFGTSQL--SPNQRDNSRIINT 315
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 38/152 (25%), Positives = 70/152 (46%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S +++I +W L N + + G H++S A++ + +++
Sbjct: 29 DMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLR 88
Query: 194 FWDLRSMGKTNS--IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELP 249
WDL + G T + H V +V + + ++ + D++ I LW+ L + K IQ+
Sbjct: 89 LWDLTT-GLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKT-IKLWNTLGVCKYTIQD-E 145
Query: 250 GHTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
GHT W V +P I+S G D V +W
Sbjct: 146 GHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 177
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 49/175 (28%), Positives = 84/175 (48%)
Query: 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172
+ L H I+ V W + + S + I +W L S +++ +S L Y
Sbjct: 255 VLTLAGHRECISGVQWIDD--NTLVTSSWDHTIKIWDLALSGIKSEICGHKSFFDLSY-- 310
Query: 173 GGAWDPHDVNA--VAATCESSVQFWDLRS-MG---KTNSIEHAH-VRNVDYDTKKKHLLV 225
H +N +AA+ + +++ +D +S G K + H V++V + T ++L V
Sbjct: 311 -----SH-LNGLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLFV 364
Query: 226 TAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
+ A ++ + LWD R KAPI EL GH A C+ FILS G+D++V ++
Sbjct: 365 SGAYDNHVKLWDYRSPKAPIFELIGHEDKVLA--CDWSNPKFILSGGSDNSVRVF 417
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 131 (51.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 43 EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY 102
++ L L+SG + E L +H +W ++ P DQR F T G W EL
Sbjct: 472 KLQLYDLASG---TLMETLNAHDGAVWSIALSP-DQRGFVT---GGADKCVKFWDF-ELV 523
Query: 103 GQLNSPQLERIAALDAHVGKIN-CVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS 161
+S Q +R++ + +++ VL + KL+++ LDC+ K +
Sbjct: 524 KDESSIQ-KRLSMKQVRILQLDEDVLCVRYSPNQKLLAVS-------LLDCTVKVFYTDT 575
Query: 162 KQSSGML--HYLSGGAWDPHDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNVDY- 216
+ L H L D A+ AT + +V+ W L G + AH +V Y
Sbjct: 576 LKFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGL-DFGDCHRSLFAHDDSVMYL 634
Query: 217 -DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275
K HL TA ++ I WD + IQ L GH W + +P D +++SA D
Sbjct: 635 QFVAKSHLFFTAGKDNKIKQWDADKFEH-IQTLEGHHQEVWCLALSPNGD-YVVSASHDK 692
Query: 276 TVNLW 280
++ LW
Sbjct: 693 SLRLW 697
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 47/218 (21%), Positives = 93/218 (42%)
Query: 129 WSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187
WS ++VS D ++NI +W ++ + S + W P + V A+
Sbjct: 233 WSPKVPGRMVSGDCKKNIHVWEPQ-EGGTWKIDQRPFSSHSKSVEDLQWSPTEAT-VFAS 290
Query: 188 C--ESSVQFWDLR----SMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRML 241
C + S++ WD+R SM N + V + ++ + +L + D+ + +WDLR
Sbjct: 291 CSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNRTEPFIL-SGGDDGLLKVWDLRQF 349
Query: 242 KA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESP 299
++ P+ H+ +V +P ++G D ++ W +S + D + ++ E
Sbjct: 350 QSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVISQWDLSVESCD-MGGQA--EDV 406
Query: 300 NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDG 337
Q LL + ++ V L W + P + S + G
Sbjct: 407 KQLPPQLLFLHQGQKE-VKELHWHPQIPGVLISTALSG 443
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 33/103 (32%), Positives = 57/103 (55%)
Query: 184 VAATCESSVQFWDLRSMGKTNSIE-HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241
V+A+ +++++ WD + S++ H V++V +D + K L +AD S I LWD +
Sbjct: 124 VSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLS-IKLWDFQQS 182
Query: 242 KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284
I+ + GH H +V P D ++LSA D T+ +W V+T
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGD-YVLSASRDRTIKMWEVAT 224
>TAIR|locus:2127263 [details] [associations]
symbol:FZR2 "AT4G22910" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0016049 "cell growth" evidence=IMP] [GO:0042023 "DNA
endoreduplication" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007276 "gamete generation" evidence=RCA]
[GO:0032875 "regulation of DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051302 "regulation of cell division"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016049 eggNOG:COG2319 GO:GO:0016567
EMBL:AL031018 EMBL:AL161558 GO:GO:0010091 GO:GO:0042023
HOGENOM:HOG000195514 KO:K03364 ProtClustDB:CLSN2918069
EMBL:AY099585 EMBL:AY128834 IPI:IPI00520561 PIR:T05122
RefSeq:NP_194022.3 UniGene:At.2372 ProteinModelPortal:Q8L3Z8
SMR:Q8L3Z8 IntAct:Q8L3Z8 STRING:Q8L3Z8 EnsemblPlants:AT4G22910.1
GeneID:828390 KEGG:ath:AT4G22910 GeneFarm:2841 TAIR:At4g22910
InParanoid:Q8L3Z8 OMA:DASRCKR PhylomeDB:Q8L3Z8
Genevestigator:Q8L3Z8 Uniprot:Q8L3Z8
Length = 483
Score = 127 (49.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 64/270 (23%), Positives = 112/270 (41%)
Query: 29 TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG 88
+S +T L E+ V + + GT L G + +IWD S C +R T+
Sbjct: 205 SSKVTKLCDLGAEDSVCSVGWALRGTHLAV-GTSTGKVQIWDASRC---KRT-RTMEGHR 259
Query: 89 ESYGAAIWQIPELY-GQLNSPQLER-IAALDAHVGKIN------CVLWWSSGRHDKLVSI 140
GA W L G + L+R I + HV K+ C L WS +
Sbjct: 260 LRVGALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGG 319
Query: 141 DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDL 197
++ +F+W+ S + S+ ++ + AW PH +A+ T + ++FW+
Sbjct: 320 NDNRLFVWNQH-STQPVLKYSEHTAAV----KAIAWSPHVHGLLASGGGTADRCIRFWNT 374
Query: 198 RSMGKTNSIEH-AHVRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWT 255
+ +SI+ + V N+ + L+ T ++ I +W + + I L GHT+
Sbjct: 375 TTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTM-SKIATLTGHTYRV 433
Query: 256 WAVCCNPEYDGFILSAGTDSTVNLWLVSTS 285
+ +P+ + AG D T+ W V S
Sbjct: 434 LYLAVSPDGQTIVTGAG-DETLRFWNVFPS 462
>ASPGD|ASPL0000002981 [details] [associations]
symbol:AN6257 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006998 "nuclear
envelope organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 EMBL:AACD01000107 EMBL:BN001301 eggNOG:NOG248389
KO:K14005 InterPro:IPR009917 Pfam:PF07304 RefSeq:XP_663861.1
STRING:Q5AZM3 GeneID:2871160 KEGG:ani:AN6257.2 HOGENOM:HOG000048339
OMA:NQPPPMM OrthoDB:EOG4RR9RS Uniprot:Q5AZM3
Length = 1282
Score = 115 (45.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 52/212 (24%), Positives = 89/212 (41%)
Query: 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLW 148
ES +W +L + L + + H G I + + + RH L++ L+
Sbjct: 92 ESGSLGLWDADKLLSGASDAVLSKSSK---HSGAIKALQF--NPRHSSLLATGGAKGELY 146
Query: 149 SLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA-VAATCESSVQFWDLRSMGKT---N 204
D ++ + S+ + W+ + V + V WD+++ ++ N
Sbjct: 147 ISDLNDLENPYRLGSSTARADDIECLDWNKKVAHILVTGSSAGFVTVWDVKTRKESLTLN 206
Query: 205 SIEHAHVRNVDYDTKKKHLLVTAAD-ESG--IHLWDLRMLKAPIQELPGHTHWTWAVC-C 260
++ V V +D K LVTA ES I+LWDLR AP + L GH ++ C
Sbjct: 207 NMGRKAVSAVAWDPTKPTKLVTATPHESDPIINLWDLRNSHAPERTLRGHEAGVLSLSWC 266
Query: 261 NPEYDGFILSAGTDSTVNLWLVSTS-NHDELP 291
N + D +LS+G D+ W T ++ E P
Sbjct: 267 NQDPD-LLLSSGKDNRTICWNPQTGISYGEFP 297
Score = 64 (27.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 322 WSSREPWIFASLSYDGRVVVESVK 345
W+ R P FA+ S+DGR+ +++++
Sbjct: 308 WNPRNPNFFATASFDGRISIQTIQ 331
>ZFIN|ZDB-GENE-040426-1110 [details] [associations]
symbol:strap "serine/threonine kinase receptor
associated protein" species:7955 "Danio rerio" [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1110 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016301 HSSP:P16649
GeneTree:ENSGT00630000089849 EMBL:BX649476 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG
OrthoDB:EOG4CRM0M EMBL:BC049525 EMBL:BC065428 IPI:IPI00506790
RefSeq:NP_956598.1 UniGene:Dr.12320 STRING:Q7ZW92 DNASU:393274
Ensembl:ENSDART00000013224 Ensembl:ENSDART00000124627 GeneID:393274
KEGG:dre:393274 InParanoid:Q7ZW92 NextBio:20814331 Uniprot:Q7ZW92
Length = 329
Score = 124 (48.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 173 GGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADES 231
G + A A + + + WD + + ++ H H V++V++ T+ + L+T ++
Sbjct: 64 GATLNTEATKAATAAADFTAKVWDAVTGDEVLTLAHKHIVKSVNF-TQDSNYLLTGGNDK 122
Query: 232 GIHLWDLRMLKAPIQELPGHTHWTW-AVCCNPEYDGFILSAGTDSTVNLWLVSTS 285
+ ++DL +A QE+ GHT A+ CN + ILSA D T+ LW +T+
Sbjct: 123 VLRIYDLSKPEAEPQEIAGHTSAIKKALWCNNDQQ--ILSAADDKTIRLWDKNTN 175
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 127 (49.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E +A ++ H ++ V+W SGR D + LW L+ AQ + G H
Sbjct: 314 EPVADIEGHTVRVARVMWHPSGRFLGTTCYDR-SWRLWDLE-----AQEEILHQEG--H- 364
Query: 171 LSGGAWDP--HDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKHL 223
S G +D H ++A T ++ + WDLR+ G+ H++ + ++ H+
Sbjct: 365 -SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT-GRCIMFLEGHLKEIYGINFSPNGYHI 422
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
T + ++ +WDLR + + +P H + V P + F+L+ D+T +W
Sbjct: 423 -ATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 477
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 127 (49.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E +A ++ H ++ V+W SGR D + LW L+ AQ + G H
Sbjct: 329 EPVADIEGHTVRVARVMWHPSGRFLGTTCYDR-SWRLWDLE-----AQEEILHQEG--H- 379
Query: 171 LSGGAWDP--HDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKHL 223
S G +D H ++A T ++ + WDLR+ G+ H++ + ++ H+
Sbjct: 380 -SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT-GRCIMFLEGHLKEIYGINFSPNGYHI 437
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
T + ++ +WDLR + + +P H + V P + F+L+ D+T +W
Sbjct: 438 -ATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 492
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 127 (49.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E +A ++ H ++ V+W SGR D + LW L+ AQ + G H
Sbjct: 331 EPVADIEGHTVRVARVMWHPSGRFLGTTCYDR-SWRLWDLE-----AQEEILHQEG--H- 381
Query: 171 LSGGAWDP--HDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKHL 223
S G +D H ++A T ++ + WDLR+ G+ H++ + ++ H+
Sbjct: 382 -SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT-GRCIMFLEGHLKEIYGINFSPNGYHI 439
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
T + ++ +WDLR + + +P H + V P + F+L+ D+T +W
Sbjct: 440 -ATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 494
>TAIR|locus:2137030 [details] [associations]
symbol:CCS52A2 "AT4G11920" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0032877 "positive
regulation of DNA endoreduplication" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007276 "gamete generation" evidence=RCA] [GO:0032875
"regulation of DNA endoreduplication" evidence=RCA] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051302
"regulation of cell division" evidence=RCA] [GO:0051510 "regulation
of unidimensional cell growth" evidence=RCA] [GO:0051788 "response
to misfolded protein" evidence=RCA] [GO:0008361 "regulation of cell
size" evidence=IMP] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008361 GO:GO:0016567
GO:GO:0032877 EMBL:AL078606 GO:GO:0010492 EMBL:AL161533
HOGENOM:HOG000195514 KO:K03364 EMBL:AY063875 EMBL:AY091235
IPI:IPI00542441 PIR:T09351 RefSeq:NP_192929.2 UniGene:At.27160
ProteinModelPortal:Q8VZS9 SMR:Q8VZS9 IntAct:Q8VZS9 STRING:Q8VZS9
PaxDb:Q8VZS9 EnsemblPlants:AT4G11920.1 GeneID:826799
KEGG:ath:AT4G11920 GeneFarm:2925 TAIR:At4g11920 InParanoid:Q8VZS9
OMA:SRESEIG PhylomeDB:Q8VZS9 ProtClustDB:CLSN2918069
Genevestigator:Q8VZS9 Uniprot:Q8VZS9
Length = 475
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 54/246 (21%), Positives = 100/246 (40%)
Query: 53 GTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY-GQLNSPQLE 111
GT L G S +IWD+ C + T+ GA W L G + L+
Sbjct: 221 GTHLAI-GTSSGTVQIWDVLRC----KNIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQ 275
Query: 112 R-IAALDAHVGKIN------CVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS 164
R I + HV K+ C L WSS + ++ +F+W+ + + +
Sbjct: 276 RDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAA 335
Query: 165 SGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGKTNSIE-HAHVRNVDYDTKK 220
+ + AW PH +A+ T + ++FW+ + N ++ ++ V N+ +
Sbjct: 336 A-----VKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNV 390
Query: 221 KHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 279
L+ T ++ I +W + + + L GH++ + +P+ + AG D T+
Sbjct: 391 NELVSTHGYSQNQIIVWKYPTM-SKLATLTGHSYRVLYLAVSPDGQTIVTGAG-DETLRF 448
Query: 280 WLVSTS 285
W V S
Sbjct: 449 WNVFPS 454
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 128 (50.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 49/166 (29%), Positives = 75/166 (45%)
Query: 122 KINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180
KI+C+ W SS + L S D E + LW + + ++V + + DP
Sbjct: 435 KISCISW-SSYHKNLLASSDYEGTVILWD-GFTGQRSKVYQEHEKRCWS-VDFNLMDPKL 491
Query: 181 VNAVAATCESSVQFWDLRSMGKTNSIE-HAHVRNVDYD-TKKKHLLVTAADESGIHLWDL 238
+ + + ++ V+ W SIE A+V V + T + HL AD +H +DL
Sbjct: 492 L--ASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHLAFGCADHC-VHYYDL 548
Query: 239 RMLKAPIQELPGHTHW-TWAVCCNPEYDGFILSAGTDSTVNLWLVS 283
R K PI GH ++A N G I+SA TDS + LW V+
Sbjct: 549 RNAKQPIMVFKGHRKAVSYAKFVN---GGEIVSASTDSQLKLWNVN 591
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 135 DKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
++LVS D+ +FLWS +K + +++ + + P +A+ + S++
Sbjct: 342 ERLVSGSDDFTLFLWS-PAEDKKPLARMTGHQALINQV---LFSPDSRIVASASFDKSIK 397
Query: 194 FWDLRSMGKTNSIEHAHVRNVDYD---TKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250
WD R+ GK + HV V Y + LLV+ + +S + +WD++ K +LPG
Sbjct: 398 LWDGRT-GKYLASLRGHVAAV-YQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAT-DLPG 454
Query: 251 HTHWTWAVCCNPEYDGF-ILSAGTDSTVNLW 280
H +AV +P DG + S G D + +W
Sbjct: 455 HADEVYAVDWSP--DGQRVASGGKDKCLRIW 483
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 135 DKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
++LVS D+ +FLWS +K + +++ + + P +A+ + S++
Sbjct: 344 ERLVSGSDDFTLFLWS-PAEDKKPLARMTGHQALINQV---LFSPDSRIVASASFDKSIK 399
Query: 194 FWDLRSMGKTNSIEHAHVRNVDYD---TKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250
WD R+ GK + HV V Y + LLV+ + +S + +WD++ K +LPG
Sbjct: 400 LWDGRT-GKYLASLRGHVAAV-YQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTT-DLPG 456
Query: 251 HTHWTWAVCCNPEYDGF-ILSAGTDSTVNLW 280
H +AV +P DG + S G D + +W
Sbjct: 457 HADEVYAVDWSP--DGQRVASGGKDKCLRIW 485
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 135 DKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA-ATCESSV 192
+ LVS ++N ++LW +N+N V+ + +G + ++ + P DV +A A+ + SV
Sbjct: 346 ESLVSCSDDNTLYLWR---NNQNKCVE--RMTGHQNVVNDVKYSP-DVKLIASASFDKSV 399
Query: 193 QFWDLRSMGKTNSIEHAHVRNVDYD---TKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249
+ W S G+ + HV+ V Y + L+V+ + +S + +W ++ K QELP
Sbjct: 400 RLWRA-SDGQYMATFRGHVQAV-YTVAWSADSRLIVSGSKDSTLKVWSVQTKKLA-QELP 456
Query: 250 GHTHWTWAVCCNPEYDGF-ILSAGTDSTVNLW 280
GH + V P DG + S G D + LW
Sbjct: 457 GHADEVFGVDWAP--DGSRVASGGKDKVIKLW 486
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 42/173 (24%), Positives = 75/173 (43%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E IA ++ H ++ V W SGR D + LW L+ + Q S G+ H
Sbjct: 299 EPIADIEGHSMRVARVTWHPSGRFLGTTCYDH-SWRLWDLEVQEEILH-QEGHSKGV-HD 355
Query: 171 LSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVR---NVDYDTKKKHLLVTA 227
L + P A +S + WDLR+ G+ H++ ++++ H+ T
Sbjct: 356 LH---FHPDGSLAGTGGLDSFARVWDLRT-GRCVMFLEGHIKEIYSINFSPNGFHV-ATG 410
Query: 228 ADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
+ ++ +WDLR + I +P H + +V P ++L+ D+T +W
Sbjct: 411 SGDNACKVWDLRQRRC-IYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW 462
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 126 (49.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E +A ++ H ++ V+W SGR D + LW L+ AQ + G H
Sbjct: 313 EPVADIEGHTVRVARVMWHPSGRFLGTTCYDR-SWRLWDLE-----AQEEILHQEG--H- 363
Query: 171 LSGGAWDP--HDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKHL 223
S G +D H ++A T ++ + WDLR+ G+ H++ + ++ H+
Sbjct: 364 -SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT-GRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
T + ++ +WDLR + + +P H + V P + F+L+ D+T +W
Sbjct: 422 -ATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW 476
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 53/190 (27%), Positives = 84/190 (44%)
Query: 97 QIPELYGQLNSPQLER-IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSL--DCS 153
Q P G+ + LE I L H + + + +G S D E IFLW + DC
Sbjct: 29 QGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDRE-IFLWRVHGDCK 87
Query: 154 NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT--NSIEHAHV 211
N K + LH+ S G+ V+A+ + +V+ WD+ + GK EH+
Sbjct: 88 NFMVLKGHKNAILDLHWTSDGS------QIVSASPDKTVRAWDVET-GKQIKKMAEHSSF 140
Query: 212 RNVDYDTKK-KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILS 270
N T++ L+++ +D+ LWD+R + IQ P T AV + D I +
Sbjct: 141 VNSCCPTRRGPPLIISGSDDGTAKLWDMRQ-RGAIQTFPDKYQIT-AVSFSDAADK-IFT 197
Query: 271 AGTDSTVNLW 280
G D+ V +W
Sbjct: 198 GGVDNDVKVW 207
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 125 (49.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 135 DKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
++LVS D+ +FLWS +K + +++ + + P +A+ + S++
Sbjct: 342 ERLVSGSDDFTLFLWS-PAEDKKPLARMTGHQALINQV---LFSPDSRIIASASFDKSIK 397
Query: 194 FWDLRSMGKTNSIEHAHVRNVDYD---TKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250
WD R+ GK + HV V Y + LLV+ + +S + +WD++ K +LPG
Sbjct: 398 LWDGRT-GKYLASLRGHVAAV-YQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAA-DLPG 454
Query: 251 HTHWTWAVCCNPEYDGF-ILSAGTDSTVNLW 280
H +AV +P DG + S G D + +W
Sbjct: 455 HADEVYAVDWSP--DGQRVASGGKDKCLRIW 483
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 124 (48.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 49/236 (20%), Positives = 98/236 (41%)
Query: 114 AALDAHVGKINCVLWWSSGRHDKLVSIDEENIF-LWSLDCSNKNAQVQSKQSSGMLHY-- 170
A L H + L W+ L + E+ + LW + + + ++K S + Y
Sbjct: 176 AVLKGHTAE-GFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSS-ETKVISPIAKYHR 233
Query: 171 ----LSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNS--IEHAH---VRNVDYDTKK 220
++ + P H+ + + + ++Q D R + + + AH + V +
Sbjct: 234 HTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFN 293
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
+LL TA+ + + LWDLR + L GH + + +P + + S+ TD V +W
Sbjct: 294 DYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIW 353
Query: 281 LVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336
+ ++ P ++ SP LL + + + + +W E W+ SL+ D
Sbjct: 354 DLEKIGEEQTPEDAEDGSPE-----LLFMHGGHTNRISEFSWCPNERWVVGSLADD 404
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 125 (49.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E +A ++ H ++ V+W SGR D + LW L+ AQ + G H
Sbjct: 313 EPVADIEGHTVRVARVMWHPSGRFLGTTCYDR-SWRLWDLE-----AQEEILHQEG--H- 363
Query: 171 LSGGAWDP--HDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKHL 223
S G +D H ++A T ++ + WDLR+ G+ H++ + + H+
Sbjct: 364 -SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT-GRCIMFLEGHLKEIYGISFSPNGYHI 421
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
T + ++ +WDLR + + +P H + V P + F+L+ D+T +W
Sbjct: 422 -ATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW 476
>UNIPROTKB|F1S7T5 [details] [associations]
symbol:NUP43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K14305
CTD:348995 OMA:QWTAAHY GeneTree:ENSGT00390000004803 EMBL:CU571230
RefSeq:XP_001929004.1 UniGene:Ssc.52499 ProteinModelPortal:F1S7T5
Ensembl:ENSSSCT00000004540 GeneID:100154567 KEGG:ssc:100154567
Uniprot:F1S7T5
Length = 380
Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 82/357 (22%), Positives = 141/357 (39%)
Query: 13 KYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRL-------SSGGTE----LICEGL 61
K + R +S T T F TG+ EEN V L + S GG E L+C+
Sbjct: 15 KTRWRPLSSGSLQTAET-FATGSWD-NEENYVSLWSIGDLGNVDSDGGFEGDHQLLCD-- 70
Query: 62 FSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG 121
H ++ DL FDQ STG ++ L+ Q A A G
Sbjct: 71 IRHHGDVMDLQF--FDQERIVAASSTG---CVTVFLHHPNNQTLSVSQQWTTAHYHAGPG 125
Query: 122 KINCVLWWSSG---RHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD 177
+C +G ++V++ E+ I L+ D + + SS LH ++
Sbjct: 126 SPSCSSAPCTGVVCNSPEIVTVGEDGRINLFRADYKEAIKTIDNADSS-TLHAVTF-LRT 183
Query: 178 PH--DVNAVAATCESSVQFWDLRSMGKTNSI------EHAHVRNVDYDTKKKHLLVTAAD 229
P VN++ ++ WD R G S + A + VD ++H++ T
Sbjct: 184 PEILTVNSIG-----QLKIWDFRQQGNEPSQILSLTGDRAPLHCVDRHPNQQHVVATGGQ 238
Query: 230 ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDE 289
+ + +WD+R P+ L H W V +P + + D ++ W ST +
Sbjct: 239 DGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWHWDAST----D 294
Query: 290 LPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346
+P +S + R+++ L+ + +V+ SS W+ + D R+ + S+ P
Sbjct: 295 VPEKSSLFHQGGRSSTFLSHSISNQTNVHQSLISS---WLSTDPARD-RIEITSLLP 347
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 128 (50.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 135 DKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
++LVS D+ +FLWS +K + +++ + + P +A+ + S++
Sbjct: 342 ERLVSGSDDFTLFLWS-PAEDKKPLTRMTGHQALINQV---LFSPDSRIVASASFDKSIK 397
Query: 194 FWDLRSMGKTNSIEHAHVRNVDYD---TKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250
WD R+ GK + HV V Y + LLV+ + +S + +WD++ K + +LPG
Sbjct: 398 LWDGRT-GKYLASLRGHVAAV-YQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAM-DLPG 454
Query: 251 HTHWTWAVCCNPEYDGF-ILSAGTDSTVNLW 280
H +AV +P DG + S G D + +W
Sbjct: 455 HADEVYAVDWSP--DGQRVASGGKDKCLRIW 483
Score = 37 (18.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSS 73
YQ + I V+A T TS L G V + S G + + G WDLS+
Sbjct: 92 YQPQAIFRVRAVTRCTSSLEG-----HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLST 145
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 123 (48.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 47/175 (26%), Positives = 83/175 (47%)
Query: 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY-- 170
+ L H I+ V W + + S + I +W L + +++ +S L Y
Sbjct: 253 LMTLAGHRECISGVQWIDD--NTLVTSSWDHTIKIWDLALNGIKSEISGNKSFFDLSYSK 310
Query: 171 LSGGAWDPHDVNAVAATCESSVQFWDLRS-MG---KTNSIEHAH-VRNVDYDTKKKHLLV 225
L+G + A+ + +++ +D +S G K + H V++V + T ++L V
Sbjct: 311 LNG--------LIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFV 362
Query: 226 TAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
+ A ++ + LWD R KAPI EL GH A C+ FILS G+D++V ++
Sbjct: 363 SGAYDNHVKLWDYRSPKAPIFELIGHEDKVLA--CDWSNPRFILSGGSDNSVRVF 415
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E +A ++ H ++ V W SGR D + LW L+ AQ + G H
Sbjct: 313 EPVADIEGHTVRVARVTWHPSGRFLGTTCYDR-SWRLWDLE-----AQEEILHQEG--H- 363
Query: 171 LSGGAWDP--HDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKHL 223
S G +D H ++A T ++ + WDLR+ G+ H++ + ++ H+
Sbjct: 364 -SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT-GRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
T + ++ +WDLR + + +P H + V P + F+L+ D+T +W
Sbjct: 422 -ATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 476
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 41/186 (22%), Positives = 82/186 (44%)
Query: 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQ 160
+ G P LER H G I + + G S D + LW+L+ + + +
Sbjct: 1 MQGLFRDPALER--HFTGHSGGITQLRFGPDGAQIATSSTDS-TVILWNLNQAARCIRFA 57
Query: 161 SKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS-IEHAH-VRNVDYDT 218
S + ++G AW P +A + +V+ W+ + G + + H+ VR+VD+D+
Sbjct: 58 SHSAP-----VNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDS 112
Query: 219 KKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278
HL++TA+D+ +W + + + +W + +P + +A D +V
Sbjct: 113 TG-HLMLTASDDKSAKIWRVARRQF-VSSFAQQNNWVRSAKFSPN-GKLVATASDDKSVR 169
Query: 279 LWLVST 284
++ V +
Sbjct: 170 IYDVDS 175
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 49/179 (27%), Positives = 79/179 (44%)
Query: 129 WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS-SGMLHYLSGGAWDPHDVN-AVAA 186
WS G +D++++ N + D + Q S +H L A++PH ++
Sbjct: 156 WSHGLYDQIIATAVANGRIVVYDLHRTGLEYCRFQGHSRQVHRL---AFNPHQPAWLLSG 212
Query: 187 TCESSVQFWDLR------------SMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIH 234
+ ++ ++ WDLR S + NS A VR+V + L A D I
Sbjct: 213 SQDAHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDA-VRDVRWSPGDGVLFAVATDSGAIQ 271
Query: 235 LWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLWLVS-TSNHDELP 291
LWD+R +PI + H ++V +P DG I+S GTD V +W S T+ + P
Sbjct: 272 LWDIRKSSSPILRITAHDRPCYSVDWHP--DGKHIVSGGTDRQVKVWEFSITAERRQKP 328
>MGI|MGI:1345963 [details] [associations]
symbol:Coro1b "coronin, actin binding protein 1B"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IBA]
[GO:0030036 "actin cytoskeleton organization" evidence=IBA]
[GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1345963 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629
eggNOG:COG2319 GO:GO:0051015 GeneTree:ENSGT00550000074317
HOGENOM:HOG000166356 HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:57175 KO:K13886
OMA:QGERICR EMBL:AF143956 EMBL:AK008947 EMBL:AK149639
IPI:IPI00124819 RefSeq:NP_035908.1 UniGene:Mm.276859
ProteinModelPortal:Q9WUM3 SMR:Q9WUM3 IntAct:Q9WUM3 STRING:Q9WUM3
PhosphoSite:Q9WUM3 PaxDb:Q9WUM3 PRIDE:Q9WUM3
Ensembl:ENSMUST00000008893 GeneID:23789 KEGG:mmu:23789
InParanoid:Q9WUM3 ChiTaRS:CORO1B NextBio:303387 Bgee:Q9WUM3
CleanEx:MM_CORO1B Genevestigator:Q9WUM3
GermOnline:ENSMUSG00000024835 Uniprot:Q9WUM3
Length = 484
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 48/195 (24%), Positives = 86/195 (44%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H + D+ CP + + + S E +WQIPE L SP E + L+ H ++
Sbjct: 81 HTGPVLDIDWCPHNDEVIA---SGSEDCTVMVWQIPE--NGLTSPLTEPVVVLEGHTKRV 135
Query: 124 NCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182
+ W + R+ L+S +N+ L W++ + + ++ S +++ +S W+ H+ +
Sbjct: 136 GIITWHPTARN-VLLSAGCDNVVLIWNVGTAEELYRLDSLHPD-LIYNVS---WN-HNGS 189
Query: 183 AVAATC-ESSVQFWDLRSMGKTNSIEHAH-----VRNVDY-DTKKKHLLVTAADESGIHL 235
+ C + SV+ D R E AH +R + D K + E + L
Sbjct: 190 LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249
Query: 236 WDLRMLKAP--IQEL 248
WD L+ P +QEL
Sbjct: 250 WDPENLEEPMALQEL 264
>UNIPROTKB|Q9BR76 [details] [associations]
symbol:CORO1B "Coronin-1B" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IBA] [GO:0030036 "actin cytoskeleton
organization" evidence=IBA] [GO:0051015 "actin filament binding"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
EMBL:CH471076 GO:GO:0051015 HOGENOM:HOG000166356 HOVERGEN:HBG059978
OrthoDB:EOG4RNB8C InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:AK315399 EMBL:BC006449 IPI:IPI00007058 RefSeq:NP_001018080.1
RefSeq:NP_065174.1 UniGene:Hs.6191 ProteinModelPortal:Q9BR76
SMR:Q9BR76 IntAct:Q9BR76 MINT:MINT-5005556 STRING:Q9BR76
PhosphoSite:Q9BR76 DMDM:21263481 PaxDb:Q9BR76 PeptideAtlas:Q9BR76
PRIDE:Q9BR76 DNASU:57175 Ensembl:ENST00000341356
Ensembl:ENST00000393893 GeneID:57175 KEGG:hsa:57175 UCSC:uc001olk.1
CTD:57175 GeneCards:GC11M067205 HGNC:HGNC:2253 HPA:CAB017616
MIM:609849 neXtProt:NX_Q9BR76 PharmGKB:PA26769 InParanoid:Q9BR76
KO:K13886 OMA:QGERICR PhylomeDB:Q9BR76 GenomeRNAi:57175
NextBio:63197 ArrayExpress:Q9BR76 Bgee:Q9BR76 CleanEx:HS_CORO1B
Genevestigator:Q9BR76 GermOnline:ENSG00000172725 Uniprot:Q9BR76
Length = 489
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 48/195 (24%), Positives = 86/195 (44%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H + D+ CP + + + S E +WQIPE L SP E + L+ H ++
Sbjct: 81 HTGPVLDIDWCPHNDEVIA---SGSEDCTVMVWQIPE--NGLTSPLTEPVVVLEGHTKRV 135
Query: 124 NCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182
+ W + R+ L+S +N+ L W++ + + ++ S +++ +S W+ H+ +
Sbjct: 136 GIIAWHPTARN-VLLSAGCDNVVLIWNVGTAEELYRLDSLHPD-LIYNVS---WN-HNGS 189
Query: 183 AVAATC-ESSVQFWDLRSMGKTNSIEHAH-----VRNVDY-DTKKKHLLVTAADESGIHL 235
+ C + SV+ D R E AH +R + D K + E + L
Sbjct: 190 LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249
Query: 236 WDLRMLKAP--IQEL 248
WD L+ P +QEL
Sbjct: 250 WDPENLEEPMALQEL 264
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 44/177 (24%), Positives = 80/177 (45%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS-SGM 167
QL L+ H G + + + L ++ + +W+L ++ A K+S G
Sbjct: 4 QLVLRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLT-RDEQAYGYPKRSLEGH 62
Query: 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLV 225
H +S A++A+ + S++ W+L S T + + H + V +V + + ++
Sbjct: 63 SHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVS 122
Query: 226 TAADESGIHLWD-LRMLKAPIQELPGHTHWTWAVCCNPE-YDGFILSAGTDSTVNLW 280
+ D + I LW+ L K I + GHT W V +P + I+SAG D V +W
Sbjct: 123 GSRDRT-IKLWNTLGDCKYTITD-KGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVW 177
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 43/146 (29%), Positives = 69/146 (47%)
Query: 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM- 200
+ I LW L + +S L Y P + + A+ + +++ +D RS
Sbjct: 281 DHTIKLWDLSMGGIKTEFTGNKSFFDLSY------SPLNGMIITASPDKNLRLYDPRSKH 334
Query: 201 G---KTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTW 256
G K + H+ V+ + T ++L V+ A ++ + LWD R KAPI EL GH
Sbjct: 335 GNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDNRVKLWDYRSPKAPIFELIGHEDKVL 394
Query: 257 AVC--CNPEYDGFILSAGTDSTVNLW 280
A C NP+Y ILS G+D+ V ++
Sbjct: 395 A-CDWSNPKY---ILSGGSDNAVRVF 416
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 126 (49.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 135 DKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
++LVS D+ +FLWS +K + +++ + + P +A+ + S++
Sbjct: 343 ERLVSGSDDFTLFLWS-PAEDKKPLARMTGHQALINQV---VFSPDSRVIASASFDKSIK 398
Query: 194 FWDLRSMGKTNSIEHAHVRNVDYD---TKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250
WD R+ GK + HV V Y + LLV+ + +S + +WD++ K +LPG
Sbjct: 399 LWDGRT-GKYLASLRGHVAAV-YQIAWSADSRLLVSGSSDSTLKVWDVKAQKLST-DLPG 455
Query: 251 HTHWTWAVCCNPEYDGF-ILSAGTDSTVNLW 280
H +AV +P DG + S G D + +W
Sbjct: 456 HADEVYAVDWSP--DGQRVASGGKDKCLRIW 484
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSS 73
YQ + I V+A T TS L G V + S G + + G WDLS+
Sbjct: 93 YQPQAIFRVRAVTRCTSSLEG-----HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLST 146
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 135 DKLVS-IDEENIFLWSLDCSN--KNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS 191
++LVS D+ +FLW S K +Q +++ G W +A+ + S
Sbjct: 330 ERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKW------IASASFDKS 383
Query: 192 VQFWDLRSMGKTNSIEHAHVRNVDYDTK---KKHLLVTAADESGIHLWDLRMLKAPIQEL 248
V+ W+ G+ ++ HV V Y LL++ + +S + +W++R K Q+L
Sbjct: 384 VRLWN-GITGQFVTVFRGHVGPV-YQVSWSADSRLLLSGSKDSTLKIWEIRTKKLK-QDL 440
Query: 249 PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
PGH +AV +P+ + ++S G D + LW
Sbjct: 441 PGHADEVFAVDWSPDGEK-VVSGGKDRVLKLW 471
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 179 HDVNAVAATCESSVQFWDLRSMGKTNSIE-HAH-VRNVDYDTKKKHLLVTAADESGIHLW 236
HD +A+ +S+V+ WD + +++E H VR+V + + LL +A+D+S + +W
Sbjct: 348 HDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF-SHDSQLLASASDDSTVKIW 406
Query: 237 DLRMLKAPIQE-LPGHTHWTWAVCCNPEYDGFIL-SAGTDSTVNLWLVSTSN 286
D +Q L GH W +V + +D +L SA DSTV +W T +
Sbjct: 407 DTGT--GSLQHTLEGHRDWVRSVIFS--HDSQLLASASDDSTVKIWDTGTGS 454
>CGD|CAL0004530 [details] [associations]
symbol:CDH1 species:5476 "Candida albicans" [GO:0007096
"regulation of exit from mitosis" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0010997 "anaphase-promoting complex binding"
evidence=IEA] [GO:0097027 "ubiquitin-protein ligase activator
activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0030996 "cell cycle arrest in response to nitrogen starvation"
evidence=IEA] [GO:0010697 "negative regulation of spindle pole body
separation" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:2000600 "positive regulation of cyclin
catabolic process" evidence=IEA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0004530 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0007096
HOGENOM:HOG000195514 KO:K03364 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719530.1 RefSeq:XP_719654.1 ProteinModelPortal:Q5ACY4
STRING:Q5ACY4 GeneID:3638700 GeneID:3638814 KEGG:cal:CaO19.2084
KEGG:cal:CaO19.9631 Uniprot:Q5ACY4
Length = 597
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 67/282 (23%), Positives = 117/282 (41%)
Query: 37 SLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESY--GAA 94
+L +++V L GT L G EIWD + RI TG S +
Sbjct: 329 NLTNKDKVTSLNWIGTGTHLAI-GTSKGLVEIWDAT------RIKCIRTMTGHSLRVSSL 381
Query: 95 IWQIPELY-GQLNSPQLERIAALDAH-VGKIN------CVLWWSSGRHDKLVSI-DEENI 145
W L G + L R ++ H V K + C L W+ +KL S ++ N+
Sbjct: 382 AWNEHILSSGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKWNV-EENKLASGGNDNNL 440
Query: 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGK 202
F+W D N Q + + + AW PH +A+ T + +++ W+ +
Sbjct: 441 FVW--DGLNPKPLHQFTDHTAAVKAI---AWSPHQRGILASGGGTADKTIKTWNTLTGNL 495
Query: 203 TNSIEH-AHVRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWTWAVCC 260
+ + + V N+ + L+ T + I +W ++ I +L GHT+ +
Sbjct: 496 VHDVNTGSQVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQ-IAQLTGHTYRVLYLSL 554
Query: 261 NPEYDGFILSAGTDSTVNLWLVSTSN-HDELPSESLVESPNQ 301
+P+ + + AG D T+ W V N H+E P+ L+ + +Q
Sbjct: 555 SPDGETIVTGAG-DETLRFWNVFEKNRHNESPASVLLGAFSQ 595
>UNIPROTKB|Q5ACY4 [details] [associations]
symbol:CDH1 "Putative uncharacterized protein CDH1"
species:237561 "Candida albicans SC5314" [GO:0007096 "regulation of
exit from mitosis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004530 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0007096 HOGENOM:HOG000195514 KO:K03364 EMBL:AACQ01000031
EMBL:AACQ01000030 RefSeq:XP_719530.1 RefSeq:XP_719654.1
ProteinModelPortal:Q5ACY4 STRING:Q5ACY4 GeneID:3638700
GeneID:3638814 KEGG:cal:CaO19.2084 KEGG:cal:CaO19.9631
Uniprot:Q5ACY4
Length = 597
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 67/282 (23%), Positives = 117/282 (41%)
Query: 37 SLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESY--GAA 94
+L +++V L GT L G EIWD + RI TG S +
Sbjct: 329 NLTNKDKVTSLNWIGTGTHLAI-GTSKGLVEIWDAT------RIKCIRTMTGHSLRVSSL 381
Query: 95 IWQIPELY-GQLNSPQLERIAALDAH-VGKIN------CVLWWSSGRHDKLVSI-DEENI 145
W L G + L R ++ H V K + C L W+ +KL S ++ N+
Sbjct: 382 AWNEHILSSGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKWNV-EENKLASGGNDNNL 440
Query: 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGK 202
F+W D N Q + + + AW PH +A+ T + +++ W+ +
Sbjct: 441 FVW--DGLNPKPLHQFTDHTAAVKAI---AWSPHQRGILASGGGTADKTIKTWNTLTGNL 495
Query: 203 TNSIEH-AHVRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWTWAVCC 260
+ + + V N+ + L+ T + I +W ++ I +L GHT+ +
Sbjct: 496 VHDVNTGSQVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQ-IAQLTGHTYRVLYLSL 554
Query: 261 NPEYDGFILSAGTDSTVNLWLVSTSN-HDELPSESLVESPNQ 301
+P+ + + AG D T+ W V N H+E P+ L+ + +Q
Sbjct: 555 SPDGETIVTGAG-DETLRFWNVFEKNRHNESPASVLLGAFSQ 595
>UNIPROTKB|Q5ZI36 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005680 "anaphase-promoting complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005680 GO:GO:0031145
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
GeneTree:ENSGT00580000081599 OMA:AVALDNC EMBL:AADN02012741
EMBL:AADN02012739 EMBL:AJ720948 IPI:IPI00601740
RefSeq:NP_001006536.1 UniGene:Gga.9187 STRING:Q5ZI36
Ensembl:ENSGALT00000016208 GeneID:424563 KEGG:gga:424563
InParanoid:Q5ZI36 NextBio:20826883 Uniprot:Q5ZI36
Length = 507
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 50/218 (22%), Positives = 96/218 (44%)
Query: 83 TVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE 142
T ++ +G I +P+ L++P++ D ++ I+ WSS ++ V++D
Sbjct: 163 TTPASSRKHGRYIPSMPDRI--LDAPEIRN----DYYLNLID----WSS-QNFLAVALDN 211
Query: 143 ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK 202
++LW+ + +Q Q Y+S +W T + VQ WD++ +
Sbjct: 212 -CVYLWN---HSTGEIIQLLQIENPDDYVSSVSWIKEGNYLAVGTRNAEVQLWDVQQQKR 267
Query: 203 TNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVC-CN 261
S+ +H V + ++L + + IH D+R+ + + L GHT VC
Sbjct: 268 LRSMT-SHSSRVGSLSWNSYILSSGSRTGHIHHHDVRVAEHHVATLTGHTQ---EVCGLK 323
Query: 262 PEYDG-FILSAGTDSTVNLW-LVSTSNHDELPSESLVE 297
DG ++ S G D+ VN+W V + D P ++ +
Sbjct: 324 WSLDGRYLASGGNDNLVNIWPSVQGDSGDFTPVQTFTQ 361
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 128 (50.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 49/168 (29%), Positives = 80/168 (47%)
Query: 121 GKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLH-YLSGGAWDP 178
G +C L S+G L+S+ + N+ L+ ++ Q+Q KQ +G L P
Sbjct: 291 GLTHCTLAQSAGL---LLSVTTDHNLLLYEA----RSLQLQ-KQFAGYSEEVLDVRFLGP 342
Query: 179 HDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNV-DYDT-KKKHLLVTAADESGIHLW 236
D + V A+ S++ ++L++M T I H H V D +K L + A + I +W
Sbjct: 343 EDSHIVVASNSPSLKVFELQTM--TCQILHGHTDIVLALDVFRKGRLFASCAKDQSICIW 400
Query: 237 DLRMLKAP----IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
RM KA + + GHTH +CC+ + F+++ D TV LW
Sbjct: 401 --RMNKAGRVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 446
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 272 GTDSTVNLWLVSTSNHDEL---PSES--LVESPNQRANSLLNSYSDYEDSVYGL 320
G D++V L +V S +L PS S LV+ + N + + +ED V+GL
Sbjct: 558 GHDASV-LKVVFVSRGTQLLSRPSGSDGLVKLWTIKNNECVKTLDAHEDKVWGL 610
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 46/183 (25%), Positives = 84/183 (45%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDK---LVSIDEENIFLWSLDCS---NKNAQVQSK 162
Q++ L+ H G + + ++ R+DK L S ++ I +W +D ++ +
Sbjct: 5 QMKLTGTLEGHTGWVTQIATYT--RNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPV 62
Query: 163 QS-SGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS-IEHAH-VRNVDYDTK 219
+S +G H++S A++ + + +++ WDL T I H V +V +
Sbjct: 63 RSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSAD 122
Query: 220 KKHLLVTAADESGIHLWD-LRMLKAPIQELPGHTHWTWAVCCNPEY-DGFILSAGTDSTV 277
+ ++ + D+S I LW+ L K I + HT W V +P D I+SAG D V
Sbjct: 123 NRQIVSGSRDKS-IKLWNTLAQCKYTITD-DCHTDWVSTVRFSPSNRDPVIVSAGWDKVV 180
Query: 278 NLW 280
+W
Sbjct: 181 KVW 183
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 46/183 (25%), Positives = 84/183 (45%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDK---LVSIDEENIFLWSLDCS---NKNAQVQSK 162
Q++ L+ H G + + ++ R+DK L S ++ I +W +D ++ +
Sbjct: 5 QMKLTGTLEGHTGWVTQIATYT--RNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPV 62
Query: 163 QS-SGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS-IEHAH-VRNVDYDTK 219
+S +G H++S A++ + + +++ WDL T I H V +V +
Sbjct: 63 RSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSAD 122
Query: 220 KKHLLVTAADESGIHLWD-LRMLKAPIQELPGHTHWTWAVCCNPEY-DGFILSAGTDSTV 277
+ ++ + D+S I LW+ L K I + HT W V +P D I+SAG D V
Sbjct: 123 NRQIVSGSRDKS-IKLWNTLAQCKYTITD-DCHTDWVSTVRFSPSNRDPVIVSAGWDKVV 180
Query: 278 NLW 280
+W
Sbjct: 181 KVW 183
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 44/185 (23%), Positives = 85/185 (45%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGM 167
+LE + L H G++ W G+ S E+ I +W+ +++ Q+ + G
Sbjct: 3 KLELLQTLTGHAGRVWSAAWHPGGK--LFASCGEDKTIRVWNKSDTDRWV-AQTVLTDGH 59
Query: 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG-KTNSIEHAH---VRNVDYDTKKKHL 223
+ AW +A+ +++V WD +S + N+ H V++V + ++ +L
Sbjct: 60 TRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTW-SRSGNL 118
Query: 224 LVTAADESGIHLWDLRMLKAPIQE--------LPGHTHWTWAVCCNPEYDGFILSAGTDS 275
L T + + + +W++ AP QE L GHT VC +P+ D + SA D+
Sbjct: 119 LATCSRDKSVWIWEIH--HAPDQEDEYECVAVLNGHTQDVKKVCWHPQED-LLASASYDN 175
Query: 276 TVNLW 280
T+ ++
Sbjct: 176 TIRMY 180
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 65/294 (22%), Positives = 123/294 (41%)
Query: 50 SSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQ 109
S+ G+EL+ G ++W S D+R+ G G + S
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWS----DERLEMQWALEGHQLGVVSVDVSP------SGN 77
Query: 110 LERIAALDAHVGKINCVLW-WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168
+ ++LDAH+ LW SG+ ++ SID + WS+ S + + + G +
Sbjct: 78 IMASSSLDAHIR-----LWDLESGK--QIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKV 130
Query: 169 H------------------YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE-HA 209
+ ++ A+ P + + + +D+ + +++E HA
Sbjct: 131 NIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 210 H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI 268
+R++ + T + LLVTA+D+ I ++D++ L GH W V +P+ D
Sbjct: 191 MPIRSLTFSTDSQ-LLVTASDDGYIKIYDVQHASLAAT-LSGHGSWVLNVAFSPD-DAHF 247
Query: 269 LSAGTDSTVNLWLVS--TSNHDELPSESLVESP--NQRANSLLNSYSDYEDSVY 318
+S+ +D +V +W VS T H L + V N+ + +++ D E VY
Sbjct: 248 VSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 48/182 (26%), Positives = 82/182 (45%)
Query: 108 PQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167
P LER H I V + SG+ S D + LW+ C Q ++ + G
Sbjct: 8 PVLERY--FKGHKAAITSVDFSPSGKQLATASWDTF-LMLWN--CK---PQARAFRYVGH 59
Query: 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLV 225
++ + P +A+ + +V+ W GK++ + H A VR+VD+ + L
Sbjct: 60 KDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ-FLA 118
Query: 226 TAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLWLVST 284
TA+++ I +W++ + + L HTHW +P DG I+S D T+ +W T
Sbjct: 119 TASEDKSIKVWNMYRQRF-LYSLYRHTHWVRCAKFSP--DGRLIVSCSEDKTIKIW--DT 173
Query: 285 SN 286
+N
Sbjct: 174 TN 175
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 41/180 (22%), Positives = 79/180 (43%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168
QL L+ H G + + + L S ++ + +W+L + + G
Sbjct: 4 QLILKGTLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHS 63
Query: 169 HYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVT 226
H +S A++A+ + +++ W+L + T + H + V +V + + ++
Sbjct: 64 HIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSG 123
Query: 227 AADESGIHLWD-LRMLKAPIQELPGHTHWTWAVCCNPE-YDGFILSAGTDSTVNLWLVST 284
+ D S I LW+ L K I E GH+ W V +P + I+S+G D V +W +S+
Sbjct: 124 SRDRS-IKLWNTLGDCKYTITE-KGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSS 181
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 33/143 (23%), Positives = 66/143 (46%)
Query: 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG 201
++ I +W L N + + G H++S A++ + + +++ WDL +
Sbjct: 37 DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 96
Query: 202 KTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPGHTHWTWAV 258
T + H V +V + + + ++ + D++ I LW+ L + K +Q+ H+ W V
Sbjct: 97 TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ESHSEWVSCV 154
Query: 259 CCNPEYDG-FILSAGTDSTVNLW 280
+P I+S G D VN+W
Sbjct: 155 RFSPNSSNPIIVSCGWDKLVNVW 177
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 36/151 (23%), Positives = 68/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + ++ + D++ I LW+ L + K IQ+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKT-IKLWNTLGVCKYTIQD-DS 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
HT W V +P I+S G D V +W
Sbjct: 147 HTEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 177
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 165 SGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRN-VDYDTKKKHL 223
SG +S W D +A+ + +V+ WD+ S G +++ V N + Y K L
Sbjct: 254 SGHTEAISSVLWSDAD-EVCSASWDHTVRVWDVESGGLKSTLTGNKVFNCISYSPLCKRL 312
Query: 224 LVTAADESGIHLWDLRMLKAPIQELP--GHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
+ D I LWD R + L HT W +V +P +D ++S D+ V LW
Sbjct: 313 ASGSTDRH-IRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLW 370
>UNIPROTKB|F5H390 [details] [associations]
symbol:CORO1B "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 EMBL:AP003419 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2253
IPI:IPI00867659 ProteinModelPortal:F5H390 SMR:F5H390
Ensembl:ENST00000537042 ArrayExpress:F5H390 Bgee:F5H390
Uniprot:F5H390
Length = 282
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 36/149 (24%), Positives = 68/149 (45%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H + D+ CP + + + S E +WQIPE L SP E + L+ H ++
Sbjct: 81 HTGPVLDIDWCPHNDEVIA---SGSEDCTVMVWQIPE--NGLTSPLTEPVVVLEGHTKRV 135
Query: 124 NCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182
+ W + R+ L+S +N+ L W++ + + ++ S +++ +S W+ H+ +
Sbjct: 136 GIIAWHPTARN-VLLSAGCDNVVLIWNVGTAEELYRLDSLHPD-LIYNVS---WN-HNGS 189
Query: 183 AVAATC-ESSVQFWDLRSMGKTNSIEHAH 210
+ C + SV+ D R E AH
Sbjct: 190 LFCSACKDKSVRIIDPRRGTLVAEREKAH 218
>UNIPROTKB|E7EW44 [details] [associations]
symbol:CORO1B "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AP003419 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2253
IPI:IPI00908316 ProteinModelPortal:E7EW44 SMR:E7EW44
Ensembl:ENST00000453768 UCSC:uc010rps.1 ArrayExpress:E7EW44
Bgee:E7EW44 Uniprot:E7EW44
Length = 289
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 36/149 (24%), Positives = 68/149 (45%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H + D+ CP + + + S E +WQIPE L SP E + L+ H ++
Sbjct: 81 HTGPVLDIDWCPHNDEVIA---SGSEDCTVMVWQIPE--NGLTSPLTEPVVVLEGHTKRV 135
Query: 124 NCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182
+ W + R+ L+S +N+ L W++ + + ++ S +++ +S W+ H+ +
Sbjct: 136 GIIAWHPTARN-VLLSAGCDNVVLIWNVGTAEELYRLDSLHPD-LIYNVS---WN-HNGS 189
Query: 183 AVAATC-ESSVQFWDLRSMGKTNSIEHAH 210
+ C + SV+ D R E AH
Sbjct: 190 LFCSACKDKSVRIIDPRRGTLVAEREKAH 218
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 123 (48.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 135 DKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
++LVS D+ +F+WS +K + +++ + + P +A+ + S++
Sbjct: 293 ERLVSGSDDFTLFMWS-PAEDKKPLARMTGHQALINQV---LFSPDSRIIASASFDKSIK 348
Query: 194 FWDLRSMGKTNSIEHAHVRNVDYD---TKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250
WD R+ GK + HV V Y + LLV+ + +S + +WD++ K +LPG
Sbjct: 349 LWDGRT-GKYLASLRGHVAAV-YQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAA-DLPG 405
Query: 251 HTHWTWAVCCNPEYDGF-ILSAGTDSTVNLW 280
H +AV +P DG + S G D + +W
Sbjct: 406 HADEVYAVDWSP--DGQRVASGGKDKCLRIW 434
Score = 37 (18.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSS 73
YQ + I V+A T TS L G V + S G + + G WDLS+
Sbjct: 43 YQPQAIFRVRAVTRCTSSLEG-----HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLST 96
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 54/225 (24%), Positives = 96/225 (42%)
Query: 129 WSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187
WS +L+S D + I LW S A V +G + W P + N V A+
Sbjct: 231 WSPATAGRLLSGDCKSMIHLWE-PASGSWA-VDPIPFAGHTASVEDLQWSPAEEN-VFAS 287
Query: 188 C--ESSVQFWDLRSMGKTNSIEH-AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241
C + SV WD+R +GK+ ++ AH V + ++ +L + +D+ + DLR++
Sbjct: 288 CSVDGSVAVWDIR-LGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLI 346
Query: 242 K---APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE----- 293
K A + H H ++ + + D+ + +W +S +E +E
Sbjct: 347 KGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQT 406
Query: 294 -SLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDG 337
LV +P LL + +D + L W ++ P + S + DG
Sbjct: 407 KELVNTPQDLPPQLLFVHQGQKD-LKELHWHNQIPGMIISTAGDG 450
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 179 HDVNAVAATC--ESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGI 233
H + + A+C +++++ WD + G+ H V ++ D K L+ ++D S I
Sbjct: 115 HPLWTIMASCSEDATIKVWDYET-GQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLS-I 172
Query: 234 HLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284
LWD ++ L GH H +V P D F+LSA D T+ W +ST
Sbjct: 173 KLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGD-FVLSASRDHTIKQWDIST 222
>UNIPROTKB|Q32L05 [details] [associations]
symbol:FZR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0040020 "regulation of meiosis" evidence=ISS]
[GO:0090344 "negative regulation of cell aging" evidence=IEA]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0005680
GO:GO:0045732 GO:GO:0031145 GO:GO:0040020 GO:GO:0031572
GO:GO:0051488 HOGENOM:HOG000195514 HOVERGEN:HBG001024 KO:K03364
GeneTree:ENSGT00580000081606 GO:GO:0070306 GO:GO:0090344 CTD:51343
OMA:KHTNELV EMBL:DAAA02019640 EMBL:BC109826 IPI:IPI00693557
RefSeq:NP_001032698.1 UniGene:Bt.87579 STRING:Q32L05
Ensembl:ENSBTAT00000044471 GeneID:530333 KEGG:bta:530333
InParanoid:Q32L05 OrthoDB:EOG4G7BZ6 NextBio:20875234 Uniprot:Q32L05
Length = 493
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 45/202 (22%), Positives = 87/202 (43%)
Query: 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQV 159
L + +P L+ L H ++ C L WS+ H L S +N + +W N ++
Sbjct: 294 LQRDIRTPPLQSERRLQGHRQEV-CGLKWSTD-HQLLASGGNDNKLLVW-----NHSSLS 346
Query: 160 QSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGKTNSIEH-AHVRNVD 215
+Q + L + AW PH +A+ T + ++FW+ + I+ + V N+
Sbjct: 347 PVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLA 406
Query: 216 YDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274
+ L+ T ++ I +W L + +L GH++ + +P+ + + AG D
Sbjct: 407 WSKHANELVSTHGYSQNQILVWKYPSL-TQVAKLTGHSYRVLYLAMSPDGEAIVTGAG-D 464
Query: 275 STVNLWLVSTSNHDELPSESLV 296
T+ W V + S S++
Sbjct: 465 ETLRFWNVFSKTRSTKESVSVL 486
>UNIPROTKB|Q5H7B9 [details] [associations]
symbol:FZR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040020 "regulation of meiosis" evidence=ISS]
[GO:0090344 "negative regulation of cell aging" evidence=IEA]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0040020 HOGENOM:HOG000195514
HOVERGEN:HBG001024 KO:K03364 GeneTree:ENSGT00580000081606 CTD:51343
EMBL:FP016022 OrthoDB:EOG4G7BZ6 EMBL:AB192874 RefSeq:NP_001012296.1
UniGene:Ssc.15894 UniGene:Ssc.84987 STRING:Q5H7B9
Ensembl:ENSSSCT00000014727 GeneID:497234 KEGG:ssc:497234
OMA:WACHARW Uniprot:Q5H7B9
Length = 493
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 45/202 (22%), Positives = 87/202 (43%)
Query: 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQV 159
L + +P L+ L H ++ C L WS+ H L S +N + +W N ++
Sbjct: 294 LQRDIRTPPLQSERRLQGHRQEV-CGLKWSTD-HQLLASGGNDNKLLVW-----NHSSLS 346
Query: 160 QSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGKTNSIEH-AHVRNVD 215
+Q + L + AW PH +A+ T + ++FW+ + I+ + V N+
Sbjct: 347 PVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLA 406
Query: 216 YDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274
+ L+ T ++ I +W L + +L GH++ + +P+ + + AG D
Sbjct: 407 WSKHANELVSTHGYSQNQILVWKYPSL-TQVAKLTGHSYRVLYLAMSPDGEAIVTGAG-D 464
Query: 275 STVNLWLVSTSNHDELPSESLV 296
T+ W V + S S++
Sbjct: 465 ETLRFWNVFSKTRSTKESVSVL 486
>MGI|MGI:1926790 [details] [associations]
symbol:Fzr1 "fizzy/cell division cycle 20 related 1
(Drosophila)" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0031572 "G2 DNA damage checkpoint"
evidence=ISO] [GO:0040020 "regulation of meiosis" evidence=IDA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity" evidence=ISO]
[GO:0070306 "lens fiber cell differentiation" evidence=IMP]
[GO:0090344 "negative regulation of cell aging" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1926790 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0045732 GO:GO:0031145
GO:GO:0040020 GO:GO:0031572 GO:GO:0051488 HOGENOM:HOG000195514
HOVERGEN:HBG001024 KO:K03364 GeneTree:ENSGT00580000081606
GO:GO:0070306 GO:GO:0090344 CTD:51343 OMA:KHTNELV ChiTaRS:FZR1
EMBL:AF083809 EMBL:BC006616 IPI:IPI00128734 RefSeq:NP_062731.1
UniGene:Mm.24202 ProteinModelPortal:Q9R1K5 SMR:Q9R1K5 IntAct:Q9R1K5
STRING:Q9R1K5 PhosphoSite:Q9R1K5 PRIDE:Q9R1K5
Ensembl:ENSMUST00000140901 GeneID:56371 KEGG:mmu:56371
InParanoid:Q9R1K5 NextBio:312424 Bgee:Q9R1K5 Genevestigator:Q9R1K5
GermOnline:ENSMUSG00000020235 Uniprot:Q9R1K5
Length = 493
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 45/202 (22%), Positives = 87/202 (43%)
Query: 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQV 159
L + +P L+ L H ++ C L WS+ H L S +N + +W N ++
Sbjct: 294 LQRDIRTPPLQSERRLQGHRQEV-CGLKWSTD-HQLLASGGNDNKLLVW-----NHSSLS 346
Query: 160 QSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGKTNSIEH-AHVRNVD 215
+Q + L + AW PH +A+ T + ++FW+ + I+ + V N+
Sbjct: 347 PVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLA 406
Query: 216 YDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274
+ L+ T ++ I +W L + +L GH++ + +P+ + + AG D
Sbjct: 407 WSKHANELVSTHGYSQNQILVWKYPSL-TQVAKLTGHSYRVLYLAMSPDGEAIVTGAG-D 464
Query: 275 STVNLWLVSTSNHDELPSESLV 296
T+ W V + S S++
Sbjct: 465 ETLRFWNVFSKTRSTKESVSVL 486
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 51/227 (22%), Positives = 103/227 (45%)
Query: 135 DKLVSI-DEENIFLWSLDCSNKNAQVQSKQSSGM-LHYLSGGAWDPHDVNAVAATCESSV 192
DK++SI E N+ +++ + ++ + + Y++ D N + AT + +
Sbjct: 355 DKIISITSEHNLLIYNGKTLERQGEIIGYNDEIIDIKYIN-------DDNIIVATNSNEI 407
Query: 193 QFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249
+ +DL + K + H V +VD KH++ + D+S + +WDL K I +L
Sbjct: 408 KTYDLNT--KRAQVLRGHEDLVMSVDVSADGKHIISGSRDKSAM-IWDLEK-KESIAQLT 463
Query: 250 GHTHWTWAVCC--NPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL 307
GHT V P F ++A D T+ LW ++ +S + +++ ++ +
Sbjct: 464 GHTGVISCVALPKKPSTSMFAITASDDRTIKLWKGFSTTSSSGGDDS--KKKDKKISASV 521
Query: 308 NSYSDYEDSVYGLAWSSREPWIFASLSYDGRVV---VESVKPFLSRK 351
+ +E + ++ + + IFA+ S D V V +++P S K
Sbjct: 522 TKIA-HEKDINSISIAPNDK-IFATASQDSYVKLWNVNNLEPITSIK 566
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 109 (43.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 50/187 (26%), Positives = 86/187 (45%)
Query: 110 LERIAALDAHVGKIN--CVLWWSSGRHDKLVSIDEEN-IFLWSL-DCSNKNAQVQ----S 161
++ + A+D IN L W+ + L+S + +W + S++N + S
Sbjct: 187 IQDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVS 246
Query: 162 KQSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMG-KTNSIEHAH---VRNVDY 216
S G ++ W P HD A T ++V DLR+ K S H V + +
Sbjct: 247 INSDGTA--VNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRF 304
Query: 217 DTKKKHLLVTAADESG-IHLWDLR-MLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGT- 273
+ K L++ +AD +G ++LWD+R M K+PI + T + + +P +D + +AG
Sbjct: 305 NYKNS-LILASADSNGRLNLWDIRNMNKSPIATMEHGTSVS-TLEWSPNFDTVLATAGQE 362
Query: 274 DSTVNLW 280
D V LW
Sbjct: 363 DGLVKLW 369
Score = 51 (23.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 317 VYGLAWSSREPWIFASLSYDGRV 339
V ++W + +PW+ S++ D V
Sbjct: 387 VNDISWDAHDPWLMCSVANDNSV 409
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 175 AWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKH-LLVTAADE 230
A+ P + + + + +++ WD +G+ H+R V DY +K + LL + + +
Sbjct: 121 AFHPVFTSLASGSEDCTIKIWDWE-LGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSD 179
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284
I LWD A I+ L GH H +V D ++SA D T+ +W VST
Sbjct: 180 LTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVST 233
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 175 AWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNV---DYDTKKKH-LLVTAADE 230
A+ P + + + + +++ WD +G+ H+R V DY +K + LL + + +
Sbjct: 121 AFHPVFTSLASGSEDCTIKIWDWE-LGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSD 179
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284
I LWD A I+ L GH H +V D ++SA D T+ +W VST
Sbjct: 180 LTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVST 233
>UNIPROTKB|F1NXA8 [details] [associations]
symbol:DCAF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000012666
OMA:DDEECTC EMBL:AADN02071587 EMBL:AADN02071588 IPI:IPI00574318
Ensembl:ENSGALT00000008658 Uniprot:F1NXA8
Length = 385
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 180 DVNAVAATCESS-VQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235
D + + CE + V +D S ++ AH V N+ + + L T +D++ I L
Sbjct: 5 DGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNR--LFATCSDDTTIAL 62
Query: 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDG---FILSAGTDSTVNLWLVSTSNHDELP 291
WDLR L + L GHT W N EYD ++++G D V +W + D P
Sbjct: 63 WDLRKLNTKVCTLHGHTSWVK----NIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCP 117
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 67/308 (21%), Positives = 129/308 (41%)
Query: 36 LSLKEENEVHLLRLSSGGTELIC--EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGA 93
+S ++ + + R++ G ++C +GL H + + +S + S V ++ +
Sbjct: 402 VSCAKDKSIRVWRMNKDG-RVVCVAQGL-GHAHGVGAVSCSRLKE---SFVVTSSQDCTI 456
Query: 94 AIWQIPE-LYGQLNSPQLERIAALDA------HVGKINCVLWWSSGRHDKLVSIDEENIF 146
+W IPE L + + + L A H IN V + +DKL++ ++
Sbjct: 457 KVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSV---AVSPNDKLIATGSQDRL 513
Query: 147 --LWSL-DCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT 203
LWS DCS K+ + + P D ++ + +++ W L+
Sbjct: 514 AKLWSCPDCSLLGVFTGHKRGIWCVQF------SPVDQILATSSADGTLKLWGLQDFSCL 567
Query: 204 NSIE-H-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCN 261
+ E H A V + + ++ LL +D + LW ++ + ++ L GH W + N
Sbjct: 568 KTFEGHDASVLKIIFVSRGTQLLSGGSDGL-LKLWTIKTNEC-VKTLDGHEDKIWGLHTN 625
Query: 262 PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVES--PNQRANSLLNSYSDYEDSVYG 319
+ D +++A +DS++ LW T E E Q ++LL+ Y ++ G
Sbjct: 626 KQ-DDMVVTASSDSSITLWKDVTEIEQEEAQAKREEQIMKEQELSNLLHE-KRYLKAL-G 682
Query: 320 LAWSSREP 327
LA S P
Sbjct: 683 LAISLDRP 690
>ZFIN|ZDB-GENE-030131-6296 [details] [associations]
symbol:hira "HIR histone cell cycle regulation
defective homolog A (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6296
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003682
GO:GO:0016568 KO:K11293 GeneTree:ENSGT00550000074919 CTD:7290
HOGENOM:HOG000007670 HOVERGEN:HBG005969 OMA:CVSILRN
OrthoDB:EOG42NHZN EMBL:CR774200 IPI:IPI00491788 RefSeq:XP_696478.2
UniGene:Dr.77722 Ensembl:ENSDART00000132164 GeneID:568076
KEGG:dre:568076 InParanoid:A2CEX6 NextBio:20888993 Uniprot:A2CEX6
Length = 1010
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 43/170 (25%), Positives = 77/170 (45%)
Query: 106 NSPQLERIAALDAHVGKINCVLW------WSSGRHDKLVSIDEENIFLWS---LDCSNKN 156
N P+L + +D H+ +NCV W +SG DKLV + + F+ S+K
Sbjct: 58 NIPKL--LCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKL 115
Query: 157 AQVQSKQSSGMLHYLSGG----AWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-- 210
A V+ + +L +G AW PHDV + + ++++ W+ R + H
Sbjct: 116 ANVEQWRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEIVMTLKGHTG 175
Query: 211 -VRNVDYDTKKKHLLVTAADESGIHLW---DLRM---LKAPIQELPGHTH 253
V+ + +D K++ + AD+ + +W D ++ + P E G TH
Sbjct: 176 LVKGLTWDPVGKYI-ASQADDHSLKVWRTMDWQLETNITKPFSECGGTTH 224
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 37/195 (18%), Positives = 85/195 (43%)
Query: 141 DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSV-QFWDLRS 199
D+ + LW + + + ++ W + + E S+ + D+R+
Sbjct: 181 DDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLKINDVRA 240
Query: 200 MGKT-NSIEHAHVRN-VDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWA 257
T ++++ N + + +LL A +S ++L+DLR +K P+ + GH
Sbjct: 241 NNTTIDTVKCPQPFNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHMSGHEDAVNN 300
Query: 258 VCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSV 317
+ + DG ++S+G+D+ + +W + ++ P ++ P L+ ++ + SV
Sbjct: 301 LEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPE-----LIMVHAGHRSSV 355
Query: 318 YGLAWSSREPWIFAS 332
+ + PW+ AS
Sbjct: 356 NDFDLNPQIPWLVAS 370
>TAIR|locus:2039139 [details] [associations]
symbol:SPA1 "SUPPRESSOR OF PHYA-105 1" species:3702
"Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048575 "short-day photoperiodism, flowering"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:2000028 "regulation of
photoperiodism, flowering" evidence=IMP] [GO:0010017 "red or
far-red light signaling pathway" evidence=IMP] [GO:0010114
"response to red light" evidence=IEP] [GO:0010218 "response to far
red light" evidence=IEP] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0048608 "reproductive
structure development" evidence=RCA] [GO:0009585 "red, far-red
light phototransduction" evidence=IGI] InterPro:IPR017986
InterPro:IPR000719 InterPro:IPR001680 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400 PROSITE:PS00107
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009640 GO:GO:0010218
GO:GO:0010114 GO:GO:0009658 GO:GO:0004672 GO:GO:0009585
EMBL:AC006526 HSSP:P16649 GO:GO:0080008 GO:GO:0010100 GO:GO:0048575
EMBL:AF135455 EMBL:AK227186 EMBL:AK221994 IPI:IPI00541649
PIR:F84901 PIR:G84901 RefSeq:NP_182157.2 UniGene:At.11156
ProteinModelPortal:Q9SYX2 SMR:Q9SYX2 IntAct:Q9SYX2 MINT:MINT-276478
STRING:Q9SYX2 PaxDb:Q9SYX2 PRIDE:Q9SYX2 EnsemblPlants:AT2G46340.1
GeneID:819242 KEGG:ath:AT2G46340 GeneFarm:2885 TAIR:At2g46340
HOGENOM:HOG000029775 InParanoid:Q9SYX2 KO:K16240 OMA:LKSELIC
PhylomeDB:Q9SYX2 ProtClustDB:CLSN2918282 Genevestigator:Q9SYX2
GO:GO:2000028 Uniprot:Q9SYX2
Length = 1029
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 45/172 (26%), Positives = 75/172 (43%)
Query: 122 KINCVLWWSSGRHDKLVSIDEENIF-LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180
K++CV W +S + L S D + + +W +Q Q S DP
Sbjct: 767 KLSCVCW-NSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPS--DP-- 821
Query: 181 VNAVAATCESSVQFWDLRSMGKTNSI-EHAHVRNVDYDTKKKHLLVTAADESGIHLWDLR 239
V+ + + SV+ W + +I A+V V + + HLL + + ++ +DLR
Sbjct: 822 TKFVSGSDDCSVKLWSINEKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLR 881
Query: 240 MLKAPIQELPGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLWLVSTSNHDEL 290
+K P L GH AV D I+SA TD+++ LW ++ +N L
Sbjct: 882 YVKTPWCTLAGHEK---AVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGL 930
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 49/201 (24%), Positives = 84/201 (41%)
Query: 82 STVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141
ST S G +A+ Q L +P +E L H G+I C + S+G++ S+D
Sbjct: 26 STARSGGYGESSALIQAAPRLSSLQAPLME----LSGHSGEIFCAKFNSAGQYIASGSMD 81
Query: 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG 201
+I LW + +N + S +L W +A+ + + WDL +
Sbjct: 82 R-SILLWRANGDCENYGILSGHRGAILDL----QWSRDSDIIFSASADMHLASWDLTTGE 136
Query: 202 KTNS-IEHAHVRN-VDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVC 259
+ + H V N +D + + +L + +D+ I +WD R K + T AV
Sbjct: 137 RIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRK-KHAADYIESDFPVT-AVA 194
Query: 260 CNPEYDGFILSAGTDSTVNLW 280
+ E I S G D+ + +W
Sbjct: 195 IS-EAGNEIYSGGIDNDIKVW 214
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 54/238 (22%), Positives = 104/238 (43%)
Query: 57 ICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE-SYGAAIWQIP-ELYGQLNSPQLERIA 114
+C+G H + +S P QR F+TG +W E G+ S +++
Sbjct: 188 VCKG---HERGVDSVSVSPDGQR-----FATGSWDTMLKVWSAELEDAGEGTSKRMKESG 239
Query: 115 A------LDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168
L H I+ V W + L + + +W L A++ + +S
Sbjct: 240 VRTPKITLQGHRESISAVQWMDAST--LLTGSWDHTLKVWDLSLEGIKAEISTNKS---- 293
Query: 169 HYLSGGAWDPHDVNAVAATCESSVQFWDLR----SMGKTNSIEH-AHVRNVDYDTKKKHL 223
+ ++ + + A+ + +++ +D R S+ + + H A V+ V + T ++ L
Sbjct: 294 --IFDASYSKLNHLILTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFL 351
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAV-CCNPEYDGFILSAGTDSTVNLW 280
V+ + ++ LWD R KAP+ +L GH + NP+Y I+S G+D+TV ++
Sbjct: 352 FVSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWTNPKY---IVSGGSDNTVRVF 406
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 54/238 (22%), Positives = 104/238 (43%)
Query: 57 ICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE-SYGAAIWQIP-ELYGQLNSPQLERIA 114
+C+G H + +S P QR F+TG +W E G+ S +++
Sbjct: 188 VCKG---HERGVDSVSVSPDGQR-----FATGSWDTMLKVWSAELEDAGEGTSKRMKESG 239
Query: 115 A------LDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168
L H I+ V W + L + + +W L A++ + +S
Sbjct: 240 VRTPKITLQGHRESISAVQWMDAST--LLTGSWDHTLKVWDLSLEGIKAEISTNKS---- 293
Query: 169 HYLSGGAWDPHDVNAVAATCESSVQFWDLR----SMGKTNSIEH-AHVRNVDYDTKKKHL 223
+ ++ + + A+ + +++ +D R S+ + + H A V+ V + T ++ L
Sbjct: 294 --IFDASYSKLNHLILTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFL 351
Query: 224 LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAV-CCNPEYDGFILSAGTDSTVNLW 280
V+ + ++ LWD R KAP+ +L GH + NP+Y I+S G+D+TV ++
Sbjct: 352 FVSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKY---IVSGGSDNTVRVF 406
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 59/242 (24%), Positives = 111/242 (45%)
Query: 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170
E++ +AH I + + + L D+ + LW+ + N A Q+ + G H+
Sbjct: 88 EKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWE--NNWALEQTFE--GHEHF 142
Query: 171 LSGGAWDPHDVNAVAATC-ESSVQFWDLRSMGKTNSIEHAHVRNVDY-D---TKKKHLLV 225
+ A++P D + A+ C + +V+ W L ++ R V+Y D K ++
Sbjct: 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202
Query: 226 TAADESGIHLWDLRMLKAPIQELPGH-THWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284
TA+D+ I +WD + K+ + L GH ++ ++AV +P I+S D T+ +W ST
Sbjct: 203 TASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVF-HPTLP-IIISGSEDGTLKIWNSST 259
Query: 285 SNHDELPSESLVES------PNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGR 338
++ + L S P R N + S +++ L+ + EP + SL G+
Sbjct: 260 YKVEKTLNVGLERSWCIATHPTGRKNYIA---SGFDNGFTVLSLGNDEPTL--SLDPVGK 314
Query: 339 VV 340
+V
Sbjct: 315 LV 316
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D +VS +++I LW L +K V ++ +G H++ A++ + + ++
Sbjct: 29 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQEL-P 249
WDL + T + H V +V + + + V+A+ + I LW+ L K I E
Sbjct: 89 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI-VSASRDRTIKLWNTLGECKYTISEGGE 147
Query: 250 GHTHWTWAVCCNPE-YDGFILSAGTDSTVNLWLVS 283
GH W V +P I+SA D TV +W +S
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
>UNIPROTKB|Q5FW06 [details] [associations]
symbol:dcaf10 "DDB1- and CUL4-associated factor 10"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0080008
GeneTree:ENSGT00390000012666 HOGENOM:HOG000006516
HOVERGEN:HBG055755 KO:K11802 OrthoDB:EOG4Z36DS CTD:79269
EMBL:CR762027 EMBL:BC089677 RefSeq:NP_001015742.2 UniGene:Str.66215
ProteinModelPortal:Q5FW06 Ensembl:ENSXETT00000004775 GeneID:548459
KEGG:xtr:548459 Xenbase:XB-GENE-967155 InParanoid:Q5FW06
OMA:SASPCHH Bgee:Q5FW06 Uniprot:Q5FW06
Length = 457
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 49/184 (26%), Positives = 80/184 (43%)
Query: 121 GKINCVLWWSSGRH-DKLVSID--EENI-FLWSLDCSNKNAQ-VQ-SKQSSGMLHYLSGG 174
G + WW R + + +D +N + SL S A V S ++ G + L
Sbjct: 17 GTAGSIFWWLKNRCLGRGLCVDPARDNFRTMTSLYSSIHPADSVNLSTRTHGAVFNLE-- 74
Query: 175 AWDPHDVNAVAATCESS-VQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADE 230
+ P D + + CE + V +D S ++ AH V N+ + + + T +D+
Sbjct: 75 -YSP-DGSVLTVACEQTEVLLFDPVSSKHIKTLSEAHEDCVNNIRFLDNR--MFATCSDD 130
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG---FILSAGTDSTVNLWLVSTSNH 287
+ I LWDLR L + + L GHT W N EYD ++++G D V +W +
Sbjct: 131 TTIALWDLRKLNSKVCTLHGHTSWVK----NIEYDTNTRLLVTSGFDGNVIIWDTNRCTE 186
Query: 288 DELP 291
D P
Sbjct: 187 DGCP 190
>DICTYBASE|DDB_G0279903 [details] [associations]
symbol:wdr12 "NLE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279903 GO:GO:0005654 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042273 GO:GO:0006364
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HAMAP:MF_03029
EMBL:AAFI02000034 RefSeq:XP_641483.1 ProteinModelPortal:Q54W52
STRING:Q54W52 EnsemblProtists:DDB0233985 GeneID:8622282
KEGG:ddi:DDB_G0279903 OMA:DCTINLW Uniprot:Q54W52
Length = 463
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 65/326 (19%), Positives = 140/326 (42%)
Query: 5 SSGIGYGLKYQARC-ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFS 63
S+G G+ ++ C ISD AD + SF++ ++ K + + S L C L
Sbjct: 147 STGTGHLAGVKSVCWISDKNAD--NLSFVSASMD-KTLRVWNFNKSQSEIKALAC--LKE 201
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H I + P RI S + +W I ++ Q ++ I ++ ++
Sbjct: 202 HTGTIESVYVSPDSSRIVSASMDST----IKLWSIKDIPNQ-HATTSSSIEKSNSKKRRL 256
Query: 124 NCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA 183
++ +++ ++D+++ + ++ S + V + Q ++++ +
Sbjct: 257 ------ANNTNNETAAVDQQSEIIHNITESLASVTVPNSQGVTVVNWTT-------QFQM 303
Query: 184 VAATCESSVQFWDLRSMGKTNSIEH-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRM-- 240
++ + +S ++ WD+ ++ ++I A + ++DY + + L+VTA + + +WD R
Sbjct: 304 LSGSMDSKIRLWDVSTLVANDTIPTPAPLTDLDY-SMESGLIVTAHKDRIVRIWDPRSSD 362
Query: 241 -LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTS-----------NHD 288
K+ Q L H W +V NP S D TV W + T + D
Sbjct: 363 ETKSQTQSLISHKTWVTSVNWNPSSKYHCCSTSHDGTVKYWDIRTKIPLYTIDTLEKSKD 422
Query: 289 ELPSESLVESPNQRAN--SLLNSYSD 312
++ S S + + N+ N S+++ +D
Sbjct: 423 KVLSSSFISNKNKNINDYSIVSGGTD 448
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 45/176 (25%), Positives = 77/176 (43%)
Query: 111 ERIAALDAHVG-KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH 169
E IA + H+ +++ V + SGR D + LW L+ K + + + +H
Sbjct: 343 ESIADITGHMPHRVSKVAFHPSGRFLATACYDS-SWRLWDLE--QKTEVLHQEGHAKPVH 399
Query: 170 YLSGGAWDPHDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLL 224
LS H +V T ++ + WDLR+ G+ H V VD+ H+
Sbjct: 400 CLSY-----HSDGSVLVTGGLDAFGRVWDLRT-GRCIMFLEGHLGAVFGVDFSPNGFHI- 452
Query: 225 VTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
T + ++ +WDLR + P+ +P HT+ V E F+++ DST +W
Sbjct: 453 ATGSQDNTCKIWDLRR-RQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIW 507
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 95 (38.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 24/103 (23%), Positives = 48/103 (46%)
Query: 184 VAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKK------KHLLVTAADESGIHLWD 237
V +C+ + WDL K ++ + R Y + + + +++S +++W+
Sbjct: 414 VNLSCQE-IHLWDLAGEWK-QPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWN 471
Query: 238 LRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
L+ K P++ L GH+ V NP+ + SA D T+ +W
Sbjct: 472 LKNTK-PLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 67 (28.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 31/139 (22%), Positives = 55/139 (39%)
Query: 61 LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120
L +H NE+W + + +T S A IW++ L+ ++E L++H
Sbjct: 220 LVAHKNEVWFVQFSN-SGKYLATASS---DCTAIIWKV------LDDNKVELKHTLESHQ 269
Query: 121 GKINCVLWWSSGRHDKLVSIDEENIF-LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH 179
++ V W S KL++ + LW +D + ++G +S AW P
Sbjct: 270 NPVSFVSW--SPDDTKLLTCGNAEVLKLWDVD-TGVLRHTFGNNNTGFT--VSSCAWFPD 324
Query: 180 DVNAVAATC--ESSVQFWD 196
V + E + WD
Sbjct: 325 STRLVCGSSDPERGIVMWD 343
>RGD|2382 [details] [associations]
symbol:Coro1b "coronin, actin-binding protein, 1B" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IBA] [GO:0030036 "actin cytoskeleton
organization" evidence=IBA] [GO:0051015 "actin filament binding"
evidence=IBA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:2382 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953
Pfam:PF08954 CTD:57175 KO:K13886 EMBL:AJ006064 IPI:IPI00209397
RefSeq:NP_062095.1 UniGene:Rn.2819 ProteinModelPortal:O89046
SMR:O89046 IntAct:O89046 MINT:MINT-2982709 STRING:O89046
PhosphoSite:O89046 PRIDE:O89046 GeneID:29474 KEGG:rno:29474
UCSC:RGD:2382 InParanoid:O89046 NextBio:609304 Genevestigator:O89046
GermOnline:ENSRNOG00000021828 Uniprot:O89046
Length = 484
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 47/195 (24%), Positives = 84/195 (43%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H + D+ CP + + + S E +WQIPE L SP E + L+ H ++
Sbjct: 81 HTGPVLDIDWCPHNDEVIA---SGSEDCTVMVWQIPE--NGLTSPLTEPVVVLEGHTKRV 135
Query: 124 NCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182
+ W + R+ L+S +N+ L W++ + + ++ S +++ +S W+ H+ +
Sbjct: 136 GIITWHPTARN-VLLSAGCDNVVLIWNVGTAEELYRLDSLHPD-LIYNVS---WN-HNGS 189
Query: 183 AVAATC-ESSVQFWDLRSMGKTNSIEHAH-----VRNVDY-DTKKKHLLVTAADESGIHL 235
C + SV+ D R E AH +R + D K + E + L
Sbjct: 190 LFCTACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTAGFSRMSERQLAL 249
Query: 236 WDLRMLKAP--IQEL 248
WD + P +QEL
Sbjct: 250 WDPENFEEPMALQEL 264
>UNIPROTKB|G3V940 [details] [associations]
symbol:Coro1b "Coronin" species:10116 "Rattus norvegicus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:2382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
OMA:QGERICR UniGene:Rn.2819 EMBL:CH473953 ProteinModelPortal:G3V940
Ensembl:ENSRNOT00000029829 Uniprot:G3V940
Length = 484
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 47/195 (24%), Positives = 84/195 (43%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H + D+ CP + + + S E +WQIPE L SP E + L+ H ++
Sbjct: 81 HTGPVLDIDWCPHNDEVIA---SGSEDCTVMVWQIPE--NGLTSPLTEPVVVLEGHTKRV 135
Query: 124 NCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182
+ W + R+ L+S +N+ L W++ + + ++ S +++ +S W+ H+ +
Sbjct: 136 GIITWHPTARN-VLLSAGCDNVVLIWNVGTAEELYRLDSLHPD-LIYNVS---WN-HNGS 189
Query: 183 AVAATC-ESSVQFWDLRSMGKTNSIEHAH-----VRNVDY-DTKKKHLLVTAADESGIHL 235
C + SV+ D R E AH +R + D K + E + L
Sbjct: 190 LFCTACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249
Query: 236 WDLRMLKAP--IQEL 248
WD + P +QEL
Sbjct: 250 WDPENFEEPMALQEL 264
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 35/155 (22%), Positives = 68/155 (43%)
Query: 189 ESSVQFWDLRS-MGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA- 243
+S + WD R+ +E AH + VD++ +L++T + ++ + ++D R L +
Sbjct: 294 DSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSN 353
Query: 244 ----PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESP 299
P+ + GH V +P+ S+ D +N+W + D + +S E
Sbjct: 354 GVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIW-----DCDRVGKKS--ERA 406
Query: 300 NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334
+ + L ++ + D V WS PW S+S
Sbjct: 407 TKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVS 441
>UNIPROTKB|E2R7N5 [details] [associations]
symbol:PPP1CA "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:57175 KO:K13886
EMBL:AAEX03011616 EMBL:AAEX03011614 EMBL:AAEX03011615
RefSeq:XP_533215.2 ProteinModelPortal:E2R7N5
Ensembl:ENSCAFT00000018367 GeneID:476007 KEGG:cfa:476007
NextBio:20851738 Uniprot:E2R7N5
Length = 489
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 48/194 (24%), Positives = 84/194 (43%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H + D+ CP + + + S E +WQIPE L SP E + L+ H ++
Sbjct: 81 HTGPVLDIDWCPHNDEVIA---SGSEDCTVMVWQIPE--NGLTSPLTEPVVVLEGHTKRV 135
Query: 124 NCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182
V W + R+ L+S +N+ L W++ + + ++ S +++ +S W+ +
Sbjct: 136 GIVTWHPTARN-VLLSAGCDNVVLIWNVGTAEELYRLDSLHPD-LIYNVS---WNRNGSL 190
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEHAH-----VRNVDY-DTKKKHLLVTAADESGIHLW 236
+A + SV+ D R E AH +R + D K + E + LW
Sbjct: 191 FCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLALW 250
Query: 237 DLRMLKAP--IQEL 248
D L+ P +QEL
Sbjct: 251 DPENLEEPMALQEL 264
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 122 (48.0 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 42/162 (25%), Positives = 84/162 (51%)
Query: 180 DVNAVAA-TCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235
++N +A + + S + W++++ GK I H + V + + LL TA +++ + L
Sbjct: 774 NINYLATGSNDKSARLWEIQT-GKCVRIFMGHRAPIYTVAFSPDGR-LLATAGEDTSVIL 831
Query: 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGT-DSTVNLWLVSTSNHDELPSE- 293
WDL K ++++ GHT +++ + DG IL++G+ D TV LW V + + L ++
Sbjct: 832 WDLSTGKK-VKKMDGHTKCVYSL--DFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQP 888
Query: 294 -SLVESPNQR---------ANSLLNSYSDYEDSVYGLAWSSR 325
SL+ +++ ++ LL +Y + VY + +S R
Sbjct: 889 SSLINDESRKRKTLKSKLFSDELLETYPTKQTPVYNVCFSRR 930
Score = 44 (20.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 36 LSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF 76
LS E+ L + + + L+C + P +WD+S PF
Sbjct: 695 LSCSEDTTARLWSMETM-SNLVCYKGHNFP--VWDVSFSPF 732
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 52/189 (27%), Positives = 79/189 (41%)
Query: 96 WQIP-ELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSN 154
W P +LY ++ S + A+D G W++SG D+++ I W L
Sbjct: 170 WHAPWKLY-RVASGHTGWVRAVDVEPGN----QWFASGGADRIIKI-------WDL---- 213
Query: 155 KNAQVQSKQS-SGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRN 213
A Q K S +G + + P + + V+ WDL K H H+
Sbjct: 214 --ASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLE-YNKVIRHYHGHLSA 270
Query: 214 VDYDTKKKHL--LVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSA 271
V + L LVT A +S +WD+R KA + GHT+ V C D +++A
Sbjct: 271 VQALSVHPSLDVLVTCARDSTARVWDMRT-KAQVHCFAGHTNTVADVVCQ-SVDPQVITA 328
Query: 272 GTDSTVNLW 280
D+TV LW
Sbjct: 329 SHDATVRLW 337
>UNIPROTKB|E2R4Z3 [details] [associations]
symbol:FZR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090344 "negative regulation of cell aging"
evidence=IEA] [GO:0070306 "lens fiber cell differentiation"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0040020 "regulation of
meiosis" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0005680 GO:GO:0045732
GO:GO:0031145 GO:GO:0040020 GO:GO:0031572 GO:GO:0051488 KO:K03364
GeneTree:ENSGT00580000081606 GO:GO:0070306 GO:GO:0090344 CTD:51343
OMA:KHTNELV EMBL:AAEX03012579 RefSeq:XP_542177.3
ProteinModelPortal:E2R4Z3 Ensembl:ENSCAFT00000030508 GeneID:485059
KEGG:cfa:485059 NextBio:20859124 Uniprot:E2R4Z3
Length = 496
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 46/202 (22%), Positives = 89/202 (44%)
Query: 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQV 159
L + +P L+ L H ++ C L WS+ H L S +N + +W N ++
Sbjct: 294 LQRDIRTPPLQSERRLQGHRQEV-CGLKWSTD-HQLLASGGNDNKLLVW-----NHSSLS 346
Query: 160 QSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGKTNSIEH-AHVRNVD 215
+Q + L + AW PH +A+ T + ++FW+ + I+ + V N+
Sbjct: 347 PVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLA 406
Query: 216 YDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274
+ L+ T ++ I +W L + +L GH++ + +P+ + + AG D
Sbjct: 407 WSKHANELVSTHGYSQNQILVWKYPSL-TQVAKLTGHSYRVLYLAMSPDGEAIVTGAG-D 464
Query: 275 STVNLWLV-STSNHDELPSESL 295
T+ W V S + ++ ES+
Sbjct: 465 ETLRFWNVFSKTRSTKVKWESV 486
>UNIPROTKB|Q9UM11 [details] [associations]
symbol:FZR1 "Fizzy-related protein homolog" species:9606
"Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0040020 "regulation of meiosis" evidence=IEA]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA]
[GO:0090344 "negative regulation of cell aging" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051488 "activation
of anaphase-promoting complex activity" evidence=IDA] [GO:0031572
"G2 DNA damage checkpoint" evidence=IDA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0070979 "protein K11-linked ubiquitination" evidence=TAS]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IGI]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 GO:GO:0031965
eggNOG:COG2319 GO:GO:0051436 GO:GO:0045732 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 GO:GO:0070979 GO:GO:0040020
GO:GO:0031572 CleanEx:HS_CDH1 GO:GO:0051488 Reactome:REACT_383
HOVERGEN:HBG001024 KO:K03364 GO:GO:0070306 GO:GO:0090344
EMBL:AF102508 EMBL:AF102507 EMBL:AB013462 EMBL:AB013463
EMBL:AF080397 EMBL:AF083810 EMBL:AF433157 EMBL:BT007115
EMBL:AC005787 EMBL:AC005786 EMBL:AB033068 EMBL:BC013413
IPI:IPI00043958 IPI:IPI00099464 IPI:IPI00383919
RefSeq:NP_001129669.1 RefSeq:NP_001129670.1 RefSeq:NP_057347.2
UniGene:Hs.413133 ProteinModelPortal:Q9UM11 SMR:Q9UM11
DIP:DIP-38700N IntAct:Q9UM11 MINT:MINT-1415280 STRING:Q9UM11
PhosphoSite:Q9UM11 DMDM:37537753 PRIDE:Q9UM11 DNASU:51343
Ensembl:ENST00000313639 Ensembl:ENST00000395095
Ensembl:ENST00000441788 GeneID:51343 KEGG:hsa:51343 UCSC:uc002lxt.2
UCSC:uc002lxv.2 UCSC:uc010dtk.2 CTD:51343 GeneCards:GC19P003506
HGNC:HGNC:24824 HPA:HPA043536 MIM:603619 neXtProt:NX_Q9UM11
PharmGKB:PA134896003 InParanoid:Q9UM11 OMA:KHTNELV ChiTaRS:FZR1
GenomeRNAi:51343 NextBio:54790 Bgee:Q9UM11 Genevestigator:Q9UM11
GermOnline:ENSG00000105325 Uniprot:Q9UM11
Length = 496
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 46/202 (22%), Positives = 89/202 (44%)
Query: 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQV 159
L + +P L+ L H ++ C L WS+ H L S +N + +W N ++
Sbjct: 294 LQRDIRTPPLQSERRLQGHRQEV-CGLKWSTD-HQLLASGGNDNKLLVW-----NHSSLS 346
Query: 160 QSKQSSGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGKTNSIEH-AHVRNVD 215
+Q + L + AW PH +A+ T + ++FW+ + I+ + V N+
Sbjct: 347 PVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLA 406
Query: 216 YDTKKKHLLVTAA-DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274
+ L+ T ++ I +W L + +L GH++ + +P+ + + AG D
Sbjct: 407 WSKHANELVSTHGYSQNQILVWKYPSL-TQVAKLTGHSYRVLYLAMSPDGEAIVTGAG-D 464
Query: 275 STVNLWLV-STSNHDELPSESL 295
T+ W V S + ++ ES+
Sbjct: 465 ETLRFWNVFSKTRSTKVKWESV 486
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 40/169 (23%), Positives = 71/169 (42%)
Query: 113 IAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYL 171
+ L H ++ VLW + D+L S + I LW + + + + + + Y
Sbjct: 249 LMTLSGHNEAVSSVLWMDA---DELCSASWDHTIRLWDAETGGQKSTLSGSKVFNCISY- 304
Query: 172 SGGAWDPHDVNAVAATCESSVQFWDLRSMGKT----NSIEH-AHVRNVDYDTKKKHLLVT 226
P + + + V+ WD RS + + H V V + +H LV+
Sbjct: 305 -----SPLCRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVS 359
Query: 227 AADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275
+ ++ + LWD R KAP+ +L H +C + +G ILS G D+
Sbjct: 360 GSLDNVVKLWDTRSCKAPLYDLAAHEDKV--LCADWTENGLILSGGADN 406
>UNIPROTKB|F1Q473 [details] [associations]
symbol:PPP1CA "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 EMBL:AAEX03011616
EMBL:AAEX03011614 EMBL:AAEX03011615 Ensembl:ENSCAFT00000039783
Uniprot:F1Q473
Length = 501
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 48/194 (24%), Positives = 84/194 (43%)
Query: 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI 123
H + D+ CP + + + S E +WQIPE L SP E + L+ H ++
Sbjct: 81 HTGPVLDIDWCPHNDEVIA---SGSEDCTVMVWQIPE--NGLTSPLTEPVVVLEGHTKRV 135
Query: 124 NCVLWWSSGRHDKLVSIDEENIFL-WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182
V W + R+ L+S +N+ L W++ + + ++ S +++ +S W+ +
Sbjct: 136 GIVTWHPTARN-VLLSAGCDNVVLIWNVGTAEELYRLDSLHPD-LIYNVS---WNRNGSL 190
Query: 183 AVAATCESSVQFWDLRSMGKTNSIEHAH-----VRNVDY-DTKKKHLLVTAADESGIHLW 236
+A + SV+ D R E AH +R + D K + E + LW
Sbjct: 191 FCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLALW 250
Query: 237 DLRMLKAP--IQEL 248
D L+ P +QEL
Sbjct: 251 DPENLEEPMALQEL 264
>TAIR|locus:505006640 [details] [associations]
symbol:AT5G27945 "AT5G27945" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005680 "anaphase-promoting complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K03363
IPI:IPI00534669 RefSeq:NP_568505.1 UniGene:At.55046
ProteinModelPortal:F4K5R6 SMR:F4K5R6 EnsemblPlants:AT5G27945.1
GeneID:832862 KEGG:ath:AT5G27945 PhylomeDB:F4K5R6 Uniprot:F4K5R6
Length = 428
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 73/280 (26%), Positives = 125/280 (44%)
Query: 27 DHTSFLTGTL-SLKEEN-EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTV 84
D +S T L ++ +EN V + + G +L GL + ++WD C ++ + T+
Sbjct: 136 DASSCYTSKLVTIDDENGPVTSINWTQDGLDLAV-GLDNSEVQVWD---CVSNRHV-RTL 190
Query: 85 FSTGES-YGAAIWQIPELY-----GQL-NSPQLERIAALDAHVGKIN--CVLWWS-SGRH 134
ES G+ W L G++ N+ R + + +VG C L WS SG+
Sbjct: 191 RGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGK- 249
Query: 135 DKLVSIDEENIF-LW--SLDCSNKNAQV--QSKQSSGMLHYLSGGAWDPHDVNAVAA--- 186
KL S +N+ +W SL SN Q + ++ + + L AW P + +A
Sbjct: 250 -KLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRAL---AWCPFQASLLATGGG 305
Query: 187 TCESSVQFWDLRSMGKTNSIEH-AHVRNVDYDTKKKHLLVTAA-DESGIHLWDL-RMLKA 243
+ + FW+ + NS+E + V ++ + ++ LL ++ + LW M+K
Sbjct: 306 VGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVK- 364
Query: 244 PIQELPGHTHWTWAVCCNPEYDGF-ILSAGTDSTVNLWLV 282
+ EL GHT + +P DG + SA D T+ LW V
Sbjct: 365 -MAELNGHTSRVLFMAQSP--DGCTVASAAGDETLRLWNV 401
>RGD|1304773 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1304773 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 KO:K10143 CTD:64326 HOVERGEN:HBG054995 EMBL:BC091284
IPI:IPI00363852 RefSeq:NP_001020297.1 UniGene:Rn.8617
ProteinModelPortal:Q5BJY0 PhosphoSite:Q5BJY0 GeneID:360860
KEGG:rno:360860 NextBio:674404 Genevestigator:Q5BJY0 Uniprot:Q5BJY0
Length = 433
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 47/165 (28%), Positives = 73/165 (44%)
Query: 122 KINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180
KI+C+ W SS + L S D E + LW + + ++V + + DP
Sbjct: 174 KISCISW-SSYHKNLLASSDYEGTVILWD-GFTGQRSKVYQEHEKRCWS-VDFNLMDPKL 230
Query: 181 VNAVAATCESSVQFWDLRSMGKTNSIE-HAHVRNVDYDTKKK-HLLVTAADESGIHLWDL 238
+ + + ++ V+ W SIE A+V V + + HL AD +H +DL
Sbjct: 231 L--ASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHC-VHYYDL 287
Query: 239 RMLKAPIQELPGHTHW-TWAVCCNPEYDGFILSAGTDSTVNLWLV 282
R K PI GH ++A + E I+SA TDS + LW V
Sbjct: 288 RNTKQPIMVFKGHRKAVSYAKFVSGEE---IVSASTDSQLKLWNV 329
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 115 (45.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 216 YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275
+D +++ + I +WD+R K + +L HT + G S D
Sbjct: 442 FDNFSEYIFSCGYSDGLISVWDMRYNKESLLKLKYHTQGINRIKFGMISSGIFASCSDDG 501
Query: 276 TVNLWLVSTSNHDE-LP----SESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIF 330
T +W +S +N+ + LP + + +PN LL + + S+Y LAW++ +
Sbjct: 502 TACIWDISRNNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTI 561
Query: 331 ASLSYDGRVVV 341
A++ D + V
Sbjct: 562 ATVGVDNSIHV 572
Score = 46 (21.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 182 NAVAATC--ESSVQFWDLRSMGKTNSIEHAHVRN-----VDYDTK 219
N + A+C + S+ WD+ K+N + + N DY+ K
Sbjct: 323 NLLLASCSVDGSICLWDINKGTKSNDVPRTYGLNKSGKTADYNIK 367
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 115 (45.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 216 YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275
+D +++ + I +WD+R K + +L HT + G S D
Sbjct: 442 FDNFSEYIFSCGYSDGLISVWDMRYNKESLLKLKYHTQGINRIKFGMISSGIFASCSDDG 501
Query: 276 TVNLWLVSTSNHDE-LP----SESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIF 330
T +W +S +N+ + LP + + +PN LL + + S+Y LAW++ +
Sbjct: 502 TACIWDISRNNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTI 561
Query: 331 ASLSYDGRVVV 341
A++ D + V
Sbjct: 562 ATVGVDNSIHV 572
Score = 46 (21.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 182 NAVAATC--ESSVQFWDLRSMGKTNSIEHAHVRN-----VDYDTK 219
N + A+C + S+ WD+ K+N + + N DY+ K
Sbjct: 323 NLLLASCSVDGSICLWDINKGTKSNDVPRTYGLNKSGKTADYNIK 367
>ZFIN|ZDB-GENE-020919-2 [details] [associations]
symbol:sec31a "sec31 homolog A (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0001889 "liver development"
evidence=IMP] [GO:0007029 "endoplasmic reticulum organization"
evidence=IMP] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0030134 "ER to Golgi transport vesicle"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-020919-2 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 GO:GO:0001889 GO:GO:0007029 GO:GO:0055123
GO:GO:0030134 CTD:22872 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 OrthoDB:EOG4WDDB3 EMBL:BC054909
IPI:IPI00496799 RefSeq:NP_955824.1 UniGene:Dr.19511
ProteinModelPortal:Q7SYD5 STRING:Q7SYD5 PRIDE:Q7SYD5 GeneID:266638
KEGG:dre:266638 InParanoid:Q7SYD5 NextBio:20804816
ArrayExpress:Q7SYD5 Uniprot:Q7SYD5
Length = 1254
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 62/277 (22%), Positives = 119/277 (42%)
Query: 32 LTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF---DQRIFSTVF-ST 87
L T S E+ L L+ + G FS P+ L P +Q + S V +
Sbjct: 33 LDATFSTNASLEIFELDLADSALAMKSCGSFSSPHRYHKLVWGPHGIENQGLPSGVLIAG 92
Query: 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI-DEENIF 146
GE+ ++ ++ +S + I+ + H G + L +S + + + S +E I+
Sbjct: 93 GENGNIILYDASKIIAG-DSEVI--ISQSEKHTGAVRA-LDVNSFQSNLVASGGNESEIY 148
Query: 147 LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS-VQFWDLRSMGKTNS 205
+W D +N ++ + + +S AW+ + +A+ S WDLR
Sbjct: 149 IW--DLNNFSSPMTPGPKTQPQEDISCVAWNKQVQHILASASPSGKASVWDLRKNDLIIK 206
Query: 206 I-EHA---HVRNVDYDTKKKHLLVTAADESG---IHLWDLRMLKAPIQELPGHTHWTWAV 258
+ +H+ H + ++ + LV A+++ I +WDLR +P++ L HT A+
Sbjct: 207 VSDHSNRMHCSGLAWNPEVATQLVLASEDDRMPVIQMWDLRFATSPLKVLENHTRGILAI 266
Query: 259 CCNPEYDGFILSAGTDSTVNLWLVSTSNH-DELPSES 294
+ +LS G D+ + W +T+ ELP+ +
Sbjct: 267 AWSVADPELLLSCGKDNRILCWNPNTAEVLYELPTST 303
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 63/321 (19%), Positives = 120/321 (37%)
Query: 48 RLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNS 107
++ +G +E+I H + L F + ++ + E Y IW + +S
Sbjct: 105 KIIAGDSEVIISQSEKHTGAVRALDVNSFQSNLVASGGNESEIY---IWDL----NNFSS 157
Query: 108 PQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167
P I+CV W +H + +W D + ++ S
Sbjct: 158 PMTPGPKTQPQE--DISCVAWNKQVQHILASASPSGKASVW--DLRKNDLIIKVSDHSNR 213
Query: 168 LHYLSGGAWDPHDVNAVAATCESS----VQFWDLRSMGKTNSIEHAHVRNV---DYDTKK 220
+H SG AW+P + E +Q WDLR + H R + +
Sbjct: 214 MH-CSGLAWNPEVATQLVLASEDDRMPVIQMWDLRFATSPLKVLENHTRGILAIAWSVAD 272
Query: 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280
LL++ ++ I W+ + + ELP T W + + P + +A D ++++
Sbjct: 273 PELLLSCGKDNRILCWNPNTAEV-LYELPTSTQWCFDIQWCPRNPAVLSAAAFDGHISIY 331
Query: 281 LV---STSNHDELPSESLVES-----PNQRANSLLNSYSDYEDSVYGLAWSSREP--WIF 330
+ S N + L ++ L S P +L + S ++P WI
Sbjct: 332 SIMGGSNDNANNLQADQLSSSFGNVDPFGTGKTLPPLQLPQQTSPQSTITPLKKPPKWIR 391
Query: 331 ----ASLSYDGRVV-VESVKP 346
AS ++ G++V ++++KP
Sbjct: 392 RPVGASFAFGGKLVTLDNIKP 412
>UNIPROTKB|F1ST66 [details] [associations]
symbol:DCAF10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000012666
OMA:DDEECTC EMBL:CU467893 EMBL:CU062410 Ensembl:ENSSSCT00000005896
Uniprot:F1ST66
Length = 560
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 180 DVNAVAATCESS-VQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235
D + + CE + V +D S ++ AH V N+ + + L T +D++ I L
Sbjct: 179 DGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNR--LFATCSDDTTIAL 236
Query: 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDG---FILSAGTDSTVNLWLVSTSNHDELP 291
WDLR L + L GHT W N EYD ++++G D V +W + D P
Sbjct: 237 WDLRKLNTKVCTLHGHTSWVK----NIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCP 291
>RGD|1304730 [details] [associations]
symbol:Dcaf10 "DDB1 and CUL4 associated factor 10" species:10116
"Rattus norvegicus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1304730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR000772
PROSITE:PS50231 EMBL:CH473962 GO:GO:0080008
GeneTree:ENSGT00390000012666 KO:K11802 OrthoDB:EOG4Z36DS CTD:79269
IPI:IPI00188612 RefSeq:NP_001101405.1 UniGene:Rn.199359
Ensembl:ENSRNOT00000016384 GeneID:313242 KEGG:rno:313242
UCSC:RGD:1304730 NextBio:665884 Uniprot:D4A8G6
Length = 563
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 180 DVNAVAATCESS-VQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235
D + + CE + V +D S ++ AH V N+ + + L T +D++ I L
Sbjct: 183 DGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNR--LFATCSDDTTIAL 240
Query: 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDG---FILSAGTDSTVNLWLVSTSNHDELP 291
WDLR L + L GHT W N EYD ++++G D V +W + D P
Sbjct: 241 WDLRKLNTKVCTLHGHTSWVK----NIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCP 295
>UNIPROTKB|F1MYV7 [details] [associations]
symbol:DCAF10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000012666
KO:K11802 OMA:DDEECTC CTD:79269 EMBL:DAAA02023236 EMBL:DAAA02023234
EMBL:DAAA02023235 IPI:IPI01003943 RefSeq:XP_002689774.1
ProteinModelPortal:F1MYV7 Ensembl:ENSBTAT00000019879 GeneID:509776
KEGG:bta:509776 NextBio:20869119 Uniprot:F1MYV7
Length = 564
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 180 DVNAVAATCESS-VQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235
D + + CE + V +D S ++ AH V N+ + + L T +D++ I L
Sbjct: 183 DGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNR--LFATCSDDTTIAL 240
Query: 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDG---FILSAGTDSTVNLWLVSTSNHDELP 291
WDLR L + L GHT W N EYD ++++G D V +W + D P
Sbjct: 241 WDLRKLNTKVCTLHGHTSWVK----NIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCP 295
>UNIPROTKB|E2RHV0 [details] [associations]
symbol:DCAF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000012666
KO:K11802 OMA:DDEECTC CTD:79269 EMBL:AAEX03007971
RefSeq:XP_538739.2 ProteinModelPortal:E2RHV0
Ensembl:ENSCAFT00000003750 GeneID:481617 KEGG:cfa:481617
NextBio:20856373 Uniprot:E2RHV0
Length = 564
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 180 DVNAVAATCESS-VQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235
D + + CE + V +D S ++ AH V N+ + + L T +D++ I L
Sbjct: 183 DGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNR--LFATCSDDTTIAL 240
Query: 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDG---FILSAGTDSTVNLWLVSTSNHDELP 291
WDLR L + L GHT W N EYD ++++G D V +W + D P
Sbjct: 241 WDLRKLNTKVCTLHGHTSWVK----NIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCP 295
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 115 (45.5 bits), Expect = 0.00054, P = 0.00054
Identities = 58/264 (21%), Positives = 110/264 (41%)
Query: 84 VFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE 143
+ S+G IWQ+ E E + A+ H G + + G H S D+
Sbjct: 70 LLSSGFDRQIYIWQVYE--------DCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKT 121
Query: 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT 203
F W D + Q + K ++ + G + + + + +++ WD R
Sbjct: 122 LAF-W--DIATGQRQRRFKGHGNFVNSVQGSRRGQQLL--CSGSDDRTIKIWDARKKHAA 176
Query: 204 NSIEHA-HVRNVDY-DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCN 261
+++E V V + DT ++ +++ ++ + +WD+R +A + L GH+ + +
Sbjct: 177 HTLESPFQVTAVCFGDTGEQ--VISGGIDNEVKIWDIRK-QAVLHHLRGHSDTITGMSLS 233
Query: 262 PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-DYEDSVYGL 320
PE D FIL+ D+T+ +W D P +P +R + + ++E ++
Sbjct: 234 PEGD-FILTNAMDNTLRVW-------DVRPY-----APGERCVKVFQGHQHNFEKNLLRC 280
Query: 321 AWSSREPWIFASLSYDGRVVVESV 344
AWS I S S D V + V
Sbjct: 281 AWSPGSDKI-TSGSADRHVYIWDV 303
>MGI|MGI:2140179 [details] [associations]
symbol:Dcaf10 "DDB1 and CUL4 associated factor 10"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:2140179 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 InterPro:IPR000772 GO:GO:0080008
GeneTree:ENSGT00390000012666 HOVERGEN:HBG055755 KO:K11802
OMA:DDEECTC OrthoDB:EOG4Z36DS CTD:79269 EMBL:AK045241 EMBL:AK076417
EMBL:AK083428 EMBL:AK165246 EMBL:AL772376 EMBL:AL772285
EMBL:BC027317 EMBL:BC085101 IPI:IPI00170055 IPI:IPI00649982
IPI:IPI00867762 IPI:IPI00867908 RefSeq:NP_694807.2
UniGene:Mm.317668 ProteinModelPortal:A2AKB9 SMR:A2AKB9
PhosphoSite:A2AKB9 PRIDE:A2AKB9 Ensembl:ENSMUST00000153803
Ensembl:ENSMUST00000155551 GeneID:242418 KEGG:mmu:242418
UCSC:uc008ssm.1 UCSC:uc008ssn.1 InParanoid:A2AKB9 NextBio:385339
Bgee:A2AKB9 CleanEx:MM_WDR32 Genevestigator:A2AKB9 Uniprot:A2AKB9
Length = 566
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 180 DVNAVAATCESS-VQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235
D + + CE + V +D S ++ AH V N+ + + L T +D++ I L
Sbjct: 186 DGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNR--LFATCSDDTTIAL 243
Query: 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDG---FILSAGTDSTVNLWLVSTSNHDELP 291
WDLR L + L GHT W N EYD ++++G D V +W + D P
Sbjct: 244 WDLRKLNTKVCTLHGHTSWVK----NIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCP 298
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 54/216 (25%), Positives = 98/216 (45%)
Query: 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172
I +L H + C+ + SS S+ ++ LW L+ + + ++S +S
Sbjct: 56 IMSLTGHTSAVGCIQFNSSEERVVAGSLSG-SLRLWDLEAAKILRTLMGHKAS-----IS 109
Query: 173 GGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE-HAH-VRNVDYDTKKKHLLVTAADE 230
+ P + + +S+++ WD+R G + H VR + + K L +A+D+
Sbjct: 110 SLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWL-ASASDD 168
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGT-DSTVNLW------LVS 283
S + LWDL K I E HT V +P + ++L++G+ D TV LW ++
Sbjct: 169 STVKLWDLIAGKM-ITEFTSHTSAVNVVQFHP--NEYLLASGSADRTVKLWDLEKFNMIG 225
Query: 284 TSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG 319
+S + S++ +P+ S L S S+ VYG
Sbjct: 226 SSEGETGVVRSVLFNPD---GSCLYSGSENTLRVYG 258
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 176 WDPHDVNAVAATCESS--VQFWDLRSMGKTNSIEHAHVRNVDYDTKKK---HLLVTAADE 230
W P V+ + +S ++FWD ++ G++ + HAH +N + K + L+TA+ +
Sbjct: 252 WHPTKGLVVSGSKDSQQPIKFWDPKT-GQSLATLHAH-KNTVMEVKLNLNGNWLLTASRD 309
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLV 282
L+D+R LK +Q GH AV +P ++G S G+D ++ W V
Sbjct: 310 HLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 176 WDPHDVNAVAATCESS--VQFWDLRSMGKTNSIEHAHVRNVDYDTKKK---HLLVTAADE 230
W P V+ + +S ++FWD ++ G++ + HAH +N + K + L+TA+ +
Sbjct: 248 WHPTKGLVVSGSKDSQQPIKFWDPKT-GQSLATLHAH-KNTVMEVKLNLNGNWLLTASRD 305
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLV 282
L+D+R LK +Q GH AV +P ++G S G+D ++ W V
Sbjct: 306 HLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 357
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 176 WDPHDVNAVAATCESS--VQFWDLRSMGKTNSIEHAHVRNVDYDTKKK---HLLVTAADE 230
W P V+ + +S ++FWD ++ G++ + HAH +N + K + L+TA+ +
Sbjct: 252 WHPTKGLVVSGSKDSQQPIKFWDPKT-GQSLATLHAH-KNTVMEVKLNLNGNWLLTASRD 309
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLV 282
L+D+R LK +Q GH AV +P ++G S G+D ++ W V
Sbjct: 310 HLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 122 (48.0 bits), Expect = 0.00057, P = 0.00056
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 176 WDPHDVNAVAATCESS--VQFWDLRSMGKTNSIEHAHVRNVDYDTKKK---HLLVTAADE 230
W P V+ + +S ++FWD ++ G++ + HAH +N + K + L+TA+ +
Sbjct: 252 WHPTKGLVVSGSKDSQQPIKFWDPKT-GQSLATLHAH-KNTVMEVKLNLNGNWLLTASRD 309
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLV 282
L+D+R LK +Q GH AV +P ++G S G+D ++ W V
Sbjct: 310 HLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 122 (48.0 bits), Expect = 0.00057, P = 0.00056
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 176 WDPHDVNAVAATCESS--VQFWDLRSMGKTNSIEHAHVRNVDYDTKKK---HLLVTAADE 230
W P V+ + +S ++FWD ++ G++ + HAH +N + K + L+TA+ +
Sbjct: 252 WHPTKGLVVSGSKDSQQPIKFWDPKT-GQSLATLHAH-KNTVMEVKLNLNGNWLLTASRD 309
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLV 282
L+D+R LK +Q GH AV +P ++G S G+D ++ W V
Sbjct: 310 HLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 122 (48.0 bits), Expect = 0.00057, P = 0.00056
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 176 WDPHDVNAVAATCESS--VQFWDLRSMGKTNSIEHAHVRNVDYDTKKK---HLLVTAADE 230
W P V+ + +S ++FWD ++ G++ + HAH +N + K + L+TA+ +
Sbjct: 252 WHPTKGLVVSGSKDSQQPIKFWDPKT-GQSLATLHAH-KNTVMEVKLNLNGNWLLTASRD 309
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLV 282
L+D+R LK +Q GH AV +P ++G S G+D ++ W V
Sbjct: 310 HLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 361
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 117 (46.2 bits), Expect = 0.00058, P = 0.00058
Identities = 42/173 (24%), Positives = 77/173 (44%)
Query: 126 VLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAV 184
+L WSS +++I + ++LW+ S Q +Q Y++ W D N +
Sbjct: 186 LLDWSS---QNVIAIPLGQTVYLWNATTSEIQRLFQVEQQDD---YITSLQWTK-DGNYL 238
Query: 185 AATCES-SVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243
A S ++Q WD+ K + H V ++L + + ++ I D+R+
Sbjct: 239 AVGTNSCTIQLWDVAHTKKVRELR-GHAGRVGALAWNDYILSSGSSDTNIFNHDVRVQNH 297
Query: 244 PIQELPGHTHWTWAVC-CNPEYDGFIL-SAGTDSTVNLWLVSTSNHDELPSES 294
+ L GH+ VC +DG L S G D+ +N+W +++ N E P+ +
Sbjct: 298 HVSTLSGHSQ---EVCGLKWSHDGGQLASGGNDNIINIWDINSENF-ETPAHT 346
Score = 117 (46.2 bits), Expect = 0.00058, P = 0.00058
Identities = 45/194 (23%), Positives = 89/194 (45%)
Query: 109 QLERIAALDAHVGKINCVLWWSSGRHD--KLVSIDEENIF-LWSLDCSNKNAQVQS-KQS 164
Q ++ L H ++ C L WS HD +L S +NI +W ++ N + +Q
Sbjct: 295 QNHHVSTLSGHSQEV-CGLKWS---HDGGQLASGGNDNIINIWDINSENFETPAHTFEQH 350
Query: 165 SGMLHYLSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGKTNSIEH-AHVRNVDYDTKK 220
+ + L AW P N +A + +++FW+ + N+++ + V ++ + T
Sbjct: 351 TAAVRAL---AWCPFQPNLLATGGGAADRTIRFWNTITGVCLNTVDTMSQVCSIQWSTTY 407
Query: 221 KHLLVTAA-DESGIHLWDL-RMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278
+ L+ + ++ + +W M+K EL GHT +P+ + ++SA D T+
Sbjct: 408 RELVSSHGYSQNQLCVWKYPSMVKCA--ELTGHTSRALHTAISPDGET-VVSASADETLR 464
Query: 279 LWLVSTSNHDELPS 292
W V ++LP+
Sbjct: 465 FWRVF-EKENKLPT 477
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 146
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 135 DKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193
D ++S ++ I +W L N + + G H++S A++ + + +++
Sbjct: 32 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 91
Query: 194 FWDLRSMGKTNS-IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD-LRMLKAPIQELPG 250
WDL + T + H V +V + + + ++ + D++ I LW+ L + K +Q+
Sbjct: 92 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQD-ES 149
Query: 251 HTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
H+ W V +P I+S G D V +W
Sbjct: 150 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 180
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 176 WDPHDVNAVAATCESSVQFWDLRSMGKTNSIE-H-AHVRNVDYDTKKKHLLVTAADESGI 233
+ PH +A+ + +V+ W GK + + H A VR+VD+ + L TA+++ I
Sbjct: 26 FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ-FLATASEDKSI 84
Query: 234 HLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLWLVSTSN 286
+W + + + L HTHW +P DG I+S D T+ +W T+N
Sbjct: 85 KVWSMYRQRF-LYSLYRHTHWVRCAKFSP--DGRLIVSCSEDKTIKIW--DTTN 133
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 166 GMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSI----EHAHVRNVDYDTKKK 221
G L +S +W P + + + +++ W++ + GK + H +V + + + K
Sbjct: 216 GHLAGISTISWSPDGATIASGSDDKTIRLWNVLT-GKAHPTPFIGHHNYVYAIAF-SPKG 273
Query: 222 HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLW 280
++LV+ + + + LWD+R + ++ LP H+ + + +DG I S TD V +W
Sbjct: 274 NMLVSGSYDEAVFLWDVRSARV-MKSLPAHSDPVSGI--DVVWDGTLIASCATDGLVRIW 330
Query: 281 LVSTSN------HDELPSESLVE-SPN 300
ST H++ P S V+ SPN
Sbjct: 331 DTSTGQCLRTLVHEDNPPVSSVKFSPN 357
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 122 (48.0 bits), Expect = 0.00063, P = 0.00063
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 176 WDPHDVNAVAATCESS--VQFWDLRSMGKTNSIEHAHVRNVDYDTKKK---HLLVTAADE 230
W P V+ + +S ++FWD ++ G++ + HAH +N + K + L+TA+ +
Sbjct: 253 WHPTKGLVVSGSKDSQQPIKFWDPKT-GQSLATLHAH-KNTVMEVKLNLNGNWLLTASRD 310
Query: 231 SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLV 282
L+D+R LK +Q GH AV +P ++G S G+D ++ W V
Sbjct: 311 HLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 362
>ZFIN|ZDB-GENE-040426-2012 [details] [associations]
symbol:wdr24 "WD repeat domain 24" species:7955
"Danio rerio" [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2012 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 EMBL:BC045501 IPI:IPI00491202 RefSeq:NP_998228.1
UniGene:Dr.79568 ProteinModelPortal:Q7ZVL2 GeneID:406336
KEGG:dre:406336 InParanoid:Q7ZVL2 NextBio:20817956
ArrayExpress:Q7ZVL2 Uniprot:Q7ZVL2
Length = 779
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 53/251 (21%), Positives = 103/251 (41%)
Query: 100 ELYGQLNSPQLERIAALDAHVGKIN--C--VLWWSSGRHDKLVSIDEENIFLWSLD--CS 153
++YG +ER+ +N C V+W + + + W+L C
Sbjct: 44 KIYGLEEDGFVERLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLSRPCR 103
Query: 154 NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS-VQFWDLRSMGKTNSI--EHAH 210
NK Q+ ++ ++ + P +VN + + + ++ +DLR ++ +
Sbjct: 104 NKQEQLFTEHK----RTVNKVCFHPTEVNMLLSGSQDGFMKCFDLRKKESVSTFSGQSES 159
Query: 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCN--PEYDGFI 268
VR+V + K + + + LWD+R + HT + CC+ PE G++
Sbjct: 160 VRDVQFSMKDYFTFAASFENGNVQLWDIRRPDRYERMFTAHTGPVF--CCDWHPEDRGWL 217
Query: 269 LSAGTDSTVNLWLVSTSNHDEL------PSESLVESPNQRANSLLNSYSDYEDSVYGLAW 322
+ G D V +W +ST+ E+ S + V+ +R L + ++Y W
Sbjct: 218 ATGGRDKMVKVWDMSTNRVKEIYCVQTFASVARVKWRPERRYHLATCSMMVDHNIY--VW 275
Query: 323 SSREPWI-FAS 332
R P+I FA+
Sbjct: 276 DVRRPFIPFAT 286
>UNIPROTKB|Q5QP82 [details] [associations]
symbol:DCAF10 "DDB1- and CUL4-associated factor 10"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 EMBL:CH471071 GO:GO:0080008 HOGENOM:HOG000006516
HOVERGEN:HBG055755 KO:K11802 OMA:DDEECTC OrthoDB:EOG4Z36DS
EMBL:AL138752 EMBL:BC003520 EMBL:BC011959 EMBL:BC108686
EMBL:BC139834 EMBL:AK026854 EMBL:AK074532 IPI:IPI00013653
IPI:IPI00410264 RefSeq:NP_077321.3 UniGene:Hs.118394
ProteinModelPortal:Q5QP82 SMR:Q5QP82 IntAct:Q5QP82 STRING:Q5QP82
PhosphoSite:Q5QP82 DMDM:74762212 PaxDb:Q5QP82 PRIDE:Q5QP82
Ensembl:ENST00000242323 Ensembl:ENST00000377724 GeneID:79269
KEGG:hsa:79269 UCSC:uc004aao.3 CTD:79269 GeneCards:GC09P037800
HGNC:HGNC:23686 HPA:HPA024160 neXtProt:NX_Q5QP82
PharmGKB:PA165585713 InParanoid:Q5QP82 ChiTaRS:DCAF10
GenomeRNAi:79269 NextBio:68226 Bgee:Q5QP82 CleanEx:HS_WDR32
Genevestigator:Q5QP82 Uniprot:Q5QP82
Length = 559
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 180 DVNAVAATCESS-VQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235
D + + CE + V +D S ++ AH V N+ + + L T +D++ I L
Sbjct: 179 DGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNR--LFATCSDDTTIAL 236
Query: 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDG---FILSAGTDSTVNLWLVSTSNHDELP 291
WDLR L + L GHT W N EYD ++++G D V +W + D P
Sbjct: 237 WDLRKLNTKVCTLHGHTSWVK----NIEYDTNTRLLVTSGFDGNVIIWDTNRYTEDGCP 291
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 117 (46.2 bits), Expect = 0.00069, P = 0.00069
Identities = 47/165 (28%), Positives = 73/165 (44%)
Query: 122 KINCVLWWSSGRHDKLVSIDEEN-IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180
KI+C+ W SS + L S D E + LW + + ++V + + DP
Sbjct: 307 KISCISW-SSYHKNLLASSDYEGTVILWD-GFTGQRSKVYQEHEKRCWS-VDFNLMDPKL 363
Query: 181 VNAVAATCESSVQFWDLRSMGKTNSIE-HAHVRNVDYDTKKK-HLLVTAADESGIHLWDL 238
+ + + ++ V+ W SIE A+V V + + HL AD +H +DL
Sbjct: 364 L--ASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHC-VHYYDL 420
Query: 239 RMLKAPIQELPGHTHW-TWAVCCNPEYDGFILSAGTDSTVNLWLV 282
R K PI GH ++A + E I+SA TDS + LW V
Sbjct: 421 RNTKQPIMVFKGHRKAVSYAKFVSGEE---IVSASTDSQLKLWNV 462
WARNING: HSPs involving 20 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 351 351 0.00078 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 270
No. of states in DFA: 623 (66 KB)
Total size of DFA: 286 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.70u 0.10s 29.80t Elapsed: 00:00:01
Total cpu time: 29.74u 0.10s 29.84t Elapsed: 00:00:01
Start: Thu May 9 22:24:09 2013 End: Thu May 9 22:24:10 2013
WARNINGS ISSUED: 2