Query 018697
Match_columns 351
No_of_seqs 544 out of 1939
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 04:40:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018697.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018697hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 7.5E-45 2.6E-49 319.0 33.2 280 16-345 108-410 (410)
2 3ow8_A WD repeat-containing pr 100.0 1.6E-44 5.3E-49 306.5 33.6 283 15-345 31-320 (321)
3 4gqb_B Methylosome protein 50; 100.0 1.9E-44 6.4E-49 308.4 33.1 293 17-346 31-331 (344)
4 4g56_B MGC81050 protein; prote 100.0 2.9E-44 1E-48 309.4 29.4 294 16-347 42-344 (357)
5 2ynn_A Coatomer subunit beta'; 100.0 2E-43 6.9E-48 297.7 32.0 250 58-348 6-261 (304)
6 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.6E-43 1.9E-47 300.2 35.1 300 18-348 18-337 (345)
7 2ynn_A Coatomer subunit beta'; 100.0 9.5E-43 3.2E-47 293.6 35.6 284 15-346 12-302 (304)
8 1got_B GT-beta; complex (GTP-b 100.0 1.1E-42 3.8E-47 297.8 36.2 282 15-343 54-340 (340)
9 3ow8_A WD repeat-containing pr 100.0 1.5E-42 5.2E-47 294.3 30.9 266 42-347 9-280 (321)
10 3iz6_a 40S ribosomal protein R 100.0 1.4E-42 5E-47 301.6 31.5 298 13-347 63-376 (380)
11 2xyi_A Probable histone-bindin 100.0 4.4E-42 1.5E-46 303.4 34.4 329 10-347 42-411 (430)
12 1vyh_C Platelet-activating fac 100.0 3.6E-42 1.2E-46 302.0 31.1 247 59-347 102-370 (410)
13 2pbi_B Guanine nucleotide-bind 100.0 4.7E-41 1.6E-45 289.1 37.3 286 14-343 62-354 (354)
14 1erj_A Transcriptional repress 100.0 2.7E-41 9.1E-46 294.9 33.5 282 18-349 66-392 (393)
15 4ery_A WD repeat-containing pr 100.0 7.6E-41 2.6E-45 283.1 34.7 288 9-345 16-311 (312)
16 2hes_X YDR267CP; beta-propelle 100.0 6E-41 2E-45 285.8 33.9 297 11-346 9-328 (330)
17 2xzm_R RACK1; ribosome, transl 100.0 2.8E-40 9.6E-45 283.3 37.8 298 15-346 20-340 (343)
18 4gqb_B Methylosome protein 50; 100.0 7.2E-42 2.5E-46 292.4 26.7 255 63-346 28-289 (344)
19 3frx_A Guanine nucleotide-bind 100.0 2.5E-40 8.6E-45 280.6 35.6 286 11-346 12-317 (319)
20 4g56_B MGC81050 protein; prote 100.0 3.1E-41 1.1E-45 290.5 27.3 256 62-346 39-301 (357)
21 1got_B GT-beta; complex (GTP-b 100.0 2.6E-40 9.1E-45 283.1 32.6 249 58-346 48-301 (340)
22 2pm9_A Protein WEB1, protein t 100.0 5.8E-41 2E-45 294.9 28.1 303 16-348 12-339 (416)
23 2pm7_B Protein transport prote 100.0 7.1E-40 2.4E-44 275.1 32.8 253 60-345 4-284 (297)
24 3i2n_A WD repeat-containing pr 100.0 1.5E-39 5E-44 280.1 33.0 314 15-347 17-354 (357)
25 1nr0_A Actin interacting prote 100.0 1.9E-39 6.7E-44 298.7 35.9 296 19-346 21-355 (611)
26 2pbi_B Guanine nucleotide-bind 100.0 3.4E-39 1.2E-43 277.5 33.7 251 58-346 57-315 (354)
27 2j04_B YDR362CP, TAU91; beta p 100.0 8.2E-40 2.8E-44 293.2 30.9 328 5-346 125-517 (524)
28 3iz6_a 40S ribosomal protein R 100.0 5.1E-40 1.7E-44 285.6 28.7 257 55-346 56-329 (380)
29 2ymu_A WD-40 repeat protein; u 100.0 6.1E-39 2.1E-43 293.9 36.2 270 18-343 305-577 (577)
30 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-39 1.5E-43 276.0 32.8 267 57-346 7-283 (345)
31 1nr0_A Actin interacting prote 100.0 4E-39 1.4E-43 296.6 34.7 286 16-346 59-397 (611)
32 3dm0_A Maltose-binding peripla 100.0 8.3E-39 2.8E-43 299.0 36.2 289 13-347 379-694 (694)
33 3bg1_A Protein SEC13 homolog; 100.0 1.6E-39 5.5E-44 275.3 26.5 255 59-345 7-292 (316)
34 3frx_A Guanine nucleotide-bind 100.0 2.3E-38 7.8E-43 268.6 31.5 252 56-346 8-267 (319)
35 2hes_X YDR267CP; beta-propelle 100.0 2.5E-38 8.5E-43 269.6 30.5 259 58-346 7-280 (330)
36 3zwl_B Eukaryotic translation 100.0 1.8E-37 6.3E-42 267.9 36.4 293 8-346 24-346 (369)
37 4h5i_A Guanine nucleotide-exch 100.0 3.2E-39 1.1E-43 278.7 25.1 300 9-347 10-344 (365)
38 1gxr_A ESG1, transducin-like e 100.0 1.2E-37 4.2E-42 265.8 34.5 280 18-344 53-335 (337)
39 1sq9_A Antiviral protein SKI8; 100.0 2.4E-38 8E-43 276.7 30.3 289 15-346 15-395 (397)
40 1erj_A Transcriptional repress 100.0 5E-38 1.7E-42 274.3 31.7 257 60-347 59-342 (393)
41 3k26_A Polycomb protein EED; W 100.0 1.8E-38 6.1E-43 274.1 28.7 291 15-345 17-365 (366)
42 2ymu_A WD-40 repeat protein; u 100.0 2.3E-37 7.7E-42 283.5 36.5 273 18-346 264-539 (577)
43 4ery_A WD repeat-containing pr 100.0 6.4E-38 2.2E-42 265.2 30.3 249 57-347 15-269 (312)
44 1k8k_C P40, ARP2/3 complex 41 100.0 9.3E-38 3.2E-42 270.4 31.5 307 16-346 8-361 (372)
45 1r5m_A SIR4-interacting protei 100.0 1.1E-37 3.8E-42 274.4 32.4 305 17-345 46-424 (425)
46 4aow_A Guanine nucleotide-bind 100.0 9.1E-37 3.1E-41 260.9 36.5 296 12-346 34-337 (340)
47 2pm9_A Protein WEB1, protein t 100.0 1.2E-38 4E-43 280.2 25.0 317 18-346 69-414 (416)
48 2xzm_R RACK1; ribosome, transl 100.0 3.4E-37 1.2E-41 264.1 33.1 252 58-346 14-285 (343)
49 4gga_A P55CDC, cell division c 100.0 1E-36 3.5E-41 268.3 36.9 264 40-347 123-396 (420)
50 4e54_B DNA damage-binding prot 100.0 3E-38 1E-42 279.3 26.0 275 59-351 113-435 (435)
51 3f3f_A Nucleoporin SEH1; struc 100.0 4E-37 1.4E-41 263.5 30.5 275 59-346 5-337 (351)
52 4aez_A CDC20, WD repeat-contai 100.0 9E-37 3.1E-41 267.1 32.6 263 40-347 111-381 (401)
53 3ei3_B DNA damage-binding prot 100.0 7.5E-37 2.6E-41 266.0 31.6 280 15-346 72-382 (383)
54 3jrp_A Fusion protein of prote 100.0 7.6E-37 2.6E-41 265.1 29.4 255 59-345 5-286 (379)
55 4ggc_A P55CDC, cell division c 100.0 2.3E-35 7.8E-40 249.8 37.8 277 22-348 31-317 (318)
56 3dwl_C Actin-related protein 2 100.0 9.7E-38 3.3E-42 271.0 23.5 246 62-345 8-280 (377)
57 3dwl_C Actin-related protein 2 100.0 7.7E-38 2.6E-42 271.6 22.4 307 17-344 12-377 (377)
58 1gxr_A ESG1, transducin-like e 100.0 8.2E-36 2.8E-40 254.5 33.6 286 15-347 8-297 (337)
59 2j04_B YDR362CP, TAU91; beta p 100.0 3.6E-37 1.2E-41 276.1 26.2 256 62-346 130-428 (524)
60 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-36 5E-41 262.8 28.6 247 62-346 5-274 (372)
61 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-35 4.4E-40 250.8 32.8 282 11-348 13-298 (313)
62 1sq9_A Antiviral protein SKI8; 100.0 2.7E-36 9.4E-41 263.6 29.4 256 58-347 9-323 (397)
63 3vl1_A 26S proteasome regulato 100.0 9E-36 3.1E-40 262.3 32.3 290 23-346 104-419 (420)
64 4a11_B DNA excision repair pro 100.0 7.8E-36 2.7E-40 261.3 31.6 269 59-348 37-367 (408)
65 3vl1_A 26S proteasome regulato 100.0 1.6E-36 5.3E-41 267.1 25.7 276 21-346 61-365 (420)
66 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-35 4E-40 282.7 33.7 285 15-346 12-302 (814)
67 4aow_A Guanine nucleotide-bind 100.0 2.8E-35 9.6E-40 251.7 32.6 252 58-346 31-286 (340)
68 3zwl_B Eukaryotic translation 100.0 5.5E-35 1.9E-39 252.4 34.0 252 53-347 20-305 (369)
69 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-36 5.8E-41 265.5 24.1 275 39-346 54-342 (402)
70 3dm0_A Maltose-binding peripla 100.0 1.7E-35 5.7E-40 276.6 32.2 251 59-346 376-632 (694)
71 3i2n_A WD repeat-containing pr 100.0 2.8E-35 9.7E-40 253.2 30.6 252 55-346 8-291 (357)
72 3gre_A Serine/threonine-protei 100.0 4.7E-36 1.6E-40 265.5 26.1 307 13-343 60-437 (437)
73 1yfq_A Cell cycle arrest prote 100.0 7.9E-35 2.7E-39 249.1 32.4 277 15-343 10-321 (342)
74 3dw8_B Serine/threonine-protei 100.0 1.3E-34 4.5E-39 256.8 32.7 314 16-344 28-444 (447)
75 3ei3_B DNA damage-binding prot 100.0 5.7E-35 2E-39 254.1 29.7 248 57-346 65-339 (383)
76 3dw8_B Serine/threonine-protei 100.0 2E-35 7E-40 262.1 26.4 257 63-346 26-373 (447)
77 3jro_A Fusion protein of prote 100.0 2.4E-35 8.2E-40 277.3 27.9 256 59-346 3-285 (753)
78 3mkq_A Coatomer beta'-subunit; 100.0 6.6E-35 2.3E-39 277.5 30.1 247 58-347 6-260 (814)
79 1yfq_A Cell cycle arrest prote 100.0 1.1E-34 3.6E-39 248.4 28.2 251 61-347 7-283 (342)
80 1p22_A F-BOX/WD-repeat protein 100.0 3.5E-34 1.2E-38 253.4 32.1 277 19-347 136-415 (435)
81 2pm7_B Protein transport prote 100.0 4.6E-34 1.6E-38 239.7 30.4 250 13-284 6-285 (297)
82 3odt_A Protein DOA1; ubiquitin 100.0 4.5E-34 1.5E-38 241.3 30.5 248 52-347 5-256 (313)
83 3gre_A Serine/threonine-protei 100.0 2.3E-35 7.7E-40 261.2 23.2 283 50-348 48-361 (437)
84 1r5m_A SIR4-interacting protei 100.0 2.3E-34 7.8E-39 253.3 29.4 247 57-347 37-362 (425)
85 3v7d_B Cell division control p 100.0 6.3E-34 2.2E-38 253.8 31.7 266 29-346 133-421 (464)
86 3mmy_A MRNA export factor; mRN 100.0 9.6E-34 3.3E-38 244.5 30.6 281 15-344 38-344 (368)
87 3bg1_A Protein SEC13 homolog; 100.0 3.7E-34 1.3E-38 242.4 27.0 250 14-284 11-293 (316)
88 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-33 3.8E-38 280.5 34.0 282 16-346 615-913 (1249)
89 1pgu_A Actin interacting prote 100.0 1.4E-33 4.6E-38 260.1 31.7 282 17-346 161-614 (615)
90 3k26_A Polycomb protein EED; W 100.0 1E-34 3.4E-39 250.6 22.0 259 60-347 13-319 (366)
91 3v7d_B Cell division control p 100.0 4.3E-33 1.5E-37 248.5 29.4 242 57-347 113-382 (464)
92 3sfz_A APAF-1, apoptotic pepti 100.0 6.8E-34 2.3E-38 282.0 26.7 273 19-345 964-1248(1249)
93 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-33 6.1E-38 246.3 26.3 251 66-347 35-300 (402)
94 4h5i_A Guanine nucleotide-exch 100.0 8.7E-33 3E-37 238.5 29.5 224 40-284 102-343 (365)
95 1pgu_A Actin interacting prote 100.0 1.2E-32 4.3E-37 253.7 32.3 287 17-346 19-328 (615)
96 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.4E-32 1.9E-36 240.4 34.5 248 63-345 100-390 (450)
97 2oaj_A Protein SNI1; WD40 repe 100.0 3.8E-33 1.3E-37 266.1 28.5 306 18-346 100-605 (902)
98 3vu4_A KMHSV2; beta-propeller 100.0 1.9E-32 6.3E-37 235.6 29.4 239 60-347 14-272 (355)
99 4e54_B DNA damage-binding prot 100.0 1E-33 3.5E-38 250.3 22.1 212 111-346 110-327 (435)
100 1l0q_A Surface layer protein; 100.0 7.8E-32 2.7E-36 234.9 33.5 262 39-346 9-275 (391)
101 4aez_A CDC20, WD repeat-contai 100.0 1.4E-32 4.8E-37 240.5 28.7 238 62-346 88-336 (401)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-32 5.3E-37 243.9 29.1 240 66-344 5-337 (450)
103 4a11_B DNA excision repair pro 100.0 7.1E-32 2.4E-36 236.1 32.6 287 15-348 42-407 (408)
104 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-31 3.8E-36 229.7 32.3 259 15-284 10-337 (351)
105 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-33 8.2E-38 240.3 21.9 236 68-346 39-292 (343)
106 4gq1_A NUP37; propeller, trans 100.0 1.4E-32 4.9E-37 239.6 26.3 299 8-347 8-390 (393)
107 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-31 6.3E-36 236.6 32.8 253 39-347 176-443 (445)
108 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.3E-31 1.1E-35 235.0 34.2 258 27-346 128-391 (445)
109 2w18_A PALB2, fancn, partner a 100.0 3.1E-31 1.1E-35 219.3 31.0 268 40-345 61-356 (356)
110 3mmy_A MRNA export factor; mRN 100.0 7.6E-32 2.6E-36 232.6 28.1 252 57-347 31-305 (368)
111 3bws_A Protein LP49; two-domai 100.0 1.8E-31 6E-36 235.8 30.4 278 22-346 128-432 (433)
112 3vu4_A KMHSV2; beta-propeller 100.0 9.5E-31 3.3E-35 225.0 33.9 290 15-346 18-336 (355)
113 2oaj_A Protein SNI1; WD40 repe 100.0 5.2E-32 1.8E-36 258.3 28.2 242 59-344 11-310 (902)
114 3jrp_A Fusion protein of prote 100.0 2.2E-31 7.6E-36 230.7 27.7 250 13-284 8-287 (379)
115 3lrv_A PRE-mRNA-splicing facto 100.0 4.8E-31 1.7E-35 225.9 28.9 270 26-344 46-331 (343)
116 2j04_A TAU60, YPL007P, hypothe 100.0 4.1E-32 1.4E-36 238.5 21.6 264 17-346 16-297 (588)
117 1p22_A F-BOX/WD-repeat protein 100.0 8.8E-31 3E-35 231.6 29.5 231 62-346 130-365 (435)
118 4gga_A P55CDC, cell division c 100.0 2.6E-30 8.9E-35 227.5 31.2 245 15-284 146-395 (420)
119 3jro_A Fusion protein of prote 100.0 4.3E-31 1.5E-35 248.4 27.2 249 14-285 7-286 (753)
120 2xyi_A Probable histone-bindin 100.0 1.9E-30 6.4E-35 229.0 29.4 253 19-284 131-410 (430)
121 2j04_A TAU60, YPL007P, hypothe 100.0 5.2E-30 1.8E-34 225.3 26.4 244 63-335 83-350 (588)
122 3bws_A Protein LP49; two-domai 100.0 8.1E-29 2.8E-33 218.8 31.8 261 44-347 101-391 (433)
123 2w18_A PALB2, fancn, partner a 100.0 6E-30 2E-34 211.6 20.4 251 9-283 79-356 (356)
124 4gq1_A NUP37; propeller, trans 100.0 4.1E-29 1.4E-33 217.8 23.4 229 39-283 108-388 (393)
125 4ggc_A P55CDC, cell division c 100.0 2.6E-27 8.9E-32 200.2 31.7 245 15-284 66-315 (318)
126 1l0q_A Surface layer protein; 100.0 9.4E-28 3.2E-32 209.1 28.5 226 79-347 3-234 (391)
127 3hfq_A Uncharacterized protein 100.0 7.4E-27 2.5E-31 200.2 32.3 291 29-345 3-316 (347)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 5.1E-27 1.8E-31 205.8 29.5 276 26-346 72-387 (415)
129 1ri6_A Putative isomerase YBHE 100.0 2.1E-26 7.2E-31 196.7 28.6 277 39-345 12-307 (343)
130 3scy_A Hypothetical bacterial 100.0 5.2E-25 1.8E-29 189.8 34.3 295 25-345 10-336 (361)
131 1nir_A Nitrite reductase; hemo 99.9 8.3E-25 2.8E-29 197.5 32.9 285 21-348 183-516 (543)
132 3u4y_A Uncharacterized protein 99.9 8.5E-25 2.9E-29 186.0 30.7 274 25-346 6-304 (331)
133 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.5E-25 2.2E-29 192.4 30.7 254 28-327 143-410 (415)
134 2ojh_A Uncharacterized protein 99.9 2.5E-25 8.7E-30 185.7 26.1 253 39-336 19-292 (297)
135 1nir_A Nitrite reductase; hemo 99.9 3.2E-24 1.1E-28 193.7 31.9 286 24-347 145-459 (543)
136 3u4y_A Uncharacterized protein 99.9 7.8E-24 2.7E-28 180.1 26.1 239 71-346 3-252 (331)
137 2ecf_A Dipeptidyl peptidase IV 99.9 3.6E-24 1.2E-28 201.7 26.2 284 16-345 36-412 (741)
138 2z3z_A Dipeptidyl aminopeptida 99.9 9.2E-24 3.1E-28 197.8 28.8 284 18-346 83-435 (706)
139 3vgz_A Uncharacterized protein 99.9 3E-23 1E-27 177.9 29.2 270 21-334 45-333 (353)
140 2ojh_A Uncharacterized protein 99.9 2.1E-23 7.3E-28 174.0 26.4 223 87-346 18-258 (297)
141 1pby_B Quinohemoprotein amine 99.9 9.8E-24 3.4E-28 179.7 23.8 262 40-347 9-311 (337)
142 3vgz_A Uncharacterized protein 99.9 6.4E-23 2.2E-27 175.9 25.0 250 64-347 39-304 (353)
143 2ecf_A Dipeptidyl peptidase IV 99.9 2E-22 7E-27 189.7 28.7 281 19-345 111-458 (741)
144 1ri6_A Putative isomerase YBHE 99.9 3.2E-22 1.1E-26 170.7 27.3 248 21-283 42-307 (343)
145 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.8E-22 9.7E-27 172.9 26.5 282 29-346 3-341 (365)
146 2z3z_A Dipeptidyl aminopeptida 99.9 1.5E-22 5.1E-27 189.6 24.1 241 66-346 82-391 (706)
147 3o4h_A Acylamino-acid-releasin 99.9 7.5E-23 2.6E-27 187.4 19.7 233 65-344 21-274 (582)
148 2oit_A Nucleoporin 214KDA; NH2 99.9 6.8E-23 2.3E-27 180.2 18.2 204 120-347 36-279 (434)
149 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-22 7.2E-27 189.1 22.6 237 66-343 17-341 (723)
150 1jmx_B Amine dehydrogenase; ox 99.9 7.8E-22 2.7E-26 168.8 23.9 236 70-347 4-326 (349)
151 1xfd_A DIP, dipeptidyl aminope 99.9 2E-21 6.9E-26 182.4 27.4 285 19-336 63-431 (723)
152 2oit_A Nucleoporin 214KDA; NH2 99.9 4.2E-22 1.4E-26 175.2 20.3 210 65-284 36-278 (434)
153 1k32_A Tricorn protease; prote 99.9 1.3E-20 4.5E-25 183.5 32.8 293 18-346 54-461 (1045)
154 3o4h_A Acylamino-acid-releasin 99.9 4.5E-21 1.5E-25 175.6 25.8 275 16-346 21-315 (582)
155 3scy_A Hypothetical bacterial 99.9 1.5E-19 5E-24 155.6 31.7 251 21-284 54-337 (361)
156 1k32_A Tricorn protease; prote 99.9 5.5E-21 1.9E-25 186.2 24.5 254 40-344 222-500 (1045)
157 3hfq_A Uncharacterized protein 99.9 1E-19 3.5E-24 155.7 29.3 248 22-284 45-317 (347)
158 1z68_A Fibroblast activation p 99.9 2.2E-21 7.6E-26 182.1 16.9 234 69-346 19-346 (719)
159 1pby_B Quinohemoprotein amine 99.9 2.2E-20 7.4E-25 158.9 20.8 224 88-347 8-270 (337)
160 1jmx_B Amine dehydrogenase; ox 99.9 8.2E-19 2.8E-23 149.9 27.8 229 24-284 7-325 (349)
161 1z68_A Fibroblast activation p 99.9 2.4E-20 8.3E-25 175.0 19.6 280 21-345 20-390 (719)
162 3fvz_A Peptidyl-glycine alpha- 99.8 3E-18 1E-22 145.4 27.0 245 65-347 23-323 (329)
163 3pe7_A Oligogalacturonate lyas 99.8 3.8E-19 1.3E-23 154.5 21.8 279 22-345 41-381 (388)
164 1q7f_A NHL, brain tumor CG1071 99.8 1.7E-17 5.8E-22 137.9 27.8 239 63-348 27-282 (286)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 9.7E-18 3.3E-22 144.4 25.0 246 21-284 44-341 (365)
166 4a5s_A Dipeptidyl peptidase 4 99.8 2.3E-18 8E-23 161.9 21.0 237 66-346 17-353 (740)
167 3azo_A Aminopeptidase; POP fam 99.8 5.3E-18 1.8E-22 157.7 21.5 251 59-344 17-321 (662)
168 3azo_A Aminopeptidase; POP fam 99.8 2.9E-17 1E-21 152.7 26.4 280 18-343 25-364 (662)
169 2xdw_A Prolyl endopeptidase; a 99.8 5.3E-16 1.8E-20 145.3 34.0 250 64-346 123-414 (710)
170 3pe7_A Oligogalacturonate lyas 99.8 1.8E-17 6.1E-22 143.9 22.2 247 59-346 24-329 (388)
171 3c5m_A Oligogalacturonate lyas 99.8 1.4E-17 5E-22 144.7 20.4 277 20-345 39-381 (396)
172 2oiz_A Aromatic amine dehydrog 99.8 3E-16 1E-20 134.7 26.1 276 27-347 14-335 (361)
173 3e5z_A Putative gluconolactona 99.8 7E-16 2.4E-20 128.8 27.4 240 62-346 24-286 (296)
174 2dg1_A DRP35, lactonase; beta 99.8 3.4E-15 1.2E-19 126.8 31.6 237 59-334 38-299 (333)
175 1rwi_B Serine/threonine-protei 99.8 7.8E-16 2.7E-20 126.6 26.5 241 67-349 25-267 (270)
176 2gop_A Trilobed protease; beta 99.8 7.1E-16 2.4E-20 131.7 27.0 267 17-345 15-330 (347)
177 4a5s_A Dipeptidyl peptidase 4 99.8 2.2E-16 7.5E-21 148.5 25.6 240 21-284 21-353 (740)
178 2bkl_A Prolyl endopeptidase; m 99.8 6.8E-16 2.3E-20 144.1 27.4 285 26-346 77-397 (695)
179 2oiz_A Aromatic amine dehydrog 99.7 2.5E-15 8.5E-20 129.0 27.2 266 21-327 54-360 (361)
180 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 6E-15 2E-19 124.1 28.4 247 65-346 17-299 (314)
181 3c5m_A Oligogalacturonate lyas 99.7 2.9E-16 1E-20 136.5 19.2 236 67-346 37-329 (396)
182 3dsm_A Uncharacterized protein 99.7 5.8E-15 2E-19 125.0 24.6 238 66-345 44-301 (328)
183 2dg1_A DRP35, lactonase; beta 99.7 5.2E-15 1.8E-19 125.7 22.8 235 65-345 5-262 (333)
184 1yr2_A Prolyl oligopeptidase; 99.7 3E-14 1E-18 133.9 28.5 249 64-346 161-441 (741)
185 2z2n_A Virginiamycin B lyase; 99.7 6.4E-13 2.2E-17 110.7 33.4 275 17-346 15-295 (299)
186 3fvz_A Peptidyl-glycine alpha- 99.7 1.4E-14 4.9E-19 122.7 23.4 222 43-284 70-322 (329)
187 1q7f_A NHL, brain tumor CG1071 99.7 2.9E-14 1E-18 118.3 23.6 200 118-345 27-237 (286)
188 2z2n_A Virginiamycin B lyase; 99.7 7.8E-13 2.7E-17 110.2 31.0 239 62-345 11-254 (299)
189 3g4e_A Regucalcin; six bladed 99.7 1.1E-13 3.7E-18 115.6 25.6 233 66-336 13-263 (297)
190 2gop_A Trilobed protease; beta 99.7 3.3E-14 1.1E-18 121.3 22.8 224 66-345 15-290 (347)
191 1qks_A Cytochrome CD1 nitrite 99.7 3.2E-13 1.1E-17 121.9 30.1 292 21-348 201-540 (567)
192 1qks_A Cytochrome CD1 nitrite 99.6 4.7E-13 1.6E-17 120.8 28.5 220 87-346 173-421 (567)
193 3no2_A Uncharacterized protein 99.6 2.5E-13 8.5E-18 111.8 24.2 204 87-333 11-230 (276)
194 2xdw_A Prolyl endopeptidase; a 99.6 1.9E-13 6.4E-18 128.0 26.4 236 75-344 81-366 (710)
195 3e5z_A Putative gluconolactona 99.6 1.2E-13 4E-18 115.3 21.0 202 112-346 19-246 (296)
196 2bkl_A Prolyl endopeptidase; m 99.6 4.6E-13 1.6E-17 125.0 26.5 235 74-345 76-348 (695)
197 2qc5_A Streptogramin B lactona 99.6 1.2E-11 4.2E-16 102.9 32.1 272 20-345 23-299 (300)
198 3hrp_A Uncharacterized protein 99.6 1.2E-12 4.2E-17 113.9 26.8 237 66-345 131-409 (409)
199 2ghs_A AGR_C_1268P; regucalcin 99.6 1.6E-12 5.4E-17 109.9 26.4 226 68-336 51-293 (326)
200 2mad_H Methylamine dehydrogena 99.6 2.3E-11 7.8E-16 104.5 31.2 276 26-348 30-352 (373)
201 2qc5_A Streptogramin B lactona 99.6 2.3E-11 7.7E-16 101.3 30.6 237 64-345 18-259 (300)
202 3iuj_A Prolyl endopeptidase; h 99.6 2E-12 6.7E-17 120.6 25.6 248 63-346 126-405 (693)
203 1rwi_B Serine/threonine-protei 99.6 4.3E-12 1.5E-16 104.1 24.9 233 20-284 27-264 (270)
204 3dr2_A Exported gluconolactona 99.5 5.3E-12 1.8E-16 105.7 24.5 235 61-343 40-303 (305)
205 3dsm_A Uncharacterized protein 99.5 5.2E-12 1.8E-16 106.9 24.3 223 29-283 54-301 (328)
206 3sjl_D Methylamine dehydrogena 99.5 8.3E-12 2.8E-16 106.1 23.0 281 23-348 39-365 (386)
207 1yr2_A Prolyl oligopeptidase; 99.5 8.8E-12 3E-16 117.2 25.1 239 74-345 115-392 (741)
208 3c75_H MADH, methylamine dehyd 99.5 1.3E-11 4.3E-16 106.9 22.4 279 26-348 82-404 (426)
209 3no2_A Uncharacterized protein 99.5 7.6E-11 2.6E-15 96.9 25.8 209 39-272 12-231 (276)
210 1xip_A Nucleoporin NUP159; bet 99.5 1.1E-12 3.9E-17 111.8 14.4 174 122-332 39-230 (388)
211 2ece_A 462AA long hypothetical 99.4 5E-10 1.7E-14 96.0 29.1 231 40-284 41-352 (462)
212 1xip_A Nucleoporin NUP159; bet 99.4 1.1E-11 3.9E-16 105.7 18.0 180 67-271 39-231 (388)
213 1mda_H Methylamine dehydrogena 99.4 3.7E-11 1.3E-15 102.2 19.5 222 92-348 47-348 (368)
214 2qe8_A Uncharacterized protein 99.4 6.7E-11 2.3E-15 100.7 20.9 240 66-337 17-312 (343)
215 3g4e_A Regucalcin; six bladed 99.4 2.1E-10 7.3E-15 95.5 23.1 203 119-345 11-228 (297)
216 3iuj_A Prolyl endopeptidase; h 99.4 9E-11 3.1E-15 109.4 21.3 198 119-345 127-358 (693)
217 2mad_H Methylamine dehydrogena 99.4 3E-09 1E-13 91.3 29.2 242 21-284 70-350 (373)
218 3hrp_A Uncharacterized protein 99.3 3.1E-09 1.1E-13 92.5 29.1 192 121-345 131-353 (409)
219 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 3.9E-10 1.4E-14 94.5 21.8 205 118-345 15-255 (314)
220 3sjl_D Methylamine dehydrogena 99.3 2.6E-09 8.9E-14 90.8 25.4 264 22-325 83-384 (386)
221 1fwx_A Nitrous oxide reductase 99.3 2.2E-10 7.5E-15 101.6 17.7 239 67-334 86-407 (595)
222 1npe_A Nidogen, entactin; glyc 99.3 1.3E-08 4.4E-13 83.2 27.4 245 42-327 10-263 (267)
223 2ghs_A AGR_C_1268P; regucalcin 99.3 1.2E-09 3.9E-14 92.3 21.2 193 123-345 51-259 (326)
224 3c75_H MADH, methylamine dehyd 99.2 7.9E-09 2.7E-13 89.4 24.9 244 21-284 122-402 (426)
225 1mda_H Methylamine dehydrogena 99.2 2.5E-09 8.5E-14 91.0 20.8 242 43-324 47-366 (368)
226 2qe8_A Uncharacterized protein 99.2 1.2E-09 4.1E-14 92.9 18.8 208 121-344 17-276 (343)
227 2iwa_A Glutamine cyclotransfer 99.2 2.7E-09 9.2E-14 86.0 18.8 206 110-347 9-238 (266)
228 3dr2_A Exported gluconolactona 99.2 3.3E-09 1.1E-13 88.6 18.6 201 113-345 37-266 (305)
229 2iwa_A Glutamine cyclotransfer 99.2 9.7E-09 3.3E-13 82.7 20.3 199 62-284 15-237 (266)
230 1npe_A Nidogen, entactin; glyc 99.1 1.6E-07 5.3E-12 76.7 26.0 197 121-346 36-238 (267)
231 2ece_A 462AA long hypothetical 99.1 3.9E-08 1.3E-12 84.4 22.7 211 127-345 88-351 (462)
232 2hz6_A Endoplasmic reticulum t 99.1 5E-11 1.7E-15 102.4 4.6 174 136-346 12-192 (369)
233 2hz6_A Endoplasmic reticulum t 99.1 1.6E-10 5.4E-15 99.3 7.4 182 76-284 8-192 (369)
234 3nol_A Glutamine cyclotransfer 99.0 2E-08 7E-13 79.9 17.5 189 112-334 33-244 (262)
235 3nol_A Glutamine cyclotransfer 99.0 2.5E-08 8.5E-13 79.4 17.8 185 61-271 36-243 (262)
236 3nok_A Glutaminyl cyclase; bet 99.0 2.8E-08 9.7E-13 79.1 18.1 185 61-272 48-254 (268)
237 2fp8_A Strictosidine synthase; 99.0 2.9E-07 9.9E-12 77.4 25.0 240 66-346 19-313 (322)
238 1kb0_A Quinohemoprotein alcoho 99.0 5E-08 1.7E-12 90.4 21.5 197 125-345 247-566 (677)
239 1yiq_A Quinohemoprotein alcoho 99.0 6.4E-08 2.2E-12 89.8 21.3 186 125-334 239-537 (689)
240 3nok_A Glutaminyl cyclase; bet 99.0 6E-08 2.1E-12 77.2 17.7 188 112-334 45-254 (268)
241 1kb0_A Quinohemoprotein alcoho 99.0 2.6E-08 9E-13 92.2 18.1 233 76-346 127-507 (677)
242 3hxj_A Pyrrolo-quinoline quino 99.0 6E-08 2.1E-12 81.7 19.0 220 77-350 107-328 (330)
243 3mbr_X Glutamine cyclotransfer 98.9 2.3E-07 7.7E-12 73.3 18.8 185 62-272 15-223 (243)
244 1fwx_A Nitrous oxide reductase 98.9 1.7E-08 5.9E-13 89.6 13.8 202 130-346 99-361 (595)
245 3mbr_X Glutamine cyclotransfer 98.9 3.5E-07 1.2E-11 72.2 19.1 191 111-335 10-224 (243)
246 2p4o_A Hypothetical protein; p 98.9 5.4E-06 1.8E-10 69.1 26.6 225 66-334 32-277 (306)
247 3v64_C Agrin; beta propeller, 98.9 7.1E-06 2.4E-10 69.6 27.7 234 66-343 34-272 (349)
248 2xe4_A Oligopeptidase B; hydro 98.8 5.2E-06 1.8E-10 78.0 28.5 197 67-281 175-395 (751)
249 3q7m_A Lipoprotein YFGL, BAMB; 98.8 1.2E-06 4.2E-11 75.2 22.4 222 77-343 143-375 (376)
250 1yiq_A Quinohemoprotein alcoho 98.8 3.3E-07 1.1E-11 85.1 19.9 230 77-346 121-505 (689)
251 3v64_C Agrin; beta propeller, 98.8 1.3E-05 4.4E-10 68.0 28.2 201 64-284 71-275 (349)
252 3v65_B Low-density lipoprotein 98.8 4.8E-06 1.6E-10 71.7 25.8 231 69-343 80-315 (386)
253 3v65_B Low-density lipoprotein 98.8 5.3E-06 1.8E-10 71.5 25.6 200 65-284 115-318 (386)
254 3hxj_A Pyrrolo-quinoline quino 98.8 7.7E-08 2.6E-12 81.0 13.8 165 88-284 37-203 (330)
255 2xe4_A Oligopeptidase B; hydro 98.8 2E-06 6.8E-11 80.8 23.3 193 122-343 175-395 (751)
256 3tc9_A Hypothetical hydrolase; 98.8 5.2E-06 1.8E-10 72.5 24.5 254 67-345 138-429 (430)
257 3q7m_A Lipoprotein YFGL, BAMB; 98.7 9.1E-06 3.1E-10 69.7 24.9 223 77-346 103-337 (376)
258 3qqz_A Putative uncharacterize 98.7 2.6E-05 9E-10 62.4 25.2 205 60-282 21-251 (255)
259 1ijq_A LDL receptor, low-densi 98.7 3.1E-05 1.1E-09 64.7 26.9 221 89-344 8-236 (316)
260 1ijq_A LDL receptor, low-densi 98.7 6.5E-05 2.2E-09 62.7 27.9 222 41-284 9-238 (316)
261 4hw6_A Hypothetical protein, I 98.7 2.3E-05 7.8E-10 68.5 25.9 253 67-345 140-432 (433)
262 3qqz_A Putative uncharacterize 98.7 2.2E-05 7.6E-10 62.8 23.5 201 115-343 21-250 (255)
263 3p5b_L Low density lipoprotein 98.7 5.9E-05 2E-09 65.2 27.5 223 41-284 91-320 (400)
264 3sov_A LRP-6, low-density lipo 98.7 3.2E-05 1.1E-09 64.6 24.8 221 89-344 11-236 (318)
265 4a2l_A BT_4663, two-component 98.7 8.4E-05 2.9E-09 70.5 30.5 232 65-345 214-479 (795)
266 3kya_A Putative phosphatase; s 98.6 4.1E-05 1.4E-09 67.3 25.5 256 67-346 140-475 (496)
267 3sov_A LRP-6, low-density lipo 98.6 5.8E-05 2E-09 63.0 25.6 222 41-285 12-239 (318)
268 3p5b_L Low density lipoprotein 98.6 6E-05 2E-09 65.2 24.3 180 89-284 90-277 (400)
269 2fp8_A Strictosidine synthase; 98.5 1.4E-05 4.8E-10 67.0 19.8 198 122-345 20-268 (322)
270 2p4o_A Hypothetical protein; p 98.5 2.9E-05 9.9E-10 64.6 21.3 206 110-345 22-241 (306)
271 4a2l_A BT_4663, two-component 98.5 0.00048 1.7E-08 65.3 31.4 232 66-345 263-525 (795)
272 1kv9_A Type II quinohemoprotei 98.5 2.6E-05 8.7E-10 72.2 21.6 186 125-334 234-520 (668)
273 1k3i_A Galactose oxidase precu 98.5 2.2E-05 7.7E-10 72.6 20.7 230 67-335 244-530 (656)
274 2ism_A Putative oxidoreductase 98.4 0.0005 1.7E-08 58.3 26.8 237 65-333 30-332 (352)
275 3m0c_C LDL receptor, low-densi 98.4 0.00021 7.1E-09 67.0 26.0 223 42-284 404-632 (791)
276 1n7d_A LDL receptor, low-densi 98.4 3E-06 1E-10 78.7 13.7 202 65-284 405-614 (699)
277 2p9w_A MAL S 1 allergenic prot 98.4 0.00018 6E-09 59.4 21.6 161 120-284 12-215 (334)
278 3m0c_C LDL receptor, low-densi 98.4 0.00031 1.1E-08 65.9 26.1 180 89-284 402-589 (791)
279 2ad6_A Methanol dehydrogenase 98.4 3.9E-05 1.3E-09 69.5 19.4 75 174-249 240-343 (571)
280 1kv9_A Type II quinohemoprotei 98.4 2.3E-05 7.8E-10 72.6 18.0 152 77-246 117-338 (668)
281 4a0p_A LRP6, LRP-6, low-densit 98.3 0.001 3.6E-08 60.8 28.0 222 41-285 14-238 (628)
282 3v9f_A Two-component system se 98.3 0.00095 3.2E-08 63.1 27.9 236 66-345 258-523 (781)
283 1w6s_A Methanol dehydrogenase 98.3 0.00024 8.3E-09 64.5 22.7 75 174-249 246-350 (599)
284 3tc9_A Hypothetical hydrolase; 98.3 3.9E-05 1.3E-09 67.0 16.9 154 170-345 138-300 (430)
285 2ad6_A Methanol dehydrogenase 98.3 0.00013 4.5E-09 66.1 20.4 167 144-334 273-526 (571)
286 2xbg_A YCF48-like protein; pho 98.3 0.001 3.5E-08 55.7 24.2 234 65-344 79-320 (327)
287 2xzh_A Clathrin heavy chain 1; 98.2 0.0013 4.3E-08 53.9 30.2 272 27-345 34-331 (365)
288 3v9f_A Two-component system se 98.2 0.0016 5.4E-08 61.6 27.6 234 66-345 313-567 (781)
289 1n7d_A LDL receptor, low-densi 98.2 1.1E-05 3.9E-10 74.9 12.6 158 121-284 406-571 (699)
290 1k3i_A Galactose oxidase precu 98.2 7.2E-05 2.5E-09 69.2 17.1 220 92-346 220-497 (656)
291 4hw6_A Hypothetical protein, I 98.2 0.002 6.9E-08 56.2 25.4 237 21-283 143-432 (433)
292 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0029 1E-07 57.9 27.1 217 89-344 13-235 (628)
293 3amr_A 3-phytase; beta-propell 98.1 0.0005 1.7E-08 57.2 19.3 191 76-283 39-262 (355)
294 1flg_A Protein (quinoprotein e 98.1 0.00034 1.2E-08 63.6 20.1 168 143-334 291-548 (582)
295 1w6s_A Methanol dehydrogenase 98.1 0.0012 4.1E-08 60.0 22.8 167 143-333 278-534 (599)
296 3s94_A LRP-6, low-density lipo 98.1 0.0027 9.1E-08 58.1 24.7 224 40-285 16-244 (619)
297 3kya_A Putative phosphatase; s 98.1 0.00095 3.3E-08 58.7 20.7 158 122-283 140-340 (496)
298 3s94_A LRP-6, low-density lipo 98.0 0.0017 5.6E-08 59.5 22.8 181 89-284 16-202 (619)
299 1bpo_A Protein (clathrin); cla 98.0 0.0047 1.6E-07 52.7 31.5 271 28-345 34-330 (494)
300 3a9g_A Putative uncharacterize 98.0 0.0047 1.6E-07 52.3 27.1 235 65-334 28-330 (354)
301 1flg_A Protein (quinoprotein e 98.0 0.0011 3.8E-08 60.2 20.4 76 173-249 250-363 (582)
302 3amr_A 3-phytase; beta-propell 97.9 0.0027 9.3E-08 52.9 19.6 204 24-249 36-272 (355)
303 2p9w_A MAL S 1 allergenic prot 97.9 0.00081 2.8E-08 55.5 16.1 153 170-346 14-215 (334)
304 3sre_A PON1, serum paraoxonase 97.9 0.0048 1.7E-07 51.9 21.0 190 122-336 51-287 (355)
305 2g8s_A Glucose/sorbosone dehyd 97.9 0.0089 3E-07 50.6 24.9 243 66-344 18-350 (353)
306 3sre_A PON1, serum paraoxonase 97.9 0.0052 1.8E-07 51.7 21.0 182 89-281 81-295 (355)
307 1xi4_A Clathrin heavy chain; a 97.8 0.014 4.9E-07 57.3 25.0 271 26-343 32-328 (1630)
308 2xzh_A Clathrin heavy chain 1; 97.6 0.02 7E-07 47.0 24.9 234 79-347 37-291 (365)
309 2ism_A Putative oxidoreductase 97.6 0.014 5E-07 49.2 19.5 144 121-272 31-221 (352)
310 3a9g_A Putative uncharacterize 97.6 0.018 6.3E-07 48.6 19.9 143 120-271 28-215 (354)
311 3pbp_A Nucleoporin NUP82; beta 97.5 0.019 6.6E-07 49.0 18.7 151 39-195 38-208 (452)
312 1tl2_A L10, protein (tachylect 97.5 0.019 6.7E-07 44.2 16.9 101 170-278 42-157 (236)
313 1bpo_A Protein (clathrin); cla 97.3 0.067 2.3E-06 45.8 24.5 234 79-347 36-290 (494)
314 3das_A Putative oxidoreductase 97.2 0.068 2.3E-06 44.8 28.2 240 64-333 30-325 (347)
315 3pbp_A Nucleoporin NUP82; beta 97.1 0.12 4E-06 44.3 20.2 146 129-280 29-208 (452)
316 1cru_A Protein (soluble quinop 97.0 0.16 5.6E-06 44.4 27.0 112 65-187 26-162 (454)
317 2xbg_A YCF48-like protein; pho 97.0 0.13 4.3E-06 42.9 24.0 188 120-342 35-230 (327)
318 1tl2_A L10, protein (tachylect 96.9 0.097 3.3E-06 40.4 16.0 149 121-283 41-207 (236)
319 2vpj_A Kelch-like protein 12; 96.9 0.14 4.9E-06 41.8 18.7 139 135-284 65-231 (301)
320 2g8s_A Glucose/sorbosone dehyd 96.8 0.079 2.7E-06 44.7 16.0 102 170-272 19-148 (353)
321 1cru_A Protein (soluble quinop 96.6 0.27 9.3E-06 43.0 18.6 102 170-272 28-162 (454)
322 3ii7_A Kelch-like protein 7; p 96.6 0.24 8.4E-06 40.5 19.5 138 135-284 58-225 (306)
323 3s25_A Hypothetical 7-bladed b 96.5 0.058 2E-06 44.4 12.9 137 129-284 22-176 (302)
324 2xn4_A Kelch-like protein 2; s 96.5 0.22 7.6E-06 40.7 16.6 137 135-284 64-229 (302)
325 3ei3_A DNA damage-binding prot 96.3 0.94 3.2E-05 44.7 30.3 132 142-284 863-999 (1158)
326 3ei3_A DNA damage-binding prot 96.3 0.97 3.3E-05 44.6 31.4 212 41-272 531-755 (1158)
327 3s25_A Hypothetical 7-bladed b 96.2 0.39 1.3E-05 39.4 17.5 139 126-283 58-215 (302)
328 1xi4_A Clathrin heavy chain; a 96.0 0.88 3E-05 45.3 19.5 234 79-347 36-290 (1630)
329 2wg3_C Hedgehog-interacting pr 95.8 0.86 2.9E-05 39.9 26.9 112 66-187 14-157 (463)
330 3sbq_A Nitrous-oxide reductase 95.8 0.13 4.5E-06 45.5 12.0 72 211-284 325-408 (638)
331 1zgk_A Kelch-like ECH-associat 95.3 0.99 3.4E-05 36.9 19.8 98 179-284 121-240 (308)
332 4asc_A Kelch repeat and BTB do 95.2 1.1 3.6E-05 36.9 17.8 98 179-284 98-221 (315)
333 3das_A Putative oxidoreductase 95.0 1.3 4.5E-05 37.0 22.6 152 113-270 24-218 (347)
334 2vpj_A Kelch-like protein 12; 94.9 1.2 4.2E-05 36.1 16.8 138 134-284 114-278 (301)
335 3ott_A Two-component system se 94.8 2.7 9.3E-05 39.4 26.9 225 65-345 21-259 (758)
336 2be1_A Serine/threonine-protei 94.6 0.1 3.5E-06 43.5 7.3 108 136-249 13-138 (339)
337 2xn4_A Kelch-like protein 2; s 94.5 1.6 5.6E-05 35.4 19.9 99 179-284 155-276 (302)
338 3ott_A Two-component system se 92.7 6.6 0.00023 36.7 25.3 190 66-284 63-260 (758)
339 4asc_A Kelch repeat and BTB do 92.5 3.7 0.00013 33.5 18.1 59 179-240 148-221 (315)
340 2woz_A Kelch repeat and BTB do 92.4 3.9 0.00013 33.4 19.1 100 179-284 109-231 (318)
341 2uvk_A YJHT; unknown function, 91.9 3.3 0.00011 34.5 12.7 91 135-230 22-128 (357)
342 3sbq_A Nitrous-oxide reductase 91.6 0.27 9.1E-06 43.6 5.5 118 64-187 321-453 (638)
343 2zwa_A Leucine carboxyl methyl 91.4 9 0.00031 35.5 16.5 148 133-284 398-577 (695)
344 4hvt_A Ritya.17583.B, post-pro 90.4 11 0.00038 35.0 22.9 201 69-284 132-381 (711)
345 1zgk_A Kelch-like ECH-associat 90.1 6.6 0.00023 31.9 20.4 137 135-284 124-287 (308)
346 2uvk_A YJHT; unknown function, 89.5 8.2 0.00028 32.0 15.4 47 190-238 168-224 (357)
347 2woz_A Kelch repeat and BTB do 89.3 7.8 0.00027 31.6 17.0 59 179-240 158-231 (318)
348 2wg3_C Hedgehog-interacting pr 89.0 11 0.00038 32.9 13.9 107 121-229 14-158 (463)
349 2zwa_A Leucine carboxyl methyl 88.7 15 0.00051 34.0 16.8 139 92-240 469-635 (695)
350 3ii7_A Kelch-like protein 7; p 88.1 9.1 0.00031 30.9 20.7 171 91-284 70-272 (306)
351 3qhy_B Beta-lactamase inhibito 87.8 9.4 0.00032 30.7 20.5 220 67-346 25-246 (282)
352 2be1_A Serine/threonine-protei 87.4 0.6 2.1E-05 38.9 4.4 102 181-285 11-131 (339)
353 3q6k_A 43.2 kDa salivary prote 81.7 23 0.00078 29.9 16.0 141 191-346 124-306 (381)
354 3qhy_B Beta-lactamase inhibito 80.5 21 0.00071 28.7 19.2 181 122-346 25-207 (282)
355 1sqj_A OXG-RCBH, oligoxylogluc 78.3 46 0.0016 31.4 22.5 155 65-230 14-190 (789)
356 3b7f_A Glycosyl hydrolase, BNR 75.9 35 0.0012 28.7 30.2 144 122-271 116-296 (394)
357 4gq2_M Nucleoporin NUP120; bet 73.7 9.8 0.00034 36.8 8.0 38 170-207 237-274 (950)
358 3no0_A DNA gyrase subunit A; D 65.4 50 0.0017 26.3 18.1 112 170-284 69-196 (276)
359 3q6k_A 43.2 kDa salivary prote 63.7 67 0.0023 27.1 20.2 167 92-271 124-341 (381)
360 3uc1_A DNA gyrase subunit A; D 55.6 85 0.0029 25.8 23.4 161 120-284 94-279 (327)
361 3zwu_A Alkaline phosphatase PH 54.1 45 0.0016 30.1 7.9 29 304-332 519-548 (592)
362 4fhn_B Nucleoporin NUP120; pro 52.9 9 0.00031 37.9 3.5 38 170-207 239-276 (1139)
363 4a9v_A PHOX; hydrolase, beta-p 49.4 72 0.0025 28.7 8.2 61 254-334 477-550 (592)
364 3zwu_A Alkaline phosphatase PH 43.9 55 0.0019 29.6 6.8 57 170-226 477-548 (592)
365 3f7f_A Nucleoporin NUP120; nuc 42.9 25 0.00087 32.5 4.5 35 171-207 224-258 (729)
366 1sqj_A OXG-RCBH, oligoxylogluc 42.1 2.2E+02 0.0077 26.7 19.4 151 120-274 14-190 (789)
367 4a9v_A PHOX; hydrolase, beta-p 41.9 1.5E+02 0.005 26.8 9.0 58 211-271 478-548 (592)
368 4gq2_M Nucleoporin NUP120; bet 41.9 2.5E+02 0.0085 27.2 22.2 37 211-249 238-274 (950)
369 3b7f_A Glycosyl hydrolase, BNR 41.8 1.5E+02 0.0052 24.7 26.9 154 121-278 177-366 (394)
370 4fhn_B Nucleoporin NUP120; pro 41.1 21 0.00073 35.3 4.0 31 254-285 239-269 (1139)
371 3no0_A DNA gyrase subunit A; D 38.5 1.5E+02 0.0051 23.6 20.7 160 120-284 67-246 (276)
372 3uc1_A DNA gyrase subunit A; D 37.0 1.7E+02 0.0059 23.9 20.7 103 179-284 108-228 (327)
373 4hvt_A Ritya.17583.B, post-pro 36.0 2.7E+02 0.0092 25.8 24.3 93 188-283 318-429 (711)
374 3f7f_A Nucleoporin NUP120; nuc 35.6 51 0.0017 30.5 5.2 31 253-286 222-252 (729)
375 2cn3_A Xyloglucanase, beta-1,4 34.8 2.8E+02 0.0096 25.7 20.2 107 121-229 23-152 (737)
376 2cn3_A Xyloglucanase, beta-1,4 28.4 3.6E+02 0.012 25.0 25.5 112 66-187 23-151 (737)
377 1q47_A Semaphorin 3A; beta pro 27.3 2.1E+02 0.0071 25.2 7.6 56 223-279 423-487 (495)
378 3a0f_A Xyloglucanase; beta-pro 23.1 4.6E+02 0.016 24.4 22.1 153 119-275 19-203 (763)
379 3kci_A Probable E3 ubiquitin-p 21.4 3.6E+02 0.012 22.5 20.1 197 132-342 61-289 (389)
380 3al9_A Plexin-A2; beta-propell 20.5 2.5E+02 0.0085 25.0 6.8 56 223-279 415-476 (539)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.5e-45 Score=318.97 Aligned_cols=280 Identities=16% Similarity=0.298 Sum_probs=243.6
Q ss_pred eeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEE
Q 018697 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAI 95 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~v 95 (351)
...+..+.++|+...++.|+ .++.|.+|++..... ...+.+|.+.|.+++|+|+++.|+++ +.|++|++
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s----~Dg~i~vwd~~~~~~---~~~l~~h~~~V~~v~~~~~~~~l~sg----s~D~~i~i 176 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSAS----EDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASC----SADMTIKL 176 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEE----SSSCEEEEETTTCCC---CEEECCCSSCEEEEEECTTSSEEEEE----ETTSCCCE
T ss_pred CCcEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCcE---EEEEeccCCcEEEEEEcCCCCEEEEE----eCCCeEEE
Confidence 44566777888887777764 588999999876432 35677899999999999999888775 79999999
Q ss_pred EEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeE
Q 018697 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGA 175 (351)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 175 (351)
||+. ..+.+..+.+|...|.+++|+|++.. +++++.|++|++||+.++..... ..+|...+.++.
T Consensus 177 wd~~---------~~~~~~~~~~h~~~V~~v~~~p~~~~-l~s~s~D~~i~~wd~~~~~~~~~-----~~~h~~~v~~~~ 241 (410)
T 1vyh_C 177 WDFQ---------GFECIRTMHGHDHNVSSVSIMPNGDH-IVSASRDKTIKMWEVQTGYCVKT-----FTGHREWVRMVR 241 (410)
T ss_dssp EETT---------SSCEEECCCCCSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEE-----EECCSSCEEEEE
T ss_pred EeCC---------CCceeEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcEEEE-----EeCCCccEEEEE
Confidence 9998 66788889999999999999999984 67778999999999987543322 235777899999
Q ss_pred ECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCC--------------------CCcEEEEecCCCe
Q 018697 176 WDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTK--------------------KKHLLVTAADESG 232 (351)
Q Consensus 176 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~--------------------~~~~l~~~~~dg~ 232 (351)
|+|++..+++++.|+.|++||+++++....+. .| |.+++|+|+ +. ++++|+.|+.
T Consensus 242 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~ 319 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKT 319 (410)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCe
Confidence 99999999999999999999999988777765 34 999999997 44 7999999999
Q ss_pred EEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc
Q 018697 233 IHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD 312 (351)
Q Consensus 233 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (351)
|++||+++ +.++..+.+|...|.+++|+|++ .+|++++.|+.|++||+.. ++++..+.+
T Consensus 320 i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~-------------------~~~~~~~~~ 378 (410)
T 1vyh_C 320 IKMWDVST-GMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKN-------------------KRCMKTLNA 378 (410)
T ss_dssp EEEEETTT-TEEEEEEECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTT-------------------SCCCEEEEC
T ss_pred EEEEECCC-CceEEEEECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC-------------------CceEEEEcC
Confidence 99999997 77889999999999999999999 9999999999999999988 888999999
Q ss_pred ccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 313 YEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 313 ~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
|...|++++|+|+++ +|++++.|+.|++|+++
T Consensus 379 h~~~v~~l~~~~~~~-~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 379 HEHFVTSLDFHKTAP-YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CSSCEEEEEECSSSS-CEEEEETTSEEEEEC--
T ss_pred CCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCC
Confidence 999999999999998 89999999999999963
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-44 Score=306.54 Aligned_cols=283 Identities=16% Similarity=0.289 Sum_probs=240.9
Q ss_pred ceeEeeeecCCCC----cceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCc
Q 018697 15 QARCISDVKADTD----HTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGES 90 (351)
Q Consensus 15 ~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d 90 (351)
....|..+.+.++ ...++.|+ .++.+++|++..... .....+.+|...|.+++|+|++..++++ +.|
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs----~D~~v~vW~~~~~~~-~~~~~l~gh~~~v~~~~~~~~~~~l~s~----s~D 101 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGS----LDDLVKVWKWRDERL-DLQWSLEGHQLGVVSVDISHTLPIAASS----SLD 101 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEE----TTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECSSSSEEEEE----ETT
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEc----CCCCEEEEECCCCCe-eeeeeeccCCCCEEEEEECCCCCEEEEE----eCC
Confidence 3445555665543 34566554 689999999876432 2334578999999999999999888775 799
Q ss_pred ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccc
Q 018697 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (351)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 170 (351)
++|++||+. ..+.+..+..|...+.+++|+|+++. +++++.|+.|++|++.++.....+ ..+...
T Consensus 102 ~~i~lWd~~---------~~~~~~~~~~~~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~~~~~~~-----~~~~~~ 166 (321)
T 3ow8_A 102 AHIRLWDLE---------NGKQIKSIDAGPVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESGKKEYSL-----DTRGKF 166 (321)
T ss_dssp SEEEEEETT---------TTEEEEEEECCTTCCCCEEECTTSSE-EEEECTTSEEEEEETTTCSEEEEE-----ECSSSC
T ss_pred CcEEEEECC---------CCCEEEEEeCCCccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCCceeEEe-----cCCCce
Confidence 999999998 67888888899999999999999994 667788999999999875443222 234558
Q ss_pred eeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeE
Q 018697 171 LSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE 247 (351)
Q Consensus 171 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 247 (351)
+.+++|+|++++|++++.|+.|++||+++++.+..+. +| |.+++|+|+++ +|++|+.|+.|++||++. ...+..
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~-~~~~~~ 243 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQH-ANLAGT 243 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTT-CCEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-ccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCC-cceeEE
Confidence 9999999999999999999999999999988877776 44 99999999998 899999999999999997 667888
Q ss_pred eeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCC
Q 018697 248 LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREP 327 (351)
Q Consensus 248 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 327 (351)
+.+|...|.+++|+|++ .+|++++.|++|++||+++ ++++.++.+|...|++++|+|+++
T Consensus 244 ~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~-------------------~~~~~~~~~h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 244 LSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGT-------------------RTCVHTFFDHQDQVWGVKYNGNGS 303 (321)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT-------------------TEEEEEECCCSSCEEEEEECTTSS
T ss_pred EcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCC-------------------CEEEEEEcCCCCcEEEEEECCCCC
Confidence 99999999999999999 9999999999999999998 889999999999999999999998
Q ss_pred ceEEEeeeCCeEEEeecC
Q 018697 328 WIFASLSYDGRVVVESVK 345 (351)
Q Consensus 328 ~~l~s~~~dg~v~vw~~~ 345 (351)
+|++++.|+.|++||++
T Consensus 304 -~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 304 -KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp -EEEEEETTCCEEEEECC
T ss_pred -EEEEEeCCCeEEEEeCC
Confidence 89999999999999974
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=308.40 Aligned_cols=293 Identities=15% Similarity=0.196 Sum_probs=223.6
Q ss_pred eEeeeecCCCCcceEEEeeeeeC--CCCEEEEEEeCCCC-CeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceE
Q 018697 17 RCISDVKADTDHTSFLTGTLSLK--EENEVHLLRLSSGG-TELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGA 93 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~--~~~~i~~~~~~~~~-~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i 93 (351)
+.+..+.+++++..++.++.... -+..+..+.-.... ..........|+..|.+++|+|++ .|+++ +.|++|
T Consensus 31 ~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~----s~dg~v 105 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVA----SDSGAV 105 (344)
T ss_dssp SEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEE----ETTSEE
T ss_pred CCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEE----ECCCEE
Confidence 45778888999887765541100 01222222211100 011112234577889999999985 56654 689999
Q ss_pred EEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceee
Q 018697 94 AIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSG 173 (351)
Q Consensus 94 ~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 173 (351)
+|||+... .........+.+|.+.|++++|+|+++. +++++.|++|++||+.++.... ...+|...|.+
T Consensus 106 ~lWd~~~~-----~~~~~~~~~~~~H~~~V~~v~~spdg~~-l~sgs~d~~i~iwd~~~~~~~~-----~~~~h~~~V~~ 174 (344)
T 4gqb_B 106 ELWELDEN-----ETLIVSKFCKYEHDDIVSTVSVLSSGTQ-AVSGSKDICIKVWDLAQQVVLS-----SYRAHAAQVTC 174 (344)
T ss_dssp EEEEECTT-----SSCEEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEE-----EECCCSSCEEE
T ss_pred EEEeccCC-----CceeEeeccccCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEE-----EEcCcCCceEE
Confidence 99999821 0011222345689999999999999984 6677899999999998653322 23467889999
Q ss_pred eEECCCCC-cEEEeecCCeEEEEEcccCCcCceeecc---e-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe
Q 018697 174 GAWDPHDV-NAVAATCESSVQFWDLRSMGKTNSIEHA---H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL 248 (351)
Q Consensus 174 ~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 248 (351)
++|+|++. .+++++.|+.|++||+++++....+... + +.+++|+|++..++++|+.|+.|++||+++ .+++..+
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-~~~~~~~ 253 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS-TSCVLSS 253 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEE
T ss_pred EEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-CcEEEEE
Confidence 99999986 4678899999999999999877766422 2 899999998776899999999999999997 6789999
Q ss_pred eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCc
Q 018697 249 PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPW 328 (351)
Q Consensus 249 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 328 (351)
.+|...|++++|+|++..+|++|+.|++|+|||++. +++ ..+.+|...|++++|+|+++.
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~-------------------~~~-~~~~~H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL-------------------SEL-FRSQAHRDFVRDATWSPLNHS 313 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC-------------------CEE-EEECCCSSCEEEEEECSSSTT
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC-------------------CcE-EEEcCCCCCEEEEEEeCCCCe
Confidence 999999999999999867899999999999999987 554 456799999999999999987
Q ss_pred eEEEeeeCCeEEEeecCc
Q 018697 329 IFASLSYDGRVVVESVKP 346 (351)
Q Consensus 329 ~l~s~~~dg~v~vw~~~~ 346 (351)
+|++++.|++|++|++++
T Consensus 314 llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEEEETTSCEEEEECCC
T ss_pred EEEEEcCCCeEEEEECCC
Confidence 889999999999999975
No 4
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.9e-44 Score=309.37 Aligned_cols=294 Identities=15% Similarity=0.201 Sum_probs=227.6
Q ss_pred eeEeeeecCCCCcceEEEeeeeeC--CCCEEEEEEeCCCCC-eEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcce
Q 018697 16 ARCISDVKADTDHTSFLTGTLSLK--EENEVHLLRLSSGGT-ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG 92 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~--~~~~i~~~~~~~~~~-~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~ 92 (351)
.+.|..+.++|++..++.|+.... -++.+++|+...... ........+|...|.+++|+|++..+ ++ +.|++
T Consensus 42 ~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~----s~dg~ 116 (357)
T 4g56_B 42 EVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VA----SDSGA 116 (357)
T ss_dssp CSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EE----ETTSC
T ss_pred cCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EE----ECCCE
Confidence 456888999999998888753111 156777776554321 11223456799999999999987554 43 57899
Q ss_pred EEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccccee
Q 018697 93 AAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172 (351)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~ 172 (351)
|+|||+..... .........+|...|++++|+|+++. +++++.|+.|++||+.++.... ...+|...|.
T Consensus 117 v~lWd~~~~~~-----~~~~~~~~~~h~~~V~~v~~spdg~~-l~sgs~dg~v~iwd~~~~~~~~-----~~~~h~~~v~ 185 (357)
T 4g56_B 117 VELWEILEKES-----LLVNKFAKYEHDDIVKTLSVFSDGTQ-AVSGGKDFSVKVWDLSQKAVLK-----SYNAHSSEVN 185 (357)
T ss_dssp EEEC-------------CCCCEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTTEEEE-----EECCCSSCEE
T ss_pred EEEeeccccce-----eEEEeeccCCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEE-----EEcCCCCCEE
Confidence 99999873100 01112334589999999999999984 6677899999999998643322 2235777999
Q ss_pred eeEECCCCC-cEEEeecCCeEEEEEcccCCcCceeecc-e---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeE
Q 018697 173 GGAWDPHDV-NAVAATCESSVQFWDLRSMGKTNSIEHA-H---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE 247 (351)
Q Consensus 173 ~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 247 (351)
+++|+|+++ .+++++.|+.|++||+++++....+... + +.+++|+|++..+|++|+.|+.|++||+++ .+++..
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~ 264 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQT 264 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCEE
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-CcEeEE
Confidence 999999886 6778899999999999998876655422 2 999999999777899999999999999997 668899
Q ss_pred eeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCC-CC
Q 018697 248 LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS-RE 326 (351)
Q Consensus 248 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 326 (351)
+.+|...|++++|+|++..+|++++.|++|+|||++. ++++..+ +|...|++++|+| ++
T Consensus 265 ~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-------------------~~~~~~~-~H~~~V~~vafsP~d~ 324 (357)
T 4g56_B 265 SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-------------------SEVFRDL-SHRDFVTGVAWSPLDH 324 (357)
T ss_dssp ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-------------------CEEEEEC-CCSSCEEEEEECSSST
T ss_pred EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-------------------CcEeEEC-CCCCCEEEEEEeCCCC
Confidence 9999999999999999867899999999999999998 6666554 7999999999999 56
Q ss_pred CceEEEeeeCCeEEEeecCcc
Q 018697 327 PWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 327 ~~~l~s~~~dg~v~vw~~~~~ 347 (351)
. +|++++.||.|++|+++..
T Consensus 325 ~-~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 325 S-KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp T-EEEEEETTSCEEEEECC--
T ss_pred C-EEEEEcCCCeEEEEECCCC
Confidence 6 8999999999999999754
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2e-43 Score=297.69 Aligned_cols=250 Identities=15% Similarity=0.231 Sum_probs=214.9
Q ss_pred EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEE
Q 018697 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 58 ~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 137 (351)
.+.+.+|.+.|.+++|+|+++.|+++ +.|+.|++||+. +...+..+..|..+|.+++|+|+++. ++
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~----~~dg~v~lWd~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~-l~ 71 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTT----LYSGRVELWNYE---------TQVEVRSIQVTETPVRAGKFIARKNW-II 71 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEE----ETTSEEEEEETT---------TTEEEEEEECCSSCEEEEEEEGGGTE-EE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEE----cCCCcEEEEECC---------CCceeEEeeccCCcEEEEEEeCCCCE-EE
Confidence 35677899999999999999998885 689999999998 66788899999999999999999984 77
Q ss_pred EEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEE
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~ 214 (351)
+++.|+.|++||+.++..... ..+|...|.+++|+|++++|++++.|+.|++||++++........+| |.++
T Consensus 72 s~s~d~~i~vwd~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v 146 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTGEKVVD-----FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (304)
T ss_dssp EEETTSEEEEEETTTCCEEEE-----EECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEE
T ss_pred EECCCCEEEEEECCCCcEEEE-----EeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEE
Confidence 778999999999987654332 23577799999999999999999999999999999875544333355 9999
Q ss_pred EcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-eCCCCceeEEEecC--CCCCeEEEeeCCCeEEEEEcCCCCCCCCC
Q 018697 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNP--EYDGFILSAGTDSTVNLWLVSTSNHDELP 291 (351)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 291 (351)
+|+|.+..+|++|+.|++|++||++... +...+ ..|...+..+.|+| ++ .+|++++.|++|++||++.
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~------- 217 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQST-PNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQT------- 217 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSS-CSEEEECCCTTCEEEEEECCSTTC-CEEEEEETTSEEEEEETTT-------
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCC-ccceeccCCcCcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCC-------
Confidence 9999544489999999999999998744 44444 46678899999987 55 7999999999999999998
Q ss_pred CcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCccc
Q 018697 292 SESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFL 348 (351)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~ 348 (351)
++++.++.+|...|.+++|+|+++ +|++++.||.|++||+.+..
T Consensus 218 ------------~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 218 ------------KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp ------------TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCC
T ss_pred ------------CccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCCc
Confidence 889999999999999999999998 89999999999999987643
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-43 Score=300.23 Aligned_cols=300 Identities=15% Similarity=0.247 Sum_probs=233.4
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEE
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQ 97 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~ 97 (351)
.+..+.++|++..++.|. .++.|++|++.............+|...|.+++|+|+++.|+++ +.|+++++|+
T Consensus 18 ~v~~l~~sp~g~~las~~----~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~----s~D~~v~iw~ 89 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCG----GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA----SFDATTCIWK 89 (345)
T ss_dssp CEEEEEECTTSSCEEEEE----TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE----ETTSCEEEEE
T ss_pred cEEEEEECCCCCEEEEEc----CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE----ECCCcEEEEE
Confidence 566778889998888774 68999999987653222223346899999999999999988885 7999999999
Q ss_pred cccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEEC
Q 018697 98 IPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD 177 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 177 (351)
+.. ...+.+..+.+|...|.+++|+|+++. +++++.|+.|++||+.+...... .....+|...|.+++|+
T Consensus 90 ~~~-------~~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~--~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 90 KNQ-------DDFECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYEC--VSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp ECC-------C-EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSCEEE--EEEECCCCSCEEEEEEC
T ss_pred ccC-------CCeEEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCCeEE--EEEecCcCCCeEEEEEC
Confidence 872 234667889999999999999999983 66778999999999986433221 12234677799999999
Q ss_pred CCCCcEEEeecCCeEEEEEcccCCcC--ceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCc---------
Q 018697 178 PHDVNAVAATCESSVQFWDLRSMGKT--NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA--------- 243 (351)
Q Consensus 178 ~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------- 243 (351)
|++++|++++.|+.|++||++.++.. ..+. +| |.+++|+|+++ +|++++.|++|++||......
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred CCCCEEEEEeCCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 99999999999999999999876532 3343 44 99999999998 899999999999999754221
Q ss_pred -----ceeEeeC-CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceE
Q 018697 244 -----PIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSV 317 (351)
Q Consensus 244 -----~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 317 (351)
++..+.+ |...|.+++|+|++ ..|++++.|+.|++|+.........+. .........+|...|
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~----------~~~~~~~~~~h~~~V 306 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQPT----------FSLTAHLHQAHSQDV 306 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTSCC----------EEEEEEETTSSSSCE
T ss_pred CCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCcceee----------EEEEeeecccccCcE
Confidence 2334444 88899999999999 899999999999999987621110000 001122346799999
Q ss_pred EEEEeCCCCCceEEEeeeCCeEEEeecCccc
Q 018697 318 YGLAWSSREPWIFASLSYDGRVVVESVKPFL 348 (351)
Q Consensus 318 ~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~ 348 (351)
++++|+|+++.+|++++.||.|++|++.+..
T Consensus 307 ~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 307 NCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred eEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 9999999986589999999999999997643
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.5e-43 Score=293.59 Aligned_cols=284 Identities=17% Similarity=0.244 Sum_probs=240.7
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~ 94 (351)
+...|..+.++|+...++.|. .++.+++|++... .....+..|...|.+++|+|+++.|+++ +.|+.|+
T Consensus 12 h~~~V~~~~fsp~~~~l~s~~----~dg~v~lWd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~----s~d~~i~ 80 (304)
T 2ynn_A 12 RSDRVKGIDFHPTEPWVLTTL----YSGRVELWNYETQ---VEVRSIQVTETPVRAGKFIARKNWIIVG----SDDFRIR 80 (304)
T ss_dssp ECSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTT---EEEEEEECCSSCEEEEEEEGGGTEEEEE----ETTSEEE
T ss_pred CCCceEEEEECCCCCEEEEEc----CCCcEEEEECCCC---ceeEEeeccCCcEEEEEEeCCCCEEEEE----CCCCEEE
Confidence 445688889999998888775 6899999998753 2346677899999999999999998885 7999999
Q ss_pred EEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeee
Q 018697 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (351)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (351)
+||+. +.+.+..+.+|...|.+++|+|+++. +++++.|++|++||+.++.... ....+|...|.++
T Consensus 81 vwd~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~----~~~~~h~~~v~~v 146 (304)
T 2ynn_A 81 VFNYN---------TGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALE----QTFEGHEHFVMCV 146 (304)
T ss_dssp EEETT---------TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEE----EEECCCCSCEEEE
T ss_pred EEECC---------CCcEEEEEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchh----hhhcccCCcEEEE
Confidence 99998 67788899999999999999999984 6777999999999998643322 2234677799999
Q ss_pred EECC-CCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCC--CCCcEEEEecCCCeEEEEecccCCcceeEe
Q 018697 175 AWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDT--KKKHLLVTAADESGIHLWDLRMLKAPIQEL 248 (351)
Q Consensus 175 ~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 248 (351)
+|+| ++..|++++.|+.|++||++++.....+...+ +..++|+| ++. ++++|+.|++|++||+++ .+++..+
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~-~~~~~~~ 224 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQT-KSCVATL 224 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEEEETTT-TEEEEEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCCC-Cccceee
Confidence 9999 56789999999999999999887776666444 88888887 565 899999999999999997 7789999
Q ss_pred eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCc
Q 018697 249 PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPW 328 (351)
Q Consensus 249 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 328 (351)
.+|...|.+++|+|++ .+|++++.|++|++||+++ .+++..+..|...+++++|+|++..
T Consensus 225 ~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 225 EGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSST-------------------YKVEKTLNVGLERSWCIATHPTGRK 284 (304)
T ss_dssp ECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT-------------------CCEEEEECCSSSSEEEEEECTTCGG
T ss_pred CCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCC-------------------CceeeeccCCCccEEEEEECCCCCc
Confidence 9999999999999999 8999999999999999998 8889999999999999999998864
Q ss_pred e-EEEeeeCCeEEEeecCc
Q 018697 329 I-FASLSYDGRVVVESVKP 346 (351)
Q Consensus 329 ~-l~s~~~dg~v~vw~~~~ 346 (351)
. +++++ |..+.+|++..
T Consensus 285 ~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 285 NYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp GCEEEEE-TTEEEEEECC-
T ss_pred eEEEEec-CCceEEEEecc
Confidence 4 55555 56688888764
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-42 Score=297.81 Aligned_cols=282 Identities=14% Similarity=0.215 Sum_probs=238.7
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~ 94 (351)
+...+..+.++++...++.|+ .++.|++|++.... ....+..|...|.+++|+|+++.|+++ +.|+.|+
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s----~Dg~v~iWd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~----~~d~~v~ 122 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSAS----QDGKLIIWDSYTTN---KVHAIPLRSSWVMTCAYAPSGNYVACG----GLDNICS 122 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEE----TTTEEEEEETTTCC---EEEEEECSSSCEEEEEECTTSSEEEEE----ETTCEEE
T ss_pred CCCceEEEEECCCCCEEEEEe----CCCcEEEEECCCCC---cceEeecCCccEEEEEECCCCCEEEEE----eCCCeEE
Confidence 345677788888888888764 68999999987643 335567899999999999999988875 6899999
Q ss_pred EEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeee
Q 018697 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (351)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (351)
+|++... .........+.+|...|.++.|++++. +++++.|+.|++||+.++.... ...+|...|.++
T Consensus 123 iw~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~~~-----~~~~h~~~v~~~ 190 (340)
T 1got_B 123 IYNLKTR-----EGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQTT-----TFTGHTGDVMSL 190 (340)
T ss_dssp EEETTTC-----SBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEEEE-----EECCCSSCEEEE
T ss_pred EEECccC-----CCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcEEE-----EEcCCCCceEEE
Confidence 9998731 112355667889999999999999887 7888999999999998654322 233577799999
Q ss_pred EECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC-
Q 018697 175 AWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG- 250 (351)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~- 250 (351)
+|+|+++++++++.|+.|++||++++.....+. +| |.+++|+|++. +|++|+.|+.|++||++. .+.+..+..
T Consensus 191 ~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~-~~~~~~~~~~ 267 (340)
T 1got_B 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNGN-AFATGSDDATCRLFDLRA-DQELMTYSHD 267 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCT
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCC-CcEEEEEccC
Confidence 999999999999999999999999988877776 44 99999999998 899999999999999987 555555542
Q ss_pred -CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCce
Q 018697 251 -HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWI 329 (351)
Q Consensus 251 -~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 329 (351)
+...|.+++|+|++ .+|++|+.|+.|++||+.. .+.+..+.+|...|.+++|+|++. +
T Consensus 268 ~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~-------------------~~~~~~~~~h~~~v~~~~~s~dg~-~ 326 (340)
T 1got_B 268 NIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALK-------------------ADRAGVLAGHDNRVSCLGVTDDGM-A 326 (340)
T ss_dssp TCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTT-------------------CCEEEEEECCSSCEEEEEECTTSS-C
T ss_pred CcccceEEEEECCCC-CEEEEECCCCeEEEEEccc-------------------CcEeeEeecCCCcEEEEEEcCCCC-E
Confidence 33579999999999 9999999999999999998 788889999999999999999998 8
Q ss_pred EEEeeeCCeEEEee
Q 018697 330 FASLSYDGRVVVES 343 (351)
Q Consensus 330 l~s~~~dg~v~vw~ 343 (351)
|++++.|+.|++||
T Consensus 327 l~s~s~D~~i~iWd 340 (340)
T 1got_B 327 VATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEcCCccEEecC
Confidence 99999999999997
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=294.32 Aligned_cols=266 Identities=17% Similarity=0.213 Sum_probs=216.6
Q ss_pred CEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCC----CCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee
Q 018697 42 NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF----DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD 117 (351)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~----~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 117 (351)
+..++.........+..+...+|.+.|++++|+|+ +..|++ ++.|++|+||++.. ........+.
T Consensus 9 ~~~~~~~~~~~~~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~t----gs~D~~v~vW~~~~-------~~~~~~~~l~ 77 (321)
T 3ow8_A 9 SRENLYFQGTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVT----GSLDDLVKVWKWRD-------ERLDLQWSLE 77 (321)
T ss_dssp ------------CEEEEEETTSSSSCEEEEEEC-------CEEEE----EETTSCEEEEEEET-------TEEEEEEEEC
T ss_pred chhhHHHhhhhhhhheeeecccCCCcEEEEEEecCCCCCCCEEEE----EcCCCCEEEEECCC-------CCeeeeeeec
Confidence 33344343333334555677899999999999985 345655 47999999999872 2334556788
Q ss_pred ccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEc
Q 018697 118 AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDL 197 (351)
Q Consensus 118 ~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 197 (351)
+|...|.+++|++++. ++++++.|++|++||+.++.....+ ..+...+.+++|+|++++|++++.++.|++||+
T Consensus 78 gh~~~v~~~~~~~~~~-~l~s~s~D~~i~lWd~~~~~~~~~~-----~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 78 GHQLGVVSVDISHTLP-IAASSSLDAHIRLWDLENGKQIKSI-----DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEE-----ECCTTCCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred cCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCEEEEE-----eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence 9999999999999998 3666689999999999875433322 234457889999999999999999999999999
Q ss_pred ccCCcCceeecce--eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCC
Q 018697 198 RSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275 (351)
Q Consensus 198 ~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 275 (351)
++++....+.... +.+++|+|+++ +|++|+.|+.|++||+++ ++.+..+.+|..+|.+++|+|++ .+|++++.|+
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg 228 (321)
T 3ow8_A 152 ESGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDG 228 (321)
T ss_dssp TTCSEEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCCCEEEECTTS-CEEEEECTTS
T ss_pred CCCceeEEecCCCceEEEEEECCCCC-EEEEEcCCCeEEEEECCC-CcEEEEEcccCCceeEEEEcCCC-CEEEEEcCCC
Confidence 9988777666333 99999999998 899999999999999997 77888999999999999999999 9999999999
Q ss_pred eEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 276 TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
.|++||++. ..++..+.+|...|.+++|+|+++ +|++++.|+.|++||+.+.
T Consensus 229 ~i~iwd~~~-------------------~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 229 YIKIYDVQH-------------------ANLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CEEEEETTT-------------------CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT
T ss_pred eEEEEECCC-------------------cceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCC
Confidence 999999998 788889999999999999999998 8999999999999999753
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-42 Score=301.58 Aligned_cols=298 Identities=12% Similarity=0.200 Sum_probs=241.5
Q ss_pred ccceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcce
Q 018697 13 KYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG 92 (351)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~ 92 (351)
..+...|..+.++|+...++.|+ .++.|++|++.... ....+..|...|.+++|+|+++.|++ ++.|+.
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s----~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s~~g~~las----~~~d~~ 131 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSAS----QDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFAPNGQSVAC----GGLDSA 131 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEE----TTSEEEEEETTTTE---EEEEEECCCTTCCCCEECTTSSEEEE----CCSSSC
T ss_pred cccccEEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCc---cceEEecCCCCEEEEEECCCCCEEEE----eeCCCc
Confidence 33445678888899988888775 68999999986542 34567789999999999999998887 489999
Q ss_pred EEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccccee
Q 018697 93 AAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172 (351)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~ 172 (351)
+++|++...... .........+.+|.+.|.++.|+|++...+++++.|++|++||+.++............+|...|.
T Consensus 132 v~iw~~~~~~~~--~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 132 CSIFNLSSQADR--DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp CEEEECCCCSSC--CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred EEEEECCCCccc--cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 999998732111 112234556789999999999999876658888999999999999765544333333356788999
Q ss_pred eeEECC-CCCcEEEeecCCeEEEEEcccC-CcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeE
Q 018697 173 GGAWDP-HDVNAVAATCESSVQFWDLRSM-GKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE 247 (351)
Q Consensus 173 ~~~~~~-~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 247 (351)
+++|++ ++..+++++.|+.|++||++.. +.+..+. +| |.+++|+|++. +|++|+.|++|++||+++ +..+..
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~-~~~~~~ 286 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRT-GHQLQV 286 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTT-TEEEEE
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCC-CcEEEE
Confidence 999987 7788999999999999999854 4555554 55 99999999998 899999999999999997 656666
Q ss_pred eeCCC-------CceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceee----ccccce
Q 018697 248 LPGHT-------HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY----SDYEDS 316 (351)
Q Consensus 248 ~~~~~-------~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 316 (351)
+..+. ..|++++|+|+| .+|++|+.||.|++||... ++.+..+ .+|...
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~-------------------~~~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLL-------------------AEMVLNLGTLQNSHEGR 346 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTT-------------------CCEEEEECCSCSSCCCC
T ss_pred ecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCC-------------------CceEEEEecccCCCCCc
Confidence 65433 348999999999 9999999999999999987 5665555 679999
Q ss_pred EEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 317 VYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 317 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
|++++|+|++. +|++|+.|+.|++|++...
T Consensus 347 v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 347 ISCLGLSSDGS-ALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CCEEEECSSSS-EEEEECTTSCEEEEECCSS
T ss_pred eEEEEECCCCC-EEEEeeCCCCEEEEecCCC
Confidence 99999999999 8999999999999999754
No 11
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.4e-42 Score=303.43 Aligned_cols=329 Identities=19% Similarity=0.306 Sum_probs=252.6
Q ss_pred eccccceeEeeeecCCC-------CcceEEEeeeeeCCCCEEEEEEeC------------------------CCCCeEEE
Q 018697 10 YGLKYQARCISDVKADT-------DHTSFLTGTLSLKEENEVHLLRLS------------------------SGGTELIC 58 (351)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~i~~~~~~------------------------~~~~~~~~ 58 (351)
+.+++++-.+.+++..+ ..+++++||++....+.|+++++. ...+.+..
T Consensus 42 ~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 121 (430)
T 2xyi_A 42 HALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEI 121 (430)
T ss_dssp EECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEE
T ss_pred cCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEE
Confidence 35555665566655432 137899999988888999998765 12234555
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCC-CCCcceeeeeeeccccceeEEEecCCCCCcEE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL-NSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 137 (351)
.....|.+.|++++|+|++..++++ ++.++.|++|++....... ......++..+.+|...|.+++|+|++..+++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat---~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIAT---KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEE---ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEE---ECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 6778999999999999985555555 4789999999998321111 01125677888999999999999999986577
Q ss_pred EEecCCcEEEEEcCCCCCCcccc--cccccCcccceeeeEECC-CCCcEEEeecCCeEEEEEcccC---CcCceeecce-
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQ--SKQSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSM---GKTNSIEHAH- 210 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~- 210 (351)
+++.||.|++|++.......... .....+|...|.+++|+| ++..+++++.|+.|++||++++ +....+. .|
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~ 277 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHT 277 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCS
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCC
Confidence 78889999999998643322211 122346777999999999 5667778899999999999987 3444554 34
Q ss_pred --eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCC
Q 018697 211 --VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD 288 (351)
Q Consensus 211 --v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 288 (351)
|.+++|+|++++++++|+.||.|++||++....++..+..|...|.+++|+|+++.+|++++.|+.|++||+......
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 999999999987899999999999999998677899999999999999999999668999999999999999873222
Q ss_pred CCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 289 ELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
........ ...+++..+.+|...|++++|+|+++++|++++.||.|++|++.+.
T Consensus 358 ~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAED-----GPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHH-----CCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCcccccc-----CCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 11110000 0135677778899999999999999888999999999999999764
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.6e-42 Score=301.97 Aligned_cols=247 Identities=20% Similarity=0.280 Sum_probs=219.9
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 138 (351)
..+.+|.+.|++++|+|++..|+++ +.|++|+|||+. +.+....+.+|...|.+++|+|++. ++++
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~----s~Dg~i~vwd~~---------~~~~~~~l~~h~~~V~~v~~~~~~~-~l~s 167 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSA----SEDATIKVWDYE---------TGDFERTLKGHTDSVQDISFDHSGK-LLAS 167 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEE----ESSSCEEEEETT---------TCCCCEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred EeecccCCcEEEEEEcCCCCEEEEE----eCCCeEEEEECC---------CCcEEEEEeccCCcEEEEEEcCCCC-EEEE
Confidence 3467899999999999999888885 799999999998 6677889999999999999999998 3677
Q ss_pred EecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEE
Q 018697 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVD 215 (351)
Q Consensus 139 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~ 215 (351)
++.|++|++||+.+..... ...+|...|.+++|+|+++.+++++.|+.|++||++++.++..+. +| +.+++
T Consensus 168 gs~D~~i~iwd~~~~~~~~-----~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~ 241 (410)
T 1vyh_C 168 CSADMTIKLWDFQGFECIR-----TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVR 241 (410)
T ss_dssp EETTSCCCEEETTSSCEEE-----CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEE
T ss_pred EeCCCeEEEEeCCCCceeE-----EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEE
Confidence 7899999999998643222 223677799999999999999999999999999999998887776 44 99999
Q ss_pred cCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCC-------------------CCeEEEeeCCCe
Q 018697 216 YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY-------------------DGFILSAGTDST 276 (351)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------~~~l~s~~~dg~ 276 (351)
++|++. ++++|+.|+.|++||+++ ......+..|...|.+++|+|++ ..+|++|+.|+.
T Consensus 242 ~~~~g~-~l~s~s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 242 PNQDGT-LIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 999998 899999999999999997 66788899999999999999962 168999999999
Q ss_pred EEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 277 VNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 277 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
|++||++. +.++..+.+|...|++++|+|+++ +|++++.|+.|++||+.+.
T Consensus 320 i~iwd~~~-------------------~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 320 IKMWDVST-------------------GMCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp EEEEETTT-------------------TEEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTS
T ss_pred EEEEECCC-------------------CceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC
Confidence 99999998 888999999999999999999998 8999999999999998653
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.7e-41 Score=289.13 Aligned_cols=286 Identities=15% Similarity=0.171 Sum_probs=237.2
Q ss_pred cceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceE
Q 018697 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGA 93 (351)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i 93 (351)
.+...|..+.++++..+++.|+ .++.+.+|+..... ....+..|...|.+++|+|++..++++ +.|+.+
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s----~Dg~v~vWd~~~~~---~~~~~~~~~~~v~~~~~sp~g~~lasg----~~d~~i 130 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSS----QDGKVIVWDSFTTN---KEHAVTMPCTWVMACAYAPSGCAIACG----GLDNKC 130 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTCC---EEEEEECSSSCCCEEEECTTSSEEEEE----STTSEE
T ss_pred CCCCeEEEEEECCCCCEEEEEe----CCCeEEEEECCCCC---cceEEecCCCCEEEEEECCCCCEEEEe----eCCCCE
Confidence 3445677888889988888774 68999999976643 234556788999999999999988875 899999
Q ss_pred EEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceee
Q 018697 94 AIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSG 173 (351)
Q Consensus 94 ~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 173 (351)
++|++..... .........+..|...|.+++|+|++.. +++++.|++|++||+.++..... ..+|...|.+
T Consensus 131 ~v~~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~~~~~~-----~~~h~~~v~~ 201 (354)
T 2pbi_B 131 SVYPLTFDKN---ENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESGQLLQS-----FHGHGADVLC 201 (354)
T ss_dssp EEEECCCCTT---CCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEE-----EECCSSCEEE
T ss_pred EEEEEecccc---ccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCeEEEE-----EcCCCCCeEE
Confidence 9999863211 1122445667789999999999999984 77778999999999987543322 2356778999
Q ss_pred eEECC--CCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe
Q 018697 174 GAWDP--HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL 248 (351)
Q Consensus 174 ~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 248 (351)
++|+| +++.|++++.|+.|++||+++++++..+. .| |.+++|+|++. +|++|+.|++|++||++. .+.+..+
T Consensus 202 ~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~-~~~~~~~ 278 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYYPSGD-AFASGSDDATCRLYDLRA-DREVAIY 278 (354)
T ss_dssp EEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEEEE
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCC-CcEEEEE
Confidence 99987 46789999999999999999998877776 44 99999999998 899999999999999987 5455555
Q ss_pred eCC--CCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCC
Q 018697 249 PGH--THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSRE 326 (351)
Q Consensus 249 ~~~--~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 326 (351)
..+ ...+.+++|+|++ .+|++++.|+.|++||+.. ++.+..+.+|...|++++|+|++
T Consensus 279 ~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~-------------------~~~~~~l~~h~~~v~~l~~spdg 338 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLK-------------------GSRVSILFGHENRVSTLRVSPDG 338 (354)
T ss_dssp CCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTT-------------------CSEEEEECCCSSCEEEEEECTTS
T ss_pred cCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCC-------------------CceEEEEECCCCcEEEEEECCCC
Confidence 433 3578999999999 9999999999999999988 78888899999999999999999
Q ss_pred CceEEEeeeCCeEEEee
Q 018697 327 PWIFASLSYDGRVVVES 343 (351)
Q Consensus 327 ~~~l~s~~~dg~v~vw~ 343 (351)
+ +|++++.|+.|++|+
T Consensus 339 ~-~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 339 T-AFCSGSWDHTLRVWA 354 (354)
T ss_dssp S-CEEEEETTSEEEEEC
T ss_pred C-EEEEEcCCCCEEecC
Confidence 9 899999999999996
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-41 Score=294.94 Aligned_cols=282 Identities=19% Similarity=0.275 Sum_probs=229.1
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeec------------------CCcceeeeeeCCCCCc
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFS------------------HPNEIWDLSSCPFDQR 79 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------------------h~~~v~~i~~~~~~~~ 79 (351)
.+..+.++|++..++.|. ++.+.+|++..... ...+.. +...|.+++|+|+++.
T Consensus 66 ~V~~v~fspdg~~la~g~-----~~~v~i~~~~~g~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-----NKTTQVYRVSDGSL---VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-----BSCEEEEETTTCCE---EEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred EEEEEEECCCCCEEEEEc-----CCcEEEEEecCCCE---EEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 455677888888888763 46788888765432 122222 2235999999999998
Q ss_pred eEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccc
Q 018697 80 IFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQV 159 (351)
Q Consensus 80 l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~ 159 (351)
|+++ +.|+.|++||+. ..+.+..+.+|...|.+++|+|++.. +++++.|++|++||+.++......
T Consensus 138 l~s~----~~d~~i~iwd~~---------~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 138 LATG----AEDRLIRIWDIE---------NRKIVMILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp EEEE----ETTSCEEEEETT---------TTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEE----cCCCeEEEEECC---------CCcEEEEEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCCeeEEEE
Confidence 8885 689999999998 66788889999999999999999984 677789999999999875432222
Q ss_pred ccccccCcccceeeeEECC-CCCcEEEeecCCeEEEEEcccCCcCceee------cce---eEEEEcCCCCCcEEEEecC
Q 018697 160 QSKQSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIE------HAH---VRNVDYDTKKKHLLVTAAD 229 (351)
Q Consensus 160 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~---v~~~~~~~~~~~~l~~~~~ 229 (351)
. +...+.+++|+| +++++++++.|+.|++||+++++.+..+. .+| |.+++|+|+++ +|++|+.
T Consensus 204 ~------~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~ 276 (393)
T 1erj_A 204 S------IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSL 276 (393)
T ss_dssp E------CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEET
T ss_pred E------cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeC
Confidence 1 234799999999 88999999999999999999887665552 234 99999999998 8999999
Q ss_pred CCeEEEEecccCC-----------cceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccC
Q 018697 230 ESGIHLWDLRMLK-----------APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVES 298 (351)
Q Consensus 230 dg~i~i~d~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 298 (351)
|+.|++||++... .+...+.+|...|.+++|+|++ .+|++++.|+.|++||.+.
T Consensus 277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~-------------- 341 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKS-------------- 341 (393)
T ss_dssp TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTT--------------
T ss_pred CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCC--------------
Confidence 9999999997522 2345677899999999999999 9999999999999999998
Q ss_pred CcccccccceeeccccceEEEEEeCC------CCCceEEEeeeCCeEEEeecCcccc
Q 018697 299 PNQRANSLLNSYSDYEDSVYGLAWSS------REPWIFASLSYDGRVVVESVKPFLS 349 (351)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~l~s~~~dg~v~vw~~~~~~~ 349 (351)
++++..+.+|...|.+++|++ ++. +|++++.||.|++|++++..+
T Consensus 342 -----~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~~~~p 392 (393)
T 1erj_A 342 -----GNPLLMLQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYKKIAP 392 (393)
T ss_dssp -----CCEEEEEECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEEEC--
T ss_pred -----CeEEEEECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECcccccCC
Confidence 888899999999999999986 566 899999999999999976544
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.6e-41 Score=283.13 Aligned_cols=288 Identities=15% Similarity=0.248 Sum_probs=241.1
Q ss_pred eeccccceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecC
Q 018697 9 GYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG 88 (351)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~ 88 (351)
.+.+..+...+..+.++++...++.|. .++.+++|++.... ....+.+|...|.+++|+|+++.|+++ +
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~----~dg~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~----~ 84 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSS----ADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLLVSA----S 84 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEE----E
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEee----CCCeEEEEeCCCcc---cchhhccCCCceEEEEEcCCCCEEEEE----C
Confidence 344444556788888999988888774 67899999986543 345677899999999999999888885 6
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 168 (351)
.|+.|++||+. ..+.+..+.+|...|.+++|+|++.. +++++.|+.|++||+.++..... ...|.
T Consensus 85 ~d~~i~vwd~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~-----~~~~~ 149 (312)
T 4ery_A 85 DDKTLKIWDVS---------SGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKT-----LPAHS 149 (312)
T ss_dssp TTSEEEEEETT---------TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTCCEEEE-----ECCCS
T ss_pred CCCEEEEEECC---------CCcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCEEEEE-----ecCCC
Confidence 89999999998 56788889999999999999999984 67778999999999986543322 23466
Q ss_pred cceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcce
Q 018697 169 HYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI 245 (351)
Q Consensus 169 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 245 (351)
..+.+++|+|+++.+++++.|+.|++||+++++.+..+...+ +..++|+|+++ ++++++.|+.|++||+++ .+.+
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~~~ 227 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSK-GKCL 227 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTT-TEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCC-CcEE
Confidence 689999999999999999999999999999988776665333 89999999998 799999999999999997 6678
Q ss_pred eEeeCCCCceeE--EEec-CCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEe
Q 018697 246 QELPGHTHWTWA--VCCN-PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAW 322 (351)
Q Consensus 246 ~~~~~~~~~v~~--~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 322 (351)
..+.+|...+.. ..++ +++ .+|++|+.|+.|++||++. ++.+..+.+|...|.+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~-------------------~~~~~~~~~h~~~v~~~~~ 287 (312)
T 4ery_A 228 KTYTGHKNEKYCIFANFSVTGG-KWIVSGSEDNLVYIWNLQT-------------------KEIVQKLQGHTDVVISTAC 287 (312)
T ss_dssp EEECSSCCSSSCCCEEEECSSS-CEEEECCTTSCEEEEETTT-------------------CCEEEEECCCSSCEEEEEE
T ss_pred EEEEecCCceEEEEEEEEeCCC-cEEEEECCCCEEEEEECCC-------------------chhhhhhhccCCcEEEEee
Confidence 888888765433 3344 455 8999999999999999998 8889999999999999999
Q ss_pred CCCCCceEEEee--eCCeEEEeecC
Q 018697 323 SSREPWIFASLS--YDGRVVVESVK 345 (351)
Q Consensus 323 ~~~~~~~l~s~~--~dg~v~vw~~~ 345 (351)
+|+++ ++++++ .|+.|++|+.+
T Consensus 288 ~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 288 HPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSSS-EEEEEECTTTCCEEEEECC
T ss_pred cCcCC-ceEEEEccCCccEEEecCC
Confidence 99998 788886 69999999964
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-41 Score=285.84 Aligned_cols=297 Identities=17% Similarity=0.275 Sum_probs=216.8
Q ss_pred ccccceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEee-ec-CCcceeeeeeCCCCCceEEEEeecC
Q 018697 11 GLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGL-FS-HPNEIWDLSSCPFDQRIFSTVFSTG 88 (351)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~-h~~~v~~i~~~~~~~~l~~~~~~~~ 88 (351)
.++.....+..+.++++ .++.| ..++.|++|++........ ..+ .+ |...|.+++|+|+++.|+++ +
T Consensus 9 ~~~~h~~~v~~~~~s~~--~las~----~~D~~i~lw~~~~~~~~~~-~~~~~~~h~~~v~~v~~sp~~~~las~----s 77 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG--ILATG----STDRKIKLVSVKYDDFTLI-DVLDETAHKKAIRSVAWRPHTSLLAAG----S 77 (330)
T ss_dssp EEECCSSCEEEEEEETT--EEEEE----ESSSCEEEEECSSSCCEEE-EEECTTCCCSCEEEEEECTTSSEEEEE----E
T ss_pred eeccCCCceeeeccCCC--EEEEE----cCCCEEEEEEecCCCeEEE-EEEecCCccCCEEEEEECCCCCEEEEE----e
Confidence 34444455666666666 55555 3689999999976433332 233 34 99999999999999888875 6
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 168 (351)
.|++|+||++..... .....+.+..+.+|...|.+++|+|+++. +++++.|++|++||+......... .....+|.
T Consensus 78 ~D~~v~iw~~~~~~~--~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-las~s~D~~v~iwd~~~~~~~~~~-~~~~~~h~ 153 (330)
T 2hes_X 78 FDSTVSIWAKEESAD--RTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSVWIWETDESGEEYEC-ISVLQEHS 153 (330)
T ss_dssp TTSCEEEEEC---------CCCEEEEEEC----CEEEEEECTTSCE-EEEEETTSCEEEEECCTTCCCCEE-EEEECCCS
T ss_pred CCCcEEEEEcccCcC--ccccceeEEEEcCCCCcEEEEEECCCCCE-EEEEeCCCEEEEEeccCCCCCeEE-EEEeccCC
Confidence 899999999852100 00124567788899999999999999984 667789999999999643222111 12234677
Q ss_pred cceeeeEECCCCCcEEEeecCCeEEEEEcccC--CcCceeecce---eEEEEcCCC--CCcEEEEecCCCeEEEEecccC
Q 018697 169 HYLSGGAWDPHDVNAVAATCESSVQFWDLRSM--GKTNSIEHAH---VRNVDYDTK--KKHLLVTAADESGIHLWDLRML 241 (351)
Q Consensus 169 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~---v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 241 (351)
..|.+++|+|++.+|++++.|+.|++||++++ +++..+. +| |.+++|+|+ +. ++++|+.|++|++||++..
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEecCC
Confidence 89999999999999999999999999999876 3444554 45 999999998 54 7999999999999999752
Q ss_pred C-------cceeEeeC-CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccc--ccce-ee
Q 018697 242 K-------APIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN--SLLN-SY 310 (351)
Q Consensus 242 ~-------~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~ 310 (351)
. .....+.. |...|.+++|+++ .+|++++.|+.|++||... + +.+. ..
T Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~--~~l~s~~~dg~v~iw~~~~-------------------~~~~~~~~~~ 290 (330)
T 2hes_X 232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEVD-------------------GEWKVFAKRA 290 (330)
T ss_dssp CTTSCEEEEEEEECCSCCSSCEEEEEECTT--SCEEEEETTSCEEEEEEET-------------------TEEEEEEEES
T ss_pred CccccceeEEeeecccccccceEEEEEcCC--CEEEEEeCCCEEEEEEcCC-------------------CceEEEeccc
Confidence 1 23344444 8999999999965 4899999999999999876 3 2232 23
Q ss_pred ccccc-eEEEEEeCC--CCCceEEEeeeCCeEEEeecCc
Q 018697 311 SDYED-SVYGLAWSS--REPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 311 ~~~~~-~v~~~~~~~--~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
.+|.. .|.+++|+| ++. +|++++.||.|++|++++
T Consensus 291 ~~h~~~~v~~v~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 291 LCHGVYEINVVKWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CTTTTSCEEEEEEC-----C-CEEEEETTSEEEEEEC--
T ss_pred cccccceEEEEEEecCCCce-EEEEecCCCcEEEEEecc
Confidence 56776 899999999 566 899999999999999865
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.8e-40 Score=283.31 Aligned_cols=298 Identities=16% Similarity=0.261 Sum_probs=223.7
Q ss_pred ceeEeeeecC-----CC-CcceEEEeeeeeCCCCEEEEEEeCCCCC----eEEEEeeecCCcceeeeeeCCCCCceEEEE
Q 018697 15 QARCISDVKA-----DT-DHTSFLTGTLSLKEENEVHLLRLSSGGT----ELICEGLFSHPNEIWDLSSCPFDQRIFSTV 84 (351)
Q Consensus 15 ~~~~~~~~~~-----~~-~~~~~~~g~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~ 84 (351)
+...|..+.+ .+ +...++.|+ .++.|++|++..... ......+.+|...|.+++|+|++..++++
T Consensus 20 H~~~V~~~~~~~s~~~~~d~~~l~sgs----~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~- 94 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENEDSPVLISGS----RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS- 94 (343)
T ss_dssp CSSCEEEEEECCCSSTTCCCCEEEEEE----TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE-
T ss_pred chhhhhheeeEEEeecCCCCCEEEEEc----CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE-
Confidence 3445555554 44 666677664 689999999976432 23446678999999999999999888875
Q ss_pred eecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccc
Q 018697 85 FSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS 164 (351)
Q Consensus 85 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 164 (351)
+.|++|++||+. +.+.+..+.+|...|.+++|+|+++. +++++.|+.|++||+... .. ......
T Consensus 95 ---s~D~~v~lwd~~---------~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~~-~~--~~~~~~ 158 (343)
T 2xzm_R 95 ---SWDKTLRLWDLR---------TGTTYKRFVGHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILGE-CK--FSSAEK 158 (343)
T ss_dssp ---ETTSEEEEEETT---------SSCEEEEEECCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSSC-EE--EECCTT
T ss_pred ---cCCCcEEEEECC---------CCcEEEEEcCCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccCC-ce--eeeecc
Confidence 799999999998 56788889999999999999999984 677789999999999732 11 111222
Q ss_pred cCcccceeeeEECCCC----------CcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCC
Q 018697 165 SGMLHYLSGGAWDPHD----------VNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADES 231 (351)
Q Consensus 165 ~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg 231 (351)
.+|...+.+++|+|++ .++++++.|+.|++||.. .+....+. .| |.+++|+|+++ +|++|+.|+
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~-~h~~~v~~~~~s~~g~-~l~sgs~dg 235 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFK-AHESNVNHLSISPNGK-YIATGGKDK 235 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTC
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEc-CccccceEEEECCCCC-EEEEEcCCC
Confidence 3567789999999987 689999999999999943 34444444 44 99999999998 899999999
Q ss_pred eEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeec
Q 018697 232 GIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS 311 (351)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (351)
.|++||++....+...+. +...|.+++|+|++ .++++ +.|+.|++||+.......... ....+ ........
T Consensus 236 ~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~-~~la~-~~d~~v~iw~~~~~~~~~~~~--~~~~~----~~~~~~~~ 306 (343)
T 2xzm_R 236 KLLIWDILNLTYPQREFD-AGSTINQIAFNPKL-QWVAV-GTDQGVKIFNLMTQSKAPVCT--IEAEP----ITKAEGQK 306 (343)
T ss_dssp EEEEEESSCCSSCSEEEE-CSSCEEEEEECSSS-CEEEE-EESSCEEEEESSSCCSCSEEE--CCCCS----GGGBTTBC
T ss_pred eEEEEECCCCcccceeec-CCCcEEEEEECCCC-CEEEE-ECCCCEEEEEeCCCCCCceEE--eecCc----chhhhhhc
Confidence 999999965455555553 55679999999998 77664 558889999998622110000 00000 00111223
Q ss_pred cccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 312 DYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 312 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+|...|.+++|+|+++ +|++|+.||.|++|++++
T Consensus 307 ~~~~~v~~~~~sp~g~-~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 307 GKNPQCTSLAWNALGK-KLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CSCCCEEEEEECSSSC-CEEEEETTSEEEEEEEEE
T ss_pred CCCCceEEEEECCCCC-eEEEecCCceEEEEEEEc
Confidence 6788899999999999 899999999999999865
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.2e-42 Score=292.37 Aligned_cols=255 Identities=18% Similarity=0.188 Sum_probs=204.3
Q ss_pred cCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccc--cCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEe
Q 018697 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPEL--YGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI 140 (351)
Q Consensus 63 ~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 140 (351)
.|+..|.+++|+|+|+.|+++ .|+++++||.... ......+..........|...|.+++|+|++. +++++
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~-----sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~--l~~~s 100 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGA-----SSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERG--ILVAS 100 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEE-----ECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTE--EEEEE
T ss_pred cccCCEEEEEECCCCCEEEEE-----eCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCe--EEEEE
Confidence 577889999999999887764 3667777764210 00000011112222335678899999999976 78889
Q ss_pred cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcC
Q 018697 141 DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYD 217 (351)
Q Consensus 141 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~ 217 (351)
.||+|+|||+.+++.... ......+|...|++++|+|++++|++++.|+.|++||+++++.+..+. +| |.+++|+
T Consensus 101 ~dg~v~lWd~~~~~~~~~-~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~-~h~~~V~~~~~~ 178 (344)
T 4gqb_B 101 DSGAVELWELDENETLIV-SKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR-AHAAQVTCVAAS 178 (344)
T ss_dssp TTSEEEEEEECTTSSCEE-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEC
T ss_pred CCCEEEEEeccCCCceeE-eeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-CcCCceEEEEec
Confidence 999999999997654332 223344788899999999999999999999999999999998888777 55 9999999
Q ss_pred CCCCcEEEEecCCCeEEEEecccCCcceeEee--CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCccc
Q 018697 218 TKKKHLLVTAADESGIHLWDLRMLKAPIQELP--GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESL 295 (351)
Q Consensus 218 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 295 (351)
|++..+|++++.|++|++||+++ .++...+. .|...+.+++|+|++..+|++|+.|+.|++||+++
T Consensus 179 ~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~----------- 246 (344)
T 4gqb_B 179 PHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS----------- 246 (344)
T ss_dssp SSCTTEEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----------
T ss_pred CCCCCceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-----------
Confidence 99977899999999999999997 55666654 45667999999997768999999999999999998
Q ss_pred ccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 296 VESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++++.++.+|...|++++|+|++..+|++++.|++|+|||+..
T Consensus 247 --------~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 247 --------TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp ----------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred --------CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 8899999999999999999999865899999999999999875
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.5e-40 Score=280.63 Aligned_cols=286 Identities=14% Similarity=0.234 Sum_probs=231.9
Q ss_pred ccccceeEeeeecCCCCc-ceEEEeeeeeCCCCEEEEEEeCCCCCe--EEEEeeecCCcceeeeeeCCCCCceEEEEeec
Q 018697 11 GLKYQARCISDVKADTDH-TSFLTGTLSLKEENEVHLLRLSSGGTE--LICEGLFSHPNEIWDLSSCPFDQRIFSTVFST 87 (351)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~ 87 (351)
.++.+...+..+.++++. ..++.| ..++.+++|++...... .....+.+|...|.+++|+|++++|+++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~----s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~---- 83 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSA----SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA---- 83 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEE----ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE----
T ss_pred EEccccceEEEEEccCCCccEEEEe----cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE----
Confidence 344556677788888765 455554 36899999998754332 3346678999999999999999998885
Q ss_pred CCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCc
Q 018697 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (351)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 167 (351)
+.|++|++||+. +.+.+..+.+|...|.+++|+|++.. +++++.|++|++||++. ... ....+|
T Consensus 84 s~D~~v~~wd~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~vwd~~~-~~~-----~~~~~h 147 (319)
T 3frx_A 84 SWDKTLRLWDVA---------TGETYQRFVGHKSDVMSVDIDKKASM-IISGSRDKTIKVWTIKG-QCL-----ATLLGH 147 (319)
T ss_dssp ETTSEEEEEETT---------TTEEEEEEECCSSCEEEEEECTTSCE-EEEEETTSCEEEEETTS-CEE-----EEECCC
T ss_pred eCCCEEEEEECC---------CCCeeEEEccCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC-CeE-----EEEecc
Confidence 799999999998 67888899999999999999999983 67779999999999973 111 122357
Q ss_pred ccceeeeEECCCC------CcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEec
Q 018697 168 LHYLSGGAWDPHD------VNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDL 238 (351)
Q Consensus 168 ~~~v~~~~~~~~~------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 238 (351)
...+.++.|.|.. ..+++++.|+.|++||+++.+....+. +| |.+++|+|+++ +|++|+.|+.|++||+
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~ 225 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHNSNINTLTASPDGT-LIASAGKDGEIMLWNL 225 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSS-EEEEEETTCEEEEEET
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-CCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEC
Confidence 7789999999854 479999999999999999877666665 44 99999999998 8999999999999999
Q ss_pred ccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceee--------
Q 018697 239 RMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY-------- 310 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 310 (351)
+. .+++..+.. ...|.+++|+|++ .+|++++.+ .+++|++.. ...+..+
T Consensus 226 ~~-~~~~~~~~~-~~~v~~~~~sp~~-~~la~~~~~-~i~v~~~~~-------------------~~~~~~~~~~~~~~~ 282 (319)
T 3frx_A 226 AA-KKAMYTLSA-QDEVFSLAFSPNR-YWLAAATAT-GIKVFSLDP-------------------QYLVDDLRPEFAGYS 282 (319)
T ss_dssp TT-TEEEEEEEC-CSCEEEEEECSSS-SEEEEEETT-EEEEEEETT-------------------EEEEEEECCCCTTCC
T ss_pred CC-CcEEEEecC-CCcEEEEEEcCCC-CEEEEEcCC-CcEEEEeCc-------------------CeeeeccCccccccc
Confidence 97 667777774 5689999999999 888887755 599999986 3333332
Q ss_pred ccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 311 SDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 311 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
..|...+.+++|+|+|+ +|++++.|+.|++|++.+
T Consensus 283 ~~~~~~v~~~~~spdg~-~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 283 KAAEPHAVSLAWSADGQ-TLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp GGGCCCEEEEEECTTSS-EEEEEETTSCEEEEEEEE
T ss_pred cCcCcceeEEEECCCCC-EEEEeecCceEEEEEEee
Confidence 24566799999999999 899999999999999864
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.1e-41 Score=290.51 Aligned_cols=256 Identities=19% Similarity=0.168 Sum_probs=204.9
Q ss_pred ecCCcceeeeeeCCCCCceEEEEeecC--CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEE
Q 018697 62 FSHPNEIWDLSSCPFDQRIFSTVFSTG--ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVS 139 (351)
Q Consensus 62 ~~h~~~v~~i~~~~~~~~l~~~~~~~~--~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 139 (351)
..|+..|.+++|+|||++|+++..... .|+.|++|+.... .+..........|...|.+++|+|++. ++++
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~-----~~~~~~~~~~~~~~~~V~~~~~s~d~~--~l~~ 111 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEG-----APNESLCTAGVQTEAGVTDVAWVSEKG--ILVA 111 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC--------CGGGCSEEEECSSCEEEEEEETTTE--EEEE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCC-----CcceeEecccCCCCCCEEEEEEcCCCC--EEEE
Confidence 469999999999999999988621000 1778999987621 112233344567899999999999987 7778
Q ss_pred ecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEc
Q 018697 140 IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDY 216 (351)
Q Consensus 140 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~ 216 (351)
+.|++|+|||+.+++.... ......+|...|.+++|+|++++|++++.|+.|++||+++++.+..+. .| |.+++|
T Consensus 112 s~dg~v~lWd~~~~~~~~~-~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~-~h~~~v~~v~~ 189 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLV-NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN-AHSSEVNCVAA 189 (357)
T ss_dssp ETTSCEEEC--------CC-CCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEE
T ss_pred ECCCEEEEeeccccceeEE-EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEE
Confidence 8899999999987543322 222334678899999999999999999999999999999998887776 44 999999
Q ss_pred CCCCCcEEEEecCCCeEEEEecccCCcceeEe--eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcc
Q 018697 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQEL--PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSES 294 (351)
Q Consensus 217 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 294 (351)
+|+++.++++++.|+.|++||+++ .+++..+ ..|...+.+++|+|+++.+|++|+.|+.|++||++.
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~---------- 258 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRK-PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN---------- 258 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTS-SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC----------
T ss_pred ccCCCceeeeeccCCceEEEECCC-CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC----------
Confidence 999876899999999999999987 4444443 356778999999998768999999999999999998
Q ss_pred cccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 295 LVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++++..+.+|...|++++|+|++..+|++++.|++|+|||++.
T Consensus 259 ---------~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 259 ---------PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp ---------GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred ---------CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 8889999999999999999999866899999999999999875
No 21
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.6e-40 Score=283.07 Aligned_cols=249 Identities=18% Similarity=0.256 Sum_probs=214.8
Q ss_pred EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEE
Q 018697 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 58 ~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 137 (351)
...+.+|.+.|.+++|+|+++.|+++ +.|++|++||+. ..+.+..+..|...|.+++|+|++.. ++
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~----s~Dg~v~iWd~~---------~~~~~~~~~~~~~~v~~~~~s~~~~~-l~ 113 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSA----SQDGKLIIWDSY---------TTNKVHAIPLRSSWVMTCAYAPSGNY-VA 113 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEE----ETTTEEEEEETT---------TCCEEEEEECSSSCEEEEEECTTSSE-EE
T ss_pred heeecCCCCceEEEEECCCCCEEEEE----eCCCcEEEEECC---------CCCcceEeecCCccEEEEEECCCCCE-EE
Confidence 46678999999999999999988885 799999999988 56778888899999999999999984 66
Q ss_pred EEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEE
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~ 214 (351)
+++.|+.|++|++.+....... .....+|...+.++.|++++. +++++.|+.|++||+++++....+. +| |.++
T Consensus 114 s~~~d~~v~iw~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~ 190 (340)
T 1got_B 114 CGGLDNICSIYNLKTREGNVRV-SRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSL 190 (340)
T ss_dssp EEETTCEEEEEETTTCSBSCEE-EEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEE
T ss_pred EEeCCCeEEEEECccCCCccee-EEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEE
Confidence 7789999999999864332222 223456788999999998765 8899999999999999988877776 44 9999
Q ss_pred EcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcc
Q 018697 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSES 294 (351)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 294 (351)
+|+|+++ ++++|+.|+.|++||+++ ..++..+.+|...|++++|+|++ .+|++++.|++|++||++.
T Consensus 191 ~~~~~~~-~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~---------- 257 (340)
T 1got_B 191 SLAPDTR-LFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRA---------- 257 (340)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------
T ss_pred EECCCCC-EEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCC----------
Confidence 9999998 899999999999999997 66888999999999999999999 9999999999999999997
Q ss_pred cccCCcccccccceeec--cccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 295 LVESPNQRANSLLNSYS--DYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 295 ~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
.+.+..+. .+...|.+++|+|+++ +|++++.|+.|++||+.+
T Consensus 258 ---------~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 258 ---------DQELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp ---------TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTT
T ss_pred ---------CcEEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEccc
Confidence 56555553 2335799999999999 899999999999999865
No 22
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-41 Score=294.95 Aligned_cols=303 Identities=18% Similarity=0.299 Sum_probs=246.4
Q ss_pred eeEeeeecCCCCcc-eEEEeeeee------CCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecC
Q 018697 16 ARCISDVKADTDHT-SFLTGTLSL------KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG 88 (351)
Q Consensus 16 ~~~~~~~~~~~~~~-~~~~g~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~ 88 (351)
...+..+.++|+.. .++.|+... ..++.|++|++....... ......|...|.+++|+|+++.|+++ +
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~----~ 86 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK-PIASLQVDSKFNDLDWSHNNKIIAGA----L 86 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS-CSCCCCCSSCEEEEEECSSSSCEEEE----E
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc-EEEEEecCCceEEEEECCCCCeEEEE----c
Confidence 44677788999876 666664433 578899999988653211 12234689999999999999988885 6
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCC----cccccccc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN----AQVQSKQS 164 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~----~~~~~~~~ 164 (351)
.|+.|++|++.... ...+.+..+..|...|.+++|+|++..++++++.|+.|++||+.+.... ........
T Consensus 87 ~dg~v~vw~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 161 (416)
T 2pm9_A 87 DNGSLELYSTNEAN-----NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS 161 (416)
T ss_dssp SSSCEEEECCSSTT-----SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS
T ss_pred cCCeEEEeeccccc-----ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc
Confidence 89999999998210 0134777888999999999999994445777788999999999976511 11111223
Q ss_pred cCcccceeeeEECCC-CCcEEEeecCCeEEEEEcccCCcCceeecc-------e-eEEEEcCCCCCcEEEEecCCC---e
Q 018697 165 SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHA-------H-VRNVDYDTKKKHLLVTAADES---G 232 (351)
Q Consensus 165 ~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~-v~~~~~~~~~~~~l~~~~~dg---~ 232 (351)
..|...+.+++|+|+ +..+++++.|+.|++||+++++.+..+... . +.+++|+|++..++++++.|+ .
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 457779999999999 678888999999999999998877766642 2 999999999866899999998 9
Q ss_pred EEEEecccCCcceeEee-CCCCceeEEEecC-CCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceee
Q 018697 233 IHLWDLRMLKAPIQELP-GHTHWTWAVCCNP-EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY 310 (351)
Q Consensus 233 i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (351)
|++||++....++..+. +|...|.+++|+| ++ .+|++++.|+.|++||++. ++++..+
T Consensus 242 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd~~~-------------------~~~~~~~ 301 (416)
T 2pm9_A 242 ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWNPES-------------------AEQLSQF 301 (416)
T ss_dssp CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEECSSS-------------------CCEEEEE
T ss_pred EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEeeCCC-------------------Cccceee
Confidence 99999998556788888 8999999999999 77 9999999999999999998 8889999
Q ss_pred ccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCccc
Q 018697 311 SDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFL 348 (351)
Q Consensus 311 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~ 348 (351)
..|...|.+++|+|+++.+|++++.|+.|++|++....
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 99999999999999994499999999999999997643
No 23
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.1e-40 Score=275.08 Aligned_cols=253 Identities=17% Similarity=0.283 Sum_probs=202.3
Q ss_pred eeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcEE
Q 018697 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKL 137 (351)
Q Consensus 60 ~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~ 137 (351)
.+.+|.+.|++++|+|++++|+++ +.|++|+||++.. ...+.+.++.+|.++|.+++|+++ +. +++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~----s~D~~v~iw~~~~-------~~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~ 71 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATC----SSDKTIKIFEVEG-------ETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILA 71 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEE----ETTSCEEEEEBCS-------SCBCCCEEECCCSSCEEEEEECCGGGCS-EEE
T ss_pred eccCCcCceEEEEECCCCCEEEEE----eCCCEEEEEecCC-------CCcEEEEEEccccCCeEEEEecCCCcCC-EEE
Confidence 456899999999999999998885 7999999999872 134667889999999999999864 55 466
Q ss_pred EEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCC--CCcEEEeecCCeEEEEEcccCCcC-ceeecce---e
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKT-NSIEHAH---V 211 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~---v 211 (351)
+++.|++|++||+.++..... ....+|...|.+++|+|+ +..|++++.|+.|++||++++... .....+| +
T Consensus 72 s~s~D~~v~iWd~~~~~~~~~---~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v 148 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRWSQI---AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 148 (297)
T ss_dssp EEETTTEEEEEEBSSSCBCCC---EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCE
T ss_pred EEcCCCEEEEEEcCCCceEEE---EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCcc
Confidence 779999999999986432111 122356779999999997 789999999999999999876422 2222244 9
Q ss_pred EEEEcCCC-------------CCcEEEEecCCCeEEEEecccCCc---ceeEeeCCCCceeEEEecCCC--CCeEEEeeC
Q 018697 212 RNVDYDTK-------------KKHLLVTAADESGIHLWDLRMLKA---PIQELPGHTHWTWAVCCNPEY--DGFILSAGT 273 (351)
Q Consensus 212 ~~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~ 273 (351)
.+++|+|+ ++ +|++|+.|+.|++||++.... ....+.+|...|.+++|+|++ ..+|++++.
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEECCCC------------CC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred ceEeecCCcccccccCCCCCCcc-eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 99999997 34 899999999999999986332 456788999999999999984 379999999
Q ss_pred CCeEEEEEcCCCCCCCCCCcccccCCcccccccceee--ccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 274 DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY--SDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 274 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
|++|++||++.... ......+ ..|...|.+++|+|+++ +|++++.|+.|++|+..
T Consensus 228 D~~v~iWd~~~~~~----------------~~~~~~~~~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 228 DRTCIIWTQDNEQG----------------PWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSCEEEEEESSTTS----------------CCEEEESSSSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEEC
T ss_pred CCcEEEEEeCCCCC----------------ccceeeeecccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEEC
Confidence 99999999976110 0011122 46778899999999999 89999999999999976
No 24
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=280.06 Aligned_cols=314 Identities=16% Similarity=0.194 Sum_probs=235.0
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCC---CCceEEEEeecCCcc
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF---DQRIFSTVFSTGESY 91 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~---~~~l~~~~~~~~~d~ 91 (351)
....+..+.++|+..++++.......++.+.+|++.... .......+|...|.+++|+|+ +..|+++ +.|+
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~----~~dg 90 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD--LKLLREIEKAKPIKCGTFGATSLQQRYLATG----DFGG 90 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS--EEEEEEEEESSCEEEEECTTCCTTTCCEEEE----ETTS
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc--ccceeeecccCcEEEEEEcCCCCCCceEEEe----cCCC
Confidence 345677888899887776543222247899999998643 333444589999999999998 5777774 6899
Q ss_pred eEEEEEcccccCCCCCCcce-eeeeeeccccceeEEEe------cCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccc
Q 018697 92 GAAIWQIPELYGQLNSPQLE-RIAALDAHVGKINCVLW------WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS 164 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~------~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 164 (351)
.|++|++. ..+ .+..+.+|...|.+++| +|+++. +++++.|+.|++||+.++...........
T Consensus 91 ~i~iwd~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 91 NLHIWNLE---------APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPE-IVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp CEEEECTT---------SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCE-EEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred eEEEEeCC---------CCCccEEEEEecccceEEEeeccccccCCCccE-EEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 99999998 344 77888899999999954 677873 67778999999999997653333333222
Q ss_pred cCcccceeeeE----ECCCCCcEEEeecCCeEEEEEcccCCcCceeecce-eEEEEcCC---CCCcEEEEecCCCeEEEE
Q 018697 165 SGMLHYLSGGA----WDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDT---KKKHLLVTAADESGIHLW 236 (351)
Q Consensus 165 ~~~~~~v~~~~----~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~---~~~~~l~~~~~dg~i~i~ 236 (351)
..+...+.+++ |+|+++.+++++.|+.|++||+++++......... +.+++|+| ++. ++++++.||.|++|
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~ 239 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVF 239 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEE
T ss_pred CCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEE
Confidence 22244788887 78999999999999999999999887654444333 99999999 787 79999999999999
Q ss_pred ecccCCcceeEee-----CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeec
Q 018697 237 DLRMLKAPIQELP-----GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS 311 (351)
Q Consensus 237 d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (351)
|++. .+++..+. +|...|++++|+|+++.+|++++.||.|++||++.....................+++..+.
T Consensus 240 d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 318 (357)
T 3i2n_A 240 DMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT 318 (357)
T ss_dssp EEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE
T ss_pred eCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc
Confidence 9987 44554444 89999999999999933899999999999999986432211100000000001135677888
Q ss_pred cccceEEEEEeCCCCCceEE-EeeeCCeEEEeecCcc
Q 018697 312 DYEDSVYGLAWSSREPWIFA-SLSYDGRVVVESVKPF 347 (351)
Q Consensus 312 ~~~~~v~~~~~~~~~~~~l~-s~~~dg~v~vw~~~~~ 347 (351)
.|...|++++|+|+++ +|+ +++.|+.|++|++.+.
T Consensus 319 ~~~~~v~~~~~s~~~~-~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 319 LSTQPISSLDWSPDKR-GLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp CCSSCEEEEEECSSST-TEEEEEETTSEEEEEEECC-
T ss_pred cCCCCeeEEEEcCCCC-eEEEEecCCCcEEEEECCCc
Confidence 9999999999999999 565 8999999999999864
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.9e-39 Score=298.69 Aligned_cols=296 Identities=14% Similarity=0.160 Sum_probs=230.0
Q ss_pred eeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEc
Q 018697 19 ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (351)
...+.++|++..++.+. ++.+.+|++.... ....+.+|...|.+++|+|++++|+++ +.|++|+|||+
T Consensus 21 ~~~~~~spdg~~l~~~~-----~~~v~l~~~~~~~---~~~~~~~h~~~v~~~~~spdg~~lasg----~~d~~v~lWd~ 88 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCN-----GTSVYTVPVGSLT---DTEIYTEHSHQTTVAKTSPSGYYCASG----DVHGNVRIWDT 88 (611)
T ss_dssp CCCCEECTTSSEEEEEE-----TTEEEEEETTCSS---CCEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEEEEES
T ss_pred eeEEeeCCCCCEEEeCC-----CCEEEEecCCCcc---cCeEecCCCCceEEEEECCCCcEEEEE----eCCCCEEEeEC
Confidence 44566789998888764 4689999886432 234567899999999999999998885 78999999998
Q ss_pred ccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecC----CcEEEEEcCCCCCCcccccccccCcccceeee
Q 018697 99 PELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (351)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (351)
.. ........+..|.++|.+++|+|+++. +++++.+ +.|++||.. .... ...+|...|.++
T Consensus 89 ~~-------~~~~~~~~~~~~~~~v~~v~fs~dg~~-l~~~~~~~~~~~~v~~wd~~--~~~~-----~l~gh~~~v~~v 153 (611)
T 1nr0_A 89 TQ-------TTHILKTTIPVFSGPVKDISWDSESKR-IAAVGEGRERFGHVFLFDTG--TSNG-----NLTGQARAMNSV 153 (611)
T ss_dssp SS-------TTCCEEEEEECSSSCEEEEEECTTSCE-EEEEECCSSCSEEEEETTTC--CBCB-----CCCCCSSCEEEE
T ss_pred CC-------CcceeeEeecccCCceEEEEECCCCCE-EEEEECCCCceeEEEEeeCC--CCcc-----eecCCCCCceEE
Confidence 62 123445678899999999999999995 4444433 467888743 2221 234678899999
Q ss_pred EECCCCCc-EEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee-
Q 018697 175 AWDPHDVN-AVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP- 249 (351)
Q Consensus 175 ~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~- 249 (351)
+|+|+++. |++++.|++|++||.++++....+. +| |.+++|+|+++ +|++++.|++|++||+++ ++.+..+.
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~-g~~~~~~~~ 230 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVD-GTKTGVFED 230 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-CCEEEECBC
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-cccCceEEEEECCCCC-EEEEEECCCcEEEEECCC-CcEeeeecc
Confidence 99999875 8999999999999998877766665 55 99999999998 899999999999999987 55666663
Q ss_pred ------CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcc---------------------cc---cCC
Q 018697 250 ------GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSES---------------------LV---ESP 299 (351)
Q Consensus 250 ------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------------------~~---~~~ 299 (351)
+|...|.+++|+|++ .+|++++.|++|++||+++.......... .+ ..+
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~ 309 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 309 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEE
T ss_pred ccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEE
Confidence 799999999999999 99999999999999999864221100000 00 000
Q ss_pred cccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 300 NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+...+.+...+.+|...|++++|+|+++ +|++++.|+.|++||+.+
T Consensus 310 ~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 310 NPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDIST 355 (611)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred eCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCC
Confidence 0111234556678999999999999999 899999999999999875
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.4e-39 Score=277.53 Aligned_cols=251 Identities=17% Similarity=0.209 Sum_probs=213.4
Q ss_pred EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEE
Q 018697 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 58 ~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 137 (351)
...+.+|.+.|++++|+|+++.|+++ +.|++|+|||.. ..+....+..|...|.+++|+|++.. ++
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~----s~Dg~v~vWd~~---------~~~~~~~~~~~~~~v~~~~~sp~g~~-la 122 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSS----SQDGKVIVWDSF---------TTNKEHAVTMPCTWVMACAYAPSGCA-IA 122 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEE----ETTSEEEEEETT---------TCCEEEEEECSSSCCCEEEECTTSSE-EE
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEE----eCCCeEEEEECC---------CCCcceEEecCCCCEEEEEECCCCCE-EE
Confidence 45678999999999999999888885 799999999987 55677788889999999999999984 66
Q ss_pred EEecCCcEEEEEcCCCCCCcc-cccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEE
Q 018697 138 VSIDEENIFLWSLDCSNKNAQ-VQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRN 213 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~ 213 (351)
+++.|+.+++|++........ .......+|...|.+++|+|++..|++++.|++|++||+++++.+..+. +| +.+
T Consensus 123 sg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~ 201 (354)
T 2pbi_B 123 CGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC 201 (354)
T ss_dssp EESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEE
T ss_pred EeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEE
Confidence 668899999999875322111 1122234677899999999999999999999999999999998887776 44 899
Q ss_pred EEcCCC--CCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCC
Q 018697 214 VDYDTK--KKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELP 291 (351)
Q Consensus 214 ~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 291 (351)
++|+|+ +. +|++|+.|+.|++||+++ ++++..+.+|...|++++|+|++ .+|++++.|++|++||++.
T Consensus 202 ~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~------- 271 (354)
T 2pbi_B 202 LDLAPSETGN-TFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSG-DAFASGSDDATCRLYDLRA------- 271 (354)
T ss_dssp EEECCCSSCC-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT-------
T ss_pred EEEEeCCCCC-EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEECCC-------
Confidence 999874 55 899999999999999998 67888999999999999999999 9999999999999999987
Q ss_pred CcccccCCcccccccceeecc--ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 292 SESLVESPNQRANSLLNSYSD--YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
...+..+.. +...+.+++|+|++. +|++++.|+.|++||+.+
T Consensus 272 ------------~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 272 ------------DREVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp ------------TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred ------------CcEEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCC
Confidence 555555543 334689999999999 899999999999999864
No 27
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-40 Score=293.25 Aligned_cols=328 Identities=9% Similarity=0.041 Sum_probs=227.6
Q ss_pred cceeeeccccceeEeeeecCCCC------cceEEEeeee---------------eCCCCEEEEEEeCCCCCeEE-EEeee
Q 018697 5 SSGIGYGLKYQARCISDVKADTD------HTSFLTGTLS---------------LKEENEVHLLRLSSGGTELI-CEGLF 62 (351)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~---------------~~~~~~i~~~~~~~~~~~~~-~~~~~ 62 (351)
..+..|........+.+.+..+. ...+++|+.. ...++.|++|++........ ...+.
T Consensus 125 r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~ 204 (524)
T 2j04_B 125 RRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV 204 (524)
T ss_dssp SCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEE
T ss_pred cceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEE
Confidence 33445555444555555554311 2778887632 23568899999876543221 23355
Q ss_pred cCCcceeeeeeCCC------CCceEEEEeecCCcceEEEEEcccccCCCCC--CcceeeeeeeccccceeEEEecCCCCC
Q 018697 63 SHPNEIWDLSSCPF------DQRIFSTVFSTGESYGAAIWQIPELYGQLNS--PQLERIAALDAHVGKINCVLWWSSGRH 134 (351)
Q Consensus 63 ~h~~~v~~i~~~~~------~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~ 134 (351)
.|.+.|.+++|+|+ +..|+++ +.|++|+|||+......... ....+...+.+|...|++++|++++
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~----s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-- 278 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFV----SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-- 278 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEE----ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEE----ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--
Confidence 67899999999997 3455554 78999999999732110000 0012345678899999999999865
Q ss_pred cEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeee--EECCCC-CcEEEeecCCeEEEEEcccCCcCceeecce-
Q 018697 135 DKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG--AWDPHD-VNAVAATCESSVQFWDLRSMGKTNSIEHAH- 210 (351)
Q Consensus 135 ~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~- 210 (351)
.+++++.||+|++||+.++..... ...+|...|.++ .|+|++ ..|++++.|++|++||++++++...+. +|
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~----~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~ 353 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSF----YDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRF 353 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSE----EEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EEC
T ss_pred eEEEEeCCCEEEEEECCCCCCceE----EeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-ccc
Confidence 377889999999999986533222 123677799999 578887 789999999999999999887666554 22
Q ss_pred ----eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCC
Q 018697 211 ----VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSN 286 (351)
Q Consensus 211 ----v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 286 (351)
+.+++|+|+++ .+++++.|++|++||++. ...+..+.+|...|++++|+|++ .+|++|+.|++|++||+....
T Consensus 354 ~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g-~~l~Sgs~Dgtv~lwd~~~~~ 430 (524)
T 2j04_B 354 RGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLH-PMVLAGSADGSLIITNAARRL 430 (524)
T ss_dssp SCCSCCCEEEETTTT-EEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSC-CBCEEEETTTEEECCBSCSST
T ss_pred ccCcccceEeCCCcC-eEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCC-CeEEEEECCCEEEEEechHhh
Confidence 67899999998 789999999999999997 55677888999999999999999 899999999999999976431
Q ss_pred CCC-C---------CCcccccCCcc---------------cccccceeeccccceEEEEEeCCCCC--ceEEEeeeCCeE
Q 018697 287 HDE-L---------PSESLVESPNQ---------------RANSLLNSYSDYEDSVYGLAWSSREP--WIFASLSYDGRV 339 (351)
Q Consensus 287 ~~~-~---------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~dg~v 339 (351)
... . ....-..++.. ..+.++..+.+|...|++++|+|+++ ..+|+|+.||.|
T Consensus 431 ~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~v 510 (524)
T 2j04_B 431 LHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLL 510 (524)
T ss_dssp TTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEE
T ss_pred ccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceE
Confidence 110 0 00011112211 12456777888999999999999953 279999999999
Q ss_pred EEeecCc
Q 018697 340 VVESVKP 346 (351)
Q Consensus 340 ~vw~~~~ 346 (351)
+||++.-
T Consensus 511 rlw~l~~ 517 (524)
T 2j04_B 511 TLEYLSL 517 (524)
T ss_dssp EEEECSC
T ss_pred EEEEccc
Confidence 9999863
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.1e-40 Score=285.56 Aligned_cols=257 Identities=16% Similarity=0.254 Sum_probs=214.8
Q ss_pred eEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCC
Q 018697 55 ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRH 134 (351)
Q Consensus 55 ~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 134 (351)
......+.+|.+.|++++|+|+++.|+++ +.|++|+|||+. ..+....+..|...|.+++|+|+++.
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~----s~D~~v~iWd~~---------~~~~~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSA----SQDGRLIVWNAL---------TSQKTHAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEE----ETTSEEEEEETT---------TTEEEEEEECCCTTCCCCEECTTSSE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEE----eCCCeEEEEECC---------CCccceEEecCCCCEEEEEECCCCCE
Confidence 34457788999999999999999999885 799999999988 66788889999999999999999984
Q ss_pred cEEEEecCCcEEEEEcCCCCCCc--ccccccccCcccceeeeEECCCC-CcEEEeecCCeEEEEEcccCCcCceee----
Q 018697 135 DKLVSIDEENIFLWSLDCSNKNA--QVQSKQSSGMLHYLSGGAWDPHD-VNAVAATCESSVQFWDLRSMGKTNSIE---- 207 (351)
Q Consensus 135 ~~~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~---- 207 (351)
+++++.|+.|++|++.+..... ........+|...+.++.|.|++ ..|++++.|++|++||+++++.+..+.
T Consensus 123 -las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~ 201 (380)
T 3iz6_a 123 -VACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP 201 (380)
T ss_dssp -EEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS
T ss_pred -EEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC
Confidence 6666899999999997532111 11222345788899999999975 468999999999999999988766552
Q ss_pred cce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 208 HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 208 ~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
.+| +.+++|+|.+..++++|+.|+.|++||++....++..+.+|...|++++|+|++ .+|++++.|++|++||++.
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTS-SEEEEECSSSCEEEEETTT
T ss_pred CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCC-CeEEEEcCCCeEEEEECCC
Confidence 234 999999874434899999999999999986567888999999999999999999 9999999999999999998
Q ss_pred CCCCCCCCcccccCCcccccccceeecccc-------ceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 285 SNHDELPSESLVESPNQRANSLLNSYSDYE-------DSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+.++..+..+. ..|++++|+|+|+ +|++++.||.|++||+..
T Consensus 281 -------------------~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 281 -------------------GHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp -------------------TEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTT
T ss_pred -------------------CcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCC
Confidence 66666554432 3489999999999 899999999999999753
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.1e-39 Score=293.89 Aligned_cols=270 Identities=23% Similarity=0.388 Sum_probs=229.1
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEE
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQ 97 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~ 97 (351)
.+..+.++|+...++.+. .++.+++|++... ....+.+|...|.+++|+|+++.|+++ +.|+.|++|+
T Consensus 305 ~v~~~~~~~~~~~l~t~~----~d~~i~~w~~~~~----~~~~~~~~~~~v~~~~~s~~g~~l~~~----~~dg~v~~~~ 372 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASAS----DDKTVKLWNRNGQ----HLQTLTGHSSSVWGVAFSPDGQTIASA----SDDKTVKLWN 372 (577)
T ss_dssp CEEEEEECTTSSEEEEEE----TTSCEEEEETTSC----EEEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEEEEE
T ss_pred CeEEEEECCCCCEEEEEe----CCCeEEEEeCCCC----eeEEEeCCCCCEEEEEECCCCCEEEEE----eCCCEEEEEc
Confidence 345566777777777654 5788999986543 235567899999999999999998875 6899999999
Q ss_pred cccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEEC
Q 018697 98 IPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD 177 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 177 (351)
.. .+.+..+..|...|.+++|+|+++. +++++.|+.|++||... . .. ....+|...|.+++|+
T Consensus 373 ~~----------~~~~~~~~~~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~~~~-~-~~----~~~~~~~~~v~~~~~s 435 (577)
T 2ymu_A 373 RN----------GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNG-Q-LL----QTLTGHSSSVWGVAFS 435 (577)
T ss_dssp TT----------CCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECTTC-C-EE----EEEECCSSCEEEEEEC
T ss_pred CC----------CCEEEEecCCCCCeEEEEECCCCCE-EEEEeCCCEEEEEeCCC-C-EE----EEecCCCCCeEEEEEC
Confidence 64 4667788899999999999999995 67778899999999652 2 11 1233567799999999
Q ss_pred CCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCc
Q 018697 178 PHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHW 254 (351)
Q Consensus 178 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 254 (351)
|++++|++++.|+.|++||+. ++.+..+. +| +.+++|+|+++ +|++++.|+.|++||.. ++.+..+.+|...
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~-~~~~~v~~~~~spd~~-~las~~~d~~i~iw~~~--~~~~~~~~~h~~~ 510 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNRN-GQLLQTLT-GHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN--GQLLQTLTGHSSS 510 (577)
T ss_dssp TTSSEEEEEETTSEEEEEETT-SCEEEEEE-CCSSCEEEEEECTTSC-EEEEEETTSEEEEEETT--SCEEEEEECCSSC
T ss_pred CCCCEEEEEcCCCEEEEEECC-CCEEEEEc-CCCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcCC--CCEEEEEeCCCCC
Confidence 999999999999999999964 45555555 34 99999999998 89999999999999964 6688999999999
Q ss_pred eeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEee
Q 018697 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 334 (351)
|++++|+|++ ++|++++.|+.|++||. . ++++..+.+|...|++++|+|+++ +|++++
T Consensus 511 v~~l~~s~dg-~~l~s~~~dg~v~lwd~-~-------------------~~~~~~~~~h~~~v~~~~fs~dg~-~l~s~~ 568 (577)
T 2ymu_A 511 VRGVAFSPDG-QTIASASDDKTVKLWNR-N-------------------GQLLQTLTGHSSSVWGVAFSPDGQ-TIASAS 568 (577)
T ss_dssp EEEEEECTTS-SCEEEEETTSEEEEECT-T-------------------SCEEEEEECCSSCEEEEEECTTSS-CEEEEE
T ss_pred EEEEEEcCCC-CEEEEEECcCEEEEEeC-C-------------------CCEEEEEcCCCCCEEEEEEcCCCC-EEEEEe
Confidence 9999999999 99999999999999996 3 678889999999999999999999 899999
Q ss_pred eCCeEEEee
Q 018697 335 YDGRVVVES 343 (351)
Q Consensus 335 ~dg~v~vw~ 343 (351)
.|+.|++||
T Consensus 569 ~D~~i~~Wd 577 (577)
T 2ymu_A 569 SDKTVKLWN 577 (577)
T ss_dssp TTSCEEEEC
T ss_pred CCCEEEEeC
Confidence 999999997
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=275.98 Aligned_cols=267 Identities=18% Similarity=0.294 Sum_probs=208.0
Q ss_pred EEEeeecCCc-ceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceee-eeeeccccceeEEEecCCCCC
Q 018697 57 ICEGLFSHPN-EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERI-AALDAHVGKINCVLWWSSGRH 134 (351)
Q Consensus 57 ~~~~~~~h~~-~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~ 134 (351)
....+.+|.+ .|++++|+|+++.|+++ +.|++|+||++.. ...... ....+|...|.+++|+|+++.
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~----~~D~~i~iw~~~~-------~~~~~~~~~~~~h~~~v~~~~~sp~g~~ 75 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASC----GGDRRIRIWGTEG-------DSWICKSVLSEGHQRTVRKVAWSPCGNY 75 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEE----ETTSCEEEEEEET-------TEEEEEEEECSSCSSCEEEEEECTTSSE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEE----cCCCeEEEEEcCC-------CcceeeeeeccccCCcEEEEEECCCCCE
Confidence 3466778987 99999999999998885 7999999999872 111122 223689999999999999984
Q ss_pred cEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCc---eeecce-
Q 018697 135 DKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN---SIEHAH- 210 (351)
Q Consensus 135 ~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~- 210 (351)
+++++.|++|++|++...... ......+|...|.+++|+|++++|++++.|+.|++||++++.... .+. .|
T Consensus 76 -l~s~s~D~~v~iw~~~~~~~~---~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~ 150 (345)
T 3fm0_A 76 -LASASFDATTCIWKKNQDDFE---CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-SHT 150 (345)
T ss_dssp -EEEEETTSCEEEEEECCC-EE---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-CCC
T ss_pred -EEEEECCCcEEEEEccCCCeE---EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-CcC
Confidence 667789999999999854211 112334678899999999999999999999999999998765322 222 44
Q ss_pred --eEEEEcCCCCCcEEEEecCCCeEEEEecccCC-cceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCC
Q 018697 211 --VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK-APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNH 287 (351)
Q Consensus 211 --v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 287 (351)
|.+++|+|++. +|++++.|+.|++||.+... .+...+.+|...|++++|+|++ .+|++++.|++|++||......
T Consensus 151 ~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~ 228 (345)
T 3fm0_A 151 QDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGN 228 (345)
T ss_dssp SCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEECTTC
T ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCC-CEEEEEeCCCeEEEeccccCCC
Confidence 99999999998 89999999999999998622 2456788999999999999999 9999999999999999865322
Q ss_pred CCCCCcccccCCcccccccceeecc-ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 288 DELPSESLVESPNQRANSLLNSYSD-YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
....... .......++..+.+ |...|.+++|+|++. .|++++.|+.|++|+...
T Consensus 229 ~~~~~~~----~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 229 EQGVACS----GSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDP 283 (345)
T ss_dssp TTCCCCC-------CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECT
T ss_pred Cccceee----ccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCC
Confidence 1111000 00011344555554 888999999999998 899999999999999864
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4e-39 Score=296.57 Aligned_cols=286 Identities=13% Similarity=0.144 Sum_probs=232.3
Q ss_pred eeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEE
Q 018697 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAI 95 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~v 95 (351)
...+..+.++|++..++.|. .++.|++|++..... .....+.+|.+.|.+++|+|+++.|+++......++.|++
T Consensus 59 ~~~v~~~~~spdg~~lasg~----~d~~v~lWd~~~~~~-~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 59 SHQTTVAKTSPSGYYCASGD----VHGNVRIWDTTQTTH-ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEE----TTSEEEEEESSSTTC-CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred CCceEEEEECCCCcEEEEEe----CCCCEEEeECCCCcc-eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence 34567788899998888875 589999999865333 2335677899999999999999999887311111257888
Q ss_pred EEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeE
Q 018697 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGA 175 (351)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 175 (351)
||.. .....+.+|...|.+++|+|++...+++++.|++|++||..+... .....+|...|.+++
T Consensus 134 wd~~-----------~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~-----~~~l~~H~~~V~~v~ 197 (611)
T 1nr0_A 134 FDTG-----------TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF-----KSTFGEHTKFVHSVR 197 (611)
T ss_dssp TTTC-----------CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE-----EEEECCCSSCEEEEE
T ss_pred eeCC-----------CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE-----eeeeccccCceEEEE
Confidence 8754 445678899999999999999986577779999999999875321 123346888999999
Q ss_pred ECCCCCcEEEeecCCeEEEEEcccCCcCceeec------ce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcc--
Q 018697 176 WDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH------AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP-- 244 (351)
Q Consensus 176 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-- 244 (351)
|+|++++|++++.|+.|++||+.+++....+.. +| |.+++|+|+++ +|++++.|++|++||+++ .+.
T Consensus 198 fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~-~~~~~ 275 (611)
T 1nr0_A 198 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVAT-LKVEK 275 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-TEEEE
T ss_pred ECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCC-Cceee
Confidence 999999999999999999999998887666632 45 99999999998 899999999999999875 322
Q ss_pred -----------------------------------------eeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcC
Q 018697 245 -----------------------------------------IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVS 283 (351)
Q Consensus 245 -----------------------------------------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 283 (351)
...+.+|...|++++|+|++ .+|++++.|++|++||+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 276 TIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDIS 354 (611)
T ss_dssp EEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETT
T ss_pred eecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECC
Confidence 23445799999999999999 999999999999999999
Q ss_pred CCCCCCCCCcccccCCcccccccceee-ccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 284 TSNHDELPSESLVESPNQRANSLLNSY-SDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
. +.....+ ..|...|.+++|++++ .+++++.|+.+++|++..
T Consensus 355 ~-------------------~~~~~~~~~~h~~~v~~~~~s~~~--~l~s~s~d~~v~~w~~~~ 397 (611)
T 1nr0_A 355 T-------------------GISNRVFPDVHATMITGIKTTSKG--DLFTVSWDDHLKVVPAGG 397 (611)
T ss_dssp T-------------------CCEEECSSCSCSSCEEEEEECTTS--CEEEEETTTEEEEECSSS
T ss_pred C-------------------CceeeecccCCcceEEEEEECCCC--cEEEEEcCCceEEeecCC
Confidence 8 5555554 5788999999999876 488999999999999764
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.3e-39 Score=298.97 Aligned_cols=289 Identities=16% Similarity=0.272 Sum_probs=229.7
Q ss_pred ccceeEeeeecCCCCcce-EEEeeeeeCCCCEEEEEEeCCCCC--eEEEEeeecCCcceeeeeeCCCCCceEEEEeecCC
Q 018697 13 KYQARCISDVKADTDHTS-FLTGTLSLKEENEVHLLRLSSGGT--ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE 89 (351)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~ 89 (351)
+.+...|..+.++++... ++.| ..++.|++|++..... ......+.+|...|.+++|+|+++.|+++ +.
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~----s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sg----s~ 450 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSA----SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSG----SW 450 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEE----ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEE----ET
T ss_pred ccCCceeEEEEecCCCCCEEEEE----eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEE----eC
Confidence 334566777888876644 4444 3689999999986543 23456788999999999999999988885 79
Q ss_pred cceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccc
Q 018697 90 SYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
|++|+|||+. .......+.+|...|.+++|+|++.. +++++.|++|++||+... ..........+|..
T Consensus 451 Dg~v~vwd~~---------~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~--~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 451 DGELRLWDLA---------AGVSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGE--CKYTISEGGEGHRD 518 (694)
T ss_dssp TSEEEEEETT---------TTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSC--EEEEECSSTTSCSS
T ss_pred CCcEEEEECC---------CCcceeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCC--cceeeccCCCCCCC
Confidence 9999999998 66788889999999999999999985 777799999999998642 11222223346778
Q ss_pred ceeeeEECCCC--CcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcc
Q 018697 170 YLSGGAWDPHD--VNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP 244 (351)
Q Consensus 170 ~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 244 (351)
.|.+++|+|++ ..+++++.|+.|++||+++++....+. +| |.+++|+|+++ +|++|+.|+.|++||+++ .+.
T Consensus 519 ~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~-~~~ 595 (694)
T 3dm0_A 519 WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAE-GKK 595 (694)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTT-TEE
T ss_pred cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC-Cce
Confidence 99999999987 568999999999999999888776666 45 99999999998 899999999999999997 656
Q ss_pred eeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc------------
Q 018697 245 IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD------------ 312 (351)
Q Consensus 245 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 312 (351)
+..+. +...|.+++|+|++ .++++++ |+.|++||++. +..+..+..
T Consensus 596 ~~~~~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~-------------------~~~~~~~~~~~~~~~~~~~~~ 653 (694)
T 3dm0_A 596 LYSLE-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLES-------------------KSIVEDLKVDLKAEAEKADNS 653 (694)
T ss_dssp EECCB-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTT-------------------TEEEEEECCCCC---------
T ss_pred EEEec-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCC-------------------CCChhhhcccccccccccccc
Confidence 66665 45689999999998 7776655 66799999987 333333321
Q ss_pred -------ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 313 -------YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 313 -------~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
+...+++++|+|+++ +|++|+.||.|++|++..+
T Consensus 654 ~~~~~~~~~~~~~~l~~spdg~-~l~sgs~Dg~i~iW~i~~~ 694 (694)
T 3dm0_A 654 GPAATKRKVIYCTSLNWSADGS-TLFSGYTDGVIRVWGIGRY 694 (694)
T ss_dssp -------CCCCEEEEEECTTSS-EEEEEETTSEEEEEEC---
T ss_pred ccccCCceeEEeeeEEEcCCCC-EEEEEcCCCeEEEEeccCC
Confidence 122478999999999 8999999999999998753
No 33
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.6e-39 Score=275.32 Aligned_cols=255 Identities=18% Similarity=0.305 Sum_probs=197.8
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDK 136 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~ 136 (351)
..+.+|.+.|++++|+|+++.|+++ +.|++|+|||+.. .....+..+.+|..+|.+++|+++ +. ++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasg----s~D~~v~lwd~~~-------~~~~~~~~l~gH~~~V~~v~~~~~~~~~-~l 74 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATC----SSDRSVKIFDVRN-------GGQILIADLRGHEGPVWQVAWAHPMYGN-IL 74 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEE----ETTTEEEEEEEET-------TEEEEEEEEECCSSCEEEEEECCGGGSS-CE
T ss_pred eecccccCeEEEeeEcCCCCEEEEE----eCCCeEEEEEecC-------CCcEEEEEEcCCCccEEEEEeCCCCCCC-EE
Confidence 4456899999999999999998885 7999999999972 122456788999999999999864 55 47
Q ss_pred EEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCC--CCcEEEeecCCeEEEEEcccCCcC--ceeecce--
Q 018697 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKT--NSIEHAH-- 210 (351)
Q Consensus 137 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~-- 210 (351)
++++.|++|++||+.++..... ....+|...|.+++|+|+ +.+|++++.|+.|++||++.+... ......|
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~---~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKS---HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEE---EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred EEEECCCEEEEEECCCCcceEE---EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 7779999999999986432111 123467779999999998 778999999999999999876321 1222244
Q ss_pred -eEEEEcCCCC-----------------CcEEEEecCCCeEEEEecccCC--cceeEeeCCCCceeEEEecCCC---CCe
Q 018697 211 -VRNVDYDTKK-----------------KHLLVTAADESGIHLWDLRMLK--APIQELPGHTHWTWAVCCNPEY---DGF 267 (351)
Q Consensus 211 -v~~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~---~~~ 267 (351)
+.+++|+|+. . +|++|+.|+.|++||++... +++..+.+|...|.+++|+|++ ..+
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 8899999973 4 79999999999999997532 3567788999999999999985 368
Q ss_pred EEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 268 ILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 268 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
|++++.|++|++||+...... ......+..|...|++++|+|+++ +|++++.|+.|++|+..
T Consensus 231 las~s~D~~v~iw~~~~~~~~---------------~~~~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSN---------------TWSPKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCC---------------CCBCCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEEccCcccc---------------chhhhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 999999999999999751100 112234566888999999999998 89999999999999975
No 34
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.3e-38 Score=268.59 Aligned_cols=252 Identities=15% Similarity=0.254 Sum_probs=206.1
Q ss_pred EEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCc
Q 018697 56 LICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHD 135 (351)
Q Consensus 56 ~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 135 (351)
.....+.+|.+.|.+++|+|++..++++ ++.|++|++|++.... .....++..+.+|...|.+++|+|++..
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s---~s~D~~v~~W~~~~~~----~~~~~~~~~~~~h~~~v~~~~~s~dg~~- 79 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLS---ASRDKTLISWKLTGDD----QKFGVPVRSFKGHSHIVQDCTLTADGAY- 79 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEE---EETTSEEEEEEEEEET----TEEEEEEEEEECCSSCEEEEEECTTSSE-
T ss_pred EEEEEEccccceEEEEEccCCCccEEEE---ecCCccEEEecCCCCC----ccccccceEEeCCcccEEEEEECCCCCE-
Confidence 3446678999999999999977544444 4799999999986210 0123567788999999999999999984
Q ss_pred EEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eE
Q 018697 136 KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VR 212 (351)
Q Consensus 136 ~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~ 212 (351)
+++++.|++|++||+.++.... ...+|...|.+++|+|++..+++++.|+.|++||++. +.+..+. +| +.
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~-~h~~~v~ 152 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQ-----RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLL-GHNDWVS 152 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEE-----EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEEC-CCSSCEE
T ss_pred EEEEeCCCEEEEEECCCCCeeE-----EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEe-ccCCcEE
Confidence 6777899999999998754322 2346777999999999999999999999999999974 4444444 34 99
Q ss_pred EEEcCCCCC-----cEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCC
Q 018697 213 NVDYDTKKK-----HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNH 287 (351)
Q Consensus 213 ~~~~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 287 (351)
+++|+|... .++++++.|+.|++||++. .+....+.+|...|.+++|+|++ .+|++++.|+.|++||+..
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~--- 227 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDG-TLIASAGKDGEIMLWNLAA--- 227 (319)
T ss_dssp EEEECCC------CCEEEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTS-SEEEEEETTCEEEEEETTT---
T ss_pred EEEEccCCCCCCCccEEEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC---
Confidence 999998532 2799999999999999987 66778888999999999999999 9999999999999999998
Q ss_pred CCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 288 DELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
.+++..+..+ ..|.+++|+|++. ++++++ +..+++|+++.
T Consensus 228 ----------------~~~~~~~~~~-~~v~~~~~sp~~~-~la~~~-~~~i~v~~~~~ 267 (319)
T 3frx_A 228 ----------------KKAMYTLSAQ-DEVFSLAFSPNRY-WLAAAT-ATGIKVFSLDP 267 (319)
T ss_dssp ----------------TEEEEEEECC-SCEEEEEECSSSS-EEEEEE-TTEEEEEEETT
T ss_pred ----------------CcEEEEecCC-CcEEEEEEcCCCC-EEEEEc-CCCcEEEEeCc
Confidence 7778788655 5699999999998 677665 55699999865
No 35
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-38 Score=269.64 Aligned_cols=259 Identities=18% Similarity=0.266 Sum_probs=195.7
Q ss_pred EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee-ec-cccceeEEEecCCCCCc
Q 018697 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL-DA-HVGKINCVLWWSSGRHD 135 (351)
Q Consensus 58 ~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~~ 135 (351)
...+.+|.+.|++++|+|+ .|++ ++.|++|++|++.. ........+ .. |...|.+++|+|+++ +
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las----~~~D~~i~lw~~~~-------~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~ 72 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILAT----GSTDRKIKLVSVKY-------DDFTLIDVLDETAHKKAIRSVAWRPHTS-L 72 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEE----EESSSCEEEEECSS-------SCCEEEEEECTTCCCSCEEEEEECTTSS-E
T ss_pred ceeeccCCCceeeeccCCC--EEEE----EcCCCEEEEEEecC-------CCeEEEEEEecCCccCCEEEEEECCCCC-E
Confidence 4667899999999999987 5555 47999999999872 123444555 34 999999999999998 3
Q ss_pred EEEEecCCcEEEEEcCCCCCC--cccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccC-C---cCceeecc
Q 018697 136 KLVSIDEENIFLWSLDCSNKN--AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM-G---KTNSIEHA 209 (351)
Q Consensus 136 ~~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~---~~~~~~~~ 209 (351)
+++++.|++|++||+...... .........+|...|.+++|+|++++|++++.|+.|++||++.. . ++..+. +
T Consensus 73 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~ 151 (330)
T 2hes_X 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-E 151 (330)
T ss_dssp EEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-C
T ss_pred EEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-c
Confidence 666789999999999642211 11112234578889999999999999999999999999999543 2 223333 4
Q ss_pred e---eEEEEcCCCCCcEEEEecCCCeEEEEecccCC-cceeEeeCCCCceeEEEecCC--CCCeEEEeeCCCeEEEEEcC
Q 018697 210 H---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK-APIQELPGHTHWTWAVCCNPE--YDGFILSAGTDSTVNLWLVS 283 (351)
Q Consensus 210 ~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~ 283 (351)
| |.+++|+|++. +|++++.|++|++||.+... +++..+.+|...|.+++|+|+ + .+|++++.|++|++||++
T Consensus 152 h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 152 HSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGV-FRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSS-CEEEEEETTSCEEEEEEE
T ss_pred CCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCe-eEEEEEeCCCeEEEEEec
Confidence 4 99999999998 89999999999999987521 467888999999999999998 5 789999999999999997
Q ss_pred CCCCCCCCCcccccCCcccccccceeecc-ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 284 TSNHDELPSESLVESPNQRANSLLNSYSD-YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
...... .....+...+.. |...|.+++|++++ +|++++.||.|++|++.+
T Consensus 230 ~~~~~~-----------~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 230 GDDEDD-----------QQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EECTTS-----------CEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEET
T ss_pred CCCccc-----------cceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCC
Confidence 621100 000133444544 88999999999764 699999999999999753
No 36
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-37 Score=267.93 Aligned_cols=293 Identities=12% Similarity=0.199 Sum_probs=242.0
Q ss_pred eeeccccceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeec
Q 018697 8 IGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFST 87 (351)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~ 87 (351)
....+..+...+..+.++++...++.|. .++.|.+|++.... ....+.+|...|.+++|+|+++.|+++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~----~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~---- 92 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCS----KDSSASVWYSLNGE---RLGTLDGHTGTIWSIDVDCFTKYCVTG---- 92 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEE----SSSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEE----
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEe----CCCEEEEEeCCCch---hhhhhhhcCCcEEEEEEcCCCCEEEEE----
Confidence 3444555566788888999988888874 57899999987643 345677899999999999999888875
Q ss_pred CCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecC-----CcEEEEEcCCCCCCcccccc
Q 018697 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE-----ENIFLWSLDCSNKNAQVQSK 162 (351)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d-----~~v~iwd~~~~~~~~~~~~~ 162 (351)
+.|+.|++||+. ..+.+..+. |...|.+++|+|++.. +++++.+ +.|++||+............
T Consensus 93 ~~dg~i~iwd~~---------~~~~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 161 (369)
T 3zwl_B 93 SADYSIKLWDVS---------NGQCVATWK-SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKV 161 (369)
T ss_dssp ETTTEEEEEETT---------TCCEEEEEE-CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEE
T ss_pred eCCCeEEEEECC---------CCcEEEEee-cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeeccc
Confidence 689999999998 566777775 8899999999999994 6666667 99999999865433222111
Q ss_pred ------cccCccc--ceeeeEECCCCCcEEEeecCCeEEEEEccc-CCcCceeecce--eEEEEcCCCCCcEEEEecCCC
Q 018697 163 ------QSSGMLH--YLSGGAWDPHDVNAVAATCESSVQFWDLRS-MGKTNSIEHAH--VRNVDYDTKKKHLLVTAADES 231 (351)
Q Consensus 163 ------~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg 231 (351)
....|.. .+.+++|+|+++.+++++.|+.|++||+++ .+....+.... +.+++|+|++. +|++++.|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 240 (369)
T 3zwl_B 162 SEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDT 240 (369)
T ss_dssp CSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred ccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecCCc
Confidence 1112333 899999999999999999999999999998 55555555222 99999999998 799999999
Q ss_pred eEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCC--------------eEEEEEcCCCCCCCCCCccccc
Q 018697 232 GIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS--------------TVNLWLVSTSNHDELPSESLVE 297 (351)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~ 297 (351)
.|++||+++ .+.+..+. +...+..++|+|++ .++++++.++ .+++||...
T Consensus 241 ~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~------------- 304 (369)
T 3zwl_B 241 NSFLVDVST-LQVLKKYE-TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSANEGKFEARFYHKIF------------- 304 (369)
T ss_dssp EEEEEETTT-CCEEEEEE-CSSCEEEEEECSSS-SEEEEEECCC-------------CEEEEEETTT-------------
T ss_pred eEEEEECCC-Cceeeeec-CCCCceeEEecCCC-ceEEEeecCCCceEEEEecCCCcceeEEEecCC-------------
Confidence 999999997 66677776 78899999999999 9999999888 899999998
Q ss_pred CCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++++..+.+|...|++++|+|+++ +|++++.||.|++|++++
T Consensus 305 ------~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 305 ------EEEIGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ------CCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEECH
T ss_pred ------CcchhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECcc
Confidence 888899999999999999999998 899999999999999975
No 37
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.2e-39 Score=278.72 Aligned_cols=300 Identities=10% Similarity=0.046 Sum_probs=219.5
Q ss_pred eeccccceeEeeeecCCCCcceEEEeee---eeCCCCEEEEEEeCCCCCe-------EEEEeeecCCcceeeeeeCCCCC
Q 018697 9 GYGLKYQARCISDVKADTDHTSFLTGTL---SLKEENEVHLLRLSSGGTE-------LICEGLFSHPNEIWDLSSCPFDQ 78 (351)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~i~~~~~~~~~~~-------~~~~~~~~h~~~v~~i~~~~~~~ 78 (351)
.|.+.++ |..+.+.|++..++.|.- ..+-+|.|++|++...... .....+.+|+..|.+++++ +.
T Consensus 10 ~~~~g~P---V~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~ 84 (365)
T 4h5i_A 10 SYNVGYP---AYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KG 84 (365)
T ss_dssp EEECSSC---EEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TT
T ss_pred ecCCCCC---EEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CC
Confidence 4455544 445556678888877642 1234678999999876442 1223456788888888765 44
Q ss_pred ceEEEEee-------cCCcceEEEEEcccccCCCCCCcceeeeee-----eccccceeEEEecCCCCCcEEEE-ecCCcE
Q 018697 79 RIFSTVFS-------TGESYGAAIWQIPELYGQLNSPQLERIAAL-----DAHVGKINCVLWWSSGRHDKLVS-IDEENI 145 (351)
Q Consensus 79 ~l~~~~~~-------~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~~~~-~~d~~v 145 (351)
.+++++.. ++.|+.+++|++.... ...+..... ..+...+.+++|+|||+.+++++ +.|++|
T Consensus 85 ~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i 159 (365)
T 4h5i_A 85 IILVGCNENSTKITQGKGNKHLRKFKYDKVN-----DQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIM 159 (365)
T ss_dssp EEEEECCCCHHHHHHTSCCCCEEEEEEETTT-----TEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEE
T ss_pred EEEEEECCCccEEEEecCCCcEEEEEecCCC-----ceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEE
Confidence 55554311 3568889999987311 112222221 23445689999999999755555 568999
Q ss_pred EEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCcee-ecce---eEEEEcCCCCC
Q 018697 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSI-EHAH---VRNVDYDTKKK 221 (351)
Q Consensus 146 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~---v~~~~~~~~~~ 221 (351)
+|||+.+......+ .|...|.+++|+|+++++++++. +.+++|+..+++..... ...| +.+++|+|++.
T Consensus 160 ~iwd~~~~~~~~~~------~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 160 RIIDPSDLTEKFEI------ETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp EEEETTTTEEEEEE------ECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred EEeECCCCcEEEEe------CCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 99999875443322 24458999999999999888875 45677777766654332 2233 99999999998
Q ss_pred cEEEEecCCC----eEEEEecccCCc---ceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcc
Q 018697 222 HLLVTAADES----GIHLWDLRMLKA---PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSES 294 (351)
Q Consensus 222 ~~l~~~~~dg----~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 294 (351)
++++++.|+ .+++|++..... ....+.+|..+|++++|+|+| .+||+|+.|++|+|||+++
T Consensus 233 -~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~---------- 300 (365)
T 4h5i_A 233 -VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKD---------- 300 (365)
T ss_dssp -EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTT----------
T ss_pred -EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCC----------
Confidence 788887776 688899875322 234567899999999999999 9999999999999999998
Q ss_pred cccCCcccccccceee-ccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 295 LVESPNQRANSLLNSY-SDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 295 ~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++++..+ .+|...|++++|+|||+ +||+++.|++|+||++++.
T Consensus 301 ---------~~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 301 ---------LSMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ---------TEEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTT
T ss_pred ---------CcEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC
Confidence 8888775 78999999999999999 8999999999999999753
No 38
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.2e-37 Score=265.83 Aligned_cols=280 Identities=16% Similarity=0.188 Sum_probs=230.8
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEE--eeecCCcceeeeeeCCCCCceEEEEeecCCcceEEE
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICE--GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAI 95 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~v 95 (351)
.+..+.++++...++.+. ++.+.+|++.......... ...+|...|.+++|+|+++.|+++ +.|+.|++
T Consensus 53 ~v~~~~~~~~~~~l~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~d~~i~~ 123 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG----GEASTLSI 123 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-----BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEE----ESSSEEEE
T ss_pred ceEEEEEecCCcEEEEcC-----CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEE----cCCCcEEE
Confidence 455667778887777663 6899999998654322222 233799999999999999888875 68999999
Q ss_pred EEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeE
Q 018697 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGA 175 (351)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 175 (351)
|++.. ........+..|...|.+++|+|+++. +++++.|+.|++||+.++..... ...|...+.+++
T Consensus 124 ~d~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~v~~~d~~~~~~~~~-----~~~~~~~i~~~~ 190 (337)
T 1gxr_A 124 WDLAA-------PTPRIKAELTSSAPACYALAISPDSKV-CFSCCSDGNIAVWDLHNQTLVRQ-----FQGHTDGASCID 190 (337)
T ss_dssp EECCC-------C--EEEEEEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEE-----ECCCSSCEEEEE
T ss_pred EECCC-------CCcceeeecccCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCCCceeee-----eecccCceEEEE
Confidence 99982 233366778889999999999999884 66778899999999986432222 234666899999
Q ss_pred ECCCCCcEEEeecCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCc
Q 018697 176 WDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHW 254 (351)
Q Consensus 176 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 254 (351)
|+|+++.+++++.|+.|++||+++++....+.... +.+++|+|+++ ++++++.++.|++||++. .+ ...+..|...
T Consensus 191 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~ 267 (337)
T 1gxr_A 191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNK-PD-KYQLHLHESC 267 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTS-SC-EEEECCCSSC
T ss_pred ECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCC-CC-eEEEcCCccc
Confidence 99999999999999999999999988777766444 99999999998 789999999999999986 33 4567789999
Q ss_pred eeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEee
Q 018697 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 334 (351)
|.+++|+|++ .+|++++.|+.|++||+.. ++.+.. ..|...|.+++|+|+++ +|++++
T Consensus 268 v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~-------------------~~~~~~-~~~~~~v~~~~~s~~~~-~l~~~~ 325 (337)
T 1gxr_A 268 VLSLKFAYCG-KWFVSTGKDNLLNAWRTPY-------------------GASIFQ-SKESSSVLSCDISVDDK-YIVTGS 325 (337)
T ss_dssp EEEEEECTTS-SEEEEEETTSEEEEEETTT-------------------CCEEEE-EECSSCEEEEEECTTSC-EEEEEE
T ss_pred eeEEEECCCC-CEEEEecCCCcEEEEECCC-------------------CeEEEE-ecCCCcEEEEEECCCCC-EEEEec
Confidence 9999999999 9999999999999999998 565544 35778899999999998 899999
Q ss_pred eCCeEEEeec
Q 018697 335 YDGRVVVESV 344 (351)
Q Consensus 335 ~dg~v~vw~~ 344 (351)
.||.|++|++
T Consensus 326 ~dg~i~iw~~ 335 (337)
T 1gxr_A 326 GDKKATVYEV 335 (337)
T ss_dssp TTSCEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9999999997
No 39
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.4e-38 Score=276.67 Aligned_cols=289 Identities=15% Similarity=0.191 Sum_probs=233.9
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCC---eEEEEeeecCCcceeeeeeCCC----C---CceEEEE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGT---ELICEGLFSHPNEIWDLSSCPF----D---QRIFSTV 84 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~h~~~v~~i~~~~~----~---~~l~~~~ 84 (351)
....+..+.+++ ..++.|+ .++.|++|++..... ......+.+|...|.+++|+|+ + ..|+++
T Consensus 15 h~~~i~~~~~~~--~~l~s~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~- 87 (397)
T 1sq9_A 15 HDADIFSVSACN--SFTVSCS----GDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT- 87 (397)
T ss_dssp SSSCEEEEEECS--SEEEEEE----TTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE-
T ss_pred hhcCeEEEEecC--CeEEEEc----CCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE-
Confidence 344566666766 5566653 589999999987641 1123556689999999999999 8 788775
Q ss_pred eecCCcceEEEEEcccccCCCCCCccee-----eeeeecc-----ccceeEEEec----CCCCCcEEEEecCCcEEEEEc
Q 018697 85 FSTGESYGAAIWQIPELYGQLNSPQLER-----IAALDAH-----VGKINCVLWW----SSGRHDKLVSIDEENIFLWSL 150 (351)
Q Consensus 85 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~-----~~~~~~h-----~~~v~~~~~~----~~~~~~~~~~~~d~~v~iwd~ 150 (351)
+.|+.|++|++. ..+. ...+..| ...|.+++|+ |++..++++++.|+.|++||+
T Consensus 88 ---~~dg~i~iw~~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 88 ---SFSGDLLFYRIT---------REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp ---ETTSCEEEEEEE---------ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEE
T ss_pred ---cCCCCEEEEEcc---------CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeC
Confidence 689999999998 3343 6777888 5999999999 988832566688999999999
Q ss_pred CC------CCCCc-----cccc--ccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeec-------ce
Q 018697 151 DC------SNKNA-----QVQS--KQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH-------AH 210 (351)
Q Consensus 151 ~~------~~~~~-----~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~ 210 (351)
.+ ..... .+.. .....|...+.+++|+|++ .+++++.|+.|++||+++++.+..+.. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~ 234 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN 234 (397)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCC
T ss_pred CccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCC
Confidence 86 43333 1110 0002356689999999999 999999999999999999888887775 33
Q ss_pred -eEEEEcCCCCCcEEEEecCC---CeEEEEecccCCcceeEeeC-------------CCCceeEEEecCCCCCeEEEeeC
Q 018697 211 -VRNVDYDTKKKHLLVTAADE---SGIHLWDLRMLKAPIQELPG-------------HTHWTWAVCCNPEYDGFILSAGT 273 (351)
Q Consensus 211 -v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~s~~~ 273 (351)
+.+++|+|++. +|++++.| +.|++||+++ .+++..+.. |...|.+++|+|++ .+|++++.
T Consensus 235 ~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~ 311 (397)
T 1sq9_A 235 SIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETLCSAGW 311 (397)
T ss_dssp CEEEEEECSSTT-EEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSS-SEEEEEET
T ss_pred ccceEEECCCCC-EEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCCC-CEEEEEeC
Confidence 99999999998 89999999 9999999997 667888888 99999999999999 99999999
Q ss_pred CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeec------cc---------------cceEEEEEeCCCC------
Q 018697 274 DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS------DY---------------EDSVYGLAWSSRE------ 326 (351)
Q Consensus 274 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~------ 326 (351)
|+.|++||++. ++++..+. .| ...|++++|+|++
T Consensus 312 dg~i~iwd~~~-------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~ 372 (397)
T 1sq9_A 312 DGKLRFWDVKT-------------------KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 372 (397)
T ss_dssp TSEEEEEETTT-------------------TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred CCeEEEEEcCC-------------------CceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence 99999999998 77777777 67 8999999999998
Q ss_pred ----CceEEEeeeCCeEEEeecCc
Q 018697 327 ----PWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 327 ----~~~l~s~~~dg~v~vw~~~~ 346 (351)
. +|++++.||.|++|++++
T Consensus 373 ~~~~~-~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 373 ADLNE-SLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CTTSC-EEEEEETTTEEEEEEEEC
T ss_pred ccccc-eEEEecCCCcEEEEEcCC
Confidence 5 899999999999999864
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5e-38 Score=274.25 Aligned_cols=257 Identities=16% Similarity=0.224 Sum_probs=203.2
Q ss_pred eeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccc------------------c
Q 018697 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV------------------G 121 (351)
Q Consensus 60 ~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~------------------~ 121 (351)
...+|.+.|.+++|+|++++|+++ .++.+++|++. .++.+..+..|. .
T Consensus 59 ~~~~h~~~V~~v~fspdg~~la~g-----~~~~v~i~~~~---------~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 124 (393)
T 1erj_A 59 KSLDHTSVVCCVKFSNDGEYLATG-----CNKTTQVYRVS---------DGSLVARLSDDSAANKDPENLNTSSSPSSDL 124 (393)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEE-----CBSCEEEEETT---------TCCEEEEECC-----------------CCCC
T ss_pred EecCCCCEEEEEEECCCCCEEEEE-----cCCcEEEEEec---------CCCEEEEecCccccccccccccccccCCCce
Confidence 345799999999999999988774 46899999987 445555554432 2
Q ss_pred ceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCC
Q 018697 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG 201 (351)
Q Consensus 122 ~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 201 (351)
.|.+++|+|+++. +++++.|+.|++||+.++.... ...+|...|.+++|+|+++.|++++.|+.|++||+++++
T Consensus 125 ~v~~v~~s~dg~~-l~s~~~d~~i~iwd~~~~~~~~-----~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 125 YIRSVCFSPDGKF-LATGAEDRLIRIWDIENRKIVM-----ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp BEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEE-----EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEEECCCCCE-EEEEcCCCeEEEEECCCCcEEE-----EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 4999999999984 6677899999999998643221 234677799999999999999999999999999999988
Q ss_pred cCceeecce-eEEEEcCC-CCCcEEEEecCCCeEEEEecccCCcceeEe-------eCCCCceeEEEecCCCCCeEEEee
Q 018697 202 KTNSIEHAH-VRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQEL-------PGHTHWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 202 ~~~~~~~~~-v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~s~~ 272 (351)
....+.... +.+++|+| ++. ++++|+.|+.|++||+++ +..+..+ .+|...|.+++|+|++ .+|++++
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s 275 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDG-QSVVSGS 275 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTS-SEEEEEE
T ss_pred eEEEEEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCC-CEEEEEe
Confidence 777766444 99999999 676 899999999999999987 5555555 5789999999999999 9999999
Q ss_pred CCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 273 TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 273 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
.|+.|++||++......... ....+.+...+.+|...|.+++|+|++. +|++++.|+.|++||+.+.
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~-------~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSK-------TPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp TTSEEEEEEC----------------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEEECCCCCCccccc-------CCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECCCC
Confidence 99999999998632111000 0011345667788999999999999998 8999999999999998753
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.8e-38 Score=274.12 Aligned_cols=291 Identities=12% Similarity=0.146 Sum_probs=224.3
Q ss_pred ceeEeeeecCCCC---c-ceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeee--cCCcceeeeeeCCC----CCceEEEE
Q 018697 15 QARCISDVKADTD---H-TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLF--SHPNEIWDLSSCPF----DQRIFSTV 84 (351)
Q Consensus 15 ~~~~~~~~~~~~~---~-~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~~~~----~~~l~~~~ 84 (351)
+...+..+.++|+ . ..++++. .++.|.+|++............. .|...|.+++|+|+ ++.|+++
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~----~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~- 91 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATV----GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA- 91 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEE----ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE-
T ss_pred CCCceEEEEEecccCCCCceEEEEC----CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe-
Confidence 3456677777763 3 3344432 35689999998654322222222 37789999999998 4456664
Q ss_pred eecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecC-CCCCcEEEEecCCcEEEEEcCCCCCCccccccc
Q 018697 85 FSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS-SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ 163 (351)
Q Consensus 85 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~ 163 (351)
+.|+.|++||+. +.+.+..+.+|...|.+++|+| ++. ++++++.|+.|++||+.++....... .
T Consensus 92 ---~~dg~i~v~d~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~--~ 156 (366)
T 3k26_A 92 ---GSRGIIRIINPI---------TMQCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTLVAIFG--G 156 (366)
T ss_dssp ---ETTCEEEEECTT---------TCCEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEEEEEEC--S
T ss_pred ---cCCCEEEEEEch---------hceEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeEEEEec--c
Confidence 789999999998 5678888999999999999999 666 47777889999999998654322221 1
Q ss_pred ccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeec---------------------------ce---eEE
Q 018697 164 SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH---------------------------AH---VRN 213 (351)
Q Consensus 164 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---------------------------~~---v~~ 213 (351)
..+|...|.+++|+|+++.|++++.|+.|++||+++++....+.. .| |.+
T Consensus 157 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 157 VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 135677999999999999999999999999999987654433321 13 899
Q ss_pred EEcCCCCCcEEEEecCCCeEEEEecccCCc-------------ceeEeeCCCCceeEEEecCC--CCCeEEEeeCCCeEE
Q 018697 214 VDYDTKKKHLLVTAADESGIHLWDLRMLKA-------------PIQELPGHTHWTWAVCCNPE--YDGFILSAGTDSTVN 278 (351)
Q Consensus 214 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------------~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~ 278 (351)
++|+ +. ++++++.|+.|++||++.... .+..+..|...|++++|+|+ + .+|++++.||.|+
T Consensus 237 ~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg~i~ 312 (366)
T 3k26_A 237 VRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVGKLY 312 (366)
T ss_dssp EEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTSCEE
T ss_pred EEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCCcEE
Confidence 9998 55 899999999999999986332 36777889999999999999 8 9999999999999
Q ss_pred EEEcCCCCCCCCCCcccccCCcccccccceeeccc--cceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 279 LWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY--EDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 279 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+||+...... ......+..| ...|++++|+|+++ +|++++.||.|++||+.
T Consensus 313 vwd~~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 313 VWDLEVEDPH---------------KAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECCSSSGG---------------GCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC-
T ss_pred EEECCCCCCc---------------cccceEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEec
Confidence 9999871100 1233466676 78999999999998 89999999999999985
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.3e-37 Score=283.46 Aligned_cols=273 Identities=22% Similarity=0.376 Sum_probs=229.2
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEE
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQ 97 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~ 97 (351)
.+..+.+.++...++.++ .++.+++|+.... ....+.+|...|.+++|+|+++.++++ +.|+.|++|+
T Consensus 264 ~v~~v~~~~d~~~l~~~~----~d~~i~~w~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~t~----~~d~~i~~w~ 331 (577)
T 2ymu_A 264 SVNGVAFRPDGQTIASAS----DDKTVKLWNRNGQ----LLQTLTGHSSSVWGVAFSPDGQTIASA----SDDKTVKLWN 331 (577)
T ss_dssp CEEEEEECTTSSEEEEEE----TTSCEEEEETTSC----EEEEECCCSSCEEEEEECTTSSEEEEE----ETTSCEEEEE
T ss_pred CEEEEEEcCCCCEEEEEe----CCCEEEEEeCCCc----EEEEEecCCCCeEEEEECCCCCEEEEE----eCCCeEEEEe
Confidence 455666777887777764 5788888885432 345678999999999999999988875 6899999999
Q ss_pred cccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEEC
Q 018697 98 IPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD 177 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 177 (351)
+. ...+..+..|...|.+++|+|+++. +++++.|+.|++||... . ... ...+|...|.+++|+
T Consensus 332 ~~----------~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~v~~~~~~~-~-~~~----~~~~~~~~v~~~~~s 394 (577)
T 2ymu_A 332 RN----------GQHLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTVKLWNRNG-Q-LLQ----TLTGHSSSVRGVAFS 394 (577)
T ss_dssp TT----------SCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTC-C-EEE----EEECCSSCEEEEEEC
T ss_pred CC----------CCeeEEEeCCCCCEEEEEECCCCCE-EEEEeCCCEEEEEcCCC-C-EEE----EecCCCCCeEEEEEC
Confidence 76 2455677899999999999999994 66668899999999652 2 111 223567799999999
Q ss_pred CCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCc
Q 018697 178 PHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHW 254 (351)
Q Consensus 178 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 254 (351)
|++++|++++.|+.|++||.. ++.+..+. .| |.+++|+|+++ ++++++.|+.|++||.. .+.+..+.+|...
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~~-~~~~~~~~-~~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~ 469 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNRN-GQLLQTLT-GHSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRN--GQLLQTLTGHSSS 469 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTT-CCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTSEEEEEETT--SCEEEEEECCSSC
T ss_pred CCCCEEEEEeCCCEEEEEeCC-CCEEEEec-CCCCCeEEEEECCCCC-EEEEEcCCCEEEEEECC--CCEEEEEcCCCCC
Confidence 999999999999999999964 55555555 34 99999999998 89999999999999975 5678889999999
Q ss_pred eeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEee
Q 018697 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 334 (351)
|.+++|+|++ .+|++++.|+.|++||.. ++++..+.+|...|++++|+|+++ +|++++
T Consensus 470 v~~~~~spd~-~~las~~~d~~i~iw~~~--------------------~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~ 527 (577)
T 2ymu_A 470 VRGVAFSPDG-QTIASASDDKTVKLWNRN--------------------GQLLQTLTGHSSSVRGVAFSPDGQ-TIASAS 527 (577)
T ss_dssp EEEEEECTTS-CEEEEEETTSEEEEEETT--------------------SCEEEEEECCSSCEEEEEECTTSS-CEEEEE
T ss_pred EEEEEEcCCC-CEEEEEeCCCEEEEEcCC--------------------CCEEEEEeCCCCCEEEEEEcCCCC-EEEEEE
Confidence 9999999999 999999999999999964 678889999999999999999999 899999
Q ss_pred eCCeEEEeecCc
Q 018697 335 YDGRVVVESVKP 346 (351)
Q Consensus 335 ~dg~v~vw~~~~ 346 (351)
.|+.|++||...
T Consensus 528 ~dg~v~lwd~~~ 539 (577)
T 2ymu_A 528 DDKTVKLWNRNG 539 (577)
T ss_dssp TTSEEEEECTTS
T ss_pred CcCEEEEEeCCC
Confidence 999999999753
No 43
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.4e-38 Score=265.17 Aligned_cols=249 Identities=18% Similarity=0.275 Sum_probs=209.4
Q ss_pred EEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcE
Q 018697 57 ICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDK 136 (351)
Q Consensus 57 ~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 136 (351)
....+.+|.+.|.+++|+|+++.|+++ +.|+.|++|++. ..+....+.+|...|.+++|+|+++. +
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~----~~dg~i~iw~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~-l 80 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASS----SADKLIKIWGAY---------DGKFEKTISGHKLGISDVAWSSDSNL-L 80 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE----ETTSCEEEEETT---------TCCEEEEECCCSSCEEEEEECTTSSE-E
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEe----eCCCeEEEEeCC---------CcccchhhccCCCceEEEEEcCCCCE-E
Confidence 346678999999999999999988885 699999999987 56777888999999999999999984 6
Q ss_pred EEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce--eEEE
Q 018697 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--VRNV 214 (351)
Q Consensus 137 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--v~~~ 214 (351)
++++.|+.|++||+.++..... ..+|...|.+++|+|+++++++++.|+.|++||+++++....+.... +.++
T Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 155 (312)
T 4ery_A 81 VSASDDKTLKIWDVSSGKCLKT-----LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 155 (312)
T ss_dssp EEEETTSEEEEEETTTCCEEEE-----EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEE-----EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEE
Confidence 7778999999999987543322 23567789999999999999999999999999999988777776322 9999
Q ss_pred EcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCc
Q 018697 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE 293 (351)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 293 (351)
+|+|++. ++++++.|+.|++||+++ .+.+..+ ..+..++..++|+|++ .+|++++.|+.|++||++.
T Consensus 156 ~~~~~~~-~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~--------- 223 (312)
T 4ery_A 156 HFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSK--------- 223 (312)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTT-CCEEEEECCSSCCCEEEEEECTTS-SEEEEEETTTEEEEEETTT---------
T ss_pred EEcCCCC-EEEEEeCCCcEEEEECCC-CceeeEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCC---------
Confidence 9999998 899999999999999997 5555555 3566789999999999 9999999999999999998
Q ss_pred ccccCCcccccccceeeccccceEEE--EEeC-CCCCceEEEeeeCCeEEEeecCcc
Q 018697 294 SLVESPNQRANSLLNSYSDYEDSVYG--LAWS-SREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~-~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++++..+.+|...+.. ..++ +++. +|++++.||.|++||+.+.
T Consensus 224 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 224 ----------GKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp ----------TEEEEEECSSCCSSSCCCEEEECSSSC-EEEECCTTSCEEEEETTTC
T ss_pred ----------CcEEEEEEecCCceEEEEEEEEeCCCc-EEEEECCCCEEEEEECCCc
Confidence 7888888877654332 3344 5566 8999999999999998753
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.3e-38 Score=270.38 Aligned_cols=307 Identities=17% Similarity=0.172 Sum_probs=231.4
Q ss_pred eeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEE
Q 018697 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAI 95 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~v 95 (351)
...+..+.++++...+++|. .++.+++|++.... ......+.+|...|.+++|+|+++.|+++ +.|+.|++
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~----~d~~v~i~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~----~~dg~i~v 78 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICP----NNHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAPDSNRIVTC----GTDRNAYV 78 (372)
T ss_dssp SSCCCEEEECTTSSEEEEEC----SSSEEEEEEEETTE-EEEEEEEECCSSCEEEEEEETTTTEEEEE----ETTSCEEE
T ss_pred CCCeEEEEECCCCCEEEEEe----CCCEEEEEeCCCCc-EEeeeeecCCCCcccEEEEeCCCCEEEEE----cCCCeEEE
Confidence 45577778888988888874 47999999987642 12345667899999999999999888875 68999999
Q ss_pred EEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeE
Q 018697 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGA 175 (351)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 175 (351)
|++.. ........+..|...|.+++|+|+++. +++++.|+.|++||+....... .......+|...+.+++
T Consensus 79 wd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i~d~~~~~~~~-~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 79 WTLKG-------RTWKPTLVILRINRAARCVRWAPNEKK-FAVGSGSRVISICYFEQENDWW-VCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp EEEET-------TEEEEEEECCCCSSCEEEEEECTTSSE-EEEEETTSSEEEEEEETTTTEE-EEEEECTTCCSCEEEEE
T ss_pred EECCC-------CeeeeeEEeecCCCceeEEEECCCCCE-EEEEeCCCEEEEEEecCCCcce-eeeeeecccCCCeeEEE
Confidence 99972 122334445679999999999999984 6677889999999998654211 11122235667999999
Q ss_pred ECCCCCcEEEeecCCeEEEEEcc------------------cCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEE
Q 018697 176 WDPHDVNAVAATCESSVQFWDLR------------------SMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIH 234 (351)
Q Consensus 176 ~~~~~~~l~~~~~d~~i~iwd~~------------------~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~ 234 (351)
|+|+++++++++.|+.|++||++ .++.+..+. .| +.+++|+|++. ++++++.|+.|+
T Consensus 150 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~ 227 (372)
T 1k8k_C 150 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGS-RVAWVSHDSTVC 227 (372)
T ss_dssp ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSS-EEEEEETTTEEE
T ss_pred EcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCC-EEEEEeCCCEEE
Confidence 99999999999999999999964 344444444 33 99999999998 899999999999
Q ss_pred EEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC--CCCC---CCCC--cccc------cCC--
Q 018697 235 LWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST--SNHD---ELPS--ESLV------ESP-- 299 (351)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~---~~~~--~~~~------~~~-- 299 (351)
+||+++ .+++..+..|..+|.+++|+|++ .+++++ .|+.|++|+++. +.-. .... .... ..+
T Consensus 228 i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (372)
T 1k8k_C 228 LADADK-KMAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 304 (372)
T ss_dssp EEEGGG-TTEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHH
T ss_pred EEECCC-CceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhh
Confidence 999998 66889999999999999999999 888877 899999999986 2100 0000 0000 000
Q ss_pred cccccccc------eee-ccccceEEEEEeC-CCC---CceEEEeeeCCeEEEeecCc
Q 018697 300 NQRANSLL------NSY-SDYEDSVYGLAWS-SRE---PWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 300 ~~~~~~~~------~~~-~~~~~~v~~~~~~-~~~---~~~l~s~~~dg~v~vw~~~~ 346 (351)
....+... ..+ .+|...|++++|+ +++ . +|++++.||.|++|++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~-~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 305 LDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS-QFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp CCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS-EEEEEETTSEEEEEEHHH
T ss_pred cccccccccCccccccccccccCCcceeEEecCCCccee-eEEEecCCCceEEEEecC
Confidence 00001111 233 4899999999977 555 6 899999999999999865
No 45
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=274.43 Aligned_cols=305 Identities=15% Similarity=0.149 Sum_probs=233.2
Q ss_pred eEeeeecCCCCcc-eEEEeeeeeCCCCEEEEEEe----CCCCCe--E-EEEeeec----------CCcceeeeeeCCCCC
Q 018697 17 RCISDVKADTDHT-SFLTGTLSLKEENEVHLLRL----SSGGTE--L-ICEGLFS----------HPNEIWDLSSCPFDQ 78 (351)
Q Consensus 17 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~i~~~~~----~~~~~~--~-~~~~~~~----------h~~~v~~i~~~~~~~ 78 (351)
..+..+.++|+.. .++.|. .++.+.+|++ ...... + ....+.. |.+.|.+++|+|+++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGE----KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEE----TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred CceEEEEECCCCCcEEEEec----CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 4566788889888 787764 5799999999 544310 0 1111222 678999999999999
Q ss_pred ceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcc
Q 018697 79 RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQ 158 (351)
Q Consensus 79 ~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~ 158 (351)
.|+++ +.|+.|++|+. ..+.+..+..|...|.+++|+|+++. +++++.|+.|++||+.++.....
T Consensus 122 ~l~~~----~~dg~i~i~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 122 SIVTG----VENGELRLWNK----------TGALLNVLNFHRAPIVSVKWNKDGTH-IISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp EEEEE----ETTSCEEEEET----------TSCEEEEECCCCSCEEEEEECTTSSE-EEEEETTCCEEEEETTTTEEEEE
T ss_pred EEEEE----eCCCeEEEEeC----------CCCeeeeccCCCccEEEEEECCCCCE-EEEEecCCeEEEEECCCCcEEEE
Confidence 88885 68999999993 45777888899999999999999984 66778899999999976432211
Q ss_pred ccc---------------------------------------------------ccccCcccceeeeEECCCCCcEEEee
Q 018697 159 VQS---------------------------------------------------KQSSGMLHYLSGGAWDPHDVNAVAAT 187 (351)
Q Consensus 159 ~~~---------------------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (351)
+.. .....|...+.+++|+|++++|++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS 266 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc
Confidence 100 01225667899999999999999999
Q ss_pred cCCeEEEEEcccCCcCceeecce--eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCC
Q 018697 188 CESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYD 265 (351)
Q Consensus 188 ~d~~i~iwd~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 265 (351)
.|+.|++||+++++....+.... +.+++|+|++ ++++++.|+.|++||+++ .+.+..+..|...|.+++|+|++
T Consensus 267 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~- 342 (425)
T 1r5m_A 267 DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDG- 342 (425)
T ss_dssp TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTS-
T ss_pred CCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCC-
Confidence 99999999999988887776222 9999999998 688999999999999987 67888889999999999999999
Q ss_pred CeEEEeeCCCeEEEEEcCCCCCCCCC-CcccccCCcccccccceeeccccc--eEEEEEeCCCCCceEEEeeeCCeEEEe
Q 018697 266 GFILSAGTDSTVNLWLVSTSNHDELP-SESLVESPNQRANSLLNSYSDYED--SVYGLAWSSREPWIFASLSYDGRVVVE 342 (351)
Q Consensus 266 ~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~v~vw 342 (351)
.+|++++.||.|++||++........ .............+++..+..|.. .|++++|+|+++ +|++++.||.|++|
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVV 421 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEE
T ss_pred CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc-eEEEEecCceEEEE
Confidence 99999999999999999872100000 000000000001227788888866 899999999999 89999999999999
Q ss_pred ecC
Q 018697 343 SVK 345 (351)
Q Consensus 343 ~~~ 345 (351)
+++
T Consensus 422 ~~~ 424 (425)
T 1r5m_A 422 AIP 424 (425)
T ss_dssp ECC
T ss_pred eec
Confidence 986
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.1e-37 Score=260.90 Aligned_cols=296 Identities=17% Similarity=0.240 Sum_probs=229.7
Q ss_pred cccceeEeeeecCCCCcc-eEEEeeeeeCCCCEEEEEEeCCCCC--eEEEEeeecCCcceeeeeeCCCCCceEEEEeecC
Q 018697 12 LKYQARCISDVKADTDHT-SFLTGTLSLKEENEVHLLRLSSGGT--ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG 88 (351)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~ 88 (351)
++.....|..+.++|+.. .|+.| ..|+.|++|++..... ......+.+|...|.+++|+|+++.|+++ +
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~----s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~----~ 105 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSA----SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG----S 105 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEE----ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE----E
T ss_pred ECCccCCEEEEEEeCCCCCEEEEE----cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE----c
Confidence 444556788888998754 44444 3689999999986543 33446678999999999999999998885 6
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 168 (351)
.|+.|++|+.. ..........+...+..+.+++++.. +++++.|+.+++||+...... .....+|.
T Consensus 106 ~d~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~s~d~~~~~~d~~~~~~~----~~~~~~~~ 171 (340)
T 4aow_A 106 WDGTLRLWDLT---------TGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKLWNTLGVCKY----TVQDESHS 171 (340)
T ss_dssp TTSEEEEEETT---------TTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEE----EECSSSCS
T ss_pred ccccceEEeec---------ccceeeeecCCCCceeEEEEeecCcc-ceeecCCCeEEEEEeCCCceE----EEEecccc
Confidence 99999999988 55666777788889999999999984 777789999999998743221 22233567
Q ss_pred cceeeeEECCCCC--cEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCc
Q 018697 169 HYLSGGAWDPHDV--NAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243 (351)
Q Consensus 169 ~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 243 (351)
..+..++|++++. .+++++.|+.|++||+++++....+. +| |.+++|+|+++ +|++|+.|+.|++||++. .+
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~-~~ 248 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNE-GK 248 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTT-TE
T ss_pred CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEecc-Cc
Confidence 7899999988754 46788899999999999988777766 44 99999999998 899999999999999997 66
Q ss_pred ceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeC
Q 018697 244 PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS 323 (351)
Q Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 323 (351)
++..+.. ...|.++.|+|++ .+++++.|+.|++||++........ ...........|...|++++|+
T Consensus 249 ~~~~~~~-~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~~----------~~~~~~~~~~~h~~~v~~l~~s 315 (340)
T 4aow_A 249 HLYTLDG-GDIINALCFSPNR--YWLCAATGPSIKIWDLEGKIIVDEL----------KQEVISTSSKAEPPQCTSLAWS 315 (340)
T ss_dssp EEEEEEC-SSCEEEEEECSSS--SEEEEEETTEEEEEETTTTEEEEEE----------CCC-------CCCCCEEEEEEC
T ss_pred eeeeecC-CceEEeeecCCCC--ceeeccCCCEEEEEECCCCeEEEec----------cccceeeeccCCCCCEEEEEEC
Confidence 7777764 5689999999986 4556777999999999871100000 0011122334688899999999
Q ss_pred CCCCceEEEeeeCCeEEEeecCc
Q 018697 324 SREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 324 ~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
|+++ +|++|+.||.|+|||+++
T Consensus 316 ~dg~-~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 316 ADGQ-TLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp TTSS-EEEEEETTSCEEEEEEEC
T ss_pred CCCC-EEEEEeCCCEEEEEeCCC
Confidence 9999 899999999999999875
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-38 Score=280.21 Aligned_cols=317 Identities=15% Similarity=0.240 Sum_probs=231.9
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCe-EEEEeeecCCcceeeeeeCCC-CCceEEEEeecCCcceEEE
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTE-LICEGLFSHPNEIWDLSSCPF-DQRIFSTVFSTGESYGAAI 95 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~h~~~v~~i~~~~~-~~~l~~~~~~~~~d~~i~v 95 (351)
.+..+.++++...++.|. .++.+++|++...... .....+.+|...|.+++|+|+ +..|+++ +.|+.|++
T Consensus 69 ~v~~~~~s~~~~~l~~~~----~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~dg~v~i 140 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGAL----DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASG----GNNGEIFI 140 (416)
T ss_dssp CEEEEEECSSSSCEEEEE----SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEE----CSSSCEEB
T ss_pred ceEEEEECCCCCeEEEEc----cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEE----cCCCeEEE
Confidence 456677788888888775 4789999998873221 245667889999999999998 5666663 79999999
Q ss_pred EEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccc-cccCcccceeee
Q 018697 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGG 174 (351)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~v~~~ 174 (351)
||+.................+..|...|.+++|+|++..++++++.|+.|++||+.++.....+... ...+|...+.++
T Consensus 141 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp CBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEE
T ss_pred EECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEE
Confidence 9998321000000011223346799999999999996555777788999999999875433322221 112235689999
Q ss_pred EECCCC-CcEEEeecCC---eEEEEEcccC-CcCceeecce---eEEEEcCC-CCCcEEEEecCCCeEEEEecccCCcce
Q 018697 175 AWDPHD-VNAVAATCES---SVQFWDLRSM-GKTNSIEHAH---VRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAPI 245 (351)
Q Consensus 175 ~~~~~~-~~l~~~~~d~---~i~iwd~~~~-~~~~~~~~~~---v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~ 245 (351)
+|+|++ ..+++++.|+ .|++||++++ .....+...| +.+++|+| ++. +|++++.|+.|++||+++ .+++
T Consensus 221 ~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~-~~~~ 298 (416)
T 2pm9_A 221 EWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPES-AEQL 298 (416)
T ss_dssp EECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSS-CCEE
T ss_pred EECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCC-Cccc
Confidence 999997 4678888888 9999999986 4444444134 99999999 776 899999999999999998 6788
Q ss_pred eEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCc---ccccCC--------------cccccccce
Q 018697 246 QELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE---SLVESP--------------NQRANSLLN 308 (351)
Q Consensus 246 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~--------------~~~~~~~~~ 308 (351)
..+..|...|.+++|+|+++.+|++++.|+.|++||+........... .....+ ....... .
T Consensus 299 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 377 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL-Q 377 (416)
T ss_dssp EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCC-C
T ss_pred eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc-c
Confidence 999999999999999999878999999999999999987543322111 000000 0000011 2
Q ss_pred eeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 309 SYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 309 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
....|..++.+++|+|+|+ +|++++.|+.|+||++.+
T Consensus 378 ~~~~~~~~~~~~~~s~dg~-~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 378 APTWYGEPSPAAHWAFGGK-LVQITPDGKGVSITNPKI 414 (416)
T ss_dssp CCSTTCCCSCCCEEETTTE-EECBCTTSSCBCCBCCCC
T ss_pred CCccccCCccceEEeeCCe-EEEEeCCCCeEEEEEecc
Confidence 2233677888999999998 899999999999999875
No 48
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.4e-37 Score=264.14 Aligned_cols=252 Identities=15% Similarity=0.191 Sum_probs=199.0
Q ss_pred EEeeecCCcceeeeee-----CC-CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC
Q 018697 58 CEGLFSHPNEIWDLSS-----CP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS 131 (351)
Q Consensus 58 ~~~~~~h~~~v~~i~~-----~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 131 (351)
...+.+|.+.|++++| ++ +++.|+++ +.|++|++|++..... ......+...+.+|...|.+++|+|+
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sg----s~D~~v~iWd~~~~~~--~~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISG----SRDKTVMIWKLYEEEQ--NGYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEE----ETTSCEEEEEECSSCC--SSBSEEEEEEECCCSSCEEEEEECSS
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEE----cCCCEEEEEECCcCCc--ccccccccchhccCCCceEEEEECCC
Confidence 3567899999999999 76 77777774 7999999999873110 00123566788999999999999999
Q ss_pred CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee--cc
Q 018697 132 GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE--HA 209 (351)
Q Consensus 132 ~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~ 209 (351)
+.. +++++.|++|++||+.++..... ..+|...|.+++|+|++++|++++.|+.|++||+.... ..... ..
T Consensus 88 ~~~-l~s~s~D~~v~lwd~~~~~~~~~-----~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~ 160 (343)
T 2xzm_R 88 NCF-AISSSWDKTLRLWDLRTGTTYKR-----FVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKEN 160 (343)
T ss_dssp TTE-EEEEETTSEEEEEETTSSCEEEE-----EECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTS
T ss_pred CCE-EEEEcCCCcEEEEECCCCcEEEE-----EcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccC
Confidence 983 66778999999999987543322 23677799999999999999999999999999997432 22221 12
Q ss_pred e---eEEEEcCCCCC---------cEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeE
Q 018697 210 H---VRNVDYDTKKK---------HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV 277 (351)
Q Consensus 210 ~---v~~~~~~~~~~---------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 277 (351)
| +.+++|+|++. .++++++.|+.|++||.+ .+....+.+|...|.+++|+|++ .+|++++.|+.|
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v 237 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNG-KYIATGGKDKKL 237 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTS-SEEEEEETTCEE
T ss_pred CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCC-CEEEEEcCCCeE
Confidence 3 99999999872 279999999999999954 55677888999999999999999 999999999999
Q ss_pred EEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 278 NLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++||+... ..+...+ .+...|.+++|+|++. +++ ++.|+.|++|++.+
T Consensus 238 ~iwd~~~~------------------~~~~~~~-~~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 238 LIWDILNL------------------TYPQREF-DAGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMT 285 (343)
T ss_dssp EEEESSCC------------------SSCSEEE-ECSSCEEEEEECSSSC-EEE-EEESSCEEEEESSS
T ss_pred EEEECCCC------------------cccceee-cCCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCC
Confidence 99999541 3333333 3445699999999987 554 55688999999864
No 49
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1e-36 Score=268.35 Aligned_cols=264 Identities=16% Similarity=0.214 Sum_probs=217.2
Q ss_pred CCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecc
Q 018697 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (351)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h 119 (351)
.++.|++|+..... ......+.+|...|++++|+|++++|+++ +.|+.|+|||+. +.+.+..+.+|
T Consensus 123 ld~tV~lWd~~tg~-~~~~~~~~~~~~~V~sv~fspdg~~lasg----s~Dg~v~iWd~~---------~~~~~~~~~~h 188 (420)
T 4gga_A 123 LDNSVYLWSASSGD-ILQLLQMEQPGEYISSVAWIKEGNYLAVG----TSSAEVQLWDVQ---------QQKRLRNMTSH 188 (420)
T ss_dssp ETTEEEEEETTTCC-EEEEEECCSTTCCEEEEEECTTSSEEEEE----ETTSCEEEEETT---------TTEEEEEECCC
T ss_pred eCCEEEEEECCCCC-EEEEEEecCCCCcEEEEEECCCCCEEEEE----ECCCeEEEEEcC---------CCcEEEEEeCC
Confidence 47899999987642 23334456788999999999999998885 799999999998 67888999999
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEccc
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS 199 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 199 (351)
...+.++.+++ . ++++++.|+.+++||......... ...+|...+..+.|+|+++.+++++.|+.+++||..+
T Consensus 189 ~~~v~~~s~~~--~-~l~sgs~d~~i~~~d~~~~~~~~~----~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 189 SARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAEHHVA----TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp SSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEE----EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred CCceEEEeeCC--C-EEEEEeCCCceeEeeecccceeeE----EecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 99999998864 3 466678999999999885433322 2336777999999999999999999999999999987
Q ss_pred CCcCce---eecce---eEEEEcCCCCCcEEEE--ecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEe
Q 018697 200 MGKTNS---IEHAH---VRNVDYDTKKKHLLVT--AADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 200 ~~~~~~---~~~~~---v~~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 271 (351)
++.... ....+ |.+++|+|.+..++++ |+.|+.|++||+++ ++++..+.. ...+.++.|+|++ ..++++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~~-~~~v~~~~~~~~~-~~lv~~ 338 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDA-HSQVCSILWSPHY-KELISG 338 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEEEEEC-SSCEEEEEEETTT-TEEEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccceeecc-ccceeeeeecCCC-CeEEEE
Confidence 754321 12233 9999999998877765 45899999999997 667777764 4678899999999 666654
Q ss_pred e--CCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 272 G--TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 272 ~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
+ .|+.|+|||+.+ ++++.++.+|...|++++|+|+|+ +|++|+.|++|++||+.+.
T Consensus 339 sg~~d~~I~iwd~~~-------------------~~~v~~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 339 HGFAQNQLVIWKYPT-------------------MAKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFEL 396 (420)
T ss_dssp ECTTTCCEEEEETTT-------------------CCEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSCS
T ss_pred EecCCCEEEEEECCC-------------------CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCCC
Confidence 4 799999999998 899999999999999999999999 8999999999999998654
No 50
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3e-38 Score=279.32 Aligned_cols=275 Identities=13% Similarity=0.136 Sum_probs=199.1
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 138 (351)
....+|...|++|+|+|.+..++++ |+.||.|+|||+.. ........+.+|.+.|++|+|+|.+..++++
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~las---Gs~dg~i~lWd~~~-------~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAV---GSKGGDIMLWNFGI-------KDKPTFIKGIGAGGSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEE---EETTSCEEEECSSC-------CSCCEEECCCSSSCCCCEEEECSSCTTEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEE---EeCCCEEEEEECCC-------CCceeEEEccCCCCCEEEEEEeCCCCCEEEE
Confidence 3456789999999999976665555 58999999999872 2334455667899999999999854445777
Q ss_pred EecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEE
Q 018697 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVD 215 (351)
Q Consensus 139 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~ 215 (351)
++.|++|++||+++.. . .... ....+...+.+++|+|++.+|++++.||.|++||++. +.+..+. .| |.+++
T Consensus 183 ~s~D~~v~iwd~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~-~h~~~v~~v~ 257 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNI-L-RVFA-SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLR-MHKKKVTHVA 257 (435)
T ss_dssp ECSSSCEEEEETTSCE-E-EEEE-CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSB-CCSSCEEEEE
T ss_pred EeCCCEEEEeeccCCc-e-eEEe-ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEe-cccceEEeee
Confidence 7999999999997532 1 1111 1123344688999999999999999999999999975 4455554 44 99999
Q ss_pred cCCCCCcEEEEecCCCeEEEEecccCCc--ceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCC---
Q 018697 216 YDTKKKHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDEL--- 290 (351)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--- 290 (351)
|+|+++.++++|+.|+.|++||++.... .+....+|..+|++++|+|++ .+|++++.|+.|++||++.......
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG-ARLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTS-SEEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCC-CeeEEEcCCCEEEEEECCCCccceEEec
Confidence 9999987899999999999999987432 223345799999999999999 9999999999999999986432100
Q ss_pred ----------CCcc----------ccc------------------CCcccccccceee-ccccceEEEE-EeCCCCCceE
Q 018697 291 ----------PSES----------LVE------------------SPNQRANSLLNSY-SDYEDSVYGL-AWSSREPWIF 330 (351)
Q Consensus 291 ----------~~~~----------~~~------------------~~~~~~~~~~~~~-~~~~~~v~~~-~~~~~~~~~l 330 (351)
.... ... .++...++.+..+ .+|...|.++ +|+|+|. +|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~-~l 415 (435)
T 4e54_B 337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD-TL 415 (435)
T ss_dssp CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS-CE
T ss_pred ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC-EE
Confidence 0000 000 0111223334343 3577778887 6999998 78
Q ss_pred EEeeeCCeEEEeecCcccccC
Q 018697 331 ASLSYDGRVVVESVKPFLSRK 351 (351)
Q Consensus 331 ~s~~~dg~v~vw~~~~~~~~~ 351 (351)
++|+ |+.|+||++++..++|
T Consensus 416 asg~-d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 416 ASAM-GYHILIWSQQEARTRK 435 (435)
T ss_dssp EEEC-SSEEEECCCC------
T ss_pred EEEc-CCcEEEEECCcCeeeC
Confidence 8776 8899999999887776
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4e-37 Score=263.55 Aligned_cols=275 Identities=15% Similarity=0.182 Sum_probs=212.2
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDK 136 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~ 136 (351)
..+.+|.+.|.+++|+|+++.|+++ +.|+.|++|++... ....+....+.+|...|.+++|+|. +. ++
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~----~~dg~i~iw~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l 74 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATC----SSDQHIKVFKLDKD-----TSNWELSDSWRAHDSSIVAIDWASPEYGR-II 74 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEE----ETTSEEEEEEECSS-----SCCEEEEEEEECCSSCEEEEEECCGGGCS-EE
T ss_pred ccCcccccceeEEEEcCCCCEEEEe----eCCCeEEEEECCCC-----CCcceecceeccCCCcEEEEEEcCCCCCC-EE
Confidence 3456899999999999999988885 68999999999731 1123567778899999999999994 66 47
Q ss_pred EEEecCCcEEEEEcCCCCCCcc----cccccccCcccceeeeEECCC--CCcEEEeecCCeEEEEEcccCCcCceeec--
Q 018697 137 LVSIDEENIFLWSLDCSNKNAQ----VQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKTNSIEH-- 208 (351)
Q Consensus 137 ~~~~~d~~v~iwd~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-- 208 (351)
++++.|+.|++||+.++..... .......+|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+..
T Consensus 75 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 154 (351)
T 3f3f_A 75 ASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS 154 (351)
T ss_dssp EEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE
T ss_pred EEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc
Confidence 7778999999999987542210 112223467779999999999 99999999999999999998876655431
Q ss_pred ----------ce---eEEEEcCCC---CCcEEEEecCCCeEEEEecccCCcc--eeEeeCCCCceeEEEecCCCC---Ce
Q 018697 209 ----------AH---VRNVDYDTK---KKHLLVTAADESGIHLWDLRMLKAP--IQELPGHTHWTWAVCCNPEYD---GF 267 (351)
Q Consensus 209 ----------~~---v~~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~---~~ 267 (351)
.+ +.+++|+|+ +. ++++++.++.+.+|+... ... +..+.+|...|++++|+|++. .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 155 EMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKD-GKLHVAAKLPGHKSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp EEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTT-SCEEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred cccccccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCC-CceeeeeecCCCCcceeEEEECCCCCCcceE
Confidence 22 899999997 66 899999999998777765 433 667778999999999999973 58
Q ss_pred EEEeeCCCeEEEEEcCCCCCCCCCCcc---------------------------cccCCcccccccceeeccccceEEEE
Q 018697 268 ILSAGTDSTVNLWLVSTSNHDELPSES---------------------------LVESPNQRANSLLNSYSDYEDSVYGL 320 (351)
Q Consensus 268 l~s~~~dg~i~iwd~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (351)
|++++.||.|++||++........... ....+.....+++..+.+|...|+++
T Consensus 233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 312 (351)
T 3f3f_A 233 IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSV 312 (351)
T ss_dssp EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEE
T ss_pred EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEE
Confidence 999999999999999864221110000 00001112246677788899999999
Q ss_pred EeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 321 AWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 321 ~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+|+|+++ +|++++.||.|++|++..
T Consensus 313 ~~s~~~~-~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 313 SWNLTGT-ILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp EECSSSC-CEEEEETTSCEEEEEECT
T ss_pred EEcCCCC-EEEEecCCCcEEEEecCc
Confidence 9999998 899999999999999975
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9e-37 Score=267.14 Aligned_cols=263 Identities=16% Similarity=0.196 Sum_probs=217.6
Q ss_pred CCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecc
Q 018697 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (351)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h 119 (351)
.++.|++|++.... ........|...|.+++|+|++..|+++ +.|+.|++|++. ..+.+..+..|
T Consensus 111 ~d~~v~lw~~~~~~--~~~~~~~~~~~~v~~v~~s~~~~~l~~~----~~dg~i~iwd~~---------~~~~~~~~~~~ 175 (401)
T 4aez_A 111 LERNVYVWNADSGS--VSALAETDESTYVASVKWSHDGSFLSVG----LGNGLVDIYDVE---------SQTKLRTMAGH 175 (401)
T ss_dssp ETTEEEEEETTTCC--EEEEEECCTTCCEEEEEECTTSSEEEEE----ETTSCEEEEETT---------TCCEEEEECCC
T ss_pred CCCeEEEeeCCCCc--EeEeeecCCCCCEEEEEECCCCCEEEEE----CCCCeEEEEECc---------CCeEEEEecCC
Confidence 57899999987643 2223333489999999999999888885 689999999998 56788889999
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEccc
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS 199 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 199 (351)
...|.+++|++ . .+++++.|+.|++||+......... ..+|...|.+++|+|+++.|++++.|+.|++||+++
T Consensus 176 ~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 176 QARVGCLSWNR--H-VLSSGSRSGAIHHHDVRIANHQIGT----LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp SSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEE----EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred CCceEEEEECC--C-EEEEEcCCCCEEEEecccCcceeeE----EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 99999999954 3 4777799999999999854332222 235677999999999999999999999999999999
Q ss_pred CCcCceeecce--eEEEEcCCCCCcEEEEec--CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEE--eeC
Q 018697 200 MGKTNSIEHAH--VRNVDYDTKKKHLLVTAA--DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILS--AGT 273 (351)
Q Consensus 200 ~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s--~~~ 273 (351)
++....+.... +.+++|+|++..++++++ .|+.|++||+++ .+++..+. +...|.+++|+|++ .++++ |+.
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~-~~~~v~~~~~s~~~-~~l~~~~g~~ 325 (401)
T 4aez_A 249 SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVD-AGSQVTSLIWSPHS-KEIMSTHGFP 325 (401)
T ss_dssp SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSS-SEEEEEECTT
T ss_pred CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEe-CCCcEEEEEECCCC-CeEEEEeecC
Confidence 88777665222 999999999887888866 799999999997 66777776 67889999999999 88888 458
Q ss_pred CCeEEEEEcCCCCCCCCCCcccccCCccccccc--ceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 274 DSTVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 274 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
|+.|++||+.. +.. ...+.+|...|.+++|+|+++ +|++++.||.|++|++.+.
T Consensus 326 dg~i~v~~~~~-------------------~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 326 DNNLSIWSYSS-------------------SGLTKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp TCEEEEEEEET-------------------TEEEEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECCC-
T ss_pred CCcEEEEecCC-------------------ccceeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC
Confidence 99999999987 433 334678999999999999999 8999999999999999753
No 53
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.5e-37 Score=266.03 Aligned_cols=280 Identities=12% Similarity=0.140 Sum_probs=215.7
Q ss_pred ceeEeeeecCCCCc-ceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCC-CCCceEEEEeecCCcce
Q 018697 15 QARCISDVKADTDH-TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCP-FDQRIFSTVFSTGESYG 92 (351)
Q Consensus 15 ~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~-~~~~l~~~~~~~~~d~~ 92 (351)
....+..+.++++. ..++.|. .++.|++|++...... ......+|...|.+++|+| ++..|+++ +.|+.
T Consensus 72 h~~~v~~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~d~~ 142 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHPTTVAVGS----KGGDIILWDYDVQNKT-SFIQGMGPGDAITGMKFNQFNTNQLFVS----SIRGA 142 (383)
T ss_dssp CSSCEEEEEECSSCTTEEEEEE----BTSCEEEEETTSTTCE-EEECCCSTTCBEEEEEEETTEEEEEEEE----ETTTE
T ss_pred CCCCEEEEEECCCCCCEEEEEc----CCCeEEEEeCCCcccc-eeeecCCcCCceeEEEeCCCCCCEEEEE----eCCCE
Confidence 34567778888887 6777764 4789999999865432 2233457999999999999 55666664 78999
Q ss_pred EEEEEcccccCCCCCCcceeeeee---eccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccc
Q 018697 93 AAIWQIPELYGQLNSPQLERIAAL---DAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
|++||+. . ..+..+ ..|...|.+++|+|++.. +++++.|+.|++||+. +.... ...+|..
T Consensus 143 i~iwd~~---------~-~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~-~~~~~-----~~~~h~~ 205 (383)
T 3ei3_B 143 TTLRDFS---------G-SVIQVFAKTDSWDYWYCCVDVSVSRQM-LATGDSTGRLLLLGLD-GHEIF-----KEKLHKA 205 (383)
T ss_dssp EEEEETT---------S-CEEEEEECCCCSSCCEEEEEEETTTTE-EEEEETTSEEEEEETT-SCEEE-----EEECSSS
T ss_pred EEEEECC---------C-CceEEEeccCCCCCCeEEEEECCCCCE-EEEECCCCCEEEEECC-CCEEE-----EeccCCC
Confidence 9999997 2 333344 345588999999999984 6777899999999995 22211 2235677
Q ss_pred ceeeeEECCCCC-cEEEeecCCeEEEEEcccC----CcCceeecce-eEEEEcCC-CCCcEEEEecCCCeEEEEecccCC
Q 018697 170 YLSGGAWDPHDV-NAVAATCESSVQFWDLRSM----GKTNSIEHAH-VRNVDYDT-KKKHLLVTAADESGIHLWDLRMLK 242 (351)
Q Consensus 170 ~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~-v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~ 242 (351)
.|.+++|+|+++ .+++++.|+.|++||+++. ..+..+.... +.+++|+| ++. +|++++.|+.|++||+++ .
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~-~ 283 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYD-W 283 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTB-T
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCC-C
Confidence 999999999999 7889999999999999983 3444443223 99999999 888 899999999999999997 4
Q ss_pred cceeEeeCCC-----------------CceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccc
Q 018697 243 APIQELPGHT-----------------HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANS 305 (351)
Q Consensus 243 ~~~~~~~~~~-----------------~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (351)
.....+..|. ..+..++|+|++ .+ +++.|+.|++||+.+ ++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd~~~-------------------~~ 341 (383)
T 3ei3_B 284 SKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYDANS-------------------GG 341 (383)
T ss_dssp TSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEETTT-------------------CC
T ss_pred ccccccccccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEecCC-------------------Cc
Confidence 4555555443 234446777777 55 788999999999998 78
Q ss_pred cceeecc--ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 306 LLNSYSD--YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 306 ~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++..+.+ |...+..++|+|+++ +|++++ |+.|++|++++
T Consensus 342 ~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 342 LVHQLRDPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred eeeeecCCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 8888876 456777789999999 888887 99999999875
No 54
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-37 Score=265.15 Aligned_cols=255 Identities=18% Similarity=0.293 Sum_probs=206.4
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDK 136 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~ 136 (351)
..+.+|.+.|.+++|+|+++.|+++ +.|+.|+||++. ....+.+..+.+|...|.+++|+++ +. ++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~----~~dg~i~iw~~~-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l 72 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATC----SSDKTIKIFEVE-------GETHKLIDTLTGHEGPVWRVDWAHPKFGT-IL 72 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEE----ETTSCEEEEEEE-------TTEEEEEEEECCCSSCEEEEEECCGGGCS-EE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEE----ECCCcEEEEecC-------CCcceeeeEecCCCCcEEEEEeCCCCCCC-EE
Confidence 4567899999999999999988875 689999999997 2355777888999999999999977 66 46
Q ss_pred EEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCC--CCcEEEeecCCeEEEEEcccCCcCceee-cce---
Q 018697 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKTNSIE-HAH--- 210 (351)
Q Consensus 137 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~--- 210 (351)
++++.|+.|++||+.++... .......|...|.+++|+|+ +..+++++.|+.|++||++++....... ..|
T Consensus 73 ~s~~~dg~v~iwd~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 73 ASCSYDGKVLIWKEENGRWS---QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp EEEETTSCEEEEEEETTEEE---EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC
T ss_pred EEeccCCEEEEEEcCCCcee---EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc
Confidence 77789999999999864311 11222346679999999999 8999999999999999999875443332 233
Q ss_pred eEEEEcCC-------------CCCcEEEEecCCCeEEEEecccCCc---ceeEeeCCCCceeEEEecCC---CCCeEEEe
Q 018697 211 VRNVDYDT-------------KKKHLLVTAADESGIHLWDLRMLKA---PIQELPGHTHWTWAVCCNPE---YDGFILSA 271 (351)
Q Consensus 211 v~~~~~~~-------------~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~---~~~~l~s~ 271 (351)
+.+++|+| ++. ++++++.|+.|++||++.... ....+.+|...|.+++|+|+ + .+|+++
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~ 227 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-SYLASV 227 (379)
T ss_dssp EEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS-EEEEEE
T ss_pred eEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCC-CeEEEE
Confidence 99999999 576 899999999999999986432 44567789999999999999 7 999999
Q ss_pred eCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 272 GTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 272 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+.||.|++||++...... ...+.....|...|++++|+|+++ +|++++.||.|++|++.
T Consensus 228 ~~dg~i~iwd~~~~~~~~--------------~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPW--------------KKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp ETTSCEEEEEESSTTSCC--------------EEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEE
T ss_pred eCCCEEEEEeCCCCCccc--------------eeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCC
Confidence 999999999998721000 112223345788999999999999 89999999999999987
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=249.85 Aligned_cols=277 Identities=15% Similarity=0.183 Sum_probs=219.6
Q ss_pred ecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccc
Q 018697 22 VKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPEL 101 (351)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~ 101 (351)
+.++++. .+++| .++.|++|++... ..+......+|...|.+++|+|+++.|+++ +.|++|++|++.
T Consensus 31 l~WS~~~-~lAvg-----~D~tV~iWd~~tg-~~~~~~~~~~~~~~V~~v~~~~~~~~l~sg----s~Dg~v~iw~~~-- 97 (318)
T 4ggc_A 31 VDWSSGN-VLAVA-----LDNSVYLWSASSG-DILQLLQMEQPGEYISSVAWIKEGNYLAVG----TSSAEVQLWDVQ-- 97 (318)
T ss_dssp EEECTTS-EEEEE-----ETTEEEEEETTTC-CEEEEEECCSTTCCEEEEEECTTSSEEEEE----ETTSEEEEEETT--
T ss_pred EEECCCC-EEEEE-----eCCEEEEEECCCC-CEEEEEEecCCCCeEEEEEECCCCCEEEEE----ECCCcEEEeecC--
Confidence 3345543 45554 3789999998764 233334456788999999999999998885 799999999998
Q ss_pred cCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCC
Q 018697 102 YGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDV 181 (351)
Q Consensus 102 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 181 (351)
+.+.+..+.+|...+.++.+.+ . ++++++.++.+++|+.......... ..+|...+..+.+.++++
T Consensus 98 -------~~~~~~~~~~h~~~~~~~~~~~--~-~l~s~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 163 (318)
T 4ggc_A 98 -------QQKRLRNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAEHHVAT----LSGHSQEVCGLRWAPDGR 163 (318)
T ss_dssp -------TTEEEEEEECCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEE----EECCSSCEEEEEECTTSS
T ss_pred -------CceeEEEecCccceEEEeecCC--C-EEEEEecCCceEeeecCCCceeEEE----EcCccCceEEEEEcCCCC
Confidence 6788899999999988776654 3 3666688999999998864433222 235677899999999999
Q ss_pred cEEEeecCCeEEEEEcccCCcCceee---cce---eEEEEcCCCCCcEE--EEecCCCeEEEEecccCCcceeEeeCCCC
Q 018697 182 NAVAATCESSVQFWDLRSMGKTNSIE---HAH---VRNVDYDTKKKHLL--VTAADESGIHLWDLRMLKAPIQELPGHTH 253 (351)
Q Consensus 182 ~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~---v~~~~~~~~~~~~l--~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 253 (351)
++++++.|+.|++||+++++...... ..+ +.+++++|++..++ ++++.++.|++||.+. ..... ...+..
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~-~~~~~-~~~~~~ 241 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLS-AVDAHS 241 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT-CCEEE-EEECSS
T ss_pred EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc-ccccc-ccccee
Confidence 99999999999999999876433221 122 89999999887655 4567889999999986 43333 345778
Q ss_pred ceeEEEecCCCCCeEEEe--eCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEE
Q 018697 254 WTWAVCCNPEYDGFILSA--GTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFA 331 (351)
Q Consensus 254 ~v~~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 331 (351)
.+..+.|+|.+ ..++++ +.|+.|++||+++ ++++.++.+|...|++++|+|+++ +|+
T Consensus 242 ~v~~~~~~~~~-~~~~~~sg~~d~~i~iwd~~~-------------------~~~~~~l~gH~~~V~~l~~spdg~-~l~ 300 (318)
T 4ggc_A 242 QVCSILWSPHY-KELISGHGFAQNQLVIWKYPT-------------------MAKVAELKGHTSRVLSLTMSPDGA-TVA 300 (318)
T ss_dssp CEEEEEEETTT-TEEEEEECTTTCCEEEEETTT-------------------CCEEEEECCCSSCEEEEEECTTSS-CEE
T ss_pred eeeeeeecccc-cceEEEEEcCCCEEEEEECCC-------------------CcEEEEEcCCCCCEEEEEEcCCCC-EEE
Confidence 89999999999 665554 4799999999998 899999999999999999999999 899
Q ss_pred EeeeCCeEEEeecCccc
Q 018697 332 SLSYDGRVVVESVKPFL 348 (351)
Q Consensus 332 s~~~dg~v~vw~~~~~~ 348 (351)
+++.||+|+|||+.+..
T Consensus 301 S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 301 SAAADETLRLWRCFELD 317 (318)
T ss_dssp EEETTTEEEEECCSCCC
T ss_pred EEecCCeEEEEECCCCC
Confidence 99999999999997654
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.7e-38 Score=271.00 Aligned_cols=246 Identities=12% Similarity=0.165 Sum_probs=194.7
Q ss_pred ecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEec
Q 018697 62 FSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141 (351)
Q Consensus 62 ~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 141 (351)
..|.+.|.+++|+|+++.|++ ++.|+.|++|++.. ...+.+..+.+|...|.+++|+|+++. +++++.
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~----~~~d~~i~iw~~~~-------~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~ 75 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVT----TTATNQVELYEQDG-------NGWKHARTFSDHDKIVTCVDWAPKSNR-IVTCSQ 75 (377)
T ss_dssp EECSSCCSCCEECSSSSEEEC----CCSSSCBCEEEEET-------TEEEECCCBCCCSSCEEEEEECTTTCC-EEEEET
T ss_pred ecCCCcEEEEEECCCCCEEEE----ecCCCEEEEEEccC-------CceEEEEEEecCCceEEEEEEeCCCCE-EEEEeC
Confidence 346789999999999988877 47999999999982 122677888999999999999999984 777789
Q ss_pred CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCc---Cceeecce---eEEEE
Q 018697 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK---TNSIEHAH---VRNVD 215 (351)
Q Consensus 142 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~---v~~~~ 215 (351)
|+.|++||+.++...... ....+|...|.+++|+|+++.|++++.|+.|++||+++++. ...+...| |.+++
T Consensus 76 d~~v~vwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTWKQT--LVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp TSSEEEC------CCCCE--EECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred CCeEEEEEcCCCCceeee--eEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 999999999975411111 12235677999999999999999999999999999998763 55555325 99999
Q ss_pred cCCCCCcEEEEecCCCeEEEEecccC-----------------CcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEE
Q 018697 216 YDTKKKHLLVTAADESGIHLWDLRML-----------------KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278 (351)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~-----------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 278 (351)
|+|+++ +|++++.|+.|++||++.. .+++..+ .|...|.+++|+|++ .+|++++.|+.|+
T Consensus 154 ~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~-~~l~~~~~d~~i~ 230 (377)
T 3dwl_C 154 WHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG-NALAYAGHDSSVT 230 (377)
T ss_dssp ECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS-SCEEEEETTTEEC
T ss_pred EcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC-CEEEEEeCCCcEE
Confidence 999998 8999999999999998521 2345555 899999999999999 9999999999999
Q ss_pred EEEcCCCCCCCCCCcccccCCccccccc----ceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 279 LWLVSTSNHDELPSESLVESPNQRANSL----LNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 279 iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+||++. ++. +..+..|...|.+++|+|+++ +|++++.|+.+ +|+..
T Consensus 231 iwd~~~-------------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 231 IAYPSA-------------------PEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp -CEECS-------------------TTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCC
T ss_pred EEECCC-------------------CCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeC
Confidence 999998 555 788889999999999999998 78888766666 66654
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.7e-38 Score=271.60 Aligned_cols=307 Identities=14% Similarity=0.107 Sum_probs=216.6
Q ss_pred eEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEE
Q 018697 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIW 96 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw 96 (351)
..+..+.++++...++.|+ .++.|++|++.... ......+.+|...|.+++|+|+++.|+++ +.|+.|++|
T Consensus 12 ~~v~~~~~s~~g~~l~~~~----~d~~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~----s~d~~v~vw 82 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTT----ATNQVELYEQDGNG-WKHARTFSDHDKIVTCVDWAPKSNRIVTC----SQDRNAYVY 82 (377)
T ss_dssp SCCSCCEECSSSSEEECCC----SSSCBCEEEEETTE-EEECCCBCCCSSCEEEEEECTTTCCEEEE----ETTSSEEEC
T ss_pred CcEEEEEECCCCCEEEEec----CCCEEEEEEccCCc-eEEEEEEecCCceEEEEEEeCCCCEEEEE----eCCCeEEEE
Confidence 3577788888888888764 57899999998642 13345677899999999999999988885 689999999
Q ss_pred EcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEE
Q 018697 97 QIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW 176 (351)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 176 (351)
|+... ........+..|...|.+++|+|+++. +++++.|+.|++||+.++...... ......|...|.+++|
T Consensus 83 d~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 83 EKRPD------GTWKQTLVLLRLNRAATFVRWSPNEDK-FAVGSGARVISVCYFEQENDWWVS-KHLKRPLRSTILSLDW 154 (377)
T ss_dssp ------------CCCCEEECCCCSSCEEEEECCTTSSC-CEEEESSSCEEECCC-----CCCC-EEECSSCCSCEEEEEE
T ss_pred EcCCC------CceeeeeEecccCCceEEEEECCCCCE-EEEEecCCeEEEEEECCcccceee-eEeecccCCCeEEEEE
Confidence 99821 012356777889999999999999985 777788999999999875431111 1111126779999999
Q ss_pred CCCCCcEEEeecCCeEEEEEcccC------------------CcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEe
Q 018697 177 DPHDVNAVAATCESSVQFWDLRSM------------------GKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWD 237 (351)
Q Consensus 177 ~~~~~~l~~~~~d~~i~iwd~~~~------------------~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d 237 (351)
+|++++|++++.|+.|++||++.. +....+.... |.+++|+|+++ +|++++.|+.|++||
T Consensus 155 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd 233 (377)
T 3dwl_C 155 HPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAY 233 (377)
T ss_dssp CTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSS-CEEEEETTTEEC-CE
T ss_pred cCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCC-EEEEEeCCCcEEEEE
Confidence 999999999999999999999632 2233331112 99999999998 799999999999999
Q ss_pred cccCCcc----eeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCC---C--Ccccc-----------c
Q 018697 238 LRMLKAP----IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDEL---P--SESLV-----------E 297 (351)
Q Consensus 238 ~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~--~~~~~-----------~ 297 (351)
++. .+. +..+..|..+|.+++|+|++ .+|++++.++.+ +|+......... . ..... .
T Consensus 234 ~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (377)
T 3dwl_C 234 PSA-PEQPPRALITVKLSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGRE 310 (377)
T ss_dssp ECS-TTSCEEECCCEECSSSCEEEEEEEETT-EEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCC
T ss_pred CCC-CCCcceeeEeecCCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccc
Confidence 997 444 77888999999999999999 899998877665 676653221000 0 00000 0
Q ss_pred --CC-------cc-----c---ccccceeeccccceEEEEEeCCCCCc---eEEEeeeCCeEEEeec
Q 018697 298 --SP-------NQ-----R---ANSLLNSYSDYEDSVYGLAWSSREPW---IFASLSYDGRVVVESV 344 (351)
Q Consensus 298 --~~-------~~-----~---~~~~~~~~~~~~~~v~~~~~~~~~~~---~l~s~~~dg~v~vw~~ 344 (351)
.. .. . ..........|...|+++++.+.... .|+|++.||.|++||+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 311 EEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp C-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 00 00 0 00111122349999999998775543 5999999999999986
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.2e-36 Score=254.50 Aligned_cols=286 Identities=13% Similarity=0.135 Sum_probs=225.5
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~ 94 (351)
....+..+.+++++..++++.. .+.+. .+............+|...|.+++|+|+++.++++ + |+.|+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~----~-dg~i~ 75 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFP----PDALI---GPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTG----G-KGCVK 75 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCC----TTSSS---STTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEE----C-BSEEE
T ss_pred cCCceeEEEECCCCCEEEeecC----CCcEe---ccccCCccccceeccCCCceEEEEEecCCcEEEEc----C-CCeEE
Confidence 4566777888899888876641 22221 12222333344556899999999999999888874 5 99999
Q ss_pred EEEcccccCCCCCCcceeeeeee--ccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccccee
Q 018697 95 IWQIPELYGQLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172 (351)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~ 172 (351)
+|++.... ....+..+. .|...|.+++|+|+++. +++++.|+.|++||+.++..... .....|...+.
T Consensus 76 iw~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~---~~~~~~~~~i~ 145 (337)
T 1gxr_A 76 VWDISHPG------NKSPVSQLDCLNRDNYIRSCKLLPDGCT-LIVGGEASTLSIWDLAAPTPRIK---AELTSSAPACY 145 (337)
T ss_dssp EEETTSTT------CCSCSEEEECSCTTSBEEEEEECTTSSE-EEEEESSSEEEEEECCCC--EEE---EEEECSSSCEE
T ss_pred EEECCCCC------ceeeeecccccCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEEECCCCCccee---eecccCCCceE
Confidence 99997311 112233333 78999999999999984 66678899999999986542111 12234566899
Q ss_pred eeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce--eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC
Q 018697 173 GGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250 (351)
Q Consensus 173 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 250 (351)
+++|+|+++.+++++.|+.|++||+++++....+.... +.+++|+|+++ ++++++.|+.|++||++. .+.+..+.
T Consensus 146 ~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~~- 222 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLRE-GRQLQQHD- 222 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-TEEEEEEE-
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCC-EEEEEecCCcEEEEECCC-CceEeeec-
Confidence 99999999999999999999999999988777776322 99999999998 899999999999999997 55666654
Q ss_pred CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceE
Q 018697 251 HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIF 330 (351)
Q Consensus 251 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 330 (351)
+...+.+++|+|++ .+|++++.|+.|++||++. .+ ...+..|...|.+++|+|+++ +|
T Consensus 223 ~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~-------------------~~-~~~~~~~~~~v~~~~~~~~~~-~l 280 (337)
T 1gxr_A 223 FTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNK-------------------PD-KYQLHLHESCVLSLKFAYCGK-WF 280 (337)
T ss_dssp CSSCEEEEEECTTS-SEEEEEETTSCEEEEETTS-------------------SC-EEEECCCSSCEEEEEECTTSS-EE
T ss_pred CCCceEEEEECCCC-CEEEEEcCCCcEEEEECCC-------------------CC-eEEEcCCccceeEEEECCCCC-EE
Confidence 78899999999999 9999999999999999987 44 345678899999999999999 89
Q ss_pred EEeeeCCeEEEeecCcc
Q 018697 331 ASLSYDGRVVVESVKPF 347 (351)
Q Consensus 331 ~s~~~dg~v~vw~~~~~ 347 (351)
++++.||.|++|+++..
T Consensus 281 ~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 281 VSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEEETTSEEEEEETTTC
T ss_pred EEecCCCcEEEEECCCC
Confidence 99999999999998753
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-37 Score=276.14 Aligned_cols=256 Identities=12% Similarity=0.082 Sum_probs=195.6
Q ss_pred ecCCcceeeeeeCCCC---------CceEEEEe---------------ecCCcceEEEEEcccccCCCCCCcceeeeeee
Q 018697 62 FSHPNEIWDLSSCPFD---------QRIFSTVF---------------STGESYGAAIWQIPELYGQLNSPQLERIAALD 117 (351)
Q Consensus 62 ~~h~~~v~~i~~~~~~---------~~l~~~~~---------------~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 117 (351)
..+.+.|.+++|+|++ ++|+++.. +++.|++|+||++... .........+.
T Consensus 130 ~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~-----~~~~~~~~~l~ 204 (524)
T 2j04_B 130 YNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTS-----TLHCVKVQTIV 204 (524)
T ss_dssp EECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETT-----TCCEEEEEEEE
T ss_pred EECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCC-----CCCceEEEEEE
Confidence 3478999999999986 56665432 2568899999998721 00111234566
Q ss_pred ccccceeEEEecCCC-----CCcEEEEecCCcEEEEEcCCCCCCcc----c--ccccccCcccceeeeEECCCCCcEEEe
Q 018697 118 AHVGKINCVLWWSSG-----RHDKLVSIDEENIFLWSLDCSNKNAQ----V--QSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (351)
Q Consensus 118 ~h~~~v~~~~~~~~~-----~~~~~~~~~d~~v~iwd~~~~~~~~~----~--~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (351)
.|.+.|.+++|+|++ ..++++++.|++|++||+..+..... . ......+|...|.+++|+++ ..|++|
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasg 283 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCG 283 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEE
Confidence 788999999999972 23466668999999999986532210 0 01123467779999999985 479999
Q ss_pred ecCCeEEEEEcccCCcCc-eeecce---eEEE--EcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCC--ceeEE
Q 018697 187 TCESSVQFWDLRSMGKTN-SIEHAH---VRNV--DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTH--WTWAV 258 (351)
Q Consensus 187 ~~d~~i~iwd~~~~~~~~-~~~~~~---v~~~--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~ 258 (351)
+.||+|++||++++.... .+. .| |.++ +|+|++..+|++++.|++|+|||+++ .+++..+.+|.. .|.++
T Consensus 284 s~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp ETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSCCSCCCE
T ss_pred eCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCcccccccccccCcccce
Confidence 999999999999875443 344 45 9998 67888733899999999999999997 556666766653 58899
Q ss_pred EecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCe
Q 018697 259 CCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGR 338 (351)
Q Consensus 259 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 338 (351)
+|+|++ ..+++++.|++|++||++. +.++.++.+|...|++++|+|+++ +|++|+.|++
T Consensus 362 ~fsp~~-~~l~s~~~d~tv~lwd~~~-------------------~~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgt 420 (524)
T 2j04_B 362 VYCPQI-YSYIYSDGASSLRAVPSRA-------------------AFAVHPLVSRETTITAIGVSRLHP-MVLAGSADGS 420 (524)
T ss_dssp EEETTT-TEEEEECSSSEEEEEETTC-------------------TTCCEEEEECSSCEEEEECCSSCC-BCEEEETTTE
T ss_pred EeCCCc-CeEEEeCCCCcEEEEECcc-------------------cccceeeecCCCceEEEEeCCCCC-eEEEEECCCE
Confidence 999999 8899999999999999998 777888889999999999999999 8999999999
Q ss_pred EEEeecCc
Q 018697 339 VVVESVKP 346 (351)
Q Consensus 339 v~vw~~~~ 346 (351)
|++|++..
T Consensus 421 v~lwd~~~ 428 (524)
T 2j04_B 421 LIITNAAR 428 (524)
T ss_dssp EECCBSCS
T ss_pred EEEEechH
Confidence 99999753
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.5e-36 Score=262.84 Aligned_cols=247 Identities=12% Similarity=0.151 Sum_probs=208.6
Q ss_pred ecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEec
Q 018697 62 FSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141 (351)
Q Consensus 62 ~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 141 (351)
..|.+.|.+++|+|+++.|+++ +.|+.|++|++.. ...+.+..+.+|...|.+++|+|+++. +++++.
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~----~~d~~v~i~~~~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~ 72 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAIC----PNNHEVHIYEKSG-------NKWVQVHELKEHNGQVTGVDWAPDSNR-IVTCGT 72 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEE----CSSSEEEEEEEET-------TEEEEEEEEECCSSCEEEEEEETTTTE-EEEEET
T ss_pred cccCCCeEEEEECCCCCEEEEE----eCCCEEEEEeCCC-------CcEEeeeeecCCCCcccEEEEeCCCCE-EEEEcC
Confidence 4589999999999999888875 7899999999982 122378889999999999999999984 667788
Q ss_pred CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCc---Cceeecce---eEEEE
Q 018697 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK---TNSIEHAH---VRNVD 215 (351)
Q Consensus 142 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~---v~~~~ 215 (351)
|+.|++||+.++...... ....|...+.+++|+|+++++++++.|+.|++||++.+.. ...+...| +.+++
T Consensus 73 dg~i~vwd~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTL---VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp TSCEEEEEEETTEEEEEE---ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred CCeEEEEECCCCeeeeeE---EeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence 999999999764322111 1234566899999999999999999999999999998764 23333344 99999
Q ss_pred cCCCCCcEEEEecCCCeEEEEeccc-----------------CCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEE
Q 018697 216 YDTKKKHLLVTAADESGIHLWDLRM-----------------LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278 (351)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 278 (351)
|+|++. ++++++.|+.|++||++. ..+++..+..|...|.+++|+|++ .+|++++.|+.|+
T Consensus 150 ~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~ 227 (372)
T 1k8k_C 150 WHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDSTVC 227 (372)
T ss_dssp ECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-SEEEEEETTTEEE
T ss_pred EcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC-CEEEEEeCCCEEE
Confidence 999998 899999999999999641 245778888999999999999999 9999999999999
Q ss_pred EEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 279 LWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 279 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+||++. ++++..+..|...|.+++|+|++. +++++ .|+.|++|++..
T Consensus 228 i~d~~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 228 LADADK-------------------KMAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEGGG-------------------TTEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred EEECCC-------------------CceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 999998 888889999999999999999987 67766 899999999876
No 61
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-35 Score=250.76 Aligned_cols=282 Identities=14% Similarity=0.155 Sum_probs=227.0
Q ss_pred ccccceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCc
Q 018697 11 GLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGES 90 (351)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d 90 (351)
.+..+...+..+.+ ++...++.|+ .++.+++|++... .....+..|...|.+++|+|+++.|+++ +.|
T Consensus 13 ~l~~h~~~v~~~~~-~~~~~l~s~~----~dg~v~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~d 80 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDSKVASVS----RDGTVRLWSKDDQ---WLGTVVYTGQGFLNSVCYDSEKELLLFG----GKD 80 (313)
T ss_dssp EECCCSSCEEEEEE-EETTEEEEEE----TTSEEEEEEESSS---EEEEEEEECSSCEEEEEEETTTTEEEEE----ETT
T ss_pred HhhCCCCCcEEEEe-cCCCEEEEEE----cCCcEEEEECCCC---EEEEEeecCCccEEEEEECCCCCEEEEe----cCC
Confidence 34444455666666 6777777764 6899999999553 2345667899999999999999988885 689
Q ss_pred ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccc
Q 018697 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (351)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 170 (351)
+.|++|++... ...+.+..+..|...|.+++|. +. .+++++.|+.|++||.. . ... ....|...
T Consensus 81 g~i~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d~~--~-~~~----~~~~~~~~ 144 (313)
T 3odt_A 81 TMINGVPLFAT------SGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWKEG--S-LVY----NLQAHNAS 144 (313)
T ss_dssp SCEEEEETTCC------TTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETT--E-EEE----EEECCSSC
T ss_pred CeEEEEEeeec------CCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEcCC--c-EEE----ecccCCCc
Confidence 99999998731 1335667788999999999993 44 47777899999999922 1 111 22245668
Q ss_pred eeeeEECC-CCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCccee
Q 018697 171 LSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQ 246 (351)
Q Consensus 171 v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 246 (351)
+.++.|.| +++.+++++.|+.|++||.. +....+...+ +.+++|+|++. +++++.|+.|++||+++ .+++.
T Consensus 145 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~-~~~~~ 219 (313)
T 3odt_A 145 VWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHT-GDVLR 219 (313)
T ss_dssp EEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTT-CCEEE
T ss_pred eeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCc-hhhhh
Confidence 99999988 88999999999999999943 3444444323 99999999986 78899999999999997 67889
Q ss_pred EeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCC
Q 018697 247 ELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSRE 326 (351)
Q Consensus 247 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 326 (351)
.+..|...|++++|+|++ .|++++.|+.|++||++. ++++..+..|...|.+++|+|++
T Consensus 220 ~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~-------------------~~~~~~~~~~~~~i~~~~~~~~~ 278 (313)
T 3odt_A 220 TYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKEN-------------------GSLKQVITLPAISIWSVDCMSNG 278 (313)
T ss_dssp EEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTT-------------------CCEEEEEECSSSCEEEEEECTTS
T ss_pred hhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCC-------------------CceeEEEeccCceEEEEEEccCC
Confidence 999999999999999998 488999999999999998 88888999999999999999999
Q ss_pred CceEEEeeeCCeEEEeecCccc
Q 018697 327 PWIFASLSYDGRVVVESVKPFL 348 (351)
Q Consensus 327 ~~~l~s~~~dg~v~vw~~~~~~ 348 (351)
+ +++++.||.|++|++++..
T Consensus 279 ~--~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 279 D--IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp C--EEEEETTSCEEEEESCGGG
T ss_pred C--EEEEeCCCcEEEEeCCCCc
Confidence 7 5568899999999998643
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.7e-36 Score=263.57 Aligned_cols=256 Identities=14% Similarity=0.186 Sum_probs=209.6
Q ss_pred EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC----C-
Q 018697 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS----G- 132 (351)
Q Consensus 58 ~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~- 132 (351)
...+.+|.+.|.+++|+| +.|+++ +.|+.|++|++..... ......+..+..|...|.+++|+|+ +
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~----~~dg~i~iw~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSC----SGDGYLKVWDNKLLDN---ENPKDKSYSHFVHKSGLHHVDVLQAIERDAF 79 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEE----ETTSEEEEEESBCCTT---CCGGGGEEEEECCTTCEEEEEEEEEEETTTE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEE----cCCCEEEEEECCCccc---ccCCCcceEEecCCCcEEEEEEecccccCCc
Confidence 355678999999999999 566664 7899999999983110 1113367788899999999999999 7
Q ss_pred --CCcEEEEecCCcEEEEEcCCCCCCcccccccccCc-----ccceeeeEEC----CCCCc-EEEeecCCeEEEEEccc-
Q 018697 133 --RHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM-----LHYLSGGAWD----PHDVN-AVAATCESSVQFWDLRS- 199 (351)
Q Consensus 133 --~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~iwd~~~- 199 (351)
. ++++++.|+.|++||+.++.............| ...|.+++|+ |+++. |++++.|+.|++||+++
T Consensus 80 ~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 80 ELC-LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEE-EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred ccc-EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 6 366778899999999997654222222223344 4689999999 99999 99999999999999998
Q ss_pred -----CCcCc-----eeec------ce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC---C---CCc
Q 018697 200 -----MGKTN-----SIEH------AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG---H---THW 254 (351)
Q Consensus 200 -----~~~~~-----~~~~------~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~---~~~ 254 (351)
++.+. .+.. .+ +.+++|+|++ ++++++.|+.|++||+++ .+++..+.. | ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCC
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCc
Confidence 76666 5531 22 9999999999 789999999999999997 678888888 9 999
Q ss_pred eeEEEecCCCCCeEEEeeCC---CeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc-------------ccceEE
Q 018697 255 TWAVCCNPEYDGFILSAGTD---STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD-------------YEDSVY 318 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~ 318 (351)
|.+++|+|++ .+|++++.| +.|++||++. ++++..+.. |...|.
T Consensus 236 i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 295 (397)
T 1sq9_A 236 IRSVKFSPQG-SLLAIAHDSNSFGCITLYETEF-------------------GERIGSLSVPTHSSQASLGEFAHSSWVM 295 (397)
T ss_dssp EEEEEECSST-TEEEEEEEETTEEEEEEEETTT-------------------CCEEEEECBC--------CCBSBSSCEE
T ss_pred cceEEECCCC-CEEEEEecCCCCceEEEEECCC-------------------CcccceeccCcccccccccccccCCcEE
Confidence 9999999999 999999999 9999999998 778888887 999999
Q ss_pred EEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 319 GLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 319 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
+++|+|+++ +|++++.||.|++||+...
T Consensus 296 ~~~~~~~~~-~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 296 SLSFNDSGE-TLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EEEECSSSS-EEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCC-EEEEEeCCCeEEEEEcCCC
Confidence 999999998 8999999999999999754
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9e-36 Score=262.27 Aligned_cols=290 Identities=15% Similarity=0.187 Sum_probs=225.0
Q ss_pred cCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEccccc
Q 018697 23 KADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY 102 (351)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~ 102 (351)
.++++...++.|. .++.|.+|++... .....+.+|.+.|.+++|+|+++.|+++ +.|+.|++||+.
T Consensus 104 ~~~~~~~~l~~~~----~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~----s~d~~i~iwd~~--- 169 (420)
T 3vl1_A 104 TAKLQMRRFILGT----TEGDIKVLDSNFN---LQREIDQAHVSEITKLKFFPSGEALISS----SQDMQLKIWSVK--- 169 (420)
T ss_dssp EECSSSCEEEEEE----TTSCEEEECTTSC---EEEEETTSSSSCEEEEEECTTSSEEEEE----ETTSEEEEEETT---
T ss_pred EEecCCCEEEEEE----CCCCEEEEeCCCc---ceeeecccccCccEEEEECCCCCEEEEE----eCCCeEEEEeCC---
Confidence 4566777777764 5788999987642 2334556899999999999999988875 689999999998
Q ss_pred CCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccc-------------------
Q 018697 103 GQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ------------------- 163 (351)
Q Consensus 103 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~------------------- 163 (351)
..+.+..+.+|...|.+++|+|++.. +++++.|+.|++||+.++.....+....
T Consensus 170 ------~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 170 ------DGSNPRTLIGHRATVTDIAIIDRGRN-VLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp ------TCCCCEEEECCSSCEEEEEEETTTTE-EEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred ------CCcCceEEcCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 56777888999999999999999984 6677899999999998754333322111
Q ss_pred ccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEeccc
Q 018697 164 SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (351)
Q Consensus 164 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (351)
...+...+.+++|+|+++++++++.||.|++||+++++....+...| +.+++|+|+++.++++|+.||.|++||+++
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 00123466777889999999999999999999999988777776554 999999999986899999999999999998
Q ss_pred CCcceeEeeC-CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEE
Q 018697 241 LKAPIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG 319 (351)
Q Consensus 241 ~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 319 (351)
...++..+.. |...|.++.+ +++ .+|++++.|+.|++||+......... ........+..|...|.+
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~-~~~-~~l~s~~~d~~v~iw~~~~~~~~~~~----------~~~~~~~~~~~~~~~v~~ 390 (420)
T 3vl1_A 323 PECPVGEFLINEGTPINNVYF-AAG-ALFVSSGFDTSIKLDIISDPESERPA----------IEFETPTFLVSNDDAVSQ 390 (420)
T ss_dssp TTSCSEEEEESTTSCEEEEEE-ETT-EEEEEETTTEEEEEEEECCTTCCSCE----------ECTTSCEEECCSSCCCCE
T ss_pred CcCchhhhhccCCCCceEEEe-CCC-CEEEEecCCccEEEEeccCCCCCccc----------eeccCccEEccCCcceEE
Confidence 6566777776 6778888855 567 89999999999999999862111000 001222335577888999
Q ss_pred EEeCCCCC---ceEEEeeeCCeEEEeecCc
Q 018697 320 LAWSSREP---WIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 320 ~~~~~~~~---~~l~s~~~dg~v~vw~~~~ 346 (351)
++|+|+++ . +++++.+|.+.+|+++.
T Consensus 391 ~~~s~~~~~~g~-l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 391 FCYVSDDESNGE-VLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEECCSSSSCE-EEEEETTTEEEEEESCC
T ss_pred EEEccCCCCcce-EEEEcCCceEEEEeccC
Confidence 99999987 4 55566689999999864
No 64
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.8e-36 Score=261.31 Aligned_cols=269 Identities=16% Similarity=0.202 Sum_probs=209.8
Q ss_pred EeeecCCcceeeeeeCC-CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee-------------ecccccee
Q 018697 59 EGLFSHPNEIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL-------------DAHVGKIN 124 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-------------~~h~~~v~ 124 (351)
..+.+|.+.|.+++|+| +++.|+++ +.|+.|++|++.. ......+ .+|...|.
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~----~~dg~i~iw~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 103 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSG----GSDGVIVLYDLEN---------SSRQSYYTCKAVCSIGRDHPDVHRYSVE 103 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEE----ETTSCEEEEECCC---------CSSSSCEEECEEEEECTTCTTCCSSCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEE----cCCCeEEEEECCC---------CcccceEeccccccccccccccCCCcEE
Confidence 44567999999999999 88888875 6899999999983 2222222 25999999
Q ss_pred EEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCC---CcEEEeecCCeEEEEEcccCC
Q 018697 125 CVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD---VNAVAATCESSVQFWDLRSMG 201 (351)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~ 201 (351)
+++|+|++..++++++.|+.|++||+.++....... +...+.++.|+|.+ ..+++++.++.|++||+++++
T Consensus 104 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 104 TVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp EEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred EEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 999999555457777889999999998654332222 23478899998854 489999999999999999988
Q ss_pred cCceeecce--eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe---------------eCCCCceeEEEecCCC
Q 018697 202 KTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL---------------PGHTHWTWAVCCNPEY 264 (351)
Q Consensus 202 ~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~ 264 (351)
....+.... |.+++|+|++++++++++.||.|++||++....++..+ ..|...|.+++|+|++
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 257 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG 257 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC
Confidence 887776222 99999999998779999999999999998755455554 5788999999999999
Q ss_pred CCeEEEeeCCCeEEEEEcCCCCCCCCCCccc----------------------------ccCCcccccccceeeccccce
Q 018697 265 DGFILSAGTDSTVNLWLVSTSNHDELPSESL----------------------------VESPNQRANSLLNSYSDYEDS 316 (351)
Q Consensus 265 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~ 316 (351)
.+|++++.|+.|++||+............. ...++...++++..+.+|...
T Consensus 258 -~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 336 (408)
T 4a11_B 258 -LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT 336 (408)
T ss_dssp -SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC
T ss_pred -CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe
Confidence 999999999999999998754321110000 000111345677788889999
Q ss_pred EEEEEeCCCCCceEEEeeeCCeEEEeecCccc
Q 018697 317 VYGLAWSSREPWIFASLSYDGRVVVESVKPFL 348 (351)
Q Consensus 317 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~ 348 (351)
|++++|+|+++ +|++++.||.|++|+++...
T Consensus 337 v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 337 VDCCVFQSNFQ-ELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEEEETTTT-EEEEEETTSCEEEEEECC--
T ss_pred EEEEEEcCCCC-EEEEECCCCeEEEEeCCCCC
Confidence 99999999998 89999999999999998643
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.6e-36 Score=267.15 Aligned_cols=276 Identities=11% Similarity=0.137 Sum_probs=219.1
Q ss_pred eecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEccc
Q 018697 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPE 100 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~ 100 (351)
.+.+++++..++.|.. ++.+++|++...... ..+..| ..+....|+|+++.|+++ +.|+.|++||+.
T Consensus 61 ~~~~s~~g~~l~~~~~----d~~v~i~d~~~~~~~---~~~~~~-~~~~~~~~~~~~~~l~~~----~~dg~i~iwd~~- 127 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARL----DGHDFLFNTIIRDGS---KMLKRA-DYTAVDTAKLQMRRFILG----TTEGDIKVLDSN- 127 (420)
T ss_dssp TCEEEEEETTEEEEEE----TTEEEEEECCSEETT---TTSCSC-CEEEEEEECSSSCEEEEE----ETTSCEEEECTT-
T ss_pred ceeeeecCCeEEEEEc----CCcEEEEEeccccee---eEEecC-CceEEEEEecCCCEEEEE----ECCCCEEEEeCC-
Confidence 4556677777877753 789999997653221 122233 445555789999888875 689999999988
Q ss_pred ccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCC
Q 018697 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 180 (351)
..+....+..|...|.+++|+|++.. +++++.|+.|++||+.++.....+ .+|...|.+++|+|++
T Consensus 128 --------~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~d~~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 128 --------FNLQREIDQAHVSEITKLKFFPSGEA-LISSSQDMQLKIWSVKDGSNPRTL-----IGHRATVTDIAIIDRG 193 (420)
T ss_dssp --------SCEEEEETTSSSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTCCCCEEE-----ECCSSCEEEEEEETTT
T ss_pred --------CcceeeecccccCccEEEEECCCCCE-EEEEeCCCeEEEEeCCCCcCceEE-----cCCCCcEEEEEEcCCC
Confidence 56777777899999999999999983 677789999999999976544332 3567799999999999
Q ss_pred CcEEEeecCCeEEEEEcccCCcCceeecc-------------------------e-eEEEEcCCCCCcEEEEecCCCeEE
Q 018697 181 VNAVAATCESSVQFWDLRSMGKTNSIEHA-------------------------H-VRNVDYDTKKKHLLVTAADESGIH 234 (351)
Q Consensus 181 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------------------~-v~~~~~~~~~~~~l~~~~~dg~i~ 234 (351)
+.|++++.|+.|++||+++++....+... . +.+++|+|+++ ++++|+.||.|+
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~ 272 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVIT 272 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEE
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEE
Confidence 99999999999999999988877666521 1 44566789998 899999999999
Q ss_pred EEecccCCcceeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccc-ccceeecc
Q 018697 235 LWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN-SLLNSYSD 312 (351)
Q Consensus 235 i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 312 (351)
+||++... .+..+ ..|...|.+++|+|+++.+|++++.||.|++||++. + .++..+..
T Consensus 273 i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~-------------------~~~~~~~~~~ 332 (420)
T 3vl1_A 273 VHNVFSKE-QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS-------------------PECPVGEFLI 332 (420)
T ss_dssp EEETTTCC-EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC-------------------TTSCSEEEEE
T ss_pred EEECCCCc-eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC-------------------CcCchhhhhc
Confidence 99999844 44444 468899999999999933999999999999999997 4 34666666
Q ss_pred -ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 313 -YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 313 -~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
|...|.++.|. ++. +|++++.|+.|++|++..
T Consensus 333 ~~~~~v~~~~~~-~~~-~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 333 NEGTPINNVYFA-AGA-LFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp STTSCEEEEEEE-TTE-EEEEETTTEEEEEEEECC
T ss_pred cCCCCceEEEeC-CCC-EEEEecCCccEEEEeccC
Confidence 67778888665 566 899999999999999875
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-35 Score=282.67 Aligned_cols=285 Identities=16% Similarity=0.249 Sum_probs=244.6
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~ 94 (351)
....+..+.++|++..+++|. .++.|.+|++.... ....+.+|.+.|.+++|+|+++.|+++ +.|+.|+
T Consensus 12 h~~~v~~i~~sp~~~~la~~~----~~g~v~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~dg~i~ 80 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEPWVLTTL----YSGRVEIWNYETQV---EVRSIQVTETPVRAGKFIARKNWIIVG----SDDFRIR 80 (814)
T ss_dssp ECSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTTE---EEEEEECCSSCEEEEEEEGGGTEEEEE----ETTSEEE
T ss_pred CCCceEEEEECCCCCEEEEEe----CCCEEEEEECCCCc---eEEEEecCCCcEEEEEEeCCCCEEEEE----eCCCeEE
Confidence 445677888999999999875 57899999986632 345677899999999999999998885 6899999
Q ss_pred EEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeee
Q 018697 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (351)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (351)
+|++. +.+.+..+..|...|.+++|+|+++. +++++.|+.|++||+.++...... ..+|...+.++
T Consensus 81 vw~~~---------~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~----~~~~~~~v~~~ 146 (814)
T 3mkq_A 81 VFNYN---------TGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQT----FEGHEHFVMCV 146 (814)
T ss_dssp EEETT---------TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSEEEEE----EECCSSCEEEE
T ss_pred EEECC---------CCcEEEEEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCceEEEE----EcCCCCcEEEE
Confidence 99998 67788889999999999999999984 667788999999999864322222 23566789999
Q ss_pred EECC-CCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCC--CCCcEEEEecCCCeEEEEecccCCcceeEe
Q 018697 175 AWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDT--KKKHLLVTAADESGIHLWDLRMLKAPIQEL 248 (351)
Q Consensus 175 ~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 248 (351)
+|+| ++..+++++.|+.|++||++++.....+...+ +.+++|+| ++. ++++++.||.|++||++. .+++..+
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~ 224 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQT-KSCVATL 224 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTT-TEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCC-CcEEEEE
Confidence 9999 78899999999999999999888777776443 99999999 887 899999999999999987 6788889
Q ss_pred eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCc
Q 018697 249 PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPW 328 (351)
Q Consensus 249 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 328 (351)
.+|...|.+++|+|++ .+|++++.||.|++||+.. ++.+..+..|...+.+++|+|++..
T Consensus 225 ~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 225 EGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSST-------------------YKVEKTLNVGLERSWCIATHPTGRK 284 (814)
T ss_dssp ECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT-------------------CSEEEEECCSSSSEEEEEECTTCGG
T ss_pred cCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCC-------------------CcEEEEeecCCCcEEEEEEccCCCc
Confidence 9999999999999999 8999999999999999998 8888899999999999999999876
Q ss_pred eEEEeeeCCeEEEeecCc
Q 018697 329 IFASLSYDGRVVVESVKP 346 (351)
Q Consensus 329 ~l~s~~~dg~v~vw~~~~ 346 (351)
++++++.|+.+.+|++..
T Consensus 285 ~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 285 NYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp GEEEEEETTEEEEEECSC
T ss_pred eEEEEEeCCCEEEEEcCC
Confidence 656667788899998764
No 67
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.8e-35 Score=251.67 Aligned_cols=252 Identities=15% Similarity=0.244 Sum_probs=204.5
Q ss_pred EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEE
Q 018697 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 58 ~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 137 (351)
...+.+|.+.|++|+|+|++..++++ ++.|++|+|||+.... .....+...+.+|...|.+++|+|+++. ++
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S---~s~D~~i~vWd~~~~~----~~~~~~~~~l~~h~~~V~~~~~s~dg~~-l~ 102 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILS---ASRDKTIIMWKLTRDE----TNYGIPQRALRGHSHFVSDVVISSDGQF-AL 102 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEE---EETTSCEEEEEECCSS----SCSEEEEEEECCCSSCEEEEEECTTSSE-EE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEE---EcCCCeEEEEECCCCC----cccceeeEEEeCCCCCEEEEEECCCCCE-EE
Confidence 35688999999999999986544443 3799999999987321 1134567788999999999999999984 66
Q ss_pred EEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEE
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~ 214 (351)
+++.|+.|++|+.......... ..+...+....++++++.+++++.|+.+++||+...........+| +..+
T Consensus 103 s~~~d~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~ 177 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGTTTRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV 177 (340)
T ss_dssp EEETTSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEE
T ss_pred EEcccccceEEeecccceeeee-----cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccce
Confidence 7789999999999854322222 1234478888999999999999999999999988655443333344 8899
Q ss_pred EcCCCCC-cEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCc
Q 018697 215 DYDTKKK-HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE 293 (351)
Q Consensus 215 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 293 (351)
+|++++. .++++++.|+.|++||++. .+.+..+.+|..+|++++|+|++ .+|++++.|+.|++||++.
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~iwd~~~--------- 246 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDG-SLCASGGKDGQAMLWDLNE--------- 246 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTS-SEEEEEETTCEEEEEETTT---------
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCC-CEEEEEeCCCeEEEEEecc---------
Confidence 9988754 3678899999999999997 67888899999999999999999 9999999999999999998
Q ss_pred ccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 294 SLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
.+++..+..+ ..|..+.|+|++. +++++.|+.|++||++.
T Consensus 247 ----------~~~~~~~~~~-~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 247 ----------GKHLYTLDGG-DIINALCFSPNRY--WLCAATGPSIKIWDLEG 286 (340)
T ss_dssp ----------TEEEEEEECS-SCEEEEEECSSSS--EEEEEETTEEEEEETTT
T ss_pred ----------CceeeeecCC-ceEEeeecCCCCc--eeeccCCCEEEEEECCC
Confidence 7777777655 5699999999875 66777899999999875
No 68
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-35 Score=252.39 Aligned_cols=252 Identities=14% Similarity=0.153 Sum_probs=214.8
Q ss_pred CCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCC
Q 018697 53 GTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSG 132 (351)
Q Consensus 53 ~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 132 (351)
+.......+.+|.+.|.+++|+|+++.|+++ +.|+.|++||+. ..+.+..+..|...|.+++|+|++
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~----~~dg~i~vwd~~---------~~~~~~~~~~h~~~v~~~~~~~~~ 86 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSC----SKDSSASVWYSL---------NGERLGTLDGHTGTIWSIDVDCFT 86 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSCEEEEE----ESSSCEEEEETT---------TCCEEEEECCCSSCEEEEEECTTS
T ss_pred ccccccEEEEEeeceEEEEEEcCCCCEEEEE----eCCCEEEEEeCC---------CchhhhhhhhcCCcEEEEEEcCCC
Confidence 4456667788999999999999999988885 689999999998 668888999999999999999998
Q ss_pred CCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC-----CeEEEEEcccCCcCceee
Q 018697 133 RHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSMGKTNSIE 207 (351)
Q Consensus 133 ~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~ 207 (351)
+. +++++.|+.|++||+.++....... +...+.+++|+|+++.+++++.+ +.|++||++.......+.
T Consensus 87 ~~-l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 159 (369)
T 3zwl_B 87 KY-CVTGSADYSIKLWDVSNGQCVATWK------SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELT 159 (369)
T ss_dssp SE-EEEEETTTEEEEEETTTCCEEEEEE------CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE
T ss_pred CE-EEEEeCCCeEEEEECCCCcEEEEee------cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeec
Confidence 84 6677889999999998755433332 34489999999999999999988 999999998775432221
Q ss_pred c----------c-----eeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEee
Q 018697 208 H----------A-----HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 208 ~----------~-----~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 272 (351)
. . .+.+++|+|+++ ++++++.||.|++||++....++..+..|...|.+++|+|++ .+|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~ 237 (369)
T 3zwl_B 160 KVSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL-TYFITSS 237 (369)
T ss_dssp EECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS-SEEEEEE
T ss_pred ccccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC-CEEEEec
Confidence 0 1 289999999998 799999999999999997567788899999999999999999 9999999
Q ss_pred CCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCC--------------e
Q 018697 273 TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDG--------------R 338 (351)
Q Consensus 273 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--------------~ 338 (351)
.|+.|++||++. ++.+..+. +...+..++|+|+++ ++++++.++ .
T Consensus 238 ~d~~i~v~d~~~-------------------~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 296 (369)
T 3zwl_B 238 RDTNSFLVDVST-------------------LQVLKKYE-TDCPLNTAVITPLKE-FIILGGGQEAKDVTTTSANEGKFE 296 (369)
T ss_dssp TTSEEEEEETTT-------------------CCEEEEEE-CSSCEEEEEECSSSS-EEEEEECCC-------------CE
T ss_pred CCceEEEEECCC-------------------Cceeeeec-CCCCceeEEecCCCc-eEEEeecCCCceEEEEecCCCcce
Confidence 999999999998 77777776 667899999999999 788888887 8
Q ss_pred EEEeecCcc
Q 018697 339 VVVESVKPF 347 (351)
Q Consensus 339 v~vw~~~~~ 347 (351)
+++|++...
T Consensus 297 i~~~d~~~~ 305 (369)
T 3zwl_B 297 ARFYHKIFE 305 (369)
T ss_dssp EEEEETTTC
T ss_pred eEEEecCCC
Confidence 999998653
No 69
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-36 Score=265.52 Aligned_cols=275 Identities=16% Similarity=0.254 Sum_probs=213.9
Q ss_pred CCCCEEEEEEeCCCCCe-EEEEeeecCCcceeeeeeCC-CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee
Q 018697 39 KEENEVHLLRLSSGGTE-LICEGLFSHPNEIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL 116 (351)
Q Consensus 39 ~~~~~i~~~~~~~~~~~-~~~~~~~~h~~~v~~i~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~ 116 (351)
..++.|.+|++...+.. .....+.+|.+.|.+++|+| ++..|+++ +.|+.|+||++..... .....+++..+
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~----s~dg~v~vw~~~~~~~--~~~~~~~~~~~ 127 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASG----SEDCTVMVWEIPDGGL--VLPLREPVITL 127 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEE----ETTSEEEEEECCTTCC--SSCBCSCSEEE
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEE----eCCCeEEEEEccCCCC--ccccCCceEEe
Confidence 46789999998764321 12244678999999999999 77777664 7899999999983100 00011567788
Q ss_pred eccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEE
Q 018697 117 DAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWD 196 (351)
Q Consensus 117 ~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 196 (351)
.+|...|.+++|+|++..++++++.|+.|++||+.++.....+. ..+|...|.+++|+|+++.|++++.|+.|++||
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG---PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIE 204 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC---TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe---cCCCCCceEEEEECCCCCEEEEEecCCcEEEEe
Confidence 89999999999999986557777899999999998654332221 134667999999999999999999999999999
Q ss_pred cccCCcCceeecce----eEEEEcCCCCCcEEEEe---cCCCeEEEEecccCCcceeEee-CCCCceeEEEecCCCCCeE
Q 018697 197 LRSMGKTNSIEHAH----VRNVDYDTKKKHLLVTA---ADESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCNPEYDGFI 268 (351)
Q Consensus 197 ~~~~~~~~~~~~~~----v~~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l 268 (351)
+++++.+..+...| +.+++|+|++. ++++| +.|+.|++||++....++.... .|...+.+++|+|++ .+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l 282 (402)
T 2aq5_A 205 PRKGTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDT-NIV 282 (402)
T ss_dssp TTTTEEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTT-TEE
T ss_pred CCCCceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCC-CEE
Confidence 99988877773344 78999999997 78888 7999999999998555454444 577889999999999 666
Q ss_pred E-EeeCCCeEEEEEcCCCCCCCCCCcccccCCccccccc-ceeecc--ccceEEEEEeCCCCCceEEEeeeCCeEEEeec
Q 018697 269 L-SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL-LNSYSD--YEDSVYGLAWSSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 269 ~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
+ +++.|+.|++||+.. ++. +..+.. |...|.+++|+|++. ++++ .++.+++|++
T Consensus 283 ~~~g~~dg~i~i~d~~~-------------------~~~~~~~l~~~~~~~~v~~~~~sp~~~-~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITS-------------------EAPFLHYLSMFSSKESQRGMGYMPKRG-LEVN--KCEIARFYKL 340 (402)
T ss_dssp EEEETTCSCEEEEEECS-------------------STTCEEEEEEECCSSCCSEEEECCGGG-SCGG--GTEEEEEEEE
T ss_pred EEEEcCCCeEEEEEecC-------------------CCcceEeecccccCCcccceEEecccc-ccee--cceeEEEEEc
Confidence 5 666899999999997 443 444443 458899999999988 5543 5679999998
Q ss_pred Cc
Q 018697 345 KP 346 (351)
Q Consensus 345 ~~ 346 (351)
.+
T Consensus 341 ~~ 342 (402)
T 2aq5_A 341 HE 342 (402)
T ss_dssp ET
T ss_pred CC
Confidence 65
No 70
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-35 Score=276.65 Aligned_cols=251 Identities=17% Similarity=0.256 Sum_probs=204.6
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 138 (351)
..+.+|.+.|++++|+|++..++++ ++.|++|++|++.... .........+.+|...|.+++|+|+++. +++
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s---~s~D~~i~~W~~~~~~----~~~~~~~~~~~~h~~~v~~v~~s~~g~~-l~s 447 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVS---ASRDKSIILWKLTKDD----KAYGVAQRRLTGHSHFVEDVVLSSDGQF-ALS 447 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEE---EETTSEEEEEECCCST----TCSCEEEEEEECCSSCEEEEEECTTSSE-EEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEE---EeCCCcEEEEEccCCC----cccccccceecCCCCcEEEEEECCCCCE-EEE
Confidence 4578999999999999987655554 4899999999987311 1123456678899999999999999984 667
Q ss_pred EecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee--cce---eEE
Q 018697 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE--HAH---VRN 213 (351)
Q Consensus 139 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~---v~~ 213 (351)
++.|++|++||+.++.... ...+|...|.+++|+|+++.|++++.|++|++||+.......... .+| |.+
T Consensus 448 gs~Dg~v~vwd~~~~~~~~-----~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 522 (694)
T 3dm0_A 448 GSWDGELRLWDLAAGVSTR-----RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 522 (694)
T ss_dssp EETTSEEEEEETTTTEEEE-----EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEE
T ss_pred EeCCCcEEEEECCCCccee-----EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEE
Confidence 7899999999998653322 234677899999999999999999999999999986543221111 234 999
Q ss_pred EEcCCCCC-cEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCC
Q 018697 214 VDYDTKKK-HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPS 292 (351)
Q Consensus 214 ~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 292 (351)
++|+|++. .++++++.|+.|++||++. .+....+.+|...|++++|+|++ .+|++++.|+.|++||++.
T Consensus 523 ~~~~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~-------- 592 (694)
T 3dm0_A 523 VRFSPNTLQPTIVSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAE-------- 592 (694)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTT--------
T ss_pred EEEeCCCCcceEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCC--------
Confidence 99999873 3799999999999999997 66788899999999999999999 9999999999999999998
Q ss_pred cccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 293 ESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++.+..+..+ ..|.+++|+|++. ++++ +.|+.|++||+.+
T Consensus 593 -----------~~~~~~~~~~-~~v~~~~~sp~~~-~l~~-~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 593 -----------GKKLYSLEAN-SVIHALCFSPNRY-WLCA-ATEHGIKIWDLES 632 (694)
T ss_dssp -----------TEEEECCBCS-SCEEEEEECSSSS-EEEE-EETTEEEEEETTT
T ss_pred -----------CceEEEecCC-CcEEEEEEcCCCc-EEEE-EcCCCEEEEECCC
Confidence 7777777554 5699999999987 5555 4577899999975
No 71
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=253.25 Aligned_cols=252 Identities=12% Similarity=0.176 Sum_probs=201.5
Q ss_pred eEEEEeeecCCcceeeeeeCCCCCceEEEEeecCC---cceEEEEEcccccCCCCCCcceeee-eeeccccceeEEEecC
Q 018697 55 ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE---SYGAAIWQIPELYGQLNSPQLERIA-ALDAHVGKINCVLWWS 130 (351)
Q Consensus 55 ~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~ 130 (351)
.+......+|...|.+++|+|++..++++ ++. |+.|++|++. ..+... ....|...|.+++|+|
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~---~s~~~~d~~v~iw~~~---------~~~~~~~~~~~~~~~v~~~~~~~ 75 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTM---GNFARGTGVIQLYEIQ---------HGDLKLLREIEKAKPIKCGTFGA 75 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEE---EC--CCCEEEEEEEEC---------SSSEEEEEEEEESSCEEEEECTT
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEe---cCccCCCcEEEEEeCC---------CCcccceeeecccCcEEEEEEcC
Confidence 34445567899999999999999888876 354 9999999998 333322 2337899999999999
Q ss_pred C---CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeee------EECCCCCcEEEeecCCeEEEEEcccCC
Q 018697 131 S---GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG------AWDPHDVNAVAATCESSVQFWDLRSMG 201 (351)
Q Consensus 131 ~---~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~~l~~~~~d~~i~iwd~~~~~ 201 (351)
+ +. ++++++.|+.|++||+.++...... ..+|...|.++ +|+|+++.|++++.|+.|++||+++++
T Consensus 76 ~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 76 TSLQQR-YLATGDFGGNLHIWNLEAPEMPVYS----VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp CCTTTC-CEEEEETTSCEEEECTTSCSSCSEE----ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred CCCCCc-eEEEecCCCeEEEEeCCCCCccEEE----EEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 9 45 4777788999999999976522222 23567789999 457899999999999999999999886
Q ss_pred -cCceeec--c----eeEEEE----cCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecC---CCCCe
Q 018697 202 -KTNSIEH--A----HVRNVD----YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNP---EYDGF 267 (351)
Q Consensus 202 -~~~~~~~--~----~v~~~~----~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~ 267 (351)
....+.. + .+.+++ |+|++. ++++++.|+.|++||++. .+. .....|...|.+++|+| ++ .+
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~-~~ 226 (357)
T 3i2n_A 151 DPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISM-NK 226 (357)
T ss_dssp SCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSC-CE
T ss_pred CcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCC-CE
Confidence 4555531 1 177777 889998 899999999999999997 444 44456889999999999 88 99
Q ss_pred EEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeec-----cccceEEEEEeCCCCCceEEEeeeCCeEEEe
Q 018697 268 ILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-----DYEDSVYGLAWSSREPWIFASLSYDGRVVVE 342 (351)
Q Consensus 268 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw 342 (351)
|++++.|+.|++||++. .+.+..+. .|...|++++|+|+++.+|++++.||.|++|
T Consensus 227 l~~~~~dg~i~i~d~~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 287 (357)
T 3i2n_A 227 LVATSLEGKFHVFDMRT-------------------QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLW 287 (357)
T ss_dssp EEEEESTTEEEEEEEEE-------------------EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred EEEECCCCeEEEEeCcC-------------------CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEe
Confidence 99999999999999987 55555544 8999999999999987679999999999999
Q ss_pred ecCc
Q 018697 343 SVKP 346 (351)
Q Consensus 343 ~~~~ 346 (351)
+++.
T Consensus 288 d~~~ 291 (357)
T 3i2n_A 288 KYEY 291 (357)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 9874
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-36 Score=265.53 Aligned_cols=307 Identities=8% Similarity=0.109 Sum_probs=214.6
Q ss_pred ccceeEeeeecCCC-CcceEEEeeeeeCCCCEEEEEEeCC---CCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecC
Q 018697 13 KYQARCISDVKADT-DHTSFLTGTLSLKEENEVHLLRLSS---GGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG 88 (351)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~ 88 (351)
+.+...|..+.+++ +...++.|+ .++.|++|++.. .. ........+|...|.+++|+|++..|+++ +
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s----~dg~v~vwd~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~----s 130 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGS----DQGVIKIWNLKEIIVGE-VYSSSLTYDCSSTVTQITMIPNFDAFAVS----S 130 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEE----TTSEEEEEEHHHHHTTC-CCSCSEEEECSSCEEEEEECTTSSEEEEE----E
T ss_pred cCCCCceEEEEECCCCCCEEEEec----CCceEEEeECcccccCc-ccceeeeccCCCCEEEEEEeCCCCEEEEE----e
Confidence 33456677888888 777888775 689999999875 22 11112223699999999999999888885 6
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeec------------cccceeEEE--ecCCCCCcEEEEecCCcEEEEEcCCCC
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDA------------HVGKINCVL--WWSSGRHDKLVSIDEENIFLWSLDCSN 154 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~------------h~~~v~~~~--~~~~~~~~~~~~~~d~~v~iwd~~~~~ 154 (351)
.|+.|++||+.... ..+....+.. +...+.++. +++++. ++++++.|+.|++||+.++.
T Consensus 131 ~dg~i~vwd~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 131 KDGQIIVLKVNHYQ------QESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp TTSEEEEEEEEEEE------ETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCC
T ss_pred CCCEEEEEEecccc------CCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCe
Confidence 99999999985210 1222222221 445566666 456676 36777889999999998754
Q ss_pred CCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEc----CCCCCcEEEEe
Q 018697 155 KNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDY----DTKKKHLLVTA 227 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~----~~~~~~~l~~~ 227 (351)
....+... .|...|.+++|+|++++|++++.||.|++||+++++.+..+...+ |.+++| +|++. ++++|
T Consensus 204 ~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~ 279 (437)
T 3gre_A 204 RLQIIENS---PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSV-IVVGG 279 (437)
T ss_dssp EEEEEECC---GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEE-EEEEE
T ss_pred eeEEEccC---CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCcc-EEEEE
Confidence 43333221 256699999999999999999999999999999988877775333 999944 55676 89999
Q ss_pred cCCCeEEEEecccCCcceeEeeC--------------------------CCCceeEEEecCCCCCeEEEeeCCCeEEEEE
Q 018697 228 ADESGIHLWDLRMLKAPIQELPG--------------------------HTHWTWAVCCNPEYDGFILSAGTDSTVNLWL 281 (351)
Q Consensus 228 ~~dg~i~i~d~~~~~~~~~~~~~--------------------------~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd 281 (351)
+.|+.|++||+++ .+.+..+.+ |...|++++|+ ++ .+|++++.|+.|++||
T Consensus 280 ~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd 356 (437)
T 3gre_A 280 SSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMFS 356 (437)
T ss_dssp STTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEE
T ss_pred cCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEEE
Confidence 9999999999987 555555553 45568888888 66 8999999999999999
Q ss_pred cCCCCCCCCCCccc----ccC--------------CcccccccceeeccccceEEEEEeCCC--CCceEEEeeeCCeEEE
Q 018697 282 VSTSNHDELPSESL----VES--------------PNQRANSLLNSYSDYEDSVYGLAWSSR--EPWIFASLSYDGRVVV 341 (351)
Q Consensus 282 ~~~~~~~~~~~~~~----~~~--------------~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~v~v 341 (351)
+............. ... ..............|...|++++|+++ +. +|++++.||.|+|
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~-~l~s~~~dG~I~i 435 (437)
T 3gre_A 357 LNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETP-LLVACDNSGLIGI 435 (437)
T ss_dssp TTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSE-EEEEEETTSCEEE
T ss_pred CCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCce-EEEEEcCCceEEE
Confidence 98732211100000 000 000001112223348899999999998 55 8999999999999
Q ss_pred ee
Q 018697 342 ES 343 (351)
Q Consensus 342 w~ 343 (351)
|+
T Consensus 436 w~ 437 (437)
T 3gre_A 436 FQ 437 (437)
T ss_dssp EC
T ss_pred eC
Confidence 95
No 73
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.9e-35 Score=249.13 Aligned_cols=277 Identities=12% Similarity=0.094 Sum_probs=228.0
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCC-ceEEEEeecCCcceE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQ-RIFSTVFSTGESYGA 93 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~-~l~~~~~~~~~d~~i 93 (351)
+...+..+.++++...++.|. .++.|.+|++.............+|...|.+++|+|+++ .|+++ +.|+.|
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----~~dg~i 81 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITS----WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG----TVQGEI 81 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEE----TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE----ETTSCE
T ss_pred CCCcEEEEEEcCCCCEEEEEc----CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEE----cCCCeE
Confidence 345577777888888888774 579999999998775555666779999999999999998 77775 689999
Q ss_pred EEEEc-ccccCCCCCCcceeeeeeec--cccceeEEEecCCCCCcEEEEecCCcEEEEEcCC---------CCCCccccc
Q 018697 94 AIWQI-PELYGQLNSPQLERIAALDA--HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDC---------SNKNAQVQS 161 (351)
Q Consensus 94 ~vw~~-~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~---------~~~~~~~~~ 161 (351)
++|++ . .. ....+.. |...|.+++|+| +. .+++++.|+.|++||+.+ ......+
T Consensus 82 ~~wd~~~---------~~-~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-- 147 (342)
T 1yfq_A 82 LKVDLIG---------SP-SFQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-- 147 (342)
T ss_dssp EEECSSS---------SS-SEEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--
T ss_pred EEEEecc---------CC-ceEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEE--
Confidence 99999 6 22 3366778 999999999999 66 477778999999999985 3322221
Q ss_pred ccccCcccceeeeEECCCCCcEEEeecCCeEEEEEccc-CCcCc-eeecce---eEEEEcCC-CCCcEEEEecCCCeEEE
Q 018697 162 KQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS-MGKTN-SIEHAH---VRNVDYDT-KKKHLLVTAADESGIHL 235 (351)
Q Consensus 162 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~-~~~~~~---v~~~~~~~-~~~~~l~~~~~dg~i~i 235 (351)
.|...+.+++|+|++ +++++.++.|++||+++ +.... .....+ +.+++|+| ++. ++++++.||.|++
T Consensus 148 ----~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i 220 (342)
T 1yfq_A 148 ----KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAV 220 (342)
T ss_dssp ----SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEE
T ss_pred ----eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEE
Confidence 145589999999877 99999999999999998 55432 222233 99999999 998 8999999999999
Q ss_pred EecccC-----CcceeEeeCCCC---------ceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcc
Q 018697 236 WDLRML-----KAPIQELPGHTH---------WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQ 301 (351)
Q Consensus 236 ~d~~~~-----~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (351)
|+++.. .+....+..|.. .|.+++|+|++ .+|++++.||.|++||+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~~~----------------- 282 (342)
T 1yfq_A 221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQT----------------- 282 (342)
T ss_dssp EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTT-----------------
T ss_pred EEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEEcCcc-----------------
Confidence 999874 267888888865 99999999999 9999999999999999998
Q ss_pred cccccceeeccc-cceEEEEEeCCCCCceEEEeeeCCe-EEEee
Q 018697 302 RANSLLNSYSDY-EDSVYGLAWSSREPWIFASLSYDGR-VVVES 343 (351)
Q Consensus 302 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~-v~vw~ 343 (351)
++++..+..| ...|.+++ |++. +|++++.||. .+.|.
T Consensus 283 --~~~~~~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 283 --RKKIKNFAKFNEDSVVKIA--CSDN-ILCLATSDDTFKTNAA 321 (342)
T ss_dssp --TEEEEECCCCSSSEEEEEE--ECSS-EEEEEEECTHHHHCSS
T ss_pred --HhHhhhhhcccCCCceEec--CCCC-eEEEEecCCccccccc
Confidence 8888899998 99999999 9988 8999999998 55444
No 74
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=256.84 Aligned_cols=314 Identities=17% Similarity=0.304 Sum_probs=220.4
Q ss_pred eeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCC--------eEEEEeeecCC------------cceeeeeeCC
Q 018697 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGT--------ELICEGLFSHP------------NEIWDLSSCP 75 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~--------~~~~~~~~~h~------------~~v~~i~~~~ 75 (351)
...|..+.+++++..++.|. .++.|++|++..... ......+.+|. ..|.+++|+|
T Consensus 28 ~~~V~~v~~s~~g~~la~g~----~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGD----KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEE----TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cCcEEEEEECCCCCEEEEEc----CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 45788888999999998875 589999999986531 12346677898 8899999999
Q ss_pred CC--CceEEEEeecCCcceEEEEEcccccCC---------------------CCCCc---------ceeeee-eeccccc
Q 018697 76 FD--QRIFSTVFSTGESYGAAIWQIPELYGQ---------------------LNSPQ---------LERIAA-LDAHVGK 122 (351)
Q Consensus 76 ~~--~~l~~~~~~~~~d~~i~vw~~~~~~~~---------------------~~~~~---------~~~~~~-~~~h~~~ 122 (351)
++ ..|+++ +.|+.|++|++...... ...+. ..+... ..+|...
T Consensus 104 ~~~~~~l~s~----s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 104 QKNAAQFLLS----TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp CCSSSEEEEE----ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred CCCcceEEEe----CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 98 567765 68999999998731000 00000 001112 3679999
Q ss_pred eeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccc---cccccCcccceeeeEECCCC-CcEEEeecCCeEEEEEcc
Q 018697 123 INCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQ---SKQSSGMLHYLSGGAWDPHD-VNAVAATCESSVQFWDLR 198 (351)
Q Consensus 123 v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~ 198 (351)
|.+++|+|+++. ++++ .|+.|++||+.......... .....+|...|.+++|+|++ ..|++++.|+.|++||++
T Consensus 180 v~~~~~~~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYET-YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSSE-EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eEEEEEcCCCCE-EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 999999999983 4444 79999999998433222211 11234677799999999998 899999999999999999
Q ss_pred cCCc----Cceeecc--------------eeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCc------
Q 018697 199 SMGK----TNSIEHA--------------HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHW------ 254 (351)
Q Consensus 199 ~~~~----~~~~~~~--------------~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~------ 254 (351)
+++. ...+... .|.+++|+|+++ +|++++. +.|++||++...+++..+..|...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~ 335 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCS 335 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCccccceeeccccccccccc
Confidence 8875 4444421 389999999998 7888888 999999998756788888888642
Q ss_pred ---------eeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCC-----cc-cccCCc-------ccccccceeecc
Q 018697 255 ---------TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPS-----ES-LVESPN-------QRANSLLNSYSD 312 (351)
Q Consensus 255 ---------v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~-~~~~~~-------~~~~~~~~~~~~ 312 (351)
+..++|+|++ .+|++++.||.|++||+.......... .. ....+. ............
T Consensus 336 ~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (447)
T 3dw8_B 336 LYENDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLD 414 (447)
T ss_dssp HHHTSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCC
T ss_pred cccccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccc
Confidence 2349999999 999999999999999998742210000 00 000000 000000000113
Q ss_pred ccceEEEEEeCCCCCceEEEeeeCCeEEEeec
Q 018697 313 YEDSVYGLAWSSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 313 ~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
+...|..++|+|++. +||+++.++ +++|.-
T Consensus 415 ~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 415 FNKKILHTAWHPKEN-IIAVATTNN-LYIFQD 444 (447)
T ss_dssp TTSCCCEEEECSSSS-EEEEECSSC-EEEEEC
T ss_pred cCCceeEEEECCCCC-EEEEEecce-eeeecc
Confidence 456789999999998 788887665 778864
No 75
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.7e-35 Score=254.14 Aligned_cols=248 Identities=11% Similarity=0.097 Sum_probs=194.1
Q ss_pred EEEeeecCCcceeeeeeCCCC-CceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee--eccccceeEEEecCCCC
Q 018697 57 ICEGLFSHPNEIWDLSSCPFD-QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL--DAHVGKINCVLWWSSGR 133 (351)
Q Consensus 57 ~~~~~~~h~~~v~~i~~~~~~-~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~ 133 (351)
....+.+|...|.+++|+|++ +.|+++ +.|+.|+|||+. ..+....+ .+|...|.+++|+|++.
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~dg~i~iwd~~---------~~~~~~~~~~~~h~~~v~~~~~~~~~~ 131 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVG----SKGGDIILWDYD---------VQNKTSFIQGMGPGDAITGMKFNQFNT 131 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEE----EBTSCEEEEETT---------STTCEEEECCCSTTCBEEEEEEETTEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEE----cCCCeEEEEeCC---------CcccceeeecCCcCCceeEEEeCCCCC
Confidence 346678999999999999998 666664 789999999998 33333344 47999999999999543
Q ss_pred CcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---
Q 018697 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--- 210 (351)
Q Consensus 134 ~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--- 210 (351)
..+++++.|+.|++||+.. .... ... ....+...+.+++|+|+++.|++++.|+.|++||++ ++.+..+. .|
T Consensus 132 ~~l~s~~~d~~i~iwd~~~-~~~~-~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~-~h~~~ 206 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG-SVIQ-VFA-KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK-LHKAK 206 (383)
T ss_dssp EEEEEEETTTEEEEEETTS-CEEE-EEE-CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEE-CSSSC
T ss_pred CEEEEEeCCCEEEEEECCC-CceE-EEe-ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEec-cCCCc
Confidence 3477778999999999984 2222 111 222345689999999999999999999999999994 55666665 33
Q ss_pred eEEEEcCCCCCcEEEEecCCCeEEEEecccC---CcceeEeeCCCCceeEEEecC-CCCCeEEEeeCCCeEEEEEcCCCC
Q 018697 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRML---KAPIQELPGHTHWTWAVCCNP-EYDGFILSAGTDSTVNLWLVSTSN 286 (351)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~ 286 (351)
|.+++|+|++++++++++.|+.|++||++.. ..++..+ .|...|.+++|+| ++ .+|++++.|+.|++||++.
T Consensus 207 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~iwd~~~-- 282 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNEIRVYSSYD-- 282 (383)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSEEEEEETTB--
T ss_pred EEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCcEEEEECCC--
Confidence 9999999999878999999999999999863 2244444 6999999999999 88 9999999999999999987
Q ss_pred CCCCCCcccccCCcccccccceeeccc-----------------cceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 287 HDELPSESLVESPNQRANSLLNSYSDY-----------------EDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+..+..+..| ...+..++|+|++. + +++.|+.|++||+.+
T Consensus 283 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~-~--s~s~d~~i~iwd~~~ 339 (383)
T 3ei3_B 283 -----------------WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ-L--LLNDKRTIDIYDANS 339 (383)
T ss_dssp -----------------TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT-T--CTTCCCCEEEEETTT
T ss_pred -----------------CccccccccccccccccccceEEeccCCCCceEEEecCCcc-c--ccCCCCeEEEEecCC
Confidence 3333333322 13455577788877 4 788999999999875
No 76
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=262.06 Aligned_cols=257 Identities=13% Similarity=0.201 Sum_probs=197.8
Q ss_pred cCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccC--CCCCCcceeeeeeeccc------------cceeEEEe
Q 018697 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYG--QLNSPQLERIAALDAHV------------GKINCVLW 128 (351)
Q Consensus 63 ~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~~~~h~------------~~v~~~~~ 128 (351)
.|.+.|.+++|+|+++.|+++ +.|+.|+||++..... .......+....+.+|. ..|.+++|
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g----~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATG----DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEE----ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred cccCcEEEEEECCCCCEEEEE----cCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 467999999999999988885 6899999999983211 00112234677888998 88999999
Q ss_pred cCCCC-CcEEEEecCCcEEEEEcCCCCCCcc-------------------c----------------ccccccCccccee
Q 018697 129 WSSGR-HDKLVSIDEENIFLWSLDCSNKNAQ-------------------V----------------QSKQSSGMLHYLS 172 (351)
Q Consensus 129 ~~~~~-~~~~~~~~d~~v~iwd~~~~~~~~~-------------------~----------------~~~~~~~~~~~v~ 172 (351)
+|++. ..+++++.|+.|++||+.+...... + ......+|...|.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 99983 2477778999999999875221100 0 0011246788999
Q ss_pred eeEECCCCCcEEEeecCCeEEEEEcccC-CcCcee------ecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCC
Q 018697 173 GGAWDPHDVNAVAATCESSVQFWDLRSM-GKTNSI------EHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242 (351)
Q Consensus 173 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~------~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 242 (351)
+++|+|+++.|+++ .|+.|++||+++. +....+ ...| |.+++|+|++..+|++|+.||.|++||++. .
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~ 259 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA-S 259 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT-C
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC-C
Confidence 99999999999998 7999999999843 333321 1133 999999999833899999999999999997 4
Q ss_pred cc----eeEeeCCCC------------ceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccccc
Q 018697 243 AP----IQELPGHTH------------WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL 306 (351)
Q Consensus 243 ~~----~~~~~~~~~------------~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (351)
+. +..+..|.. .|.+++|+|++ .+|++++. +.|++||++. .+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~------------------~~~~ 319 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNM------------------ENRP 319 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETTC------------------CSSC
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCCC------------------Cccc
Confidence 44 678888876 89999999999 99999998 9999999985 1556
Q ss_pred ceeeccccce---------------EEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 307 LNSYSDYEDS---------------VYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 307 ~~~~~~~~~~---------------v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+..+..|... +..++|+|+++ +|++++.||.|++||+.+
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTT
T ss_pred cceeeccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCC
Confidence 6677666532 23499999999 889999999999999875
No 77
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-35 Score=277.31 Aligned_cols=256 Identities=18% Similarity=0.287 Sum_probs=205.8
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDK 136 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~ 136 (351)
..+.+|.+.|++++|+|+++.|+++ +.|+.|+||++. ....+.+..+.+|.++|.+++|+|+ +. .+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg----~~dg~I~vwd~~-------~~~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l 70 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATC----SSDKTIKIFEVE-------GETHKLIDTLTGHEGPVWRVDWAHPKFGT-IL 70 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEE----ETTTEEEEEEEE-------TTEEEEEEEECCCSSCEEEEEECCTTSCS-EE
T ss_pred eecccCcceeEEEEECCCCCeEEEE----ECCCcEEEEecC-------CCCCccceeccCCcCceEEEEecCCCCCC-EE
Confidence 3457899999999999999988885 689999999987 2356778889999999999999988 66 47
Q ss_pred EEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCC--CCcEEEeecCCeEEEEEcccCCcCceee-cce---
Q 018697 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKTNSIE-HAH--- 210 (351)
Q Consensus 137 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~--- 210 (351)
++++.||.|++||+.++... ......+|...|.+++|+|+ ++.+++++.||.|++||++++....... ..|
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~~---~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRWS---QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp EEEETTSCEEEEEEETTEEE---EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred EEEeCCCeEEEEECCCCccc---ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc
Confidence 77789999999999864311 11223456779999999999 8999999999999999999874433222 233
Q ss_pred eEEEEcCCC-------------CCcEEEEecCCCeEEEEecccCC---cceeEeeCCCCceeEEEecCC---CCCeEEEe
Q 018697 211 VRNVDYDTK-------------KKHLLVTAADESGIHLWDLRMLK---APIQELPGHTHWTWAVCCNPE---YDGFILSA 271 (351)
Q Consensus 211 v~~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~---~~~~l~s~ 271 (351)
+.+++|+|. +. ++++|+.||.|++||++... .+...+.+|..+|++++|+|+ + .+|+++
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~-~~l~s~ 225 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-SYLASV 225 (753)
T ss_dssp EEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS-EEEEEE
T ss_pred eEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCC-CEEEEE
Confidence 999999994 66 79999999999999998743 355677899999999999999 7 999999
Q ss_pred eCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 272 GTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 272 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+.||.|++||++...... ...+.....|...|++++|+|+++ ++++++.||.|++|++..
T Consensus 226 s~Dg~I~iwd~~~~~~~~--------------~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 226 SQDRTCIIWTQDNEQGPW--------------KKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp ESSSCEEEEEESSSSSCC--------------BCCBSSSSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCCS
T ss_pred ecCCEEEEecCCCCCCcc--------------eeEEeccCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecCC
Confidence 999999999998721100 113344456888999999999998 899999999999999874
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.6e-35 Score=277.52 Aligned_cols=247 Identities=15% Similarity=0.241 Sum_probs=213.5
Q ss_pred EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEE
Q 018697 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 58 ~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 137 (351)
...+.+|.+.|.+++|+|+++.|+++ +.|+.|+|||+. +++.+..+..|..+|.+++|+|+++. ++
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~----~~~g~v~iwd~~---------~~~~~~~~~~~~~~v~~~~~s~~~~~-l~ 71 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTT----LYSGRVEIWNYE---------TQVEVRSIQVTETPVRAGKFIARKNW-II 71 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEE----ETTSEEEEEETT---------TTEEEEEEECCSSCEEEEEEEGGGTE-EE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEE----eCCCEEEEEECC---------CCceEEEEecCCCcEEEEEEeCCCCE-EE
Confidence 35677899999999999999998886 689999999998 67888899999999999999999984 66
Q ss_pred EEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCC-cCceeecce---eEE
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG-KTNSIEHAH---VRN 213 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~---v~~ 213 (351)
+++.|+.|++||+.++...... .+|...|.+++|+|+++.|++++.|+.|++||++++. ....+. .| +.+
T Consensus 72 ~~~~dg~i~vw~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~ 145 (814)
T 3mkq_A 72 VGSDDFRIRVFNYNTGEKVVDF-----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMC 145 (814)
T ss_dssp EEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-CCSSCEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEE-----ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-CCCCcEEE
Confidence 6788999999999876443322 3466799999999999999999999999999999874 333443 44 999
Q ss_pred EEcCC-CCCcEEEEecCCCeEEEEecccCCcceeEeeCCC-CceeEEEecC--CCCCeEEEeeCCCeEEEEEcCCCCCCC
Q 018697 214 VDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT-HWTWAVCCNP--EYDGFILSAGTDSTVNLWLVSTSNHDE 289 (351)
Q Consensus 214 ~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~ 289 (351)
++|+| ++. ++++++.||.|++||++. ..+...+..+. ..+..++|+| ++ .+|++++.|+.|++||++.
T Consensus 146 ~~~~p~~~~-~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~----- 217 (814)
T 3mkq_A 146 VAFNPKDPS-TFASGCLDRTVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQT----- 217 (814)
T ss_dssp EEEETTEEE-EEEEEETTSEEEEEETTC-SSCSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTSEEEEEETTT-----
T ss_pred EEEEcCCCC-EEEEEeCCCeEEEEECCC-CcceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCC-----
Confidence 99999 665 899999999999999987 44556665544 8999999999 88 8999999999999999998
Q ss_pred CCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 290 LPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++.+..+.+|...|.+++|+|+++ ++++++.||.|++||+.+.
T Consensus 218 --------------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 218 --------------KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp --------------TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTC
T ss_pred --------------CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC
Confidence 788888999999999999999999 8999999999999998753
No 79
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-34 Score=248.36 Aligned_cols=251 Identities=13% Similarity=0.084 Sum_probs=202.5
Q ss_pred eecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCC-CcEEEE
Q 018697 61 LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGR-HDKLVS 139 (351)
Q Consensus 61 ~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~ 139 (351)
..+|.+.|.+++|+|+++.|+++ +.|+.|++|++... ........+..|...|.+++|+|++. . ++++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~----~~d~~v~iw~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~ 75 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLIT----SWDGSLTVYKFDIQ------AKNVDLLQSLRYKHPLLCCNFIDNTDLQ-IYVG 75 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEE----ETTSEEEEEEEETT------TTEEEEEEEEECSSCEEEEEEEESSSEE-EEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEE----cCCCeEEEEEeCCC------CccccceeeeecCCceEEEEECCCCCcE-EEEE
Confidence 34799999999999999888885 68999999999831 01123455568999999999999987 5 7777
Q ss_pred ecCCcEEEEEc-CCCCCCcccccccccC--cccceeeeEECCCCCcEEEeecCCeEEEEEccc---------CCcCceee
Q 018697 140 IDEENIFLWSL-DCSNKNAQVQSKQSSG--MLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS---------MGKTNSIE 207 (351)
Q Consensus 140 ~~d~~v~iwd~-~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---------~~~~~~~~ 207 (351)
+.|+.|++||+ .++.. ....+ |...|.+++|+| ++.+++++.|+.|++||+++ ++++..+.
T Consensus 76 ~~dg~i~~wd~~~~~~~------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF------QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp ETTSCEEEECSSSSSSE------EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred cCCCeEEEEEeccCCce------EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence 88999999999 75422 12234 677999999999 99999999999999999998 77777766
Q ss_pred cce-eEEEEcCCCCCcEEEEecCCCeEEEEeccc-CCcce-eEeeCCCCceeEEEecC-CCCCeEEEeeCCCeEEEEEcC
Q 018697 208 HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRM-LKAPI-QELPGHTHWTWAVCCNP-EYDGFILSAGTDSTVNLWLVS 283 (351)
Q Consensus 208 ~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~-~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~ 283 (351)
... +.+++|+|++ +++++.|+.|++||++. ..... .....|...+.+++|+| ++ .++++++.||.|++|+++
T Consensus 149 ~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECC
T ss_pred eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC-CEEEEEecCCcEEEEEEc
Confidence 444 9999999876 88899999999999986 44333 34446888999999999 99 999999999999999998
Q ss_pred CCCCCCCCCcccccCCcccccccceeeccccc---------eEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 284 TSNHDELPSESLVESPNQRANSLLNSYSDYED---------SVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
...... ..+....+..|.. .|.+++|+|+++ +|++++.||.|++||+.+.
T Consensus 225 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 225 DQGDDY-------------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp TTCCST-------------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTTT
T ss_pred CCCccc-------------ccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCccH
Confidence 720000 0256666766654 899999999998 8999999999999999753
No 80
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.5e-34 Score=253.40 Aligned_cols=277 Identities=15% Similarity=0.276 Sum_probs=219.2
Q ss_pred eeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEc
Q 018697 19 ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (351)
+..+.+ +...++.|+ .++.|++|++.... ....+.+|.+.|.+++| +++.|+++ +.|+.|++||+
T Consensus 136 v~~~~~--d~~~l~~g~----~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~--~~~~l~sg----~~dg~i~vwd~ 200 (435)
T 1p22_A 136 VYCLQY--DDQKIVSGL----RDNTIKIWDKNTLE---CKRILTGHTGSVLCLQY--DERVIITG----SSDSTVRVWDV 200 (435)
T ss_dssp EEEEEC--CSSEEEEEE----SSSCEEEEESSSCC---EEEEECCCSSCEEEEEC--CSSEEEEE----ETTSCEEEEES
T ss_pred EEEEEE--CCCEEEEEe----CCCeEEEEeCCCCe---EEEEEcCCCCcEEEEEE--CCCEEEEE----cCCCeEEEEEC
Confidence 444444 556677664 57899999986543 34567789999999999 56677664 79999999999
Q ss_pred ccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECC
Q 018697 99 PELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP 178 (351)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 178 (351)
. +.+.+..+..|...|.+++|+++ .+++++.|+.|++||+.++..... .....+|...|.+++|
T Consensus 201 ~---------~~~~~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~-- 264 (435)
T 1p22_A 201 N---------TGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITL--RRVLVGHRAAVNVVDF-- 264 (435)
T ss_dssp S---------SCCEEEEECCCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEE--EEEECCCSSCEEEEEE--
T ss_pred C---------CCcEEEEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCcee--eeEecCCCCcEEEEEe--
Confidence 8 66788899999999999999753 477779999999999986543321 1223467779999999
Q ss_pred CCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCce
Q 018697 179 HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWT 255 (351)
Q Consensus 179 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 255 (351)
+++.+++++.|+.|++||+++++.+..+. .| +.+++++ +. ++++|+.||.|++||+++ ++++..+.+|...|
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~v 339 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIEC-GACLRVLEGHEELV 339 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCC-CCEEEEEeCCcCcE
Confidence 67899999999999999999998888777 44 8899984 44 899999999999999998 67889999999999
Q ss_pred eEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeee
Q 018697 256 WAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY 335 (351)
Q Consensus 256 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 335 (351)
.+++| ++ .+|++|+.||.|++||++........ ....++..+.+|...|.+++| ++. +|++++.
T Consensus 340 ~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~----------~~~~~~~~~~~h~~~v~~l~~--~~~-~l~s~s~ 403 (435)
T 1p22_A 340 RCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRAP----------AGTLCLRTLVEHSGRVFRLQF--DEF-QIVSSSH 403 (435)
T ss_dssp EEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTSC----------TTTTEEEEECCCSSCCCCEEE--CSS-CEEECCS
T ss_pred EEEEe--cC-CEEEEEeCCCcEEEEECCCCCCcccc----------ccchheeeccCCCCCeEEEEe--CCC-EEEEEeC
Confidence 99999 55 89999999999999999762110000 001267788899999999999 566 7999999
Q ss_pred CCeEEEeecCcc
Q 018697 336 DGRVVVESVKPF 347 (351)
Q Consensus 336 dg~v~vw~~~~~ 347 (351)
||.|++||+...
T Consensus 404 Dg~i~iwd~~~~ 415 (435)
T 1p22_A 404 DDTILIWDFLND 415 (435)
T ss_dssp SSEEEEEC----
T ss_pred CCEEEEEECCCC
Confidence 999999999754
No 81
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.6e-34 Score=239.68 Aligned_cols=250 Identities=16% Similarity=0.299 Sum_probs=195.8
Q ss_pred ccceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCC--CCceEEEEeecCCc
Q 018697 13 KYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF--DQRIFSTVFSTGES 90 (351)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~--~~~l~~~~~~~~~d 90 (351)
..+...|..+.+++++.+++.|. .++.|++|++....... ...+.+|.+.|.+++|+|+ ++.|+++ +.|
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s----~D~~v~iw~~~~~~~~~-~~~l~gH~~~V~~v~~s~~~~g~~l~s~----s~D 76 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCS----SDKTIKIFEVEGETHKL-IDTLTGHEGPVWRVDWAHPKFGTILASC----SYD 76 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEE----TTSCEEEEEBCSSCBCC-CEEECCCSSCEEEEEECCGGGCSEEEEE----ETT
T ss_pred cCCcCceEEEEECCCCCEEEEEe----CCCEEEEEecCCCCcEE-EEEEccccCCeEEEEecCCCcCCEEEEE----cCC
Confidence 33455677888899999998875 68999999997543322 3567899999999999864 6666664 799
Q ss_pred ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcc
Q 018697 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (351)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 168 (351)
++|+|||+.. .....+..+..|...|.+++|+|+ +. ++++++.|+.|++||+.+...... ....+|.
T Consensus 77 ~~v~iWd~~~-------~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~---~~~~~h~ 145 (297)
T 2pm7_B 77 GKVMIWKEEN-------GRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSP---IIIDAHA 145 (297)
T ss_dssp TEEEEEEBSS-------SCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCC---EEEECCS
T ss_pred CEEEEEEcCC-------CceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceee---eeeeccc
Confidence 9999999972 123456677889999999999997 55 466778999999999986432211 1234677
Q ss_pred cceeeeEECCC-------------CCcEEEeecCCeEEEEEcccCCc----Cceeecce---eEEEEcCCCC--CcEEEE
Q 018697 169 HYLSGGAWDPH-------------DVNAVAATCESSVQFWDLRSMGK----TNSIEHAH---VRNVDYDTKK--KHLLVT 226 (351)
Q Consensus 169 ~~v~~~~~~~~-------------~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~---v~~~~~~~~~--~~~l~~ 226 (351)
..|.+++|+|+ ++.|++++.|+.|++||+++++. ...+. +| |.+++|+|++ ..+|++
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEE
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEEE
Confidence 79999999997 46899999999999999987662 33343 45 9999999995 348999
Q ss_pred ecCCCeEEEEecccCCcc--eeEe--eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 227 AADESGIHLWDLRMLKAP--IQEL--PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~--~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
++.|++|++||++..... ...+ ..|...|.+++|+|++ .+|++++.|+.|++|+...
T Consensus 225 ~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEEEEEECT
T ss_pred EECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCC-CEEEEEcCCCcEEEEEECC
Confidence 999999999999863221 1233 4678899999999999 9999999999999999875
No 82
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-34 Score=241.27 Aligned_cols=248 Identities=15% Similarity=0.166 Sum_probs=206.5
Q ss_pred CCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC
Q 018697 52 GGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS 131 (351)
Q Consensus 52 ~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 131 (351)
.........+.+|.+.|.+++| |+++.|+++ +.|+.|++||+. ..+....+..|...|.+++|+|+
T Consensus 5 ~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~----~~dg~v~vw~~~---------~~~~~~~~~~~~~~v~~~~~~~~ 70 (313)
T 3odt_A 5 FTGYQLSATLKGHDQDVRDVVA-VDDSKVASV----SRDGTVRLWSKD---------DQWLGTVVYTGQGFLNSVCYDSE 70 (313)
T ss_dssp CCCCEEEEEECCCSSCEEEEEE-EETTEEEEE----ETTSEEEEEEES---------SSEEEEEEEECSSCEEEEEEETT
T ss_pred cccHHHHHHhhCCCCCcEEEEe-cCCCEEEEE----EcCCcEEEEECC---------CCEEEEEeecCCccEEEEEECCC
Confidence 3344456778899999999999 989888875 699999999998 56777888899999999999999
Q ss_pred CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce-
Q 018697 132 GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH- 210 (351)
Q Consensus 132 ~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~- 210 (351)
+.. +++++.|+.|++|++......... ....+|...+.+++| +++.+++++.|+.|++|| .++....+....
T Consensus 71 ~~~-l~~~~~dg~i~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~ 143 (313)
T 3odt_A 71 KEL-LLFGGKDTMINGVPLFATSGEDPL--YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA 143 (313)
T ss_dssp TTE-EEEEETTSCEEEEETTCCTTSCC---CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS
T ss_pred CCE-EEEecCCCeEEEEEeeecCCCCcc--cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC
Confidence 984 677788999999999864332222 223467779999999 567899999999999999 444444554222
Q ss_pred -eEEEEcCC-CCCcEEEEecCCCeEEEEecccCCcceeEeeC-CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCC
Q 018697 211 -VRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNH 287 (351)
Q Consensus 211 -v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 287 (351)
+.+++|+| ++. ++++++.|+.|++||. .+....+.. |...+.+++|+|++ . +++++.|+.|++||++.
T Consensus 144 ~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~---~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~dg~i~i~d~~~--- 214 (313)
T 3odt_A 144 SVWDAKVVSFSEN-KFLTASADKTIKLWQN---DKVIKTFSGIHNDVVRHLAVVDDG-H-FISCSNDGLIKLVDMHT--- 214 (313)
T ss_dssp CEEEEEEEETTTT-EEEEEETTSCEEEEET---TEEEEEECSSCSSCEEEEEEEETT-E-EEEEETTSEEEEEETTT---
T ss_pred ceeEEEEccCCCC-EEEEEECCCCEEEEec---CceEEEEeccCcccEEEEEEcCCC-e-EEEccCCCeEEEEECCc---
Confidence 99999988 666 8999999999999994 446677776 89999999999998 5 99999999999999998
Q ss_pred CCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 288 DELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++++..+..|...|++++|+|++. +++++.||.|++||+.+.
T Consensus 215 ----------------~~~~~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 215 ----------------GDVLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp ----------------CCEEEEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTC
T ss_pred ----------------hhhhhhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCC
Confidence 888999999999999999999984 889999999999998754
No 83
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=261.17 Aligned_cols=283 Identities=14% Similarity=0.146 Sum_probs=202.0
Q ss_pred CCCCCeEEEEeeecCCcceeeeeeCC-CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEe
Q 018697 50 SSGGTELICEGLFSHPNEIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLW 128 (351)
Q Consensus 50 ~~~~~~~~~~~~~~h~~~v~~i~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 128 (351)
|...+.+......+|.+.|++++|+| +++.|+++ +.|++|+|||+....... ..+....+ .|...|.+++|
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~----s~dg~v~vwd~~~~~~~~---~~~~~~~~-~h~~~v~~~~~ 119 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITG----SDQGVIKIWNLKEIIVGE---VYSSSLTY-DCSSTVTQITM 119 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEE----ETTSEEEEEEHHHHHTTC---CCSCSEEE-ECSSCEEEEEE
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEe----cCCceEEEeECcccccCc---ccceeeec-cCCCCEEEEEE
Confidence 34444444333378999999999999 88888875 799999999987311100 02223333 59999999999
Q ss_pred cCCCCCcEEEEecCCcEEEEEcC---CCCCCccccccc--------ccCcccceeeeE--ECCCCCcEEEeecCCeEEEE
Q 018697 129 WSSGRHDKLVSIDEENIFLWSLD---CSNKNAQVQSKQ--------SSGMLHYLSGGA--WDPHDVNAVAATCESSVQFW 195 (351)
Q Consensus 129 ~~~~~~~~~~~~~d~~v~iwd~~---~~~~~~~~~~~~--------~~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~iw 195 (351)
+|++.. +++++.|+.|++||+. .+... ...... ..++...+.++. +++++..+++++.|+.|++|
T Consensus 120 ~~~~~~-l~s~s~dg~i~vwd~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 197 (437)
T 3gre_A 120 IPNFDA-FAVSSKDGQIIVLKVNHYQQESEV-KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIF 197 (437)
T ss_dssp CTTSSE-EEEEETTSEEEEEEEEEEEETTEE-EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred eCCCCE-EEEEeCCCEEEEEEeccccCCcee-eccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 998884 6777899999999995 22211 111100 000333566666 66889999999999999999
Q ss_pred EcccCCcCceeecc-e---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee-CCCCceeEEEec----CCCCC
Q 018697 196 DLRSMGKTNSIEHA-H---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCN----PEYDG 266 (351)
Q Consensus 196 d~~~~~~~~~~~~~-~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~----~~~~~ 266 (351)
|+++++.+..+... | |.+++|+|++. +|++|+.||.|++||++. .+++..+. .|..+|.+++|+ |++ .
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~-~ 274 (437)
T 3gre_A 198 DIRTLERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNS-V 274 (437)
T ss_dssp ETTTCCEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTE-E
T ss_pred eCCCCeeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCc-c
Confidence 99999988888742 3 99999999998 899999999999999997 77788776 788899999555 556 7
Q ss_pred eEEEeeCCCeEEEEEcCCCCCCCCCC------cccccCCcccccccceeecc--ccceEEEEEeCCCCCceEEEeeeCCe
Q 018697 267 FILSAGTDSTVNLWLVSTSNHDELPS------ESLVESPNQRANSLLNSYSD--YEDSVYGLAWSSREPWIFASLSYDGR 338 (351)
Q Consensus 267 ~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~ 338 (351)
+|++++.|+.|++||++......... ......+... ...-..+.+ |...|++++|+ +++ +|++++.|+.
T Consensus 275 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~ 351 (437)
T 3gre_A 275 IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEK-GLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSS 351 (437)
T ss_dssp EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCS-SGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTE
T ss_pred EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccc-ccccceecccccCCceEEEEEC-Cce-EEEecCCCCe
Confidence 99999999999999998732111000 0000000000 000012233 77889999999 666 8999999999
Q ss_pred EEEeecCccc
Q 018697 339 VVVESVKPFL 348 (351)
Q Consensus 339 v~vw~~~~~~ 348 (351)
|++||+.+..
T Consensus 352 i~~wd~~~~~ 361 (437)
T 3gre_A 352 IVMFSLNELS 361 (437)
T ss_dssp EEEEETTCGG
T ss_pred EEEEECCCcc
Confidence 9999997643
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-34 Score=253.26 Aligned_cols=247 Identities=17% Similarity=0.265 Sum_probs=201.3
Q ss_pred EEEeeecCCcceeeeeeCCCCC-ceEEEEeecCCcceEEEEEc----ccccCCCCCCcce------eeeeeec-------
Q 018697 57 ICEGLFSHPNEIWDLSSCPFDQ-RIFSTVFSTGESYGAAIWQI----PELYGQLNSPQLE------RIAALDA------- 118 (351)
Q Consensus 57 ~~~~~~~h~~~v~~i~~~~~~~-~l~~~~~~~~~d~~i~vw~~----~~~~~~~~~~~~~------~~~~~~~------- 118 (351)
.......|.+.|.+++|+|+++ .|+++ +.|+.|++|++ . ..+ ....+..
T Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~l~~~----~~dg~i~iw~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 103 (425)
T 1r5m_A 37 KILKEIVKLDNIVSSTWNPLDESILAYG----EKNSVARLARIVETDQ---------EGKKYWKLTIIAELRHPFALSAS 103 (425)
T ss_dssp EECEEEEECSCCSEEEECSSCTTEEEEE----ETBTEEEEEEEEEC---------------CEEEEEEEEEECCCCCC--
T ss_pred hheeeeeccCceEEEEECCCCCcEEEEe----cCCceEEEEEEecccC---------Ccccccccccccccccccccccc
Confidence 3344456779999999999999 66664 68999999999 5 223 3333333
Q ss_pred ---cccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEE
Q 018697 119 ---HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFW 195 (351)
Q Consensus 119 ---h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 195 (351)
|...|.+++|+|++.. +++++.|+.|++||.. +... . ....|...|.+++|+|++++|++++.|+.|++|
T Consensus 104 ~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~i~~~~-~~~~-~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 176 (425)
T 1r5m_A 104 SGKTTNQVTCLAWSHDGNS-IVTGVENGELRLWNKT-GALL-N----VLNFHRAPIVSVKWNKDGTHIISMDVENVTILW 176 (425)
T ss_dssp ----CBCEEEEEECTTSSE-EEEEETTSCEEEEETT-SCEE-E----EECCCCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred ccCCCCceEEEEEcCCCCE-EEEEeCCCeEEEEeCC-CCee-e----eccCCCccEEEEEECCCCCEEEEEecCCeEEEE
Confidence 6889999999999984 6677889999999943 2222 1 223567799999999999999999999999999
Q ss_pred EcccCCcCceee-------------------------------------------------------cce---eEEEEcC
Q 018697 196 DLRSMGKTNSIE-------------------------------------------------------HAH---VRNVDYD 217 (351)
Q Consensus 196 d~~~~~~~~~~~-------------------------------------------------------~~~---v~~~~~~ 217 (351)
|+++++....+. ..| +.+++|+
T Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 177 NVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp ETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE
T ss_pred ECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC
Confidence 997654322110 122 8999999
Q ss_pred CCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCccccc
Q 018697 218 TKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297 (351)
Q Consensus 218 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 297 (351)
|+++ +|++++.|+.|++||++. .+++..+..|...|.+++|+|++ ++++++.|+.|++||++.
T Consensus 257 ~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~------------- 319 (425)
T 1r5m_A 257 DTNK-LLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ------------- 319 (425)
T ss_dssp TTTT-EEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT-------------
T ss_pred CCCC-EEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC-------------
Confidence 9998 899999999999999997 66788888999999999999987 899999999999999998
Q ss_pred CCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++.+..+..|...|.+++|+|+++ +|++++.||.|++|++...
T Consensus 320 ------~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 320 ------NTLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp ------TEEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHH
T ss_pred ------CcEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCC
Confidence 888888989999999999999998 8999999999999998754
No 85
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.3e-34 Score=253.82 Aligned_cols=266 Identities=16% Similarity=0.262 Sum_probs=216.2
Q ss_pred ceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCC
Q 018697 29 TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSP 108 (351)
Q Consensus 29 ~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 108 (351)
..++.| ..++.|++|++.... ....+.+|.+.|.+++|+|++ .++++ +.|++|++||+.
T Consensus 133 ~~l~sg----s~dg~i~vwd~~~~~---~~~~~~~h~~~V~~l~~~~~~-~l~s~----s~dg~i~vwd~~--------- 191 (464)
T 3v7d_B 133 NYVITG----ADDKMIRVYDSINKK---FLLQLSGHDGGVWALKYAHGG-ILVSG----STDRTVRVWDIK--------- 191 (464)
T ss_dssp TEEEEE----ETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECSTT-EEEEE----ETTSCEEEEETT---------
T ss_pred CEEEEE----cCCCcEEEEECCCCc---EEEEEeCCCcCEEEEEEcCCC-EEEEE----eCCCCEEEEECC---------
Confidence 455555 368999999986642 345677999999999999987 56554 799999999998
Q ss_pred cceeeeeeeccccceeEEEecC--CCCCcEEEEecCCcEEEEEcCCCCCCccc------------------ccccccCcc
Q 018697 109 QLERIAALDAHVGKINCVLWWS--SGRHDKLVSIDEENIFLWSLDCSNKNAQV------------------QSKQSSGML 168 (351)
Q Consensus 109 ~~~~~~~~~~h~~~v~~~~~~~--~~~~~~~~~~~d~~v~iwd~~~~~~~~~~------------------~~~~~~~~~ 168 (351)
+.+.+..+.+|...|.+++|++ ++. .+++++.|+.|++||+.+....... ......+|.
T Consensus 192 ~~~~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 192 KGCCTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred CCcEEEEECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 6788889999999999999985 445 4677789999999999875433211 111234566
Q ss_pred cceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcce
Q 018697 169 HYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI 245 (351)
Q Consensus 169 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 245 (351)
..+.++ +++++.+++++.|+.|++||+++++.+..+. +| +.+++|+|+++ ++++|+.|+.|++||+++ ++++
T Consensus 271 ~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~-~~~~ 345 (464)
T 3v7d_B 271 ASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERK-RCISASMDTTIRIWDLEN-GELM 345 (464)
T ss_dssp SCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTT-TEEE
T ss_pred ceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CcEE
Confidence 667666 5678999999999999999999988877776 34 99999999998 899999999999999997 7789
Q ss_pred eEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCC
Q 018697 246 QELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR 325 (351)
Q Consensus 246 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 325 (351)
..+.+|...|.+++|++ .+|++++.||.|++||++. ....... .|...+..++|+|+
T Consensus 346 ~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~-------------------~~~~~~~-~~~~~~~~~~~~~~ 402 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDAND-------------------YSRKFSY-HHTNLSAITTFYVS 402 (464)
T ss_dssp EEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTT-------------------CCEEEEE-ECTTCCCEEEEEEC
T ss_pred EEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCC-------------------Cceeeee-cCCCCccEEEEEeC
Confidence 99999999999999983 7999999999999999987 5544444 35566788899999
Q ss_pred CCceEEEeeeCCeEEEeecCc
Q 018697 326 EPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 326 ~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+. ++++++ ||.|++||+++
T Consensus 403 ~~-~l~~~~-dg~i~iwd~~~ 421 (464)
T 3v7d_B 403 DN-ILVSGS-ENQFNIYNLRS 421 (464)
T ss_dssp SS-EEEEEE-TTEEEEEETTT
T ss_pred CC-EEEEec-CCeEEEEECCC
Confidence 98 788887 99999999875
No 86
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.6e-34 Score=244.52 Aligned_cols=281 Identities=14% Similarity=0.169 Sum_probs=219.5
Q ss_pred ceeEeeeecCCCCc---ceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcc
Q 018697 15 QARCISDVKADTDH---TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESY 91 (351)
Q Consensus 15 ~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~ 91 (351)
+...|..+.++++. ..++.|. .++.|++|++...+. .....+.+|...|.+++|+|+++.|+++ +.|+
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~----~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~----~~dg 108 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGS----WANDVRCWEVQDSGQ-TIPKAQQMHTGPVLDVCWSDDGSKVFTA----SCDK 108 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEE----TTSEEEEEEECTTSC-EEEEEEEECSSCEEEEEECTTSSEEEEE----ETTS
T ss_pred CCCceEEEEEcCCCCCceEEEEEC----CCCcEEEEEcCCCCc-eeEEEeccccCCEEEEEECcCCCEEEEE----cCCC
Confidence 44567788888884 7777764 579999999987443 3336677899999999999999988885 6899
Q ss_pred eEEEEEcccccCCCCCCcceeeeeeeccccceeEEEe--cCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccc
Q 018697 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLW--WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
.|++||+. ..+.+. +..|...|.+++| +|++.. +++++.|+.|++||+.++.....+... .
T Consensus 109 ~v~iwd~~---------~~~~~~-~~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~------~ 171 (368)
T 3mmy_A 109 TAKMWDLS---------SNQAIQ-IAQHDAPVKTIHWIKAPNYSC-VMTGSWDKTLKFWDTRSSNPMMVLQLP------E 171 (368)
T ss_dssp EEEEEETT---------TTEEEE-EEECSSCEEEEEEEECSSCEE-EEEEETTSEEEEECSSCSSCSEEEECS------S
T ss_pred cEEEEEcC---------CCCcee-eccccCceEEEEEEeCCCCCE-EEEccCCCcEEEEECCCCcEEEEEecC------C
Confidence 99999998 444444 5679999999999 888873 667788999999999976544433321 2
Q ss_pred ceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee---cce-eEEEEcCCCCC---cEEEEecCCCeEEEEecccCC
Q 018697 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE---HAH-VRNVDYDTKKK---HLLVTAADESGIHLWDLRMLK 242 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~-v~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~ 242 (351)
.+.++.+.+ ..+++++.++.+++||++......... ..+ ..++++.++.. ..+++++.|+.|++||++...
T Consensus 172 ~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 172 RCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp CEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred CceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 566666654 578889999999999998764332222 112 55555544433 238999999999999998732
Q ss_pred --cceeEeeCCCC------------ceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccce
Q 018697 243 --APIQELPGHTH------------WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLN 308 (351)
Q Consensus 243 --~~~~~~~~~~~------------~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (351)
..+..+..|.. +|++++|+|++ .+|++++.||.|++||++. ++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~-------------------~~~~~ 309 (368)
T 3mmy_A 250 PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDA-------------------RTKLK 309 (368)
T ss_dssp HHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTT-------------------TEEEE
T ss_pred ccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCC-------------------CcEEE
Confidence 45677777776 79999999999 9999999999999999998 88899
Q ss_pred eeccccceEEEEEeCCCCCceEEEeeeCCeEEEeec
Q 018697 309 SYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 309 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
.+..|...|++++|+|+++ +|++++.|+..+.|++
T Consensus 310 ~~~~~~~~v~~~~~s~~g~-~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 310 TSEQLDQPISACCFNHNGN-IFAYASSYDWSKGHEF 344 (368)
T ss_dssp ECCCCSSCEEEEEECTTSS-CEEEEECCCSTTCGGG
T ss_pred EecCCCCCceEEEECCCCC-eEEEEecccccccccc
Confidence 9999999999999999999 8999998876655554
No 87
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.7e-34 Score=242.39 Aligned_cols=250 Identities=18% Similarity=0.315 Sum_probs=194.4
Q ss_pred cceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCC--CCceEEEEeecCCcc
Q 018697 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF--DQRIFSTVFSTGESY 91 (351)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~--~~~l~~~~~~~~~d~ 91 (351)
.+...|..+.+++++..++.|+ .++.|++|++.... ......+.+|.+.|.+++|+|. +..|+++ +.|+
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs----~D~~v~lwd~~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~----s~D~ 81 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCS----SDRSVKIFDVRNGG-QILIADLRGHEGPVWQVAWAHPMYGNILASC----SYDR 81 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEE----TTTEEEEEEEETTE-EEEEEEEECCSSCEEEEEECCGGGSSCEEEE----ETTS
T ss_pred cccCeEEEeeEcCCCCEEEEEe----CCCeEEEEEecCCC-cEEEEEEcCCCccEEEEEeCCCCCCCEEEEE----ECCC
Confidence 3456678888899998888875 68999999997642 2334667899999999999863 6777774 7999
Q ss_pred eEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccc
Q 018697 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
+|++||+.. ........+.+|...|.+++|+|+ +. ++++++.|+.|++||+....... ......+|..
T Consensus 82 ~v~iWd~~~-------~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~--~~~~~~~h~~ 151 (316)
T 3bg1_A 82 KVIIWREEN-------GTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWE--VKKINNAHTI 151 (316)
T ss_dssp CEEEECCSS-------SCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEE--ECCBTTSSSS
T ss_pred EEEEEECCC-------CcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcc--eeeeeccccC
Confidence 999999872 123456678899999999999998 44 46677899999999998643211 1122346777
Q ss_pred ceeeeEECCC-----------------CCcEEEeecCCeEEEEEcccCC---cCceeecce---eEEEEcCCCC---CcE
Q 018697 170 YLSGGAWDPH-----------------DVNAVAATCESSVQFWDLRSMG---KTNSIEHAH---VRNVDYDTKK---KHL 223 (351)
Q Consensus 170 ~v~~~~~~~~-----------------~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~---v~~~~~~~~~---~~~ 223 (351)
.+.+++|+|+ +++|++++.|+.|++||++... ....+. +| |.+++|+|++ ..+
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSCCE
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCCce
Confidence 8999999997 3689999999999999997542 333343 45 9999999986 138
Q ss_pred EEEecCCCeEEEEecccCC---cceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 224 LVTAADESGIHLWDLRMLK---APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 224 l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
|++++.|++|++||++... .....+..|...|.+++|+|++ .+|++++.|+.|++|+...
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEECT
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEECC
Confidence 9999999999999987521 1234556789999999999999 9999999999999999874
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-33 Score=280.48 Aligned_cols=282 Identities=17% Similarity=0.259 Sum_probs=237.4
Q ss_pred eeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEE
Q 018697 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAI 95 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~v 95 (351)
...+..+.+++++..++.|+ .++.|.+|++.... ....+.+|.+.|.+++|+|+++.|+++ +.|+.|++
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~----~d~~i~vw~~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~----~~d~~v~v 683 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCG----ADKTLQVFKAETGE---KLLDIKAHEDEVLCCAFSSDDSYIATC----SADKKVKI 683 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEEE
T ss_pred cccEEEEEECCCCCEEEEEe----CCCeEEEEECCCCC---EEEEeccCCCCEEEEEEecCCCEEEEE----eCCCeEEE
Confidence 45677788899998888774 67899999987653 345667999999999999999988885 68999999
Q ss_pred EEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEE-EEecCCcEEEEEcCCCCCCcccccccccCcccceeee
Q 018697 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL-VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (351)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (351)
||+. +.+.+..+.+|...|.+++|+|++...++ +++.|+.|++||+.++..... ..+|...|.++
T Consensus 684 wd~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~-----~~~h~~~v~~~ 749 (1249)
T 3sfz_A 684 WDSA---------TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNT-----MFGHTNSVNHC 749 (1249)
T ss_dssp EETT---------TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEE-----ECCCSSCEEEE
T ss_pred EECC---------CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhe-----ecCCCCCEEEE
Confidence 9998 67888899999999999999997544344 558899999999987543322 23577799999
Q ss_pred EECCCCCcEEEeecCCeEEEEEcccCCcCceeecc---------------eeEEEEcCCCCCcEEEEecCCCeEEEEecc
Q 018697 175 AWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA---------------HVRNVDYDTKKKHLLVTAADESGIHLWDLR 239 (351)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---------------~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 239 (351)
+|+|+++.+++++.||.|++||+++++....+... .+.+++|+|++. .+++++ ++.+.+||+.
T Consensus 750 ~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~-~~~v~~~d~~ 827 (1249)
T 3sfz_A 750 RFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD-KIIVAA-KNKVLLFDIH 827 (1249)
T ss_dssp EECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS-EEEEEE-TTEEEEEETT
T ss_pred EEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC-EEEEEc-CCcEEEEEec
Confidence 99999999999999999999999987655444311 178899999998 566665 6899999999
Q ss_pred cCCcceeEee-CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEE
Q 018697 240 MLKAPIQELP-GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVY 318 (351)
Q Consensus 240 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (351)
+ ...+..+. +|...|.+++|+|++ .++++++.|+.|++||+.. +..+..+.+|...|+
T Consensus 828 ~-~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~v~vwd~~~-------------------~~~~~~~~~h~~~v~ 886 (1249)
T 3sfz_A 828 T-SGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDS-------------------RLKVADCRGHLSWVH 886 (1249)
T ss_dssp T-CCEEEEEECSSSSCCCEEEECSST-TEEEEECSSSCEEEEETTT-------------------TEEEEEECCCSSCEE
T ss_pred C-CCceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEEcCC-------------------CceeeecCCCccceE
Confidence 8 44455554 899999999999999 9999999999999999998 888899999999999
Q ss_pred EEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 319 GLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 319 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+++|+|+++ .+++++.|+.|++|++..
T Consensus 887 ~v~~spdg~-~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 887 GVMFSPDGS-SFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEEHHH
T ss_pred EEEECCCCC-EEEEEeCCCeEEEEEccc
Confidence 999999998 899999999999999764
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.4e-33 Score=260.13 Aligned_cols=282 Identities=12% Similarity=0.136 Sum_probs=214.8
Q ss_pred eEeeeecCCCCcc-eEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCc---ceeeeeeCCC-CCceEEEEeecCCcc
Q 018697 17 RCISDVKADTDHT-SFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPN---EIWDLSSCPF-DQRIFSTVFSTGESY 91 (351)
Q Consensus 17 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~---~v~~i~~~~~-~~~l~~~~~~~~~d~ 91 (351)
..+..+.++++.. .++.+. .++.+.+|++... .....+.+|.. .|.+++|+|+ ++.|+++ +.|+
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~----~d~~v~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----~~dg 229 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVG----DDGSVVFYQGPPF---KFSASDRTHHKQGSFVRDVEFSPDSGEFVITV----GSDR 229 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEE----TTTEEEEEETTTB---EEEEEECSSSCTTCCEEEEEECSTTCCEEEEE----ETTC
T ss_pred ccEEEEEECCCCCcEEEEEe----CCCcEEEEeCCCc---ceeeeecccCCCCceEEEEEECCCCCCEEEEE----eCCC
Confidence 3456667777776 566553 6789999986553 23456778998 9999999999 8888775 6899
Q ss_pred eEEEEEcccccCCCCCCcceeeeee-e---ccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccc-----
Q 018697 92 GAAIWQIPELYGQLNSPQLERIAAL-D---AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK----- 162 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~----- 162 (351)
.|++||+. ..+.+..+ . .|...|.+++|+ ++. .+++++.|+.|++||+.++.........
T Consensus 230 ~i~vwd~~---------~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 298 (615)
T 1pgu_A 230 KISCFDGK---------SGEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDKQQLG 298 (615)
T ss_dssp CEEEEETT---------TCCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCGG
T ss_pred eEEEEECC---------CCCEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCccc
Confidence 99999998 56777777 6 899999999999 777 3677788999999999864322111100
Q ss_pred -----------------------------------ccc---------------------------------Ccccceeee
Q 018697 163 -----------------------------------QSS---------------------------------GMLHYLSGG 174 (351)
Q Consensus 163 -----------------------------------~~~---------------------------------~~~~~v~~~ 174 (351)
... +|...|.++
T Consensus 299 ~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~ 378 (615)
T 1pgu_A 299 NQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSL 378 (615)
T ss_dssp GCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEE
T ss_pred CceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEE
Confidence 011 233344444
Q ss_pred EECCCCCcEEEeecCCeEEEEEcc--------------------------------------------------------
Q 018697 175 AWDPHDVNAVAATCESSVQFWDLR-------------------------------------------------------- 198 (351)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~iwd~~-------------------------------------------------------- 198 (351)
+| +++..+++++.|+.|++||++
T Consensus 379 ~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (615)
T 1pgu_A 379 DN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQN 457 (615)
T ss_dssp EC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSS
T ss_pred EE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCC
Confidence 44 335556666555555555544
Q ss_pred ------------------cCCcC-ceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC-CCCce
Q 018697 199 ------------------SMGKT-NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG-HTHWT 255 (351)
Q Consensus 199 ------------------~~~~~-~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v 255 (351)
+++.. ..+. .| +.+++|+|+++ +|++++.|+.|++||+++ .+++..+.+ |...|
T Consensus 458 ~l~~~~~~d~~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h~~~v 534 (615)
T 1pgu_A 458 YVAVGLEEGNTIQVFKLSDLEVSFDLKT-PLRAKPSYISISPSET-YIAAGDVMGKILLYDLQS-REVKTSRWAFRTSKI 534 (615)
T ss_dssp EEEEEETTTSCEEEEETTEEEEEEECSS-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEECCSCCCSSCE
T ss_pred EEEEeecCCCeEEEEECCCccccccccC-CccCceEEEEECCCCC-EEEEcCCCCeEEEeeCCC-CcceeEeecCCCCce
Confidence 22211 1111 23 99999999998 899999999999999987 667777877 99999
Q ss_pred eEEEecC----------CCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccc-ccceeeccccceEEEEEeCC
Q 018697 256 WAVCCNP----------EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN-SLLNSYSDYEDSVYGLAWSS 324 (351)
Q Consensus 256 ~~~~~~~----------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~ 324 (351)
++++|+| ++ .+|++++.|+.|++||+.. + +++..+.+|...|++++|+|
T Consensus 535 ~~~~~sp~~~~~~~~~~~~-~~l~~~~~dg~i~iw~~~~-------------------~~~~~~~~~~h~~~v~~l~~s~ 594 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEE-DLVATGSLDTNIFIYSVKR-------------------PMKIIKALNAHKDGVNNLLWET 594 (615)
T ss_dssp EEEEECCCC------CCSC-CEEEEEETTSCEEEEESSC-------------------TTCCEEETTSSTTCEEEEEEEE
T ss_pred eEEEEcCccccccccccCC-CEEEEEcCCCcEEEEECCC-------------------CceechhhhcCccceEEEEEcC
Confidence 9999999 88 9999999999999999998 5 77888899999999999999
Q ss_pred CCCceEEEeeeCCeEEEeecCc
Q 018697 325 REPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 325 ~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+++ |++++.||.|++|+++.
T Consensus 595 ~~~--l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 595 PST--LVSSGADACIKRWNVVL 614 (615)
T ss_dssp TTE--EEEEETTSCEEEEEEC-
T ss_pred CCC--eEEecCCceEEEEeeec
Confidence 987 88999999999999874
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-34 Score=250.59 Aligned_cols=259 Identities=13% Similarity=0.160 Sum_probs=200.3
Q ss_pred eeecCCcceeeeeeCCC---C-CceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec-----cccceeEEEecC
Q 018697 60 GLFSHPNEIWDLSSCPF---D-QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA-----HVGKINCVLWWS 130 (351)
Q Consensus 60 ~~~~h~~~v~~i~~~~~---~-~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~ 130 (351)
...+|.+.|.+++|+|+ + ..++++ +.++.|++|++. ..+.+..+.. |...|.+++|+|
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~----~~~~~v~vw~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFAT----VGSNRVTLYECH---------SQGEIRLLQSYVDADADENFYTCAWTY 79 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEE----EETTEEEEEEEC---------GGGCEEEEEEEECSCTTCCEEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEE----CCCCEEEEEEcC---------CCcEEEeeeeccccCCCCcEEEEEecc
Confidence 34589999999999984 3 345554 466699999998 3444444443 567899999999
Q ss_pred CCC---CcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECC-CCCcEEEeecCCeEEEEEcccCCcCcee
Q 018697 131 SGR---HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSI 206 (351)
Q Consensus 131 ~~~---~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 206 (351)
++. .++++++.|+.|++||+.++..... ..+|...|.+++|+| ++..|++++.|+.|++||+++++....+
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKH-----YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEE-----EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeee-----ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 943 2467778999999999987543322 235677999999999 8899999999999999999998877776
Q ss_pred e--cce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCccee----------------------------EeeCCCC
Q 018697 207 E--HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQ----------------------------ELPGHTH 253 (351)
Q Consensus 207 ~--~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----------------------------~~~~~~~ 253 (351)
. ..| |.+++|+|++. ++++++.|+.|++||++. .+.+. ....|..
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred cccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 2 233 99999999998 899999999999999986 33332 2234899
Q ss_pred ceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCC--CCceEE
Q 018697 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR--EPWIFA 331 (351)
Q Consensus 254 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~ 331 (351)
.|.+++|+ + .+|++++.|+.|++||++.......... ........+..+..|...|++++|+|+ +. +|+
T Consensus 233 ~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~ 303 (366)
T 3k26_A 233 YVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIK-----PSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLA 303 (366)
T ss_dssp CCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCC-----TTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEE
T ss_pred eEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccc-----cCCcchheeccccccCCcEEEEEEcCCCCCc-EEE
Confidence 99999999 5 7999999999999999987322111000 000113456777889999999999999 88 899
Q ss_pred EeeeCCeEEEeecCcc
Q 018697 332 SLSYDGRVVVESVKPF 347 (351)
Q Consensus 332 s~~~dg~v~vw~~~~~ 347 (351)
+++.||.|++||+...
T Consensus 304 ~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVE 319 (366)
T ss_dssp EECTTSCEEEEECCSS
T ss_pred EEecCCcEEEEECCCC
Confidence 9999999999999863
No 91
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.3e-33 Score=248.46 Aligned_cols=242 Identities=15% Similarity=0.212 Sum_probs=202.2
Q ss_pred EEEeeecCCcce-eeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCc
Q 018697 57 ICEGLFSHPNEI-WDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHD 135 (351)
Q Consensus 57 ~~~~~~~h~~~v-~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 135 (351)
....+.+|...| .++.+ +++.|+++ +.|+.|++||+. +.+.+..+.+|.+.|.+++|+|++ .
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sg----s~dg~i~vwd~~---------~~~~~~~~~~h~~~V~~l~~~~~~--~ 175 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITG----ADDKMIRVYDSI---------NKKFLLQLSGHDGGVWALKYAHGG--I 175 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEE----ETTSCEEEEETT---------TTEEEEEECCCSSCEEEEEECSTT--E
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEE----cCCCcEEEEECC---------CCcEEEEEeCCCcCEEEEEEcCCC--E
Confidence 345677898875 66666 45677664 799999999998 678889999999999999999988 3
Q ss_pred EEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEEC--CCCCcEEEeecCCeEEEEEcccCCcCce--------
Q 018697 136 KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD--PHDVNAVAATCESSVQFWDLRSMGKTNS-------- 205 (351)
Q Consensus 136 ~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~~~~-------- 205 (351)
+++++.|++|++||+.++.... ...+|...|.+++|+ ++++++++++.|+.|++||++++.....
T Consensus 176 l~s~s~dg~i~vwd~~~~~~~~-----~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~ 250 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCCTH-----VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP 250 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEE-----EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSS
T ss_pred EEEEeCCCCEEEEECCCCcEEE-----EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcc
Confidence 8888999999999998654322 223567799999998 5778899999999999999997764321
Q ss_pred --------------eecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeE
Q 018697 206 --------------IEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI 268 (351)
Q Consensus 206 --------------~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 268 (351)
...+| +.++ ++++. ++++++.|+.|++||+++ .+++..+.+|...|.+++|+|++ .++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l 325 (464)
T 3v7d_B 251 LVFHTPEENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHER-KRC 325 (464)
T ss_dssp EEESCGGGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTT-TEE
T ss_pred eEeeccCCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCC-CEE
Confidence 12233 5454 56777 899999999999999997 77888999999999999999999 999
Q ss_pred EEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 269 LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 269 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++++.|+.|++||+++ ++++..+.+|...|.+++|++ . ++++++.||.|++||+.+.
T Consensus 326 ~sg~~dg~i~vwd~~~-------------------~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 326 ISASMDTTIRIWDLEN-------------------GELMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp EEEETTSCEEEEETTT-------------------TEEEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTC
T ss_pred EEEeCCCcEEEEECCC-------------------CcEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCC
Confidence 9999999999999998 889999999999999999984 4 8999999999999999764
No 92
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.8e-34 Score=282.00 Aligned_cols=273 Identities=14% Similarity=0.259 Sum_probs=232.0
Q ss_pred eeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEc
Q 018697 19 ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (351)
+..+.++++...+++|+ .++.+.+|++.... ....+.+|...|.+++|+|+++.++++ +.|+.|++|++
T Consensus 964 i~~~~~sp~g~~l~~g~----~~g~i~i~d~~~~~---~~~~~~~h~~~v~~l~~s~dg~~l~s~----~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGD----EDGAIKIIELPNNR---VFSSGVGHKKAVRHIQFTADGKTLISS----SEDSVIQVWNW 1032 (1249)
T ss_dssp EEEEEECTTSSEEEEEE----TTSCCEEEETTTTS---CEEECCCCSSCCCCEEECSSSSCEEEE----CSSSBEEEEET
T ss_pred EEEEEEcCCCCEEEEEc----CCCCEEEEEcCCCc---eeeecccCCCceEEEEECCCCCEEEEE----cCCCEEEEEEC
Confidence 45566778888888875 57889999987643 235567899999999999999999885 79999999999
Q ss_pred ccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECC
Q 018697 99 PELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP 178 (351)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 178 (351)
. ..+.. .+..|...|.++.|+|++. +++++.|+.|++||+.++.....+ .+|...|.+++|+|
T Consensus 1033 ~---------~~~~~-~~~~~~~~v~~~~~~~~~~--l~~~~~dg~v~vwd~~~~~~~~~~-----~~~~~~v~~~~~s~ 1095 (1249)
T 3sfz_A 1033 Q---------TGDYV-FLQAHQETVKDFRLLQDSR--LLSWSFDGTVKVWNVITGRIERDF-----TCHQGTVLSCAISS 1095 (1249)
T ss_dssp T---------TTEEE-CCBCCSSCEEEEEECSSSE--EEEEESSSEEEEEETTTTCCCEEE-----ECCSSCCCCEEECS
T ss_pred C---------CCceE-EEecCCCcEEEEEEcCCCc--EEEEECCCcEEEEECCCCceeEEE-----cccCCcEEEEEECC
Confidence 8 44443 4558999999999999876 788889999999999876544332 34667899999999
Q ss_pred CCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-------
Q 018697 179 HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL------- 248 (351)
Q Consensus 179 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------- 248 (351)
+++.+++++.|+.|++||+.+++....+. +| |.+++|+|+++ ++++++.||.|++||+++ ++.+..+
T Consensus 1096 d~~~l~s~s~d~~v~iwd~~~~~~~~~l~-~h~~~v~~~~~s~dg~-~lat~~~dg~i~vwd~~~-~~~~~~~~~~~~~~ 1172 (1249)
T 3sfz_A 1096 DATKFSSTSADKTAKIWSFDLLSPLHELK-GHNGCVRCSAFSLDGI-LLATGDDNGEIRIWNVSD-GQLLHSCAPISVEE 1172 (1249)
T ss_dssp SSSSCEEECCSSCCCEECSSSSSCSBCCC-CCSSCEEEEEECSSSS-EEEEEETTSCCCEEESSS-SCCCCCCCCCC---
T ss_pred CCCEEEEEcCCCcEEEEECCCcceeeeec-cCCCcEEEEEECCCCC-EEEEEeCCCEEEEEECCC-CceEEEeccccccc
Confidence 99999999999999999999998887776 44 99999999998 899999999999999987 4444443
Q ss_pred --eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCC
Q 018697 249 --PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSRE 326 (351)
Q Consensus 249 --~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 326 (351)
..|...|++++|+|++ .+|++++ |.|++||+.+ ++.+..+..|...|.+++|+|++
T Consensus 1173 ~~~~~~~~v~~l~fs~dg-~~l~s~~--g~v~vwd~~~-------------------g~~~~~~~~~~~~i~~~~~s~dg 1230 (1249)
T 3sfz_A 1173 GTATHGGWVTDVCFSPDS-KTLVSAG--GYLKWWNVAT-------------------GDSSQTFYTNGTNLKKIHVSPDF 1230 (1249)
T ss_dssp ----CCSCCCEEEECTTS-SCEEEES--SSEEEBCSSS-------------------CBCCCCCCCSSCCCCCCEECSSS
T ss_pred cccccCceEEEEEECCCC-CEEEECC--CeEEEEECCC-------------------CceeeeeeccCCcccEEEECCCC
Confidence 5789999999999999 8888886 8999999998 88888898899999999999999
Q ss_pred CceEEEeeeCCeEEEeecC
Q 018697 327 PWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 327 ~~~l~s~~~dg~v~vw~~~ 345 (351)
. ++++++.||.|++|++.
T Consensus 1231 ~-~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1231 R-TYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp C-CEEEECTTCCEEEECCC
T ss_pred C-EEEEecCCcEEEEEeec
Confidence 9 89999999999999975
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.8e-33 Score=246.32 Aligned_cols=251 Identities=11% Similarity=0.143 Sum_probs=196.7
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecC-CCCCcEEEEecCCc
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS-SGRHDKLVSIDEEN 144 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~d~~ 144 (351)
.....++++|+...++++ ++.||.|+||++..... ....+..+.+|.+.|.+++|+| ++. ++++++.|+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~---~~~~g~i~v~~~~~~~~-----~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~dg~ 105 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICE---ASGGGAFLVLPLGKTGR-----VDKNVPLVCGHTAPVLDIAWCPHNDN-VIASGSEDCT 105 (402)
T ss_dssp CSSCSEEECSSEEEEEBC---CSSSCCEEEEETTCCEE-----CCTTCCCBCCCSSCEEEEEECTTCTT-EEEEEETTSE
T ss_pred cCCCcEEECCCeEEEEEE---EcCCCEEEEEECccCCC-----CCCCCceEecCCCCEEEEEeCCCCCC-EEEEEeCCCe
Confidence 344567888877666654 57899999999863100 0124456789999999999999 666 4777789999
Q ss_pred EEEEEcCCCCCCccc--ccccccCcccceeeeEECCCC-CcEEEeecCCeEEEEEcccCCcCceee-cce---eEEEEcC
Q 018697 145 IFLWSLDCSNKNAQV--QSKQSSGMLHYLSGGAWDPHD-VNAVAATCESSVQFWDLRSMGKTNSIE-HAH---VRNVDYD 217 (351)
Q Consensus 145 v~iwd~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~---v~~~~~~ 217 (351)
|++||+.++...... ......+|...|.+++|+|++ ..|++++.|+.|++||+++++....+. ..| |.+++|+
T Consensus 106 v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 185 (402)
T 2aq5_A 106 VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS 185 (402)
T ss_dssp EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC
T ss_pred EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC
Confidence 999999875422111 112234677899999999998 588899999999999999998887773 244 9999999
Q ss_pred CCCCcEEEEecCCCeEEEEecccCCcceeEe-eCCCCc-eeEEEecCCCCCeEEEe---eCCCeEEEEEcCCCCCCCCCC
Q 018697 218 TKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHW-TWAVCCNPEYDGFILSA---GTDSTVNLWLVSTSNHDELPS 292 (351)
Q Consensus 218 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~ 292 (351)
|++. +|++++.|+.|++||+++ .+.+..+ ..|... +.++.|+|++ .+|++| +.|+.|++||++.
T Consensus 186 ~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~-------- 254 (402)
T 2aq5_A 186 RDGA-LICTSCRDKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKH-------- 254 (402)
T ss_dssp TTSS-CEEEEETTSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTB--------
T ss_pred CCCC-EEEEEecCCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCcc--------
Confidence 9998 799999999999999997 6677777 678776 8999999999 899999 7899999999987
Q ss_pred cccccCCccccccc-ceeec-cccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 293 ESLVESPNQRANSL-LNSYS-DYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 293 ~~~~~~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
... +.... .|...+.+++|+|+++.++++++.|+.|++|++.+.
T Consensus 255 -----------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 255 -----------LEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp -----------CSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred -----------ccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 332 32222 466779999999999944456668999999999764
No 94
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.7e-33 Score=238.46 Aligned_cols=224 Identities=13% Similarity=0.091 Sum_probs=177.5
Q ss_pred CCCEEEEEEeCCCCCeEEEEe------eecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceee
Q 018697 40 EENEVHLLRLSSGGTELICEG------LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERI 113 (351)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~------~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~ 113 (351)
.++.+++|++......+.... ...+...+.+++|+|||+.++++. ++.|++|+|||+. +.+++
T Consensus 102 ~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as--~~~d~~i~iwd~~---------~~~~~ 170 (365)
T 4h5i_A 102 GNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIAS--SKVPAIMRIIDPS---------DLTEK 170 (365)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEE--SCSSCEEEEEETT---------TTEEE
T ss_pred CCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEE--CCCCCEEEEeECC---------CCcEE
Confidence 567899999887665444322 123445689999999999987664 6789999999998 66777
Q ss_pred eeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCC---
Q 018697 114 AALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES--- 190 (351)
Q Consensus 114 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--- 190 (351)
..+. |...|.+++|+|+++ +++++.++.+.+|+..++...... ....|...+.+++|+|+++.+++++.++
T Consensus 171 ~~~~-~~~~V~~v~fspdg~--~l~s~s~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFSTDGK--VVAYITGSSLEVISTVTGSCIARK---TDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp EEEE-CSSCCCEEEECTTSS--EEEEECSSCEEEEETTTCCEEEEE---CCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred EEeC-CCCceEEEEEccCCc--eEEeccceeEEEEEeccCcceeee---ecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 7774 778899999999999 455544667788887765433222 2235667899999999999999998776
Q ss_pred -eEEEEEcccCCcC----ceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-eCCCCceeEEEec
Q 018697 191 -SVQFWDLRSMGKT----NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCN 261 (351)
Q Consensus 191 -~i~iwd~~~~~~~----~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~ 261 (351)
.+++||+...... ..+. .| |.+++|+|+++ +|++|+.|++|+|||+++ .+++..+ .+|..+|++++|+
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAITEVTIS 321 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEETTSSSSCEEEEEEC
T ss_pred eEEeecccccceecceeeeeec-CCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCC-CcEEEEecCcccCCEEEEEEC
Confidence 6888998765432 1222 33 99999999998 899999999999999997 6677764 6899999999999
Q ss_pred CCCCCeEEEeeCCCeEEEEEcCC
Q 018697 262 PEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 262 ~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
|+| .+|+|++.|++|+|||+..
T Consensus 322 pdg-~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 322 PDS-TYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTS-CEEEEEETTSEEEEEECCT
T ss_pred CCC-CEEEEEeCCCeEEEEEcCC
Confidence 999 9999999999999999965
No 95
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-32 Score=253.70 Aligned_cols=287 Identities=16% Similarity=0.192 Sum_probs=229.5
Q ss_pred eEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCe-EEEEeeecCCcc-eeeeeeCC--CCCceEEEEeecCCcce
Q 018697 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTE-LICEGLFSHPNE-IWDLSSCP--FDQRIFSTVFSTGESYG 92 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~h~~~-v~~i~~~~--~~~~l~~~~~~~~~d~~ 92 (351)
..+..+.++|++..++++. ++.+.+|++.....+ .....+.+|... |.+++|+| +++.|+++ +.|+.
T Consensus 19 ~~v~~~~~spdg~~l~~~~-----~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~----~~dg~ 89 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-----GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG----DESGK 89 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-----TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEE----ETTSE
T ss_pred CceeEEEECCCCCEEEEec-----CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEe----cCCCE
Confidence 4566777888999898875 678999998854111 234667899999 99999999 99988885 68999
Q ss_pred EEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecC----CcEEEEEcCCCCCCcccccccccCcc
Q 018697 93 AAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE----ENIFLWSLDCSNKNAQVQSKQSSGML 168 (351)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~ 168 (351)
|++|++..... ......+....+..|...|.+++|+|+++. +++++.+ +.|++||.. ... ....+|.
T Consensus 90 v~vw~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~~~~~~~~v~~~d~~--~~~-----~~~~~~~ 160 (615)
T 1pgu_A 90 VIVWGWTFDKE-SNSVEVNVKSEFQVLAGPISDISWDFEGRR-LCVVGEGRDNFGVFISWDSG--NSL-----GEVSGHS 160 (615)
T ss_dssp EEEEEEEEEGG-GTEEEEEEEEEEECCSSCEEEEEECTTSSE-EEEEECCSSCSEEEEETTTC--CEE-----EECCSCS
T ss_pred EEEEeCCCCcc-cccccccccchhhcccccEEEEEEeCCCCE-EEEeccCCCCccEEEEEECC--Ccc-----eeeecCC
Confidence 99999961000 000023667788889999999999999995 5555555 688888833 221 1223577
Q ss_pred cceeeeEECCCCC-cEEEeecCCeEEEEEcccCCcCceeec--c---eeEEEEcCCC-CCcEEEEecCCCeEEEEecccC
Q 018697 169 HYLSGGAWDPHDV-NAVAATCESSVQFWDLRSMGKTNSIEH--A---HVRNVDYDTK-KKHLLVTAADESGIHLWDLRML 241 (351)
Q Consensus 169 ~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~--~---~v~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~ 241 (351)
..|.+++|+|+++ .+++++.|+.|++||+++++....+.. . .+.+++|+|+ ++ ++++++.|+.|++||+++
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~- 238 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKS- 238 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTT-
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCC-
Confidence 7999999999998 688999999999999998877766651 2 2899999999 87 899999999999999987
Q ss_pred CcceeEe-e---CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccc----
Q 018697 242 KAPIQEL-P---GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY---- 313 (351)
Q Consensus 242 ~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 313 (351)
.+.+..+ . .|...|.+++|+ ++ .+|++++.|+.|++||++. ++.+..+..+
T Consensus 239 ~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~-------------------~~~~~~~~~~~~~~ 297 (615)
T 1pgu_A 239 GEFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVWDVTT-------------------SKCVQKWTLDKQQL 297 (615)
T ss_dssp CCEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEEETTT-------------------TEEEEEEECCTTCG
T ss_pred CCEeEEecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEEECCC-------------------CcEEEEEcCCCCcc
Confidence 6677887 5 899999999999 88 9999999999999999998 7777777665
Q ss_pred cceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 314 EDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 314 ~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
...+.++.|. ++. ++++++.|+.|++|++..
T Consensus 298 ~~~~~~~~~~-~~~-~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 298 GNQQVGVVAT-GNG-RIISLSLDGTLNFYELGH 328 (615)
T ss_dssp GGCEEEEEEE-ETT-EEEEEETTSCEEEEETTE
T ss_pred cCceeEEEeC-CCC-eEEEEECCCCEEEEECCC
Confidence 4678888886 677 899999999999999875
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-32 Score=240.35 Aligned_cols=248 Identities=8% Similarity=0.055 Sum_probs=192.1
Q ss_pred cCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee--ccccceeEEEecCCCCCcEEEEe
Q 018697 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSI 140 (351)
Q Consensus 63 ~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~ 140 (351)
+|.+.|.+++|+|+++.|+++ ++.|+.|+||++.. ...+.+..+. .|...|.+++|+|++.. +++++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~---~~~dg~v~iwd~~~-------~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~ 168 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIAC---ADSDKSLLVFDVDK-------TSKNVLKLRKRFCFSKRPNAISIAEDDTT-VIIAD 168 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEE---EGGGTEEEEEEECS-------SSSSCEEEEEEEECSSCEEEEEECTTSSE-EEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEE---ECCCCeEEEEECcC-------CCCceeeeeecccCCCCceEEEEcCCCCE-EEEEe
Confidence 455579999999999997555 47899999999871 1234455554 56789999999999984 66678
Q ss_pred cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCC---CCcEEEeecCCeEEEEEcccCCcCceeecce---eEEE
Q 018697 141 DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH---DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214 (351)
Q Consensus 141 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~ 214 (351)
.++.|++|++.+...... ......+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+..+| |.++
T Consensus 169 ~~g~v~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~ 247 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKF-TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSI 247 (450)
T ss_dssp TTSEEEEEETTSCCCSSC-CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEE
T ss_pred CCCcEEEEecCCcccccc-cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEE
Confidence 899999999986543320 11122356679999999999 8899999999999999999988777655455 9999
Q ss_pred EcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC-------------------------CCCceeEEEecCCCCCeEE
Q 018697 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG-------------------------HTHWTWAVCCNPEYDGFIL 269 (351)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------------------~~~~v~~~~~~~~~~~~l~ 269 (351)
+|+ ++. +|++++.|+.|++||+++ ++++..+.. ....|.+++|+|++ .+|+
T Consensus 248 ~~s-d~~-~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~ 323 (450)
T 2vdu_B 248 CCG-KDY-LLLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL-PFVA 323 (450)
T ss_dssp EEC-STT-EEEEEESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS-SEEE
T ss_pred EEC-CCC-EEEEEeCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC-CEEE
Confidence 999 887 899999999999999997 666666652 23568999999999 8888
Q ss_pred Eee-CCCeEEEEEc--CCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeee-------CCeE
Q 018697 270 SAG-TDSTVNLWLV--STSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY-------DGRV 339 (351)
Q Consensus 270 s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------dg~v 339 (351)
+++ .|+.|++|++ ... .....+..+..| ..|.+++|+|+ . ++++.+. +..|
T Consensus 324 ~~~~~d~~i~iw~~~~~~~----------------~~l~~~~~~~~~-~~v~~~~~~~~-~-~~v~~~~~~~~~~~~~~i 384 (450)
T 2vdu_B 324 FFVEATKCIIILEMSEKQK----------------GDLALKQIITFP-YNVISLSAHND-E-FQVTLDNKESSGVQKNFA 384 (450)
T ss_dssp EEETTCSEEEEEEECSSST----------------TCEEEEEEEECS-SCEEEEEEETT-E-EEEEECCTTCCSSCCCSE
T ss_pred EEECCCCeEEEEEeccCCC----------------CceeeccEeccC-CceEEEEecCC-c-EEEEEecccCCCCCCcce
Confidence 888 8999999999 430 002566677777 77999999995 3 4544432 5568
Q ss_pred EEeecC
Q 018697 340 VVESVK 345 (351)
Q Consensus 340 ~vw~~~ 345 (351)
.+|.+.
T Consensus 385 ~v~~~~ 390 (450)
T 2vdu_B 385 KFIEYN 390 (450)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888765
No 97
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-33 Score=266.05 Aligned_cols=306 Identities=9% Similarity=0.017 Sum_probs=205.0
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCe-EEE-------EeeecCCcceeeeeeCCCCCceEEEEeecCC
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTE-LIC-------EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE 89 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~-~~~-------~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~ 89 (351)
.+..+.++++...++.|+ .++.|++|++...... ... ....+|.+.|.+++|+|++..++++ ++.
T Consensus 100 ~V~~v~~sp~g~~l~sgs----~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~---g~~ 172 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGL----QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI---SYE 172 (902)
T ss_dssp CEEEEECCTTCSEEEEEE----TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE---ECS
T ss_pred CEEEEEECCCCCEEEEEc----CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE---EeC
Confidence 466788889999888875 5899999998764211 000 1235799999999999975444444 478
Q ss_pred cceEEEEEcccccCCCCCCcceeeeeeecc------------------ccceeEEEecCCCCCcEEEEecCCcEEEEEcC
Q 018697 90 SYGAAIWQIPELYGQLNSPQLERIAALDAH------------------VGKINCVLWWSSGRHDKLVSIDEENIFLWSLD 151 (351)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~ 151 (351)
|+.| +||+. ..+.+..+..| ...|.+++|+|++.. +++++.|+.|++||+.
T Consensus 173 dg~v-lWd~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~-lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 173 YVTL-TYSLV---------ENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH-IITIHEDNSLVFWDAN 241 (902)
T ss_dssp SCEE-EEETT---------TTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE-EEEEETTCCEEEEETT
T ss_pred CCcE-EEECC---------CCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE-EEEEECCCeEEEEECC
Confidence 9999 99998 45666666544 578999999999984 6677899999999998
Q ss_pred CCCCCcc-ccc---ccc------c---CcccceeeeEEC----CCC-CcE------------------------------
Q 018697 152 CSNKNAQ-VQS---KQS------S---GMLHYLSGGAWD----PHD-VNA------------------------------ 183 (351)
Q Consensus 152 ~~~~~~~-~~~---~~~------~---~~~~~v~~~~~~----~~~-~~l------------------------------ 183 (351)
+++.... .+. .+. . .|...|.+++|+ |++ ..+
T Consensus 242 ~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~ 321 (902)
T 2oaj_A 242 SGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSY 321 (902)
T ss_dssp TCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCH
T ss_pred CCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccch
Confidence 7543221 000 000 0 123356666663 332 122
Q ss_pred ----------------------------------------------EEeecCCeEEEEEcccCCcCce-------ee---
Q 018697 184 ----------------------------------------------VAATCESSVQFWDLRSMGKTNS-------IE--- 207 (351)
Q Consensus 184 ----------------------------------------------~~~~~d~~i~iwd~~~~~~~~~-------~~--- 207 (351)
++++.|+.|++||+.++..... +.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~ 401 (902)
T 2oaj_A 322 EGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLR 401 (902)
T ss_dssp HHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBT
T ss_pred hhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccC
Confidence 3333345566666544321110 00
Q ss_pred ------------------------------cce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcce--eEe----
Q 018697 208 ------------------------------HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI--QEL---- 248 (351)
Q Consensus 208 ------------------------------~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~---- 248 (351)
.+| +.+++|+|+++ +|++|+.|++|++||+... ... ..+
T Consensus 402 ~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~-~laSgs~DgtVrlWd~~~g-~~~~~~~~~~~l 479 (902)
T 2oaj_A 402 PLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGT-AFITGHSNGSVRIYDASHG-DIQDNASFEVNL 479 (902)
T ss_dssp TBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEE-EEEEEETTSEEEEEESSCC-TTTTTBCEEEEH
T ss_pred CCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCc-EEEEecCCCcEEEEECCCc-cccCCceEEeec
Confidence 011 34456788887 8999999999999999863 211 111
Q ss_pred e-----CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCC-----CCCCc----c----cccCC-----------
Q 018697 249 P-----GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD-----ELPSE----S----LVESP----------- 299 (351)
Q Consensus 249 ~-----~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~----~----~~~~~----------- 299 (351)
. +|...|++++|+|++ .+||+|+.||+|+|||+...... ..... . ....+
T Consensus 480 ~~~~~~~h~~~V~svafspdg-~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (902)
T 2oaj_A 480 SRTLNKAKELAVDKISFAAET-LELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAP 558 (902)
T ss_dssp HHHTTCSSSCCEEEEEEETTT-TEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCC
T ss_pred hhhcCCCCCCceeEEEecCCC-CeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCC
Confidence 1 788999999999999 99999999999999999763110 00000 0 00000
Q ss_pred --cccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 300 --NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 300 --~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
.+...+++..+.+|...|++++|+|+| +||+|+.|++|++||++.
T Consensus 559 ~~~~~g~~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 559 TGVRQGFMPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp TTCSEEEEEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTT
T ss_pred CCCCCccceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCC
Confidence 000124567788899999999999998 799999999999999875
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.9e-32 Score=235.64 Aligned_cols=239 Identities=11% Similarity=0.081 Sum_probs=182.3
Q ss_pred eeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEE
Q 018697 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVS 139 (351)
Q Consensus 60 ~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 139 (351)
....|...|.+++|+|+++.|+++ +.+ .++||++. ..+...... ...+..+++.++++.+++++
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g----~~~-~~~iw~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILS----TLK-SFEIYNVH---------PVAHIMSQE--MRHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEE----CSS-EEEEEEET---------TEEEEEEEE--CSCCCEEEECTTSSEEEEEC
T ss_pred ccccCCCceEEEEECCCCCEEEEE----cCC-EEEEEecC---------Ccceeeeee--cCCeEEEEEcCCCCEEEEEE
Confidence 446799999999999999888764 444 58899987 444443332 23578888998888645666
Q ss_pred ecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccC-CcCceeecceeEEEEcCC
Q 018697 140 IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM-GKTNSIEHAHVRNVDYDT 218 (351)
Q Consensus 140 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~v~~~~~~~ 218 (351)
+.|++|++||+.++.....+. +...|.+++|+++. +++ ..++.|++||+.++ +.+..+.. ....+++++
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~------~~~~v~~v~~~~~~--~~~-~~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~ 147 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIK------VDAPVKDLFLSREF--IVV-SYGDVISVFKFGNPWKRITDDIR-FGGVCEFSN 147 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEE------CSSCEEEEEECSSE--EEE-EETTEEEEEESSTTCCBSSCCEE-EEEEEEEET
T ss_pred CCccEEEEEECCCCcEEEEEE------CCCceEEEEEcCCE--EEE-EEcCEEEEEECCCCceeeEEecc-CCceEEEEc
Confidence 778999999998754433322 33489999998753 333 35889999999988 66666654 433344555
Q ss_pred CCCcEEEE-ecCCCeEEEEecccCC--------------cc-eeEeeCCCCceeEEEecCCCCCeEEEeeCCCe-EEEEE
Q 018697 219 KKKHLLVT-AADESGIHLWDLRMLK--------------AP-IQELPGHTHWTWAVCCNPEYDGFILSAGTDST-VNLWL 281 (351)
Q Consensus 219 ~~~~~l~~-~~~dg~i~i~d~~~~~--------------~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~-i~iwd 281 (351)
..++++ |+.||.|++||++... .+ +..+.+|...|++++|+|++ .+|++++.|++ |++||
T Consensus 148 --~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iwd 224 (355)
T 3vu4_A 148 --GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVFK 224 (355)
T ss_dssp --TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS-SEEEEEETTCSEEEEEE
T ss_pred --cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC-CEEEEEeCCCCEEEEEE
Confidence 323443 7899999999998632 12 78889999999999999999 99999999998 99999
Q ss_pred cCCCCCCCCCCcccccCCcccccccceeec-c-ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 282 VSTSNHDELPSESLVESPNQRANSLLNSYS-D-YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
+++ ++++..+. + |...|++++|+|+++ +|++++.|+.|++||++..
T Consensus 225 ~~~-------------------~~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 225 TED-------------------GVLVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTT-------------------CCEEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCC
T ss_pred CCC-------------------CcEEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCC
Confidence 998 88888887 5 999999999999999 8999999999999999753
No 99
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1e-33 Score=250.35 Aligned_cols=212 Identities=15% Similarity=0.230 Sum_probs=173.0
Q ss_pred eeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECC-CCCcEEEeecC
Q 018697 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCE 189 (351)
Q Consensus 111 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 189 (351)
........|...|+||+|+|....++++++.||.|+|||+.++...... ...+|...|++++|+| ++.+|++++.|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~---~~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI---KGIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE---CCCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE---EccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 3445567889999999999977666778899999999999865433222 2346788999999998 57889999999
Q ss_pred CeEEEEEcccCCcCceeecce-----eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCC
Q 018697 190 SSVQFWDLRSMGKTNSIEHAH-----VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY 264 (351)
Q Consensus 190 ~~i~iwd~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (351)
++|++||++++.. ..+...+ +.+++|+|++. +|++|+.||.|++||++ .+.+..+.+|...|++++|+|++
T Consensus 187 ~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~--~~~~~~~~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 187 GTTRLQDFKGNIL-RVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMD--GKELWNLRMHKKKVTHVALNPCC 262 (435)
T ss_dssp SCEEEEETTSCEE-EEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESS--SCBCCCSBCCSSCEEEEEECTTC
T ss_pred CEEEEeeccCCce-eEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccC--cceeEEEecccceEEeeeecCCC
Confidence 9999999986533 2332222 78899999998 89999999999999997 45678888999999999999999
Q ss_pred CCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeec
Q 018697 265 DGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 265 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
+.+|++++.|+.|++||++.... ...+....+|...|++++|+|++. +|++++.||.|++||+
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~----------------~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRG----------------KASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSA 325 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCS----------------SSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEES
T ss_pred ceEEEEecCcceeeEEecccccc----------------cceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEEC
Confidence 67899999999999999987211 122233457899999999999999 8999999999999998
Q ss_pred Cc
Q 018697 345 KP 346 (351)
Q Consensus 345 ~~ 346 (351)
.+
T Consensus 326 ~~ 327 (435)
T 4e54_B 326 SQ 327 (435)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 100
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=7.8e-32 Score=234.95 Aligned_cols=262 Identities=14% Similarity=0.143 Sum_probs=208.6
Q ss_pred CCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec
Q 018697 39 KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA 118 (351)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 118 (351)
..++.|++|++... . ....+..| ..+.+++|+|+++.++++ ++.|+.|++||+. +.+.+..+..
T Consensus 9 ~~d~~v~v~d~~~~--~-~~~~~~~~-~~~~~~~~s~dg~~l~~~---~~~d~~i~v~d~~---------~~~~~~~~~~ 72 (391)
T 1l0q_A 9 SESDNISVIDVTSN--K-VTATIPVG-SNPMGAVISPDGTKVYVA---NAHSNDVSIIDTA---------TNNVIATVPA 72 (391)
T ss_dssp TTTTEEEEEETTTT--E-EEEEEECS-SSEEEEEECTTSSEEEEE---EGGGTEEEEEETT---------TTEEEEEEEC
T ss_pred CCCCEEEEEECCCC--e-EEEEeecC-CCcceEEECCCCCEEEEE---CCCCCeEEEEECC---------CCeEEEEEEC
Confidence 46789999998753 2 22334444 568999999999988665 4689999999998 5677777765
Q ss_pred cccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcE-EEeecCCeEEEEEc
Q 018697 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA-VAATCESSVQFWDL 197 (351)
Q Consensus 119 h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~ 197 (351)
+. .+.+++|+|+++.++++++.++.|++||+.++....... +...+.+++|+|+++.+ ++++.++.|++||+
T Consensus 73 ~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 73 GS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp SS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE------CSSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 55 899999999999644555678999999998754332222 12368999999999988 56677999999999
Q ss_pred ccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEee---C
Q 018697 198 RSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG---T 273 (351)
Q Consensus 198 ~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~ 273 (351)
++++....+.... +.+++|+|+++.++++++.++.|++||+++ .+.+..+. +...+.+++|+|++ .+|++++ .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g-~~l~~~~~~~~ 222 (391)
T 1l0q_A 146 VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEG-TKAYVTNVDKY 222 (391)
T ss_dssp TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTS-SEEEEEEECSS
T ss_pred CCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCC-CEEEEEecCcC
Confidence 9988777776444 999999999986667888999999999987 55566555 56788999999999 7777777 6
Q ss_pred CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 274 DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 274 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++.|++||+.. ++.+..+..|.. +.+++|+|+++.++++++.|+.|++||+.+
T Consensus 223 ~~~v~~~d~~~-------------------~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 223 FNTVSMIDTGT-------------------NKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp CCEEEEEETTT-------------------TEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEECCC-------------------CeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 89999999998 777777777654 789999999985557888999999999875
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-32 Score=240.52 Aligned_cols=238 Identities=15% Similarity=0.242 Sum_probs=191.7
Q ss_pred ecCCcce--eeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec-cccceeEEEecCCCCCcEEE
Q 018697 62 FSHPNEI--WDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA-HVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 62 ~~h~~~v--~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~ 138 (351)
.+|...+ .+++|++ ..++++ +.|+.|++|++. ..+....+.. |...|.+++|+|++.. +++
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~----~~d~~v~lw~~~---------~~~~~~~~~~~~~~~v~~v~~s~~~~~-l~~ 151 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAV----ALERNVYVWNAD---------SGSVSALAETDESTYVASVKWSHDGSF-LSV 151 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEE----EETTEEEEEETT---------TCCEEEEEECCTTCCEEEEEECTTSSE-EEE
T ss_pred CCCcCCceEEEEeecC--CCEEEE----ECCCeEEEeeCC---------CCcEeEeeecCCCCCEEEEEECCCCCE-EEE
Confidence 3555544 3455654 556665 589999999998 4455555544 8899999999999984 667
Q ss_pred EecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCC-cCceeecce---eEEE
Q 018697 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG-KTNSIEHAH---VRNV 214 (351)
Q Consensus 139 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~---v~~~ 214 (351)
++.||.|++||+.++.....+ .+|...|.+++|+ +..+++++.|+.|++||++... ....+. .| |.++
T Consensus 152 ~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~ 223 (401)
T 4aez_A 152 GLGNGLVDIYDVESQTKLRTM-----AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGL 223 (401)
T ss_dssp EETTSCEEEEETTTCCEEEEE-----CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEE
T ss_pred ECCCCeEEEEECcCCeEEEEe-----cCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEE
Confidence 788999999999875433222 2567799999994 5789999999999999999543 344444 44 9999
Q ss_pred EcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEee--CCCeEEEEEcCCCCCCCCCC
Q 018697 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG--TDSTVNLWLVSTSNHDELPS 292 (351)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~ 292 (351)
+|+|++. ++++|+.|+.|++||+++ .+++..+..|...|.+++|+|++..++++++ .|+.|++||++.
T Consensus 224 ~~~~~~~-~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-------- 293 (401)
T 4aez_A 224 AWRSDGL-QLASGGNDNVVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-------- 293 (401)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT--------
T ss_pred EEcCCCC-EEEEEeCCCeEEEccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC--------
Confidence 9999998 899999999999999997 6678888899999999999998867888866 799999999998
Q ss_pred cccccCCcccccccceeeccccceEEEEEeCCCCCceEEE--eeeCCeEEEeecCc
Q 018697 293 ESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFAS--LSYDGRVVVESVKP 346 (351)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s--~~~dg~v~vw~~~~ 346 (351)
++++..+. +...|.+++|+|+++ .+++ |+.||.|++|+++.
T Consensus 294 -----------~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 294 -----------GARVNTVD-AGSQVTSLIWSPHSK-EIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp -----------CCEEEEEE-CSSCEEEEEECSSSS-EEEEEECTTTCEEEEEEEET
T ss_pred -----------CCEEEEEe-CCCcEEEEEECCCCC-eEEEEeecCCCcEEEEecCC
Confidence 77777775 556799999999999 6766 44899999999875
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=243.87 Aligned_cols=240 Identities=15% Similarity=0.172 Sum_probs=187.0
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee-----------------------------
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL----------------------------- 116 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~----------------------------- 116 (351)
.++.+++|+|+++.|+++ .++.|++||+.... ..+.+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-----~~~~i~v~d~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-----IKNCILSFKYQSPN------HWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENEN 73 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-----ETTEEEEEEEETTT------EEEEEEEEECCC-------------------------
T ss_pred ccEEEEEecCCCCEEEEE-----eCCeEEEEECCCCC------cceeeeecCCccccccccccccchhhccccccccccc
Confidence 478899999999966554 56789999987311 00022222
Q ss_pred -------------------------eccccceeEEEecCCCCCcEEEEecCCcEEEEEcC--CCCCCcccccccccCccc
Q 018697 117 -------------------------DAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLD--CSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 117 -------------------------~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~ 169 (351)
..|...|.+++|+|+++.++++++.|+.|++||+. ++.....+.. ..|..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~ 150 (450)
T 2vdu_B 74 KKLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR---FCFSK 150 (450)
T ss_dssp --------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE---EECSS
T ss_pred cccccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec---ccCCC
Confidence 23555799999999999644666789999999998 5443332221 12345
Q ss_pred ceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCc----eeecce---eEEEEcCCC---CCcEEEEecCCCeEEEEecc
Q 018697 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN----SIEHAH---VRNVDYDTK---KKHLLVTAADESGIHLWDLR 239 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~----~~~~~~---v~~~~~~~~---~~~~l~~~~~dg~i~i~d~~ 239 (351)
.+.+++|+|++++|++++.++.+++|++.+++... .+. +| |.+++|+|+ ++ +|++++.|+.|++||++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYP 228 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEES
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeee-cccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECC
Confidence 89999999999999999999999999998876543 333 33 999999999 87 89999999999999998
Q ss_pred cCCcceeE-eeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeec-------
Q 018697 240 MLKAPIQE-LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS------- 311 (351)
Q Consensus 240 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 311 (351)
. ...+.. +.+|...|.+++|+ ++ .+|++++.|+.|++||++. ++++..+.
T Consensus 229 ~-~~~~~~~~~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~-------------------~~~~~~~~~~~~~~~ 286 (450)
T 2vdu_B 229 Q-CFIVDKWLFGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKT-------------------GKNLSTFDYNSLIKP 286 (450)
T ss_dssp C-TTCEEEECCCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTT-------------------CCEEEEEECHHHHGG
T ss_pred C-CceeeeeecCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCC-------------------CcEeeeecchhhhhh
Confidence 7 555666 56899999999999 88 9999999999999999998 55444443
Q ss_pred ------------------cccceEEEEEeCCCCCceEEEee-eCCeEEEeec
Q 018697 312 ------------------DYEDSVYGLAWSSREPWIFASLS-YDGRVVVESV 344 (351)
Q Consensus 312 ------------------~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~ 344 (351)
.....|.+++|+|+++ ++++++ .|+.|++|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 287 YLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP-FVAFFVEATKCIIILEM 337 (450)
T ss_dssp GCCTTSBC----------CBCCCEEEEEECSSSS-EEEEEETTCSEEEEEEE
T ss_pred hhhhcccccccccccccccceEEEEEEEEeCCCC-EEEEEECCCCeEEEEEe
Confidence 2235689999999999 677777 8999999999
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.1e-32 Score=236.14 Aligned_cols=287 Identities=14% Similarity=0.189 Sum_probs=192.1
Q ss_pred ceeEeeeecCCC-CcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEee----------ecCCcceeeeeeCC-CCCceEE
Q 018697 15 QARCISDVKADT-DHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGL----------FSHPNEIWDLSSCP-FDQRIFS 82 (351)
Q Consensus 15 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~h~~~v~~i~~~~-~~~~l~~ 82 (351)
+...+..+.+++ +...++.|+ .++.|.+|++............ .+|...|.+++|+| ++..|++
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGG----SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEE----TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred cCCcEEEEEEecCCCCEEEEEc----CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 445677888888 888888775 5789999999875443222111 25999999999999 4555655
Q ss_pred EEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCC--cEEEEecCCcEEEEEcCCCCCCcccc
Q 018697 83 TVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRH--DKLVSIDEENIFLWSLDCSNKNAQVQ 160 (351)
Q Consensus 83 ~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--~~~~~~~d~~v~iwd~~~~~~~~~~~ 160 (351)
+ +.|+.|++||+. ..+....+. +...+.++.|+|.+.. ++++++.|+.|++||+.++.....+
T Consensus 118 ~----~~d~~i~iwd~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~- 182 (408)
T 4a11_B 118 S----SFDKTLKVWDTN---------TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL- 182 (408)
T ss_dssp E----ETTSEEEEEETT---------TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE-
T ss_pred E----eCCCeEEEeeCC---------CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee-
Confidence 4 689999999998 556666664 7888999999986532 4777788999999999875443322
Q ss_pred cccccCcccceeeeEECCCCCc-EEEeecCCeEEEEEcccCCc-Cceee--------------cce---eEEEEcCCCCC
Q 018697 161 SKQSSGMLHYLSGGAWDPHDVN-AVAATCESSVQFWDLRSMGK-TNSIE--------------HAH---VRNVDYDTKKK 221 (351)
Q Consensus 161 ~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~-~~~~~--------------~~~---v~~~~~~~~~~ 221 (351)
.+|...|.+++|+|+++. +++++.|+.|++||++++.. ...+. ..| |.+++|+|+++
T Consensus 183 ----~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 183 ----QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL 258 (408)
T ss_dssp ----CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS
T ss_pred ----cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC
Confidence 246679999999999996 77899999999999987652 22220 123 99999999998
Q ss_pred cEEEEecCCCeEEEEecccCC----------------------------------------------cceeEeeCCCCce
Q 018697 222 HLLVTAADESGIHLWDLRMLK----------------------------------------------APIQELPGHTHWT 255 (351)
Q Consensus 222 ~~l~~~~~dg~i~i~d~~~~~----------------------------------------------~~~~~~~~~~~~v 255 (351)
++++++.|+.|++||+++.. +++..+.+|...|
T Consensus 259 -~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v 337 (408)
T 4a11_B 259 -HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTV 337 (408)
T ss_dssp -EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCE
T ss_pred -EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeE
Confidence 79999999999999987522 3455667899999
Q ss_pred eEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeee
Q 018697 256 WAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY 335 (351)
Q Consensus 256 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 335 (351)
++++|+|++ .+|++++.||.|++||+.. .+++.....+.. ...+.+.....+.+.+.
T Consensus 338 ~~~~~s~~~-~~l~s~~~dg~i~iw~~~~-------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 394 (408)
T 4a11_B 338 DCCVFQSNF-QELYSGSRDCNILAWVPSL-------------------YEPVPDDDETTT---KSQLNPAFEDAWSSSDE 394 (408)
T ss_dssp EEEEEETTT-TEEEEEETTSCEEEEEECC---------------------------------------------------
T ss_pred EEEEEcCCC-CEEEEECCCCeEEEEeCCC-------------------CCccCCCCceEe---ccccccccceeecccCc
Confidence 999999999 9999999999999999998 555544433322 23344433336677888
Q ss_pred CCeEEEeecCccc
Q 018697 336 DGRVVVESVKPFL 348 (351)
Q Consensus 336 dg~v~vw~~~~~~ 348 (351)
|+.+++|+.+.+.
T Consensus 395 ~~~~~~W~~~~~~ 407 (408)
T 4a11_B 395 EGGTSAWSHPQFE 407 (408)
T ss_dssp -------------
T ss_pred cCceeecCCcccC
Confidence 9999999987653
No 104
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-31 Score=229.66 Aligned_cols=259 Identities=14% Similarity=0.213 Sum_probs=204.2
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCe-EEEEeeecCCcceeeeeeCC--CCCceEEEEeecCCcc
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTE-LICEGLFSHPNEIWDLSSCP--FDQRIFSTVFSTGESY 91 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~h~~~v~~i~~~~--~~~~l~~~~~~~~~d~ 91 (351)
+...|..+.++++...++.|. .++.|++|++...... .....+.+|...|.+++|+| ++..|+++ +.|+
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~----~~dg 81 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCS----SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASA----SYDK 81 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEE----TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEE----ETTS
T ss_pred cccceeEEEEcCCCCEEEEee----CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEE----cCCC
Confidence 345677888888888888874 6899999999875443 34466778999999999999 57777775 6899
Q ss_pred eEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcEEEEecCCcEEEEEcCCCCCCccccc--------
Q 018697 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQS-------- 161 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-------- 161 (351)
.|++||+............+.+..+..|...|.+++|+|+ +. ++++++.|+.|++||+.+.........
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 9999999842221112223667888899999999999999 77 366778899999999987654433221
Q ss_pred ccccCcccceeeeEECCC---CCcEEEeecCCeEEEEEcccCCc--Cceeecce---eEEEEcCCCCC---cEEEEecCC
Q 018697 162 KQSSGMLHYLSGGAWDPH---DVNAVAATCESSVQFWDLRSMGK--TNSIEHAH---VRNVDYDTKKK---HLLVTAADE 230 (351)
Q Consensus 162 ~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~---v~~~~~~~~~~---~~l~~~~~d 230 (351)
.....|...+.+++|+|+ +..+++++.++.+.+|+...++. ...+. .| |.+++|+|++. .+|++++.|
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 112256678999999997 88999999999998888776654 33333 34 99999999982 389999999
Q ss_pred CeEEEEecccCC---------------------------------------------cceeEeeCCCCceeEEEecCCCC
Q 018697 231 SGIHLWDLRMLK---------------------------------------------APIQELPGHTHWTWAVCCNPEYD 265 (351)
Q Consensus 231 g~i~i~d~~~~~---------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~ 265 (351)
|.|++||++... +++..+.+|...|++++|+|++
T Consensus 240 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~- 318 (351)
T 3f3f_A 240 GRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG- 318 (351)
T ss_dssp SCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS-
T ss_pred CeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC-
Confidence 999999998621 4566778899999999999999
Q ss_pred CeEEEeeCCCeEEEEEcCC
Q 018697 266 GFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 266 ~~l~s~~~dg~i~iwd~~~ 284 (351)
.+|++++.||.|++||+..
T Consensus 319 ~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 319 TILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp CCEEEEETTSCEEEEEECT
T ss_pred CEEEEecCCCcEEEEecCc
Confidence 9999999999999999987
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-33 Score=240.26 Aligned_cols=236 Identities=8% Similarity=-0.057 Sum_probs=180.9
Q ss_pred eeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEE
Q 018697 68 IWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFL 147 (351)
Q Consensus 68 v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~i 147 (351)
.....+.+++..++++ +.|+.|++||+. ..+.+..+. ...|.++.|+|+ +++++.|++|++
T Consensus 39 ~~~~~~~~d~~~l~sg----~~Dg~v~iwd~~---------~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~ 99 (343)
T 3lrv_A 39 ELNKSMYYDKWVCMCR----CEDGALHFTQLK---------DSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLL 99 (343)
T ss_dssp EECSSSSEEEEEEEEE----EETTEEEEEEES---------SSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEE
T ss_pred hhhhhhcCCCCEEEEE----CCCCcEEEEECC---------CCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEE
Confidence 3444566677777764 799999999998 456666664 567888888887 777789999999
Q ss_pred EEcCCCC-----CCcccccccccCcccceeeeEECC--CCCcEEEeecCCeEEEEEcccCCcCceeecce---eEEEEcC
Q 018697 148 WSLDCSN-----KNAQVQSKQSSGMLHYLSGGAWDP--HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYD 217 (351)
Q Consensus 148 wd~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~ 217 (351)
|+..... ...........+|...|.+++|+| +++++++++.|+.|++||+++++........+ +.+++|+
T Consensus 100 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~ 179 (343)
T 3lrv_A 100 LYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH 179 (343)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC
T ss_pred EEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC
Confidence 9876321 011112222234556899999999 99999999999999999999988755443232 9999999
Q ss_pred CCCCcEEEEecCCCeEEEEecccCCcce-eEeeC-CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCccc
Q 018697 218 TKKKHLLVTAADESGIHLWDLRMLKAPI-QELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESL 295 (351)
Q Consensus 218 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 295 (351)
|++. ++++|+.||.|++||+++ .+.+ ..+.. |..+|++++|+|++ .+|++++ |+.|++||++.
T Consensus 180 pdg~-~lasg~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~----------- 244 (343)
T 3lrv_A 180 KDSL-LLALYSPDGILDVYNLSS-PDQASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRK----------- 244 (343)
T ss_dssp TTSC-EEEEECTTSCEEEEESSC-TTSCCEECCCCTTSCEEEEEECTTS-SEEEEEE-SSBEEEEETTS-----------
T ss_pred CCCC-EEEEEcCCCEEEEEECCC-CCCCccEEeccCCCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCC-----------
Confidence 9998 899999999999999998 4444 77887 99999999999999 9999999 55999999998
Q ss_pred ccCCcccccccceeecc---ccceEE--EEEeCCCCCceEEEeee-CCeEEEeecCc
Q 018697 296 VESPNQRANSLLNSYSD---YEDSVY--GLAWSSREPWIFASLSY-DGRVVVESVKP 346 (351)
Q Consensus 296 ~~~~~~~~~~~~~~~~~---~~~~v~--~~~~~~~~~~~l~s~~~-dg~v~vw~~~~ 346 (351)
.+.+..+.. |...+. +++|+|+++ +|++++. |+.|++|++.+
T Consensus 245 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 245 --------DVGTLAYPTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp --------STTCBSSCCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEECT
T ss_pred --------CCcceeecccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEcc
Confidence 444433332 434444 599999999 7888887 99999999854
No 106
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-32 Score=239.62 Aligned_cols=299 Identities=10% Similarity=0.049 Sum_probs=192.9
Q ss_pred eeeccccce--eEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCC------eEEEEeeecCCcceeeeeeCC----
Q 018697 8 IGYGLKYQA--RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGT------ELICEGLFSHPNEIWDLSSCP---- 75 (351)
Q Consensus 8 ~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~h~~~v~~i~~~~---- 75 (351)
-.|.+.++. ..+.+....++...++... +++.|.+|.+..... .........+...+..+.|++
T Consensus 8 ~~~~lpl~~~p~~~~w~~~~~~~~~l~a~g----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (393)
T 4gq1_A 8 NQYQLPLNVRPYTTTWCSQSPSCSNLLAIG----HDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSY 83 (393)
T ss_dssp EEEECCTTCCEEEEEECTTSGGGTTEEEEE----ESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEE
T ss_pred CceEecCCCCCeEEEEeCCCCCCCCEEEEE----CCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccc
Confidence 345555543 4456666666666665532 467888887664321 112222334445555555443
Q ss_pred ----------------CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecC--------C
Q 018697 76 ----------------FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS--------S 131 (351)
Q Consensus 76 ----------------~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--------~ 131 (351)
++..|++ ++.|++|+|||+.... ......+..+.+|.+.|++++|+| +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~las----~~~d~~v~lw~~~~~~----~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d 155 (393)
T 4gq1_A 84 SENLHDGDGNVNSSPVYSLFLAC----VCQDNTVRLIITKNET----IITQHVLGGKSGHHNFVNDIDIADVYSADNRLA 155 (393)
T ss_dssp ECC----------CCEEEEEEEE----EETTSCEEEEEEETTE----EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEE
T ss_pred cccccCCCcceeecCCCCCEEEE----EeCCCcEEEEECCCCc----cceeeeecccCCCCCceEEEEEccccccccCCC
Confidence 3334444 4799999999987210 001123445789999999999998 5
Q ss_pred CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCC-cEEEeecCCeEEEEEcccCCcCceee---
Q 018697 132 GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDV-NAVAATCESSVQFWDLRSMGKTNSIE--- 207 (351)
Q Consensus 132 ~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~--- 207 (351)
++ ++++++.|++|+|||+.+........ +|...+.+++|+|++. +|++++.|+.|++||+++++......
T Consensus 156 ~~-~las~s~D~tv~~Wd~~~~~~~~~~~-----~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~ 229 (393)
T 4gq1_A 156 EQ-VIASVGDDCTLIIWRLTDEGPILAGY-----PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTE 229 (393)
T ss_dssp EE-EEEEEETTSEEEEEEEETTEEEEEEE-----ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---------
T ss_pred CC-EEEEEECCCeEEEEECCCCceeeeec-----CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccC
Confidence 55 36666999999999998654333322 3556899999999875 68889999999999998875432221
Q ss_pred ---------------------cce---eEEEEcC-CCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEe--
Q 018697 208 ---------------------HAH---VRNVDYD-TKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCC-- 260 (351)
Q Consensus 208 ---------------------~~~---v~~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~-- 260 (351)
.++ +.++.|+ |++. .+++++.|+++++||++. .+....+..|...+..+.+
T Consensus 230 ~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~ 307 (393)
T 4gq1_A 230 LVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLP 307 (393)
T ss_dssp -CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC--------------------CCSC
T ss_pred CcccceEEecccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEcc
Confidence 112 6778875 7887 899999999999999986 4444444444444433333
Q ss_pred ----------------cC-CCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeC
Q 018697 261 ----------------NP-EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS 323 (351)
Q Consensus 261 ----------------~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 323 (351)
+| .+..++++|+.|+.|++||+.. ++++..+..|..+|++++|+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~-------------------~~~~~~~~~~~~~V~svafs 368 (393)
T 4gq1_A 308 NVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYE-------------------KDSNSIPIQLGMPIVDFCWH 368 (393)
T ss_dssp SEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTC-------------------TTCCEEEEECSSCEEEEEEC
T ss_pred ccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCC-------------------CcEEEEecCCCCcEEEEEEc
Confidence 32 2325677888999999999998 77788888888999999999
Q ss_pred CCCCceEEEeeeCCeEEEeecCcc
Q 018697 324 SREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 324 ~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
|+|+ +||+++.|| +.+|.+..+
T Consensus 369 pdG~-~LA~as~~G-v~lvrL~gf 390 (393)
T 4gq1_A 369 QDGS-HLAIATEGS-VLLTRLMGF 390 (393)
T ss_dssp TTSS-EEEEEESSE-EEEEEEGGG
T ss_pred CCCC-EEEEEeCCC-eEEEEEeCc
Confidence 9999 899988655 666766543
No 107
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.9e-31 Score=236.62 Aligned_cols=253 Identities=17% Similarity=0.364 Sum_probs=210.4
Q ss_pred CCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec
Q 018697 39 KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA 118 (351)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 118 (351)
..++.|.+|++.... ....+.+|...|.+++|+ +..++++ +.|+.|++||+. ..+.+..+.+
T Consensus 176 ~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~----s~dg~i~~wd~~---------~~~~~~~~~~ 237 (445)
T 2ovr_B 176 STDRTLKVWNAETGE---CIHTLYGHTSTVRCMHLH--EKRVVSG----SRDATLRVWDIE---------TGQCLHVLMG 237 (445)
T ss_dssp ETTSCEEEEETTTTE---EEEEECCCSSCEEEEEEE--TTEEEEE----ETTSEEEEEESS---------SCCEEEEEEC
T ss_pred eCCCeEEEEECCcCc---EEEEECCCCCcEEEEEec--CCEEEEE----eCCCEEEEEECC---------CCcEEEEEcC
Confidence 467899999987642 345677899999999996 4556664 789999999998 5678888999
Q ss_pred cccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcc
Q 018697 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLR 198 (351)
Q Consensus 119 h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 198 (351)
|...|.+++| ++. .+++++.|+.|++||+.++..... ..+|...+.+++| ++..+++++.|+.|++||++
T Consensus 238 ~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~~~~~~-----~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 238 HVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETETCLHT-----LQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp CSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGTEEEEE-----ECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT
T ss_pred CcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCCcEeEE-----ecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC
Confidence 9999999999 455 377778999999999986433222 2356678999999 68899999999999999999
Q ss_pred cCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC---CCCceeEEEecCCCCCeEEEee
Q 018697 199 SMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 199 ~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~ 272 (351)
+++.+..+. .| +.++.++ +. ++++|+.||.|++||+++ .+++..+.. |...|.+++|+ + .+|++++
T Consensus 308 ~~~~~~~~~-~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~s~~ 379 (445)
T 2ovr_B 308 TGNCIHTLT-GHQSLTSGMELK--DN-ILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--K-NFVITSS 379 (445)
T ss_dssp TCCEEEEEC-CCCSCEEEEEEE--TT-EEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--S-SEEEEEE
T ss_pred CCCEEEEEc-CCcccEEEEEEe--CC-EEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--C-CEEEEEe
Confidence 998877776 34 7777774 44 799999999999999987 667888876 88899999996 3 7999999
Q ss_pred CCCeEEEEEcCCCCCCCCCCcccccCCcccccccceee-----ccccceEEEEEeCCCCCceEEEeeeCCe----EEEee
Q 018697 273 TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY-----SDYEDSVYGLAWSSREPWIFASLSYDGR----VVVES 343 (351)
Q Consensus 273 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~s~~~dg~----v~vw~ 343 (351)
.||.|++||+.+ ++.+..+ ..|...|++++|+|++. ++++++.||. |.+||
T Consensus 380 ~dg~v~iwd~~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 380 DDGTVKLWDLKT-------------------GEFIRNLVTLESGGSGGVVWRIRASNTKL-VCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp TTSEEEEEETTT-------------------CCEEEEEEECTTGGGTCEEEEEEECSSEE-EEEEECSSSSSCCEEEEEE
T ss_pred CCCeEEEEECCC-------------------CceeeeeeccccCCCCceEEEEEecCCEE-EEEEcccCCCCccEEEEEE
Confidence 999999999998 7777776 46888999999999988 8999999997 99999
Q ss_pred cCcc
Q 018697 344 VKPF 347 (351)
Q Consensus 344 ~~~~ 347 (351)
++..
T Consensus 440 f~~~ 443 (445)
T 2ovr_B 440 FDVD 443 (445)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9764
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.3e-31 Score=235.03 Aligned_cols=258 Identities=18% Similarity=0.341 Sum_probs=214.7
Q ss_pred CcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCC
Q 018697 27 DHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLN 106 (351)
Q Consensus 27 ~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~ 106 (351)
++..++.|+ .++.|++|++.... ....+.+|.+.|.+++|+ +..++++ +.|+.|++||+.
T Consensus 128 ~g~~l~sg~----~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~----~~dg~i~vwd~~------- 187 (445)
T 2ovr_B 128 CGNRIVSGS----DDNTLKVWSAVTGK---CLRTLVGHTGGVWSSQMR--DNIIISG----STDRTLKVWNAE------- 187 (445)
T ss_dssp ETTEEEEEE----TTSCEEEEETTTCC---EEEECCCCSSCEEEEEEE--TTEEEEE----ETTSCEEEEETT-------
T ss_pred cCCEEEEEE----CCCcEEEEECCCCc---EEEEEcCCCCCEEEEEec--CCEEEEE----eCCCeEEEEECC-------
Confidence 345566553 68999999987643 345677999999999997 4466664 799999999998
Q ss_pred CCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEe
Q 018697 107 SPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (351)
Q Consensus 107 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (351)
+.+.+..+.+|...|.++.|++ . .+++++.|+.|++||+.++..... ..+|...+.+++| +++.++++
T Consensus 188 --~~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~~~~~~~-----~~~~~~~v~~~~~--~~~~l~~~ 255 (445)
T 2ovr_B 188 --TGECIHTLYGHTSTVRCMHLHE--K-RVVSGSRDATLRVWDIETGQCLHV-----LMGHVAAVRCVQY--DGRRVVSG 255 (445)
T ss_dssp --TTEEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEESSSCCEEEE-----EECCSSCEEEEEE--CSSCEEEE
T ss_pred --cCcEEEEECCCCCcEEEEEecC--C-EEEEEeCCCEEEEEECCCCcEEEE-----EcCCcccEEEEEE--CCCEEEEE
Confidence 6788889999999999999964 3 377778999999999987543322 2356678999999 67899999
Q ss_pred ecCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCC
Q 018697 187 TCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPE 263 (351)
Q Consensus 187 ~~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (351)
+.|+.|++||+++++.+..+. .| +.+++| ++. .+++++.|+.|++||+++ .+++..+.+|...+.++.++
T Consensus 256 ~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~-- 328 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELK-- 328 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEEEC-CCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEEE--
T ss_pred cCCCEEEEEECCCCcEeEEec-CCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCC-CCEEEEEcCCcccEEEEEEe--
Confidence 999999999999988877776 34 999999 566 799999999999999998 66888999999999988875
Q ss_pred CCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc---ccceEEEEEeCCCCCceEEEeeeCCeEE
Q 018697 264 YDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD---YEDSVYGLAWSSREPWIFASLSYDGRVV 340 (351)
Q Consensus 264 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 340 (351)
+ .++++++.||.|++||++. ++++..+.. |...|.+++|++ . ++++++.||.|+
T Consensus 329 ~-~~l~~~~~dg~i~vwd~~~-------------------~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~s~~~dg~v~ 385 (445)
T 2ovr_B 329 D-NILVSGNADSTVKIWDIKT-------------------GQCLQTLQGPNKHQSAVTCLQFNK--N-FVITSSDDGTVK 385 (445)
T ss_dssp T-TEEEEEETTSCEEEEETTT-------------------CCEEEEECSTTSCSSCEEEEEECS--S-EEEEEETTSEEE
T ss_pred C-CEEEEEeCCCeEEEEECCC-------------------CcEEEEEccCCCCCCCEEEEEECC--C-EEEEEeCCCeEE
Confidence 4 7999999999999999998 777777765 888999999964 4 899999999999
Q ss_pred EeecCc
Q 018697 341 VESVKP 346 (351)
Q Consensus 341 vw~~~~ 346 (351)
+||+.+
T Consensus 386 iwd~~~ 391 (445)
T 2ovr_B 386 LWDLKT 391 (445)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999875
No 109
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.1e-31 Score=219.26 Aligned_cols=268 Identities=9% Similarity=0.051 Sum_probs=190.1
Q ss_pred CCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecc
Q 018697 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (351)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h 119 (351)
.+..+.+|+..+.-..........|+.+|..+.+.|+...|++++. |.=..-.++.+.-. .+...........+|
T Consensus 61 ~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~v~sla~s---pd~~~~~~~l~s~g~ 135 (356)
T 2w18_A 61 CEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL--GNLEIREIRALFCS---SDDESEKQVLLKSGN 135 (356)
T ss_dssp ESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE--CSSSEEEEEEECC---------CCEEEEEEEE
T ss_pred ccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeee--ccccccceEEEEEC---CCccccccEEEeCCC
Confidence 4678889998886444556778899999999999999888887753 22222223333210 000011222222456
Q ss_pred ccceeEEEecCCCCCcEEEEe---cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECC---CCCcEEEeecCCeEE
Q 018697 120 VGKINCVLWWSSGRHDKLVSI---DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP---HDVNAVAATCESSVQ 193 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~ 193 (351)
...|..+ ++++ ++.++ .|+.|++|++....+.... ...|...+..++|+| ++..|++++.|++|+
T Consensus 136 ~~~v~~l---~~g~--lv~ss~~g~d~~V~~~~~s~dG~~~~s----~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIk 206 (356)
T 2w18_A 136 IKAVLGL---TKRR--LVSSSGTLSDQQVEVMTFAEDGGGKEN----QFLMPPEETILTFAEVQGMQEALLGTTIMNNIV 206 (356)
T ss_dssp EEEEEEE---TTTE--EEEEESSSTTCEEEEEEECTTSCEEEE----EEECCCSSCEEEEEEEETSTTEEEEEETTSEEE
T ss_pred eEEEEec---CCCc--EEEecccCCCCcEEEEEECCCCceeee----eccCCCceeeEEeeccCCCCceEEEecCCCcEE
Confidence 6666665 5555 55553 4999999999653332221 124556888899998 778999999999999
Q ss_pred EEEcccCCcCceeecce-----eEEEEcCCCCCcE-----------EEEecCCCeEEEEecccCCcceeEe-----eCCC
Q 018697 194 FWDLRSMGKTNSIEHAH-----VRNVDYDTKKKHL-----------LVTAADESGIHLWDLRMLKAPIQEL-----PGHT 252 (351)
Q Consensus 194 iwd~~~~~~~~~~~~~~-----v~~~~~~~~~~~~-----------l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~ 252 (351)
+||+++++.+.++...+ +.+++|+|++..+ +++|+.|++|++||..+ ++.+..+ .+|.
T Consensus 207 IWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~ 285 (356)
T 2w18_A 207 IWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT-TLSVGVMLYCLPPGQA 285 (356)
T ss_dssp EEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT-TEEEEEEEECCCTTCC
T ss_pred EEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC-CEEEEEEEeeccCCCc
Confidence 99999999998887332 7788999999732 26688899999999987 6555554 3666
Q ss_pred CceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEE-EEEeCCCCCceEE
Q 018697 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVY-GLAWSSREPWIFA 331 (351)
Q Consensus 253 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~ 331 (351)
..+.+..++ + .++++++.|++|+|||+.+ ++++.++.+|...+. .++|+|+|+ +|+
T Consensus 286 ~~~lsg~~s--g-~~lASgS~DgTIkIWDl~t-------------------Gk~l~tL~gH~~~vvs~vafSPDG~-~La 342 (356)
T 2w18_A 286 GRFLEGDVK--D-HCAAAILTSGTIAIWDLLL-------------------GQCTALLPPVSDQHWSFVKWSGTDS-HLL 342 (356)
T ss_dssp CCEEEEEEE--T-TEEEEEETTSCEEEEETTT-------------------CSEEEEECCC--CCCCEEEECSSSS-EEE
T ss_pred ceeEccccC--C-CEEEEEcCCCcEEEEECCC-------------------CcEEEEecCCCCCeEEEEEECCCCC-EEE
Confidence 555544444 5 7999999999999999999 999999999987665 589999999 899
Q ss_pred EeeeCCeEEEeecC
Q 018697 332 SLSYDGRVVVESVK 345 (351)
Q Consensus 332 s~~~dg~v~vw~~~ 345 (351)
+|+.|++|+|||+.
T Consensus 343 SGS~D~TIklWd~~ 356 (356)
T 2w18_A 343 AGQKDGNIFVYHYS 356 (356)
T ss_dssp EECTTSCEEEEEEC
T ss_pred EEECCCcEEEecCC
Confidence 99999999999963
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.6e-32 Score=232.63 Aligned_cols=252 Identities=15% Similarity=0.200 Sum_probs=197.4
Q ss_pred EEEeeecCCcceeeeeeCCCC---CceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCC
Q 018697 57 ICEGLFSHPNEIWDLSSCPFD---QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGR 133 (351)
Q Consensus 57 ~~~~~~~h~~~v~~i~~~~~~---~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 133 (351)
....+.+|.+.|.+++|+|++ +.|+++ +.|+.|++|++.. ........+.+|...|.+++|+|+++
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~----~~dg~i~iw~~~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAG----SWANDVRCWEVQD-------SGQTIPKAQQMHTGPVLDVCWSDDGS 99 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEE----ETTSEEEEEEECT-------TSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEE----CCCCcEEEEEcCC-------CCceeEEEeccccCCEEEEEECcCCC
Confidence 345677899999999999994 677664 7899999999982 12233377889999999999999998
Q ss_pred CcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEE--CCCCCcEEEeecCCeEEEEEcccCCcCceeecce-
Q 018697 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW--DPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH- 210 (351)
Q Consensus 134 ~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~- 210 (351)
. +++++.|+.|++||+.++.... ...|...|.+++| +|++..+++++.|+.|++||+++++.+..+....
T Consensus 100 ~-l~s~~~dg~v~iwd~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 172 (368)
T 3mmy_A 100 K-VFTASCDKTAKMWDLSSNQAIQ------IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER 172 (368)
T ss_dssp E-EEEEETTSEEEEEETTTTEEEE------EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC
T ss_pred E-EEEEcCCCcEEEEEcCCCCcee------eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC
Confidence 4 6677889999999998653222 2246679999999 9999999999999999999999998888887444
Q ss_pred eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee-CCCCceeEEEecCCCCCe----EEEeeCCCeEEEEEcCCC
Q 018697 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCNPEYDGF----ILSAGTDSTVNLWLVSTS 285 (351)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~----l~s~~~dg~i~iwd~~~~ 285 (351)
+.++.+.+. .+++++.++.+++|+++........+. .+...+.++.+.++. .. +++++.|+.|++||++..
T Consensus 173 ~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 173 CYCADVIYP---MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDK-QNKPTGFALGSIEGRVAIHYINPP 248 (368)
T ss_dssp EEEEEEETT---EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECT-TSCEEEEEEEETTSEEEEEESSCS
T ss_pred ceEEEecCC---eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccC-CCCCCeEEEecCCCcEEEEecCCC
Confidence 777777653 577788899999999987444333332 234556666666555 43 999999999999999871
Q ss_pred CCCCCCCcccccCCcccccccceeeccccc------------eEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 286 NHDELPSESLVESPNQRANSLLNSYSDYED------------SVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
.. ...+..+..|.. .|++++|+|+++ +|++++.||.|++||+.+.
T Consensus 249 ~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 249 NP----------------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp CH----------------HHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTTT
T ss_pred Cc----------------cccceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCCC
Confidence 10 145666666665 799999999998 8999999999999999853
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.8e-31 Score=235.85 Aligned_cols=278 Identities=12% Similarity=0.084 Sum_probs=214.1
Q ss_pred ecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEE--eeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcc
Q 018697 22 VKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICE--GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIP 99 (351)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~ 99 (351)
+.+++ ..+++++. ..++.|++|++.......... .+.+|.+.|.+++|+|++..++++ +.|+.|++||+.
T Consensus 128 ~~~s~-~~~~~~~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~----~~d~~v~~~d~~ 199 (433)
T 3bws_A 128 VRFID-NTRLAIPL---LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQ----MQANAVHVFDLK 199 (433)
T ss_dssp CEESS-SSEEEEEB---TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEE----GGGTEEEEEETT
T ss_pred EEEeC-CCeEEEEe---CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEE----CCCCEEEEEECC
Confidence 34555 33444332 345779999877543211000 345788999999999988777664 789999999998
Q ss_pred cccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCC
Q 018697 100 ELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH 179 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 179 (351)
..+.+..+..|...+.+++|+|+++.++++++.|+.|++||+.++.....+.. ...+.+++|+|+
T Consensus 200 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~ 264 (433)
T 3bws_A 200 ---------TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK------IGLPRGLLLSKD 264 (433)
T ss_dssp ---------TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC------CSEEEEEEECTT
T ss_pred ---------CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC------CCCceEEEEcCC
Confidence 56777888889999999999999996444556799999999986533222211 226899999999
Q ss_pred CCcEEEee--------cCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC
Q 018697 180 DVNAVAAT--------CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250 (351)
Q Consensus 180 ~~~l~~~~--------~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 250 (351)
++.+++++ .|+.|++||+++++....+.... +.+++|+|+++.++++++.++.|++||+++ .+.+..+.
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~- 342 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP- 342 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-
Confidence 99999887 48899999999887766654334 899999999986778889999999999986 65666665
Q ss_pred CCCceeEEEecCCCCCeEEEeeC---------------CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccc
Q 018697 251 HTHWTWAVCCNPEYDGFILSAGT---------------DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYED 315 (351)
Q Consensus 251 ~~~~v~~~~~~~~~~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (351)
+...+.+++|+|++ .++++++. ||.|++||..+ ++.+..+..+ .
T Consensus 343 ~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-------------------~~~~~~~~~~-~ 401 (433)
T 3bws_A 343 VFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-------------------DTVKEFWEAG-N 401 (433)
T ss_dssp CSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT-------------------TEEEEEEECS-S
T ss_pred CCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEEECCC-------------------CcEEEEecCC-C
Confidence 67889999999999 77777765 57999999988 7777777664 4
Q ss_pred eEEEEEeCCCCCceEEEee-eCCeEEEeecCc
Q 018697 316 SVYGLAWSSREPWIFASLS-YDGRVVVESVKP 346 (351)
Q Consensus 316 ~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~~ 346 (351)
.+.+++|+|+++ +|++++ .|+.|++|+++.
T Consensus 402 ~~~~~~~s~dg~-~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 402 QPTGLDVSPDNR-YLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SEEEEEECTTSC-EEEEEETTTTEEEEEEETT
T ss_pred CCceEEEcCCCC-EEEEEECCCCeEEEEEecC
Confidence 689999999999 566555 599999999875
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=9.5e-31 Score=224.97 Aligned_cols=290 Identities=11% Similarity=0.085 Sum_probs=203.0
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~ 94 (351)
....+..+.+++++..++.|. ++.+++|++.+.. .... .+...+..+++.++++.++.+ ++.|++|+
T Consensus 18 h~~~V~~v~fs~dg~~la~g~-----~~~~~iw~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~d~~v~ 84 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQSCLILST-----LKSFEIYNVHPVA--HIMS---QEMRHLSKVRMLHRTNYVAFV---TGVKEVVH 84 (355)
T ss_dssp -CCCCCEEEECTTSSEEEEEC-----SSEEEEEEETTEE--EEEE---EECSCCCEEEECTTSSEEEEE---CSSTTEEE
T ss_pred CCCceEEEEECCCCCEEEEEc-----CCEEEEEecCCcc--eeee---eecCCeEEEEEcCCCCEEEEE---ECCccEEE
Confidence 345677788999999888874 3457888877532 1111 222357888899888887665 57889999
Q ss_pred EEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCC-CCCcccccccccCcccceee
Q 018697 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCS-NKNAQVQSKQSSGMLHYLSG 173 (351)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~v~~ 173 (351)
+||+. +.+.+..+. |...|.+++|+++. +++ +.|+.|++||+.+. .....+.. +...
T Consensus 85 iWd~~---------~~~~~~~~~-~~~~v~~v~~~~~~---~~~-~~~~~i~i~d~~~~~~~~~~~~~--------~~~~ 142 (355)
T 3vu4_A 85 IWDDV---------KKQDVSRIK-VDAPVKDLFLSREF---IVV-SYGDVISVFKFGNPWKRITDDIR--------FGGV 142 (355)
T ss_dssp EEETT---------TTEEEEEEE-CSSCEEEEEECSSE---EEE-EETTEEEEEESSTTCCBSSCCEE--------EEEE
T ss_pred EEECC---------CCcEEEEEE-CCCceEEEEEcCCE---EEE-EEcCEEEEEECCCCceeeEEecc--------CCce
Confidence 99988 567777775 67799999999863 233 34789999999975 33222221 2334
Q ss_pred eEECCCCCcEEE--eecCCeEEEEEcccCC----------------cCceeecce---eEEEEcCCCCCcEEEEecCCCe
Q 018697 174 GAWDPHDVNAVA--ATCESSVQFWDLRSMG----------------KTNSIEHAH---VRNVDYDTKKKHLLVTAADESG 232 (351)
Q Consensus 174 ~~~~~~~~~l~~--~~~d~~i~iwd~~~~~----------------~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~ 232 (351)
+++++ ..+++ ++.+|.|++||++++. ....+. +| |.+++|+|++. +|++|+.|++
T Consensus 143 ~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~~~v~~~~~s~~g~-~l~s~s~d~~ 218 (355)
T 3vu4_A 143 CEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHTNPIKMVRLNRKSD-MVATCSQDGT 218 (355)
T ss_dssp EEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEEC-CCSSCEEEEEECTTSS-EEEEEETTCS
T ss_pred EEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccCCceEEEEECCCCC-EEEEEeCCCC
Confidence 45666 55665 5789999999999765 134444 55 99999999998 8999999998
Q ss_pred -EEEEecccCCcceeEee-C-CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcc-cccccce
Q 018697 233 -IHLWDLRMLKAPIQELP-G-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQ-RANSLLN 308 (351)
Q Consensus 233 -i~i~d~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 308 (351)
|++||+++ ++++..+. + |...|.+++|+|++ .+|++++.|++|++||++.........-.....+.. .......
T Consensus 219 ~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 219 IIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp EEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred EEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 99999997 66788888 5 99999999999999 999999999999999998632211100000000000 0000000
Q ss_pred --ee-ccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 309 --SY-SDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 309 --~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
.+ ..+......++|+++++ .+++++.||.+++|++.+
T Consensus 297 ~~~~~~~~~~~~~~~a~~~d~~-~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWISESS-LVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEECCCCTTCCCCEEEESSSSE-EEEEETTTTEEEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeCCCC-EEEEEeCCCeEEEEEEEc
Confidence 11 11222346699999998 899999999999999865
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-32 Score=258.29 Aligned_cols=242 Identities=10% Similarity=0.073 Sum_probs=190.8
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 138 (351)
....+|.+.|.+++|+|+++.|+++ +.|+.|+||+.. ..+....+ .|...|.+++|+| ++ ++++
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsg----s~Dg~I~lw~~~---------~~~~~~~~-~~~~~V~~l~fsp-g~-~L~S 74 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIA----TVTGEVHIYGQQ---------QVEVVIKL-EDRSAIKEMRFVK-GI-YLVV 74 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEE----ETTSEEEEECST---------TCEEEEEC-SSCCCEEEEEEET-TT-EEEE
T ss_pred ccccCCCCCcEEEEECCCCCEEEEE----eCCCEEEEEeCC---------CcEEEEEc-CCCCCEEEEEEcC-CC-EEEE
Confidence 4456899999999999999888875 799999999987 44444444 5788999999999 66 4777
Q ss_pred EecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCc----------eeec
Q 018697 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN----------SIEH 208 (351)
Q Consensus 139 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~----------~~~~ 208 (351)
++.|++|++||+.++.....+. |...|++++|+|+++++++++.||.|++||+++++... ....
T Consensus 75 ~s~D~~v~lWd~~~~~~~~~~~------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 75 INAKDTVYVLSLYSQKVLTTVF------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp EETTCEEEEEETTTCSEEEEEE------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred EECcCeEEEEECCCCcEEEEEc------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 7899999999998754333221 33489999999999999999999999999999876420 0112
Q ss_pred ce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC------------------CCceeEEEecCCCCCe
Q 018697 209 AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH------------------THWTWAVCCNPEYDGF 267 (351)
Q Consensus 209 ~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~ 267 (351)
+| |.+++|+|++..++++|+.|+.| +||++. .+++..+..| ...|++++|+|+| .+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~ 225 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LH 225 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CE
Confidence 34 99999999764489999999999 999997 6677777655 5779999999999 99
Q ss_pred EEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccccccee--e---c-------------cccceEEEEEeC----CC
Q 018697 268 ILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNS--Y---S-------------DYEDSVYGLAWS----SR 325 (351)
Q Consensus 268 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~-------------~~~~~v~~~~~~----~~ 325 (351)
|++++.|+.|++||++. ++++.. + . .|...|++++|+ |+
T Consensus 226 lasgs~Dg~i~lWd~~~-------------------g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd 286 (902)
T 2oaj_A 226 IITIHEDNSLVFWDANS-------------------GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPE 286 (902)
T ss_dssp EEEEETTCCEEEEETTT-------------------CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTT
T ss_pred EEEEECCCeEEEEECCC-------------------CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCC
Confidence 99999999999999987 443321 1 1 245579999995 55
Q ss_pred CCceEEEeeeC-----CeEEEeec
Q 018697 326 EPWIFASLSYD-----GRVVVESV 344 (351)
Q Consensus 326 ~~~~l~s~~~d-----g~v~vw~~ 344 (351)
+..++++++.| ..+.+|++
T Consensus 287 ~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 287 YTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CCEEEEeCCCCCCCCCceEEEEec
Confidence 44478888766 37888885
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-31 Score=230.71 Aligned_cols=250 Identities=16% Similarity=0.301 Sum_probs=198.6
Q ss_pred ccceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCC--CCceEEEEeecCCc
Q 018697 13 KYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF--DQRIFSTVFSTGES 90 (351)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~--~~~l~~~~~~~~~d 90 (351)
+.+...|..+.++++...++.|. .++.|++|++..... .....+.+|...|.+++|+|+ +..|+++ +.|
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~----~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~----~~d 78 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASC----SYD 78 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEE----TTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECCGGGCSEEEEE----ETT
T ss_pred cCCcccEEEEEEcCCCCEEEEEE----CCCcEEEEecCCCcc-eeeeEecCCCCcEEEEEeCCCCCCCEEEEe----ccC
Confidence 33456678888899998888874 578999999985433 334567789999999999987 7777775 689
Q ss_pred ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcc
Q 018697 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (351)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 168 (351)
+.|++||+.. .....+..+..|...|.+++|+|+ +. ++++++.|+.|++||+.......... ...|.
T Consensus 79 g~v~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~ 147 (379)
T 3jrp_A 79 GKVLIWKEEN-------GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPII---IDAHA 147 (379)
T ss_dssp SCEEEEEEET-------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCEEE---EECCT
T ss_pred CEEEEEEcCC-------CceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceeeEE---ecCCC
Confidence 9999999982 223377788889999999999999 66 47777899999999998754333222 23566
Q ss_pred cceeeeEECC-------------CCCcEEEeecCCeEEEEEcccCCcCceee---cce---eEEEEcCCC---CCcEEEE
Q 018697 169 HYLSGGAWDP-------------HDVNAVAATCESSVQFWDLRSMGKTNSIE---HAH---VRNVDYDTK---KKHLLVT 226 (351)
Q Consensus 169 ~~v~~~~~~~-------------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~---v~~~~~~~~---~~~~l~~ 226 (351)
..|.+++|+| ++..+++++.|+.|++||++++....... ..| |.+++|+|+ +. +|++
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s 226 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLAS 226 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEE
Confidence 7899999999 68999999999999999999776432221 233 999999999 66 8999
Q ss_pred ecCCCeEEEEecccCCcc----eeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 227 AADESGIHLWDLRMLKAP----IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
++.||.|++||++....+ +.....|...|.+++|+|++ .+|++++.||.|++|++..
T Consensus 227 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 227 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEESSSSEEEEEEEE
T ss_pred EeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC-CEEEEecCCCcEEEEeCCC
Confidence 999999999999874321 22223488899999999999 9999999999999999974
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-31 Score=225.91 Aligned_cols=270 Identities=12% Similarity=0.079 Sum_probs=191.7
Q ss_pred CCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCC
Q 018697 26 TDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL 105 (351)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~ 105 (351)
.+...++.|. .++.|++|++......... . ...|.++.|+|+ +++ ++.|++|++|+........
T Consensus 46 ~d~~~l~sg~----~Dg~v~iwd~~~~~~~~~~---~--~~~v~~~~~~~~---~~s----~s~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 46 YDKWVCMCRC----EDGALHFTQLKDSKTITTI---T--TPNPRTGGEHPA---IIS----RGPCNRLLLLYPGNQITIL 109 (343)
T ss_dssp EEEEEEEEEE----ETTEEEEEEESSSSCEEEE---E--EECCCTTCCCCS---EEE----ECSTTEEEEEETTTEEEEE
T ss_pred CCCCEEEEEC----CCCcEEEEECCCCcEEEEE---e--cCCceeeeeCCc---eEE----ecCCCeEEEEEccCceEEe
Confidence 3455566654 5899999999875432221 1 567889999997 555 4899999999876211000
Q ss_pred CCCcceeeeee-eccccceeEEEecC--CCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCc
Q 018697 106 NSPQLERIAAL-DAHVGKINCVLWWS--SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182 (351)
Q Consensus 106 ~~~~~~~~~~~-~~h~~~v~~~~~~~--~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 182 (351)
+....+.+..+ ..|.++|.+++|+| ++.. +++++.|+.|++||+.++... .... ..+...+.+++|+|++.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~-~~~~---~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQY-IVHS---AKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCEE-EEEC---CCSSCCCCEEEECTTSCE
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcEE-EEEe---cCCCCceEEEEECCCCCE
Confidence 00122223333 26778999999999 8883 666789999999999975442 1111 123447999999999999
Q ss_pred EEEeecCCeEEEEEcccCCcC-ceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC---CCCce
Q 018697 183 AVAATCESSVQFWDLRSMGKT-NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG---HTHWT 255 (351)
Q Consensus 183 l~~~~~d~~i~iwd~~~~~~~-~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v 255 (351)
+++|+.|+.|++||+++++.. ..+...| |.+++|+|++. +|++++. +.|++||+++ .+.+..+.. |...+
T Consensus 185 lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~~-~~v~iwd~~~-~~~~~~~~~~~~~~~~~ 261 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVECD-QTVVCFDLRK-DVGTLAYPTYTIPEFKT 261 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEES-SBEEEEETTS-STTCBSSCCCBC-----
T ss_pred EEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEeC-CeEEEEEcCC-CCcceeecccccccccc
Confidence 999999999999999999877 5666425 99999999998 7888884 4999999997 444444332 44455
Q ss_pred e--EEEecCCCCCeEEEeeC-CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCC---CCCce
Q 018697 256 W--AVCCNPEYDGFILSAGT-DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS---REPWI 329 (351)
Q Consensus 256 ~--~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~ 329 (351)
. +++|+|++ .+|++++. |+.|++|++.. ....... .++..+.|.+ +.. .
T Consensus 262 ~~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~-------------------~~~~~~~----~~~~~~~~~~~~~~~~-~ 316 (343)
T 3lrv_A 262 GTVTYDIDDSG-KNMIAYSNESNSLTIYKFDK-------------------KTKNWTK----DEESALCLQSDTADFT-D 316 (343)
T ss_dssp CCEEEEECTTS-SEEEEEETTTTEEEEEEECT-------------------TTCSEEE----EEEEECCC----CCCC-E
T ss_pred cceEEEECCCC-CEEEEecCCCCcEEEEEEcc-------------------cccceEe----cCceeEecCccccccc-e
Confidence 4 59999999 99999888 99999999976 2222222 4678888988 777 7
Q ss_pred EEEeeeCCeEEEeec
Q 018697 330 FASLSYDGRVVVESV 344 (351)
Q Consensus 330 l~s~~~dg~v~vw~~ 344 (351)
+++++.|+.+.++-.
T Consensus 317 l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 317 MDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred eEEEecCCceEEEEe
Confidence 888888999888753
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-32 Score=238.52 Aligned_cols=264 Identities=9% Similarity=0.027 Sum_probs=197.1
Q ss_pred eEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEE
Q 018697 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIW 96 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw 96 (351)
.++..+.++||+..++.+. .+..|+ + +... +.+.+|+..|++++|+|+| .++.+.+|
T Consensus 16 ~~v~sv~~SpDG~~iASas----~D~TV~--d--~~~~----~~l~gh~~~v~~V~FsPdg-----------~~~~~~~~ 72 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTF----PDISIG--Q--PKYA----KDINCNSKNLFHVKEFPLE-----------FENKLDFE 72 (588)
T ss_dssp SSSCCEEECTTSCEEEECS----SSEEEE--E--ECCC----SCCSSBGGGTEEEEEECCC-----------CCCTTTTS
T ss_pred ccEEEEEECCCCCEEEEEc----CCceee--c--cccc----ceecCCCccEEEEEECCCC-----------CcceEEEE
Confidence 3566788999999888763 466665 3 1111 2336899999999999987 35555556
Q ss_pred EcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEE
Q 018697 97 QIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW 176 (351)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 176 (351)
+.. ......+ .|...|.+++|+|+|.. +++++.||.|++||... ..........-....+.+++|
T Consensus 73 ~~~----------~~~~~~~-~~~~~V~~vawSPdG~~-LAs~s~dg~V~iwd~~~---~l~~l~~~~~~~~~sv~svaf 137 (588)
T 2j04_A 73 LAQ----------QNGLLNS-QPVCYPRVCKPSPIDDW-MAVLSNNGNVSVFKDNK---MLTNLDSKGNLSSRTYHCFEW 137 (588)
T ss_dssp CCC----------SSCSSTT-SCSCCEEEEEECSSSSC-EEEEETTSCEEEEETTE---EEEECCCSSCSTTTCEEEEEE
T ss_pred eCC----------CceEeec-CCCCcEEEEEECCCCCE-EEEEeCCCcEEEEeCCc---eeeeccCCCccccccEEEEEE
Confidence 543 1222233 45789999999999995 66778999999999653 111111110000225999999
Q ss_pred CCCCCcEEEeecCCeEEEEEcccCCc-------Cceee---cce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCc
Q 018697 177 DPHDVNAVAATCESSVQFWDLRSMGK-------TNSIE---HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243 (351)
Q Consensus 177 ~~~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~---~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 243 (351)
+|+|++|++++.||+|++||+.++.. +.++. .+| |.+++|+|+| +++++.|++|++||+.....
T Consensus 138 SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 138 NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSS
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCcc
Confidence 99999999999999999999998753 34442 344 9999999998 67788899999999986331
Q ss_pred --ceeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEE
Q 018697 244 --PIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (351)
Q Consensus 244 --~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (351)
..+++ .+|...|.+++|+ + ..||+++ +++|++||+.. ........+|...|.++
T Consensus 215 ~~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~-------------------~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 215 QPVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKN-------------------YSISSLKTGSLENFHII 271 (588)
T ss_dssp CCCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTT-------------------TEEEEEECSCCSCCCEE
T ss_pred ccceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCC-------------------CeEEEEEcCCCceEEEE
Confidence 23456 4788999999999 5 7888887 69999999987 55533333799999999
Q ss_pred Ee--CCCCCceEEEeeeCCeEEEeecCc
Q 018697 321 AW--SSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 321 ~~--~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+| +|++. .+++++.||. ++|..+.
T Consensus 272 a~~~s~d~~-~La~a~edG~-klw~~d~ 297 (588)
T 2j04_A 272 PLNHEKEST-ILLMSNKTSY-KVLLEDE 297 (588)
T ss_dssp EETTCSSCE-EEEECSSCEE-EEEESSS
T ss_pred EeeeCCCCC-EEEEEcCCCC-EEEeecc
Confidence 99 99998 8999999999 9999753
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.8e-31 Score=231.58 Aligned_cols=231 Identities=19% Similarity=0.324 Sum_probs=194.9
Q ss_pred ecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEec
Q 018697 62 FSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141 (351)
Q Consensus 62 ~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 141 (351)
.+|...|.+++| +++.++++ +.|+.|++||+. +.+.+..+.+|...|.+++| ++. ++++++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g----~~dg~i~iwd~~---------~~~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~ 191 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSG----LRDNTIKIWDKN---------TLECKRILTGHTGSVLCLQY--DER-VIITGSS 191 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEE----ESSSCEEEEESS---------SCCEEEEECCCSSCEEEEEC--CSS-EEEEEET
T ss_pred cCCCCcEEEEEE--CCCEEEEE----eCCCeEEEEeCC---------CCeEEEEEcCCCCcEEEEEE--CCC-EEEEEcC
Confidence 456778998887 67777775 799999999998 67788889999999999999 455 4777789
Q ss_pred CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCc--eeecce---eEEEEc
Q 018697 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN--SIEHAH---VRNVDY 216 (351)
Q Consensus 142 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~---v~~~~~ 216 (351)
||.|++||+.++..... ..+|...|.+++|++ ..+++++.|+.|++||++++.... ....+| +.+++|
T Consensus 192 dg~i~vwd~~~~~~~~~-----~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 192 DSTVRVWDVNTGEMLNT-----LIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp TSCEEEEESSSCCEEEE-----ECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred CCeEEEEECCCCcEEEE-----EcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 99999999997643322 235677899999974 589999999999999999877653 222244 889998
Q ss_pred CCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccc
Q 018697 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296 (351)
Q Consensus 217 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 296 (351)
++. ++++|+.||.|++||+++ .+.+..+.+|...|.++.|+ + .++++|+.|+.|++||+++
T Consensus 265 --~~~-~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~------------ 325 (435)
T 1p22_A 265 --DDK-YIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIEC------------ 325 (435)
T ss_dssp --ETT-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTT------------
T ss_pred --CCC-EEEEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCC------------
Confidence 565 799999999999999998 67889999999999999994 4 8999999999999999998
Q ss_pred cCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++++..+.+|...|.+++| ++. +|++++.||.|++||+..
T Consensus 326 -------~~~~~~~~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 326 -------GACLRVLEGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp -------CCEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHHH
T ss_pred -------CCEEEEEeCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECCC
Confidence 8889999999999999999 556 899999999999999854
No 118
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.6e-30 Score=227.50 Aligned_cols=245 Identities=19% Similarity=0.272 Sum_probs=199.1
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~ 94 (351)
+...|..+.+++++..++.|+ .++.|.+|++.... ....+.+|...|.+++++ +..|++ ++.|+.++
T Consensus 146 ~~~~V~sv~fspdg~~lasgs----~Dg~v~iWd~~~~~---~~~~~~~h~~~v~~~s~~--~~~l~s----gs~d~~i~ 212 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGT----SSAEVQLWDVQQQK---RLRNMTSHSARVGSLSWN--SYILSS----GSRSGHIH 212 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEE----TTSCEEEEETTTTE---EEEEECCCSSCEEEEEEE--TTEEEE----EETTSEEE
T ss_pred CCCcEEEEEECCCCCEEEEEE----CCCeEEEEEcCCCc---EEEEEeCCCCceEEEeeC--CCEEEE----EeCCCcee
Confidence 345678888999999998875 58999999987642 346678999999998885 445555 47999999
Q ss_pred EEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeee
Q 018697 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (351)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (351)
+|+... ....+..+.+|...+..+.|+|++.. +++++.|+.+++|+..++....... .....|...|.++
T Consensus 213 ~~d~~~--------~~~~~~~~~~h~~~~~~~~~~~~g~~-l~s~~~D~~v~i~~~~~~~~~~~~~-~~~~~~~~~V~~~ 282 (420)
T 4gga_A 213 HHDVRV--------AEHHVATLSGHSQEVCGLRWAPDGRH-LASGGNDNLVNVWPSAPGEGGWVPL-QTFTQHQGAVKAV 282 (420)
T ss_dssp EEETTS--------SSCEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEESSCCSSCSCCS-EEECCCSSCEEEE
T ss_pred Eeeecc--------cceeeEEecccccceeeeeecCCCCe-eeeeeccccceEEeeccccccceee-eeecccCCceeee
Confidence 999873 34567788999999999999999994 6666899999999998754332222 2234567789999
Q ss_pred EECCCCCcEEE---eecCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEE-ecCCCeEEEEecccCCcceeEee
Q 018697 175 AWDPHDVNAVA---ATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVT-AADESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 175 ~~~~~~~~l~~---~~~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~ 249 (351)
+|+|.+..+++ ++.|+.|++||+++++....+.... +.++.|+|++..++++ |..|+.|++||+++ .+++.++.
T Consensus 283 ~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~-~~~v~~l~ 361 (420)
T 4gga_A 283 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELK 361 (420)
T ss_dssp EECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEEC
T ss_pred eeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCC-CcEEEEEc
Confidence 99998776553 3479999999999998888777444 9999999999854433 34799999999998 67899999
Q ss_pred CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 250 GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 250 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
+|...|++++|+|+| .+|+||+.|++|++||+..
T Consensus 362 gH~~~V~~l~~spdg-~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 362 GHTSRVLSLTMSPDG-ATVASAAADETLRLWRCFE 395 (420)
T ss_dssp CCSSCEEEEEECTTS-SCEEEEETTTEEEEECCSC
T ss_pred CCCCCEEEEEEcCCC-CEEEEEecCCeEEEEECCC
Confidence 999999999999999 9999999999999999986
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-31 Score=248.43 Aligned_cols=249 Identities=16% Similarity=0.297 Sum_probs=200.0
Q ss_pred cceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCC--CCceEEEEeecCCcc
Q 018697 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF--DQRIFSTVFSTGESY 91 (351)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~--~~~l~~~~~~~~~d~ 91 (351)
.+...+..+.+++++..++.|+ .++.|.+|++..... .....+.+|.+.|.+++|+|+ +..|+++ +.|+
T Consensus 7 gH~~~V~~l~~s~dg~~latg~----~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~----s~Dg 77 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASC----SYDG 77 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEE----TTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEECCTTSCSEEEEE----ETTS
T ss_pred cCcceeEEEEECCCCCeEEEEE----CCCcEEEEecCCCCC-ccceeccCCcCceEEEEecCCCCCCEEEEE----eCCC
Confidence 3456688888999998888874 589999999885433 334667899999999999988 7777775 7899
Q ss_pred eEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC--CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccc
Q 018697 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
.|++||+.. .....+..+..|...|.+++|+|+ +. .+++++.||.|++||+.+........ ..+|..
T Consensus 78 ~I~vwd~~~-------~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~~~---~~~~~~ 146 (753)
T 3jro_A 78 KVLIWKEEN-------GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPII---IDAHAI 146 (753)
T ss_dssp CEEEEEEET-------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCCEE---EECCSS
T ss_pred eEEEEECCC-------CcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcceeE---eecCCC
Confidence 999999982 223477788899999999999999 66 47777899999999998753332222 235667
Q ss_pred ceeeeEECC-------------CCCcEEEeecCCeEEEEEcccCCcC----ceeecce---eEEEEcCCC---CCcEEEE
Q 018697 170 YLSGGAWDP-------------HDVNAVAATCESSVQFWDLRSMGKT----NSIEHAH---VRNVDYDTK---KKHLLVT 226 (351)
Q Consensus 170 ~v~~~~~~~-------------~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~---v~~~~~~~~---~~~~l~~ 226 (351)
.|.+++|+| ++..+++++.||.|++||++++... ..+. .| |.+++|+|+ +. ++++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~-~l~s 224 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRS-YLAS 224 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSE-EEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCC-EEEE
Confidence 999999999 5889999999999999999987532 2233 34 999999999 66 8999
Q ss_pred ecCCCeEEEEecccCCc----ceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCC
Q 018697 227 AADESGIHLWDLRMLKA----PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTS 285 (351)
Q Consensus 227 ~~~dg~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 285 (351)
++.||.|++||++.... .+.....|...|++++|+|++ .++++++.||.|++||+...
T Consensus 225 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECCBCCSS
T ss_pred EecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEEecCCC
Confidence 99999999999987321 233344688999999999999 99999999999999999853
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.9e-30 Score=229.02 Aligned_cols=253 Identities=17% Similarity=0.291 Sum_probs=192.1
Q ss_pred eeeecCCCCc-ceEEEeeeeeCCCCEEEEEEeCCC-------CCeEEEEeeecCCcceeeeeeCCCCC-ceEEEEeecCC
Q 018697 19 ISDVKADTDH-TSFLTGTLSLKEENEVHLLRLSSG-------GTELICEGLFSHPNEIWDLSSCPFDQ-RIFSTVFSTGE 89 (351)
Q Consensus 19 ~~~~~~~~~~-~~~~~g~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~h~~~v~~i~~~~~~~-~l~~~~~~~~~ 89 (351)
+..+.+.++. ..++.+ ..++.|++|++... ........+.+|...|.+++|+|++. .|++ ++.
T Consensus 131 v~~l~~~p~~~~~lat~----~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s----~~~ 202 (430)
T 2xyi_A 131 VNRARYMPQNACVIATK----TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS----ASD 202 (430)
T ss_dssp CSEEEEETTEEEEEEEE----CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE----ECT
T ss_pred EEEEEECCCCCcEEEEE----CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE----EeC
Confidence 4445566653 344444 35788999999862 11223355678999999999999988 5555 489
Q ss_pred cceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccc
Q 018697 90 SYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
|+.|++|++..... ..........+..|...|.+++|+|++..++++++.|+.|++||+++........ ....|..
T Consensus 203 dg~i~vwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~--~~~~~~~ 278 (430)
T 2xyi_A 203 DHTICLWDINATPK--EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSH--TVDAHTA 278 (430)
T ss_dssp TSCEEEEETTSCCB--GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSE--EEECCSS
T ss_pred CCeEEEEeCCCCCC--CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCccee--EeecCCC
Confidence 99999999973100 0011223566778999999999999766666777899999999999753211111 1125667
Q ss_pred ceeeeEECCCCCc-EEEeecCCeEEEEEcccC-CcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCC--
Q 018697 170 YLSGGAWDPHDVN-AVAATCESSVQFWDLRSM-GKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK-- 242 (351)
Q Consensus 170 ~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~-~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-- 242 (351)
.|.+++|+|+++. +++++.||.|++||+++. ..+..+. .| |.+++|+|+++.+|++++.|+.|++||++...
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 8999999999985 778899999999999984 4555655 34 99999999998789999999999999998632
Q ss_pred -----------cceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 243 -----------APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 243 -----------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
+.+..+.+|...|++++|+|+++.+|++++.|+.|++|++..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 456667789999999999999944999999999999999975
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.2e-30 Score=225.25 Aligned_cols=244 Identities=14% Similarity=0.141 Sum_probs=181.1
Q ss_pred cCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecccc-----ceeEEEecCCCCCcEE
Q 018697 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG-----KINCVLWWSSGRHDKL 137 (351)
Q Consensus 63 ~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~~ 137 (351)
.|...|.+++|||+|+.|+++ +.||.|++|+.. ..+..+. |.. .|.+++|+|+|+. ++
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~----s~dg~V~iwd~~-----------~~l~~l~-~~~~~~~~sv~svafSPDG~~-LA 145 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVL----SNNGNVSVFKDN-----------KMLTNLD-SKGNLSSRTYHCFEWNPIESS-IV 145 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEE----ETTSCEEEEETT-----------EEEEECC-CSSCSTTTCEEEEEECSSSSC-EE
T ss_pred CCCCcEEEEEECCCCCEEEEE----eCCCcEEEEeCC-----------ceeeecc-CCCccccccEEEEEEcCCCCE-EE
Confidence 568899999999999999986 799999999965 2566666 665 4999999999995 77
Q ss_pred EEecCCcEEEEEcCCCCC------CcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcC---ceeec
Q 018697 138 VSIDEENIFLWSLDCSNK------NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT---NSIEH 208 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~---~~~~~ 208 (351)
+++.||+|++||+.++.. ....+.....+|...|.+++|+|++ +++++.|+.|++||+..+... ..+..
T Consensus 146 sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 146 VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEEC
T ss_pred EEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecc
Confidence 778999999999987532 1122222345678899999999998 889999999999999887743 24433
Q ss_pred ce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEe--cCCCCCeEEEeeCCCeEEEEEcC
Q 018697 209 AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCC--NPEYDGFILSAGTDSTVNLWLVS 283 (351)
Q Consensus 209 ~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~dg~i~iwd~~ 283 (351)
+| |.+++|+ +. .+++++ +++|++||+.. ++......+|...|..++| +|++ ..+++++.||+ ++|...
T Consensus 224 ~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~-~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 224 ASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKN-YSISSLKTGSLENFHIIPLNHEKES-TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTT-TEEEEEECSCCSCCCEEEETTCSSC-EEEEECSSCEE-EEEESS
T ss_pred cccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCC-CeEEEEEcCCCceEEEEEeeeCCCC-CEEEEEcCCCC-EEEeec
Confidence 44 9999999 45 788777 69999999986 4432333389999999999 9999 99999999999 999986
Q ss_pred CCC--CCCCCCccc---ccCCcccccccceeeccccceEEEEEeCCCCCceEEEeee
Q 018697 284 TSN--HDELPSESL---VESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY 335 (351)
Q Consensus 284 ~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 335 (351)
... ++....... ...|+ ..+..+..+.+ ...|++++|+|+|+ ++|+++.
T Consensus 297 ~~~~spd~~l~a~~d~~v~lW~-~~g~~l~~~~~-~~~I~~va~SPdG~-~lA~~~~ 350 (588)
T 2j04_A 297 ELHVTADNIIAPYLEKKFKKWS-TIWNEFNNYET-TLVIHGISLSPDGY-SIAIVYD 350 (588)
T ss_dssp SEEEECCCSSHHHHHHHHHHTT-TTTTSSSSSCC-EEEEEEEEECTTSS-EEEEEEE
T ss_pred cEEECCCceEEEEcCCEEEEEE-CCCCceeeecc-ceEEEEEEECCCCC-EEEEEEe
Confidence 311 000000000 01111 12233444444 66799999999998 7888763
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=8.1e-29 Score=218.78 Aligned_cols=261 Identities=11% Similarity=0.075 Sum_probs=196.5
Q ss_pred EEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeee-----eeec
Q 018697 44 VHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIA-----ALDA 118 (351)
Q Consensus 44 i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~-----~~~~ 118 (351)
+.++.++.....+...........+.+++|+| +..++++ ++.++.|++||+. ..+... .+.+
T Consensus 101 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~---~~~~~~i~~~d~~---------~g~~~~~~~~~~~~~ 167 (433)
T 3bws_A 101 EKLIALDKEGITHRFISRFKTGFQPKSVRFID-NTRLAIP---LLEDEGMDVLDIN---------SGQTVRLSPPEKYKK 167 (433)
T ss_dssp TCEEECCBTTCSEEEEEEEECSSCBCCCEESS-SSEEEEE---BTTSSSEEEEETT---------TCCEEEECCCHHHHT
T ss_pred eEEEEECCCCCcceEEEEEcCCCCceEEEEeC-CCeEEEE---eCCCCeEEEEECC---------CCeEeeecCcccccc
Confidence 35566665443333333333455677999999 5555555 4788899999987 444444 4457
Q ss_pred cccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee-cCCeEEEEEc
Q 018697 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDL 197 (351)
Q Consensus 119 h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~ 197 (351)
|...|.+++|+|++. ++++++.|+.|++||+.++.....+. .|...+.+++|+|+++.+++++ .++.|++||+
T Consensus 168 ~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 168 KLGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAYKATVD-----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp TCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCEEEEEE-----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceEEEEEc-----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEEC
Confidence 889999999999887 35666789999999998654333222 3455899999999999886655 7999999999
Q ss_pred ccCCcCceeecce-eEEEEcCCCCCcEEEEec--------CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeE
Q 018697 198 RSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAA--------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI 268 (351)
Q Consensus 198 ~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 268 (351)
++++....+.... +.+++|+|+++ .+++++ .|+.|++||+++ .+.+..+ .|...+.+++|+|+++.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~ 318 (433)
T 3bws_A 242 KTKLEIRKTDKIGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIY 318 (433)
T ss_dssp TTTEEEEECCCCSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEE
T ss_pred CCCcEEEEecCCCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEE
Confidence 9887776666433 99999999998 566665 588999999986 5455444 4566889999999994566
Q ss_pred EEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeee-------------
Q 018697 269 LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY------------- 335 (351)
Q Consensus 269 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------------- 335 (351)
++++.|+.|++||+.. ++.+..+. +...+.+++|+|+++ ++++++.
T Consensus 319 ~~~~~~~~v~v~d~~~-------------------~~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 319 VSDMCCSKIEVYDLKE-------------------KKVQKSIP-VFDKPNTIALSPDGK-YLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp EEETTTTEEEEEETTT-------------------TEEEEEEE-CSSSEEEEEECTTSS-EEEEEECCCCCTTTCTTSCC
T ss_pred EEecCCCEEEEEECCC-------------------CcEEEEec-CCCCCCeEEEcCCCC-EEEEEecCCCcccccccccc
Confidence 7779999999999997 67666664 566799999999998 5666654
Q ss_pred --CCeEEEeecCcc
Q 018697 336 --DGRVVVESVKPF 347 (351)
Q Consensus 336 --dg~v~vw~~~~~ 347 (351)
||.|++||+.+.
T Consensus 378 ~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 378 LVLGKVYVIDTTTD 391 (433)
T ss_dssp SSCCEEEEEETTTT
T ss_pred ccceEEEEEECCCC
Confidence 579999998753
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=6e-30 Score=211.64 Aligned_cols=251 Identities=13% Similarity=0.098 Sum_probs=166.5
Q ss_pred eeccccceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCC----CCeEEEEeeecCCcceeeeeeCCCCCceEEEE
Q 018697 9 GYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSG----GTELICEGLFSHPNEIWDLSSCPFDQRIFSTV 84 (351)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~ 84 (351)
+|.+.+...++..+.+.|+...+++-....-+-+.++.+.++++ +..+.. .+|...|+++ +++ .++.+.
T Consensus 79 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s---~g~~~~v~~l---~~g-~lv~ss 151 (356)
T 2w18_A 79 LYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK---SGNIKAVLGL---TKR-RLVSSS 151 (356)
T ss_dssp EEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE---EEEEEEEEEE---TTT-EEEEEE
T ss_pred eEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe---CCCeEEEEec---CCC-cEEEec
Confidence 44555544455555555555555544443344455666666665 322222 2344555554 333 333331
Q ss_pred eecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecC---CCCCcEEEEecCCcEEEEEcCCCCCCccccc
Q 018697 85 FSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS---SGRHDKLVSIDEENIFLWSLDCSNKNAQVQS 161 (351)
Q Consensus 85 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~ 161 (351)
..+.|+.|++|++.. .++.+..+..|...+..++|++ ++. ++++++.|++|+|||+.+++....+..
T Consensus 152 -~~g~d~~V~~~~~s~--------dG~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~l~tL~g 221 (356)
T 2w18_A 152 -GTLSDQQVEVMTFAE--------DGGGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQLLKKMHI 221 (356)
T ss_dssp -SSSTTCEEEEEEECT--------TSCEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred -ccCCCCcEEEEEECC--------CCceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcEEEEEcC
Confidence 124699999999962 5677788889999999999999 445 355558999999999998765544432
Q ss_pred ccccCcccceeeeEECCCCCcE------------EEeecCCeEEEEEcccCCcCcee----ecce---eEEEEcCCCCCc
Q 018697 162 KQSSGMLHYLSGGAWDPHDVNA------------VAATCESSVQFWDLRSMGKTNSI----EHAH---VRNVDYDTKKKH 222 (351)
Q Consensus 162 ~~~~~~~~~v~~~~~~~~~~~l------------~~~~~d~~i~iwd~~~~~~~~~~----~~~~---v~~~~~~~~~~~ 222 (351)
.. .+...+.+++|+|++..+ ++++.|++|++||..+++.+..+ ..+| +.+..+ ++.
T Consensus 222 ~~--~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~- 296 (356)
T 2w18_A 222 DD--SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDH- 296 (356)
T ss_dssp CC-----CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETT-
T ss_pred CC--cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCC-
Confidence 11 123467788999999876 45678999999999988765543 2244 333333 355
Q ss_pred EEEEecCCCeEEEEecccCCcceeEeeCCCCcee-EEEecCCCCCeEEEeeCCCeEEEEEcC
Q 018697 223 LLVTAADESGIHLWDLRMLKAPIQELPGHTHWTW-AVCCNPEYDGFILSAGTDSTVNLWLVS 283 (351)
Q Consensus 223 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~dg~i~iwd~~ 283 (351)
++++++.|++|+|||+++ ++.+.++.+|...+. .++|+|+| .+|++|+.|++|+|||+.
T Consensus 297 ~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG-~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTD-SHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSS-SEEEEECTTSCEEEEEEC
T ss_pred EEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCC-CEEEEEECCCcEEEecCC
Confidence 799999999999999998 778999999987665 58999999 999999999999999963
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=4.1e-29 Score=217.76 Aligned_cols=229 Identities=17% Similarity=0.120 Sum_probs=164.8
Q ss_pred CCCCEEEEEEeCCCCCe--EEEEeeecCCcceeeeeeCC--------CCCceEEEEeecCCcceEEEEEcccccCCCCCC
Q 018697 39 KEENEVHLLRLSSGGTE--LICEGLFSHPNEIWDLSSCP--------FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSP 108 (351)
Q Consensus 39 ~~~~~i~~~~~~~~~~~--~~~~~~~~h~~~v~~i~~~~--------~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 108 (351)
..++.|++|+....... .....+.+|.+.|++++|+| +++.|+++ +.|++|+|||+.
T Consensus 108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~----s~D~tv~~Wd~~--------- 174 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASV----GDDCTLIIWRLT--------- 174 (393)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE----ETTSEEEEEEEE---------
T ss_pred eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEE----ECCCeEEEEECC---------
Confidence 46899999998865322 12234678999999999998 66677664 799999999998
Q ss_pred cceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccc--------------------ccccCcc
Q 018697 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS--------------------KQSSGML 168 (351)
Q Consensus 109 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~--------------------~~~~~~~ 168 (351)
...++..+..|..+|.+++|+|++..++++++.|++|++||+.++........ ....+|.
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 55667777789999999999999876577779999999999987643322111 1123566
Q ss_pred cceeeeEEC-CCCCcEEEeecCCeEEEEEcccCCcCceeecce--e-------------------EEEEcCCCCCcEEEE
Q 018697 169 HYLSGGAWD-PHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--V-------------------RNVDYDTKKKHLLVT 226 (351)
Q Consensus 169 ~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--v-------------------~~~~~~~~~~~~l~~ 226 (351)
..+.++.|. |+++.+++++.|+.+++||+..++....+.... + ..+.+.+.+..++++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA 334 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence 788889886 789999999999999999998776544433111 1 222233334446778
Q ss_pred ecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcC
Q 018697 227 AADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVS 283 (351)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 283 (351)
|+.||.|++||+.+ +++...+..|..+|.+++|+|+| ++||+++.+| +.+|.+.
T Consensus 335 gs~Dg~V~lwd~~~-~~~~~~~~~~~~~V~svafspdG-~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 335 HSQHGLIQLINTYE-KDSNSIPIQLGMPIVDFCWHQDG-SHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ETTTTEEEEEETTC-TTCCEEEEECSSCEEEEEECTTS-SEEEEEESSE-EEEEEEG
T ss_pred ECCCCEEEEEECCC-CcEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCC-eEEEEEe
Confidence 89999999999987 56677777899999999999999 9999998776 5566553
No 125
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.6e-27 Score=200.24 Aligned_cols=245 Identities=19% Similarity=0.270 Sum_probs=194.2
Q ss_pred ceeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEE
Q 018697 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~ 94 (351)
+...+..+.++++...++.|+ .++.|++|++.... ....+.+|...+.++.+. +..++++ +.++.++
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs----~Dg~v~iw~~~~~~---~~~~~~~h~~~~~~~~~~--~~~l~s~----~~~~~~~ 132 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGT----SSAEVQLWDVQQQK---RLRNMTSHSARVGSLSWN--SYILSSG----SRSGHIH 132 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEE----TTSEEEEEETTTTE---EEEEEECCSSCEEEEEEE--TTEEEEE----ETTSEEE
T ss_pred CCCeEEEEEECCCCCEEEEEE----CCCcEEEeecCCce---eEEEecCccceEEEeecC--CCEEEEE----ecCCceE
Confidence 344577788888888888775 68999999987642 345677899988876654 4556553 7899999
Q ss_pred EEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeee
Q 018697 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (351)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (351)
+|+... ....+..+.+|...+.++.+++++.. +++++.|+.|++||+.++....... .....+...+.++
T Consensus 133 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~v~~~ 202 (318)
T 4ggc_A 133 HHDVRV--------AEHHVATLSGHSQEVCGLRWAPDGRH-LASGGNDNLVNVWPSAPGEGGWVPL-QTFTQHQGAVKAV 202 (318)
T ss_dssp EEETTS--------SSCEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEESSCBTTBSCCS-EEECCCCSCEEEE
T ss_pred eeecCC--------CceeEEEEcCccCceEEEEEcCCCCE-EEEEecCcceeEEECCCCcccccce-eeecccCCceEEE
Confidence 999873 34667788899999999999999984 6677899999999998754433222 2233456689999
Q ss_pred EECCCCCcEE---EeecCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEE-ecCCCeEEEEecccCCcceeEee
Q 018697 175 AWDPHDVNAV---AATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVT-AADESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 175 ~~~~~~~~l~---~~~~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~ 249 (351)
+++|++..++ +++.++.|++||.+............ +..+.|+|++..++++ |+.|+.|++||+++ .+++.++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-~~~~~~l~ 281 (318)
T 4ggc_A 203 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELK 281 (318)
T ss_dssp EECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEEC
T ss_pred EecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-CcEEEEEc
Confidence 9999887654 34578999999999877666655444 9999999999854433 45899999999998 77899999
Q ss_pred CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 250 GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 250 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
+|...|++++|+|++ .+|+||+.|++|+|||+..
T Consensus 282 gH~~~V~~l~~spdg-~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 282 GHTSRVLSLTMSPDG-ATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CCSSCEEEEEECTTS-SCEEEEETTTEEEEECCSC
T ss_pred CCCCCEEEEEEcCCC-CEEEEEecCCeEEEEECCC
Confidence 999999999999999 9999999999999999976
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=9.4e-28 Score=209.10 Aligned_cols=226 Identities=13% Similarity=0.104 Sum_probs=179.6
Q ss_pred ceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcc
Q 018697 79 RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQ 158 (351)
Q Consensus 79 ~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~ 158 (351)
+++++ ++.|+.|++||+. ..+.+..+..|. .+.+++|+|+++.++++++.|+.|++||+.+++....
T Consensus 3 ~l~vs---~~~d~~v~v~d~~---------~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~ 69 (391)
T 1l0q_A 3 FAYIA---NSESDNISVIDVT---------SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT 69 (391)
T ss_dssp EEEEE---ETTTTEEEEEETT---------TTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EEEEE---cCCCCEEEEEECC---------CCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE
Confidence 34444 5889999999998 667777787665 5899999999996445667899999999986543332
Q ss_pred cccccccCcccceeeeEECCCCCcEEEee-cCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEE
Q 018697 159 VQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLW 236 (351)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~ 236 (351)
+.. ...+.+++|+|+++.|++++ .++.|++||+.+++....+.... +.+++|+|+++.++++++.++.|++|
T Consensus 70 ~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 143 (391)
T 1l0q_A 70 VPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVI 143 (391)
T ss_dssp EEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 221 12799999999999887655 67999999999988777776444 99999999998655889999999999
Q ss_pred ecccCCcceeEeeCCCCceeEEEecCCCCCeE-EEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccc
Q 018697 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI-LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYED 315 (351)
Q Consensus 237 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (351)
|+++ .+.+..+..+ ..+..++|+|++ .++ ++++.|+.|++||++. ++.+..+. +..
T Consensus 144 d~~~-~~~~~~~~~~-~~~~~~~~~~dg-~~l~~~~~~~~~v~~~d~~~-------------------~~~~~~~~-~~~ 200 (391)
T 1l0q_A 144 NTVT-KAVINTVSVG-RSPKGIAVTPDG-TKVYVANFDSMSISVIDTVT-------------------NSVIDTVK-VEA 200 (391)
T ss_dssp ETTT-TEEEEEEECC-SSEEEEEECTTS-SEEEEEETTTTEEEEEETTT-------------------TEEEEEEE-CSS
T ss_pred ECCC-CcEEEEEecC-CCcceEEECCCC-CEEEEEeCCCCEEEEEECCC-------------------CeEEEEEe-cCC
Confidence 9987 6667777655 456999999999 555 7888899999999998 66666664 445
Q ss_pred eEEEEEeCCCCCceEEEee---eCCeEEEeecCcc
Q 018697 316 SVYGLAWSSREPWIFASLS---YDGRVVVESVKPF 347 (351)
Q Consensus 316 ~v~~~~~~~~~~~~l~s~~---~dg~v~vw~~~~~ 347 (351)
.+.+++|+|+++ .+++++ .++.|++||+...
T Consensus 201 ~~~~~~~~~~g~-~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 201 APSGIAVNPEGT-KAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp EEEEEEECTTSS-EEEEEEECSSCCEEEEEETTTT
T ss_pred CccceEECCCCC-EEEEEecCcCCCcEEEEECCCC
Confidence 789999999998 566665 6899999998753
No 127
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.96 E-value=7.4e-27 Score=200.20 Aligned_cols=291 Identities=13% Similarity=0.098 Sum_probs=202.0
Q ss_pred ceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCC
Q 018697 29 TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSP 108 (351)
Q Consensus 29 ~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 108 (351)
+++++|++....+..+++|.++...+.+.......+...+..++|+|+++ |+++.. .+.++.|.+|++.. .
T Consensus 3 ~~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~-~~~~~~v~~~~~~~-------g 73 (347)
T 3hfq_A 3 ERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDK-EDDEGGIAAWQIDG-------Q 73 (347)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEE-ETTEEEEEEEEEET-------T
T ss_pred cEEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEe-cCCCceEEEEEecC-------C
Confidence 57889988877788999999998877776655666778888999999998 666531 13478999999962 2
Q ss_pred cceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccC-------cccceeeeEECCCCC
Q 018697 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSG-------MLHYLSGGAWDPHDV 181 (351)
Q Consensus 109 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~ 181 (351)
..+.+..+..+...+..++|+|+++.+++++..++.|.+|++........+......+ ....+.+++|+|+++
T Consensus 74 ~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 74 TAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp EEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred cEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 3345556566778899999999999634343478999999997433222221111111 122477899999999
Q ss_pred cEEEeecCCeEEEEEcc-cCCcCce--ee--cce-eEEEEcCCCCCcEEEEecCCCeEEEEecccC-Cc--ceeEeeCCC
Q 018697 182 NAVAATCESSVQFWDLR-SMGKTNS--IE--HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML-KA--PIQELPGHT 252 (351)
Q Consensus 182 ~l~~~~~d~~i~iwd~~-~~~~~~~--~~--~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~--~~~~~~~~~ 252 (351)
.+++...++.|.+||+. +++.... +. .+. +..++|+|+|+++++++..++.|.+|++... ++ .+..+....
T Consensus 154 l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 233 (347)
T 3hfq_A 154 LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIP 233 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSC
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecC
Confidence 44444568899999998 4432211 11 122 7889999999966666778899999998742 22 122333222
Q ss_pred ------CceeEEEecCCCCCeE-EEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCC
Q 018697 253 ------HWTWAVCCNPEYDGFI-LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR 325 (351)
Q Consensus 253 ------~~v~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 325 (351)
..+..++|+|+| ++| ++...++.|.+|++.... ....+..+..+...+.+++|+|+
T Consensus 234 ~~~~~~~~~~~i~~spdG-~~l~v~~~~~~~v~v~~~~~~g----------------~~~~~~~~~~~~~~~~~~~~spd 296 (347)
T 3hfq_A 234 ADYTAHNGAAAIRLSHDG-HFLYVSNRGYNTLAVFAVTADG----------------HLTLIQQISTEGDFPRDFDLDPT 296 (347)
T ss_dssp TTCCSCCEEEEEEECTTS-CEEEEEEETTTEEEEEEECGGG----------------CEEEEEEEECSSSCCCEEEECTT
T ss_pred CCCCCCCcceeEEECCCC-CEEEEEeCCCCEEEEEEECCCC----------------cEEEeEEEecCCCCcCeEEECCC
Confidence 458889999999 655 666678999999997400 03445555555666889999999
Q ss_pred CCceEEEeeeCCeEEEeecC
Q 018697 326 EPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 326 ~~~~l~s~~~dg~v~vw~~~ 345 (351)
|++++++...++.|.+|+++
T Consensus 297 g~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 297 EAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp SSEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEcCCCcEEEEEEe
Confidence 99444444456999999664
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=5.1e-27 Score=205.75 Aligned_cols=276 Identities=11% Similarity=0.061 Sum_probs=196.5
Q ss_pred CCcceEE-EeeeeeCCCC----EEEEEEe--CCCCCeEEEEeeecCCcceeeeeeCC--------------CCCceEEEE
Q 018697 26 TDHTSFL-TGTLSLKEEN----EVHLLRL--SSGGTELICEGLFSHPNEIWDLSSCP--------------FDQRIFSTV 84 (351)
Q Consensus 26 ~~~~~~~-~g~~~~~~~~----~i~~~~~--~~~~~~~~~~~~~~h~~~v~~i~~~~--------------~~~~l~~~~ 84 (351)
+.+..++ .|......++ .+++|++ ... ..+....+.+|...+..+++++ .+..++.+.
T Consensus 72 ~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s 150 (415)
T 2hqs_A 72 ALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPG-TVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVV 150 (415)
T ss_dssp TTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTT-CEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEE
T ss_pred hcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCC-CEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEE
Confidence 3344444 6766555667 7888988 543 3444466788999999888875 255666654
Q ss_pred eecCCc---ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecC---CcEEEEEcCCCCCCcc
Q 018697 85 FSTGES---YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE---ENIFLWSLDCSNKNAQ 158 (351)
Q Consensus 85 ~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d---~~v~iwd~~~~~~~~~ 158 (351)
... .+ +.|++||+. . .....+..|...+.+++|+|+|+. ++.++.+ ..|++||+.++... .
T Consensus 151 ~~~-~~~~~~~i~i~d~~---------g-~~~~~l~~~~~~v~~~~~Spdg~~-la~~s~~~~~~~i~~~d~~tg~~~-~ 217 (415)
T 2hqs_A 151 QTN-GGQFPYELRVSDYD---------G-YNQFVVHRSPQPLMSPAWSPDGSK-LAYVTFESGRSALVIQTLANGAVR-Q 217 (415)
T ss_dssp ECS-SSSCCEEEEEEETT---------S-CSCEEEEEESSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTTCCEE-E
T ss_pred ecC-CCCccceEEEEcCC---------C-CCCEEEeCCCCcceeeEEcCCCCE-EEEEEecCCCcEEEEEECCCCcEE-E
Confidence 221 23 799999986 2 345677789999999999999995 4555555 49999999875432 2
Q ss_pred cccccccCcccceeeeEECCCCCcEE-EeecCC--eEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecC-CC--
Q 018697 159 VQSKQSSGMLHYLSGGAWDPHDVNAV-AATCES--SVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAAD-ES-- 231 (351)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~-dg-- 231 (351)
+ ..+...+.+++|+|+++.|+ +++.++ .|++||+++++......... +.+++|+|+|+ .|++++. ++
T Consensus 218 l-----~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~-~l~~~s~~~g~~ 291 (415)
T 2hqs_A 218 V-----ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ-NLAFTSDQAGRP 291 (415)
T ss_dssp E-----ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSS-EEEEEECTTSSC
T ss_pred e-----ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCC-EEEEEECCCCCc
Confidence 1 12344789999999999888 455444 59999998876532222222 89999999998 4555554 55
Q ss_pred eEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCC---CeEEEEEcCCCCCCCCCCcccccCCcccccccce
Q 018697 232 GIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD---STVNLWLVSTSNHDELPSESLVESPNQRANSLLN 308 (351)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (351)
.|++||+.. + ....+..+...+..++|+|+| .+|+.++.+ ..|.+||+.. ++. .
T Consensus 292 ~i~~~d~~~-~-~~~~l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~~~d~~~-------------------~~~-~ 348 (415)
T 2hqs_A 292 QVYKVNING-G-APQRITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIAKQDLAT-------------------GGV-Q 348 (415)
T ss_dssp EEEEEETTS-S-CCEECCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEEEEETTT-------------------CCE-E
T ss_pred EEEEEECCC-C-CEEEEecCCCcccCeEECCCC-CEEEEEECcCCceEEEEEECCC-------------------CCE-E
Confidence 677778875 3 345566677889999999999 888777764 5899999987 444 3
Q ss_pred eeccccceEEEEEeCCCCCceEEEeeeCC---eEEEeecCc
Q 018697 309 SYSDYEDSVYGLAWSSREPWIFASLSYDG---RVVVESVKP 346 (351)
Q Consensus 309 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~v~vw~~~~ 346 (351)
.+..+. .+.+++|+|+|+ .|++++.++ .|++|++..
T Consensus 349 ~l~~~~-~~~~~~~spdg~-~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 349 VLSSTF-LDETPSLAPNGT-MVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp ECCCSS-SCEEEEECTTSS-EEEEEEEETTEEEEEEEETTS
T ss_pred EecCCC-CcCCeEEcCCCC-EEEEEEcCCCccEEEEEECCC
Confidence 444554 789999999999 677776666 799999864
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=2.1e-26 Score=196.68 Aligned_cols=277 Identities=12% Similarity=0.138 Sum_probs=188.8
Q ss_pred CCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec
Q 018697 39 KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA 118 (351)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 118 (351)
..++.|.+|++... +.........|...+.+++|+|+++.|+++. ..++.|.+|++... ....+.+..+..
T Consensus 12 ~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~---~~~~~v~~~~~~~~-----~~~~~~~~~~~~ 82 (343)
T 1ri6_A 12 PESQQIHVWNLNHE-GALTLTQVVDVPGQVQPMVVSPDKRYLYVGV---RPEFRVLAYRIAPD-----DGALTFAAESAL 82 (343)
T ss_dssp GGGTEEEEEEECTT-SCEEEEEEEECSSCCCCEEECTTSSEEEEEE---TTTTEEEEEEECTT-----TCCEEEEEEEEC
T ss_pred CCCCeEEEEEECCC-CcEEEeeeEecCCCCceEEECCCCCEEEEee---cCCCeEEEEEecCC-----CCceeecccccc
Confidence 35789999999763 3333344456888999999999999888873 44589999998621 113344455544
Q ss_pred cccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee-cCCeEEEEEc
Q 018697 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDL 197 (351)
Q Consensus 119 h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~ 197 (351)
+. .+..++|+|+++.+++++..++.|.+||+..+. ........ .....+.+++|+|+++.+++++ .++.|.+||+
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-PVGVVDVV--EGLDGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-EEEEEEEE--CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-cccccccc--cCCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 44 789999999999644444558899999995221 11111111 1122588999999999888887 8999999999
Q ss_pred cc-CCcCc----eee--cce-eEEEEcCCCCCcEEEEecCCCeEEEEecccC-Ccc--eeEeeC----C--CCceeEEEe
Q 018697 198 RS-MGKTN----SIE--HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML-KAP--IQELPG----H--THWTWAVCC 260 (351)
Q Consensus 198 ~~-~~~~~----~~~--~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~--~~~~~~----~--~~~v~~~~~ 260 (351)
.+ ++... .+. .+. +..++|+|+++++++++..++.|.+||++.. +.. ...+.. + ...+..++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 87 54322 112 122 8899999999966666778999999999632 211 222221 1 235668999
Q ss_pred cCCCCCeEE-EeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeE
Q 018697 261 NPEYDGFIL-SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRV 339 (351)
Q Consensus 261 ~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v 339 (351)
+|++ .+|+ ++..++.|.+||+..... ..+.+..+..+.. +.+++|+|+++++++++..++.|
T Consensus 239 s~dg-~~l~v~~~~~~~i~v~d~~~~~~---------------~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v 301 (343)
T 1ri6_A 239 TPDG-RHLYACDRTASLITVFSVSEDGS---------------VLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHI 301 (343)
T ss_dssp CTTS-SEEEEEETTTTEEEEEEECTTSC---------------CEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEE
T ss_pred CCCC-CEEEEEecCCCEEEEEEEcCCCC---------------ceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeE
Confidence 9999 6555 666799999999983100 0344444544444 88999999999444444478999
Q ss_pred EEeecC
Q 018697 340 VVESVK 345 (351)
Q Consensus 340 ~vw~~~ 345 (351)
.+|+++
T Consensus 302 ~v~~~d 307 (343)
T 1ri6_A 302 SVYEIV 307 (343)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999664
No 130
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.95 E-value=5.2e-25 Score=189.76 Aligned_cols=295 Identities=7% Similarity=0.041 Sum_probs=198.1
Q ss_pred CCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCC
Q 018697 25 DTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQ 104 (351)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~ 104 (351)
.+....+++|+++.+.++.|++|.++...+.+...... +...+..++|+|+++.|+++...+..++.|.+|++...
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~--- 85 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE--- 85 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT---
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC---
Confidence 34567889999988888999999999877666555544 77888999999999988887411113479999998721
Q ss_pred CCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccc-c--------cCcccceeeeE
Q 018697 105 LNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ-S--------SGMLHYLSGGA 175 (351)
Q Consensus 105 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~-~--------~~~~~~v~~~~ 175 (351)
....+.+.....+......+++ +++.++++...++.|.+|++............. . ..+...+.+++
T Consensus 86 --~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 86 --KGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR 161 (361)
T ss_dssp --TTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred --CCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence 0123444455555666777887 777544444568999999998544332221100 0 01122357899
Q ss_pred ECCCCCcEEEee-cCCeEEEEEcccCCc------Cc------eee--cce-eEEEEcCCCCCcEEEEecCCCeEEEEecc
Q 018697 176 WDPHDVNAVAAT-CESSVQFWDLRSMGK------TN------SIE--HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLR 239 (351)
Q Consensus 176 ~~~~~~~l~~~~-~d~~i~iwd~~~~~~------~~------~~~--~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 239 (351)
|+|+++++++++ .++.|.+|++..... +. ... ... +..++|+|++++++++...++.|.+||+.
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 999999877765 578999999886442 11 111 122 88999999999555555578999999998
Q ss_pred cCCcc--eeEee---CCCCceeEEEecCCCCCeEEEeeC--CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc
Q 018697 240 MLKAP--IQELP---GHTHWTWAVCCNPEYDGFILSAGT--DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD 312 (351)
Q Consensus 240 ~~~~~--~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (351)
. +.. +..+. .+......++|+|+| ++|+++.. ++.|.+|++..... ....+..+..
T Consensus 242 ~-g~~~~~~~~~~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~~i~v~~~~~~~g---------------~~~~~~~~~~ 304 (361)
T 3scy_A 242 D-GMLDEIQTVAADTVNAQGSGDIHLSPDG-KYLYASNRLKADGVAIFKVDETNG---------------TLTKVGYQLT 304 (361)
T ss_dssp T-TEEEEEEEEESCSSCCCCEEEEEECTTS-SEEEEEECSSSCEEEEEEECTTTC---------------CEEEEEEEEC
T ss_pred C-CceEEeEEEecCCCCCCCcccEEECCCC-CEEEEECCCCCCEEEEEEEcCCCC---------------cEEEeeEecC
Confidence 5 432 22232 233456899999999 77765554 58999999963100 0223334433
Q ss_pred ccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 313 YEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 313 ~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
...+.+++|+|+|++++++...++.|.+|+++
T Consensus 305 -g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 305 -GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp -SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred -CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 44678999999999444444478999998765
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=8.3e-25 Score=197.51 Aligned_cols=285 Identities=13% Similarity=0.099 Sum_probs=211.7
Q ss_pred eecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCC----CCCceEEEEeecCCcceEEEE
Q 018697 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCP----FDQRIFSTVFSTGESYGAAIW 96 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~----~~~~l~~~~~~~~~d~~i~vw 96 (351)
.+.+++++..++++. .++.|.+|+++....... ..+. +...+..++|+| ++++++++. ..+++|.+|
T Consensus 183 ~v~~spdg~~l~v~~----~d~~V~v~D~~~~t~~~~-~~i~-~g~~p~~va~sp~~~~dg~~l~v~~---~~~~~v~v~ 253 (543)
T 1nir_A 183 ISRMSASGRYLLVIG----RDARIDMIDLWAKEPTKV-AEIK-IGIEARSVESSKFKGYEDRYTIAGA---YWPPQFAIM 253 (543)
T ss_dssp EEEECTTSCEEEEEE----TTSEEEEEETTSSSCEEE-EEEE-CCSEEEEEEECCSTTCTTTEEEEEE---EESSEEEEE
T ss_pred eEEECCCCCEEEEEC----CCCeEEEEECcCCCCcEE-EEEe-cCCCcceEEeCCCcCCCCCEEEEEE---ccCCeEEEE
Confidence 455788888888875 359999999964333332 3333 566789999999 999998873 357899999
Q ss_pred EcccccCCCCCCcceeeeeeec----------cc-cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccccc
Q 018697 97 QIPELYGQLNSPQLERIAALDA----------HV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (351)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~----------h~-~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 165 (351)
|.. +++++..+.. |. ..+.++.++|++..++++...++.|.+||+.+.........
T Consensus 254 D~~---------t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i---- 320 (543)
T 1nir_A 254 DGE---------TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI---- 320 (543)
T ss_dssp ETT---------TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE----
T ss_pred ecc---------ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe----
Confidence 987 5666666654 22 37889999999986555557789999999986543321111
Q ss_pred CcccceeeeEECCCCCcEEEee-cCCeEEEEEcccCCcCceeecc---e---eEEEEcCCCCCcEEEEec-CCCeEEEEe
Q 018697 166 GMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA---H---VRNVDYDTKKKHLLVTAA-DESGIHLWD 237 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~---~---v~~~~~~~~~~~~l~~~~-~dg~i~i~d 237 (351)
.+...+.++.|+|+++++++++ .+++|.+||+.+++....+..+ | ...+ ++|++..+++++. .|++|.+||
T Consensus 321 ~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d 399 (543)
T 1nir_A 321 GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIG 399 (543)
T ss_dssp ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEE
T ss_pred ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEE
Confidence 1233678899999999887765 5899999999999887776632 3 2222 4677444777775 689999999
Q ss_pred cccC------CcceeEeeCCCCceeEEEecCCCCCeEEEee-------CCCeEEEEEcCCCCCCCCCCcccccCCccccc
Q 018697 238 LRML------KAPIQELPGHTHWTWAVCCNPEYDGFILSAG-------TDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (351)
Q Consensus 238 ~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
+... .+.++++..|...+..++++|++ ++|++++ .+++|.+||+.+ .
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg-~~l~v~~~~~~~~~~~~~v~v~d~~~-------------------~ 459 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS-SHLYVDTTFNPDARISQSVAVFDLKN-------------------L 459 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC-CEEEECCTTCSSHHHHTCEEEEETTC-------------------T
T ss_pred eCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC-CcEEEecCCCCCcccCceEEEEECCC-------------------C
Confidence 9862 45788999999899999999999 8898887 267999999998 4
Q ss_pred ccc-eee--------ccccceEEEEEeCCCCCceEEEee----eCCeEEEeecCccc
Q 018697 305 SLL-NSY--------SDYEDSVYGLAWSSREPWIFASLS----YDGRVVVESVKPFL 348 (351)
Q Consensus 305 ~~~-~~~--------~~~~~~v~~~~~~~~~~~~l~s~~----~dg~v~vw~~~~~~ 348 (351)
+.. ..+ ..+...+..+.|+|+|+.++++.. .|+.|.|||..+..
T Consensus 460 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 460 DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp TSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 444 222 345678999999999996555542 47999999988654
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=8.5e-25 Score=186.04 Aligned_cols=274 Identities=9% Similarity=0.039 Sum_probs=189.1
Q ss_pred CCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCC
Q 018697 25 DTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQ 104 (351)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~ 104 (351)
.++..++++.. ..++.|.+|+..... +. ..+..+...+ .++|+|+++.++++. ..++.|.+||+.
T Consensus 6 ~~~~~~~~v~~---~~~~~v~~~d~~~~~--~~-~~~~~~~~~~-~~~~s~dg~~l~~~~---~~~~~i~~~d~~----- 70 (331)
T 3u4y_A 6 QTTSNFGIVVE---QHLRRISFFSTDTLE--IL-NQITLGYDFV-DTAITSDCSNVVVTS---DFCQTLVQIETQ----- 70 (331)
T ss_dssp -CCCCEEEEEE---GGGTEEEEEETTTCC--EE-EEEECCCCEE-EEEECSSSCEEEEEE---STTCEEEEEECS-----
T ss_pred cCCCCEEEEEe---cCCCeEEEEeCcccc--ee-eeEEccCCcc-eEEEcCCCCEEEEEe---CCCCeEEEEECC-----
Confidence 34445544432 356889988876532 22 3333445566 999999999888763 567899999987
Q ss_pred CCCCccee-eeeeeccccceeEEEecCCCCCcEEEEecC-C--cEEEEEcCCCCCCcccccccccCcccceeeeEECCCC
Q 018697 105 LNSPQLER-IAALDAHVGKINCVLWWSSGRHDKLVSIDE-E--NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180 (351)
Q Consensus 105 ~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d-~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 180 (351)
..+. ...+..+..+..+++|+|+++. ++++..+ + .|.+||+.++.....+.. .....+++|+|++
T Consensus 71 ----~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~spdg 139 (331)
T 3u4y_A 71 ----LEPPKVVAIQEGQSSMADVDITPDDQF-AVTVTGLNHPFNMQSYSFLKNKFISTIPI------PYDAVGIAISPNG 139 (331)
T ss_dssp ----SSSCEEEEEEECSSCCCCEEECTTSSE-EEECCCSSSSCEEEEEETTTTEEEEEEEC------CTTEEEEEECTTS
T ss_pred ----CCceeEEecccCCCCccceEECCCCCE-EEEecCCCCcccEEEEECCCCCeEEEEEC------CCCccceEECCCC
Confidence 3444 5666667666666999999995 4444433 3 899999986543322211 1256899999999
Q ss_pred CcEEEee-cCCe-EEEEEcccCCcCc-----eeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcc---eeEee
Q 018697 181 VNAVAAT-CESS-VQFWDLRSMGKTN-----SIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP---IQELP 249 (351)
Q Consensus 181 ~~l~~~~-~d~~-i~iwd~~~~~~~~-----~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~ 249 (351)
+++++++ .++. |.+|++.....+. .+..+. +..++|+|+++++++++..++.|++||+++ .+. +..+.
T Consensus 140 ~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~ 218 (331)
T 3u4y_A 140 NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVG 218 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEE
T ss_pred CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC-Ccccceeeecc
Confidence 9877765 4577 9999987544321 122222 899999999986677777899999999986 555 66666
Q ss_pred CCCCceeEEEecCCCCCeE-EEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccccc--ceeeccc----cc---eEEE
Q 018697 250 GHTHWTWAVCCNPEYDGFI-LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDY----ED---SVYG 319 (351)
Q Consensus 250 ~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~---~v~~ 319 (351)
. ...+..++|+|+| +++ ++...++.|.+||..+ ++. +..+..+ .. ....
T Consensus 219 ~-~~~~~~~~~spdg-~~l~v~~~~~~~i~~~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (331)
T 3u4y_A 219 T-NNLPGTIVVSRDG-STVYVLTESTVDVFNFNQLS-------------------GTLSFVKSFGHGLLIDPRPLFGANQ 277 (331)
T ss_dssp C-SSCCCCEEECTTS-SEEEEECSSEEEEEEEETTT-------------------TEEEEEEEEECCCCCCCGGGTTCCC
T ss_pred C-CCCCceEEECCCC-CEEEEEEcCCCEEEEEECCC-------------------CceeeecccccccccCCCCcccccc
Confidence 4 4667899999999 655 4555688999999987 333 2222111 11 2356
Q ss_pred EEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 320 LAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 320 ~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++|+|+++.+++++..++.|.+|++..
T Consensus 278 ~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 278 MALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred eEECCCCCEEEEecCCCCcEEEEEecC
Confidence 899999995556666788999999975
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=6.5e-25 Score=192.40 Aligned_cols=254 Identities=12% Similarity=0.088 Sum_probs=183.3
Q ss_pred cceEEEeeeeeCCC--CEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCC
Q 018697 28 HTSFLTGTLSLKEE--NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL 105 (351)
Q Consensus 28 ~~~~~~g~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~ 105 (351)
..+++........+ +.|++|++.... ...+.+|...|.+++|+|+++.|+++... +.+..|++||+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~----~~~l~~~~~~v~~~~~Spdg~~la~~s~~-~~~~~i~~~d~~------ 211 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN----QFVVHRSPQPLMSPAWSPDGSKLAYVTFE-SGRSALVIQTLA------ 211 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS----CEEEEEESSCEEEEEECTTSSEEEEEECT-TSSCEEEEEETT------
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC----CEEEeCCCCcceeeEEcCCCCEEEEEEec-CCCcEEEEEECC------
Confidence 44566554332221 688888886432 24556799999999999999999887311 112489999997
Q ss_pred CCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCC--cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcE
Q 018697 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE--NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA 183 (351)
Q Consensus 106 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 183 (351)
+.+. ..+..|...+.+++|+|+|+.++++++.++ .|++||+.++.. ..+ ..|...+.+++|+|+++.|
T Consensus 212 ---tg~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l-----~~~~~~~~~~~~spdg~~l 281 (415)
T 2hqs_A 212 ---NGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQV-----TDGRSNNTEPTWFPDSQNL 281 (415)
T ss_dssp ---TCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEC-----CCCSSCEEEEEECTTSSEE
T ss_pred ---CCcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeC-----cCCCCcccceEECCCCCEE
Confidence 3343 356678889999999999996444555554 499999986432 111 2344578999999999999
Q ss_pred EEeec-CC--eEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCC---CeEEEEecccCCcceeEeeCCCCcee
Q 018697 184 VAATC-ES--SVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADE---SGIHLWDLRMLKAPIQELPGHTHWTW 256 (351)
Q Consensus 184 ~~~~~-d~--~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~ 256 (351)
++++. ++ .|++||+.+++......... +.+++|+|+|+ +|++++.+ ..|++||+.+ ++ ...+..+. .+.
T Consensus 282 ~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~-~~-~~~l~~~~-~~~ 357 (415)
T 2hqs_A 282 AFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLAT-GG-VQVLSSTF-LDE 357 (415)
T ss_dssp EEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEEEEETTT-CC-EEECCCSS-SCE
T ss_pred EEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCC-EEEEEECcCCceEEEEEECCC-CC-EEEecCCC-CcC
Confidence 88875 44 68888988776432222233 88999999999 45555543 5899999986 43 35565554 899
Q ss_pred EEEecCCCCCeEEEeeCCC---eEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCC
Q 018697 257 AVCCNPEYDGFILSAGTDS---TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREP 327 (351)
Q Consensus 257 ~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 327 (351)
+++|+|+| .+|++++.++ .|.+||+.. .....+..|...|.+++|+|...
T Consensus 358 ~~~~spdg-~~l~~~s~~~~~~~l~~~d~~g--------------------~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 358 TPSLAPNG-TMVIYSSSQGMGSVLNLVSTDG--------------------RFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEECTTS-SEEEEEEEETTEEEEEEEETTS--------------------CCEEECCCSSSEEEEEEECCCCC
T ss_pred CeEEcCCC-CEEEEEEcCCCccEEEEEECCC--------------------CcEEEeeCCCCCCcCCccccccc
Confidence 99999999 8888877766 799999864 55677888999999999999643
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=2.5e-25 Score=185.74 Aligned_cols=253 Identities=10% Similarity=0.119 Sum_probs=180.1
Q ss_pred CCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCc-ceeeeeee
Q 018697 39 KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQ-LERIAALD 117 (351)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~-~~~~~~~~ 117 (351)
..++.|++|++.... ...+..|...|.+++|+|+++.|+++ .++.|.+||+. . .+......
T Consensus 19 ~~~~~i~~~d~~~~~----~~~~~~~~~~v~~~~~spdg~~l~~~-----~~~~i~~~d~~---------~~~~~~~~~~ 80 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRK----MRVVWQTPELFEAPNWSPDGKYLLLN-----SEGLLYRLSLA---------GDPSPEKVDT 80 (297)
T ss_dssp CCCEEEEEEETTTTE----EEEEEEESSCCEEEEECTTSSEEEEE-----ETTEEEEEESS---------SCCSCEECCC
T ss_pred CcceeEEEEeCCCCc----eeeeccCCcceEeeEECCCCCEEEEE-----cCCeEEEEeCC---------CCCCceEecc
Confidence 356788888876532 23456689999999999999988875 47799999987 3 44444444
Q ss_pred cc-ccceeEEEecCCCCCcEEEEe--cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEE-EeecCCeEE
Q 018697 118 AH-VGKINCVLWWSSGRHDKLVSI--DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAV-AATCESSVQ 193 (351)
Q Consensus 118 ~h-~~~v~~~~~~~~~~~~~~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~ 193 (351)
.| ...+.+++|+|+++. +++++ .++...||.++........+.. ...+..++|+|+++.|+ ++..++.++
T Consensus 81 ~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~~~~~ 154 (297)
T 2ojh_A 81 GFATICNNDHGISPDGAL-YAISDKVEFGKSAIYLLPSTGGTPRLMTK-----NLPSYWHGWSPDGKSFTYCGIRDQVFD 154 (297)
T ss_dssp TTCCCBCSCCEECTTSSE-EEEEECTTTSSCEEEEEETTCCCCEECCS-----SSSEEEEEECTTSSEEEEEEEETTEEE
T ss_pred ccccccccceEECCCCCE-EEEEEeCCCCcceEEEEECCCCceEEeec-----CCCccceEECCCCCEEEEEECCCCceE
Confidence 55 477899999999995 44444 3345555555422222222211 12488899999999887 667899999
Q ss_pred EEEcccC-CcCceeec-ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEE
Q 018697 194 FWDLRSM-GKTNSIEH-AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILS 270 (351)
Q Consensus 194 iwd~~~~-~~~~~~~~-~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 270 (351)
+|+++.. .....+.. .. +.+++|+|+++.+++++..++.+++|+++.....+..+..|...+..++|+|++ .+|+.
T Consensus 155 l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~ 233 (297)
T 2ojh_A 155 IYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSG-DKVVF 233 (297)
T ss_dssp EEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTS-SEEEE
T ss_pred EEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCC-CEEEE
Confidence 9997532 22222221 22 999999999995555555689999999874455677788888889999999999 88877
Q ss_pred eeCC-----------CeEEEEEcCCCCCCCCCCcccccCCccccccc--ceeeccccceEEEEEeCCCCCceEEEeeeC
Q 018697 271 AGTD-----------STVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDYEDSVYGLAWSSREPWIFASLSYD 336 (351)
Q Consensus 271 ~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 336 (351)
++.+ +.|.+||+.. ++. +..+..|...+..++|+|+++ .|++++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~ 292 (297)
T 2ojh_A 234 VSYDADVFDHPRDLDVRVQLMDMDG-------------------GNVETLFDLFGGQGTMNSPNWSPDGD-EFAYVRYF 292 (297)
T ss_dssp EEEETTCCSCCSSEEEEEEEEETTS-------------------CSCEEEEEEEESTTTSCSCCBCTTSS-EEEEEEEC
T ss_pred EEcCCCCCcccccCceEEEEEecCC-------------------CCceeeeccCCCCcccccceECCCCC-EEEEEEec
Confidence 7765 5699999987 433 444457777899999999999 56666654
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=3.2e-24 Score=193.72 Aligned_cols=286 Identities=10% Similarity=0.067 Sum_probs=203.9
Q ss_pred CCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeee-cCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEc--cc
Q 018697 24 ADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLF-SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI--PE 100 (351)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~--~~ 100 (351)
++++.. +++. ...++.+.+|+.... .+. ..+. ++. ++.++|+|++++|+++ +.|+.|++||+ .
T Consensus 145 ~~p~~~-~~vs---~~~d~~V~v~D~~t~--~~~-~~i~~g~~--~~~v~~spdg~~l~v~----~~d~~V~v~D~~~~- 210 (543)
T 1nir_A 145 LDLPNL-FSVT---LRDAGQIALVDGDSK--KIV-KVIDTGYA--VHISRMSASGRYLLVI----GRDARIDMIDLWAK- 210 (543)
T ss_dssp CCGGGE-EEEE---EGGGTEEEEEETTTC--CEE-EEEECSTT--EEEEEECTTSCEEEEE----ETTSEEEEEETTSS-
T ss_pred cCCCCE-EEEE---EcCCCeEEEEECCCc--eEE-EEEecCcc--cceEEECCCCCEEEEE----CCCCeEEEEECcCC-
Confidence 455553 3333 235688999876543 232 3444 343 8999999999999987 56799999999 5
Q ss_pred ccCCCCCCcceeeeeeeccccceeEEEecC----CCCCcEEEEecCCcEEEEEcCCCCCCccccccccc-----Cc-ccc
Q 018697 101 LYGQLNSPQLERIAALDAHVGKINCVLWWS----SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS-----GM-LHY 170 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-----~~-~~~ 170 (351)
+.+.+.++. +...+..++|+| +++.+++++..+++|.+||..+.+....+...... -| ...
T Consensus 211 --------t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 211 --------EPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp --------SCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC
T ss_pred --------CCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCc
Confidence 567777776 455679999999 99964444456899999999876544333221100 01 126
Q ss_pred eeeeEECCCCCcEEE-eecCCeEEEEEcccCCcCc--eeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCccee
Q 018697 171 LSGGAWDPHDVNAVA-ATCESSVQFWDLRSMGKTN--SIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQ 246 (351)
Q Consensus 171 v~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~--~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 246 (351)
+.++.++|+++.+++ ...++.|.+||+.+.+.+. .+..+. +..++|+|+++++++++..+++|.+||..+ ++.+.
T Consensus 282 v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~ 360 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSA 360 (543)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEE
T ss_pred eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEE
Confidence 889999998876655 4578999999998876554 343333 889999999996666777789999999997 66777
Q ss_pred EeeC----CCCceeEEEecCCCCCeEEEee-CCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEE
Q 018697 247 ELPG----HTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLA 321 (351)
Q Consensus 247 ~~~~----~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 321 (351)
.+.. |......+ ++|++..+++++. .|++|.+||+......+ ..++++.++..|...+..++
T Consensus 361 ~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~------------~~~~~v~~l~~~g~~~~~v~ 427 (543)
T 1nir_A 361 LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ------------YAWKKVAELQGQGGGSLFIK 427 (543)
T ss_dssp EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT------------TBTSEEEEEECSCSCCCCEE
T ss_pred eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch------------hcCeEEEEEEcCCCCceEEE
Confidence 7764 54433333 4777437778776 68999999998621110 11678889999988889999
Q ss_pred eCCCCCceEEEee-------eCCeEEEeecCcc
Q 018697 322 WSSREPWIFASLS-------YDGRVVVESVKPF 347 (351)
Q Consensus 322 ~~~~~~~~l~s~~-------~dg~v~vw~~~~~ 347 (351)
++|+++ .|++++ .+++|.+||+.+.
T Consensus 428 ~~pdg~-~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 428 THPKSS-HLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp CCTTCC-EEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred cCCCCC-cEEEecCCCCCcccCceEEEEECCCC
Confidence 999999 677766 3789999999864
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=7.8e-24 Score=180.06 Aligned_cols=239 Identities=8% Similarity=-0.023 Sum_probs=172.8
Q ss_pred eeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEc
Q 018697 71 LSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSL 150 (351)
Q Consensus 71 i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~ 150 (351)
..|.+++..++++ .+.++.|.+||.. +.+....+..+...+ +++|+|+++.+++++..++.|.+||+
T Consensus 3 ~~~~~~~~~~~v~---~~~~~~v~~~d~~---------~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~ 69 (331)
T 3u4y_A 3 AMFQTTSNFGIVV---EQHLRRISFFSTD---------TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIET 69 (331)
T ss_dssp ----CCCCEEEEE---EGGGTEEEEEETT---------TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEEC
T ss_pred eeEcCCCCEEEEE---ecCCCeEEEEeCc---------ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 4566777777766 3788999999988 556666666666677 99999999964445555889999999
Q ss_pred CCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC-C--eEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEE
Q 018697 151 DCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-S--SVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVT 226 (351)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~ 226 (351)
.++........ .+..+..+++|+|++++++++..+ + .|.+||+.+++.+..+.... +.+++|+|++++++++
T Consensus 70 ~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 70 QLEPPKVVAIQ----EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILI 145 (331)
T ss_dssp SSSSCEEEEEE----ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEE
T ss_pred CCCceeEEecc----cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEE
Confidence 87543122111 122244449999999999855544 3 99999999988777776544 8999999999866777
Q ss_pred ecCCCe-EEEEecccCCcce---eEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccc
Q 018697 227 AADESG-IHLWDLRMLKAPI---QELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQR 302 (351)
Q Consensus 227 ~~~dg~-i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (351)
...++. |.+|++...+... .........+..++|+|+|+.+++++..++.|.+||+..
T Consensus 146 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~------------------ 207 (331)
T 3u4y_A 146 DRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN------------------ 207 (331)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS------------------
T ss_pred ecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC------------------
Confidence 677788 9999987533221 122234456799999999933556666789999999987
Q ss_pred cccc---ceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 303 ANSL---LNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 303 ~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++. +..+..+ ..+..++|+|+|++++++...++.|.+||+.+
T Consensus 208 -~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 208 -PENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp -TTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred -CcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 565 5566544 45789999999995556666788999999875
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=3.6e-24 Score=201.71 Aligned_cols=284 Identities=13% Similarity=0.094 Sum_probs=198.4
Q ss_pred eeEeeeecCCCCcceEEEeeeeeCCCC-----EEEEEEeCCCCCeEEEEeeecCC------------------------c
Q 018697 16 ARCISDVKADTDHTSFLTGTLSLKEEN-----EVHLLRLSSGGTELICEGLFSHP------------------------N 66 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~h~------------------------~ 66 (351)
.+.+..+.+++++.+++.+... ++ .|++|++..... . ..+..+. .
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~---d~~~~~~~i~~~d~~~g~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGK---DSDRNQLDLWSYDIGSGQT--R-LLVDSKVVLPGTETLSDEEKARRERQRIAAMT 109 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECC---SSCTTEEEEEEEETTTCCE--E-EEECGGGTC--------------------CCE
T ss_pred CCCCCCceEecCCCEEEEEecc---CCCCcccEEEEEECCCCce--e-Eccchhhcccccccccchhhhhhhhhhhcccc
Confidence 4557778889999999887531 33 777887765432 1 2222222 3
Q ss_pred ceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcce--eeeeeeccccceeEEEecCCCCCcEEEEecCCc
Q 018697 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLE--RIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (351)
Q Consensus 67 ~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~ 144 (351)
.|.+++|+||++.|+++. ++.|.+||+. ... ....+..|...+.+++|+|+|+. ++...++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~-----~~~i~~~d~~---------~~~~~~~~~l~~~~~~~~~~~~SPDG~~--la~~~~~~ 173 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPL-----GGELYLYDLK---------QEGKAAVRQLTHGEGFATDAKLSPKGGF--VSFIRGRN 173 (741)
T ss_dssp ESCCCEECTTSSEEEEEE-----TTEEEEEESS---------SCSTTSCCBCCCSSSCEEEEEECTTSSE--EEEEETTE
T ss_pred CcceeEECCCCCEEEEEe-----CCcEEEEECC---------CCCcceEEEcccCCcccccccCCCCCCE--EEEEeCCc
Confidence 489999999999998863 3899999987 221 34456678888999999999994 44434679
Q ss_pred EEEEEcCCCCCCccccccccc----Cc--------ccceeeeEECCCCCcEEEeecCC----------------------
Q 018697 145 IFLWSLDCSNKNAQVQSKQSS----GM--------LHYLSGGAWDPHDVNAVAATCES---------------------- 190 (351)
Q Consensus 145 v~iwd~~~~~~~~~~~~~~~~----~~--------~~~v~~~~~~~~~~~l~~~~~d~---------------------- 190 (351)
|++||+.++... .+...... ++ ...+.+++|+||++.|++++.|+
T Consensus 174 i~~~d~~~g~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 174 LWVIDLASGRQM-QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EEEEETTTTEEE-ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred EEEEecCCCCEE-EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 999999864322 11111100 00 01257899999999999987665
Q ss_pred -----------eEEEEEccc-CCcCceeec---ce-eEEEEcCCCCCcEEEEec-----CCCeEEEEecccCCcceeEee
Q 018697 191 -----------SVQFWDLRS-MGKTNSIEH---AH-VRNVDYDTKKKHLLVTAA-----DESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 191 -----------~i~iwd~~~-~~~~~~~~~---~~-v~~~~~~~~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~~ 249 (351)
.|++||+.+ ++....... .. +..++| |+|+. |+++. .+..|++||+.+ ++....+.
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~-l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~ 329 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQH-LSFQRQSRDQKKLDLVEVTLAS-NQQRVLAH 329 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTE-EEEEEEETTSSEEEEEEEETTT-CCEEEEEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCE-EEEEEecccCCeEEEEEEECCC-CceEEEEE
Confidence 888999988 765433221 22 899999 99994 55433 356899999987 55555555
Q ss_pred CCCC----ceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEE-EeCC
Q 018697 250 GHTH----WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL-AWSS 324 (351)
Q Consensus 250 ~~~~----~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~ 324 (351)
.+.. .+..++|+|+| +++++++.|+.++||.+.. .+. ...+..|...|..+ .|+|
T Consensus 330 ~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~~~------------------~~~-~~~l~~~~~~v~~~~~~s~ 389 (741)
T 2ecf_A 330 ETSPTWVPLHNSLRFLDDG-SILWSSERTGFQHLYRIDS------------------KGK-AAALTHGNWSVDELLAVDE 389 (741)
T ss_dssp EECSSCCCCCSCCEECTTS-CEEEEECTTSSCEEEEECS------------------SSC-EEESCCSSSCEEEEEEEET
T ss_pred cCCCCcCCcCCceEECCCC-eEEEEecCCCccEEEEEcC------------------CCC-eeeeeecceEEEeEeEEeC
Confidence 4443 45689999999 7999999999888888764 034 66677777778887 5999
Q ss_pred CCCceEEEeeeCC--eEEEeecC
Q 018697 325 REPWIFASLSYDG--RVVVESVK 345 (351)
Q Consensus 325 ~~~~~l~s~~~dg--~v~vw~~~ 345 (351)
+++.++++++.++ .++||+++
T Consensus 390 dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 390 KAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp TTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCCEEEEEEeCCCCceEEEEEEE
Confidence 9985556666666 89999875
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=9.2e-24 Score=197.84 Aligned_cols=284 Identities=11% Similarity=0.065 Sum_probs=193.7
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEE
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQ 97 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~ 97 (351)
.+..+.++++ .+++++. ++.+++|++... . ...+..+...+.+++|+|+++.|+.+ .++.|.+|+
T Consensus 83 ~v~~~~~spd-~~~~~~~-----~~~i~~~d~~~~--~--~~~l~~~~~~~~~~~~SpdG~~la~~-----~~~~i~v~~ 147 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT-----QGGLVGFDMLAR--K--VTYLFDTNEETASLDFSPVGDRVAYV-----RNHNLYIAR 147 (706)
T ss_dssp CCEEEEETTT-TEEEEEE-----TTEEEEEETTTT--E--EEEEECCTTCCTTCEECTTSSEEEEE-----ETTEEEEEE
T ss_pred CceeEEECCC-CeEEEEE-----CCEEEEEECCCC--c--eEEccCCcccccCCcCCCCCCEEEEE-----ECCeEEEEe
Confidence 4667778888 6777653 388999988653 2 23455677889999999999998885 568999999
Q ss_pred cccccCCCCCCcceeeeeeecccc--------------ceeEEEecCCCCCcEEEEe-----------------------
Q 018697 98 IPELYGQLNSPQLERIAALDAHVG--------------KINCVLWWSSGRHDKLVSI----------------------- 140 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~h~~--------------~v~~~~~~~~~~~~~~~~~----------------------- 140 (351)
+....+ ...+.......+.. .+.++.|+|||+. +++++
T Consensus 148 ~~~~~~----~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 148 GGKLGE----GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC-LAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp CBCTTS----CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE-EEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred cCcccc----cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCceEE
Confidence 872000 00333332222322 2588999999996 44433
Q ss_pred ----------cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCC-----eEEEEEcccCCcCce
Q 018697 141 ----------DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES-----SVQFWDLRSMGKTNS 205 (351)
Q Consensus 141 ----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~ 205 (351)
.+..|++||+.++... .+.. ...+...+.+++|+|+++.|++++.++ .|++||+.+++....
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~~~~~~~-~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHLATGKTV-YLQT--GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEETTTTEEE-ECCC--CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE
T ss_pred eeCCCCCCCCCeeEEEEEECCCCceE-eecc--CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE
Confidence 3467999999864322 1111 113445789999999999999887665 999999998843333
Q ss_pred eecc-e------eEEEEcCC--CCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeE-EEecCCCCCeEEEeeCCC
Q 018697 206 IEHA-H------VRNVDYDT--KKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWA-VCCNPEYDGFILSAGTDS 275 (351)
Q Consensus 206 ~~~~-~------v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~dg 275 (351)
+... + +..++|+| +|+ +++++..++.+++|++...+..+..+..+...+.. ++|+|+++.++++++.++
T Consensus 300 ~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 300 LFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp EEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred EEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 3211 1 35789999 998 78889899999999887435567777778777877 799999933445555554
Q ss_pred ----eEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeC---CeEEEeecCc
Q 018697 276 ----TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD---GRVVVESVKP 346 (351)
Q Consensus 276 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~v~vw~~~~ 346 (351)
.|..||... +. ...+. |...+.+++|+|+|+.++++++.+ +.|++||+..
T Consensus 379 ~~~~~l~~~d~~~-------------------~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 379 PLERHFYCIDIKG-------------------GK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp TTCBEEEEEETTC-------------------CC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred CceEEEEEEEcCC-------------------CC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 566666655 33 23332 556689999999999444444433 5699999864
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=3e-23 Score=177.94 Aligned_cols=270 Identities=11% Similarity=0.075 Sum_probs=193.3
Q ss_pred eecCCCCcceEEEeeeeeC---CCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEE
Q 018697 21 DVKADTDHTSFLTGTLSLK---EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQ 97 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~ 97 (351)
.+.++++..+++++..... .++.+.+|+.... ... ..+ .....+..++|+|+++.++++ ...++.|.+||
T Consensus 45 ~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~--~~~-~~~-~~~~~~~~~~~s~dg~~l~v~---~~~~~~v~~~d 117 (353)
T 3vgz_A 45 EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL--EVT-QAI-HNDLKPFGATINNTTQTLWFG---NTVNSAVTAID 117 (353)
T ss_dssp EEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC--CEE-EEE-EESSCCCSEEEETTTTEEEEE---ETTTTEEEEEE
T ss_pred ceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC--eEE-EEE-ecCCCcceEEECCCCCEEEEE---ecCCCEEEEEe
Confidence 4566778777877653221 1456776665543 222 222 234568899999999987776 36778999999
Q ss_pred cccccCCCCCCcceeeeeeecccc---------ceeEEEecCCCCCcEEEE-ecCCcEEEEEcCCCCCCcccccccccCc
Q 018697 98 IPELYGQLNSPQLERIAALDAHVG---------KINCVLWWSSGRHDKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~~~~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 167 (351)
.. +.+.+..+..+.. .+.+++|+|+++.++++. +.++.|.+||+.++.....+. .+
T Consensus 118 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~ 183 (353)
T 3vgz_A 118 AK---------TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-----NT 183 (353)
T ss_dssp TT---------TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-----CC
T ss_pred CC---------CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-----CC
Confidence 87 5566666655432 278899999999645554 357899999998654332221 11
Q ss_pred ccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeec-----ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccC
Q 018697 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH-----AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241 (351)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 241 (351)
...+.+++|+|+++.+++++.++.|.+||+.+++....+.. .+ +..++|+|+++.++++...++.|.+||+.+
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~- 262 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN- 262 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT-
T ss_pred CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC-
Confidence 22578899999999999999999999999999887766653 22 788999999996666666679999999987
Q ss_pred CcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEE
Q 018697 242 KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLA 321 (351)
Q Consensus 242 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 321 (351)
.+.+..+.... ...++|+|++..++++...++.|.+||..+ ++.+..+.... .+.+++
T Consensus 263 ~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-------------------~~~~~~~~~~~-~~~~~~ 320 (353)
T 3vgz_A 263 GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS-------------------YKVVKTFDTPT-HPNSLA 320 (353)
T ss_dssp CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT-------------------TEEEEEEECCS-EEEEEE
T ss_pred CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC-------------------CeEEEEEecCC-CCCeEE
Confidence 55666666433 267999999933555555799999999988 77777665543 579999
Q ss_pred eCCCCCceEEEee
Q 018697 322 WSSREPWIFASLS 334 (351)
Q Consensus 322 ~~~~~~~~l~s~~ 334 (351)
|+|+++.++++..
T Consensus 321 ~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 321 LSADGKTLYVSVK 333 (353)
T ss_dssp ECTTSCEEEEEEE
T ss_pred EcCCCCEEEEEEc
Confidence 9999994444443
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=2.1e-23 Score=174.01 Aligned_cols=223 Identities=11% Similarity=0.068 Sum_probs=164.5
Q ss_pred cCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCC-CCCCccccccccc
Q 018697 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDC-SNKNAQVQSKQSS 165 (351)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~ 165 (351)
++.++.|++||+. ..+.. .+..|...|.+++|+|+++. ++.+.++.|++||+.+ +... ......
T Consensus 18 ~~~~~~i~~~d~~---------~~~~~-~~~~~~~~v~~~~~spdg~~--l~~~~~~~i~~~d~~~~~~~~-~~~~~~-- 82 (297)
T 2ojh_A 18 GSMRSSIEIFNIR---------TRKMR-VVWQTPELFEAPNWSPDGKY--LLLNSEGLLYRLSLAGDPSPE-KVDTGF-- 82 (297)
T ss_dssp CCCCEEEEEEETT---------TTEEE-EEEEESSCCEEEEECTTSSE--EEEEETTEEEEEESSSCCSCE-ECCCTT--
T ss_pred CCcceeEEEEeCC---------CCcee-eeccCCcceEeeEECCCCCE--EEEEcCCeEEEEeCCCCCCce-Eecccc--
Confidence 4678999999987 33433 45578899999999999994 4444588999999986 4332 222111
Q ss_pred CcccceeeeEECCCCCcEEEee--cCCeEEEEEc--ccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEeccc
Q 018697 166 GMLHYLSGGAWDPHDVNAVAAT--CESSVQFWDL--RSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~--~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (351)
+...+.+++|+|+++.|++++ .++...+|.+ .+++ ...+.... +..++|+|+++.+++++..++.+++|+++.
T Consensus 83 -~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 83 -ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp -CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred -ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 234788999999999999988 3345555554 4443 33333233 888999999996565888899999999765
Q ss_pred CCcceeEeeCCCCceeEEEecCCCCCeEEEee-CCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEE
Q 018697 241 LKAPIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG 319 (351)
Q Consensus 241 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 319 (351)
.......+..+...+.+++|+|++ .+|+.++ .++.+++|++... ...+..+..|...+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~~~~------------------~~~~~~~~~~~~~~~~ 221 (297)
T 2ojh_A 161 DSGVETRLTHGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIWRVRVD------------------GSSVERITDSAYGDWF 221 (297)
T ss_dssp TTCCEEECCCSSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETT------------------SSCEEECCCCSEEEEE
T ss_pred CCCcceEcccCCCccccceECCCC-CEEEEEecCCCCccEEEECCC------------------CCCcEEEecCCcccCC
Confidence 444566777788899999999999 6666554 6899999998731 4556667777788999
Q ss_pred EEeCCCCCceEEEeeeC-----------CeEEEeecCc
Q 018697 320 LAWSSREPWIFASLSYD-----------GRVVVESVKP 346 (351)
Q Consensus 320 ~~~~~~~~~~l~s~~~d-----------g~v~vw~~~~ 346 (351)
++|+|+++ +|+.++.+ +.|++||+..
T Consensus 222 ~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 222 PHPSPSGD-KVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEECTTSS-EEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred eEECCCCC-EEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 99999999 66666654 5699999875
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=9.8e-24 Score=179.66 Aligned_cols=262 Identities=9% Similarity=0.047 Sum_probs=184.8
Q ss_pred CCCEEEEEEeCCCCCeEEEEeeecCCc-ceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec
Q 018697 40 EENEVHLLRLSSGGTELICEGLFSHPN-EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA 118 (351)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~-~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 118 (351)
.++.+.+|++... ........++.. .+..++|+|+++.++++ +..++.|.+||+. +.+.+..+..
T Consensus 9 ~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~---~~~~~~v~~~d~~---------~~~~~~~~~~ 74 (337)
T 1pby_B 9 RPDKLVVIDTEKM--AVDKVITIADAGPTPMVPMVAPGGRIAYAT---VNKSESLVKIDLV---------TGETLGRIDL 74 (337)
T ss_dssp TTTEEEEEETTTT--EEEEEEECTTCTTCCCCEEECTTSSEEEEE---ETTTTEEEEEETT---------TCCEEEEEEC
T ss_pred CCCeEEEEECCCC--cEEEEEEcCCCCCCccceEEcCCCCEEEEE---eCCCCeEEEEECC---------CCCeEeeEEc
Confidence 5788988887643 222222122222 58899999999888776 3678899999987 4455554432
Q ss_pred -----cccceeEEEecCCCCCcEEEEe-----------cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCc
Q 018697 119 -----HVGKINCVLWWSSGRHDKLVSI-----------DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182 (351)
Q Consensus 119 -----h~~~v~~~~~~~~~~~~~~~~~-----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 182 (351)
|...+.+++|+|+++.++++.. .++.|.+||+.++.....+.. ...+.+++|+|++++
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA------PRQITMLAWARDGSK 148 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC------CSSCCCEEECTTSSC
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC------CCCcceeEECCCCCE
Confidence 1236788999999986333321 479999999986433222211 125788999999998
Q ss_pred EEEeecCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCC-----------------------eEEEEec
Q 018697 183 AVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADES-----------------------GIHLWDL 238 (351)
Q Consensus 183 l~~~~~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg-----------------------~i~i~d~ 238 (351)
++++ ++.|.+||+.+++....+.... ...+.|+|++..+++++..++ .|.+||+
T Consensus 149 l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 149 LYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp EEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred EEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 8887 6889999999887766555333 234588999985544444444 4689999
Q ss_pred ccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEE
Q 018697 239 RMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVY 318 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (351)
++.......+..+...+.+++|+|++ .+++++ ++.|.+||+.. ++.+..+..+ ..+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~-------------------~~~~~~~~~~-~~~~ 283 (337)
T 1pby_B 227 ETGEMAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEK-------------------NASIKRVPLP-HSYY 283 (337)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTT-------------------TEEEEEEECS-SCCC
T ss_pred CCCCceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEEECCC-------------------CcCcceecCC-Ccee
Confidence 87332223344566778899999999 888877 78999999987 6666666543 3578
Q ss_pred EEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 319 GLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 319 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
+++|+|+++ .+++++.++.|++||+.+.
T Consensus 284 ~~~~s~dg~-~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 284 SVNVSTDGS-TVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EEEECTTSC-EEEEESBSSEEEEEETTTC
T ss_pred eEEECCCCC-EEEEEcCCCcEEEEECcCC
Confidence 999999999 6667788999999998753
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=6.4e-23 Score=175.88 Aligned_cols=250 Identities=9% Similarity=0.001 Sum_probs=184.5
Q ss_pred CCcceeeeeeCCCCCceEEEEeecC---CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEe
Q 018697 64 HPNEIWDLSSCPFDQRIFSTVFSTG---ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI 140 (351)
Q Consensus 64 h~~~v~~i~~~~~~~~l~~~~~~~~---~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 140 (351)
....+..++|+|+++.++++...+. .++.|.+||.. +.+.+..+.. ...+..++|+|+++.++++..
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~---------~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~ 108 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPV---------TLEVTQAIHN-DLKPFGATINNTTQTLWFGNT 108 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTT---------TCCEEEEEEE-SSCCCSEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCC---------CCeEEEEEec-CCCcceEEECCCCCEEEEEec
Confidence 4457889999999998887741111 27789999987 5566666643 345788999999996555556
Q ss_pred cCCcEEEEEcCCCCCCccccccccc----CcccceeeeEECCCCCcEEEee--cCCeEEEEEcccCCcCceee-cce-eE
Q 018697 141 DEENIFLWSLDCSNKNAQVQSKQSS----GMLHYLSGGAWDPHDVNAVAAT--CESSVQFWDLRSMGKTNSIE-HAH-VR 212 (351)
Q Consensus 141 ~d~~v~iwd~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~-~~~-v~ 212 (351)
.++.|.+||+.++.....+...... .....+.+++|+|+++.+++++ .++.|.+||+.+++....+. .+. +.
T Consensus 109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST 188 (353)
T ss_dssp TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC
T ss_pred CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc
Confidence 6899999999876543332221100 0001268899999999888776 47899999999988777776 333 88
Q ss_pred EEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC----CCCceeEEEecCCCCCeEEE-eeCCCeEEEEEcCCCCC
Q 018697 213 NVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG----HTHWTWAVCCNPEYDGFILS-AGTDSTVNLWLVSTSNH 287 (351)
Q Consensus 213 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~ 287 (351)
.++|+|+++ .+++++.++.|.+||+.+ .+.+..+.. +...+..++|+|++ .+++. ...++.|.+||..+
T Consensus 189 ~~~~s~dg~-~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~--- 262 (353)
T 3vgz_A 189 GLALDSEGK-RLYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTAR-QRAFITDSKAAEVLVVDTRN--- 262 (353)
T ss_dssp CCEEETTTT-EEEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTT-TEEEEEESSSSEEEEEETTT---
T ss_pred eEEECCCCC-EEEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCC-CEEEEEeCCCCEEEEEECCC---
Confidence 999999998 677788899999999987 556666553 45568889999999 65554 44569999999988
Q ss_pred CCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 288 DELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++.+..+.... ...++|+|+++.++++...++.|.+||+.+.
T Consensus 263 ----------------~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 263 ----------------GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp ----------------CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ----------------CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 66666665433 2579999999866666668999999998753
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=2e-22 Score=189.73 Aligned_cols=281 Identities=11% Similarity=0.038 Sum_probs=197.8
Q ss_pred eeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEc
Q 018697 19 ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (351)
+..+.++|++..++++.. +.|++|++...... ....+..|...+..++|+|+|+.|+.+ .++.|.+|++
T Consensus 111 v~~~~~SpDg~~l~~~~~-----~~i~~~d~~~~~~~-~~~~l~~~~~~~~~~~~SPDG~~la~~-----~~~~i~~~d~ 179 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-----GELYLYDLKQEGKA-AVRQLTHGEGFATDAKLSPKGGFVSFI-----RGRNLWVIDL 179 (741)
T ss_dssp SCCCEECTTSSEEEEEET-----TEEEEEESSSCSTT-SCCBCCCSSSCEEEEEECTTSSEEEEE-----ETTEEEEEET
T ss_pred cceeEECCCCCEEEEEeC-----CcEEEEECCCCCcc-eEEEcccCCcccccccCCCCCCEEEEE-----eCCcEEEEec
Confidence 566778999999988753 88999998764100 123456788899999999999998886 3568999998
Q ss_pred ccccCCCCCCcceeeeeeeccccc----------------eeEEEecCCCCCcEEEEecCC-------------------
Q 018697 99 PELYGQLNSPQLERIAALDAHVGK----------------INCVLWWSSGRHDKLVSIDEE------------------- 143 (351)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~h~~~----------------v~~~~~~~~~~~~~~~~~~d~------------------- 143 (351)
. ..+.......+... +.+++|+|||+. +++++.|+
T Consensus 180 ~---------~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 180 A---------SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp T---------TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred C---------CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccce
Confidence 7 33433333333322 478999999997 44444333
Q ss_pred --------------cEEEEEcCC-CCCCcccccccccCcccceeeeEECCCCCcEEEeec-----CCeEEEEEcccCCcC
Q 018697 144 --------------NIFLWSLDC-SNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-----ESSVQFWDLRSMGKT 203 (351)
Q Consensus 144 --------------~v~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~ 203 (351)
.|++||+.+ +... .+... ..+...+..++| ||++.|++++. +..|++||+.+++..
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~-~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQTQ-WIDLG--KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR 325 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCCE-EECCC--SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCceE-EecCC--CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE
Confidence 788889876 5422 22111 135568999999 99999987753 578999999988765
Q ss_pred ceeecce------eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEE-EecCCCCCeEEEeeCCC-
Q 018697 204 NSIEHAH------VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAV-CCNPEYDGFILSAGTDS- 275 (351)
Q Consensus 204 ~~~~~~~------v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~s~~~dg- 275 (351)
..+.... +..++|+|+|+ ++++++.++.++||.+...+. ...+..|...+..+ .|+|+++.++++++.++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~ 403 (741)
T 2ecf_A 326 VLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESA 403 (741)
T ss_dssp EEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCT
T ss_pred EEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCC
Confidence 5544211 35899999999 888899999888887764344 77777888888887 59999933445666666
Q ss_pred -eEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeC---CeEEEeecC
Q 018697 276 -TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD---GRVVVESVK 345 (351)
Q Consensus 276 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~v~vw~~~ 345 (351)
.++||++... +.....+.. ...+..++|+|+++.++++.+.. ..+.+|+..
T Consensus 404 ~~~~l~~~~~~------------------g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 404 RESQIYAVPLQ------------------GGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp TCBEEEEEETT------------------CCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred ceEEEEEEEcC------------------CCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 8999998741 333444544 45678999999999555554443 457888764
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=3.2e-22 Score=170.70 Aligned_cols=248 Identities=11% Similarity=0.156 Sum_probs=167.0
Q ss_pred eecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEccc
Q 018697 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPE 100 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~ 100 (351)
.+.+++++..++++.. .++.+.+|++....+.+...........+..++|+|+++.++++ +..++.|.+|++..
T Consensus 42 ~~~~spdg~~l~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~~~~i~~~d~~~ 115 (343)
T 1ri6_A 42 PMVVSPDKRYLYVGVR---PEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVG---SYNAGNVSVTRLED 115 (343)
T ss_dssp CEEECTTSSEEEEEET---TTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEE---ETTTTEEEEEEEET
T ss_pred eEEECCCCCEEEEeec---CCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEE---ecCCCeEEEEECCC
Confidence 4557778777777642 34899999998544443322222233488999999999988876 35688999999841
Q ss_pred ccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccc-ccccCcccceeeeEECCC
Q 018697 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS-KQSSGMLHYLSGGAWDPH 179 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~ 179 (351)
....+....+..+ ..+.+++|+|+++.+++++..++.|.+||+.+......... .........+.+++|+|+
T Consensus 116 ------~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 116 ------GLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp ------TEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred ------CccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC
Confidence 0033455555433 45889999999986443334789999999986332221110 000111236788999999
Q ss_pred CCcEEEee-cCCeEEEEEccc--CCcC--cee---ecc----e-eEEEEcCCCCCcEEEEecCCCeEEEEecccC---Cc
Q 018697 180 DVNAVAAT-CESSVQFWDLRS--MGKT--NSI---EHA----H-VRNVDYDTKKKHLLVTAADESGIHLWDLRML---KA 243 (351)
Q Consensus 180 ~~~l~~~~-~d~~i~iwd~~~--~~~~--~~~---~~~----~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~ 243 (351)
++++++++ .++.|.+||+.. ++.. ..+ ... . +..++|+|+++++++++..++.|.+||+... .+
T Consensus 189 g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~ 268 (343)
T 1ri6_A 189 EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 268 (343)
T ss_dssp SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE
Confidence 99887665 789999999964 3221 111 111 1 6689999999866667778999999999831 22
Q ss_pred ceeEeeCCCCceeEEEecCCCCCeEEEee-CCCeEEEEEcC
Q 018697 244 PIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVS 283 (351)
Q Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~ 283 (351)
.+..+..+.. +..++|+|++ .+|++++ .++.|.+|++.
T Consensus 269 ~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 269 KEGFQPTETQ-PRGFNVDHSG-KYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEECSSS-CCCEEECTTS-SEEEEECTTTCEEEEEEEE
T ss_pred EeeeecCCCc-cceEEECCCC-CEEEEecCCCCeEEEEEEc
Confidence 3444554444 8899999999 7666666 68999999665
No 145
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=2.8e-22 Score=172.86 Aligned_cols=282 Identities=11% Similarity=0.044 Sum_probs=181.1
Q ss_pred ceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeee--cCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCC
Q 018697 29 TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLF--SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLN 106 (351)
Q Consensus 29 ~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~ 106 (351)
..+++|+.+. .+.|++++++...+.+...... .....+..++|+|+++.|+++ +.+ .|.+|++..
T Consensus 3 ~~~~vg~~~~--~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~----~~~-~v~~~~~~~------ 69 (365)
T 1jof_A 3 HHLMIGTWTP--PGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGA----AMK-KWSSFAVKS------ 69 (365)
T ss_dssp EEEEEEESSS--SCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEE----EBT-EEEEEEEEE------
T ss_pred EEEEEEEccC--CCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEE----ccc-eEEEEEECC------
Confidence 4577887642 2579999998776655433222 344578899999999988776 344 899999851
Q ss_pred CCcceeeeeee--ccccceeEEEecCCCCCcEEE-Ee-------------cCCcEEEEEcCCCCCCcccccccccCcccc
Q 018697 107 SPQLERIAALD--AHVGKINCVLWWSSGRHDKLV-SI-------------DEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (351)
Q Consensus 107 ~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~-~~-------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 170 (351)
.++...... .+ +.+.+++|+|+++.++++ +. .++.+.+|++................+...
T Consensus 70 --~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~ 146 (365)
T 1jof_A 70 --PTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTG 146 (365)
T ss_dssp --TTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCC
T ss_pred --CCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCc
Confidence 123222221 11 235668999999853333 22 589999999974332222111100012346
Q ss_pred eeeeEECCCCCcEEEee-cCCeEEEEEcc-cCCcC--ceee--c-ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccC-
Q 018697 171 LSGGAWDPHDVNAVAAT-CESSVQFWDLR-SMGKT--NSIE--H-AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML- 241 (351)
Q Consensus 171 v~~~~~~~~~~~l~~~~-~d~~i~iwd~~-~~~~~--~~~~--~-~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~- 241 (351)
+.+++|+|++++++++. .++.|++||+. +++.. ..+. . +. +..++|+|+|++++++...++.|.+|++...
T Consensus 147 ~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence 88999999999888765 46899999998 66542 2232 1 23 8999999999944444445789999987531
Q ss_pred Ccce---eEee-------CCCC------ceeEEE-ecCCCCCeEEEeeCC-C-----eEEEEEcCCCCCCCCCCcccccC
Q 018697 242 KAPI---QELP-------GHTH------WTWAVC-CNPEYDGFILSAGTD-S-----TVNLWLVSTSNHDELPSESLVES 298 (351)
Q Consensus 242 ~~~~---~~~~-------~~~~------~v~~~~-~~~~~~~~l~s~~~d-g-----~i~iwd~~~~~~~~~~~~~~~~~ 298 (351)
++.. ..+. +|.. .+..++ |+|+| ++|+++..+ . .|.+|++...
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~~~~~~~~i~v~~~~~~------------- 292 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRANKFELQGYIAGFKLRDC------------- 292 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEESSTTSCCEEEEEEECTT-------------
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CEEEEECCCCCCCCCCeEEEEEECCC-------------
Confidence 2221 1222 1222 588999 99999 777666542 3 8999999630
Q ss_pred Ccccccccce---eeccccceEEEEEeCC---CCCceEEEeee-CCeEEEeecCc
Q 018697 299 PNQRANSLLN---SYSDYEDSVYGLAWSS---REPWIFASLSY-DGRVVVESVKP 346 (351)
Q Consensus 299 ~~~~~~~~~~---~~~~~~~~v~~~~~~~---~~~~~l~s~~~-dg~v~vw~~~~ 346 (351)
++... ....+...+..++|+| +|+ +|++++. ++.|.+|+++.
T Consensus 293 -----g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~-~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 293 -----GSIEKQLFLSPTPTSGGHSNAVSPCPWSDE-WMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp -----SCEEEEEEEEECSSCCTTCCCEEECTTCTT-EEEEECSSSCEEEEEEEET
T ss_pred -----CCEEEeeeeeecCCCCcccceecCCCcCCC-EEEEEEcCCCeEEEEEEch
Confidence 33322 1223444567899999 788 5666654 59999998854
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.5e-22 Score=189.63 Aligned_cols=241 Identities=12% Similarity=0.114 Sum_probs=169.8
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v 145 (351)
..|.+++|+|+ +.++++ .++.|++||+. ..+. ..+..+...+.+++|+|+|+. ++...++.|
T Consensus 82 ~~v~~~~~spd-~~~~~~-----~~~~i~~~d~~---------~~~~-~~l~~~~~~~~~~~~SpdG~~--la~~~~~~i 143 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-----TQGGLVGFDML---------ARKV-TYLFDTNEETASLDFSPVGDR--VAYVRNHNL 143 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-----ETTEEEEEETT---------TTEE-EEEECCTTCCTTCEECTTSSE--EEEEETTEE
T ss_pred cCceeEEECCC-CeEEEE-----ECCEEEEEECC---------CCce-EEccCCcccccCCcCCCCCCE--EEEEECCeE
Confidence 46999999999 676664 35899999987 3333 344466778899999999994 444568999
Q ss_pred EEEEcCC-----CCCCccccccccc----------CcccceeeeEECCCCCcEEEee-----------------------
Q 018697 146 FLWSLDC-----SNKNAQVQSKQSS----------GMLHYLSGGAWDPHDVNAVAAT----------------------- 187 (351)
Q Consensus 146 ~iwd~~~-----~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~----------------------- 187 (351)
++||+.+ +.... +...... .+...+.+++|+||+++|++++
T Consensus 144 ~v~~~~~~~~~~g~~~~-~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 144 YIARGGKLGEGMSRAIA-VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp EEEECBCTTSCCCCCEE-SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred EEEecCcccccCCCcEE-eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 9999987 44322 1111100 0011258899999999999887
Q ss_pred ----------cCCeEEEEEcccCCcCceeec-c--e-eEEEEcCCCCCcEEEEecCCC-----eEEEEecccCCcceeEe
Q 018697 188 ----------CESSVQFWDLRSMGKTNSIEH-A--H-VRNVDYDTKKKHLLVTAADES-----GIHLWDLRMLKAPIQEL 248 (351)
Q Consensus 188 ----------~d~~i~iwd~~~~~~~~~~~~-~--~-v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~ 248 (351)
.+..|++||+.+++....... . . +.+++|+|+|+ .+++++.++ .|++||+.+ ++....+
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~-g~~~~~~ 300 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAET-GRFVRTL 300 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTT-CCEEEEE
T ss_pred eeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCC-CceeeEE
Confidence 346899999988764333321 2 2 89999999998 566666554 899999987 4223332
Q ss_pred e--CCCC---ceeEEEecC--CCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEE-E
Q 018697 249 P--GHTH---WTWAVCCNP--EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG-L 320 (351)
Q Consensus 249 ~--~~~~---~v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~ 320 (351)
. .+.. .+..++|+| +| .++++++.|+.++||++.. .+..+..+..|...+.. +
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~------------------~~~~~~~l~~~~~~v~~~~ 361 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDT------------------TGRLIRQVTKGEWEVTNFA 361 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEET------------------TSCEEEECCCSSSCEEEEE
T ss_pred EEccCCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEEC------------------CCCEEEecCCCCeEEEeee
Confidence 2 2222 346789999 99 8999999999999998873 15556667777777876 7
Q ss_pred EeCCCCCceEEEeeeCC----eEEEeecCc
Q 018697 321 AWSSREPWIFASLSYDG----RVVVESVKP 346 (351)
Q Consensus 321 ~~~~~~~~~l~s~~~dg----~v~vw~~~~ 346 (351)
+|+|+++.++++++.++ .|..|++..
T Consensus 362 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 362 GFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp EECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred EEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 99999985556666655 666666643
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=7.5e-23 Score=187.42 Aligned_cols=233 Identities=9% Similarity=-0.010 Sum_probs=169.0
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccc-cceeEEEecCCCCCcEEEEec--
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV-GKINCVLWWSSGRHDKLVSID-- 141 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~-- 141 (351)
..+|++++|+|||+.|+.+. ..|++++||++. ..+. ..+..|. ..+..++|+|+ + +++++..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s---~~~g~~~lw~~~---------~g~~-~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~ 85 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVG---FSEGSVNAYLYD---------GGET-VKLNREPINSVLDPHYGVG-R-VILVRDVSK 85 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEE---EETTEEEEEEEE---------TTEE-EECCSSCCSEECEECTTCS-E-EEEEEECST
T ss_pred ccchheeecCCCCCeEEEEE---ccCCceeEEEEc---------CCCc-EeeecccccccccccCCCC-e-EEEEeccCC
Confidence 45799999999999998862 348999999986 3344 3444555 68999999999 4 3554443
Q ss_pred -CCcEEEEEcCC--CCCCcccccccccCcccceeeeEECCCCCcE-EEeecCCeEEEEEcccCCcCceeecceeEEEEcC
Q 018697 142 -EENIFLWSLDC--SNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA-VAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYD 217 (351)
Q Consensus 142 -d~~v~iwd~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~v~~~~~~ 217 (351)
+....+|.++. ......+.... .+...+|+|+++.+ ++.+.++.+.+||+.+++........ ..+++|+
T Consensus 86 g~~~~~l~~~~~~~~g~~~~l~~~~------~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~~~~~~s 158 (582)
T 3o4h_A 86 GAEQHALFKVNTSRPGEEQRLEAVK------PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-GFGFVSD 158 (582)
T ss_dssp TSCCEEEEEEETTSTTCCEECTTSC------SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-SCEEEEE
T ss_pred CCcceEEEEEeccCCCccccccCCC------CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-CceEEEC
Confidence 45566666543 22222222111 23456888888654 34444555669999987654433322 4789999
Q ss_pred CCCCcEEEEecCC----CeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCC--eEEEEEcCCCCCCCCC
Q 018697 218 TKKKHLLVTAADE----SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS--TVNLWLVSTSNHDELP 291 (351)
Q Consensus 218 ~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~ 291 (351)
|||+ .+++++.+ +.|++||+.+ ++ ...+..|...+..++|+||| +.|+++..++ .|++||+..
T Consensus 159 pDG~-~la~~~~~~~~~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~d~~~------- 227 (582)
T 3o4h_A 159 IRGD-LIAGLGFFGGGRVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTVDPRD------- 227 (582)
T ss_dssp EETT-EEEEEEEEETTEEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEECTTT-------
T ss_pred CCCC-EEEEEEEcCCCCeEEEEEcCCC-CC-ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEEEcCCC-------
Confidence 9999 67766655 7899999886 43 45777888899999999999 8888888888 899999987
Q ss_pred CcccccCCcccccccceeeccccceEEEEE--------eCCCCCceEEEeeeCCeEEEeec
Q 018697 292 SESLVESPNQRANSLLNSYSDYEDSVYGLA--------WSSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
++.. .+..|...+..++ |+|||. ++++++.|+.+++|++
T Consensus 228 ------------~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 228 ------------GSVE-DLELPSKDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID 274 (582)
T ss_dssp ------------CCEE-ECCCSCSHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET
T ss_pred ------------CcEE-EccCCCcChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE
Confidence 5555 5666666666677 999995 9999999999999998
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=6.8e-23 Score=180.24 Aligned_cols=204 Identities=11% Similarity=0.088 Sum_probs=145.1
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCC-------cccc---cccccCcccceeeeEECCCCCcEE----E
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN-------AQVQ---SKQSSGMLHYLSGGAWDPHDVNAV----A 185 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~-------~~~~---~~~~~~~~~~v~~~~~~~~~~~l~----~ 185 (351)
...+..+++++++.. +++++.++ +++|+....... .... ......+...|.+++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~~~~-l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGL-VFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTE-EEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCE-EEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 345788999998883 55556666 999876421100 0000 000112344799999999999999 6
Q ss_pred eecCCeEEEEEcccC--------CcCceee--cce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCC
Q 018697 186 ATCESSVQFWDLRSM--------GKTNSIE--HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT 252 (351)
Q Consensus 186 ~~~d~~i~iwd~~~~--------~~~~~~~--~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 252 (351)
++.|+.|++||++++ +.+..+. .+| |.+++|+|+...+|++++.||+|++||+++ ...+....+|.
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~-~~~~~~~~~~~ 192 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE-TVKVCATLPST 192 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS-SEEEEEEECGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC-CcceeeccCCC
Confidence 778999999999865 2222222 234 999999998444899999999999999997 45555666789
Q ss_pred CceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeec-------cccceEEEEEeCCC
Q 018697 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-------DYEDSVYGLAWSSR 325 (351)
Q Consensus 253 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~ 325 (351)
..|.+++|+|+| .+|++|+.||.|++||.+. +....+. .|...|.+++|+++
T Consensus 193 ~~v~~v~wspdg-~~lasgs~dg~v~iwd~~~--------------------~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 193 VAVTSVCWSPKG-KQLAVGKQNGTVVQYLPTL--------------------QEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp GCEEEEEECTTS-SCEEEEETTSCEEEECTTC--------------------CEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred CceeEEEEcCCC-CEEEEEcCCCcEEEEccCC--------------------cccccccCCcccCCCCceeEEEEEEecC
Confidence 999999999999 9999999999999999973 1111221 23458999999998
Q ss_pred CCceEEEeeeCC------eEEEeecCcc
Q 018697 326 EPWIFASLSYDG------RVVVESVKPF 347 (351)
Q Consensus 326 ~~~~l~s~~~dg------~v~vw~~~~~ 347 (351)
+..+++....|| .+++|++.+.
T Consensus 252 ~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 252 YVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ceEEEEEccCCCccCCCCceEEEEeccC
Confidence 873334444453 3899998753
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=2.1e-22 Score=189.11 Aligned_cols=237 Identities=11% Similarity=0.023 Sum_probs=167.7
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecccc---ceeEEEecCCCCCcEEEEec-
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG---KINCVLWWSSGRHDKLVSID- 141 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~~- 141 (351)
..+.+++|+|+++.+++ +.|+.|++||+. +++....+..|.. .|.+++|+|||+. +++++.
T Consensus 17 ~~~~~~~~spdg~~~~~-----~~dg~i~~~d~~---------~g~~~~~~~~~~~~~~~v~~~~~SpDg~~-l~~~~~~ 81 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-----EQKGTVRLWNVE---------TNTSTVLIEGKKIESLRAIRYEISPDREY-ALFSYNV 81 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-----CSSSCEEEBCGG---------GCCCEEEECTTTTTTTTCSEEEECTTSSE-EEEEESC
T ss_pred ccccccEEcCCCcEEEE-----eCCCCEEEEECC---------CCcEEEEeccccccccccceEEECCCCCE-EEEEecC
Confidence 35778999999986543 578999999998 5555566666654 4999999999996 444443
Q ss_pred --------CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce--e
Q 018697 142 --------EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--V 211 (351)
Q Consensus 142 --------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--v 211 (351)
++.+++||+.++.. ..+. ...++...+..++|+|||+.|+.++. +.|++||+.+++......... +
T Consensus 82 ~~~~~~~~~~~i~~~d~~~~~~-~~l~--~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~ 157 (723)
T 1xfd_A 82 EPIYQHSYTGYYVLSKIPHGDP-QSLD--PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGV 157 (723)
T ss_dssp CCCSSSCCCSEEEEEESSSCCC-EECC--CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTT
T ss_pred ccceeecceeeEEEEECCCCce-Eecc--CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCc
Confidence 27899999987543 2221 11234445889999999999998875 799999999877654443222 3
Q ss_pred ------------------EEEEcCCCCCcEEEEecCCC----------------------------------eEEEEecc
Q 018697 212 ------------------RNVDYDTKKKHLLVTAADES----------------------------------GIHLWDLR 239 (351)
Q Consensus 212 ------------------~~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~ 239 (351)
.+++|+|||+ .|++++.++ .|++||+.
T Consensus 158 ~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~ 236 (723)
T 1xfd_A 158 IYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN 236 (723)
T ss_dssp EEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS
T ss_pred eECcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC
Confidence 6899999999 566655332 79999998
Q ss_pred cCCcceeEeeCC------CCceeEEEecCCCCCeEEEeeC----CCeEEEEEcCCCCCCCCCCcccccCCccccccccee
Q 018697 240 MLKAPIQELPGH------THWTWAVCCNPEYDGFILSAGT----DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNS 309 (351)
Q Consensus 240 ~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (351)
. ++....+..+ ...+..++|+|+| +++++... +..|++||+.+ ++....
T Consensus 237 ~-~~~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~-------------------g~~~~~ 295 (723)
T 1xfd_A 237 G-PTHDLEMMPPDDPRMREYYITMVKWATST-KVAVTWLNRAQNVSILTLCDATT-------------------GVCTKK 295 (723)
T ss_dssp S-SCCCEECCCCCCGGGSSEEEEEEEESSSS-EEEEEEEETTSCEEEEEEEETTT-------------------CCEEEE
T ss_pred C-CceeEEeeCCccCCCccceeEEEEEeCCC-eEEEEEEcCCCCeEEEEEEeCCC-------------------CcceEE
Confidence 6 4444555544 5678999999999 77766543 35799999987 555544
Q ss_pred ecc-ccceE----EEEEeCCCCCceEEE-eeeCC------eEEEee
Q 018697 310 YSD-YEDSV----YGLAWSSREPWIFAS-LSYDG------RVVVES 343 (351)
Q Consensus 310 ~~~-~~~~v----~~~~~~~~~~~~l~s-~~~dg------~v~vw~ 343 (351)
+.. +...+ ..++|+|+|+.+++. ...++ .|.+|+
T Consensus 296 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 296 HEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp EEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred EEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 433 23333 378999999954444 45677 566676
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=7.8e-22 Score=168.77 Aligned_cols=236 Identities=9% Similarity=0.017 Sum_probs=166.9
Q ss_pred eeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccc-cceeEEEecCCCCCcEEEEecCCcEEEE
Q 018697 70 DLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLW 148 (351)
Q Consensus 70 ~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~d~~v~iw 148 (351)
.+++++++..+++. +.++.|.+||+. +.+.+..+..+. ..+..++|+|+++.++++...++.|.+|
T Consensus 4 g~~~~~~~~~~v~~----~~~~~v~~~d~~---------~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~ 70 (349)
T 1jmx_B 4 GPALKAGHEYMIVT----NYPNNLHVVDVA---------SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI 70 (349)
T ss_dssp CCCCCTTCEEEEEE----ETTTEEEEEETT---------TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cccccCCCEEEEEe----CCCCeEEEEECC---------CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEE
Confidence 45777777666664 578999999988 556666665443 2578899999998644555678999999
Q ss_pred EcCCCCCCccccccccc-CcccceeeeEECCCCCcEEEeecC------------CeEEEEEcccCCcC---ceeecce-e
Q 018697 149 SLDCSNKNAQVQSKQSS-GMLHYLSGGAWDPHDVNAVAATCE------------SSVQFWDLRSMGKT---NSIEHAH-V 211 (351)
Q Consensus 149 d~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~---~~~~~~~-v 211 (351)
|+.++.....+...... .....+.+++|+|+++++++++.+ +.|.+||+.+++.. ..+.... +
T Consensus 71 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (349)
T 1jmx_B 71 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV 150 (349)
T ss_dssp ETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC
T ss_pred eCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc
Confidence 99865433222211100 002247889999999999988865 89999999985433 3333223 8
Q ss_pred EEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCC---------------------------------------
Q 018697 212 RNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT--------------------------------------- 252 (351)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------------------------------------- 252 (351)
.+++|+|+++ +++ ++. .|++||+.+ .+.+..+..+.
T Consensus 151 ~~~~~s~dg~-l~~-~~~--~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 225 (349)
T 1jmx_B 151 YLMRAADDGS-LYV-AGP--DIYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD 225 (349)
T ss_dssp CCEEECTTSC-EEE-ESS--SEEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC------
T ss_pred cceeECCCCc-EEE-ccC--cEEEEeCCC-CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCC
Confidence 8999999998 665 433 499999986 44444443221
Q ss_pred -----------------------------CceeEEEecC-CCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccc
Q 018697 253 -----------------------------HWTWAVCCNP-EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQR 302 (351)
Q Consensus 253 -----------------------------~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (351)
..+..++|+| ++ .+++++ ++.|.+||+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~------------------ 284 (349)
T 1jmx_B 226 PATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQ------------------ 284 (349)
T ss_dssp -CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTT------------------
T ss_pred ccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECcc------------------
Confidence 1345677889 98 788777 88999999988
Q ss_pred ccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 303 ANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 303 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++.+..+... ..+.+++|+|+++ .|++++.++.|++||+.+.
T Consensus 285 -~~~~~~~~~~-~~~~~~~~s~dg~-~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 285 -RKLIKAANLD-HTYYCVAFDKKGD-KLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp -TEEEEEEECS-SCCCEEEECSSSS-CEEEESBSSEEEEEETTTT
T ss_pred -CeEEEEEcCC-CCccceEECCCCC-EEEEecCCCeEEEEecccc
Confidence 6666666433 3478999999998 5666788899999999754
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=2e-21 Score=182.45 Aligned_cols=285 Identities=11% Similarity=0.029 Sum_probs=181.1
Q ss_pred eeeecCCCCcceEEEeeeeeC-----CCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceE
Q 018697 19 ISDVKADTDHTSFLTGTLSLK-----EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGA 93 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i 93 (351)
+..+.++|++.+++.+..... .++.+++|++..... .......+|...+..++|||+|+.|+.+ .++.|
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~-----~~~~i 136 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFI-----FENNI 136 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEE-----ETTEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEE-----ECCeE
Confidence 455678899998888753222 137888998876532 1112223455569999999999999886 23789
Q ss_pred EEEEcccccCCCCCCcceeeeeeeccccc------------------eeEEEecCCCCCcEEEEecC-------------
Q 018697 94 AIWQIPELYGQLNSPQLERIAALDAHVGK------------------INCVLWWSSGRHDKLVSIDE------------- 142 (351)
Q Consensus 94 ~vw~~~~~~~~~~~~~~~~~~~~~~h~~~------------------v~~~~~~~~~~~~~~~~~~d------------- 142 (351)
.+|++. ..+.......+... +.+++|+|||+.+++++..+
T Consensus 137 ~~~~~~---------~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 137 YYCAHV---------GKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp EEESSS---------SSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS
T ss_pred EEEECC---------CCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC
Confidence 999987 33443333333332 37899999999633333221
Q ss_pred --------------------CcEEEEEcCCCCCCcccccc-cccCcccceeeeEECCCCCcEEEeec----CCeEEEEEc
Q 018697 143 --------------------ENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGGAWDPHDVNAVAATC----ESSVQFWDL 197 (351)
Q Consensus 143 --------------------~~v~iwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~ 197 (351)
..|++||+.++.....+... ....+...+..++|+||++.+++... +..|++||+
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 17899999875532222211 11122457899999999998876643 368999999
Q ss_pred ccCCcCceeecce---e----EEEEcCCCCCcEEEE-ecCCC------eEEEEecccCCc--ceeEeeCCCCceeE-EEe
Q 018697 198 RSMGKTNSIEHAH---V----RNVDYDTKKKHLLVT-AADES------GIHLWDLRMLKA--PIQELPGHTHWTWA-VCC 260 (351)
Q Consensus 198 ~~~~~~~~~~~~~---v----~~~~~~~~~~~~l~~-~~~dg------~i~i~d~~~~~~--~~~~~~~~~~~v~~-~~~ 260 (351)
.+++....+...+ + ..++|+|+|+.+++. +..++ .|.+||+...+. ....+..+...+.. ++|
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~ 367 (723)
T 1xfd_A 288 TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAY 367 (723)
T ss_dssp TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEE
T ss_pred CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEE
Confidence 9887655543222 3 388999999965554 55667 566677322232 14455433444544 699
Q ss_pred cCCCCCeEEEee-CC--CeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc---ccceEEEEEeCCCCCceEEEee
Q 018697 261 NPEYDGFILSAG-TD--STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD---YEDSVYGLAWSSREPWIFASLS 334 (351)
Q Consensus 261 ~~~~~~~l~s~~-~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~ 334 (351)
+|+| ..|+..+ .+ +.+++|++.... ......+.. |...+..++|+|+|+.+++..+
T Consensus 368 spdg-~~l~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 368 DEKG-NKIYFLSTEDLPRRRQLYSANTVG-----------------NFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp ETTT-TEEEEEESSSCTTCCEEEEECSST-----------------TCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred cCCC-CEEEEEEcCCCCcceEEEEEeCCC-----------------CCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 9999 6665544 44 789999987511 112222322 5666889999999995555554
Q ss_pred eC
Q 018697 335 YD 336 (351)
Q Consensus 335 ~d 336 (351)
..
T Consensus 430 ~~ 431 (723)
T 1xfd_A 430 GP 431 (723)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=4.2e-22 Score=175.19 Aligned_cols=210 Identities=13% Similarity=0.054 Sum_probs=145.8
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCC----Cc---ceeeeeeeccccceeEEEecCCCCCcEE
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNS----PQ---LERIAALDAHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~----~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 137 (351)
...++.+++++++..++++ +.++ +++|+.......... .. ......+ .+...|.+++|+|+++.+++
T Consensus 36 ~~~~n~lavs~~~~~l~~~----~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav 109 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAG----GASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSA 109 (434)
T ss_dssp CSCCBCEEEETTTTEEEEE----ETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEE
T ss_pred CCCccEEEEecCCCEEEEE----CCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEE
Confidence 4468899999998888875 4565 899886532111000 00 0111122 45678999999999995332
Q ss_pred ---EEecCCcEEEEEcCCC-----CCCccc-ccccccCcccceeeeEECCC-CCcEEEeecCCeEEEEEcccCCcCceee
Q 018697 138 ---VSIDEENIFLWSLDCS-----NKNAQV-QSKQSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIE 207 (351)
Q Consensus 138 ---~~~~d~~v~iwd~~~~-----~~~~~~-~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 207 (351)
+++.|+.|++||+.+. .....+ ......+|...|.+++|+|+ +..|++++.||.|++||++++.......
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~ 189 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL 189 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc
Confidence 3467999999998753 110000 11233467789999999998 6788899999999999999875543333
Q ss_pred c-ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC-------CCceeEEEecCCCCCeEEE-eeCCC--
Q 018697 208 H-AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH-------THWTWAVCCNPEYDGFILS-AGTDS-- 275 (351)
Q Consensus 208 ~-~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s-~~~dg-- 275 (351)
. .. +.+++|+|++. +|++|+.||.|++||++ .+....+..| ...|.+++|++++ .++++ ...||
T Consensus 190 ~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~~~~~~dg~~ 265 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT--LQEKKVIPCPPFYESDHPVRVLDVLWIGTY-VFAIVYAAADGTL 265 (434)
T ss_dssp CGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT--CCEEEEECCCTTCCTTSCEEEEEEEEEETT-EEEEEEEETTCCS
T ss_pred CCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC--CcccccccCCcccCCCCceeEEEEEEecCc-eEEEEEccCCCcc
Confidence 1 22 99999999998 79999999999999998 2344444433 3389999999988 66644 33443
Q ss_pred ----eEEEEEcCC
Q 018697 276 ----TVNLWLVST 284 (351)
Q Consensus 276 ----~i~iwd~~~ 284 (351)
.+++|+++.
T Consensus 266 ~~~~~v~i~~l~~ 278 (434)
T 2oit_A 266 ETSPDVVMALLPK 278 (434)
T ss_dssp SSCCEEEEEECCC
T ss_pred CCCCceEEEEecc
Confidence 389999986
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=1.3e-20 Score=183.48 Aligned_cols=293 Identities=8% Similarity=-0.067 Sum_probs=199.2
Q ss_pred EeeeecCCCCcceEEEeeeee--CCCCEEEEEEeCCCCCeEEEEeeecCCcce-------eeeeeCCCCCceEEEEeecC
Q 018697 18 CISDVKADTDHTSFLTGTLSL--KEENEVHLLRLSSGGTELICEGLFSHPNEI-------WDLSSCPFDQRIFSTVFSTG 88 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v-------~~i~~~~~~~~l~~~~~~~~ 88 (351)
.+..+.++|++.+++.++... .....|++|++.. +. ...+..|...+ ..++|+|+++ ++++. +
T Consensus 54 ~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~--g~--~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~---~ 125 (1045)
T 1k32_A 54 VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN--GE--IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIIST---D 125 (1045)
T ss_dssp EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT--TE--EEECCCCCEEEETTEECSEEEEECTTCC-EEEEE---C
T ss_pred cccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC--CC--eEEcccCCCcccccccccccccCCCCCE-EEEEE---C
Confidence 456677899999998875432 1224566666543 32 45677888888 9999999998 44442 3
Q ss_pred Cc------ceEEEEEcccccCC--CCC--------------------------------------Ccceeeeeeeccccc
Q 018697 89 ES------YGAAIWQIPELYGQ--LNS--------------------------------------PQLERIAALDAHVGK 122 (351)
Q Consensus 89 ~d------~~i~vw~~~~~~~~--~~~--------------------------------------~~~~~~~~~~~h~~~ 122 (351)
.+ ..|.+|++...... ... +.......+..|...
T Consensus 126 ~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~ 205 (1045)
T 1k32_A 126 AMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTH 205 (1045)
T ss_dssp TTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSC
T ss_pred CcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCc
Confidence 32 34666766421100 000 000122334678888
Q ss_pred eeEEEecCCCCCcEEEEecCCcEEEEEcCCCC-CCccccccc----------------------------------ccC-
Q 018697 123 INCVLWWSSGRHDKLVSIDEENIFLWSLDCSN-KNAQVQSKQ----------------------------------SSG- 166 (351)
Q Consensus 123 v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~-~~~~~~~~~----------------------------------~~~- 166 (351)
+.++.|+++ .+++++..++.+.||.+.... ....+.... ...
T Consensus 206 v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~ 283 (1045)
T 1k32_A 206 VSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIG 283 (1045)
T ss_dssp CEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCC
T ss_pred ccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccC
Confidence 899999887 335555677888888765311 111110000 000
Q ss_pred ----------cccceeeeEEC-CCCCcEEEeecCCeEEEEEcccCCcCceee-cc-eeEEEEcCCCCCcEEEEecCCCeE
Q 018697 167 ----------MLHYLSGGAWD-PHDVNAVAATCESSVQFWDLRSMGKTNSIE-HA-HVRNVDYDTKKKHLLVTAADESGI 233 (351)
Q Consensus 167 ----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~-~v~~~~~~~~~~~~l~~~~~dg~i 233 (351)
|...+.+++|+ |+++.|++++ ++.|.+|++..++...... .. .+..++|+ +++ .++.++.+..+
T Consensus 284 ~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~-~l~~~s~~~~l 360 (1045)
T 1k32_A 284 DLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKV-AFIHGTREGDF 360 (1045)
T ss_dssp CCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEE-EEEEEETTEEE
T ss_pred cccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCC-eEEEEECCCce
Confidence 12257888999 9999888877 7889999988765332211 12 28899999 988 57777778888
Q ss_pred E-EEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc
Q 018697 234 H-LWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD 312 (351)
Q Consensus 234 ~-i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (351)
. +||+.. +. ...+..|...+..++|+|+| .+|++++.++.|++||+.+ ++.......
T Consensus 361 ~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~t-------------------g~~~~~~~~ 418 (1045)
T 1k32_A 361 LGIYDYRT-GK-AEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLET-------------------GKPTVIERS 418 (1045)
T ss_dssp EEEEETTT-CC-EEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTT-------------------CCEEEEEEC
T ss_pred EEEEECCC-CC-ceEecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCC-------------------CceEEeccC
Confidence 8 899875 33 44555788899999999999 9999999999999999988 776666667
Q ss_pred ccceEEEEEeCCCCCceEEEeeeC----------CeEEEeecCc
Q 018697 313 YEDSVYGLAWSSREPWIFASLSYD----------GRVVVESVKP 346 (351)
Q Consensus 313 ~~~~v~~~~~~~~~~~~l~s~~~d----------g~v~vw~~~~ 346 (351)
|...+.+++|+|||+ +|++++.+ +.|++||+..
T Consensus 419 ~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 419 REAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp SSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCCCccceEECCCCC-eEEEEecCccccccCCCCCeEEEEECCC
Confidence 888899999999999 66666654 4899999875
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=4.5e-21 Score=175.60 Aligned_cols=275 Identities=13% Similarity=0.029 Sum_probs=189.9
Q ss_pred eeEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCC-cceeeeeeCCCCCceEEEEeecCCcceEE
Q 018697 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHP-NEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~~~~~~~l~~~~~~~~~d~~i~ 94 (351)
...+..+.+++|+.+++.+.. .++.+.+|.+.. +. ...+..|. ..+..++|+|+ +.++++ ...+.+...+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~---~~g~~~lw~~~~--g~--~~~lt~~~~~~~~~~~~spd-~~l~~~-~~~~g~~~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGF---SEGSVNAYLYDG--GE--TVKLNREPINSVLDPHYGVG-RVILVR-DVSKGAEQHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEE---ETTEEEEEEEET--TE--EEECCSSCCSEECEECTTCS-EEEEEE-ECSTTSCCEE
T ss_pred ccchheeecCCCCCeEEEEEc---cCCceeEEEEcC--CC--cEeeecccccccccccCCCC-eEEEEe-ccCCCCcceE
Confidence 345677778899999998753 367888999733 32 24455566 68999999998 444443 1112345567
Q ss_pred EEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeee
Q 018697 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (351)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (351)
+|.+.... ..... .+..+ ..+...+|+|+++.++++++.++.+.+||+.++.. ..+... ...++
T Consensus 92 l~~~~~~~------~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-~~l~~~-------~~~~~ 155 (582)
T 3o4h_A 92 LFKVNTSR------PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-RELARL-------PGFGF 155 (582)
T ss_dssp EEEEETTS------TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-EEEEEE-------SSCEE
T ss_pred EEEEeccC------CCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-EEeecC-------CCceE
Confidence 76665100 11111 22222 23446689999987677776666677999986432 222211 12788
Q ss_pred EECCCCCcEEEeecC----CeEEEEEcccCCcCceee-cce-eEEEEcCCCCCcEEEEecCCC--eEEEEecccCCccee
Q 018697 175 AWDPHDVNAVAATCE----SSVQFWDLRSMGKTNSIE-HAH-VRNVDYDTKKKHLLVTAADES--GIHLWDLRMLKAPIQ 246 (351)
Q Consensus 175 ~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~-~~~-v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~ 246 (351)
+|+|||+.|++++.+ ..|++||+.+++.. .+. ... +..++|+|||+ .|+++..++ .|++||+.. ++..
T Consensus 156 ~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~-~~~~- 231 (582)
T 3o4h_A 156 VSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRD-GSVE- 231 (582)
T ss_dssp EEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTT-CCEE-
T ss_pred EECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCC-CcEE-
Confidence 999999999988766 78999999987754 333 222 89999999999 677788888 899999986 5444
Q ss_pred EeeCCCCceeEEE--------ecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEE
Q 018697 247 ELPGHTHWTWAVC--------CNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVY 318 (351)
Q Consensus 247 ~~~~~~~~v~~~~--------~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (351)
.+..|...+..+. |+|+| .++++++.|+.+++|++ . .. .. .+...|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g-------------------~~-~~---~~~~~v~ 286 (582)
T 3o4h_A 232 DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-G-------------------ER-VE---APQGNHG 286 (582)
T ss_dssp ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-T-------------------EE-EC---CCSSEEE
T ss_pred EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-C-------------------Ce-ec---cCCCceE
Confidence 6777888888888 99999 99999999999999999 3 11 11 1235688
Q ss_pred EEEeCCCCCceEEEeeeCC---eEEEeecCc
Q 018697 319 GLAWSSREPWIFASLSYDG---RVVVESVKP 346 (351)
Q Consensus 319 ~~~~~~~~~~~l~s~~~dg---~v~vw~~~~ 346 (351)
+++|+ +++ ++++++.+. .+.+|+...
T Consensus 287 ~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 287 RVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEE-TTE-EEEEEEETTEEEEEEEETTCC
T ss_pred EEEec-CCE-EEEEEcCCCCCCeEEEEcCCC
Confidence 99999 887 777777764 467777653
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=1.5e-19 Score=155.62 Aligned_cols=251 Identities=8% Similarity=0.034 Sum_probs=163.9
Q ss_pred eecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEE-EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcc
Q 018697 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELI-CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIP 99 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~ 99 (351)
.+.+++++..++++......++.+.+|++....+.+. ......+......+++ +++.|+++ ...++.|.+|++.
T Consensus 54 ~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~---~~~~~~v~~~~~~ 128 (361)
T 3scy_A 54 YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTA---NYSGGSITVFPIG 128 (361)
T ss_dssp SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEE---ETTTTEEEEEEBC
T ss_pred eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEE---ECCCCEEEEEEeC
Confidence 3567788877777654322458999999998744443 2334445667778888 78777776 3578899999987
Q ss_pred cccCCCCCCcceeeeee-----------eccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCC------Cccc--c
Q 018697 100 ELYGQLNSPQLERIAAL-----------DAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNK------NAQV--Q 160 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~~-----------~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~------~~~~--~ 160 (351)
... ....+... +.+...+.+++|+|+++.++++...++.|.+|++..... .... .
T Consensus 129 ~~g------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 129 QDG------ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp TTS------CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred CCC------cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 311 11111111 112234688999999996455545688999999985432 1100 0
Q ss_pred cccccCcccceeeeEECCCCCcEEEee-cCCeEEEEEcccCCcC--ceee--cc--e-eEEEEcCCCCCcEEEEecC-CC
Q 018697 161 SKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKT--NSIE--HA--H-VRNVDYDTKKKHLLVTAAD-ES 231 (351)
Q Consensus 161 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~--~~~~--~~--~-v~~~~~~~~~~~~l~~~~~-dg 231 (351)
..........+..++|+|+++++++++ .++.|.+||+.+++.. ..+. .. . +..++|+|+|++++++... ++
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 000111223577899999999888877 6899999999866431 1121 11 1 6799999999954455555 68
Q ss_pred eEEEEecccC-Cc--ceeEeeCCCCceeEEEecCCCCCeEEEee-CCCeEEEEEcCC
Q 018697 232 GIHLWDLRML-KA--PIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVST 284 (351)
Q Consensus 232 ~i~i~d~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~ 284 (351)
.|.+|++... +. .+..+.. ...+..++|+|+| ++|++++ .++.|.+|++..
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEEECT
T ss_pred EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEEEEC
Confidence 9999999621 22 3344444 5578899999999 7777666 678999976653
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=5.5e-21 Score=186.18 Aligned_cols=254 Identities=14% Similarity=0.077 Sum_probs=187.4
Q ss_pred CCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec-
Q 018697 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA- 118 (351)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~- 118 (351)
.++.+.+|.+...+... ..+..|. .+...+|+|+++.|+.+ .++.|.+|++. .. .+..+..
T Consensus 222 ~dg~~~l~~~~~~g~~~--~~l~~~~-~~~~~~~SpDG~~la~~-----~~~~i~~~d~~---------~~-~l~~l~~~ 283 (1045)
T 1k32_A 222 IDGFGQIYSTDLDGKDL--RKHTSFT-DYYPRHLNTDGRRILFS-----KGGSIYIFNPD---------TE-KIEKIEIG 283 (1045)
T ss_dssp TTSSCEEEEEETTSCSC--EECCCCC-SSCEEEEEESSSCEEEE-----ETTEEEEECTT---------TC-CEEECCCC
T ss_pred ccCceEEEEEeCCCCcc--eEecCCC-CcceeeEcCCCCEEEEE-----eCCEEEEecCC---------ce-EeeeeccC
Confidence 34556667666544322 2333444 46678999999988875 57899999974 11 1223322
Q ss_pred ----------cccceeEEEec-CCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccc-ceeeeEECCCCCcEEEe
Q 018697 119 ----------HVGKINCVLWW-SSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH-YLSGGAWDPHDVNAVAA 186 (351)
Q Consensus 119 ----------h~~~v~~~~~~-~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~ 186 (351)
|...+.+++|+ |+|+. +++++ ++.|.+|++..+.. ..+ ..+.. .+..++|+ +++.++.+
T Consensus 284 ~~~~~~~~~~~~~~v~~~~~S~pdG~~-la~~~-~~~i~~~~~~~~~~-~~~-----~~~~~~~~~~~~~s-dg~~l~~~ 354 (1045)
T 1k32_A 284 DLESPEDRIISIPSKFAEDFSPLDGDL-IAFVS-RGQAFIQDVSGTYV-LKV-----PEPLRIRYVRRGGD-TKVAFIHG 354 (1045)
T ss_dssp CCCBCCSEEEECGGGGEEEEEECGGGC-EEEEE-TTEEEEECTTSSBE-EEC-----SCCSCEEEEEECSS-SEEEEEEE
T ss_pred cccccccccccccccceeeecCCCCCE-EEEEE-cCEEEEEcCCCCce-EEc-----cCCCcceEEeeeEc-CCCeEEEE
Confidence 45579999999 99995 33334 78999999875431 111 12334 78899999 99999998
Q ss_pred ecCCeEE-EEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCC
Q 018697 187 TCESSVQ-FWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY 264 (351)
Q Consensus 187 ~~d~~i~-iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (351)
+.++.+. +||+.+++......... +..++|+|+|+ .|++++.++.|++||+.+ ++....+..|...+..++|+|+|
T Consensus 355 s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG 432 (1045)
T 1k32_A 355 TREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNS 432 (1045)
T ss_dssp ETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTS
T ss_pred ECCCceEEEEECCCCCceEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCC-CceEEeccCCCCCccceEECCCC
Confidence 8888888 99988765432222112 99999999999 788899999999999987 55566666899999999999999
Q ss_pred CCeEEEeeCC----------CeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEee
Q 018697 265 DGFILSAGTD----------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334 (351)
Q Consensus 265 ~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 334 (351)
++|++++.+ +.|++||+.. ++ +..+..|...+..++|+|+|+ .|+.++
T Consensus 433 -~~la~~~~~~~~~~~~~~~~~i~l~d~~~-------------------g~-~~~l~~~~~~~~~~~~spdG~-~l~~~s 490 (1045)
T 1k32_A 433 -RFIAYGFPLKHGETDGYVMQAIHVYDMEG-------------------RK-IFAATTENSHDYAPAFDADSK-NLYYLS 490 (1045)
T ss_dssp -CEEEEEEEECSSTTCSCCEEEEEEEETTT-------------------TE-EEECSCSSSBEEEEEECTTSC-EEEEEE
T ss_pred -CeEEEEecCccccccCCCCCeEEEEECCC-------------------Cc-EEEeeCCCcccCCceEcCCCC-EEEEEe
Confidence 888877664 3899999987 55 566777877889999999999 788888
Q ss_pred eCCeEEEeec
Q 018697 335 YDGRVVVESV 344 (351)
Q Consensus 335 ~dg~v~vw~~ 344 (351)
.++...+|+.
T Consensus 491 ~~~~~~~~~~ 500 (1045)
T 1k32_A 491 YRSLDPSPDR 500 (1045)
T ss_dssp SCCCCCEECS
T ss_pred cccCCcCcch
Confidence 8777777764
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=1e-19 Score=155.71 Aligned_cols=248 Identities=8% Similarity=0.077 Sum_probs=166.5
Q ss_pred ecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccc
Q 018697 22 VKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPEL 101 (351)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~ 101 (351)
+.+++++. +++... ...++.|.+|++.... ......+..+...+..++|+|+++.|+++ +..++.|.+|++..
T Consensus 45 ~a~spdg~-l~~~~~-~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~p~~~a~spdg~~l~~~---~~~~~~v~v~~~~~- 117 (347)
T 3hfq_A 45 LALSAKDC-LYSVDK-EDDEGGIAAWQIDGQT-AHKLNTVVAPGTPPAYVAVDEARQLVYSA---NYHKGTAEVMKIAA- 117 (347)
T ss_dssp EEECTTCE-EEEEEE-ETTEEEEEEEEEETTE-EEEEEEEEEESCCCSEEEEETTTTEEEEE---ETTTTEEEEEEECT-
T ss_pred EEEccCCe-EEEEEe-cCCCceEEEEEecCCc-EEEeeeeecCCCCCEEEEECCCCCEEEEE---eCCCCEEEEEEeCC-
Confidence 55677776 555432 1345789999985432 22334445677889999999999988887 35788999999862
Q ss_pred cCCCCCCcceeeeeeec---------cccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccccee
Q 018697 102 YGQLNSPQLERIAALDA---------HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172 (351)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---------h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~ 172 (351)
......+..+.. +...+.+++|+|+++ ++++...++.|.+|++............. ......+.
T Consensus 118 -----~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~~~g~~p~ 190 (347)
T 3hfq_A 118 -----DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLT-MEAGFGPR 190 (347)
T ss_dssp -----TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEE-CCTTCCEE
T ss_pred -----CCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEE-cCCCCCCc
Confidence 112233333322 123488999999999 55555668899999998322222111101 01112567
Q ss_pred eeEECCCCCcEEEe-ecCCeEEEEEccc--CCc--Cceee---cc----e-eEEEEcCCCCCcEEEEecCCCeEEEEecc
Q 018697 173 GGAWDPHDVNAVAA-TCESSVQFWDLRS--MGK--TNSIE---HA----H-VRNVDYDTKKKHLLVTAADESGIHLWDLR 239 (351)
Q Consensus 173 ~~~~~~~~~~l~~~-~~d~~i~iwd~~~--~~~--~~~~~---~~----~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 239 (351)
.++|+|++++++++ ..++.|.+|++.. ++. ...+. .. . +..++|+|+|++++++...++.|.+||+.
T Consensus 191 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 89999999977765 4688999999885 321 11111 11 2 78899999999655777778999999987
Q ss_pred cCC--cceeEeeCCCCceeEEEecCCCCCeEEEeeC-CCeEEEEEcCC
Q 018697 240 MLK--APIQELPGHTHWTWAVCCNPEYDGFILSAGT-DSTVNLWLVST 284 (351)
Q Consensus 240 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~ 284 (351)
..+ ..+..+..+...+..++|+|+| ++|++++. ++.|.+|++..
T Consensus 271 ~~g~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 271 ADGHLTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp GGGCEEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEEEECT
T ss_pred CCCcEEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEEEEeC
Confidence 322 3455566666778999999999 77777665 58999996653
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=2.2e-21 Score=182.07 Aligned_cols=234 Identities=8% Similarity=-0.019 Sum_probs=159.8
Q ss_pred eeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecccc---ceeEEEecCCCCCcEEEEec----
Q 018697 69 WDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG---KINCVLWWSSGRHDKLVSID---- 141 (351)
Q Consensus 69 ~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~~---- 141 (351)
.+++|+|+++ +++. +.|+.|++||+. .++....+..|.. .+.+++|+|||+. ++.++.
T Consensus 19 ~~~~~s~dg~-~~~~----~~d~~i~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~SpDg~~-la~~~~~~~~ 83 (719)
T 1z68_A 19 FFPNWISGQE-YLHQ----SADNNIVLYNIE---------TGQSYTILSNRTMKSVNASNYGLSPDRQF-VYLESDYSKL 83 (719)
T ss_dssp CCCEESSSSE-EEEE----CTTSCEEEEESS---------SCCEEEEECHHHHHTTTCSEEEECTTSSE-EEEEEEEEEC
T ss_pred CccEECCCCe-EEEE----cCCCCEEEEEcC---------CCcEEEEEccccccccceeeEEECCCCCe-EEEEecCcee
Confidence 4789999995 4443 468999999998 4555555555543 3899999999996 443333
Q ss_pred -----CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---e--
Q 018697 142 -----EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---V-- 211 (351)
Q Consensus 142 -----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v-- 211 (351)
++.|++||+.++........ ...+..++|+|||+.|+.+. ++.|++||+.+++.......++ +
T Consensus 84 ~~~s~~~~i~~~d~~~g~~~~~~~l------~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~ 156 (719)
T 1z68_A 84 WRYSYTATYYIYDLSNGEFVRGNEL------PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFN 156 (719)
T ss_dssp SSSCEEEEEEEEETTTTEECCSSCC------CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEE
T ss_pred EEeecceEEEEEECCCCccccceec------CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEc
Confidence 68999999987543110101 12688899999999998875 7899999998876543322222 2
Q ss_pred ---------------EEEEcCCCCCcEEEEecCCC----------------------------------eEEEEecccCC
Q 018697 212 ---------------RNVDYDTKKKHLLVTAADES----------------------------------GIHLWDLRMLK 242 (351)
Q Consensus 212 ---------------~~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~ 242 (351)
.+++|+|||+ .|++++.|. .|++||+.. +
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~-~ 234 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY-P 234 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC-H
T ss_pred ccccceeeeecccCcccEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC-C
Confidence 4899999999 566665431 788999875 3
Q ss_pred cce--------eEeeCCCCceeEEEecCCCCCeEEEeeCC----CeEEEEE----cCCCCCCCCCCcccccCCccccccc
Q 018697 243 API--------QELPGHTHWTWAVCCNPEYDGFILSAGTD----STVNLWL----VSTSNHDELPSESLVESPNQRANSL 306 (351)
Q Consensus 243 ~~~--------~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (351)
+.. ..+.+|...+..++|+|++ .++++.... ..|.+|| ... +++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~-------------------g~~ 294 (719)
T 1z68_A 235 AYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQT-------------------WDC 294 (719)
T ss_dssp HHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSS-------------------EEC
T ss_pred CccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCC-------------------Cce
Confidence 322 1234688889999999998 777774432 2488889 665 444
Q ss_pred ceee----ccccceEE-----EEEeCCCCCceEE-EeeeCC--eEEEeecCc
Q 018697 307 LNSY----SDYEDSVY-----GLAWSSREPWIFA-SLSYDG--RVVVESVKP 346 (351)
Q Consensus 307 ~~~~----~~~~~~v~-----~~~~~~~~~~~l~-s~~~dg--~v~vw~~~~ 346 (351)
...+ ..|...+. .+.|+|+|+.+++ +...+| .|.+|++..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 295 PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence 4444 35666666 7899999985444 333455 466666643
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=2.2e-20 Score=158.91 Aligned_cols=224 Identities=8% Similarity=0.052 Sum_probs=157.1
Q ss_pred CCcceEEEEEcccccCCCCCCcceeeeeeecccc--ceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccccc
Q 018697 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVG--KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (351)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 165 (351)
+.++.|.+||+. +.+.+..+..... .+..++|+|+++.+++++..++.|.+||+.++.....+......
T Consensus 8 ~~~~~v~~~d~~---------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 8 ARPDKLVVIDTE---------KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp ETTTEEEEEETT---------TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred CCCCeEEEEECC---------CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 688999999987 5666666643322 57899999999865555567899999999875543322211100
Q ss_pred CcccceeeeEECCCCCcEEEee------------cCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCe
Q 018697 166 GMLHYLSGGAWDPHDVNAVAAT------------CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESG 232 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~ 232 (351)
.+...+.+++|+|+++.++++. .++.|.+||+.+++....+..+. +..++|+|+++. ++++ ++.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~ 155 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSK-LYGL--GRD 155 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSC-EEEE--SSS
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCE-EEEe--CCe
Confidence 1223577899999999988886 57999999999887776666444 888999999984 5555 688
Q ss_pred EEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCC-----------------------eEEEEEcCCCCCCC
Q 018697 233 IHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS-----------------------TVNLWLVSTSNHDE 289 (351)
Q Consensus 233 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-----------------------~i~iwd~~~~~~~~ 289 (351)
|++||+.+ .+.+..+..+.. ...+.|+|++..+++++..++ .|.+||...
T Consensus 156 i~~~d~~~-~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~----- 228 (337)
T 1pby_B 156 LHVMDPEA-GTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET----- 228 (337)
T ss_dssp EEEEETTT-TEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT-----
T ss_pred EEEEECCC-CcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC-----
Confidence 99999987 555666654331 123478999933333333333 367888887
Q ss_pred CCCcccccCCcccccccc-eeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 290 LPSESLVESPNQRANSLL-NSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++.. ..+..+...+.+++|+|+++ +++++ ++.|++||+.+.
T Consensus 229 --------------~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 229 --------------GEMAMREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp --------------CCEEEEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTT
T ss_pred --------------CCceEeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCCC
Confidence 4432 23344556688999999998 56665 689999998753
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=8.2e-19 Score=149.93 Aligned_cols=229 Identities=9% Similarity=0.022 Sum_probs=155.8
Q ss_pred CCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCC-cceeeeeeCCCCCceEEEEeecCCcceEEEEEccccc
Q 018697 24 ADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHP-NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY 102 (351)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~ 102 (351)
..++...++.+ ..++.|.+|++... ... ..+..+. ..+..++|+|+++.++++ +..++.|.+||+.
T Consensus 7 ~~~~~~~~v~~----~~~~~v~~~d~~~~--~~~-~~~~~~~~~~~~~~~~s~dg~~~~v~---~~~~~~i~~~d~~--- 73 (349)
T 1jmx_B 7 LKAGHEYMIVT----NYPNNLHVVDVASD--TVY-KSCVMPDKFGPGTAMMAPDNRTAYVL---NNHYGDIYGIDLD--- 73 (349)
T ss_dssp CCTTCEEEEEE----ETTTEEEEEETTTT--EEE-EEEECSSCCSSCEEEECTTSSEEEEE---ETTTTEEEEEETT---
T ss_pred ccCCCEEEEEe----CCCCeEEEEECCCC--cEE-EEEecCCCCCCceeEECCCCCEEEEE---eCCCCcEEEEeCC---
Confidence 34444444443 24788999887653 222 2233222 267899999999877765 3678899999987
Q ss_pred CCCCCCcceeeeeeecc------ccceeEEEecCCCCCcEEEEec------------CCcEEEEEcCCCCCCcccccccc
Q 018697 103 GQLNSPQLERIAALDAH------VGKINCVLWWSSGRHDKLVSID------------EENIFLWSLDCSNKNAQVQSKQS 164 (351)
Q Consensus 103 ~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~~~~~~------------d~~v~iwd~~~~~~~~~~~~~~~ 164 (351)
+.+.+..+..+ ...+.+++|+|+++. +++++. ++.|.+||+.++..........
T Consensus 74 ------t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~- 145 (349)
T 1jmx_B 74 ------TCKNTFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP- 145 (349)
T ss_dssp ------TTEEEEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-
T ss_pred ------CCcEEEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccceeeecc-
Confidence 45555555432 233788999999996 444443 4899999998643222111111
Q ss_pred cCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecc-----------------------------------
Q 018697 165 SGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA----------------------------------- 209 (351)
Q Consensus 165 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----------------------------------- 209 (351)
+...+.+++|+|+++ +++++ +.|.+||+.+++....+...
T Consensus 146 --~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (349)
T 1jmx_B 146 --MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 220 (349)
T ss_dssp --CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred --CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC
Confidence 122588899999999 66654 34999999877654333211
Q ss_pred -----------------------------------eeEEEEcCC-CCCcEEEEecCCCeEEEEecccCCcceeEeeCCCC
Q 018697 210 -----------------------------------HVRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTH 253 (351)
Q Consensus 210 -----------------------------------~v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 253 (351)
.+..++|+| +++ +++++ ++.|.+||+++ .+.+..+.. ..
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~ 295 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQ-RKLIKAANL-DH 295 (349)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTT-TEEEEEEEC-SS
T ss_pred CCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECcc-CeEEEEEcC-CC
Confidence 034667789 998 56666 88999999987 556666653 34
Q ss_pred ceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 254 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
.+.+++|+|++ .+|++++.++.|++||..+
T Consensus 296 ~~~~~~~s~dg-~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 296 TYYCVAFDKKG-DKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp CCCEEEECSSS-SCEEEESBSSEEEEEETTT
T ss_pred CccceEECCCC-CEEEEecCCCeEEEEeccc
Confidence 57899999999 7777788899999999988
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=2.4e-20 Score=175.02 Aligned_cols=280 Identities=11% Similarity=0.081 Sum_probs=176.3
Q ss_pred eecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCc---ceeeeeeCCCCCceEEEEeec-----CCcce
Q 018697 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPN---EIWDLSSCPFDQRIFSTVFST-----GESYG 92 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~---~v~~i~~~~~~~~l~~~~~~~-----~~d~~ 92 (351)
...+.+++ +++... .++.+++|++...... ..+.+|.. .|.+++|||||+.|+.+.... +.++.
T Consensus 20 ~~~~s~dg-~~~~~~----~d~~i~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 20 FPNWISGQ-EYLHQS----ADNNIVLYNIETGQSY---TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCEESSSS-EEEEEC----TTSCEEEEESSSCCEE---EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccEECCCC-eEEEEc----CCCCEEEEEcCCCcEE---EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 34556677 455443 4778999988764321 22223333 389999999999998864111 12689
Q ss_pred EEEEEcccccCCCCCCcceee--eeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccc----ccC
Q 018697 93 AAIWQIPELYGQLNSPQLERI--AALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ----SSG 166 (351)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~----~~~ 166 (351)
|++||+. ..+.+ ..+ ...+..++|+|||+. + +...++.|++|++.++.......... ..+
T Consensus 92 i~~~d~~---------~g~~~~~~~l---~~~~~~~~~SPDG~~-l-a~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 92 YYIYDLS---------NGEFVRGNEL---PRPIQYLCWSPVGSK-L-AYVYQNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp EEEEETT---------TTEECCSSCC---CSSBCCEEECSSTTC-E-EEEETTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred EEEEECC---------CCccccceec---CcccccceECCCCCE-E-EEEECCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 9999987 33331 122 246889999999995 3 33357899999998654322111110 001
Q ss_pred ccc---------ceeeeEECCCCCcEEEeecCC----------------------------------eEEEEEcccCCcC
Q 018697 167 MLH---------YLSGGAWDPHDVNAVAATCES----------------------------------SVQFWDLRSMGKT 203 (351)
Q Consensus 167 ~~~---------~v~~~~~~~~~~~l~~~~~d~----------------------------------~i~iwd~~~~~~~ 203 (351)
+.. ...+++|+|||+.|++++.|. .|++||+.+++..
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~ 237 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV 237 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence 111 125899999999999887542 7889999887642
Q ss_pred --cee------e-cce-eEEEEcCCCCCcEEEEecCC----CeEEEEe----cccCCcceeEe----eCCCCcee-----
Q 018697 204 --NSI------E-HAH-VRNVDYDTKKKHLLVTAADE----SGIHLWD----LRMLKAPIQEL----PGHTHWTW----- 256 (351)
Q Consensus 204 --~~~------~-~~~-v~~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~----~~~~~~v~----- 256 (351)
..+ . ... +..++|+||++ ++++.... ..|.+|| ..+ ++....+ ..|...+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 238 GPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp CCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSSCSSSSSCC
T ss_pred ceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCceEccccCC
Confidence 111 1 122 89999999986 66664322 3588889 654 3333333 46777776
Q ss_pred EEEecCCCCCeEE-EeeCCC--eEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEe
Q 018697 257 AVCCNPEYDGFIL-SAGTDS--TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASL 333 (351)
Q Consensus 257 ~~~~~~~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 333 (351)
.+.|+|+|+.+++ +...++ .|.+||+.. ++ ...+..+...+..+.++ +++.+++++
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~-------------------~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~ 374 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTV-------------------EN-AIQITSGKWEAINIFRV-TQDSLFYSS 374 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCS-------------------TT-CEECSCSSSCEEEEEEE-CSSEEEEEE
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCC-------------------Cc-eEecccCceEEEEEEEE-eCCEEEEEE
Confidence 8999999933333 354566 455666654 33 34454555557777777 777555555
Q ss_pred ee----CCeEEEeecC
Q 018697 334 SY----DGRVVVESVK 345 (351)
Q Consensus 334 ~~----dg~v~vw~~~ 345 (351)
.. ++.+++|.++
T Consensus 375 ~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 375 NEFEEYPGRRNIYRIS 390 (719)
T ss_dssp SCGGGCTTCBEEEEEE
T ss_pred ecCCCCCceEEEEEEe
Confidence 44 5888999875
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=3e-18 Score=145.44 Aligned_cols=245 Identities=9% Similarity=0.040 Sum_probs=174.9
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCc------------------------ceEEEEEcccccCCCCCCcceeeeeee-cc
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGES------------------------YGAAIWQIPELYGQLNSPQLERIAALD-AH 119 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d------------------------~~i~vw~~~~~~~~~~~~~~~~~~~~~-~h 119 (351)
-+.+.+++++|+++.+++. ..+ +.|.+||.. +++.+..+. .+
T Consensus 23 l~~v~~va~d~~G~l~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---------~g~~~~~~~~~~ 89 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFH----RGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN---------NAEILQSSGKNL 89 (329)
T ss_dssp CSCEEEEEECTTCCEEEEE----CTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT---------TCCEEEEECTTT
T ss_pred cCCceEEEECCCCCEEEEe----CCCCeEEeeccCcceeecccccccccCCcEEEEECC---------CCeEEeccCCCc
Confidence 3678999999998777664 333 468999976 445544443 34
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccc-----ccCcccceeeeEECC-CCCcEEEee-cCCeE
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ-----SSGMLHYLSGGAWDP-HDVNAVAAT-CESSV 192 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i 192 (351)
-.....++++|++. ++++...++.|++|+..........+... ..++.....+++++| ++..+++.+ .++.|
T Consensus 90 ~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 90 FYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred cCCceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 45788999999998 45555778999999986432122211110 023344688999999 666666665 68999
Q ss_pred EEEEcccCCcCceee---------cce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee--CCCCceeEE
Q 018697 193 QFWDLRSMGKTNSIE---------HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP--GHTHWTWAV 258 (351)
Q Consensus 193 ~iwd~~~~~~~~~~~---------~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~ 258 (351)
++|| .+++.+..+. ..+ +..++++|++..++++...++.|++||..+ ++.+..+. .+...+..+
T Consensus 169 ~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 169 VQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTTCEEEE
T ss_pred EEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCCCccee
Confidence 9999 4455554442 112 889999999444888888999999999985 55666664 456678899
Q ss_pred EecCCCCCeEEE-------eeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceee---ccccceEEEEEeCCCCCc
Q 018697 259 CCNPEYDGFILS-------AGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY---SDYEDSVYGLAWSSREPW 328 (351)
Q Consensus 259 ~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~ 328 (351)
+|+| + ..+.+ ...+..|++||... ++.+..+ ..+...+.+++++|+|.
T Consensus 247 ~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~-------------------g~~~~~~~~~~~~~~~p~~ia~~~dG~- 304 (329)
T 3fvz_A 247 SYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSS-------------------GEIIDVFKPVRKHFDMPHDIVASEDGT- 304 (329)
T ss_dssp EEET-T-EEEEEECCCCTTCSCCCCEEEEETTT-------------------CCEEEEECCSSSCCSSEEEEEECTTSE-
T ss_pred eecC-C-EEEEeCCCEEeccCCCcEEEEEEcCC-------------------CeEEEEEcCCCCccCCeeEEEECCCCC-
Confidence 9999 4 33333 33455899999988 7777776 35666789999999996
Q ss_pred eEEEeeeCCeEEEeecCcc
Q 018697 329 IFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 329 ~l~s~~~dg~v~vw~~~~~ 347 (351)
++++...++.|++|++...
T Consensus 305 lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEESSSCCEEEEEEEEC
T ss_pred EEEEECCCCEEEEEeCCcc
Confidence 8999999999999998653
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=3.8e-19 Score=154.46 Aligned_cols=279 Identities=10% Similarity=0.020 Sum_probs=171.4
Q ss_pred ecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccc
Q 018697 22 VKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPEL 101 (351)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~ 101 (351)
..++|++.++++.... .....+.++++.. +... ....++...+..++|+|+++.|+.+ +.++.|.+||+.
T Consensus 41 ~~~SpDg~~l~~~~~~-~g~~~l~~~d~~~--g~~~-~lt~~~~~~~~~~~~spdg~~l~~~----~~~~~l~~~d~~-- 110 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAF-DGPWNYYLLDLNT--QVAT-QLTEGRGDNTFGGFLSPDDDALFYV----KDGRNLMRVDLA-- 110 (388)
T ss_dssp CCBCTTSCEEEEEECT-TSSCEEEEEETTT--CEEE-ECCCSSCBCSSSCEECTTSSEEEEE----ETTTEEEEEETT--
T ss_pred ccCCCCCCEEEEEEcC-CCCceEEEEeCCC--CceE-EeeeCCCCCccceEEcCCCCEEEEE----eCCCeEEEEECC--
Confidence 4578899888887531 1122455555543 3322 3334555666678999999999886 467799999998
Q ss_pred cCCCCCCcceeeeeeeccccceeEEE--ecCCCCCcEEEE----------------------ecCCcEEEEEcCCCCCCc
Q 018697 102 YGQLNSPQLERIAALDAHVGKINCVL--WWSSGRHDKLVS----------------------IDEENIFLWSLDCSNKNA 157 (351)
Q Consensus 102 ~~~~~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~~~~~----------------------~~d~~v~iwd~~~~~~~~ 157 (351)
..+....+..+...+.... ++|++.. ++.. ..+..|.+||+.++.. .
T Consensus 111 -------~g~~~~~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-~ 181 (388)
T 3pe7_A 111 -------TLEENVVYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-T 181 (388)
T ss_dssp -------TCCEEEEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-E
T ss_pred -------CCcceeeeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-E
Confidence 4444444555555554444 4888884 3221 1346799999987532 2
Q ss_pred ccccccccCcccceeeeEECC-CCCcEEEeecC------CeEEEEEcccCCcCceeecc--e-eEEEEcCCCCCcEEEEe
Q 018697 158 QVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCE------SSVQFWDLRSMGKTNSIEHA--H-VRNVDYDTKKKHLLVTA 227 (351)
Q Consensus 158 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~--~-v~~~~~~~~~~~~l~~~ 227 (351)
.+.. +...+..++|+| +++.|+....+ ..|.++|+..++........ . +..++|+|+|+.+++++
T Consensus 182 ~l~~-----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 182 VILQ-----ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp EEEE-----ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred Eeec-----CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 2221 223678999999 99988877643 37888887655432222222 2 77889999999554444
Q ss_pred cCCC----eEEEEecccCCc-ceeEeeCCCCc---eeEEEecCCCCCeEEEe---------eCCCeEEEEEcCCCCCCCC
Q 018697 228 ADES----GIHLWDLRMLKA-PIQELPGHTHW---TWAVCCNPEYDGFILSA---------GTDSTVNLWLVSTSNHDEL 290 (351)
Q Consensus 228 ~~dg----~i~i~d~~~~~~-~~~~~~~~~~~---v~~~~~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~ 290 (351)
..++ .|++||+.+... .+..+..+... ...+.|+|+| ..|+.. ..+..|.+||+..
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~------ 329 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDG-SDAPVDVQDDSGYKIENDPFLYVFNMKN------ 329 (388)
T ss_dssp EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEE-CCC------------CCCCEEEEEETTT------
T ss_pred cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCC-CcceeEeeeccccccCCCCEEEEEeccC------
Confidence 4322 399999986321 22222221111 2234799999 555532 4567899999986
Q ss_pred CCcccccCCcccccccceeeccccc-----------eEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 291 PSESLVESPNQRANSLLNSYSDYED-----------SVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
++. ..+..+.. .+.+++|+|||+.+++++..++...||.++
T Consensus 330 -------------~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 330 -------------GTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp -------------TEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred -------------Cce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 333 33434433 477889999999555555567777777553
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=1.7e-17 Score=137.93 Aligned_cols=239 Identities=11% Similarity=0.111 Sum_probs=168.5
Q ss_pred cCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee------ccccceeEEEec-CCCCCc
Q 018697 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD------AHVGKINCVLWW-SSGRHD 135 (351)
Q Consensus 63 ~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~-~~~~~~ 135 (351)
++-..+.+++++|++..+++. ..++.|.+|+.. .+.+..+. .+...+.++++. +++. +
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~----~~~~~i~~~d~~----------g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l 91 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVAD----TNNHRIQIFDKE----------GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-I 91 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEE----GGGTEEEEECTT----------SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-E
T ss_pred CccCCCceEEECCCCCEEEEE----CCCCEEEEECCC----------CcEEEEecccCCCcccccCceEEEEEcCCCe-E
Confidence 455678999999998755553 567899999965 23333332 244578899994 6665 3
Q ss_pred EEEEe-cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeec-ce---
Q 018697 136 KLVSI-DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH-AH--- 210 (351)
Q Consensus 136 ~~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~--- 210 (351)
+++.. .++.|.+||.. +.....+ .. .+...+.+++++|+++.+++...++.|.+||.. ++....+.. .+
T Consensus 92 ~v~~~~~~~~i~~~d~~-g~~~~~~-~~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 92 IVTERSPTHQIQIYNQY-GQFVRKF-GA---TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEF 165 (286)
T ss_dssp EEEECGGGCEEEEECTT-SCEEEEE-CT---TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSS
T ss_pred EEEcCCCCCEEEEECCC-CcEEEEe-cC---ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCC
Confidence 44443 37899999944 3322211 11 123367899999999866666678999999965 444444432 12
Q ss_pred eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC--CCceeEEEecCCCCCeEEEeeCCC-eEEEEEcCCCCC
Q 018697 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH--THWTWAVCCNPEYDGFILSAGTDS-TVNLWLVSTSNH 287 (351)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~ 287 (351)
+..++++|++. ++++...++.|++||.. ++.+..+..+ ...+..++++|+| .++++...++ .|.+||..
T Consensus 166 p~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~---- 237 (286)
T 1q7f_A 166 PNGVVVNDKQE-IFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQD---- 237 (286)
T ss_dssp EEEEEECSSSE-EEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTT----
T ss_pred cEEEEECCCCC-EEEEECCCCEEEEEcCC--CCEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCC----
Confidence 89999999997 78878888999999975 4455666433 3578999999999 8888887776 99999964
Q ss_pred CCCCCcccccCCcccccccceeecccc--ceEEEEEeCCCCCceEEEeeeCCeEEEeecCccc
Q 018697 288 DELPSESLVESPNQRANSLLNSYSDYE--DSVYGLAWSSREPWIFASLSYDGRVVVESVKPFL 348 (351)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~ 348 (351)
++.+..+..+. ..+.+++++|+|. ++++ +.|+.|++|++....
T Consensus 238 ----------------g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 238 ----------------GQLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp ----------------SCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSCCC
T ss_pred ----------------CCEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEccccc
Confidence 45555554432 2478999999997 6777 569999999986543
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=9.7e-18 Score=144.44 Aligned_cols=246 Identities=8% Similarity=-0.036 Sum_probs=153.8
Q ss_pred eecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCce-EEEEe------ecC----C
Q 018697 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRI-FSTVF------STG----E 89 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l-~~~~~------~~~----~ 89 (351)
.+.+++++..++++.. + .+.+|++...+..........+ +.+..++|+|+++.+ +.++. .+. .
T Consensus 44 ~~a~spdg~~l~~~~~----~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 44 WMTFDHERKNIYGAAM----K-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp EEEECTTSSEEEEEEB----T-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred EEEECCCCCEEEEEcc----c-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 4556777777766543 2 7888888632322211111111 346779999999863 33310 000 5
Q ss_pred cceEEEEEcccccCCCCCCcceeeeeee----ccccceeEEEecCCCCCcEEEE-ecCCcEEEEEcC-CCCCCccccccc
Q 018697 90 SYGAAIWQIPELYGQLNSPQLERIAALD----AHVGKINCVLWWSSGRHDKLVS-IDEENIFLWSLD-CSNKNAQVQSKQ 163 (351)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~~~-~~d~~v~iwd~~-~~~~~~~~~~~~ 163 (351)
++.+.+|++.. .++....+. .+...+.+++|+|+|+. ++++ ..++.|++|++. ++.. .......
T Consensus 118 ~g~v~v~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~~~~v~~~~~~~~g~~-~~~~~~~ 187 (365)
T 1jof_A 118 AGYGNVFSVSE--------TGKLEKNVQNYEYQENTGIHGMVFDPTETY-LYSADLTANKLWTHRKLASGEV-ELVGSVD 187 (365)
T ss_dssp CCEEEEEEECT--------TCCEEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEECTTSCE-EEEEEEE
T ss_pred CceEEEEccCC--------CCcCcceEeeEEeCCCCcceEEEECCCCCE-EEEEcCCCCEEEEEEECCCCCE-EEeeeEe
Confidence 78999999862 122222222 24567899999999985 4444 346899999998 4332 1111111
Q ss_pred ccCcccceeeeEECCCCCcEEEeec-CCeEEEEEcc--cCCcCc------eeec-----c-------eeEEEE-cCCCCC
Q 018697 164 SSGMLHYLSGGAWDPHDVNAVAATC-ESSVQFWDLR--SMGKTN------SIEH-----A-------HVRNVD-YDTKKK 221 (351)
Q Consensus 164 ~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~--~~~~~~------~~~~-----~-------~v~~~~-~~~~~~ 221 (351)
...+...+..++|+|+++++++++. ++.|.+|++. +++... .+.. . .+..++ |+|+|+
T Consensus 188 ~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 188 APDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK 267 (365)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS
T ss_pred cCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC
Confidence 0112236889999999999888774 7899999875 344211 1111 1 367899 999999
Q ss_pred cEEEEecC-CC-----eEEEEecccCCccee---EeeCCCCceeEEEecC---CCCCeEEEeeC-CCeEEEEEcCC
Q 018697 222 HLLVTAAD-ES-----GIHLWDLRMLKAPIQ---ELPGHTHWTWAVCCNP---EYDGFILSAGT-DSTVNLWLVST 284 (351)
Q Consensus 222 ~~l~~~~~-dg-----~i~i~d~~~~~~~~~---~~~~~~~~v~~~~~~~---~~~~~l~s~~~-dg~i~iwd~~~ 284 (351)
+ |+++.. +. .|.+|++...++... ....+...+..++|+| +| .+|++++. ++.|.+|++..
T Consensus 268 ~-l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg-~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 268 Y-MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD-EWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp E-EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT-TEEEEECSSSCEEEEEEEET
T ss_pred E-EEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC-CEEEEEEcCCCeEEEEEEch
Confidence 4 444443 33 899999963243322 2333555677899999 78 88888876 48999999976
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=2.3e-18 Score=161.86 Aligned_cols=237 Identities=8% Similarity=0.015 Sum_probs=155.8
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccc-----eeEEEecCCCCCcEEEEe
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGK-----INCVLWWSSGRHDKLVSI 140 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~~~~~~ 140 (351)
....+++|+|+++.+++ + |+.|++|++. +.+....+..|... ...+.|||||+. ++.++
T Consensus 17 ~~~~~~~w~~dg~~~~~-----~-~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~-l~~~~ 80 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYK-----Q-ENNILVFNAE---------YGNSSVFLENSTFDEFGHSINDYSISPDGQF-ILLEY 80 (740)
T ss_dssp CCCCCEEECSSSEEEEE-----E-TTEEEEEETT---------TCCEEEEECTTTTTTCCSCCCEEEECTTSSE-EEEEE
T ss_pred ccccccEECCCCcEEEE-----c-CCcEEEEECC---------CCceEEEEechhhhhhcccccceEECCCCCE-EEEEE
Confidence 45678999999976655 2 8899999998 45555556666532 244789999996 44444
Q ss_pred cC---------CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce-
Q 018697 141 DE---------ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH- 210 (351)
Q Consensus 141 ~d---------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~- 210 (351)
.+ +.+.+||+.++... .+. .+...+...+|+|||+.|+.+ .++.|++||+.+++.......++
T Consensus 81 ~~~~~~r~~~~~~~~~~d~~~~~~~-~l~-----~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~ 153 (740)
T 4a5s_A 81 NYVKQWRHSYTASYDIYDLNKRQLI-TEE-----RIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKE 153 (740)
T ss_dssp EEEECSSSCEEEEEEEEETTTTEEC-CSS-----CCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBT
T ss_pred CCeeeEEEccceEEEEEECCCCcEE-Ecc-----cCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCc
Confidence 33 66789999975422 211 233478999999999999887 47899999998876443222122
Q ss_pred --e-----------------EEEEcCCCCCcEEEEecCC-C-----------------------------------eEEE
Q 018697 211 --V-----------------RNVDYDTKKKHLLVTAADE-S-----------------------------------GIHL 235 (351)
Q Consensus 211 --v-----------------~~~~~~~~~~~~l~~~~~d-g-----------------------------------~i~i 235 (351)
+ ..+.|+|||+ .|+..+.| + .|++
T Consensus 154 ~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v 232 (740)
T 4a5s_A 154 DIIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFV 232 (740)
T ss_dssp TTEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred cceecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEE
Confidence 2 2489999999 55554321 1 5788
Q ss_pred Eeccc---CCc-ceeEee------CCCCceeEEEecCCCCCeEEEee----CCCeEEEEEcCCCCCCCCCCcccccCCcc
Q 018697 236 WDLRM---LKA-PIQELP------GHTHWTWAVCCNPEYDGFILSAG----TDSTVNLWLVSTSNHDELPSESLVESPNQ 301 (351)
Q Consensus 236 ~d~~~---~~~-~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (351)
||+.. ... ....+. +|...+..++|+|+| ++++... .+..|.+||+.+
T Consensus 233 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg-~~~~~~~~r~~~~~~i~~~d~~t----------------- 294 (740)
T 4a5s_A 233 VNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE-RISLQWLRRIQNYSVMDICDYDE----------------- 294 (740)
T ss_dssp EETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT-EEEEEEEESSTTEEEEEEEEEET-----------------
T ss_pred EECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC-eEEEEEeCCCCCEEEEEEEECCC-----------------
Confidence 88875 321 233343 377889999999999 6555443 234799999987
Q ss_pred cccc----c--ceee--ccccceEE-----EEEeCCCCCceEEEee-eC--CeEEEeecCc
Q 018697 302 RANS----L--LNSY--SDYEDSVY-----GLAWSSREPWIFASLS-YD--GRVVVESVKP 346 (351)
Q Consensus 302 ~~~~----~--~~~~--~~~~~~v~-----~~~~~~~~~~~l~s~~-~d--g~v~vw~~~~ 346 (351)
++ + +..+ ..|...|. .+.|+|||+.++...+ .+ ..|++|++..
T Consensus 295 --g~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 295 --SSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp --TTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC
T ss_pred --CccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCC
Confidence 33 1 1222 33444443 7889999995442554 33 4577777654
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=5.3e-18 Score=157.65 Aligned_cols=251 Identities=10% Similarity=-0.039 Sum_probs=161.7
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecccccee---------EEEec
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKIN---------CVLWW 129 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~ 129 (351)
..+.+|...+..++|+++.-.++.. ..+.++...||... .......+..|...+. ...|+
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~--~~~~~~~~~l~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 85 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAP--RPAEAGRATLVRRR---------ADGAEESALPAPWNVRNRVFEYSGFPWAGV 85 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEE--ETTTTTEEEEEEEC---------TTSCEEESSCTTCCBCCCGGGTCCCCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEec--CcccCCcEEEEEEC---------CCCCcceeCCCCccccccccccCCccceee
Confidence 4456789999999999764333332 12567889999864 2233445556655555 56565
Q ss_pred --CCCCC-cEEEEecCCcEEEEEcC--CCCCCcccccccccCcccceeeeEECCCCCcEEEeecC----------CeEEE
Q 018697 130 --SSGRH-DKLVSIDEENIFLWSLD--CSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE----------SSVQF 194 (351)
Q Consensus 130 --~~~~~-~~~~~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~i 194 (351)
||++. +++++..+..|.++++. .......+.......+...+.+++|+||++.|++++.+ ..|++
T Consensus 86 ~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 86 PRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred eecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 99996 34333335667777665 20222222221111134578899999999999988866 58999
Q ss_pred EEccc------CCcCceee-cce--eEEEEcCCCCCcEEEEecCC--------CeEEEEecccCC---cceeEeeCCCCc
Q 018697 195 WDLRS------MGKTNSIE-HAH--VRNVDYDTKKKHLLVTAADE--------SGIHLWDLRMLK---APIQELPGHTHW 254 (351)
Q Consensus 195 wd~~~------~~~~~~~~-~~~--v~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~---~~~~~~~~~~~~ 254 (351)
||+.+ ++.. .+. ..+ +..++|+|||+ .|+.++.+ ..|++||+...+ +.......|...
T Consensus 166 ~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 166 VPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA 243 (662)
T ss_dssp EETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC
T ss_pred EECCCCccccCCcee-EEEecCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce
Confidence 99987 4432 332 223 88899999999 55555433 479999998313 333334455788
Q ss_pred eeEEEecCCCCCeEEEeeCCC--eEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccce--------EEEEEeCC
Q 018697 255 TWAVCCNPEYDGFILSAGTDS--TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDS--------VYGLAWSS 324 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------v~~~~~~~ 324 (351)
+..+.|+|+| +++++++.++ .|.+||... ++.......+... +..++|+|
T Consensus 244 ~~~~~~spdg-~l~~~~~~~~~~~l~~~~~~~-------------------~~~~~l~~~~~~~~~p~w~~~~~~~~~~~ 303 (662)
T 3azo_A 244 IAQAEWAPDG-SLIVATDRTGWWNLHRVDPAT-------------------GAATQLCRREEEFAGPLWTPGMRWFAPLA 303 (662)
T ss_dssp EEEEEECTTS-CEEEEECTTSSCEEEEECTTT-------------------CCEEESSCCSSBSSCCCCSTTCCSEEECT
T ss_pred EcceEECCCC-eEEEEECCCCCeEEEEEECCC-------------------CceeecccccccccCccccccCceEeEeC
Confidence 9999999999 6888888888 455555544 2222222222111 45788999
Q ss_pred CCCceEEEeeeCCeEEEeec
Q 018697 325 REPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 325 ~~~~~l~s~~~dg~v~vw~~ 344 (351)
++. +++++.. +.++||.+
T Consensus 304 ~~~-~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 304 NGL-IAVVHGK-GAAVLGIL 321 (662)
T ss_dssp TSC-EEEEEBS-SSCEEEEE
T ss_pred CCE-EEEEEEc-CccEEEEE
Confidence 988 8888888 99999944
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=2.9e-17 Score=152.66 Aligned_cols=280 Identities=12% Similarity=0.023 Sum_probs=169.6
Q ss_pred EeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCccee---------eeeeC--CCCCc-eEEEEe
Q 018697 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIW---------DLSSC--PFDQR-IFSTVF 85 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~---------~i~~~--~~~~~-l~~~~~ 85 (351)
.+..+.++++. +++.......++...+|.....+ . ...+..|...+. ...|+ ||++. |+.+
T Consensus 25 ~~~~~~~s~~~--~~~~~~~~~~~~~~~l~~~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~-- 97 (662)
T 3azo_A 25 RPACVGAVGDE--VWWVAPRPAEAGRATLVRRRADG-A--EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT-- 97 (662)
T ss_dssp CCEEEEEETTE--EEEEEEETTTTTEEEEEEECTTS-C--EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE--
T ss_pred ccceeEEcCCe--EEEEecCcccCCcEEEEEECCCC-C--cceeCCCCccccccccccCCccceeeeecCCCeEEEEE--
Confidence 34444444443 33333222445677777764332 2 345566766666 55565 99998 7665
Q ss_pred ecCCcceEEEEEcccccCCCCCCcc-eeeeeeec-----cccceeEEEecCCCCCcEEEEecC----------CcEEEEE
Q 018697 86 STGESYGAAIWQIPELYGQLNSPQL-ERIAALDA-----HVGKINCVLWWSSGRHDKLVSIDE----------ENIFLWS 149 (351)
Q Consensus 86 ~~~~d~~i~vw~~~~~~~~~~~~~~-~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~~d----------~~v~iwd 149 (351)
...+..|.++++.. .. .....+.. |...+..++|+|||+. +++++.+ ..|++||
T Consensus 98 -~~~~~~l~~~~~~~--------~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~-l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 98 -HFGDQRLYAFEPDA--------PGGAVPRPLTPVSAVGGGLRWADPVLLPERGE-VWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp -BTTTCCEEEECTTS--------TTCCCCEECSCCCCSTTCEEEEEEEEETTTTE-EEEEEEEECSSSTTCEEEEEEEEE
T ss_pred -ECCCCeEEEEcCCC--------CCCCCCEeccCCccCCCCccccCcEECCCCCE-EEEEEecccCCCCCCceeEEEEEE
Confidence 23344455554320 01 22334444 6778899999999996 4444444 5899999
Q ss_pred cCCC-----CCCcccccccccCcccceeeeEECCCCCcEEEeecC--------CeEEEEEcc-cCC--cCceeecc--e-
Q 018697 150 LDCS-----NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE--------SSVQFWDLR-SMG--KTNSIEHA--H- 210 (351)
Q Consensus 150 ~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~-~~~--~~~~~~~~--~- 210 (351)
+.+. .....+.. .+...+..++|+|||+.|+.++.+ ..|++||+. ++. ....+... .
T Consensus 168 ~~~~~~~~~~~~~~l~~----~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 168 LDGSAAADRSAVRELSD----DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA 243 (662)
T ss_dssp TTSTTTTCGGGSEESSC----SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC
T ss_pred CCCCccccCCceeEEEe----cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce
Confidence 9862 12222210 122367889999999999887754 379999998 461 22333322 2
Q ss_pred eEEEEcCCCCCcEEEEecCCC--eEEEEecccCCcceeEeeCCCCc---------eeEEEecCCCCCeEEEeeCCCeEEE
Q 018697 211 VRNVDYDTKKKHLLVTAADES--GIHLWDLRMLKAPIQELPGHTHW---------TWAVCCNPEYDGFILSAGTDSTVNL 279 (351)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~s~~~dg~i~i 279 (351)
+..++|+|+|+ +++++..++ .|.+||+.. ++ ...+..+... +..++|+|++ .++++++. +.++|
T Consensus 244 ~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~-~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~~-~~~~l 318 (662)
T 3azo_A 244 IAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT-GA-ATQLCRREEEFAGPLWTPGMRWFAPLANG-LIAVVHGK-GAAVL 318 (662)
T ss_dssp EEEEEECTTSC-EEEEECTTSSCEEEEECTTT-CC-EEESSCCSSBSSCCCCSTTCCSEEECTTS-CEEEEEBS-SSCEE
T ss_pred EcceEECCCCe-EEEEECCCCCeEEEEEECCC-Cc-eeecccccccccCccccccCceEeEeCCC-EEEEEEEc-CccEE
Confidence 89999999999 888888888 566666644 33 3333322221 4678889998 89999988 99999
Q ss_pred EEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEE-EeCCCCCceE-EEeeeCCeEEEee
Q 018697 280 WLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL-AWSSREPWIF-ASLSYDGRVVVES 343 (351)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l-~s~~~dg~v~vw~ 343 (351)
|.+... ...+..+..|...+..+ +++ +..++ ++++.+....+|.
T Consensus 319 ~~~d~~------------------~~~~~~l~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 319 GILDPE------------------SGELVDAAGPWTEWAATLTVS--GTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp EEEETT------------------TTEEEECCSSCCEEEEEEEEE--TTEEEEEEEETTEEEEEEE
T ss_pred EEEECC------------------CCcEEEecCCCCeEEEEEecC--CCEEEEEEcCCCCCCEEEE
Confidence 955420 23356666677777776 554 44344 4444454444443
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.79 E-value=5.3e-16 Score=145.25 Aligned_cols=250 Identities=10% Similarity=0.096 Sum_probs=167.0
Q ss_pred CCcceeeeeeCCCCCceEEEEeecCCc-ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecC
Q 018697 64 HPNEIWDLSSCPFDQRIFSTVFSTGES-YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE 142 (351)
Q Consensus 64 h~~~v~~i~~~~~~~~l~~~~~~~~~d-~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d 142 (351)
|...+..++||||++.|+.+...+|.+ ..|++||+. +++..... .....+..++|+|||+. ++.++.+
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~---------tg~~~~~~-~~~~~~~~~~wspDg~~-l~~~~~~ 191 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD---------GAKELPDV-LERVKFSCMAWTHDGKG-MFYNAYP 191 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT---------TTEEEEEE-EEEECSCCEEECTTSSE-EEEEECC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC---------CCCCCccc-ccCcccceEEEEeCCCE-EEEEEEC
Confidence 445788999999999998775433332 489999998 44444322 12223678999999996 4444444
Q ss_pred Cc----------------EEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec-----CCeEEEEEccc--
Q 018697 143 EN----------------IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-----ESSVQFWDLRS-- 199 (351)
Q Consensus 143 ~~----------------v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~-- 199 (351)
+. |++|++.++........ ....+...+.++.|+|++++|+.++. +..|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~-~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA-EFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQES 270 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE-CCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEe-ccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccc
Confidence 44 99999986542212221 11123335778999999999888764 67899999987
Q ss_pred ----CC-cCceeecce--eEEEEcCCCCCcEEEEecCC---CeEEEEecccCCc-ceeEeeCCCC--ceeEEEecCCCCC
Q 018697 200 ----MG-KTNSIEHAH--VRNVDYDTKKKHLLVTAADE---SGIHLWDLRMLKA-PIQELPGHTH--WTWAVCCNPEYDG 266 (351)
Q Consensus 200 ----~~-~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~-~~~~~~~~~~--~v~~~~~~~~~~~ 266 (351)
+. ....+.... +.. .|+|+|+.+++.+..+ +.|.+||+..... ....+..|.. .+..+.|++++ .
T Consensus 271 ~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~ 348 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN-F 348 (710)
T ss_dssp SSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT-E
T ss_pred cccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC-E
Confidence 43 344444222 333 4788888555554433 4799999876331 2355555544 68889999777 8
Q ss_pred eEEEeeCCCe--EEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEee---eCCeEEE
Q 018697 267 FILSAGTDST--VNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS---YDGRVVV 341 (351)
Q Consensus 267 ~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~v~v 341 (351)
++++...|+. |.+||+.. ++.+..+..+...+..++++|++..++++.+ ..+.|++
T Consensus 349 lv~~~~~~g~~~l~~~~~~~-------------------g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 409 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQLHDLAT-------------------GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYH 409 (710)
T ss_dssp EEEEEEETTEEEEEEEETTT-------------------CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEE
T ss_pred EEEEEEECCEEEEEEEECCC-------------------CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEE
Confidence 8889888885 55566655 5556666667778899999999874554443 3578999
Q ss_pred eecCc
Q 018697 342 ESVKP 346 (351)
Q Consensus 342 w~~~~ 346 (351)
||+.+
T Consensus 410 ~d~~t 414 (710)
T 2xdw_A 410 CDLTK 414 (710)
T ss_dssp EETTS
T ss_pred EECCC
Confidence 99864
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=1.8e-17 Score=143.89 Aligned_cols=247 Identities=9% Similarity=-0.045 Sum_probs=155.5
Q ss_pred EeeecCCcceee-----eeeCCCCCceEEEEeecCCcc--eEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC
Q 018697 59 EGLFSHPNEIWD-----LSSCPFDQRIFSTVFSTGESY--GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS 131 (351)
Q Consensus 59 ~~~~~h~~~v~~-----i~~~~~~~~l~~~~~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 131 (351)
..+..|...... .+|+||++.|+.+. ..++ .|.+||+. ..+.......+...+..+.|+|+
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~---~~~g~~~l~~~d~~---------~g~~~~lt~~~~~~~~~~~~spd 91 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGG---AFDGPWNYYLLDLN---------TQVATQLTEGRGDNTFGGFLSPD 91 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEE---CTTSSCEEEEEETT---------TCEEEECCCSSCBCSSSCEECTT
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEE---cCCCCceEEEEeCC---------CCceEEeeeCCCCCccceEEcCC
Confidence 344556655555 89999999998873 3355 47777776 45555555566666667889999
Q ss_pred CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceee--eEECCCCCcEEEe----------------------e
Q 018697 132 GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSG--GAWDPHDVNAVAA----------------------T 187 (351)
Q Consensus 132 ~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~----------------------~ 187 (351)
++. ++.++.++.|++||+.++.... +.... ...+.. ..++|++..++.. .
T Consensus 92 g~~-l~~~~~~~~l~~~d~~~g~~~~-~~~~~----~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 92 DDA-LFYVKDGRNLMRVDLATLEENV-VYQVP----AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp SSE-EEEEETTTEEEEEETTTCCEEE-EEECC----TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred CCE-EEEEeCCCeEEEEECCCCccee-eeech----hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccC
Confidence 995 5555667899999999754322 21111 112322 3348888877643 2
Q ss_pred cCCeEEEEEcccCCcCceeecce-eEEEEcCC-CCCcEEEEecC------CCeEEEEecccCCcceeEeeCCC--CceeE
Q 018697 188 CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDT-KKKHLLVTAAD------ESGIHLWDLRMLKAPIQELPGHT--HWTWA 257 (351)
Q Consensus 188 ~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~-~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~--~~v~~ 257 (351)
.+..|.+||+.+++......... +..++|+| +++ .++.... ...|.++|... . ....+..+. ..+..
T Consensus 166 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 166 PCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDG-T-NMRKVKTHAEGESCTH 242 (388)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTS-C-CCEESCCCCTTEEEEE
T ss_pred CcceEEEEECCCCceEEeecCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCC-C-ceEEeeeCCCCccccc
Confidence 34689999999886544443333 88999999 998 4554443 33778888764 3 344554444 35788
Q ss_pred EEecCCCCCeEEE-eeCCC----eEEEEEcCCCCCCCCCCcccccCCcccccc--cceeeccccce---EEEEEeCCCCC
Q 018697 258 VCCNPEYDGFILS-AGTDS----TVNLWLVSTSNHDELPSESLVESPNQRANS--LLNSYSDYEDS---VYGLAWSSREP 327 (351)
Q Consensus 258 ~~~~~~~~~~l~s-~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---v~~~~~~~~~~ 327 (351)
+.|+|+| ..|+. +..++ .|.+||+.. ++ .+..+..+... ...+.|+|+|+
T Consensus 243 ~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~-------------------g~~~~l~~~~~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 243 EFWVPDG-SALVYVSYLKGSPDRFIYSADPET-------------------LENRQLTSMPACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp EEECTTS-SCEEEEEEETTCCCEEEEEECTTT-------------------CCEEEEEEECCEEEEEECTTSSEEEEEEC
T ss_pred ceECCCC-CEEEEEecCCCCCcceEEEEecCC-------------------CceEEEEcCCCceeeeecCCCCeEccCCC
Confidence 9999999 65544 33322 399999987 33 23233321111 12347999998
Q ss_pred ceEEEe--------eeCCeEEEeecCc
Q 018697 328 WIFASL--------SYDGRVVVESVKP 346 (351)
Q Consensus 328 ~~l~s~--------~~dg~v~vw~~~~ 346 (351)
.++++. ..+..|++||+..
T Consensus 303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 303 DAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp CC------------CCCCEEEEEETTT
T ss_pred cceeEeeeccccccCCCCEEEEEeccC
Confidence 544433 4567899999875
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=1.4e-17 Score=144.75 Aligned_cols=277 Identities=8% Similarity=0.018 Sum_probs=165.6
Q ss_pred eeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcce-eeeeeCCCCCceEEEEeecCCcceEEEEEc
Q 018697 20 SDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEI-WDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (351)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v-~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (351)
..+.++|++.++++.... .....++++++.. +.. ..+..+...+ ..+.|+|+++.|+.+ +.++.|.+|++
T Consensus 39 ~~~~~SpdG~~l~~~~~~-~g~~~l~~~d~~~--~~~--~~l~~~~~~~~~~~~~spdg~~l~~~----~~~~~l~~~d~ 109 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDF-DGNRNYYLLNLET--QQA--VQLTEGKGDNTFGGFISTDERAFFYV----KNELNLMKVDL 109 (396)
T ss_dssp TSCCBCTTSCEEEEEECT-TSSCEEEEEETTT--TEE--EECCCSSCBCTTTCEECTTSSEEEEE----ETTTEEEEEET
T ss_pred ecCcCCCCCCEEEEEEec-CCCceEEEEECCC--CcE--EEeecCCCCccccceECCCCCEEEEE----EcCCcEEEEEC
Confidence 345577888888776432 2234566666543 322 2333344443 348899999999876 35668999998
Q ss_pred ccccCCCCCCcceeeeeeeccccceeE-------------------EEecCCCCCcEEEE----ecCCcEEEEEcCCCCC
Q 018697 99 PELYGQLNSPQLERIAALDAHVGKINC-------------------VLWWSSGRHDKLVS----IDEENIFLWSLDCSNK 155 (351)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~~~~~~----~~d~~v~iwd~~~~~~ 155 (351)
. ..+.......+...... +.|+|+++.+++.. ..+..|++||+.++..
T Consensus 110 ~---------~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (396)
T 3c5m_A 110 E---------TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL 180 (396)
T ss_dssp T---------TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE
T ss_pred C---------CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE
Confidence 7 33333333333332222 35788887533332 3467899999986442
Q ss_pred CcccccccccCcccceeeeEECC-CCCcEEEeecC------CeEEEEEcccCCcCceeec--ce-eEEEEcCCCCCcEEE
Q 018697 156 NAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCE------SSVQFWDLRSMGKTNSIEH--AH-VRNVDYDTKKKHLLV 225 (351)
Q Consensus 156 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~--~~-v~~~~~~~~~~~~l~ 225 (351)
. .+. .+...+..+.|+| +++.|+..+.+ ..|.+||+..++....... .. +..++|+|+++.+++
T Consensus 181 ~-~~~-----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (396)
T 3c5m_A 181 E-VIH-----QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAY 254 (396)
T ss_dssp E-EEE-----EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEE
T ss_pred E-eec-----cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEE
Confidence 2 222 1233688899999 78877766543 4688889876543222221 22 888999999985444
Q ss_pred EecCC----CeEEEEecccCCcceeEeeCCCCceeEEEecC-CCCCeEEEee----------------CCCeEEEEEcCC
Q 018697 226 TAADE----SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNP-EYDGFILSAG----------------TDSTVNLWLVST 284 (351)
Q Consensus 226 ~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~----------------~dg~i~iwd~~~ 284 (351)
++..+ +.|++||+.+ ++. ..+..... .. +.|+| +| .+++.++ .+..|.+||+..
T Consensus 255 ~~~~~~~~~~~l~~~d~~~-g~~-~~l~~~~~-~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 255 VSYFKGQTDRVIYKANPET-LEN-EEVMVMPP-CS-HLMSNFDG-SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EEEETTTCCEEEEEECTTT-CCE-EEEEECCS-EE-EEEECSSS-SEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred EecCCCCccceEEEEECCC-CCe-EEeeeCCC-CC-CCccCCCC-ceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 43322 4499999976 432 22221222 33 88999 99 6777654 346899999986
Q ss_pred CCCCCCCCcccccCCcccccccceeeccccc-----------eEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 285 SNHDELPSESLVESPNQRANSLLNSYSDYED-----------SVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
++. ..+..+.. .+..++|+|+|+.++++...++...+|.++
T Consensus 330 -------------------~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 330 -------------------KSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp -------------------TBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred -------------------Cce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 332 23333332 256688999998444444456666666543
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=3e-16 Score=134.72 Aligned_cols=276 Identities=8% Similarity=-0.019 Sum_probs=174.4
Q ss_pred CcceEEEeeeee--CCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEee------cCCcceEEEEEc
Q 018697 27 DHTSFLTGTLSL--KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS------TGESYGAAIWQI 98 (351)
Q Consensus 27 ~~~~~~~g~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~------~~~d~~i~vw~~ 98 (351)
+..++++..... ..++.+++|+... .++. ..+..+..+ .++|+|++++++++... |..++.|.+||.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t--~~~~-~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTN--GKFL-GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTT--CCEE-EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCEEEEECCCCCccccCeEEEEECCC--CeEE-EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 455666654321 1356888887543 3333 444444444 89999999999887421 124678999998
Q ss_pred ccccCCCCCCcceeeeeeecc------ccceeEEEecCCCCCcEEEEec-CCcEEEEEcCCCCCCcccccccccCcccce
Q 018697 99 PELYGQLNSPQLERIAALDAH------VGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYL 171 (351)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v 171 (351)
. +.+.+.++... ......++++|+|++++++... ++.|.+||+.+.+....+.... ..
T Consensus 89 ~---------t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~------~~ 153 (361)
T 2oiz_A 89 D---------KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA------GC 153 (361)
T ss_dssp T---------TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT------TE
T ss_pred c---------CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC------Cc
Confidence 7 55666665432 2456789999999974444443 6899999999753322201111 12
Q ss_pred eeeEECCCC-CcEEEeecCCeEEEEEccc-CCcCc------eeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCC
Q 018697 172 SGGAWDPHD-VNAVAATCESSVQFWDLRS-MGKTN------SIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242 (351)
Q Consensus 172 ~~~~~~~~~-~~l~~~~~d~~i~iwd~~~-~~~~~------~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 242 (351)
..+.+.|++ ..+++.+.||.+.+|++.. ++... .+.... ...+.++|++. .++..+.++.+.++|+....
T Consensus 154 ~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~ 232 (361)
T 2oiz_A 154 WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKD-KAHFVSYYGNVYSADFSGDE 232 (361)
T ss_dssp EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSS-EEEEEBTTSEEEEEECSSSS
T ss_pred ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCC-EEEEEeCCCeEEEEEecCCC
Confidence 235567766 4567778899999999865 33321 111111 22334456676 44556678899999986422
Q ss_pred c-ceeEeeCCC----------CceeEEEecCCCCCeEEEeeC-----------CCeEEEEEcCCCCCCCCCCcccccCCc
Q 018697 243 A-PIQELPGHT----------HWTWAVCCNPEYDGFILSAGT-----------DSTVNLWLVSTSNHDELPSESLVESPN 300 (351)
Q Consensus 243 ~-~~~~~~~~~----------~~v~~~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (351)
. .+..+.... .....++|+|++ ..++.+.. .+.|.+||+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg-~~lyv~~~~~~~~~~~~~~~~~v~viD~~t---------------- 295 (361)
T 2oiz_A 233 VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS-GRMYVFMHPDGKEGTHKFPAAEIWVMDTKT---------------- 295 (361)
T ss_dssp CEEEEEEESCCHHHHHTTCEECCSSCEEEETTT-TEEEEEEESSCCTTCTTCCCSEEEEEETTT----------------
T ss_pred ceecccccccCccccccccccCCeeEEEEecCC-CeEEEEEccCCCcccccCCCceEEEEECCC----------------
Confidence 1 112221100 111237899998 44444332 34899999998
Q ss_pred ccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
.+.+.++..+. +.+++|+|+|+ +|++++. +.|.+||+.+.
T Consensus 296 ---~~~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 296 ---KQRVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp ---TEEEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECSSS
T ss_pred ---CcEEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECCCC
Confidence 88888888776 89999999999 6666665 99999998765
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=7e-16 Score=128.82 Aligned_cols=240 Identities=8% Similarity=-0.091 Sum_probs=160.9
Q ss_pred ecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEec
Q 018697 62 FSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141 (351)
Q Consensus 62 ~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 141 (351)
..+.....+++|+|+++.|+.+ +..++.|.+|+.. .. ...+..+...+.++++++++. ++++...
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~---~~~~~~i~~~~~~---------~~--~~~~~~~~~~~~~l~~~~dg~-l~v~~~~ 88 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFS---DVRQNRTWAWSDD---------GQ--LSPEMHPSHHQNGHCLNKQGH-LIACSHG 88 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEE---EGGGTEEEEEETT---------SC--EEEEESSCSSEEEEEECTTCC-EEEEETT
T ss_pred ecCCccccCCeEeCCCCEEEEE---eCCCCEEEEEECC---------CC--eEEEECCCCCcceeeECCCCc-EEEEecC
Confidence 3455667899999999855554 3678899999987 32 455666778899999999998 3444455
Q ss_pred CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEE----ee-------------cCCeEEEEEcccCCcCc
Q 018697 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA----AT-------------CESSVQFWDLRSMGKTN 204 (351)
Q Consensus 142 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~-------------~d~~i~iwd~~~~~~~~ 204 (351)
++.|.+||..++... .+...........+.+++++|+|+.+++ ++ ..+.|..++.. ++. .
T Consensus 89 ~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~ 165 (296)
T 3e5z_A 89 LRRLERQREPGGEWE-SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-S 165 (296)
T ss_dssp TTEEEEECSTTCCEE-EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-E
T ss_pred CCeEEEEcCCCCcEE-EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-E
Confidence 689999999755422 2211111111225678999999987776 32 13456666654 332 2
Q ss_pred eeecce--eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcc---eeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEE
Q 018697 205 SIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP---IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 279 (351)
Q Consensus 205 ~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~i 279 (351)
.+.... +..++|+|+++ ++++.+.++.|++||+...+.. ...+..+...+..++++++| .++++. ++.|.+
T Consensus 166 ~~~~~~~~~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~ 241 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGN-LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGVHV 241 (296)
T ss_dssp EEECCCSSEEEEEECTTSC-EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEEEE
T ss_pred EeecCCCCCccEEECCCCC-EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeEEE
Confidence 222122 88999999998 5588888899999998732332 22333345567889999999 766655 788999
Q ss_pred EEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEe-CCCCCceEEEeeeCCeEEEeecCc
Q 018697 280 WLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAW-SSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
||.. ++.+..+..+.. +.+++| .|+++ .|..++.+ .+..++..+
T Consensus 242 ~~~~--------------------g~~~~~~~~~~~-~~~~~f~~~d~~-~L~v~t~~-~l~~~~~~~ 286 (296)
T 3e5z_A 242 LTPD--------------------GDELGRVLTPQT-TSNLCFGGPEGR-TLYMTVST-EFWSIETNV 286 (296)
T ss_dssp ECTT--------------------SCEEEEEECSSC-CCEEEEESTTSC-EEEEEETT-EEEEEECSC
T ss_pred ECCC--------------------CCEEEEEECCCC-ceeEEEECCCCC-EEEEEcCC-eEEEEEccc
Confidence 9985 456666766666 899999 68887 56666655 344445544
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=3.4e-15 Score=126.76 Aligned_cols=237 Identities=11% Similarity=0.012 Sum_probs=155.3
Q ss_pred EeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEE
Q 018697 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 59 ~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 138 (351)
..+..+...+.+++|+|+++.+++. ..++.|.+|+.. ..+.......+...+.+++++|++. ++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~----~~~~~i~~~d~~---------~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~ 103 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLD----VFEGNIFKINPE---------TKEIKRPFVSHKANPAAIKIHKDGR-LFVC 103 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEE----TTTCEEEEECTT---------TCCEEEEEECSSSSEEEEEECTTSC-EEEE
T ss_pred EEEeccCccccCcEECCCCCEEEEE----CCCCEEEEEeCC---------CCcEEEEeeCCCCCcceEEECCCCc-EEEE
Confidence 3445566778999999998755443 577899999976 3333333335667899999999997 3444
Q ss_pred EecC----CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec------CCeEEEEEcccCCcCceeec
Q 018697 139 SIDE----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC------ESSVQFWDLRSMGKTNSIEH 208 (351)
Q Consensus 139 ~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~ 208 (351)
+..+ +.|.+||..+.... ...... .....+.+++++|+++.+++... .+.|..+|..+++.......
T Consensus 104 ~~~~~~~~~~i~~~d~~~~~~~-~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (333)
T 2dg1_A 104 YLGDFKSTGGIFAATENGDNLQ-DIIEDL--STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN 180 (333)
T ss_dssp ECTTSSSCCEEEEECTTSCSCE-EEECSS--SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE
T ss_pred eCCCCCCCceEEEEeCCCCEEE-EEEccC--ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC
Confidence 4444 58999998754322 111111 12336889999999876665543 35666666654443222221
Q ss_pred ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeE--------eeCCCCceeEEEecCCCCCeEEEeeCCCeEEE
Q 018697 209 AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE--------LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 279 (351)
Q Consensus 209 ~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~i 279 (351)
.. +..++|+|+++.++++...++.|.+||++..+..+.. +.++ ..+..++++++| .++++...++.|.+
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLV 258 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEE
T ss_pred CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEE
Confidence 12 8899999999855566667889999998642322221 1122 467889999999 78887777889999
Q ss_pred EEcCCCCCCCCCCcccccCCcccccccceeeccccc------eEEEEEeCCCCCceEEEee
Q 018697 280 WLVSTSNHDELPSESLVESPNQRANSLLNSYSDYED------SVYGLAWSSREPWIFASLS 334 (351)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~s~~ 334 (351)
||.. ++.+..+..+.. .+.+++|+|++..++++..
T Consensus 259 ~d~~--------------------g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 259 FNKR--------------------GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp ECTT--------------------SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred ECCC--------------------CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 9984 344444433322 5889999999874444444
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=7.8e-16 Score=126.63 Aligned_cols=241 Identities=11% Similarity=0.002 Sum_probs=163.3
Q ss_pred ceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEE
Q 018697 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIF 146 (351)
Q Consensus 67 ~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~ 146 (351)
...++++++++..++++ ...++.|.+|+.. ..........+...+.++++.+++. ++++.. ++.|.
T Consensus 25 ~p~~i~~~~~g~l~v~~---~~~~~~i~~~~~~---------~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~ 90 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTS---EGMYGRVVKLATG---------STGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVV 90 (270)
T ss_dssp CEEEEEECTTCCEEEEE---CSSSCEEEEECC--------------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEE
T ss_pred CccceEECCCCCEEEEc---cCCCCcEEEecCC---------CcccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEE
Confidence 67889999998755413 3567889999865 2221111123335678899999988 344445 88999
Q ss_pred EEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecc-e-eEEEEcCCCCCcEE
Q 018697 147 LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLL 224 (351)
Q Consensus 147 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l 224 (351)
+||...... .. ... .....+.+++++++++.+++...++.|.+|+..+.......... . +..+++++++. ++
T Consensus 91 ~~d~~~~~~-~~-~~~---~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 91 TLAAGSNNQ-TV-LPF---DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp EECTTCSCC-EE-CCC---CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EE
T ss_pred EEeCCCceE-ee-eec---CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EE
Confidence 999875322 11 111 11236889999999886666567889999976554332211111 2 78999999997 77
Q ss_pred EEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccc
Q 018697 225 VTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (351)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
++...++.|.+||... .........+...+..++++++| .++++...++.|.+||... .
T Consensus 165 v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~-------------------~ 223 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGS-------------------T 223 (270)
T ss_dssp EEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTC-------------------S
T ss_pred EEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCC-------------------C
Confidence 7777788999999875 32222222333668899999999 8888888888999999865 2
Q ss_pred ccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcccc
Q 018697 305 SLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLS 349 (351)
Q Consensus 305 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~ 349 (351)
........+...+.+++++++|. ++++...++.|+++++.....
T Consensus 224 ~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 224 TSTVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCEECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGS
T ss_pred cceeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCccc
Confidence 22222222334689999999998 888988999999999986543
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.76 E-value=7.1e-16 Score=131.72 Aligned_cols=267 Identities=10% Similarity=0.079 Sum_probs=159.7
Q ss_pred eEeeeecCCCCcceEEEeeeeeC-----CCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecC-Cc
Q 018697 17 RCISDVKADTDHTSFLTGTLSLK-----EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG-ES 90 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~-~d 90 (351)
+.+....+ ++.++++...... ....|+++++.... . ..+ ..+..++|+|+++.|+.+...++ ..
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--~--~~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA--R--RFI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC--E--EEE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc--e--EEc----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 33444444 6666666433221 13456666655432 2 122 56888999999999887642211 12
Q ss_pred ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEec--------------------------CCc
Q 018697 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID--------------------------EEN 144 (351)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~--------------------------d~~ 144 (351)
..|.+|++. ..+..... .+.. +..++|+|+++.+++++.. ...
T Consensus 85 ~~l~~~~~~---------~g~~~~l~-~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 153 (347)
T 2gop_A 85 SEIWVADLE---------TLSSKKIL-EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTT 153 (347)
T ss_dssp EEEEEEETT---------TTEEEEEE-EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEE
T ss_pred ceEEEEECC---------CCceEEEE-cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccce
Confidence 346677765 33433333 3333 9999999999964444322 257
Q ss_pred EEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC------C-eEEEEEcccCCcCceeecce-eEEEEc
Q 018697 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE------S-SVQFWDLRSMGKTNSIEHAH-VRNVDY 216 (351)
Q Consensus 145 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~-~i~iwd~~~~~~~~~~~~~~-v~~~~~ 216 (351)
|++||+.++.....+.. . .+..+.|+|++ .++++..+ . ...+|.+.+++. ..+.... +..+
T Consensus 154 l~~~d~~~~~~~~~l~~------~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~~~~~~~-- 222 (347)
T 2gop_A 154 FWIFDTESEEVIEEFEK------P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEKVSFYAV-- 222 (347)
T ss_dssp EEEEETTTTEEEEEEEE------E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEEESEEEE--
T ss_pred EEEEECCCCeEEeeecC------C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccCcceeeE--
Confidence 88999976432122211 1 57788999999 66666543 2 345554444432 2222113 4444
Q ss_pred CCCCCcEEEEecC-------CCeEEEEecccCCcceeEeeCCCCceeE-EEecCCCCCeEEEeeCCCeEEEEEcCCCCCC
Q 018697 217 DTKKKHLLVTAAD-------ESGIHLWDLRMLKAPIQELPGHTHWTWA-VCCNPEYDGFILSAGTDSTVNLWLVSTSNHD 288 (351)
Q Consensus 217 ~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 288 (351)
+|+|+.+++.+.. ...|.+|| . ++.......+...+.. +.|+ ++ ++++++.++.++|| +..
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~---- 291 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWD---- 291 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EES----
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcC----
Confidence 8999854444433 24688888 3 4433334456677886 8999 65 88888999999999 874
Q ss_pred CCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeE-EEeecC
Q 018697 289 ELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRV-VVESVK 345 (351)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v-~vw~~~ 345 (351)
++..... .+...|.+++|+| . ++++++.++.. .+|.++
T Consensus 292 ---------------g~~~~~~-~~~~~v~~~~~s~--~-~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 292 ---------------GEIKPIA-KGRHWIMGFDVDE--I-VVYLKETATRLRELFTWD 330 (347)
T ss_dssp ---------------SSEEEEE-CSSSEEEEEEESS--S-EEEEEECSSSCCEEEEES
T ss_pred ---------------CceEEEe-cCCCeEEeeeeeC--c-EEEEEcCCCChHHheEeC
Confidence 4433333 3467799999999 5 67777766654 677653
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=2.2e-16 Score=148.45 Aligned_cols=240 Identities=13% Similarity=0.123 Sum_probs=150.9
Q ss_pred eecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcce-----eeeeeCCCCCceEEEEeec-----CCc
Q 018697 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEI-----WDLSSCPFDQRIFSTVFST-----GES 90 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v-----~~i~~~~~~~~l~~~~~~~-----~~d 90 (351)
.+.+.+++..++.+ ++.|.+|++...... ..+.+|.... .+++||||++.|+...... +..
T Consensus 21 ~~~w~~dg~~~~~~------~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ------ENNILVFNAEYGNSS---VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CEEECSSSEEEEEE------TTEEEEEETTTCCEE---EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccEECCCCcEEEEc------CCcEEEEECCCCceE---EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 34455666544432 688999998765432 3345555332 3467899999988863110 011
Q ss_pred ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccc----ccC
Q 018697 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ----SSG 166 (351)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~----~~~ 166 (351)
+.+.+||+. +.+. ..+..|...+..++|||||+. + +...++.|++|++.++.......... ..+
T Consensus 92 ~~~~~~d~~---------~~~~-~~l~~~~~~~~~~~~SPdG~~-l-a~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g 159 (740)
T 4a5s_A 92 ASYDIYDLN---------KRQL-ITEERIPNNTQWVTWSPVGHK-L-AYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNG 159 (740)
T ss_dssp EEEEEEETT---------TTEE-CCSSCCCTTEEEEEECSSTTC-E-EEEETTEEEEESSTTSCCEECCSCCBTTTEEES
T ss_pred eEEEEEECC---------CCcE-EEcccCCCcceeeEECCCCCE-E-EEEECCeEEEEECCCCceEEEcCCCCccceecC
Confidence 567799998 3343 346677888999999999996 3 33357899999998654322111111 011
Q ss_pred cc---------cceeeeEECCCCCcEEEeecC-C-----------------------------------eEEEEEccc--
Q 018697 167 ML---------HYLSGGAWDPHDVNAVAATCE-S-----------------------------------SVQFWDLRS-- 199 (351)
Q Consensus 167 ~~---------~~v~~~~~~~~~~~l~~~~~d-~-----------------------------------~i~iwd~~~-- 199 (351)
+. ....++.|+|||+.|+.++.| . .|++||+.+
T Consensus 160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~ 239 (740)
T 4a5s_A 160 ITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS 239 (740)
T ss_dssp BCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCC
T ss_pred cccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCC
Confidence 11 122458999999999887522 1 588899988
Q ss_pred -CCc--Cceeec-------ce-eEEEEcCCCCCcEEEEec----CCCeEEEEecccCCc------ceeEe--eCCCCcee
Q 018697 200 -MGK--TNSIEH-------AH-VRNVDYDTKKKHLLVTAA----DESGIHLWDLRMLKA------PIQEL--PGHTHWTW 256 (351)
Q Consensus 200 -~~~--~~~~~~-------~~-v~~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~------~~~~~--~~~~~~v~ 256 (351)
++. ...+.. .. +..++|+|+|+ +++... .+..|++||+.+ ++ .+..+ ..|...|.
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~t-g~~~~~~~~~~~l~~~~~~~~v~ 317 (740)
T 4a5s_A 240 SVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDE-SSGRWNCLVARQHIEMSTTGWVG 317 (740)
T ss_dssp SSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEET-TTTEEEECGGGCEEEECSSSCSS
T ss_pred CCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCC-CccccceeEEEEeeeccCCceEc
Confidence 632 222321 22 89999999998 455432 234799999987 43 12222 45666655
Q ss_pred -----EEEecCCCCCeEE-Eee-CCC--eEEEEEcCC
Q 018697 257 -----AVCCNPEYDGFIL-SAG-TDS--TVNLWLVST 284 (351)
Q Consensus 257 -----~~~~~~~~~~~l~-s~~-~dg--~i~iwd~~~ 284 (351)
.+.|+|+| ..|+ ..+ .+| .|.+||...
T Consensus 318 ~~~~~~p~fspDG-~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 318 RFRPSEPHFTLDG-NSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp SSSCCCCEECTTS-SEEEEEEECTTSCEEEEEEETTC
T ss_pred cCcCCCceEcCCC-CEEEEEEEcCCCceEEEEEECCC
Confidence 78999999 6554 554 444 577778765
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.75 E-value=6.8e-16 Score=144.12 Aligned_cols=285 Identities=8% Similarity=-0.048 Sum_probs=176.2
Q ss_pred CCcceEEEeeeeeCCC-CEEEEEEeCCCCCeEEEE---eeecCCcceeeeeeCCCCCceEEEEee-cCCcceEEEEEccc
Q 018697 26 TDHTSFLTGTLSLKEE-NEVHLLRLSSGGTELICE---GLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYGAAIWQIPE 100 (351)
Q Consensus 26 ~~~~~~~~g~~~~~~~-~~i~~~~~~~~~~~~~~~---~~~~h~~~v~~i~~~~~~~~l~~~~~~-~~~d~~i~vw~~~~ 100 (351)
+++.+++......+.+ ..++...........+.. ...+|...+..++|||||+.|+.+... |+.+..|++||+.
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~- 155 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD- 155 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT-
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC-
Confidence 5677777655433322 333333332222222211 012455679999999999998876543 3446789999998
Q ss_pred ccCCCCCCcceeeeeeeccccce--eEEEecCCCCCcEEEEecCCc-------------EEEEEcCCCCCCccccccccc
Q 018697 101 LYGQLNSPQLERIAALDAHVGKI--NCVLWWSSGRHDKLVSIDEEN-------------IFLWSLDCSNKNAQVQSKQSS 165 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~~~~~~~d~~-------------v~iwd~~~~~~~~~~~~~~~~ 165 (351)
+++.+. ..+...+ ..++|+|||+. ++.++.|.. |++|++.++.....+.. ...
T Consensus 156 --------tg~~~~--~~~~~~~~~~~~~wspDg~~-l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~-~~~ 223 (695)
T 2bkl_A 156 --------SGEWSK--VDVIEGGKYATPKWTPDSKG-FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH-ERT 223 (695)
T ss_dssp --------TCCBCS--SCCBSCCTTCCCEECTTSSE-EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE-CCC
T ss_pred --------CCCCcC--CcccCcccccceEEecCCCE-EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE-ecC
Confidence 333320 1111122 67899999995 555555554 99999987543222221 122
Q ss_pred CcccceeeeEECCCCCcEEEeecCC----eEEEEEcccCCcCceeecce--eEEEEcCCCCCcEEEEec---CCCeEEEE
Q 018697 166 GMLHYLSGGAWDPHDVNAVAATCES----SVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAA---DESGIHLW 236 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~---~dg~i~i~ 236 (351)
++...+.++.|+|+|++|+.++.++ .|++||..+++. ..+.... +....+ +++. +++... .++.|.+|
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEE
Confidence 3334678999999999998887655 677776655433 3333222 455555 6777 666655 35899999
Q ss_pred ecccCCc-ceeEeeCC--CCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccc
Q 018697 237 DLRMLKA-PIQELPGH--THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY 313 (351)
Q Consensus 237 d~~~~~~-~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (351)
|+..... ....+..+ ...+..++|+ ++ .++++...|+..+||.+... +.....+..+
T Consensus 301 d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~------------------g~~~~~l~~~ 360 (695)
T 2bkl_A 301 DPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLK------------------GKPVRTVQLP 360 (695)
T ss_dssp BTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETT------------------CCEEEECCCS
T ss_pred eCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCC------------------CCeeEEecCC
Confidence 9976321 12444433 4567888888 55 78899999999988877630 3334444444
Q ss_pred -cceEEEEEeCCCCCceEEEee---eCCeEEEeecCc
Q 018697 314 -EDSVYGLAWSSREPWIFASLS---YDGRVVVESVKP 346 (351)
Q Consensus 314 -~~~v~~~~~~~~~~~~l~s~~---~dg~v~vw~~~~ 346 (351)
...+..++++|+++.++++.+ ..+.|++||+.+
T Consensus 361 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 361 GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 566888999999874444443 357899999864
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=2.5e-15 Score=128.96 Aligned_cols=266 Identities=12% Similarity=0.036 Sum_probs=176.6
Q ss_pred eecCCCCcceEEEeeeeeC------CCCEEEEEEeCCCCCeEEEEeeec------CCcceeeeeeCCCCCceEEEEeecC
Q 018697 21 DVKADTDHTSFLTGTLSLK------EENEVHLLRLSSGGTELICEGLFS------HPNEIWDLSSCPFDQRIFSTVFSTG 88 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~------h~~~v~~i~~~~~~~~l~~~~~~~~ 88 (351)
.+.+++++.+++++..... .++.|.+|+.... ... ..+.. +......++++|++++|+++. .+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~--~~~-~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n--~~ 128 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL--TFE-KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN--AS 128 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC--CEE-EEEEECTTBCCBCCCGGGEEECTTSSEEEEEE--ES
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC--cEE-EEEEcCccccccCCCcceEEECCCCCEEEEEC--CC
Confidence 6778899988888753211 2456887876532 222 22221 234677899999999998873 12
Q ss_pred CcceEEEEEcccccCCCCCCcceeeee-eeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccc--cccc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAA-LDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS--KQSS 165 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~--~~~~ 165 (351)
.++.|.+||+. +.+.+.. +.. . ....+.+.|++...+++.+.||.+.+|++........... ....
T Consensus 129 ~~~~v~v~d~~---------~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 129 PATSIGIVDVA---------KGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp SSEEEEEEETT---------TTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred CCCeEEEEECC---------CCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 36799999998 5566665 432 2 2233567888765566668899999999875333221100 0000
Q ss_pred CcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcC--ceee--c------c---e-eEEEEcCCCCCcEEEEec---
Q 018697 166 GMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT--NSIE--H------A---H-VRNVDYDTKKKHLLVTAA--- 228 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~--~------~---~-v~~~~~~~~~~~~l~~~~--- 228 (351)
....+ ..+.+++++..++..+.++.+.++|+...... ..+. . . . ...++++|+++.++++..
T Consensus 198 ~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 198 VKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp TTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred CCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 00111 23344567777777778899999998754321 1111 0 0 0 223789999885555443
Q ss_pred -------CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcc
Q 018697 229 -------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQ 301 (351)
Q Consensus 229 -------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (351)
..+.|.+||+.+ .+.+.++..+. +..++|+|+| ++|++++. +.|.+||..+
T Consensus 277 ~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg-~~l~v~n~-~~v~v~D~~t----------------- 334 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQR-NLMLTLDG-GNVNVYDISQ----------------- 334 (361)
T ss_dssp CTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTT-TEEEEECS-SCEEEEECSS-----------------
T ss_pred CcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCC-CEEEEeCC-CeEEEEECCC-----------------
Confidence 135899999998 67888888776 8999999999 78888876 9999999998
Q ss_pred ccc--ccceeeccccceEEEEEeCCCCC
Q 018697 302 RAN--SLLNSYSDYEDSVYGLAWSSREP 327 (351)
Q Consensus 302 ~~~--~~~~~~~~~~~~v~~~~~~~~~~ 327 (351)
+ +.+..+..+....+.++++|+|.
T Consensus 335 --~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 335 --PEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp --SSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred --CcceeeEEeccCCCCcEEEEecCCCC
Confidence 7 88888766666788999999986
No 180
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.74 E-value=6e-15 Score=124.10 Aligned_cols=247 Identities=7% Similarity=-0.036 Sum_probs=162.1
Q ss_pred CcceeeeeeCCCCCceEEE---EeecCCcceEEEEEcccccCCCCCCcceeeeeee-----ccccceeEEEecCC-CCCc
Q 018697 65 PNEIWDLSSCPFDQRIFST---VFSTGESYGAAIWQIPELYGQLNSPQLERIAALD-----AHVGKINCVLWWSS-GRHD 135 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~---~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~-~~~~ 135 (351)
-....+++|.+++..+++. ...+..++.|.+|+.. ..+.. .+. ++...+.+++++++ +.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~---------~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~-- 84 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK---------TGKKT-VICKPEVNGYGGIPAGCQCDRDANQ-- 84 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTT---------TCCEE-EEECCEETTEECCEEEEEECSSSSE--
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCC---------CCcEE-EEEecccCCCCCCCceEEEecCCCc--
Confidence 3466789999888665550 0001256789999875 22221 222 24567899999999 66
Q ss_pred EEEEecCCcEEEEEcCCCCCCccc-ccccccCcccceeeeEECCCCCcEEEeecC---------------CeEEEEEccc
Q 018697 136 KLVSIDEENIFLWSLDCSNKNAQV-QSKQSSGMLHYLSGGAWDPHDVNAVAATCE---------------SSVQFWDLRS 199 (351)
Q Consensus 136 ~~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~ 199 (351)
++++.....|.+||.. +. ...+ ...........+.+++++++++.+++...+ +.|..||..
T Consensus 85 l~v~~~~~~l~~~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 85 LFVADMRLGLLVVQTD-GT-FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EEEEETTTEEEEEETT-SC-EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EEEEECCCCEEEEeCC-CC-EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 4444434579999987 33 2222 111111112358899999999876665544 567777765
Q ss_pred CCcCceeecce-eEEEEcC----CCCCcEEEEecCCCeEEEEecccCCc-----ceeEeeCCC-CceeEEEecCCCCCeE
Q 018697 200 MGKTNSIEHAH-VRNVDYD----TKKKHLLVTAADESGIHLWDLRMLKA-----PIQELPGHT-HWTWAVCCNPEYDGFI 268 (351)
Q Consensus 200 ~~~~~~~~~~~-v~~~~~~----~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~-~~v~~~~~~~~~~~~l 268 (351)
++......... ...++++ |+++.++++...++.|.+||+...+. ....+..+. ..+..++++++| .++
T Consensus 162 g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~l~ 240 (314)
T 1pjx_A 162 GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN-NLL 240 (314)
T ss_dssp SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC-CEE
T ss_pred CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC-CEE
Confidence 44322222112 7888999 99974566667789999999863232 222333333 567889999999 888
Q ss_pred EEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 269 LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 269 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++...++.|.+||..+ ++.+..+..+...+.+++|+|++..++++...++.|..|++..
T Consensus 241 v~~~~~~~i~~~d~~~-------------------g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 241 VANWGSSHIEVFGPDG-------------------GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEETTTEEEEECTTC-------------------BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEcCCCEEEEEcCCC-------------------CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 8877788999999986 5555566556567899999999985556666678999999763
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=2.9e-16 Score=136.48 Aligned_cols=236 Identities=8% Similarity=-0.022 Sum_probs=147.6
Q ss_pred ceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccc-eeEEEecCCCCCcEEEEecCCcE
Q 018697 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGK-INCVLWWSSGRHDKLVSIDEENI 145 (351)
Q Consensus 67 ~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~d~~v 145 (351)
.+..++|+|+|+.|+.+... +.+..|.+|++. ..+.. .+..+... ...+.|+|+++. ++..+.++.|
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~-~g~~~l~~~d~~---------~~~~~-~l~~~~~~~~~~~~~spdg~~-l~~~~~~~~l 104 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDF-DGNRNYYLLNLE---------TQQAV-QLTEGKGDNTFGGFISTDERA-FFYVKNELNL 104 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECT-TSSCEEEEEETT---------TTEEE-ECCCSSCBCTTTCEECTTSSE-EEEEETTTEE
T ss_pred eeecCcCCCCCCEEEEEEec-CCCceEEEEECC---------CCcEE-EeecCCCCccccceECCCCCE-EEEEEcCCcE
Confidence 47889999999998876411 123467777876 33333 23333333 334789999995 5555667789
Q ss_pred EEEEcCCCCCCcccccccccCcccceee-------------------eEECCCCCcEEEe-----ecCCeEEEEEcccCC
Q 018697 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSG-------------------GAWDPHDVNAVAA-----TCESSVQFWDLRSMG 201 (351)
Q Consensus 146 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~ 201 (351)
++||+.++... .+.... .+ .... ..|+|+++.++.. ..+..|++||+.+++
T Consensus 105 ~~~d~~~~~~~-~~~~~~-~~---~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 105 MKVDLETLEEQ-VIYTVD-EE---WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp EEEETTTCCEE-EEEECC-TT---EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred EEEECCCCCcE-EEEecc-cc---cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 99999865422 221111 01 1111 4678888877654 356789999998876
Q ss_pred cCceeecce-eEEEEcCC-CCCcEEEEecCC------CeEEEEecccCCcceeEeeCC--CCceeEEEecCCCCCeEEEe
Q 018697 202 KTNSIEHAH-VRNVDYDT-KKKHLLVTAADE------SGIHLWDLRMLKAPIQELPGH--THWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 202 ~~~~~~~~~-v~~~~~~~-~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~ 271 (351)
......... +..+.|+| ++. .++..+.+ ..|.+||+.. .. ...+..+ ...+..+.|+|+| .+|+..
T Consensus 180 ~~~~~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg-~~l~~~ 255 (396)
T 3c5m_A 180 LEVIHQDTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFWIPDG-SAMAYV 255 (396)
T ss_dssp EEEEEEESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEECTTS-SCEEEE
T ss_pred EEeeccCCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEECCCC-CEEEEE
Confidence 544443233 88999999 776 34443333 4688888864 32 3333333 2357889999999 666655
Q ss_pred eCC-----CeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCC-CCCceEEEee-----------
Q 018697 272 GTD-----STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS-REPWIFASLS----------- 334 (351)
Q Consensus 272 ~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~----------- 334 (351)
+.+ +.|.+||+.. ++...... ... .. +.|+| +|+ +++.++
T Consensus 256 ~~~~~~~~~~l~~~d~~~-------------------g~~~~l~~-~~~-~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 256 SYFKGQTDRVIYKANPET-------------------LENEEVMV-MPP-CS-HLMSNFDGS-LMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEETTTCCEEEEEECTTT-------------------CCEEEEEE-CCS-EE-EEEECSSSS-EEEEEECCC--------
T ss_pred ecCCCCccceEEEEECCC-------------------CCeEEeee-CCC-CC-CCccCCCCc-eEEEecCCcceeecccc
Confidence 443 4599999986 43322111 111 22 88999 998 666543
Q ss_pred -----eCCeEEEeecCc
Q 018697 335 -----YDGRVVVESVKP 346 (351)
Q Consensus 335 -----~dg~v~vw~~~~ 346 (351)
.+..|++||+..
T Consensus 313 ~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKA 329 (396)
T ss_dssp --CCCCCCEEEEEETTT
T ss_pred ccccCCCCcEEEEeccc
Confidence 347899999864
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=5.8e-15 Score=125.03 Aligned_cols=238 Identities=9% Similarity=0.013 Sum_probs=162.3
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v 145 (351)
.....+.+. +..+.++. ..++.|.+||.. +.+.+.++. .......+++++++. ++++...++.|
T Consensus 44 ~~~~~i~~~--~~~lyv~~---~~~~~v~viD~~---------t~~~~~~i~-~~~~p~~i~~~~~g~-lyv~~~~~~~v 107 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVV---NNSHVIFAIDIN---------TFKEVGRIT-GFTSPRYIHFLSDEK-AYVTQIWDYRI 107 (328)
T ss_dssp SCEEEEEEE--TTEEEEEE---GGGTEEEEEETT---------TCCEEEEEE-CCSSEEEEEEEETTE-EEEEEBSCSEE
T ss_pred ccceEEEEE--CCEEEEEE---cCCCEEEEEECc---------ccEEEEEcC-CCCCCcEEEEeCCCe-EEEEECCCCeE
Confidence 345677774 44555542 567899999988 667777774 346688999999884 34444478999
Q ss_pred EEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee--cCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCc
Q 018697 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKH 222 (351)
Q Consensus 146 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~ 222 (351)
.+||+.+......+......+.......+++ ++..++++. .++.|.++|+.+++....+..+. +..++++|+|+
T Consensus 108 ~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~- 184 (328)
T 3dsm_A 108 FIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK- 184 (328)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-
T ss_pred EEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-
Confidence 9999986543322221111111124556777 455566655 48899999999988777776544 78899999998
Q ss_pred EEEEecCC----------CeEEEEecccCCcceeEeeCC-CCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCC
Q 018697 223 LLVTAADE----------SGIHLWDLRMLKAPIQELPGH-THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELP 291 (351)
Q Consensus 223 ~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 291 (351)
+++++..+ +.|.++|..+ .+....+... ......++|+|++ ..|+.+.. .|.+||..+
T Consensus 185 l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~-~~lyv~~~--~v~~~d~~t------- 253 (328)
T 3dsm_A 185 MWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTR-DTLYWINN--DIWRMPVEA------- 253 (328)
T ss_dssp EEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTS-CEEEEESS--SEEEEETTC-------
T ss_pred EEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCC-CEEEEEcc--EEEEEECCC-------
Confidence 66666554 7899999886 5555555432 2467899999998 66666554 899999987
Q ss_pred CcccccCCcccccccce--eeccccceEEEEEeCCCCCceEEEe----eeCCeEEEeecC
Q 018697 292 SESLVESPNQRANSLLN--SYSDYEDSVYGLAWSSREPWIFASL----SYDGRVVVESVK 345 (351)
Q Consensus 292 ~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~----~~dg~v~vw~~~ 345 (351)
++... .+..+.....+++++|++..++++. ..++.|.+|+..
T Consensus 254 ------------~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 254 ------------DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ------------SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ------------CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 33221 1111235678999999555477777 678999999986
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=5.2e-15 Score=125.66 Aligned_cols=235 Identities=9% Similarity=0.043 Sum_probs=159.8
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCc
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~ 144 (351)
...|.+++|+++...++.. ..++.++.|.- .....+..+...+.+++|++++. +++++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~ 67 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPI----ISESELQTITA------------EPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGN 67 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCC----CCGGGSCEEEC------------EEEEEEESSCCCEEEEEECTTSC-EEEEETTTCE
T ss_pred ccccceeeecCCccceeEE----eecccCccccc------------ceeEEEeccCccccCcEECCCCC-EEEEECCCCE
Confidence 3467889999988777664 57888999932 33455666667789999999998 4455567889
Q ss_pred EEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC----CeEEEEEcccCCcCceee---cce-eEEEEc
Q 018697 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE----SSVQFWDLRSMGKTNSIE---HAH-VRNVDY 216 (351)
Q Consensus 145 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~---~~~-v~~~~~ 216 (351)
|.+||..++... .... .+...+.+++++|+++.+++...+ +.|.+||..++.....+. ... +..+++
T Consensus 68 i~~~d~~~~~~~-~~~~----~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 142 (333)
T 2dg1_A 68 IFKINPETKEIK-RPFV----SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVF 142 (333)
T ss_dssp EEEECTTTCCEE-EEEE----CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEE
T ss_pred EEEEeCCCCcEE-EEee----CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEE
Confidence 999998864322 2111 123478999999999866666555 689999988765432222 122 899999
Q ss_pred CCCCCcEEEEecC------CCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCC-eEEEeeCCCeEEEEEcCCCCCCC
Q 018697 217 DTKKKHLLVTAAD------ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLWLVSTSNHDE 289 (351)
Q Consensus 217 ~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~ 289 (351)
+|++. ++++... .+.|..+|... + .+..+..+...+..++|+|++ . ++++.+.++.|.+||....
T Consensus 143 d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~~i~~~d~~~~---- 214 (333)
T 2dg1_A 143 DSKGG-FYFTDFRGYSTNPLGGVYYVSPDF-R-TVTPIIQNISVANGIALSTDE-KVLWVTETTANRLHRIALEDD---- 214 (333)
T ss_dssp CTTSC-EEEEECCCBTTBCCEEEEEECTTS-C-CEEEEEEEESSEEEEEECTTS-SEEEEEEGGGTEEEEEEECTT----
T ss_pred CCCCC-EEEEeccccccCCCceEEEEeCCC-C-EEEEeecCCCcccceEECCCC-CEEEEEeCCCCeEEEEEecCC----
Confidence 99997 6665543 35566666543 2 233333334457899999999 6 4455566889999999641
Q ss_pred CCCcccccCCcccccccc--------eeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 290 LPSESLVESPNQRANSLL--------NSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+..+ ..+.++ ..+..++++++|. ++++...++.|.+|+.+
T Consensus 215 --------------g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 215 --------------GVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp --------------SSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTT
T ss_pred --------------CcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCC
Confidence 1111 112222 3578899999998 77777778899999874
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.69 E-value=3e-14 Score=133.93 Aligned_cols=249 Identities=13% Similarity=0.050 Sum_probs=156.5
Q ss_pred CCcceeeeeeCCCCCceEEEEeecCCc-ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecC
Q 018697 64 HPNEIWDLSSCPFDQRIFSTVFSTGES-YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE 142 (351)
Q Consensus 64 h~~~v~~i~~~~~~~~l~~~~~~~~~d-~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d 142 (351)
|...+..++|||||+.|+.+...+|.+ ..|++||+. .++.+.. ..+...+..++|+|| +. ++.++.+
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~---------tg~~~~~-~~~~~~~~~~~wspD-~~-l~~~~~~ 228 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVA---------DGKPLAD-ELKWVKFSGLAWLGN-DA-LLYSRFA 228 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETT---------TCCEEEE-EEEEEESCCCEESTT-SE-EEEEECC
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECC---------CCCCCCc-cCCCceeccEEEECC-CE-EEEEEec
Confidence 445788999999999998875443333 579999998 3343322 122223467899999 75 4444433
Q ss_pred C--------------cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC-----CeEEEEEcccC--C
Q 018697 143 E--------------NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSM--G 201 (351)
Q Consensus 143 ~--------------~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~--~ 201 (351)
+ .|++|++.++.....+.. ....+...+.++.|+|||++|+..+.+ ..|++||+.++ +
T Consensus 229 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~-~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 307 (741)
T 1yr2_A 229 EPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF-ATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG 307 (741)
T ss_dssp CC--------CCCCCEEEEEETTSCGGGCEEEE-CCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC
T ss_pred CcccccccccCCCCCEEEEEECCCCchhCEEEe-ccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc
Confidence 3 388999876542222221 112222347889999999998887754 38999999876 3
Q ss_pred cCceeecce--eEEEEcCCCCCcEEEEecC---CCeEEEEecccC-CcceeEeeCCCCceeEEEecCCCCCeEEEeeCCC
Q 018697 202 KTNSIEHAH--VRNVDYDTKKKHLLVTAAD---ESGIHLWDLRML-KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS 275 (351)
Q Consensus 202 ~~~~~~~~~--v~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 275 (351)
....+.... ..... +|+++.+++.... ++.|.+||+... ......+..+...+..+.|+ ++ .++++...|+
T Consensus 308 ~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~-~lv~~~~~dg 384 (741)
T 1yr2_A 308 PVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GN-RLFASYIHDA 384 (741)
T ss_dssp CCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BT-EEEEEEEETT
T ss_pred ccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CC-EEEEEEEECC
Confidence 134443222 33333 3888844444332 456999998753 12233334444556677777 44 7888899999
Q ss_pred eEEEEEcCCCCCCCCCCcccccCCcccccccceeecc-ccceEEEEEeCCCCCceEEEee---eCCeEEEeecCc
Q 018697 276 TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD-YEDSVYGLAWSSREPWIFASLS---YDGRVVVESVKP 346 (351)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~---~dg~v~vw~~~~ 346 (351)
..+||.+... +.....+.. +...+..++++|+++.++++.+ ..+.|++||+.+
T Consensus 385 ~~~l~~~~~~------------------g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 385 KSQVLAFDLD------------------GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEEEEETT------------------SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEEEeCC------------------CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 8888866530 334444443 3567889999999874544443 457899999864
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=6.4e-13 Score=110.68 Aligned_cols=275 Identities=9% Similarity=-0.016 Sum_probs=174.5
Q ss_pred eEeeeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEE
Q 018697 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIW 96 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw 96 (351)
..+..+..++++. +.+++ ..++.+..++.. +.+.......+...+.++++.+++..+++. ..++.|..|
T Consensus 15 ~~~~~i~~d~~g~-l~v~~---~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~----~~~~~i~~~ 83 (299)
T 2z2n_A 15 TGPYGITVSDKGK-VWITQ---HKANMISCINLD---GKITEYPLPTPDAKVMCLTISSDGEVWFTE----NAANKIGRI 83 (299)
T ss_dssp CCEEEEEECTTSC-EEEEE---TTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSCEEEEE----TTTTEEEEE
T ss_pred CCccceEECCCCC-EEEEe---cCCCcEEEEcCC---CCeEEecCCcccCceeeEEECCCCCEEEeC----CCCCeEEEE
Confidence 3455566666654 44443 234666665544 223222223345789999999988766664 456788888
Q ss_pred EcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEE
Q 018697 97 QIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW 176 (351)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 176 (351)
+... ... ...+......+.++++.+++. ++++...++.|.+||. ++. ...... ......+.++++
T Consensus 84 ~~~g--------~~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~-~~~~~~---~~~~~~~~~i~~ 148 (299)
T 2z2n_A 84 TKKG--------IIK-EYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGK-IREYEL---PNKGSYPSFITL 148 (299)
T ss_dssp CTTS--------CEE-EEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCC-EEEEEC---SSTTCCEEEEEE
T ss_pred CCCC--------cEE-EEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCC-EEEecC---CCCCCCCceEEE
Confidence 8651 111 111222455788999999887 3444456789999998 332 221111 112236889999
Q ss_pred CCCCCcEEEeecCCeEEEEEcccCCcCce-eec-ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe--eCC
Q 018697 177 DPHDVNAVAATCESSVQFWDLRSMGKTNS-IEH-AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL--PGH 251 (351)
Q Consensus 177 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~-~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~ 251 (351)
.+++..+++...++.|..||. +++.... ... .. +..+++++++. ++++...++.|.+||. + +. +..+ ..+
T Consensus 149 ~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~-g~-~~~~~~~~~ 223 (299)
T 2z2n_A 149 GSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-S-GE-ITEFKIPTP 223 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-T-CC-EEEEECSST
T ss_pred cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-C-Cc-EEEEECCCC
Confidence 999876666656789999998 5544322 111 12 88999999997 7776767889999998 4 33 2223 334
Q ss_pred CCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccc-eeeccccceEEEEEeCCCCCceE
Q 018697 252 THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL-NSYSDYEDSVYGLAWSSREPWIF 330 (351)
Q Consensus 252 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l 330 (351)
...+.+++++++| .++++...++.|..||.. +... ..+..+...+.++++ +++. ++
T Consensus 224 ~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~~--------------------g~~~~~~~~~~~~~~~~i~~-~~g~-l~ 280 (299)
T 2z2n_A 224 NARPHAITAGAGI-DLWFTEWGANKIGRLTSN--------------------NIIEEYPIQIKSAEPHGICF-DGET-IW 280 (299)
T ss_dssp TCCEEEEEECSTT-CEEEEETTTTEEEEEETT--------------------TEEEEEECSSSSCCEEEEEE-CSSC-EE
T ss_pred CCCceeEEECCCC-CEEEeccCCceEEEECCC--------------------CceEEEeCCCCCCccceEEe-cCCC-EE
Confidence 5678999999999 777766678899999983 2211 112334456899999 8887 66
Q ss_pred EEeeeCCeEEEeecCc
Q 018697 331 ASLSYDGRVVVESVKP 346 (351)
Q Consensus 331 ~s~~~dg~v~vw~~~~ 346 (351)
++.. .+.|..++.++
T Consensus 281 v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 281 FAME-CDKIGKLTLIK 295 (299)
T ss_dssp EEET-TTEEEEEEEC-
T ss_pred EEec-CCcEEEEEcCc
Confidence 6554 56677777654
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=1.4e-14 Score=122.72 Aligned_cols=222 Identities=13% Similarity=0.047 Sum_probs=148.8
Q ss_pred EEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee------
Q 018697 43 EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL------ 116 (351)
Q Consensus 43 ~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~------ 116 (351)
.|.+++ ...+.+....-.++-..+..++++|+++.+++ ...++.|++|+... ....+..+
T Consensus 70 ~i~~~d--~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~----d~~~~~v~~~~~~g--------~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 70 TILVID--PNNAEILQSSGKNLFYLPHGLSIDTDGNYWVT----DVALHQVFKLDPHS--------KEGPLLILGRSMQP 135 (329)
T ss_dssp CEEEEC--TTTCCEEEEECTTTCSSEEEEEECTTSCEEEE----ETTTTEEEEECTTC--------SSCCSEEESBTTBC
T ss_pred cEEEEE--CCCCeEEeccCCCccCCceEEEECCCCCEEEE----ECCCCEEEEEeCCC--------CeEEEEEecccCCC
Confidence 455444 43344432222244467899999999985554 36778999999762 11133343
Q ss_pred ---eccccceeEEEecC-CCCCcEEEEe-cCCcEEEEEcCCCCCCcccccccc-----cCcccceeeeEECCC-CCcEEE
Q 018697 117 ---DAHVGKINCVLWWS-SGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS-----SGMLHYLSGGAWDPH-DVNAVA 185 (351)
Q Consensus 117 ---~~h~~~v~~~~~~~-~~~~~~~~~~-~d~~v~iwd~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l~~ 185 (351)
..+-.....++++| ++. ++++.+ .++.|++|+.. +........... .++.....+++++|+ +..+++
T Consensus 136 g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 136 GSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp CCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred CCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 23445688999999 565 455555 58999999954 222221111100 122335889999998 555555
Q ss_pred eecCCeEEEEEcccCCcCceeecc---e-eEEEEcCCCCCcEEEE-------ecCCCeEEEEecccCCcceeEee---CC
Q 018697 186 ATCESSVQFWDLRSMGKTNSIEHA---H-VRNVDYDTKKKHLLVT-------AADESGIHLWDLRMLKAPIQELP---GH 251 (351)
Q Consensus 186 ~~~d~~i~iwd~~~~~~~~~~~~~---~-v~~~~~~~~~~~~l~~-------~~~dg~i~i~d~~~~~~~~~~~~---~~ 251 (351)
...++.|++||..+++.+..+... . +..++++| +. ++++ ...+..|++||..+ ++.+..+. .+
T Consensus 214 d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~-~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~ 290 (329)
T 3fvz_A 214 DRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF-LFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKH 290 (329)
T ss_dssp ETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE-EEEEECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSSC
T ss_pred ECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE-EEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCCc
Confidence 567899999999988777766422 2 88999999 32 3333 33455899999887 66677663 56
Q ss_pred CCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 252 THWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 252 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
...+..|+++|+| .++++...++.|++|++..
T Consensus 291 ~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 291 FDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred cCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 6778999999999 8999999999999999864
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.67 E-value=2.9e-14 Score=118.29 Aligned_cols=200 Identities=12% Similarity=0.124 Sum_probs=142.3
Q ss_pred ccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccc-ccccCcccceeeeEE-CCCCCcEEEeec-CCeEEE
Q 018697 118 AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS-KQSSGMLHYLSGGAW-DPHDVNAVAATC-ESSVQF 194 (351)
Q Consensus 118 ~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~~v~~~~~-~~~~~~l~~~~~-d~~i~i 194 (351)
++-..+.++++++++. ++++...++.|.+||... ........ ....++...+.++++ .+++..+++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCC-EEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3446788999999987 455557789999999872 22221111 011233446889999 466655555433 889999
Q ss_pred EEcccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee--CCCCceeEEEecCCCCCeEE
Q 018697 195 WDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP--GHTHWTWAVCCNPEYDGFIL 269 (351)
Q Consensus 195 wd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~ 269 (351)
|| .+++.+..+...+ +..++++|++. ++++...++.|.+||.. ++.+..+. .+...+..++++|+| .+++
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g-~l~v 179 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQ-EIFI 179 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSS-EEEE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCC-CEEE
Confidence 99 5566555554322 89999999997 78888888999999965 44555554 344568999999999 7888
Q ss_pred EeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccc--cceEEEEEeCCCCCceEEEeeeCC-eEEEeecC
Q 018697 270 SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY--EDSVYGLAWSSREPWIFASLSYDG-RVVVESVK 345 (351)
Q Consensus 270 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg-~v~vw~~~ 345 (351)
+...++.|++||.. ++.+..+..+ ...+.+++++++|. ++++...++ .|.+|+..
T Consensus 180 ~~~~~~~i~~~~~~--------------------g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 180 SDNRAHCVKVFNYE--------------------GQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEGGGTEEEEEETT--------------------CCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTT
T ss_pred EECCCCEEEEEcCC--------------------CCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCC
Confidence 88889999999975 3444445332 35688999999998 788877776 99999965
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.66 E-value=7.8e-13 Score=110.16 Aligned_cols=239 Identities=5% Similarity=-0.075 Sum_probs=161.9
Q ss_pred ecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEec
Q 018697 62 FSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141 (351)
Q Consensus 62 ~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 141 (351)
..+...+.++++.+++..+++. ..++.|.+|+... ... ...+..+...+.++++.+++. ++++...
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~----~~~~~v~~~d~~~--------~~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~ 76 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQ----HKANMISCINLDG--------KIT-EYPLPTPDAKVMCLTISSDGE-VWFTENA 76 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEE----TTTTEEEEECTTC--------CEE-EEECSSTTCCEEEEEECTTSC-EEEEETT
T ss_pred CCcCCCccceEECCCCCEEEEe----cCCCcEEEEcCCC--------CeE-EecCCcccCceeeEEECCCCC-EEEeCCC
Confidence 3455789999999998766664 4567899998651 111 111223456789999999988 3444455
Q ss_pred CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeec--ce-eEEEEcCC
Q 018697 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH--AH-VRNVDYDT 218 (351)
Q Consensus 142 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~-v~~~~~~~ 218 (351)
++.|..|+... ....... ......+.++++.+++..+++...++.|..||. +++....... .. +..+++++
T Consensus 77 ~~~i~~~~~~g--~~~~~~~---~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~ 150 (299)
T 2z2n_A 77 ANKIGRITKKG--IIKEYTL---PNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS 150 (299)
T ss_dssp TTEEEEECTTS--CEEEEEC---SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT
T ss_pred CCeEEEECCCC--cEEEEeC---CCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC
Confidence 78899999762 2211111 112336889999998876666667889999998 4443222111 12 89999999
Q ss_pred CCCcEEEEecCCCeEEEEecccCCcceeE-eeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCccccc
Q 018697 219 KKKHLLVTAADESGIHLWDLRMLKAPIQE-LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297 (351)
Q Consensus 219 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 297 (351)
++. ++++...++.|..||. + ++.... +......+..++++++| .++++...++.|.+||. .
T Consensus 151 ~g~-l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~------------- 212 (299)
T 2z2n_A 151 DNA-LWFTENQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-S------------- 212 (299)
T ss_dssp TSC-EEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-T-------------
T ss_pred CCC-EEEEeCCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-C-------------
Confidence 997 7777777789999998 4 433221 23344568899999998 77777767889999998 5
Q ss_pred CCcccccccce-eeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 298 SPNQRANSLLN-SYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 298 ~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+.... ....+...+.+++++++|. ++++...++.|..|+..
T Consensus 213 ------g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 213 ------GEITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSN 254 (299)
T ss_dssp ------CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETT
T ss_pred ------CcEEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCC
Confidence 33221 1223445688999999988 77776677889999864
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.66 E-value=1.1e-13 Score=115.55 Aligned_cols=233 Identities=9% Similarity=0.041 Sum_probs=154.6
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v 145 (351)
.-.....|+|++..|+.+ ...++.|..|+.. .... ..+ .....+.+++++++++ ++++. +..|
T Consensus 13 ~~~Egp~w~~~~~~l~~~---d~~~~~i~~~d~~---------~~~~-~~~-~~~~~~~~i~~~~dG~--l~v~~-~~~l 75 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFV---DIPAKKVCRWDSF---------TKQV-QRV-TMDAPVSSVALRQSGG--YVATI-GTKF 75 (297)
T ss_dssp SBEEEEEEETTTTEEEEE---ETTTTEEEEEETT---------TCCE-EEE-ECSSCEEEEEEBTTSS--EEEEE-TTEE
T ss_pred ccccCCeEECCCCEEEEE---ECCCCEEEEEECC---------CCcE-EEE-eCCCceEEEEECCCCC--EEEEE-CCeE
Confidence 344578899977777665 3667899999976 2222 223 3456789999999999 45544 5689
Q ss_pred EEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC---------CeEEEEEcccCCcCceeecc-e-eEEE
Q 018697 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE---------SSVQFWDLRSMGKTNSIEHA-H-VRNV 214 (351)
Q Consensus 146 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~-~-v~~~ 214 (351)
.+||..++.. ..+...........+++++++|+++.+++.... ..-.+|.+........+... . .+.+
T Consensus 76 ~~~d~~~g~~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi 154 (297)
T 3g4e_A 76 CALNWKEQSA-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGL 154 (297)
T ss_dssp EEEETTTTEE-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEE
T ss_pred EEEECCCCcE-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccce
Confidence 9999875432 111111111112358899999999865554321 23345554432222222211 2 7899
Q ss_pred EcCCCCCcEEEEecCCCeEEEEecc-cCCcc-----eeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCC
Q 018697 215 DYDTKKKHLLVTAADESGIHLWDLR-MLKAP-----IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD 288 (351)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 288 (351)
+|+|+++.++++.+.++.|.+||+. ..+.. +..+..+......++++++| .+.++...++.|..||..+
T Consensus 155 ~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~t---- 229 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVT---- 229 (297)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTT----
T ss_pred EEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCC----
Confidence 9999998666777778999999974 21221 22222334567899999999 8888877788999999987
Q ss_pred CCCCcccccCCcccccccceeeccccceEEEEEeC-CCCCceEEEeeeC
Q 018697 289 ELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS-SREPWIFASLSYD 336 (351)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~d 336 (351)
++.+..+..+...+++++|. |+++.++++...+
T Consensus 230 ---------------G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 230 ---------------GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ---------------CCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred ---------------ceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 78887887776679999998 8887566666543
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=3.3e-14 Score=121.35 Aligned_cols=224 Identities=10% Similarity=0.105 Sum_probs=143.8
Q ss_pred cceeeeeeCCCCCceEEEEeec-----CCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEe
Q 018697 66 NEIWDLSSCPFDQRIFSTVFST-----GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI 140 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~-----~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 140 (351)
..+..+++ +|+.++.+.... ..++.|.+|++. ..+. ..+ ..+..++|+|+|+.+++++.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~---------~~~~-~~l----~~~~~~~~SpDg~~la~~~~ 78 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLK---------NNAR-RFI----ENATMPRISPDGKKIAFMRA 78 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETT---------TCCE-EEE----ESCEEEEECTTSSEEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCC---------CCce-EEc----ccCCCeEECCCCCEEEEEEe
Confidence 45666777 788877653211 125678889887 2222 223 46788999999996444443
Q ss_pred cC--C--cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC---------------------------
Q 018697 141 DE--E--NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE--------------------------- 189 (351)
Q Consensus 141 ~d--~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------------------- 189 (351)
.+ + .|.+|++.++. ...+... .. +..++|+|+++.|+.++.+
T Consensus 79 ~~~~~~~~l~~~~~~~g~-~~~l~~~-----~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 151 (347)
T 2gop_A 79 NEEKKVSEIWVADLETLS-SKKILEA-----KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEK 151 (347)
T ss_dssp ETTTTEEEEEEEETTTTE-EEEEEEE-----SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CE
T ss_pred ccCCCcceEEEEECCCCc-eEEEEcC-----CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCcc
Confidence 32 3 37777877532 2222211 12 8899999999998887642
Q ss_pred CeEEEEEcccCCcCceeecceeEEEEcCCCCCcEEEEecCC------C-eEEEEecccCCcceeEeeCCCCceeEEEecC
Q 018697 190 SSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADE------S-GIHLWDLRMLKAPIQELPGHTHWTWAVCCNP 262 (351)
Q Consensus 190 ~~i~iwd~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 262 (351)
..|++||+.+++.+..+....+..++|+|++ +++++..+ . ...+|.+.. ++ ...+..+ ..+..+ +|
T Consensus 152 ~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l~~~-~~~~~~--sp 224 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEKPRFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWED-GK-EEKMFEK-VSFYAV--DS 224 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEETTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEET-TE-EEEEEEE-ESEEEE--EE
T ss_pred ceEEEEECCCCeEEeeecCCCcccccCCCCe--EEEEEecccccccccccccEEEeCC-Cc-eEEeccC-cceeeE--CC
Confidence 5789999988765233332147788999999 56656543 2 345555442 43 4444444 455544 99
Q ss_pred CCCCeEEEeeCC--------CeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEE-EEeCCCCCceEEEe
Q 018697 263 EYDGFILSAGTD--------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG-LAWSSREPWIFASL 333 (351)
Q Consensus 263 ~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~ 333 (351)
+| .+|+.++.+ ..|.+|| . ++.......+...+.. +.|+ ++ +++++
T Consensus 225 dg-~~l~~~~~~~~~~~~~~~~l~~~d--~-------------------~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~ 279 (347)
T 2gop_A 225 DG-ERILLYGKPEKKYMSEHNKLYIYD--G-------------------KEVMGILDEVDRGVGQAKIKD-GK--VYFTL 279 (347)
T ss_dssp CS-SCEEEEECCSSSCCCSSCEEEEEC--S-------------------SCEEESSTTCCSEEEEEEEET-TE--EEEEE
T ss_pred CC-CEEEEEEccccCCccccceEEEEC--C-------------------CceEeccccCCcccCCccEEc-Cc--EEEEE
Confidence 99 777666543 3688888 4 4444444556667886 9999 76 78899
Q ss_pred eeCCeEEEeecC
Q 018697 334 SYDGRVVVESVK 345 (351)
Q Consensus 334 ~~dg~v~vw~~~ 345 (351)
+.++.++|| +.
T Consensus 280 ~~~~~~~l~-~~ 290 (347)
T 2gop_A 280 FEEGSVNLY-IW 290 (347)
T ss_dssp EETTEEEEE-EE
T ss_pred ecCCcEEEE-Ec
Confidence 999999999 75
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.66 E-value=3.2e-13 Score=121.90 Aligned_cols=292 Identities=11% Similarity=0.069 Sum_probs=191.8
Q ss_pred eecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeC----CCCCceEEEEeecCCcceEEEE
Q 018697 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSC----PFDQRIFSTVFSTGESYGAAIW 96 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~----~~~~~l~~~~~~~~~d~~i~vw 96 (351)
.+.+++++..++++. .++.+.+++++....... ..+.. ......++|+ |++++++++. ..++.|.|+
T Consensus 201 ~v~~SpDGr~lyv~~----~dg~V~viD~~~~t~~~v-~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n---~~~~~v~Vi 271 (567)
T 1qks_A 201 ISRLSASGRYLFVIG----RDGKVNMIDLWMKEPTTV-AEIKI-GSEARSIETSKMEGWEDKYAIAGA---YWPPQYVIM 271 (567)
T ss_dssp EEEECTTSCEEEEEE----TTSEEEEEETTSSSCCEE-EEEEC-CSEEEEEEECCSTTCTTTEEEEEE---EETTEEEEE
T ss_pred ceEECCCCCEEEEEc----CCCeEEEEECCCCCCcEe-EEEec-CCCCceeEEccccCCCCCEEEEEE---ccCCeEEEE
Confidence 456778888877764 478899999873333333 33333 3346799999 6999998874 456899999
Q ss_pred EcccccCCCCCCcceeeeeeec----------ccc-ceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccccc
Q 018697 97 QIPELYGQLNSPQLERIAALDA----------HVG-KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (351)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~----------h~~-~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 165 (351)
|.. +++.+..+.. |.. .+..+..++++...++....+|.|.++|........ +....
T Consensus 272 D~~---------t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~-v~~i~-- 339 (567)
T 1qks_A 272 DGE---------TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK-TTEIS-- 339 (567)
T ss_dssp ETT---------TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE-EEEEE--
T ss_pred ECC---------CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce-eeeee--
Confidence 977 5566655432 222 677888899887534444667999999987532111 11111
Q ss_pred CcccceeeeEECCCCCcEEEee-cCCeEEEEEcccCCcCceeec-c---e-eEEEE-cCCCCCcEEEEec-CCCeEEEEe
Q 018697 166 GMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEH-A---H-VRNVD-YDTKKKHLLVTAA-DESGIHLWD 237 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~---~-v~~~~-~~~~~~~~l~~~~-~dg~i~i~d 237 (351)
......++.|+|++++++++. .++.|.++|+.+++....+.. + | -.... ++|++..+++++. .++.|.++|
T Consensus 340 -~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid 418 (567)
T 1qks_A 340 -AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIG 418 (567)
T ss_dssp -CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEE
T ss_pred -ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEec
Confidence 112466789999999988776 578999999999887666654 2 2 11222 5787554566554 568999999
Q ss_pred cccC------CcceeEeeCCCCceeEEEecCCCCCeEEEeeC-------CCeEEEEEcCCCCCCCCCCcccccCCccccc
Q 018697 238 LRML------KAPIQELPGHTHWTWAVCCNPEYDGFILSAGT-------DSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (351)
Q Consensus 238 ~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
.... .+.++++......-..+..+|++ +++..... ..+|.++|+.+....- ..
T Consensus 419 ~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~-~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g-------------~~ 484 (567)
T 1qks_A 419 TDPEGHPDNAWKILDSFPALGGGSLFIKTHPNS-QYLYVDATLNPEAEISGSVAVFDIKAMTGDG-------------SD 484 (567)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC-SEEEEECTTCSSHHHHTCEEEEEGGGCCCSS-------------SC
T ss_pred CCCCCCccccCEEEEEEecCCCCCEEEEeCCCC-CeEEEecCCCCCcccCceEEEEECCcccccc-------------cC
Confidence 8752 23566666544444567899999 67766552 3589999998720000 00
Q ss_pred ccceeec--------cccceEEEEEeCCCCCceEEEee----eCCeEEEeecCccc
Q 018697 305 SLLNSYS--------DYEDSVYGLAWSSREPWIFASLS----YDGRVVVESVKPFL 348 (351)
Q Consensus 305 ~~~~~~~--------~~~~~v~~~~~~~~~~~~l~s~~----~dg~v~vw~~~~~~ 348 (351)
.....+. .....+..+.|+|+|..++++.. .++.|.|+|..+..
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 485 PEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp CCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 1111221 12346889999999997777754 37999999987654
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=4.7e-13 Score=120.80 Aligned_cols=220 Identities=13% Similarity=0.068 Sum_probs=154.7
Q ss_pred cCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcC--CCCCCcccccccc
Q 018697 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLD--CSNKNAQVQSKQS 164 (351)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~--~~~~~~~~~~~~~ 164 (351)
...++.|.++|.. +.+.+.++... ..+..+.|+|++++ +++++.|+.|.+||+. +......+..
T Consensus 173 ~~~~~~V~viD~~---------t~~v~~~i~~g-~~p~~v~~SpDGr~-lyv~~~dg~V~viD~~~~t~~~v~~i~~--- 238 (567)
T 1qks_A 173 LRDAGQIALIDGS---------TYEIKTVLDTG-YAVHISRLSASGRY-LFVIGRDGKVNMIDLWMKEPTTVAEIKI--- 238 (567)
T ss_dssp ETTTTEEEEEETT---------TCCEEEEEECS-SCEEEEEECTTSCE-EEEEETTSEEEEEETTSSSCCEEEEEEC---
T ss_pred eCCCCeEEEEECC---------CCeEEEEEeCC-CCccceEECCCCCE-EEEEcCCCeEEEEECCCCCCcEeEEEec---
Confidence 3678999999988 66777777543 35668999999996 5556778999999995 4332222221
Q ss_pred cCcccceeeeEEC----CCCCcEEEee-cCCeEEEEEcccCCcCceeecc-------------eeEEEEcCCCCCcEEEE
Q 018697 165 SGMLHYLSGGAWD----PHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA-------------HVRNVDYDTKKKHLLVT 226 (351)
Q Consensus 165 ~~~~~~v~~~~~~----~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~-------------~v~~~~~~~~~~~~l~~ 226 (351)
+ .....++|+ |++++++++. .++.|.++|..+.+.+..+... ++..+..+++++.+++.
T Consensus 239 -G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 239 -G--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp -C--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred -C--CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 1 146789999 6999988876 5699999999888877665421 26788889988867777
Q ss_pred ecCCCeEEEEecccCCcc-eeEeeCCCCceeEEEecCCCCCeEE-EeeCCCeEEEEEcCCCCCCCCCCcccccCCccccc
Q 018697 227 AADESGIHLWDLRMLKAP-IQELPGHTHWTWAVCCNPEYDGFIL-SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (351)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
..++|.|.++|....... +..+ ........+.|+|++ ++++ +...++.|.++|+.+ +
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdg-r~~~va~~~sn~V~ViD~~t-------------------~ 374 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSH-RYFITAANARNKLVVIDTKE-------------------G 374 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTS-CEEEEEEGGGTEEEEEETTT-------------------T
T ss_pred ecCCCeEEEEecCCCccceeeee-eccccccCceECCCC-CEEEEEeCCCCeEEEEECCC-------------------C
Confidence 778899999998763322 2222 234556788999999 6554 555688999999998 5
Q ss_pred ccceeecc-----ccceEEEEE-eCCCCCceEEEee-eCCeEEEeecCc
Q 018697 305 SLLNSYSD-----YEDSVYGLA-WSSREPWIFASLS-YDGRVVVESVKP 346 (351)
Q Consensus 305 ~~~~~~~~-----~~~~v~~~~-~~~~~~~~l~s~~-~dg~v~vw~~~~ 346 (351)
+.+..+.. |.. .... ++|++..++++.. .++.|.+++..+
T Consensus 375 kl~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPG--RGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEEEECSSSSBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred cEEEEEeccCcCCCCc--cceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 55544432 322 1222 5887554666654 568999999875
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=2.5e-13 Score=111.81 Aligned_cols=204 Identities=11% Similarity=-0.010 Sum_probs=152.7
Q ss_pred cCCcceEEEEEcccccCCCCCCcceeeeeeeccc-cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccccc
Q 018697 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (351)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 165 (351)
++.++.|.+||.+ +++.+-++..+. ..+.++.+.|+|+ +++ +.++.|..||. +++....+...
T Consensus 11 ~~~~~~v~~~d~~---------tG~~~w~~~~~~~~~~~~~~~~pdG~--ilv-s~~~~V~~~d~-~G~~~W~~~~~--- 74 (276)
T 3no2_A 11 GSGWNKIAIINKD---------TKEIVWEYPLEKGWECNSVAATKAGE--ILF-SYSKGAKMITR-DGRELWNIAAP--- 74 (276)
T ss_dssp CTTCSEEEEEETT---------TTEEEEEEECCTTCCCCEEEECTTSC--EEE-ECBSEEEEECT-TSCEEEEEECC---
T ss_pred eCCCCEEEEEECC---------CCeEEEEeCCCccCCCcCeEECCCCC--EEE-eCCCCEEEECC-CCCEEEEEcCC---
Confidence 5889999999987 678888887765 5789999999998 455 44678999998 55544443321
Q ss_pred CcccceeeeEECCCCCcEEEeec-CCeEEEEEcccCCcCceeec------ce--eEEEEcCCCCCcEEEEecCCCeEEEE
Q 018697 166 GMLHYLSGGAWDPHDVNAVAATC-ESSVQFWDLRSMGKTNSIEH------AH--VRNVDYDTKKKHLLVTAADESGIHLW 236 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~------~~--v~~~~~~~~~~~~l~~~~~dg~i~i~ 236 (351)
....+.++.+.++++.+++.+. ++.|..+|. +++.+..+.. .+ ...+++.++|. ++++...++.|..|
T Consensus 75 -~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 75 -AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREI 151 (276)
T ss_dssp -TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEE
T ss_pred -CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEE
Confidence 1226788899999999998877 778888876 5665555431 11 55667889998 78889999999999
Q ss_pred ecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecccc--
Q 018697 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE-- 314 (351)
Q Consensus 237 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 314 (351)
|.. ++.+.++... ..+.++...++| .+++++..++.|..+|..+ ++.+..+..+.
T Consensus 152 d~~--G~~~w~~~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~t-------------------G~~~w~~~~~~~~ 208 (276)
T 3no2_A 152 APN--GQLLNSVKLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLES-------------------NRIVRRVNANDIE 208 (276)
T ss_dssp CTT--SCEEEEEECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTT-------------------CCEEEEEEGGGSB
T ss_pred CCC--CCEEEEEECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcC-------------------CcEEEEecCCCCC
Confidence 986 6677777754 455677888998 8899888888999999998 77777765332
Q ss_pred ----ceEEEEEeCCCCCceEEEe
Q 018697 315 ----DSVYGLAWSSREPWIFASL 333 (351)
Q Consensus 315 ----~~v~~~~~~~~~~~~l~s~ 333 (351)
..+.++...++|. ++++.
T Consensus 209 ~~~l~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 209 GVQLFFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp SCCCSEEEEEEECTTSC-EEEEE
T ss_pred CccccccccceEcCCCC-EEEEe
Confidence 2377888888888 56555
No 194
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.63 E-value=1.9e-13 Score=128.01 Aligned_cols=236 Identities=8% Similarity=-0.001 Sum_probs=148.2
Q ss_pred CCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeee---e-eeccccceeEEEecCCCCCcEEEEecCC----cEE
Q 018697 75 PFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIA---A-LDAHVGKINCVLWWSSGRHDKLVSIDEE----NIF 146 (351)
Q Consensus 75 ~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~---~-~~~h~~~v~~~~~~~~~~~~~~~~~~d~----~v~ 146 (351)
|+|++++.....++.. .-.+|..... .+..+.+. . -.+|...+..++|||||+.++++...+| .|+
T Consensus 81 ~dG~~~~~~~~~~~~~-~~~l~~~~~~-----~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~ 154 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQN-QRVLYVQDSL-----EGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIK 154 (710)
T ss_dssp EETTEEEEEEECSSCS-SCEEEEESST-----TSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEE
T ss_pred EECCEEEEEEEcCCce-EEEEEEEcCC-----CCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEE
Confidence 8898888765332221 2245554421 01112111 1 1234456889999999996444444444 899
Q ss_pred EEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCe----------------EEEEEcccCCcC--ceeec
Q 018697 147 LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS----------------VQFWDLRSMGKT--NSIEH 208 (351)
Q Consensus 147 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~iwd~~~~~~~--~~~~~ 208 (351)
+||+.++......... ..+.+++|+||++.|+.++.++. |++|++.+++.. ..+..
T Consensus 155 v~d~~tg~~~~~~~~~------~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~ 228 (710)
T 2xdw_A 155 FMKVDGAKELPDVLER------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (710)
T ss_dssp EEETTTTEEEEEEEEE------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEECCCCCCCcccccC------cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc
Confidence 9999875433222211 13678999999999999887655 999999877633 22221
Q ss_pred -ce---eEEEEcCCCCCcEEEEecC----CCeEEEEeccc------CCcceeEeeCCCCceeEEEecCCCCCeEEEeeC-
Q 018697 209 -AH---VRNVDYDTKKKHLLVTAAD----ESGIHLWDLRM------LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGT- 273 (351)
Q Consensus 209 -~~---v~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~- 273 (351)
.+ +..+.|+|+|++++++... +..|++||+.. .......+..+...+.. .|+|+| ..|+..+.
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg-~~l~~~s~~ 306 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEG-TVFTFKTNR 306 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEET-TEEEEEECT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccC-CEEEEEECC
Confidence 12 7789999999954444431 56899999975 32246667666666655 488988 55544433
Q ss_pred C---CeEEEEEcCCCCCCCCCCcccccCCcccccc--cceeeccccc--eEEEEEeCCCCCceEEEeeeCCeE--EEeec
Q 018697 274 D---STVNLWLVSTSNHDELPSESLVESPNQRANS--LLNSYSDYED--SVYGLAWSSREPWIFASLSYDGRV--VVESV 344 (351)
Q Consensus 274 d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~v--~vw~~ 344 (351)
+ +.|.+||+.. +. ....+..|.. .+..++|++++. ++++...|+.. .+|++
T Consensus 307 ~~~~~~l~~~d~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 307 HSPNYRLINIDFTD-------------------PEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp TCTTCEEEEEETTS-------------------CCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEET
T ss_pred CCCCCEEEEEeCCC-------------------CCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEEC
Confidence 3 3699999876 32 2334444433 688899997665 88888889865 55565
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.61 E-value=1.2e-13 Score=115.26 Aligned_cols=202 Identities=9% Similarity=0.009 Sum_probs=140.2
Q ss_pred eeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCe
Q 018697 112 RIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS 191 (351)
Q Consensus 112 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 191 (351)
.+..+..+.....+++|+|+++.+++++..++.|..|+..++ . .... .+...+.+++++|+++.+++...++.
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~-~~~~----~~~~~~~~l~~~~dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L-SPEM----HPSHHQNGHCLNKQGHLIACSHGLRR 91 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E-EEEE----SSCSSEEEEEECTTCCEEEEETTTTE
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e-EEEE----CCCCCcceeeECCCCcEEEEecCCCe
Confidence 334455566677899999999865666677899999999864 2 2221 12346889999999987666666789
Q ss_pred EEEEEcccCCcCceeec--ce----eEEEEcCCCCCcEEEE----ec-------------CCCeEEEEecccCCcceeEe
Q 018697 192 VQFWDLRSMGKTNSIEH--AH----VRNVDYDTKKKHLLVT----AA-------------DESGIHLWDLRMLKAPIQEL 248 (351)
Q Consensus 192 i~iwd~~~~~~~~~~~~--~~----v~~~~~~~~~~~~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~ 248 (351)
|.+||..+++....... .. +..++++|+|+ ++++ |. ..+.|..++.. + .+..+
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g-~~~~~ 167 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--G-TLSAP 167 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--S-CEEEE
T ss_pred EEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC--C-CEEEe
Confidence 99999977764332211 11 67899999998 6776 33 13456555543 3 34555
Q ss_pred eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccccc---ceeeccccceEEEEEeCCC
Q 018697 249 PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL---LNSYSDYEDSVYGLAWSSR 325 (351)
Q Consensus 249 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~ 325 (351)
..+......++|+|++ .++++.+.++.|.+||+... +.. ...+..+...+.+++++++
T Consensus 168 ~~~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~~------------------g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLNAR------------------GETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp ECCCSSEEEEEECTTS-CEEEEETTTTEEEEEEECSS------------------SCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred ecCCCCCccEEECCCC-CEEEEeCCCCeEEEEEECCC------------------CcCcCCCeEeeCCCCCCCeEEECCC
Confidence 5666778999999999 77788888899999999730 222 1222234455678999999
Q ss_pred CCceEEEeeeCCeEEEeecCc
Q 018697 326 EPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 326 ~~~~l~s~~~dg~v~vw~~~~ 346 (351)
|. ++++. ++.|.+|+.+.
T Consensus 229 G~-l~v~~--~~~v~~~~~~g 246 (296)
T 3e5z_A 229 GL-IWASA--GDGVHVLTPDG 246 (296)
T ss_dssp SC-EEEEE--TTEEEEECTTS
T ss_pred CC-EEEEc--CCeEEEECCCC
Confidence 98 66665 78999999753
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=4.6e-13 Score=125.04 Aligned_cols=235 Identities=11% Similarity=0.021 Sum_probs=146.8
Q ss_pred CCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee----eccccceeEEEecCCCCCcEEEEec----CCcE
Q 018697 74 CPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL----DAHVGKINCVLWWSSGRHDKLVSID----EENI 145 (351)
Q Consensus 74 ~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~~~~~~~----d~~v 145 (351)
+|+|++++.....++. ..-.||..... .+..+.+... .+|...+..++|||||+.++++.+. +..|
T Consensus 76 ~~dG~~~~~~~~~~~~-~~~~l~~~~~~-----~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i 149 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDK-EKAILYWRQGE-----SGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVL 149 (695)
T ss_dssp EEETTEEEEEEECTTC-SSCEEEEEEST-----TSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEE
T ss_pred EEECCEEEEEEEcCCC-eEEEEEEEcCC-----CCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEE
Confidence 4889888876533322 13455655421 1111222111 2455678999999999964444433 3579
Q ss_pred EEEEcCCCCCC-cccccccccCcccceeeeEECCCCCcEEEeecCCe-------------EEEEEcccCCcC--ceeec-
Q 018697 146 FLWSLDCSNKN-AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS-------------VQFWDLRSMGKT--NSIEH- 208 (351)
Q Consensus 146 ~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~iwd~~~~~~~--~~~~~- 208 (351)
++||+.++... ..... .. ....++|+||++.|+.++.+.. |++|++.+++.. ..+..
T Consensus 150 ~v~dl~tg~~~~~~~~~----~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~ 223 (695)
T 2bkl_A 150 HVIDVDSGEWSKVDVIE----GG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT 223 (695)
T ss_dssp EEEETTTCCBCSSCCBS----CC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC
T ss_pred EEEECCCCCCcCCcccC----cc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC
Confidence 99999976543 11111 10 1268899999999999887665 999999887632 22221
Q ss_pred ce---eEEEEcCCCCCcEEEEecCC-C--eEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEee---CCCeEEE
Q 018697 209 AH---VRNVDYDTKKKHLLVTAADE-S--GIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG---TDSTVNL 279 (351)
Q Consensus 209 ~~---v~~~~~~~~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~i~i 279 (351)
.+ +..+.|+|+|++++++...+ + .|+++|... + ....+..+...+....+ ++| .+++... .++.|.+
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~-~-~~~~l~~~~~~~~~~~~-~~g-~l~~~s~~~~~~~~l~~ 299 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE-K-DFRLLVKGVGAKYEVHA-WKD-RFYVLTDEGAPRQRVFE 299 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC-S-SCEEEEECSSCCEEEEE-ETT-EEEEEECTTCTTCEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC-C-ceEEeecCCCceEEEEe-cCC-cEEEEECCCCCCCEEEE
Confidence 11 78999999999544444333 2 566665543 2 45556656666666666 777 4555544 2578999
Q ss_pred EEcCCCCCCCCCCcccccCCccccccc--ceeecc-c-cceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 280 WLVSTSNHDELPSESLVESPNQRANSL--LNSYSD-Y-EDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~-~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
||+.. +.. ...+.. + ...+..++|+ ++. ++++...|+..+||.++
T Consensus 300 ~d~~~-------------------~~~~~~~~l~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 300 VDPAK-------------------PARASWKEIVPEDSSASLLSVSIV-GGH-LSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EBTTB-------------------CSGGGCEEEECCCSSCEEEEEEEE-TTE-EEEEEEETTEEEEEEEE
T ss_pred EeCCC-------------------CCccCCeEEecCCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEe
Confidence 99876 321 223322 2 4467888888 454 88999999998888654
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.60 E-value=1.2e-11 Score=102.88 Aligned_cols=272 Identities=7% Similarity=-0.031 Sum_probs=168.5
Q ss_pred eeecCCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcc
Q 018697 20 SDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIP 99 (351)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~ 99 (351)
..+..++++. +.++. ..++.+..++.. +.+....+..+...+..+++.+++...++. ..++.|..|+..
T Consensus 23 ~~i~~d~~g~-l~v~~---~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~----~~~~~v~~~d~~ 91 (300)
T 2qc5_A 23 YGITSSEDGK-VWFTQ---HKANKISSLDQS---GRIKEFEVPTPDAKVMCLIVSSLGDIWFTE----NGANKIGKLSKK 91 (300)
T ss_dssp EEEEECTTSC-EEEEE---TTTTEEEEECTT---SCEEEEECSSTTCCEEEEEECTTSCEEEEE----TTTTEEEEECTT
T ss_pred ceeeECCCCC-EEEEc---CCCCeEEEECCC---CceEEEECCCCCCcceeEEECCCCCEEEEe----cCCCeEEEECCC
Confidence 3444455543 44432 234666555533 333322223344678999999988766553 456788888865
Q ss_pred cccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCC
Q 018697 100 ELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH 179 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 179 (351)
. .. ....+......+.++++.+++. ++++...++.|..++.. +. ...... ......+.++++.++
T Consensus 92 g--------~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~-~~~~~~---~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 92 G--------GF-TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GT-IYEYDL---PNKGSYPAFITLGSD 156 (300)
T ss_dssp S--------CE-EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SC-EEEEEC---SSTTCCEEEEEECTT
T ss_pred C--------Ce-EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CC-EEEccC---CCCCCCceeEEECCC
Confidence 1 11 1112222346788999999887 34444557889999876 32 221111 112236889999999
Q ss_pred CCcEEEeecCCeEEEEEcccCCcCceeec-c--e-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCccee-EeeCCCCc
Q 018697 180 DVNAVAATCESSVQFWDLRSMGKTNSIEH-A--H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQ-ELPGHTHW 254 (351)
Q Consensus 180 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~--~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~ 254 (351)
++..++...++.|..+|. +++... +.. . . +..+++++++. ++++....+.|.+||.. +.... .+..+...
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~ 231 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTT--GEISEYDIPTPNAR 231 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTT--CCEEEEECSSTTCC
T ss_pred CCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCC--CcEEEEECCCCCCC
Confidence 885555555788999998 444332 221 1 1 88999999987 77766677889999983 33222 22334566
Q ss_pred eeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEee
Q 018697 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 334 (351)
+.+++++++| .++++...++.|..||... ......+......+.+++++++|. ++++..
T Consensus 232 ~~~i~~d~~g-~l~v~~~~~~~i~~~~~~g-------------------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~ 290 (300)
T 2qc5_A 232 PHAITAGKNS-EIWFTEWGANQIGRITNDN-------------------TIQEYQLQTENAEPHGITFGKDGS-VWFALK 290 (300)
T ss_dssp EEEEEECSTT-CEEEEETTTTEEEEECTTS-------------------CEEEEECCSTTCCCCCEEECTTSC-EEEECS
T ss_pred ceEEEECCCC-CEEEeccCCCeEEEECCCC-------------------cEEEEECCccCCccceeEeCCCCC-EEEEcc
Confidence 8899999999 7777766678999999842 111111222344578999999988 666555
Q ss_pred eCCeEEEeecC
Q 018697 335 YDGRVVVESVK 345 (351)
Q Consensus 335 ~dg~v~vw~~~ 345 (351)
. .|..++.+
T Consensus 291 -~-~i~~~~p~ 299 (300)
T 2qc5_A 291 -C-KIGKLNLN 299 (300)
T ss_dssp -S-EEEEEEEC
T ss_pred -C-ceEEeCCC
Confidence 4 67666653
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.60 E-value=1.2e-12 Score=113.94 Aligned_cols=237 Identities=6% Similarity=0.031 Sum_probs=157.1
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCC--
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE-- 143 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~-- 143 (351)
.....++|+++++.+++ ...++.|++|+.. .......... ..... ++|++++.. ++++..++
T Consensus 131 ~~P~~la~d~~g~lyv~----d~~~~~I~~id~~---------~g~~~~~~~~-~~~~~-ia~~~~g~~-l~~~d~~~~~ 194 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAY----QRDDPRVRLISVD---------DNKVTTVHPG-FKGGK-PAVTKDKQR-VYSIGWEGTH 194 (409)
T ss_dssp CCEEEEEECSTTEEEEE----ETTTTEEEEEETT---------TTEEEEEEET-CCBCB-CEECTTSSE-EEEEBSSTTC
T ss_pred CCceEEEEeCCCCEEEE----ecCCCcEEEEECC---------CCEEEEeecc-CCCCc-eeEecCCCc-EEEEecCCCc
Confidence 46778999998874444 2567899999987 3333333333 23334 999999985 45554433
Q ss_pred cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCcee----ecce--e--E-EE
Q 018697 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSI----EHAH--V--R-NV 214 (351)
Q Consensus 144 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~--v--~-~~ 214 (351)
.|.+++.......... ..........+.+++++|++..|+++..++.|+.||..++... .+ ..+. . . .+
T Consensus 195 ~I~~~d~~~~~~~~~~-g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~i 272 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRI-GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYL 272 (409)
T ss_dssp EEEEEEGGGTTCEEEE-EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEECCCCSCCCCSSCCEE
T ss_pred eEEEEEcCCCceeEEe-eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEecccccCCCCCCccccE
Confidence 7888888754321111 0000112236788999996666777777889999999876532 22 1111 2 3 99
Q ss_pred EcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCC---------------CceeEEEecCCCCCeEEEee-CCCeEE
Q 018697 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT---------------HWTWAVCCNPEYDGFILSAG-TDSTVN 278 (351)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~l~s~~-~dg~i~ 278 (351)
+|+|++.+++++...++.|+.|+... . +..+.++. .....++++|+| .++++-. .++.|+
T Consensus 273 a~~p~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 273 IYYFVDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLR 348 (409)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEE
T ss_pred EEeCCCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEE
Confidence 99996555788778889999999763 2 33443332 347899999999 7888877 889999
Q ss_pred EEEcCCCCCCCCCCcccccCCcccccccceeeccc---------------cceEEEEEeCCCCCceEEEeeeCCeEEEee
Q 018697 279 LWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY---------------EDSVYGLAWSSREPWIFASLSYDGRVVVES 343 (351)
Q Consensus 279 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~ 343 (351)
.|+... +. +.++.++ -....++++++++. ++++-..++.|+.++
T Consensus 349 ~~~~~~-------------------G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 349 KLDILD-------------------GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYA 407 (409)
T ss_dssp EEETTT-------------------TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEE
T ss_pred EEECCC-------------------CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEE
Confidence 999765 22 1222111 23578999999976 888888889999887
Q ss_pred cC
Q 018697 344 VK 345 (351)
Q Consensus 344 ~~ 345 (351)
++
T Consensus 408 ~e 409 (409)
T 3hrp_A 408 VE 409 (409)
T ss_dssp EC
T ss_pred eC
Confidence 63
No 199
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.59 E-value=1.6e-12 Score=109.92 Aligned_cols=226 Identities=8% Similarity=-0.028 Sum_probs=146.3
Q ss_pred eeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEE
Q 018697 68 IWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFL 147 (351)
Q Consensus 68 v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~i 147 (351)
....+|+|+++.++.+ +..++.|.+|+.. ..+. ..+ .....+.+++|++++. ++++.. ..|.+
T Consensus 51 ~egp~~~~~~~~l~~~---d~~~~~i~~~d~~---------~~~~-~~~-~~~~~v~~i~~~~dg~--l~v~~~-~gl~~ 113 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWF---NILERELHELHLA---------SGRK-TVH-ALPFMGSALAKISDSK--QLIASD-DGLFL 113 (326)
T ss_dssp EEEEEEETTTTEEEEE---EGGGTEEEEEETT---------TTEE-EEE-ECSSCEEEEEEEETTE--EEEEET-TEEEE
T ss_pred CcCCeEeCCCCEEEEE---ECCCCEEEEEECC---------CCcE-EEE-ECCCcceEEEEeCCCe--EEEEEC-CCEEE
Confidence 4577899987777665 3567789999976 2222 223 2346799999999998 444443 45999
Q ss_pred EEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec------CCeEEEEEcccCCcCceeecc-e-eEEEEcCCC
Q 018697 148 WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC------ESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTK 219 (351)
Q Consensus 148 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~ 219 (351)
||..++.. ..+...........+.+++++|+++.+++... .+.|..+| +++. ..+... . ...++|+|+
T Consensus 114 ~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~d 189 (326)
T 2ghs_A 114 RDTATGVL-TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPD 189 (326)
T ss_dssp EETTTCCE-EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTT
T ss_pred EECCCCcE-EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCC
Confidence 99876442 11211110111236889999999986554432 24555555 3432 222212 2 789999999
Q ss_pred CCcEEEEecCCCeEEEEecc--cCC-c-----ceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCC
Q 018697 220 KKHLLVTAADESGIHLWDLR--MLK-A-----PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELP 291 (351)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~--~~~-~-----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 291 (351)
++.++++...++.|.+||+. + + . .+..+.........++++++| .++++...++.|..||. .
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~-Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~-~------- 259 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDART-GLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDT-D------- 259 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTT-CCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECT-T-------
T ss_pred CCEEEEEECCCCEEEEEEccccc-CCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECC-C-------
Confidence 98555666678899999985 3 2 2 122222234567889999999 77777666788999998 4
Q ss_pred CcccccCCcccccccceeeccccceEEEEEeC-CCCCceEEEeeeC
Q 018697 292 SESLVESPNQRANSLLNSYSDYEDSVYGLAWS-SREPWIFASLSYD 336 (351)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~d 336 (351)
++.+..+..+...+++++|+ +++..++++...+
T Consensus 260 ------------g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 ------------GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ------------CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred ------------CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 45566666666679999998 8877555555544
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.56 E-value=2.3e-11 Score=104.48 Aligned_cols=276 Identities=8% Similarity=-0.101 Sum_probs=166.3
Q ss_pred CCcceEEEeeeeeCCCC--EEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEee------cCCcceEEEEE
Q 018697 26 TDHTSFLTGTLSLKEEN--EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS------TGESYGAAIWQ 97 (351)
Q Consensus 26 ~~~~~~~~g~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~------~~~d~~i~vw~ 97 (351)
++.+++++.... ..++ .+.+++... ..+. ..+..-.. ..++++|+++.++++... +..++.|.+||
T Consensus 30 ~~~~~~yv~~~~-~~~~~~~v~v~D~~t--~~~~-~~i~~g~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 30 ADGRRSYINLPA-HHSAIIQQWVLDAGS--GSIL-GHVNGGFL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCCEEEEeCCc-ccCCccEEEEEECCC--CeEE-EEecCCCC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 566666665320 1111 566666654 3333 33332222 299999999999886310 12367899999
Q ss_pred cccccCCCCCCcceeeeeeecc-------ccceeEEEecCCCCCcEEEEec-CCcEEEEEcCCCCCCcccccccccCccc
Q 018697 98 IPELYGQLNSPQLERIAALDAH-------VGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
.. +.+.+..+... ......+.|+|+|++++++... ++.|.++| .+++....+....
T Consensus 104 ~~---------t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~------ 167 (373)
T 2mad_H 104 PV---------TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP------ 167 (373)
T ss_pred CC---------CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC------
Confidence 87 45555544321 1234578999999975555433 58899999 8654332201111
Q ss_pred ceeeeEECCCCC-cEEEeecCCeEEEEEcccCCcCceee-----cce---eEEEEcCCCCCcEEEEecCCCeEEEEeccc
Q 018697 170 YLSGGAWDPHDV-NAVAATCESSVQFWDLRSMGKTNSIE-----HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (351)
Q Consensus 170 ~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~-----~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (351)
.++.+.|+++ .+++.+.||.+.++|. +++...... ... .....+.+++..++++. ..+.+.+.|+..
T Consensus 168 --~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~ 243 (373)
T 2mad_H 168 --TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISA 243 (373)
T ss_pred --ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccC
Confidence 1234455554 3455678999999999 766542221 111 23355666665344444 678999999864
Q ss_pred CC-cceeEeeC----------CCCceeEEEecCCCCCeEEEeeC----------CCeEEEEEcCCCCCCCCCCcccccCC
Q 018697 241 LK-APIQELPG----------HTHWTWAVCCNPEYDGFILSAGT----------DSTVNLWLVSTSNHDELPSESLVESP 299 (351)
Q Consensus 241 ~~-~~~~~~~~----------~~~~v~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~ 299 (351)
.. ..+..+.. .......+.++|++ ..++.+.. .+.|.++|..+
T Consensus 244 ~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~-~~lyV~~~~~~~~~~~~~~~~V~VID~~t--------------- 307 (373)
T 2mad_H 244 AGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSS-DGIYLLTSEQSAWKLHAAAKEVTSVTGLV--------------- 307 (373)
T ss_pred CcceEeeeeeecCCcccccceecCceEeEEECCCC-CEEEEEeccCCcccccCCCCeEEEEECCC---------------
Confidence 22 11222211 01223447889998 55544432 35799999998
Q ss_pred cccccccceeeccccceEEEEEeCCCCCceEEEee-eCCeEEEeecCccc
Q 018697 300 NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS-YDGRVVVESVKPFL 348 (351)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~~~~ 348 (351)
.+.+..+... ....+++|+|||+.+++++. .++.|.++|+.+..
T Consensus 308 ----~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 308 ----GQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred ----CEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 7777777543 35789999999984555655 58999999997644
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.56 E-value=2.3e-11 Score=101.27 Aligned_cols=237 Identities=6% Similarity=-0.048 Sum_probs=159.6
Q ss_pred CCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCC
Q 018697 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE 143 (351)
Q Consensus 64 h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~ 143 (351)
....+.++++.+++...++. ..++.|.+|+... .... ..+..+...+.++++.+++. ++++...++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~----~~~~~v~~~~~~~--------~~~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~ 83 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQ----HKANKISSLDQSG--------RIKE-FEVPTPDAKVMCLIVSSLGD-IWFTENGAN 83 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEE----TTTTEEEEECTTS--------CEEE-EECSSTTCCEEEEEECTTSC-EEEEETTTT
T ss_pred CCCCcceeeECCCCCEEEEc----CCCCeEEEECCCC--------ceEE-EECCCCCCcceeEEECCCCC-EEEEecCCC
Confidence 45678899999998766653 4678899998651 1111 12223346788999999987 344445578
Q ss_pred cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCce-ee-cce-eEEEEcCCCC
Q 018697 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS-IE-HAH-VRNVDYDTKK 220 (351)
Q Consensus 144 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~-~~~-v~~~~~~~~~ 220 (351)
.|..+|.. +.. ...... .....+.++++.+++..+++...++.|..+|.. ++.... +. ... +..+++.+++
T Consensus 84 ~v~~~d~~-g~~-~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g 157 (300)
T 2qc5_A 84 KIGKLSKK-GGF-TEYPLP---QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDN 157 (300)
T ss_dssp EEEEECTT-SCE-EEEECS---STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS
T ss_pred eEEEECCC-CCe-EEecCC---CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCC
Confidence 89999987 332 211111 112368899999988866666667899999987 543321 11 112 8999999999
Q ss_pred CcEEEEecCCCeEEEEecccCCccee-EeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCC
Q 018697 221 KHLLVTAADESGIHLWDLRMLKAPIQ-ELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESP 299 (351)
Q Consensus 221 ~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 299 (351)
. ++++...++.|..||.. ++... ....+...+..++++++| .++++....+.|.+||..
T Consensus 158 ~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~---------------- 217 (300)
T 2qc5_A 158 A-LWFTENQNNSIGRITNT--GKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTT---------------- 217 (300)
T ss_dssp S-EEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTT----------------
T ss_pred C-EEEEecCCCeEEEECCC--CcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcCC----------------
Confidence 8 77777778899999983 33222 122344568899999998 777777777889999983
Q ss_pred cccccccce-eeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 300 NQRANSLLN-SYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 300 ~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+.... ....+...+.+++++++|. ++++...++.|..|+..
T Consensus 218 ----g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 218 ----GEISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITND 259 (300)
T ss_dssp ----CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT
T ss_pred ----CcEEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCC
Confidence 22221 1223345688999999988 77776667889998864
No 202
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.55 E-value=2e-12 Score=120.61 Aligned_cols=248 Identities=10% Similarity=0.060 Sum_probs=153.5
Q ss_pred cCCcceeeeeeCCCCCceEEEEeecC-CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEec
Q 018697 63 SHPNEIWDLSSCPFDQRIFSTVFSTG-ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141 (351)
Q Consensus 63 ~h~~~v~~i~~~~~~~~l~~~~~~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 141 (351)
+|...+..++||||+++|+.+...+| ....|++||+. +++.+.. ..+......++|+ |++. ++.++.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~---------tg~~~~~-~~~~~k~~~~~Ws-Dg~~-l~y~~~ 193 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVE---------SKQPLET-PLKDVKFSGISWL-GNEG-FFYSSY 193 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETT---------TCSEEEE-EEEEEESCCCEEE-TTTE-EEEEES
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECC---------CCCCCcc-ccCCceeccEEEe-CCCE-EEEEEe
Confidence 35567889999999999887654333 34689999998 3443322 1111123578899 9986 444443
Q ss_pred C-------------CcEEEEEcCCCCCCcccccccccC-cccceeeeEECCCCCcEEEeec----CCeEEEEEcccCC-c
Q 018697 142 E-------------ENIFLWSLDCSNKNAQVQSKQSSG-MLHYLSGGAWDPHDVNAVAATC----ESSVQFWDLRSMG-K 202 (351)
Q Consensus 142 d-------------~~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~-~ 202 (351)
+ ..|++|++.+.......+... .. +.....++.|+|++++|+.... ...|+++|+.++. .
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~ 272 (693)
T 3iuj_A 194 DKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP 272 (693)
T ss_dssp SCCC-------CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC
T ss_pred cCcccccccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc
Confidence 4 349999998654322222211 12 2234678899999998876542 3589999998764 3
Q ss_pred Cceeecce--eEEEEcCCCCCcEEEEecCC---CeEEEEecccCCc-ceeEeeCCCCceeEEEecCCCCCeEEEeeCCC-
Q 018697 203 TNSIEHAH--VRNVDYDTKKKHLLVTAADE---SGIHLWDLRMLKA-PIQELPGHTHWTWAVCCNPEYDGFILSAGTDS- 275 (351)
Q Consensus 203 ~~~~~~~~--v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg- 275 (351)
...+.... .... +++++..+++....+ +.|..+|+..... ..+.+..|...+. .|++++..++++...++
T Consensus 273 ~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 273 LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE
T ss_pred eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe
Confidence 33443222 3333 566666566666544 6899999886331 2356666766665 88999833444444555
Q ss_pred -eEEEEEcCCCCCCCCCCcccccCCcccccccceeec-cccceEEEEEeCCCCCceEEEeee---CCeEEEeecCc
Q 018697 276 -TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-DYEDSVYGLAWSSREPWIFASLSY---DGRVVVESVKP 346 (351)
Q Consensus 276 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~---dg~v~vw~~~~ 346 (351)
.|++||+.. .. ...+. .....+..+.+++++..++++.+. -+.|..||+.+
T Consensus 350 ~~l~~~d~~g-------------------~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 350 ARVEQFDYEG-------------------KR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEEEEECTTS-------------------CE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred eEEEEEECCC-------------------Ce-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 678888764 22 22222 234567788889888844444432 27888888754
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.55 E-value=4.3e-12 Score=104.11 Aligned_cols=233 Identities=12% Similarity=-0.021 Sum_probs=149.5
Q ss_pred eeecCCCCcceEEE-eeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEc
Q 018697 20 SDVKADTDHTSFLT-GTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (351)
Q Consensus 20 ~~~~~~~~~~~~~~-g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (351)
..+..++++. +++ +. ..++.|..++. .+.... .....+...+.++++.+++..+++. . ++.|.+|+.
T Consensus 27 ~~i~~~~~g~-l~v~~~---~~~~~i~~~~~--~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~----~-~~~i~~~d~ 94 (270)
T 1rwi_B 27 SGVAVDSAGN-VYVTSE---GMYGRVVKLAT--GSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTD----F-NNRVVTLAA 94 (270)
T ss_dssp EEEEECTTCC-EEEEEC---SSSCEEEEECC-------E-ECCCCSCCSCCCEEECTTCCEEEEE----T-TTEEEEECT
T ss_pred cceEECCCCC-EEEEcc---CCCCcEEEecC--CCcccc-eEeeCCcCCcceeEECCCCCEEEEc----C-CCEEEEEeC
Confidence 3445556654 444 32 23466665543 222211 1112334578899999988744442 3 778999997
Q ss_pred ccccCCCCCCcceeeeeee-ccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEEC
Q 018697 99 PELYGQLNSPQLERIAALD-AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD 177 (351)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 177 (351)
.. . ....+. .....+.++++.+++. ++++...++.|.+|+..+.... .... .....+.+++++
T Consensus 95 ~~---------~-~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~--~~~~---~~~~~p~~i~~~ 158 (270)
T 1rwi_B 95 GS---------N-NQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQT--VLPF---TGLNDPDGVAVD 158 (270)
T ss_dssp TC---------S-CCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCE--ECCC---CSCCSCCCEEEC
T ss_pred CC---------c-eEeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeE--eecc---ccCCCceeEEEe
Confidence 62 1 122222 2235688999999987 4555566789999976532211 1111 112357889999
Q ss_pred CCCCcEEEeecCCeEEEEEcccCCcCceeecc-e-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee-CCCCc
Q 018697 178 PHDVNAVAATCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-GHTHW 254 (351)
Q Consensus 178 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~ 254 (351)
++++.+++...++.|.+||............. . +..++++++|. ++++...++.|.+||... .. ..... .+...
T Consensus 159 ~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~-~~-~~~~~~~~~~~ 235 (270)
T 1rwi_B 159 NSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGS-TT-STVLPFTGLNT 235 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTC-SC-CEECCCCSCSC
T ss_pred CCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCC-Cc-ceeeccCCCCC
Confidence 99985555566789999998765433222212 2 88999999996 788777889999999875 32 22222 23356
Q ss_pred eeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
+.+++++|+| .++++...++.|++++...
T Consensus 236 p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 236 PLAVAVDSDR-TVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEEEEECTTC-CEEEEEGGGTEEEEECCCG
T ss_pred ceeEEECCCC-CEEEEECCCCEEEEEcCCC
Confidence 8999999999 8888889999999999986
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.54 E-value=5.3e-12 Score=105.71 Aligned_cols=235 Identities=8% Similarity=-0.040 Sum_probs=149.0
Q ss_pred eecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEE-
Q 018697 61 LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVS- 139 (351)
Q Consensus 61 ~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~- 139 (351)
+...........|+|+++.|+.+ +..++.|..|+.. . + ...+..+...+..++++++|+ ++++
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~---d~~~~~i~~~~~~---------g-~-~~~~~~~~~~~~gl~~d~dG~--l~v~~ 103 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWS---DLVGRRVLGWRED---------G-T-VDVLLDATAFTNGNAVDAQQR--LVHCE 103 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEE---ETTTTEEEEEETT---------S-C-EEEEEESCSCEEEEEECTTSC--EEEEE
T ss_pred EecCCcCccCCeEeCCCCEEEEE---ECCCCEEEEEeCC---------C-C-EEEEeCCCCccceeeECCCCC--EEEEE
Confidence 33445567789999999866665 3677889999864 1 1 334555667789999999998 4554
Q ss_pred ecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEE----eec-------------CCeEEEEEcccCCc
Q 018697 140 IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA----ATC-------------ESSVQFWDLRSMGK 202 (351)
Q Consensus 140 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~iwd~~~~~~ 202 (351)
..++.|.+|+.+ +. ...+...........+.+++++|+++..++ +.. .+.|..+|..+++.
T Consensus 104 ~~~~~v~~~~~~-g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~ 181 (305)
T 3dr2_A 104 HGRRAITRSDAD-GQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL 181 (305)
T ss_dssp TTTTEEEEECTT-SC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred CCCCEEEEECCC-CC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence 445789999975 22 222211111111235778999999987775 321 25677788766654
Q ss_pred Cceeecce-eEEEEcCCCCCcEEEEecCC------CeEEEEecccCCccee---Ee-eCCCCceeEEEecCCCCCeEEEe
Q 018697 203 TNSIEHAH-VRNVDYDTKKKHLLVTAADE------SGIHLWDLRMLKAPIQ---EL-PGHTHWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 203 ~~~~~~~~-v~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~---~~-~~~~~~v~~~~~~~~~~~~l~s~ 271 (351)
.... ... ...++|+|+++ .|+.+... +.|++|++.. .. +. .+ .........++++++| ++.+ +
T Consensus 182 ~~~~-~~~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~-~~-l~~~~~~~~~~~~~pdgi~~d~~G-~lwv-~ 255 (305)
T 3dr2_A 182 QRMA-DLDHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRD-GA-LHDRRHFASVPDGLPDGFCVDRGG-WLWS-S 255 (305)
T ss_dssp EEEE-EESSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEET-TE-EEEEEEEECCSSSCCCSEEECTTS-CEEE-C
T ss_pred EEEe-cCCCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecC-CC-ccCCeEEEECCCCCCCeEEECCCC-CEEE-e
Confidence 3332 122 88999999998 45544443 7899999874 22 21 11 1123445678999999 6444 4
Q ss_pred eCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEee
Q 018697 272 GTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVES 343 (351)
Q Consensus 272 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~ 343 (351)
..+ .|.+|+.. ++.+..+..+. .+.+++|+|+++ .|..++.++ +..++
T Consensus 256 ~~~-gv~~~~~~--------------------g~~~~~~~~~~-~~~~~~f~~d~~-~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 256 SGT-GVCVFDSD--------------------GQLLGHIPTPG-TASNCTFDQAQQ-RLFITGGPC-LWMLP 303 (305)
T ss_dssp CSS-EEEEECTT--------------------SCEEEEEECSS-CCCEEEECTTSC-EEEEEETTE-EEEEE
T ss_pred cCC-cEEEECCC--------------------CCEEEEEECCC-ceeEEEEeCCCC-EEEEEcCCe-EEEEE
Confidence 444 48999984 45565665444 488999999888 455555444 43333
No 205
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.53 E-value=5.2e-12 Score=106.85 Aligned_cols=223 Identities=8% Similarity=-0.016 Sum_probs=146.4
Q ss_pred ceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCC
Q 018697 29 TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSP 108 (351)
Q Consensus 29 ~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 108 (351)
.+++++.. .++.+.+++..... +. ..+ ........+++++++ .++++ ...++.|.+||..
T Consensus 54 ~~lyv~~~---~~~~v~viD~~t~~--~~-~~i-~~~~~p~~i~~~~~g-~lyv~---~~~~~~v~~iD~~--------- 113 (328)
T 3dsm_A 54 GIGWIVVN---NSHVIFAIDINTFK--EV-GRI-TGFTSPRYIHFLSDE-KAYVT---QIWDYRIFIINPK--------- 113 (328)
T ss_dssp TEEEEEEG---GGTEEEEEETTTCC--EE-EEE-ECCSSEEEEEEEETT-EEEEE---EBSCSEEEEEETT---------
T ss_pred CEEEEEEc---CCCEEEEEECcccE--EE-EEc-CCCCCCcEEEEeCCC-eEEEE---ECCCCeEEEEECC---------
Confidence 44444432 35777777765432 22 222 345678899999988 55554 2368899999987
Q ss_pred cceeeeeeeccc-----cceeEEEecCCCCCcEEEEe-cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCc
Q 018697 109 QLERIAALDAHV-----GKINCVLWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182 (351)
Q Consensus 109 ~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 182 (351)
+.+....+.... .....+++ ++..++++.. .++.|.++|+.++.....+... .....+.++|+++.
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g------~~p~~i~~~~dG~l 185 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG------IQPTSLVMDKYNKM 185 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS------SCBCCCEECTTSEE
T ss_pred CCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC------CCccceEEcCCCCE
Confidence 555555554332 14556777 3444444444 4889999999875433332221 14578899999986
Q ss_pred EEEeecC----------CeEEEEEcccCCcCceeec--ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCccee-E-
Q 018697 183 AVAATCE----------SSVQFWDLRSMGKTNSIEH--AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQ-E- 247 (351)
Q Consensus 183 l~~~~~d----------~~i~iwd~~~~~~~~~~~~--~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~- 247 (351)
+++...+ +.|.++|..+++....+.. +. +..++++|+++ .++++.. .|.+||..+ .+... .
T Consensus 186 ~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~-~lyv~~~--~v~~~d~~t-~~~~~~~~ 261 (328)
T 3dsm_A 186 WTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD-TLYWINN--DIWRMPVEA-DRVPVRPF 261 (328)
T ss_dssp EEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC-EEEEESS--SEEEEETTC-SSCCSSCS
T ss_pred EEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC-EEEEEcc--EEEEEECCC-Cceeeeee
Confidence 6665544 7899999998876666553 23 89999999998 4555544 899999876 33221 1
Q ss_pred eeCCCCceeEEEecCCCCCeEEEe----eCCCeEEEEEcC
Q 018697 248 LPGHTHWTWAVCCNPEYDGFILSA----GTDSTVNLWLVS 283 (351)
Q Consensus 248 ~~~~~~~v~~~~~~~~~~~~l~s~----~~dg~i~iwd~~ 283 (351)
+.........++++|++..++++. ..++.|.+||..
T Consensus 262 ~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 262 LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 121245688999999553777776 678899999986
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=8.3e-12 Score=106.11 Aligned_cols=281 Identities=8% Similarity=-0.040 Sum_probs=171.0
Q ss_pred cCCCCcceEEEeeee-eCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEe------ecCCcceEEE
Q 018697 23 KADTDHTSFLTGTLS-LKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVF------STGESYGAAI 95 (351)
Q Consensus 23 ~~~~~~~~~~~g~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~------~~~~d~~i~v 95 (351)
...|+..++++.... ....+.+.+++... ..+. ..+..-..+ . ++++|+++.++++.. .|..++.|.+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t--~~v~-~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEA--GRVI-GMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTT--TEEE-EEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCC--CeEE-EEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 346889999988653 12246777776554 3333 333322333 4 999999999887631 0123578999
Q ss_pred EEcccccCCCCCCcceeeeeeeccc-------cceeEEEecCCCCCcEEEEe-cCCcEEEEEcCCCCCCcccccccccCc
Q 018697 96 WQIPELYGQLNSPQLERIAALDAHV-------GKINCVLWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQSSGM 167 (351)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~ 167 (351)
||.. +.+.+.++.... .....+.++|+|++++++.. .++.|.++|+.+.+....+.. . +
T Consensus 114 iD~~---------t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v-~--g- 180 (386)
T 3sjl_D 114 FDPV---------TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV-P--D- 180 (386)
T ss_dssp ECTT---------TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-C--S-
T ss_pred EECC---------CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC-C--C-
Confidence 9998 566666664321 24567899999997555543 378999999997544333321 1 1
Q ss_pred ccceeeeEECCCCCcEEEeecCCeEEEEEccc-CCcCc----eeec--ce-eEEEEc-CCCCCcEEEEecCCCeEEEEec
Q 018697 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRS-MGKTN----SIEH--AH-VRNVDY-DTKKKHLLVTAADESGIHLWDL 238 (351)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~----~~~~--~~-v~~~~~-~~~~~~~l~~~~~dg~i~i~d~ 238 (351)
. ...+....+.+++.+.||.+.+.++.+ ++... .+.. .. ....+| .++|+ +++ .+.+|.|++.|+
T Consensus 181 ---~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~-vs~~g~V~v~d~ 254 (386)
T 3sjl_D 181 ---C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR-LVW-PTYTGKIHQIDL 254 (386)
T ss_dssp ---E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE-EEE-EBTTSEEEEEEC
T ss_pred ---c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc-EEE-EeCCCEEEEEEC
Confidence 1 112222234456667777777777765 33311 1111 11 223455 46776 444 455799999999
Q ss_pred ccCC-cceeEeeC----------CCCceeEEEecCCCCCeEEEeeC----------CCeEEEEEcCCCCCCCCCCccccc
Q 018697 239 RMLK-APIQELPG----------HTHWTWAVCCNPEYDGFILSAGT----------DSTVNLWLVSTSNHDELPSESLVE 297 (351)
Q Consensus 239 ~~~~-~~~~~~~~----------~~~~v~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~ 297 (351)
.... +.+..+.. .......++++|++ ..++.... .+.|.+.|+.+
T Consensus 255 ~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~-~~lyV~~~~~~~~~hk~~~~~V~viD~~t------------- 320 (386)
T 3sjl_D 255 SSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL-DRIYLLVDQRDEWRHKTASRFVVVLDAKT------------- 320 (386)
T ss_dssp TTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT-TEEEEEEEECCTTCTTSCEEEEEEEETTT-------------
T ss_pred CCCcceeecceeccccccccccccCCCcceeeECCCC-CeEEEEeccccccccCCCCCEEEEEECCC-------------
Confidence 7522 12222210 11233457788988 55544432 25799999998
Q ss_pred CCcccccccceeeccccceEEEEEeCCCCC-ceEEEeeeCCeEEEeecCccc
Q 018697 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREP-WIFASLSYDGRVVVESVKPFL 348 (351)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~v~vw~~~~~~ 348 (351)
.+.+..+... ..++++++++|++ .++++...++.|.++|..+..
T Consensus 321 ------~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 321 ------GERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp ------CCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ------CeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 7888777543 3688999999986 344555669999999987643
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.50 E-value=8.8e-12 Score=117.22 Aligned_cols=239 Identities=10% Similarity=0.034 Sum_probs=143.2
Q ss_pred CCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeee----eeccccceeEEEecCCCCCcEEEEecCC----cE
Q 018697 74 CPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA----LDAHVGKINCVLWWSSGRHDKLVSIDEE----NI 145 (351)
Q Consensus 74 ~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~~~~~~~~d~----~v 145 (351)
+|+|++++.....++.+ .-.+|....... ..+..+.+.. -.+|...+..++|||||+.++++...+| .|
T Consensus 115 ~pdG~~~~~~~~~~~~~-~~~l~~~~~~~~--~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i 191 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMN-QSQLLVRPADAP--VGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTV 191 (741)
T ss_dssp EEETTEEEEEEECSSCS-SCEEEEEETTSC--TTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEE
T ss_pred EEECCEEEEEEEcCCCe-EEEEEEEcCCcc--CCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEE
Confidence 48999988775333322 356676542100 0011121110 1234447889999999996444444433 59
Q ss_pred EEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCC--------------eEEEEEcccCCcC--ceeec-
Q 018697 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES--------------SVQFWDLRSMGKT--NSIEH- 208 (351)
Q Consensus 146 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------~i~iwd~~~~~~~--~~~~~- 208 (351)
++||+.++........ ...+..++|+|| +.|+.++.++ .|++|++.++... ..+..
T Consensus 192 ~v~dl~tg~~~~~~~~------~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~ 264 (741)
T 1yr2_A 192 KFVGVADGKPLADELK------WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP 264 (741)
T ss_dssp EEEETTTCCEEEEEEE------EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEECCCCCCCCccCC------CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccC
Confidence 9999997654321111 112468899999 9888887654 3889998776532 12221
Q ss_pred ce---eEEEEcCCCCCcEEEEecC----CCeEEEEecccCCcc-eeEeeCCCCceeEEEecCCCCCeEEEeeC----CCe
Q 018697 209 AH---VRNVDYDTKKKHLLVTAAD----ESGIHLWDLRMLKAP-IQELPGHTHWTWAVCCNPEYDGFILSAGT----DST 276 (351)
Q Consensus 209 ~~---v~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg~ 276 (351)
.+ +..+.|+|+|++++++... ...|++||+...... ...+..+...+.... +|+| ..|+..+. ++.
T Consensus 265 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg-~~l~~~s~~~~~~~~ 342 (741)
T 1yr2_A 265 ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVG-DQLWFVSGDGAPLKK 342 (741)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEET-TEEEEEECTTCTTCE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccC-CEEEEEECCCCCCCE
Confidence 11 7889999999954444432 348999999863112 556665655555553 4888 66665554 345
Q ss_pred EEEEEcCCCCCCCCCCcccccCCccccc--ccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 277 VNLWLVSTSNHDELPSESLVESPNQRAN--SLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 277 i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
|.+||+.. + .....+..+...+.+++|+ ++. ++++...|+..+||.++
T Consensus 343 l~~~d~~~-------------------~~~~~~~l~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 343 IVRVDLSG-------------------STPRFDTVVPESKDNLESVGIA-GNR-LFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEECSS-------------------SSCEEEEEECCCSSEEEEEEEE-BTE-EEEEEEETTEEEEEEEE
T ss_pred EEEEeCCC-------------------CccccEEEecCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEe
Confidence 99999875 2 1122233445557778887 344 88899999988887654
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=1.3e-11 Score=106.86 Aligned_cols=279 Identities=8% Similarity=-0.065 Sum_probs=167.7
Q ss_pred CCcceEEEeeeeeCCC-CEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEee------cCCcceEEEEEc
Q 018697 26 TDHTSFLTGTLSLKEE-NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS------TGESYGAAIWQI 98 (351)
Q Consensus 26 ~~~~~~~~g~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~------~~~d~~i~vw~~ 98 (351)
++..++++........ +.+.+++... .++. ..+..-..+ .++++|+++.++++... |..++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t--~~vv-~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGST--GRIL-GMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTT--TEEE-EEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCC--CEEE-EEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 5667777765321111 6777777655 3333 333322233 89999999999887421 114678999998
Q ss_pred ccccCCCCCCcceeeeeeecc-------ccceeEEEecCCCCCcEEEEec-CCcEEEEEcCCCCCCcccccccccCcccc
Q 018697 99 PELYGQLNSPQLERIAALDAH-------VGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (351)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 170 (351)
. +.+.+..+... ......+.++|++++++++... ++.|.+.|+.+.+....+... +
T Consensus 157 ~---------t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~---g---- 220 (426)
T 3c75_H 157 V---------TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP---D---- 220 (426)
T ss_dssp T---------TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC---S----
T ss_pred C---------CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC---C----
Confidence 8 56666665421 1235678999999975555433 689999999975433332211 1
Q ss_pred eeeeEECCCC-CcEEEeecCCeEEEEEcccCCcCc----eeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCC
Q 018697 171 LSGGAWDPHD-VNAVAATCESSVQFWDLRSMGKTN----SIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242 (351)
Q Consensus 171 v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~----~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 242 (351)
. ....|++ ..+++.+.||.+.+.++.+++... .+.... ...+.+.+++..+++ ....+.+.+.|+....
T Consensus 221 ~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~-~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 221 C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW-PTYTGKIFQADLTAEG 297 (426)
T ss_dssp E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE-EBTTSEEEEEEECSSC
T ss_pred c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE-EeCCCcEEEEeccCCc
Confidence 1 1223333 334555667777777774443321 111111 234567888874444 4567899999986422
Q ss_pred c-ceeEeeC----------CCCceeEEEecCCCCCeEEEee---------CCCeEEEEEcCCCCCCCCCCcccccCCccc
Q 018697 243 A-PIQELPG----------HTHWTWAVCCNPEYDGFILSAG---------TDSTVNLWLVSTSNHDELPSESLVESPNQR 302 (351)
Q Consensus 243 ~-~~~~~~~----------~~~~v~~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (351)
. .+..+.. .......++++|++.+++++.. .++.|.+.|..+
T Consensus 298 ~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T------------------ 359 (426)
T 3c75_H 298 ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET------------------ 359 (426)
T ss_dssp EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT------------------
T ss_pred eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC------------------
Confidence 1 1111110 0111223789999844444432 135799999998
Q ss_pred ccccceeeccccceEEEEEeCCCCCceEEEee-eCCeEEEeecCccc
Q 018697 303 ANSLLNSYSDYEDSVYGLAWSSREPWIFASLS-YDGRVVVESVKPFL 348 (351)
Q Consensus 303 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~~~~ 348 (351)
.+.+..+.... ...++.|+|+++.++++.. .++.|.++|+.+..
T Consensus 360 -~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 360 -GERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp -CCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred -CeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 78888876433 4789999999983444444 69999999998654
No 209
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.47 E-value=7.6e-11 Score=96.93 Aligned_cols=209 Identities=11% Similarity=0.030 Sum_probs=144.4
Q ss_pred CCCCEEEEEEeCCCCCeEEEEeeecCC-cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee
Q 018697 39 KEENEVHLLRLSSGGTELICEGLFSHP-NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD 117 (351)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 117 (351)
..++.|++++... +++... +..+. ..++++.+.|+++.+++ .++.|..||.. ++.+-.+.
T Consensus 12 ~~~~~v~~~d~~t--G~~~w~-~~~~~~~~~~~~~~~pdG~ilvs------~~~~V~~~d~~----------G~~~W~~~ 72 (276)
T 3no2_A 12 SGWNKIAIINKDT--KEIVWE-YPLEKGWECNSVAATKAGEILFS------YSKGAKMITRD----------GRELWNIA 72 (276)
T ss_dssp TTCSEEEEEETTT--TEEEEE-EECCTTCCCCEEEECTTSCEEEE------CBSEEEEECTT----------SCEEEEEE
T ss_pred CCCCEEEEEECCC--CeEEEE-eCCCccCCCcCeEECCCCCEEEe------CCCCEEEECCC----------CCEEEEEc
Confidence 3568888776433 444433 33343 57899999999987763 35678888863 45666665
Q ss_pred cc-ccceeEEEecCCCCCcEEEEec-CCcEEEEEcCCCCCCccccccc-ccCcccceeeeEECCCCCcEEEeecCCeEEE
Q 018697 118 AH-VGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQ-SSGMLHYLSGGAWDPHDVNAVAATCESSVQF 194 (351)
Q Consensus 118 ~h-~~~v~~~~~~~~~~~~~~~~~~-d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 194 (351)
.+ ...+.++.+.++|+. +++.+. ++.|..+|.+ ++......... ...+......+++.++++++++...++.|..
T Consensus 73 ~~~~~~~~~~~~~~dG~~-lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~ 150 (276)
T 3no2_A 73 APAGCEMQTARILPDGNA-LVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 150 (276)
T ss_dssp CCTTCEEEEEEECTTSCE-EEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE
T ss_pred CCCCccccccEECCCCCE-EEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE
Confidence 54 357889999999993 444454 6677777653 33222221111 0122234566788999999999889999999
Q ss_pred EEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCC------CceeEEEecCCCCCe
Q 018697 195 WDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT------HWTWAVCCNPEYDGF 267 (351)
Q Consensus 195 wd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~ 267 (351)
||.+ ++.+..+.... +.++...+++. +++++..++.|..+|..+ ++.+.++..+. ..+..++..++| .+
T Consensus 151 ~d~~-G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~t-G~~~w~~~~~~~~~~~l~~~~~~~~~~~G-~i 226 (276)
T 3no2_A 151 IAPN-GQLLNSVKLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLES-NRIVRRVNANDIEGVQLFFVAQLFPLQNG-GL 226 (276)
T ss_dssp ECTT-SCEEEEEECSSCCCEEEECTTSC-EEEECBTTSEEEEECTTT-CCEEEEEEGGGSBSCCCSEEEEEEECTTS-CE
T ss_pred ECCC-CCEEEEEECCCCccceeEcCCCC-EEEEeCCCCeEEEEeCcC-CcEEEEecCCCCCCccccccccceEcCCC-CE
Confidence 9998 98888887544 77788889997 788888888999999887 66777775332 237888889999 77
Q ss_pred EEEee
Q 018697 268 ILSAG 272 (351)
Q Consensus 268 l~s~~ 272 (351)
+++..
T Consensus 227 ~v~~~ 231 (276)
T 3no2_A 227 YICNW 231 (276)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 77763
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=1.1e-12 Score=111.81 Aligned_cols=174 Identities=11% Similarity=0.050 Sum_probs=119.7
Q ss_pred ceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCC-----cccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEE
Q 018697 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN-----AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWD 196 (351)
Q Consensus 122 ~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 196 (351)
++..+++++... ++++++.+ .+.+|++...... ..........+.. |+.++| ++..|+++ .++.|++||
T Consensus 39 ~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688999999988 35555554 6777987642200 0011101112344 999999 88888888 889999999
Q ss_pred cccCCcCceeecce--eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCC
Q 018697 197 LRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274 (351)
Q Consensus 197 ~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 274 (351)
+++.........-. +.++.+.+. + ++++..||.|.+||+.. ..... +...|++++|+|+| ++.|..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG---~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ---LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTT-CCEEE----EEESEEEEEECSSE---EEEEETT
T ss_pred chhhhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccC-Ccccc----ccCCceEEEEcCCc---eEEEEcC
Confidence 98765433332111 667666544 2 77789999999999986 43332 45689999999998 6778899
Q ss_pred CeEEEEEcCCCCCCCCCCcccccCCccccccc--ceee------c---cccceEEEEEeCCCCCceEEE
Q 018697 275 STVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSY------S---DYEDSVYGLAWSSREPWIFAS 332 (351)
Q Consensus 275 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~~l~s 332 (351)
|.+++|+... .+. ..++ . +|...|.+|.|.+++. ++++
T Consensus 182 g~i~~~~~~~-------------------~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~-flv~ 230 (388)
T 1xip_A 182 RSFQSFAWRN-------------------GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD-FLAV 230 (388)
T ss_dssp SCEEEEEEET-------------------TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE-EEEE
T ss_pred CcEEEEcCCC-------------------ccccccceecCCcccccccCCCeeEEEEEEecCCe-EEEE
Confidence 9999998876 332 2333 2 3678899999999887 4544
No 211
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.44 E-value=5e-10 Score=95.98 Aligned_cols=231 Identities=11% Similarity=0.095 Sum_probs=145.6
Q ss_pred CCCEEEEEEeCCCCC---eEEEEeeecCC-cceeeeee-----------C--CCCCceEEEEeecCCcceEEEEEccccc
Q 018697 40 EENEVHLLRLSSGGT---ELICEGLFSHP-NEIWDLSS-----------C--PFDQRIFSTVFSTGESYGAAIWQIPELY 102 (351)
Q Consensus 40 ~~~~i~~~~~~~~~~---~~~~~~~~~h~-~~v~~i~~-----------~--~~~~~l~~~~~~~~~d~~i~vw~~~~~~ 102 (351)
....+.++++.+++. +++......+. ++.+.+.| + +++++|++. +..++.|.++|+....
T Consensus 41 ~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~---~l~s~~I~viD~~t~p 117 (462)
T 2ece_A 41 RADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVP---GLRSSRIYIIDTKPNP 117 (462)
T ss_dssp CCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEE---BTTTCCEEEEECCSCT
T ss_pred CCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEc---cCCCCeEEEEECCCCC
Confidence 456788888886432 33333332332 24444444 6 788888887 5778899999986321
Q ss_pred CCCCCCcceeeeeee------c-cccceeEEEecCCCCCcEEEEecC------CcEEEEEcCCCCCCcccccccccCccc
Q 018697 103 GQLNSPQLERIAALD------A-HVGKINCVLWWSSGRHDKLVSIDE------ENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 103 ~~~~~~~~~~~~~~~------~-h~~~v~~~~~~~~~~~~~~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
. ..+...+++ . .......+...|+| +++++..+ +.|.++|..+.+......... +...
T Consensus 118 ~-----~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~--~~~~ 188 (462)
T 2ece_A 118 R-----EPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDR--GDQY 188 (462)
T ss_dssp T-----SCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBC--TTCC
T ss_pred C-----CceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCC--CCcc
Confidence 1 234445552 1 11244567788998 46666433 789999998765444433221 1112
Q ss_pred ceeeeEECCCCCcEEEee-------------------cCCeEEEEEcccCCcCceeecc---e-eEEE--EcCCCCCcEE
Q 018697 170 YLSGGAWDPHDVNAVAAT-------------------CESSVQFWDLRSMGKTNSIEHA---H-VRNV--DYDTKKKHLL 224 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~-------------------~d~~i~iwd~~~~~~~~~~~~~---~-v~~~--~~~~~~~~~l 224 (351)
.-+.+.|+|+++.++++. ....|.+||+.+++.+.++..+ . ...+ +|+|++++.+
T Consensus 189 ~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aY 268 (462)
T 2ece_A 189 LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGF 268 (462)
T ss_dssp CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEE
T ss_pred ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEE
Confidence 355688899999888774 3689999999988777777754 2 5555 4599999656
Q ss_pred EEec-----CCCeEEEEecccCCc--ceeEe--eCC----------------CCceeEEEecCCCCCeEEEe-eCCCeEE
Q 018697 225 VTAA-----DESGIHLWDLRMLKA--PIQEL--PGH----------------THWTWAVCCNPEYDGFILSA-GTDSTVN 278 (351)
Q Consensus 225 ~~~~-----~dg~i~i~d~~~~~~--~~~~~--~~~----------------~~~v~~~~~~~~~~~~l~s~-~~dg~i~ 278 (351)
+++. .+++|.+|.... +. ..+.+ ... ......|.++|+| ++|+.+ -..+.|.
T Consensus 269 V~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG-rfLYVSnrg~d~Va 346 (462)
T 2ece_A 269 INMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD-KFLYLSLWGIGEVR 346 (462)
T ss_dssp EEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS-CEEEEEETTTTEEE
T ss_pred EEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC-CEEEEEeCCCCEEE
Confidence 6555 677888776553 21 01111 100 2346789999999 655554 4578999
Q ss_pred EEEcCC
Q 018697 279 LWLVST 284 (351)
Q Consensus 279 iwd~~~ 284 (351)
+||+..
T Consensus 347 vfdV~d 352 (462)
T 2ece_A 347 QYDISN 352 (462)
T ss_dssp EEECSS
T ss_pred EEEecC
Confidence 999964
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=1.1e-11 Score=105.67 Aligned_cols=180 Identities=13% Similarity=0.098 Sum_probs=123.1
Q ss_pred ceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCC--CCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCc
Q 018697 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL--NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (351)
Q Consensus 67 ~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~ 144 (351)
.+..+++++....++++ +.+ .+.+|++....... .....++.... .+.. |+.++| ++.. ++++ .++.
T Consensus 39 ~~nlLais~~~gll~a~----~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~-L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAA----SGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQ-VLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTTTEEEEE----ETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTE-EEEE-ESSE
T ss_pred cccEEEEcCCCCEEEEe----CCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCE-EEEE-cCCc
Confidence 68999999999888875 445 66779987432000 00002222223 4566 999999 7773 4444 7899
Q ss_pred EEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecceeEEEEcCCCCCcEE
Q 018697 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLL 224 (351)
Q Consensus 145 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~v~~~~~~~~~~~~l 224 (351)
|++||+.+....... ..+...+.++.+.+. .+++++.||.|.+||+.++.... +. ..|.+++|+|+| +
T Consensus 108 l~v~dv~sl~~~~~~-----~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~-~~Vs~v~WSpkG---~ 175 (388)
T 1xip_A 108 LYSLDLEELSEFRTV-----TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LA-QNVTSFDVTNSQ---L 175 (388)
T ss_dssp EEEEESSSTTCEEEE-----EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EE-ESEEEEEECSSE---E
T ss_pred EEEEEchhhhccCcc-----ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-cc-CCceEEEEcCCc---e
Confidence 999999864422211 122335777777653 38888999999999999776532 11 129999999999 4
Q ss_pred EEecCCCeEEEEecccCCcc--eeEe------e---CCCCceeEEEecCCCCCeEEEe
Q 018697 225 VTAADESGIHLWDLRMLKAP--IQEL------P---GHTHWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~~l~s~ 271 (351)
+.|..||++++|+... ... ..++ . +|...|.+|.|.+++ .++++-
T Consensus 176 ~vg~~dg~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~y 231 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAVF 231 (388)
T ss_dssp EEEETTSCEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEEE
T ss_pred EEEEcCCcEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCC-eEEEEE
Confidence 5688999999998875 332 3445 2 478899999999988 777763
No 213
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.40 E-value=3.7e-11 Score=102.21 Aligned_cols=222 Identities=9% Similarity=-0.121 Sum_probs=136.7
Q ss_pred eEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEe---------cCCcEEEEEcCCCCCCcccccc
Q 018697 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI---------DEENIFLWSLDCSNKNAQVQSK 162 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~---------~d~~v~iwd~~~~~~~~~~~~~ 162 (351)
.|.+.|.. +.+.+.++.....+ .+.++|+++.++++.. .++.|.+||+.+.+....+...
T Consensus 47 ~vsvID~~---------t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 47 ENWVSCAG---------CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELP 115 (368)
T ss_dssp EEEEEETT---------TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEET
T ss_pred eEEEEECC---------CCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECC
Confidence 78899988 77888888766666 7999999998666653 3688999999987655554322
Q ss_pred cccC--cccceeeeEECCCCCcEEEeec--CCeEEE--EEcccCCcCceeecce---------eEEEEcCCCCCc-----
Q 018697 163 QSSG--MLHYLSGGAWDPHDVNAVAATC--ESSVQF--WDLRSMGKTNSIEHAH---------VRNVDYDTKKKH----- 222 (351)
Q Consensus 163 ~~~~--~~~~v~~~~~~~~~~~l~~~~~--d~~i~i--wd~~~~~~~~~~~~~~---------v~~~~~~~~~~~----- 222 (351)
.... .......++++||+++++++.. +..+.+ +|+.+ +..+..+. -.-++++++++.
T Consensus 116 ~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 116 DAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp TSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEEC
T ss_pred CccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEEC
Confidence 0000 0124668899999999998864 467888 99866 22221100 011222233221
Q ss_pred -------------------------------EEEEecCCCeEEEEecccCC-cceeEeeC-------CC---CceeEEEe
Q 018697 223 -------------------------------LLVTAADESGIHLWDLRMLK-APIQELPG-------HT---HWTWAVCC 260 (351)
Q Consensus 223 -------------------------------~l~~~~~dg~i~i~d~~~~~-~~~~~~~~-------~~---~~v~~~~~ 260 (351)
.++..+. +.+.+.|+.... ..+..+.. +. .....+++
T Consensus 193 ~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 193 AAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred ccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 1111222 556666654311 11111110 00 11122689
Q ss_pred cCCCCCeEEEee---C-----CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEE
Q 018697 261 NPEYDGFILSAG---T-----DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFAS 332 (351)
Q Consensus 261 ~~~~~~~l~s~~---~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 332 (351)
+|++.+++++.. . ++.+.++|+.+ .+.+..+.... ...+++|+|+|+.++++
T Consensus 272 s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-------------------~~vv~~i~vg~-~p~gi~~s~Dg~~l~va 331 (368)
T 1mda_H 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASV-------------------GQTSGPISNGH-DSDAIIAAQDGASDNYA 331 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-------------------CCEEECCEEEE-EECEEEECCSSSCEEEE
T ss_pred cCCCCEEEEEeccccCcccccCCCEEEEECCC-------------------CeEEEEEECCC-CcceEEECCCCCEEEEE
Confidence 999944444333 2 23566999998 77777776544 58899999999867777
Q ss_pred ee-eCCeEEEeecCccc
Q 018697 333 LS-YDGRVVVESVKPFL 348 (351)
Q Consensus 333 ~~-~dg~v~vw~~~~~~ 348 (351)
.. .++.|.++|+.+..
T Consensus 332 ~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 332 NSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EETTTTEEEEEESSSCE
T ss_pred ccCCCCeEEEEECCCCc
Confidence 77 69999999998643
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=6.7e-11 Score=100.67 Aligned_cols=240 Identities=7% Similarity=-0.051 Sum_probs=145.2
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceee----eeeeccccceeEEEecCCCCCcEEEEec
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERI----AALDAHVGKINCVLWWSSGRHDKLVSID 141 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 141 (351)
..+..++++|+++.+++.. ...++.++||.+.. ....+. .....|-..+.++++.++++ ++++...
T Consensus 17 ~~p~~va~~~~g~~~v~~~--~~~~~~~~l~~~~~-------g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLH--QFYQPEMQVAELTQ-------DGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEEC--GGGCCSCSEEEEET-------TEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECH
T ss_pred CCcceEEECCCCCEEEEeC--CCCCCceEEEEECC-------CCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCC
Confidence 6788999999997766641 11223367777651 011100 11223556899999999987 3444433
Q ss_pred -----CCcEEEEEcCCCCCCcccccc-cccCcccceeeeEECCCCCcEEEe-e---cCCeEEEEEcccCCcCceeec---
Q 018697 142 -----EENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGGAWDPHDVNAVAA-T---CESSVQFWDLRSMGKTNSIEH--- 208 (351)
Q Consensus 142 -----d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~-~---~d~~i~iwd~~~~~~~~~~~~--- 208 (351)
+..|.+||+.++.....+... ....+...+..+++++++..++++ . .++.|.+||+.+++....+..
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~ 166 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG 166 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc
Confidence 578999999865433222111 111122356889999866555544 3 578999999886643222110
Q ss_pred ---------------------------ce-eEEEEcCCCCCcEEEEecCC-CeEEEEecccCC--c-----cee--EeeC
Q 018697 209 ---------------------------AH-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRMLK--A-----PIQ--ELPG 250 (351)
Q Consensus 209 ---------------------------~~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~--~-----~~~--~~~~ 250 (351)
.. +..++|+|+++ .|+.+..+ ..+..++..... . ... ...+
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 245 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS 245 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE
T ss_pred ccccccceeECCEEEEeccCCCceeceecccceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc
Confidence 01 57899999998 45555444 466666643110 0 000 1123
Q ss_pred CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeec-cccceEEEEEeCCCCCce
Q 018697 251 HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-DYEDSVYGLAWSSREPWI 329 (351)
Q Consensus 251 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~ 329 (351)
+......++++++| .++++...++.|.+||... ++...... .+...+.+++|.+++. +
T Consensus 246 ~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~-------------------G~~~~~~~~~~~~~p~~va~~~~g~-l 304 (343)
T 2qe8_A 246 EKPICDGISIDKDH-NIYVGDLAHSAIGVITSAD-------------------RAYKLLVTDEKLSWTDSFNFGSDGY-L 304 (343)
T ss_dssp ECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTT-------------------TEEEEEEECGGGSCEEEEEECTTSC-E
T ss_pred cCCCCceEEECCCC-CEEEEccCCCeEEEEECCC-------------------CCEEEEEECCceecCCeeEECCCCc-E
Confidence 34456789999999 8999998899999999844 33222221 1234588999999987 6
Q ss_pred EEEeeeCC
Q 018697 330 FASLSYDG 337 (351)
Q Consensus 330 l~s~~~dg 337 (351)
+++.+..+
T Consensus 305 ~v~~~~~~ 312 (343)
T 2qe8_A 305 YFDCNQLH 312 (343)
T ss_dssp EEEECCGG
T ss_pred EEEeCccc
Confidence 66665433
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.38 E-value=2.1e-10 Score=95.51 Aligned_cols=203 Identities=10% Similarity=0.037 Sum_probs=128.7
Q ss_pred cccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcc
Q 018697 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLR 198 (351)
Q Consensus 119 h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 198 (351)
+..-..+..|++++..++++...++.|..||..++.. .... ....+.+++++++++ ++++. ++.|.+||..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~--~~~~-----~~~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~ 81 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV--QRVT-----MDAPVSSVALRQSGG-YVATI-GTKFCALNWK 81 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEE-----CSSCEEEEEEBTTSS-EEEEE-TTEEEEEETT
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE--EEEe-----CCCceEEEEECCCCC-EEEEE-CCeEEEEECC
Confidence 3344567889997776555556789999999986432 1111 123688999999998 44444 6789999998
Q ss_pred cCCcCceeec-----ce-eEEEEcCCCCCcEEEEecC---------CCeEEEEecccCCcceeEeeCCCCceeEEEecCC
Q 018697 199 SMGKTNSIEH-----AH-VRNVDYDTKKKHLLVTAAD---------ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPE 263 (351)
Q Consensus 199 ~~~~~~~~~~-----~~-v~~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (351)
+++....... .. ++.++++|+|+ ++++... ...-.+|.+...++ +..+..+....+.++|+|+
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEECTT
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEEcCC
Confidence 7654322211 12 88999999998 5554321 12334554443232 3333333455689999999
Q ss_pred CCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEee
Q 018697 264 YDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVES 343 (351)
Q Consensus 264 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~ 343 (351)
+..++++.+.++.|.+||+....... ...+.+..+..+...+.+++++++|. ++++...++.|.+|+
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~------------~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQI------------SNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLD 226 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCE------------EEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEEC
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcc------------cCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEc
Confidence 93355666778899999984200000 00122233333445678999999997 777777788899999
Q ss_pred cC
Q 018697 344 VK 345 (351)
Q Consensus 344 ~~ 345 (351)
.+
T Consensus 227 ~~ 228 (297)
T 3g4e_A 227 PV 228 (297)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.36 E-value=9e-11 Score=109.44 Aligned_cols=198 Identities=14% Similarity=0.131 Sum_probs=130.3
Q ss_pred cccceeEEEecCCCCCcEEEEecC----CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCC----
Q 018697 119 HVGKINCVLWWSSGRHDKLVSIDE----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES---- 190 (351)
Q Consensus 119 h~~~v~~~~~~~~~~~~~~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---- 190 (351)
|...+..++|||||+.++++.+.. ..|++||+.+++....... + .....++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~----~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK----D--VKFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE----E--EESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC----C--ceeccEEEe-CCCEEEEEEecCcccc
Confidence 555788899999999644444332 5799999997653222111 0 024678999 999999887663
Q ss_pred ---------eEEEEEcccCCcC--ceee-cc-e---eEEEEcCCCCCcEEEEecC---CCeEEEEecccCCcceeEeeCC
Q 018697 191 ---------SVQFWDLRSMGKT--NSIE-HA-H---VRNVDYDTKKKHLLVTAAD---ESGIHLWDLRMLKAPIQELPGH 251 (351)
Q Consensus 191 ---------~i~iwd~~~~~~~--~~~~-~~-~---v~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~ 251 (351)
.|++|++.++... ..+. .. + ...+.|+|+|++++++... +..|+++|+.........+..+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 4999998876532 1121 12 2 6789999999966565543 3589999998644356667766
Q ss_pred CCceeEEEecCCCCCeEEEeeCC---CeEEEEEcCCCCCCCCCCcccccCCccccccc--ceeeccccceEEEEEeCCCC
Q 018697 252 THWTWAVCCNPEYDGFILSAGTD---STVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDYEDSVYGLAWSSRE 326 (351)
Q Consensus 252 ~~~v~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 326 (351)
....... ++++|..+++....+ +.|..+|+.. +.. ...+..|...+. .|++++
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~-------------------~~~~~~~~l~~~~~~~~--~~s~~g 337 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN-------------------PGPAHWRDLIPERQQVL--TVHSGS 337 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS-------------------CCGGGCEEEECCCSSCE--EEEEET
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC-------------------CCccccEEEecCCCCEE--EEEEEC
Confidence 6666555 667764555555544 5788899876 222 334555555554 888988
Q ss_pred CceEEEeeeCC--eEEEeecC
Q 018697 327 PWIFASLSYDG--RVVVESVK 345 (351)
Q Consensus 327 ~~~l~s~~~dg--~v~vw~~~ 345 (351)
..++++...++ .|++|++.
T Consensus 338 ~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 338 GYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp TEEEEEEEETTEEEEEEECTT
T ss_pred CEEEEEEEECCeeEEEEEECC
Confidence 85555555665 57888875
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.36 E-value=3e-09 Score=91.28 Aligned_cols=242 Identities=8% Similarity=0.016 Sum_probs=149.6
Q ss_pred eecCCCCcceEEEeeeee------CCCCEEEEEEeCCCCCeEEEEeee-c------CCcceeeeeeCCCCCceEEEEeec
Q 018697 21 DVKADTDHTSFLTGTLSL------KEENEVHLLRLSSGGTELICEGLF-S------HPNEIWDLSSCPFDQRIFSTVFST 87 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~------~~~~~i~~~~~~~~~~~~~~~~~~-~------h~~~v~~i~~~~~~~~l~~~~~~~ 87 (351)
.+.++|++.++++..... ..++.+.+++..... .. ..+. + +......++|+|++++|+++. .
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~~-~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n--~ 144 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--PI-ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ--F 144 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--EE-EEEECCCccccccCCCccceEECCCCCEEEEEe--c
Confidence 566778888888875321 124677777765422 11 1111 1 112345899999999999873 1
Q ss_pred CCcceEEEEEcccccCCCCCCcceeeee-eeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccc-cccc
Q 018697 88 GESYGAAIWQIPELYGQLNSPQLERIAA-LDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS-KQSS 165 (351)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~ 165 (351)
..++.|.++| . +.+.+.. +... .++.+.|++...+++.+.||.+.++|. ++........ ....
T Consensus 145 ~~~~~v~viD-~---------t~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~ 209 (373)
T 2mad_H 145 AAGPAVGLVV-Q---------GGSSDDQLLSSP----TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLT 209 (373)
T ss_pred CCCCeEEEEE-C---------CCCEEeEEcCCC----ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccccc
Confidence 1257899999 7 5566555 4321 135566777665666678999999999 5543311110 0001
Q ss_pred CcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCc--Cceeec-----------ce-eEEEEcCCCCCcEEEEec---
Q 018697 166 GMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK--TNSIEH-----------AH-VRNVDYDTKKKHLLVTAA--- 228 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~-----------~~-v~~~~~~~~~~~~l~~~~--- 228 (351)
+.........+.+++..++..+..+.+.+.|+..... ...+.. +. ...++++|+++.++++..
T Consensus 210 ~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 210 AAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred CCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 1111122345666666666656788999999875431 112210 11 445789999885444433
Q ss_pred ------CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEee-CCCeEEEEEcCC
Q 018697 229 ------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVST 284 (351)
Q Consensus 229 ------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~ 284 (351)
.++.|.++|..+ .+.+.++.. ......+.|+|+|+.+++++. .++.|.++|..+
T Consensus 290 ~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred cccccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 135899999987 666777753 346799999999932777776 589999999998
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.35 E-value=3.1e-09 Score=92.47 Aligned_cols=192 Identities=10% Similarity=-0.005 Sum_probs=128.8
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCC--eEEEEEcc
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES--SVQFWDLR 198 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~ 198 (351)
.....|+|++++. ++++...++.|++||+.++.. ..+.... .... ++|+|+++.|+++..++ .|.++|..
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~-~~~~~~~-----~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKV-TTVHPGF-----KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEE-EEEEETC-----CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEE-EEeeccC-----CCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 3578899999988 455556678999999985322 2222111 1233 89999999888887655 89999987
Q ss_pred cCCcCcee----e-cce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-----eCCCCce--eEEEecCCCC
Q 018697 199 SMGKTNSI----E-HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-----PGHTHWT--WAVCCNPEYD 265 (351)
Q Consensus 199 ~~~~~~~~----~-~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~v--~~~~~~~~~~ 265 (351)
.+.....+ . ... +.+++++|++..+++ +..++.|+.||... .. ...+ .++...- ..++|+|++.
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~-~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKT-QE-VTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTT-CC-EEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCC-CC-EEEEecccccCCCCCCccccEEEeCCCC
Confidence 66543333 1 122 889999995443444 66788999999875 32 2222 1222222 3999999643
Q ss_pred CeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccc---------------cceEEEEEeCCCCCceE
Q 018697 266 GFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY---------------EDSVYGLAWSSREPWIF 330 (351)
Q Consensus 266 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~l 330 (351)
.++++-..++.|+.|+.... +..+.++ -....+++++|+|. ++
T Consensus 280 ~lyv~d~~~~~I~~~~~~g~---------------------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-ly 337 (409)
T 3hrp_A 280 NFYMSDQNLSSVYKITPDGE---------------------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FY 337 (409)
T ss_dssp EEEEEETTTTEEEEECTTCC---------------------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EE
T ss_pred EEEEEeCCCCEEEEEecCCC---------------------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EE
Confidence 77777778889999987641 1111111 13478999999998 88
Q ss_pred EEee-eCCeEEEeecC
Q 018697 331 ASLS-YDGRVVVESVK 345 (351)
Q Consensus 331 ~s~~-~dg~v~vw~~~ 345 (351)
++-. .++.|+.|+++
T Consensus 338 vad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 338 IVDGFKGYCLRKLDIL 353 (409)
T ss_dssp EEETTTTCEEEEEETT
T ss_pred EEeCCCCCEEEEEECC
Confidence 8887 88999999954
No 219
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.33 E-value=3.9e-10 Score=94.47 Aligned_cols=205 Identities=8% Similarity=0.058 Sum_probs=129.2
Q ss_pred ccccceeEEEecCCCCCcEEE-------EecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCC-CCcEEEeecC
Q 018697 118 AHVGKINCVLWWSSGRHDKLV-------SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH-DVNAVAATCE 189 (351)
Q Consensus 118 ~h~~~v~~~~~~~~~~~~~~~-------~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 189 (351)
..-....+++|++++. ++++ ...++.|.+||..++... ........++...+.+++++++ ++ +++++..
T Consensus 15 ~~~~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~ 91 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQ-LFVADMR 91 (314)
T ss_dssp CCCTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSE-EEEEETT
T ss_pred ccCCCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCc-EEEEECC
Confidence 3344567899999887 3555 356789999998754322 1111111123346889999998 55 5555545
Q ss_pred CeEEEEEcccCCcCce-ee--c---ce-eEEEEcCCCCCcEEEEecCC---------------CeEEEEecccCCcceeE
Q 018697 190 SSVQFWDLRSMGKTNS-IE--H---AH-VRNVDYDTKKKHLLVTAADE---------------SGIHLWDLRMLKAPIQE 247 (351)
Q Consensus 190 ~~i~iwd~~~~~~~~~-~~--~---~~-v~~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~ 247 (351)
+.|.+||.. ++.... .. . .. +.++++++++. ++++...+ +.|..||.. ++ +..
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~-~~~ 166 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQ-MIQ 166 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SC-EEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC--CC-EEE
Confidence 589999988 554322 11 0 12 88999999997 66655544 567777754 33 233
Q ss_pred eeCCCCceeEEEec----CCCCCeE-EEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecccc-ceEEEEE
Q 018697 248 LPGHTHWTWAVCCN----PEYDGFI-LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE-DSVYGLA 321 (351)
Q Consensus 248 ~~~~~~~v~~~~~~----~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~ 321 (351)
+..+......++|+ |++ ..+ ++...++.|.+||....... ........+..+. ..+..++
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg-~~l~v~~~~~~~i~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRP-YQLIVAETPTKKLWSYDIKGPAKI-------------ENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCE-EEEEEEETTTTEEEEEEEEETTEE-------------EEEEEEEECCCCSSCEEEEEE
T ss_pred eccCCCCcceEEEecccCCCC-CEEEEEECCCCeEEEEECCCCCcc-------------ccceEEEECCCCCCCCCCceE
Confidence 33333456889999 998 554 55566889999997620000 0011223333343 5678899
Q ss_pred eCCCCCceEEEeeeCCeEEEeecC
Q 018697 322 WSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 322 ~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
++++|. ++++...++.|.+|+.+
T Consensus 233 ~d~~G~-l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 233 FDEDNN-LLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EBTTCC-EEEEEETTTEEEEECTT
T ss_pred ECCCCC-EEEEEcCCCEEEEEcCC
Confidence 999998 77777778899999986
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.31 E-value=2.6e-09 Score=90.83 Aligned_cols=264 Identities=9% Similarity=0.050 Sum_probs=159.2
Q ss_pred ecCCCCcceEEEeeeee------CCCCEEEEEEeCCCCCeEEEEeeecC------CcceeeeeeCCCCCceEEEEeecCC
Q 018697 22 VKADTDHTSFLTGTLSL------KEENEVHLLRLSSGGTELICEGLFSH------PNEIWDLSSCPFDQRIFSTVFSTGE 89 (351)
Q Consensus 22 ~~~~~~~~~~~~g~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~h------~~~v~~i~~~~~~~~l~~~~~~~~~ 89 (351)
+..+|++..++++.... ..++.+.+|+.... ........+. ......++|+|++++++++. ...
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan--~~~ 158 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ--FSP 158 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE--CSS
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEE--cCC
Confidence 66788888888865321 12355666665543 2222211111 12466899999999988863 123
Q ss_pred cceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCccc
Q 018697 90 SYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
++.|.++|+. +.+.+.++.... |....|.+...+++.+.||.+.+.++.+..............-..
T Consensus 159 ~~~VsVID~~---------t~~vv~tI~v~g----~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~ 225 (386)
T 3sjl_D 159 APAVGVVDLE---------GKAFKRMLDVPD----CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE 225 (386)
T ss_dssp SCEEEEEETT---------TTEEEEEEECCS----EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTS
T ss_pred CCeEEEEECC---------CCcEEEEEECCC----cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccc
Confidence 6799999998 677777774322 122335555445566788999888887533321111101000011
Q ss_pred ce-eeeEEC-CCCCcEEEeecCCeEEEEEcccCC--cCceee--------cc----eeEEEEcCCCCCcEEEEecC----
Q 018697 170 YL-SGGAWD-PHDVNAVAATCESSVQFWDLRSMG--KTNSIE--------HA----HVRNVDYDTKKKHLLVTAAD---- 229 (351)
Q Consensus 170 ~v-~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~--------~~----~v~~~~~~~~~~~~l~~~~~---- 229 (351)
++ ....|. ++++.++ .+.+|.|++.|+.+.. ....+. .+ ....++++|++..++++-..
T Consensus 226 ~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~ 304 (386)
T 3sjl_D 226 FLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW 304 (386)
T ss_dssp CBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTT
T ss_pred cccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecccccc
Confidence 22 224564 5665444 6668999999997654 222221 01 14557778998855554321
Q ss_pred -----CCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEE-eeCCCeEEEEEcCCCCCCCCCCcccccCCcccc
Q 018697 230 -----ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILS-AGTDSTVNLWLVSTSNHDELPSESLVESPNQRA 303 (351)
Q Consensus 230 -----dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (351)
...|.++|+.+ .+.+..+.. ...+..+++++++..+|++ ...++.|.++|..+
T Consensus 305 ~hk~~~~~V~viD~~t-~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t------------------- 363 (386)
T 3sjl_D 305 RHKTASRFVVVLDAKT-GERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAES------------------- 363 (386)
T ss_dssp CTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTT-------------------
T ss_pred ccCCCCCEEEEEECCC-CeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCC-------------------
Confidence 25799999998 666777653 3478899999999435555 45689999999998
Q ss_pred cccceeeccccceEEEEEeCCC
Q 018697 304 NSLLNSYSDYEDSVYGLAWSSR 325 (351)
Q Consensus 304 ~~~~~~~~~~~~~v~~~~~~~~ 325 (351)
++.+.++..-.. .+.+.+++|
T Consensus 364 ~k~~~~i~~~~~-p~~l~~s~d 384 (386)
T 3sjl_D 364 GEELRSVNQLGH-GPQVITTAD 384 (386)
T ss_dssp CCEEEEECCCCS-SCCEEEECC
T ss_pred CcEEEEecCCCC-CceeEECCc
Confidence 788777754322 344555554
No 221
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.28 E-value=2.2e-10 Score=101.59 Aligned_cols=239 Identities=14% Similarity=0.042 Sum_probs=154.9
Q ss_pred ceeeeeeCC-----CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecc-ccceeEEEe-c-CCCCCcEEE
Q 018697 67 EIWDLSSCP-----FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH-VGKINCVLW-W-SSGRHDKLV 138 (351)
Q Consensus 67 ~v~~i~~~~-----~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~-~-~~~~~~~~~ 138 (351)
.......|. ||++++.. ...+..|.+.|+. ..+....+... ...+..+++ . |++.+++++
T Consensus 86 d~hh~~~s~t~g~~DG~~lfVn---d~~~~rVavIdl~---------t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~ 153 (595)
T 1fwx_A 86 DLHHVHMSFTEGKYDGRFLFMN---DKANTRVARVRCD---------VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCN 153 (595)
T ss_dssp CBCCEEEEEETTEEEEEEEEEE---ETTTTEEEEEETT---------TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEE
T ss_pred CCCccccCCCCCCcCCCEEEEE---cCCCCEEEEEECC---------CceEeeEEeCCCCCCCcceeeeecCCCcEEEEe
Confidence 334455555 88888886 3667789999998 66766644322 345778887 4 899874444
Q ss_pred E-----------------ecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCC-----------
Q 018697 139 S-----------------IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES----------- 190 (351)
Q Consensus 139 ~-----------------~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------- 190 (351)
+ -.++.+.+.|..+.+...++.... ....++++|+++++++++.+.
T Consensus 154 ~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~ 227 (595)
T 1fwx_A 154 GEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTA 227 (595)
T ss_dssp ECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTC
T ss_pred cccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC------CccceEECCCCCEEEEEecCcccCcchhhccc
Confidence 3 224678899988643333332211 345678899999888887432
Q ss_pred ---------------------------eEEEEEccc--CCc-Cceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecc
Q 018697 191 ---------------------------SVQFWDLRS--MGK-TNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLR 239 (351)
Q Consensus 191 ---------------------------~i~iwd~~~--~~~-~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 239 (351)
.|.+.|.++ ++. +..+..+. ..++.++|||+++++++..+.+|.++|+.
T Consensus 228 ~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 228 AEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp CSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred cccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 467788877 444 44555444 88999999999888888889999999998
Q ss_pred cCC-----------cceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccce
Q 018697 240 MLK-----------APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLN 308 (351)
Q Consensus 240 ~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (351)
+.. ..+.+.. -......++|+|+| ....+.-.|++|.+||+....... .+ ....+.+.
T Consensus 308 ~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~------~g---~~~~~vi~ 376 (595)
T 1fwx_A 308 RFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAY------AG---EKVDPIKD 376 (595)
T ss_dssp GHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHH------HT---CSCCCEEE
T ss_pred ccccccccccCcccceEEEcC-CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhh------cc---cccceeEE
Confidence 531 1222332 23557889999999 878888889999999987510000 00 00023444
Q ss_pred eeccccce-----EEEEEeCCCCCceEEEee
Q 018697 309 SYSDYEDS-----VYGLAWSSREPWIFASLS 334 (351)
Q Consensus 309 ~~~~~~~~-----v~~~~~~~~~~~~l~s~~ 334 (351)
.+..|-.+ -.++..+|||++++++..
T Consensus 377 kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 377 KLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred EeecccccccceeccceEeCCCCCEEEEcCC
Confidence 55444332 234567899996555554
No 222
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.28 E-value=1.3e-08 Score=83.24 Aligned_cols=245 Identities=12% Similarity=0.077 Sum_probs=151.2
Q ss_pred CEEEEEEeCCCCCeE-E-EEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecc
Q 018697 42 NEVHLLRLSSGGTEL-I-CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (351)
Q Consensus 42 ~~i~~~~~~~~~~~~-~-~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h 119 (351)
+.|+.+++....... . ...+......+..++|.+++..|+.+ ....+.|.+++... ......+...
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~---d~~~~~I~~~~~~g---------~~~~~~~~~~ 77 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWT---DISEPSIGRASLHG---------GEPTTIIRQD 77 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEE---ETTTTEEEEEESSS---------CCCEEEECTT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEE---ECCCCEEEEEecCC---------CCcEEEEECC
Confidence 466667766533210 0 01111123467899999988888776 35677899998762 1222222222
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec---CCeEEEEE
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC---ESSVQFWD 196 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd 196 (351)
......+++.+++..++++....+.|.+++++... ...+.. . + ......++++|++..|+.+.. .+.|..++
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~-~--~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFD-T--G-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC-S--S-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEE-C--C-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 24678999999877555555667899999987422 111111 1 1 125688999997777766653 36888888
Q ss_pred cccCCcCceeecc--e-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeC
Q 018697 197 LRSMGKTNSIEHA--H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGT 273 (351)
Q Consensus 197 ~~~~~~~~~~~~~--~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 273 (351)
+... ....+... . ...++++|++..++++-...+.|.++|+.. ......+.. ......++.. .+ .++++...
T Consensus 153 ~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P~gi~~d-~~-~lyva~~~ 227 (267)
T 1npe_A 153 MDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYPFAVTSY-GK-NLYYTDWK 227 (267)
T ss_dssp TTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSEEEEEEE-TT-EEEEEETT
T ss_pred cCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCceEEEEe-CC-EEEEEECC
Confidence 7643 22333211 2 889999998776777777788999999874 322222332 2334566654 33 56666666
Q ss_pred CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecccc-ceEEEEEeCCCCC
Q 018697 274 DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE-DSVYGLAWSSREP 327 (351)
Q Consensus 274 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 327 (351)
.+.|..+|... ++.+..+.... ....++++.|++.
T Consensus 228 ~~~v~~~d~~~-------------------g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 228 TNSVIAMDLAI-------------------SKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEETTT-------------------TEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCeEEEEeCCC-------------------CCceEEEccccccccceeeecCccC
Confidence 78999999987 67776665432 2367788887753
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.27 E-value=1.2e-09 Score=92.31 Aligned_cols=193 Identities=10% Similarity=0.010 Sum_probs=122.2
Q ss_pred eeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCc
Q 018697 123 INCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK 202 (351)
Q Consensus 123 v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 202 (351)
..+..|+|++..++++...++.|..||..++.. .. .. . ...+.+++|+|+++.+++ + +..|.+||..+++.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~-~~--~---~~~v~~i~~~~dg~l~v~-~-~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-TV-HA--L---PFMGSALAKISDSKQLIA-S-DDGLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EE-EE--C---SSCEEEEEEEETTEEEEE-E-TTEEEEEETTTCCE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EE-EE--C---CCcceEEEEeCCCeEEEE-E-CCCEEEEECCCCcE
Confidence 456789998776556666678999999885422 11 11 1 126889999999886655 3 34599999887764
Q ss_pred Cceeec-----ce-eEEEEcCCCCCcEEEEecC------CCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeE-E
Q 018697 203 TNSIEH-----AH-VRNVDYDTKKKHLLVTAAD------ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI-L 269 (351)
Q Consensus 203 ~~~~~~-----~~-v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~ 269 (351)
...... .. +..++++|+|+ ++++... .+.|..++ . ++ +..+..+......++|+|++ ..+ +
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~-g~-~~~~~~~~~~~~~i~~s~dg-~~lyv 195 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--K-GK-VTKLFADISIPNSICFSPDG-TTGYF 195 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--T-TE-EEEEEEEESSEEEEEECTTS-CEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--C-Cc-EEEeeCCCcccCCeEEcCCC-CEEEE
Confidence 322111 12 88999999998 5554332 24555555 2 43 33333333456889999999 554 5
Q ss_pred EeeCCCeEEEEEcC--CC-CCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 270 SAGTDSTVNLWLVS--TS-NHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 270 s~~~dg~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+.+.++.|.+||+. .+ ... ....+..+......+.+++++++|. ++++...++.|.+|+..
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~--------------~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTG--------------KAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSS--------------CCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTT
T ss_pred EECCCCEEEEEEcccccCCccc--------------CceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCC
Confidence 55667899999986 31 000 0011222222334567899999997 67766667889999874
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.23 E-value=7.9e-09 Score=89.41 Aligned_cols=244 Identities=10% Similarity=0.069 Sum_probs=152.0
Q ss_pred eecCCCCcceEEEeeeee------CCCCEEEEEEeCCCCCeEEEEeeec------CCcceeeeeeCCCCCceEEEEeecC
Q 018697 21 DVKADTDHTSFLTGTLSL------KEENEVHLLRLSSGGTELICEGLFS------HPNEIWDLSSCPFDQRIFSTVFSTG 88 (351)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~------h~~~v~~i~~~~~~~~l~~~~~~~~ 88 (351)
.+..++++.+++++.... ..++.|.+++.... ........+ .......++|+|++++++++. ..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~--~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n--~~ 197 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF--LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQ--FS 197 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEE--CS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEe--cC
Confidence 567888888888875321 12456666655443 232211111 123456899999999998863 12
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccc-ccccCc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS-KQSSGM 167 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~ 167 (351)
.++.|.+.|+. +.+.+.++.... +....|++...+++.+.||.+.+.++.++. ...... ....+.
T Consensus 198 ~~~~VsVID~~---------t~kvv~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~-v~~~~~~~~~v~~ 263 (426)
T 3c75_H 198 PAPAVGVVDLE---------GKTFDRMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGE-TKVTNTEVFHTED 263 (426)
T ss_dssp SSCEEEEEETT---------TTEEEEEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTC-CEEEECCCCSCTT
T ss_pred CCCeEEEEECC---------CCeEEEEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCc-EEEEeeeeeccCC
Confidence 35789999998 667776665422 134456665545555778888888884332 221100 000000
Q ss_pred ccceeeeEECCCCCcEEEeecCCeEEEEEcccCCc--Cceee--------cce----eEEEEcCCCCCcEEEEec-----
Q 018697 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK--TNSIE--------HAH----VRNVDYDTKKKHLLVTAA----- 228 (351)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~--------~~~----v~~~~~~~~~~~~l~~~~----- 228 (351)
......+.+.+++..++.....+.+.+.|+..... ...+. .+. ...++++|+++.++++..
T Consensus 264 ~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g 343 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW 343 (426)
T ss_dssp SCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred CceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence 11123456788988888888889999999865431 11111 011 234789999885555432
Q ss_pred ----CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEee-CCCeEEEEEcCC
Q 018697 229 ----DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVST 284 (351)
Q Consensus 229 ----~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~ 284 (351)
.++.|.++|..+ .+.+.++.. ......+.|+|+++.++++.. .++.|.++|+.+
T Consensus 344 thk~~s~~VsVID~~T-~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 344 KHKAASRFVVVLNAET-GERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp CTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred cccCCCCEEEEEECCC-CeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 135799999998 566777763 235789999999932777776 599999999998
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.22 E-value=2.5e-09 Score=90.99 Aligned_cols=242 Identities=9% Similarity=-0.035 Sum_probs=145.7
Q ss_pred EEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEee------cCCcceEEEEEcccccCCCCCCcceeeeee
Q 018697 43 EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS------TGESYGAAIWQIPELYGQLNSPQLERIAAL 116 (351)
Q Consensus 43 ~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~------~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~ 116 (351)
.+.+++... .+..-..-.+. .+ .+.++|+++.++++... |..++.|.+||.. +.+.+.++
T Consensus 47 ~vsvID~~t--~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~---------T~~vv~~I 112 (368)
T 1mda_H 47 ENWVSCAGC--GVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV---------TFLPIADI 112 (368)
T ss_dssp EEEEEETTT--TEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT---------TCCEEEEE
T ss_pred eEEEEECCC--CeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC---------CCCEEEEE
Confidence 666666443 44443322333 34 79999999999887311 1246889999998 67777777
Q ss_pred ecc-------ccceeEEEecCCCCCcEEEEec-CCcEEE--EEcCCCCCCccccccc----ccCc---------ccceee
Q 018697 117 DAH-------VGKINCVLWWSSGRHDKLVSID-EENIFL--WSLDCSNKNAQVQSKQ----SSGM---------LHYLSG 173 (351)
Q Consensus 117 ~~h-------~~~v~~~~~~~~~~~~~~~~~~-d~~v~i--wd~~~~~~~~~~~~~~----~~~~---------~~~v~~ 173 (351)
... ......++++|||++++++... +..|.+ +|+.+ ...+.... .... ...+..
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEE
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEE
Confidence 543 1245689999999985555433 467888 88854 11110000 0000 000000
Q ss_pred eE--------------------------ECCCCCcEEEeecCCeEEEEEcccCC--cCceeec--------ce----eEE
Q 018697 174 GA--------------------------WDPHDVNAVAATCESSVQFWDLRSMG--KTNSIEH--------AH----VRN 213 (351)
Q Consensus 174 ~~--------------------------~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~--------~~----v~~ 213 (351)
+. ..+++..++..+. +.+.+.|+.+.. ....+.. +. ...
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSC
T ss_pred EECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCccee
Confidence 00 0333444444445 778888876432 1111110 00 223
Q ss_pred EEcCCCCCcEEEEec---C-----CCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEee-CCCeEEEEEcCC
Q 018697 214 VDYDTKKKHLLVTAA---D-----ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVST 284 (351)
Q Consensus 214 ~~~~~~~~~~l~~~~---~-----dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~ 284 (351)
++++|+++.++++.. . ++.+.++|+.+ .+.+..+... .....++|+|+|..++++.. .++.|.++|+.+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 789999985555433 2 23566999998 5566666533 36789999999955677777 699999999999
Q ss_pred CCCCCCCCcccccCCcccccccceeeccccceEEEEEeCC
Q 018697 285 SNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS 324 (351)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 324 (351)
.+.+.++..... .+.+++.+
T Consensus 347 -------------------~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 347 -------------------DQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp -------------------CEEEEECCCCSC-CCEEECCC
T ss_pred -------------------CcEEEEEECCCC-CCEEEeec
Confidence 888888875544 46676654
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=1.2e-09 Score=92.92 Aligned_cols=208 Identities=11% Similarity=0.038 Sum_probs=127.3
Q ss_pred cceeEEEecCCCCCcEEEEe--cCCcEEEEEcCCCCCCccccc--ccccCcccceeeeEECCCCCcEEEeec-----CCe
Q 018697 121 GKINCVLWWSSGRHDKLVSI--DEENIFLWSLDCSNKNAQVQS--KQSSGMLHYLSGGAWDPHDVNAVAATC-----ESS 191 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~--~d~~v~iwd~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~ 191 (351)
..+..++++++|+ ++++.. .++.++||.+.++ ....+.. ....++...+.+++++++++.+++-.. +..
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6789999999998 344432 2343556665422 2111100 111234557899999999875555433 579
Q ss_pred EEEEEcccCCcCceeecc-------e-eEEEEcCCCCCcEEEEec---CCCeEEEEecccCCcceeEeeCCC--------
Q 018697 192 VQFWDLRSMGKTNSIEHA-------H-VRNVDYDTKKKHLLVTAA---DESGIHLWDLRMLKAPIQELPGHT-------- 252 (351)
Q Consensus 192 i~iwd~~~~~~~~~~~~~-------~-v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~-------- 252 (351)
|.+||+.+++.+..+... . +..++++|++..++++.. .++.|.+||+.+ ++..+.+..|.
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~-g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT-GLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT-CCEEEECTTCTTTSCCSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC-CCEEEEecCCCcccccccc
Confidence 999999988765555421 1 689999987654666655 678999999875 43333332211
Q ss_pred ---------------------CceeEEEecCCCCCeEEEeeCCC-eEEEEEcCCCCCCCCCCcccccCCcccccccce--
Q 018697 253 ---------------------HWTWAVCCNPEYDGFILSAGTDS-TVNLWLVSTSNHDELPSESLVESPNQRANSLLN-- 308 (351)
Q Consensus 253 ---------------------~~v~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 308 (351)
..+..|+|+|++ ..|+.+..++ .+..++......... . ..+...
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg-~~ly~~~~~~~~l~~~~~~~~~~~~~--------~---~~~~~~~~ 241 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN-EWLYLSPMHSTSMYRIKSADLSNLQL--------T---DAELGSKI 241 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTS-CEEEEEESSCSEEEEEEHHHHTCTTC--------C---HHHHHTTC
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCC-CEEEEEeCCCCeEEEEEHHHhcCCCC--------C---hhhhhcce
Confidence 235889999999 7777776655 444444321000000 0 011111
Q ss_pred eeccccceEEEEEeCCCCCceEEEeeeCCeEEEeec
Q 018697 309 SYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 309 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
...++......++++++|. ++++...++.|.+|+.
T Consensus 242 ~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 242 ERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEET
T ss_pred EecccCCCCceEEECCCCC-EEEEccCCCeEEEEEC
Confidence 1112333467899999987 8888888999999997
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.20 E-value=2.7e-09 Score=85.98 Aligned_cols=206 Identities=11% Similarity=0.008 Sum_probs=139.0
Q ss_pred ceeeeeeecccc--ceeEEEecCCCCCcEEEEec--CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEE
Q 018697 110 LERIAALDAHVG--KINCVLWWSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA 185 (351)
Q Consensus 110 ~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 185 (351)
.+.+.++ .|.. ....+.|++++. ++++++. ++.|.++|+.+++....+.... ......+++. ++.|+.
T Consensus 9 ~~vv~~~-p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~--g~~lyv 80 (266)
T 2iwa_A 9 VEVLNEF-PHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHKMDD----SYFGEGLTLL--NEKLYQ 80 (266)
T ss_dssp EEEEEEE-ECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEECCT----TCCEEEEEEE--TTEEEE
T ss_pred ceEEEEE-ECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEecCC----CcceEEEEEe--CCEEEE
Confidence 3455555 4543 357999999864 4444443 6899999999866544432211 1122345554 456665
Q ss_pred ee-cCCeEEEEEcccCCcCceeecc-eeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC--CC---ceeEE
Q 018697 186 AT-CESSVQFWDLRSMGKTNSIEHA-HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH--TH---WTWAV 258 (351)
Q Consensus 186 ~~-~d~~i~iwd~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~---~v~~~ 258 (351)
+. .++.+.++|..+.+.+.++..+ . ....++++++.+++ +..++.|.++|..+ .+.+..+..- .. .++.+
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~i~~g~~-~g~glt~Dg~~l~v-s~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKNFTHQMK-DGWGLATDGKILYG-SDGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNEL 157 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEEEECCSS-SCCEEEECSSSEEE-ECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEE
T ss_pred EEecCCEEEEEECCCCcEEEEEECCCC-CeEEEEECCCEEEE-ECCCCeEEEEECCC-CcEEEEEEECCCCcccccceeE
Confidence 54 6899999999998888887644 2 11224457774555 45688999999987 4456665521 12 36788
Q ss_pred EecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccc-------------cceEEEEEeCCC
Q 018697 259 CCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY-------------EDSVYGLAWSSR 325 (351)
Q Consensus 259 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~ 325 (351)
.|. ++ .+++....++.|.+-|..+ ++.+..+... ....++++|+|+
T Consensus 158 e~~-dg-~lyvn~~~~~~V~vID~~t-------------------g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 158 EYI-NG-EVWANIWQTDCIARISAKD-------------------GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp EEE-TT-EEEEEETTSSEEEEEETTT-------------------CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred EEE-CC-EEEEecCCCCeEEEEECCC-------------------CcEEEEEECCCcccccccccccccCceEEEEEcCC
Confidence 888 66 6666666788999999998 7766666421 135689999999
Q ss_pred CCceEEEeeeCCeEEEeecCcc
Q 018697 326 EPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 326 ~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
++.+++++...+.|.+-++.+.
T Consensus 217 ~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 217 NKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTEEEEEETTCSEEEEEEEEEC
T ss_pred CCEEEEECCCCCeEEEEEEecc
Confidence 9878899988999998887653
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.16 E-value=3.3e-09 Score=88.60 Aligned_cols=201 Identities=10% Similarity=0.069 Sum_probs=124.3
Q ss_pred eeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeE
Q 018697 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSV 192 (351)
Q Consensus 113 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 192 (351)
+..+...........|+|+++.++++...++.|..|+.. +. .. .... ....+.+++++++++.+++...++.|
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~-~~~~----~~~~~~gl~~d~dG~l~v~~~~~~~v 109 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VD-VLLD----ATAFTNGNAVDAQQRLVHCEHGRRAI 109 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EE-EEEE----SCSCEEEEEECTTSCEEEEETTTTEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EE-EEeC----CCCccceeeECCCCCEEEEECCCCEE
Confidence 334444555667899999998656666678899999874 22 21 1111 12368899999999855554556889
Q ss_pred EEEEcccCCcCceee--cce----eEEEEcCCCCCcEEEE----ecC-------------CCeEEEEecccCCcceeEee
Q 018697 193 QFWDLRSMGKTNSIE--HAH----VRNVDYDTKKKHLLVT----AAD-------------ESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 193 ~iwd~~~~~~~~~~~--~~~----v~~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~ 249 (351)
.+|+.. ++...... ... +..++++|+|. ++++ |.. .+.|..||..+ ++ +..+.
T Consensus 110 ~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~-~~~~~ 185 (305)
T 3dr2_A 110 TRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SP-LQRMA 185 (305)
T ss_dssp EEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CC-CEEEE
T ss_pred EEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCC-Cc-EEEEe
Confidence 999976 44221111 111 67899999998 6665 332 25677777654 33 23333
Q ss_pred CCCCceeEEEecCCCCCeEEEeeCC------CeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeC
Q 018697 250 GHTHWTWAVCCNPEYDGFILSAGTD------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS 323 (351)
Q Consensus 250 ~~~~~v~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 323 (351)
.....+.++|+|++ ..|+.+... +.|.+|++..... ........ .....+..++++
T Consensus 186 -~~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l--------------~~~~~~~~--~~~~~pdgi~~d 247 (305)
T 3dr2_A 186 -DLDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGAL--------------HDRRHFAS--VPDGLPDGFCVD 247 (305)
T ss_dssp -EESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTEE--------------EEEEEEEC--CSSSCCCSEEEC
T ss_pred -cCCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCCc--------------cCCeEEEE--CCCCCCCeEEEC
Confidence 34556889999999 766666554 7899999875100 00011111 112335678899
Q ss_pred CCCCceEEEeeeCCeEEEeecC
Q 018697 324 SREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 324 ~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
++|. ++++. .+ .|.+|+..
T Consensus 248 ~~G~-lwv~~-~~-gv~~~~~~ 266 (305)
T 3dr2_A 248 RGGW-LWSSS-GT-GVCVFDSD 266 (305)
T ss_dssp TTSC-EEECC-SS-EEEEECTT
T ss_pred CCCC-EEEec-CC-cEEEECCC
Confidence 9998 55544 34 48888864
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.16 E-value=9.7e-09 Score=82.73 Aligned_cols=199 Identities=7% Similarity=-0.081 Sum_probs=136.4
Q ss_pred ecCCc--ceeeeeeCCCCCceEEEEeec-CCcceEEEEEcccccCCCCCCcceeeeeeecccc-ceeEEEecCCCCCcEE
Q 018697 62 FSHPN--EIWDLSSCPFDQRIFSTVFST-GESYGAAIWQIPELYGQLNSPQLERIAALDAHVG-KINCVLWWSSGRHDKL 137 (351)
Q Consensus 62 ~~h~~--~v~~i~~~~~~~~l~~~~~~~-~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~ 137 (351)
..|.. ....+.|+|++ .|+.+. + ..++.|++.|+. +++.+..+..... ....+++. +..+++
T Consensus 15 ~p~~~~~f~~Gl~~~~dg-~Lyvst--g~~~~s~v~~iD~~---------tg~v~~~i~l~~~~fgeGi~~~--g~~lyv 80 (266)
T 2iwa_A 15 FPHDPYAFTQGLVYAEND-TLFEST--GLYGRSSVRQVALQ---------TGKVENIHKMDDSYFGEGLTLL--NEKLYQ 80 (266)
T ss_dssp EECCTTCCEEEEEECSTT-EEEEEE--CSTTTCEEEEEETT---------TCCEEEEEECCTTCCEEEEEEE--TTEEEE
T ss_pred EECCCCCCcccEEEeCCC-eEEEEC--CCCCCCEEEEEECC---------CCCEEEEEecCCCcceEEEEEe--CCEEEE
Confidence 34554 35799999986 555542 2 125789999998 5666666542221 22234444 555555
Q ss_pred EEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce-------
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH------- 210 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------- 210 (351)
+.-.++.+.++|..+.+....+... .+ . ...++++++.++++..++.|.++|..+.+....+..+.
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~i~~g--~~---~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKNFTHQ--MK---D--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIR 153 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEEEECC--SS---S--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred EEecCCEEEEEECCCCcEEEEEECC--CC---C--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccc
Confidence 5567899999999875444433221 01 1 23355678888888778999999999988777766331
Q ss_pred eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC-------------CCceeEEEecCCCCCeEEEeeCCCeE
Q 018697 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH-------------THWTWAVCCNPEYDGFILSAGTDSTV 277 (351)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~s~~~dg~i 277 (351)
++.+.|. ++. +++....++.|.+.|..+ .+.+..+... ....+.|+|+|++.++++++...+.+
T Consensus 154 ~nele~~-dg~-lyvn~~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v 230 (266)
T 2iwa_A 154 LNELEYI-NGE-VWANIWQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKL 230 (266)
T ss_dssp EEEEEEE-TTE-EEEEETTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred ceeEEEE-CCE-EEEecCCCCeEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeE
Confidence 6678887 665 667666788999999998 6667776531 12458999999997788888888999
Q ss_pred EEEEcCC
Q 018697 278 NLWLVST 284 (351)
Q Consensus 278 ~iwd~~~ 284 (351)
...++..
T Consensus 231 ~~i~l~~ 237 (266)
T 2iwa_A 231 FEIKLHL 237 (266)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9988876
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.11 E-value=1.6e-07 Score=76.75 Aligned_cols=197 Identities=9% Similarity=-0.032 Sum_probs=124.8
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee-cCCeEEEEEccc
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRS 199 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 199 (351)
..+..++|++++..++++...++.|..+++.... ....... ......++++++++..|+.+. ..+.|.++++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~----~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-PTTIIRQ----DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-CEEEECT----TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-cEEEEEC----CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 4578999999877655555667899999997532 2222111 112578899999777666654 568999999875
Q ss_pred CCcCceeecc-e-eEEEEcCCCCCcEEEEecC--CCeEEEEecccCCcceeEee-CCCCceeEEEecCCCCCeEEEeeCC
Q 018697 200 MGKTNSIEHA-H-VRNVDYDTKKKHLLVTAAD--ESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCNPEYDGFILSAGTD 274 (351)
Q Consensus 200 ~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d 274 (351)
.......... . ...++++|++.+++++... .+.|..+++.. . ....+. ........++++|++..++++-...
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-T-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-C-CCEEEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-C-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCC
Confidence 4322222222 2 8899999976645555443 47888888763 2 233332 2334578999999873555666667
Q ss_pred CeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 275 STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 275 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+.|..+|... .......... ....+++.. +..++++....+.|.+++..+
T Consensus 189 ~~I~~~~~~g-------------------~~~~~~~~~~-~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 189 HRAECLNPAQ-------------------PGRRKVLEGL-QYPFAVTSY--GKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp TEEEEEETTE-------------------EEEEEEEECC-CSEEEEEEE--TTEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEecCC-------------------CceEEEecCC-CCceEEEEe--CCEEEEEECCCCeEEEEeCCC
Confidence 8999999875 2222222221 224566654 343666666678899988763
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.10 E-value=3.9e-08 Score=84.41 Aligned_cols=211 Identities=15% Similarity=0.166 Sum_probs=128.9
Q ss_pred Eec--CCCCCcEEEEecCCcEEEEEcCCCCCCccccccc-------ccCcccceeeeEECCCCCcEEEeecC------Ce
Q 018697 127 LWW--SSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ-------SSGMLHYLSGGAWDPHDVNAVAATCE------SS 191 (351)
Q Consensus 127 ~~~--~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~d------~~ 191 (351)
.++ ++++++++.+..++.|+++|+.+.....++.... ..+ ......+...|++ .+++...+ +.
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g-~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG-YSRLHTVHCGPDA-IYISALGNEEGEGPGG 165 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHC-EEEEEEEEECSSC-EEEEEEEETTSCSCCE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccC-CCcccceeECCCe-EEEEcCCCcCCCCCCe
Confidence 446 7788755556678999999997543222221111 001 1134556788998 55555444 78
Q ss_pred EEEEEcccCCcCceeecce-----eEEEEcCCCCCcEEEEec-------------------CCCeEEEEecccCCcceeE
Q 018697 192 VQFWDLRSMGKTNSIEHAH-----VRNVDYDTKKKHLLVTAA-------------------DESGIHLWDLRMLKAPIQE 247 (351)
Q Consensus 192 i~iwd~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~ 247 (351)
|.++|.++.+.+..+..+. ...+.|+|+++ .+++.. ...+|.+||+.+ .+.+.+
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~~~t 243 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKRIHS 243 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEEEEE
T ss_pred EEEEECCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCC-CcEeeE
Confidence 9999999998888776432 55688899998 677663 368999999987 666777
Q ss_pred eeCC-C-CceeEEEe--cCCCCCeEEEee------CCCeEEEEEcCCCCCCCCCCcccccCCcccccccc----eeeccc
Q 018697 248 LPGH-T-HWTWAVCC--NPEYDGFILSAG------TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL----NSYSDY 313 (351)
Q Consensus 248 ~~~~-~-~~v~~~~~--~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 313 (351)
+..- . .....+.| +|++ .+++.+. .+++|.+|....+.-+ ....-+.......+ .+ ..+.+-
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg-~~aYV~~e~~~~~Lss~V~v~~~d~g~~~--~~~vIdi~~~~v~~-~lp~~~~~f~~~ 319 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTK-LMGFINMVVSLKDLSSSIWLWFYEDGKWN--AEKVIEIPAEPLEG-NLPEILKPFKAV 319 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTC-CEEEEEEEEETTTCCEEEEEEEEETTEEE--EEEEEEECCEECCS-SCCGGGGGGTEE
T ss_pred EecCCCCCccceeEeeECCCC-CEEEEEEeeeccCCCceEEEEEecCCcee--EEEEEeCCCccccc-cccccccccccC
Confidence 7642 1 23445555 9999 6655554 5678887766431000 00000000000000 00 000111
Q ss_pred cceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 314 EDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 314 ~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
......|.++|||+++.++.-..+.|.+||+.
T Consensus 320 ~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 320 PPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 23468899999999777777788999999985
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.09 E-value=5e-11 Score=102.38 Aligned_cols=174 Identities=11% Similarity=0.022 Sum_probs=95.7
Q ss_pred EEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---eE
Q 018697 136 KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VR 212 (351)
Q Consensus 136 ~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---v~ 212 (351)
+++++.|+.|+.||..+++....... . .+.+..+..++..+++++.|+.|+.||.++++.+....... +.
T Consensus 12 v~~gs~dg~v~a~d~~tG~~~W~~~~-~------~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 12 LFVSTLDGSLHAVSKRTGSIKWTLKE-D------PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC-C------CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred EEEEcCCCEEEEEECCCCCEEEEecC-C------CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 67778899999999998766554432 1 34444555667777777899999999999988765554221 21
Q ss_pred -EEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCC
Q 018697 213 -NVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELP 291 (351)
Q Consensus 213 -~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 291 (351)
+..+. .+. .+++++.++.|+.||.++ ++.+..+..+. ...++|++ ..+++++.|+.|+.||.++
T Consensus 85 ~sp~~~-~~~-~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~-~~v~~~~~dg~v~a~d~~t------- 149 (369)
T 2hz6_A 85 ASPCRS-SDG-ILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPST-SLLYLGRTEYTITMYDTKT------- 149 (369)
T ss_dssp TCSCC-------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSS-------
T ss_pred cCceEe-cCC-EEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccC-CEEEEEecCCEEEEEECCC-------
Confidence 11121 233 577788899999999987 65666665443 23456777 7888899999999999998
Q ss_pred CcccccCCcccccccceeeccccceEEEEEeCCCC---CceEEEeeeCCeEEEeecCc
Q 018697 292 SESLVESPNQRANSLLNSYSDYEDSVYGLAWSSRE---PWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~s~~~dg~v~vw~~~~ 346 (351)
++.+..+..+. .....+.++. . .++.++.||.|+.||..+
T Consensus 150 ------------G~~~W~~~~~~--~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 150 ------------RELRWNATYFD--YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp ------------SSCCCEEEEEE--ECCBCCCCCTTCCC-CEEEEETSCEEEEECTTT
T ss_pred ------------CCEEEeEeccc--ccCccccCCccccc-eEEEECCCCEEEEEECCC
Confidence 66655553221 2233344431 3 466778899999999864
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.09 E-value=1.6e-10 Score=99.31 Aligned_cols=182 Identities=9% Similarity=-0.051 Sum_probs=95.3
Q ss_pred CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCC
Q 018697 76 FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNK 155 (351)
Q Consensus 76 ~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~ 155 (351)
++..++++ +.|+.|..||.. +++.+-.+.. +.+.+..+..++. ++++++.|+.|+.||..+++.
T Consensus 8 ~~~~v~~g----s~dg~v~a~d~~---------tG~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 8 PETLLFVS----TLDGSLHAVSKR---------TGSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp CTTEEEEE----ETTSEEEEEETT---------TCCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CC
T ss_pred eCCEEEEE----cCCCEEEEEECC---------CCCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCce
Confidence 35566664 578999999987 5666656654 4555555566665 355557899999999987665
Q ss_pred CcccccccccCcccceee-eEECCCCCcEEEeecCCeEEEEEcccCCcCceeecceeEEEEcCCCCCcEEEEecCCCeEE
Q 018697 156 NAQVQSKQSSGMLHYLSG-GAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIH 234 (351)
Q Consensus 156 ~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 234 (351)
......... ..+.+ ..+. .+..+++++.++.|+.||.++++.+..+.... ...++|++. .+++++.++.|+
T Consensus 72 ~w~~~~~~~----~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~-~v~~~~~dg~v~ 143 (369)
T 2hz6_A 72 LTKLPFTIP----ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTS-LLYLGRTEYTIT 143 (369)
T ss_dssp SEECSCCHH----HHHTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEE
T ss_pred eeeeeccCc----cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCC-EEEEEecCCEEE
Confidence 433221110 01111 1111 34567788889999999999999887776432 234556666 688889999999
Q ss_pred EEecccCCcceeEeeCCCCceeEEEecCCC--CCeEEEeeCCCeEEEEEcCC
Q 018697 235 LWDLRMLKAPIQELPGHTHWTWAVCCNPEY--DGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i~iwd~~~ 284 (351)
.||.++ ++.+..+..+ ......++++. ...++.++.||.|..||..+
T Consensus 144 a~d~~t-G~~~W~~~~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 144 MYDTKT-RELRWNATYF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp CCCSSS-SSCCCEEEEE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred EEECCC-CCEEEeEecc--cccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 999987 5555554421 12233344421 13566788899999999988
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.05 E-value=2e-08 Score=79.92 Aligned_cols=189 Identities=11% Similarity=0.082 Sum_probs=121.9
Q ss_pred eeeeeeccccc--eeEEEecCCCCCcEEEEecCC--cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee
Q 018697 112 RIAALDAHVGK--INCVLWWSSGRHDKLVSIDEE--NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187 (351)
Q Consensus 112 ~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (351)
.+.++ .|... ...+.|+ ++ .++.+++.+| .|+++|+.+++......... ........++++.|+...
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~------~~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELGK------RYFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECCT------TCCEEEEEEETTEEEEEE
T ss_pred EEEEe-cCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecCC------ccceeEEEEeCCEEEEEE
Confidence 34455 45433 4788888 55 4555667765 89999999876554443211 232222222455666554
Q ss_pred -cCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC--C---CceeEEEe
Q 018697 188 -CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH--T---HWTWAVCC 260 (351)
Q Consensus 188 -~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~---~~v~~~~~ 260 (351)
.++.+.+||..+.+.+.++..+. -..++ +++.. |+.+..++.|.++|..+ .+.+.++... . ..++.+.|
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~-L~~SdGs~~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQY-LIMSDGTPVLRFLDPES-LTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSSCCCCEE--ECSSC-EEECCSSSEEEEECTTT-CSEEEEEECEETTEECCCEEEEEE
T ss_pred eeCCEEEEEECccCcEEEEEECCCCceEEe--cCCCE-EEEECCCCeEEEEcCCC-CeEEEEEEeccCCccccccceeEE
Confidence 68999999999999888887543 22333 46663 44455578899999987 4456665532 2 23456777
Q ss_pred cCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccc------------cceEEEEEeCCCCCc
Q 018697 261 NPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY------------EDSVYGLAWSSREPW 328 (351)
Q Consensus 261 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~ 328 (351)
. +| .+++..-.+..|.+.|..+ ++.+..+... ....++|+|+|++..
T Consensus 180 ~-~G-~lyan~w~~~~I~vIDp~t-------------------G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~ 238 (262)
T 3nol_A 180 V-DG-EIFANVWQTNKIVRIDPET-------------------GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHR 238 (262)
T ss_dssp E-TT-EEEEEETTSSEEEEECTTT-------------------CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTE
T ss_pred E-CC-EEEEEEccCCeEEEEECCC-------------------CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCE
Confidence 6 66 6666666788999999988 5555544321 235689999999886
Q ss_pred eEEEee
Q 018697 329 IFASLS 334 (351)
Q Consensus 329 ~l~s~~ 334 (351)
++++|-
T Consensus 239 lfVTGK 244 (262)
T 3nol_A 239 LFVTGK 244 (262)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 777764
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=2.5e-08 Score=79.42 Aligned_cols=185 Identities=8% Similarity=0.044 Sum_probs=122.4
Q ss_pred eecCCcc--eeeeeeCCCCCceEEEEeecCCcc--eEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcE
Q 018697 61 LFSHPNE--IWDLSSCPFDQRIFSTVFSTGESY--GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDK 136 (351)
Q Consensus 61 ~~~h~~~--v~~i~~~~~~~~l~~~~~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 136 (351)
...|... ...+.|+ ++ .|..+. |.++ .|+++|+. +++.+..+... .........+++..++
T Consensus 36 ~~phd~~~ftqGL~~~-~~-~Lyest---G~~g~S~v~~vD~~---------Tgkv~~~~~l~-~~~FgeGit~~g~~ly 100 (262)
T 3nol_A 36 SYPHDTKAFTEGFFYR-NG-YFYEST---GLNGRSSIRKVDIE---------SGKTLQQIELG-KRYFGEGISDWKDKIV 100 (262)
T ss_dssp EEECCTTCEEEEEEEE-TT-EEEEEE---EETTEEEEEEECTT---------TCCEEEEEECC-TTCCEEEEEEETTEEE
T ss_pred EecCCCCcccceEEEE-CC-EEEEEC---CCCCCceEEEEECC---------CCcEEEEEecC-CccceeEEEEeCCEEE
Confidence 3456643 3688888 45 444432 4544 89999998 66776666443 3344433344566656
Q ss_pred EEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecc---e---
Q 018697 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA---H--- 210 (351)
Q Consensus 137 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~--- 210 (351)
++.-.++.+.+||..+.+....+.... ....++++++.|+.+..++.|.++|..+.+....+... .
T Consensus 101 ~ltw~~~~v~v~D~~t~~~~~ti~~~~--------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLRQVRSFNYDG--------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSS--------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECC
T ss_pred EEEeeCCEEEEEECccCcEEEEEECCC--------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 666678999999999765554443211 22233457788888877889999999998877776642 2
Q ss_pred -eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC------------CCceeEEEecCCCCCeEEEe
Q 018697 211 -VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH------------THWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 211 -v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~l~s~ 271 (351)
++.+.|. +|. +++..-.+..|.+.|.++ ++.+..+... ....+.|+|+|+++++++||
T Consensus 173 ~lNELe~~-~G~-lyan~w~~~~I~vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 173 ELNELEWV-DGE-IFANVWQTNKIVRIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CEEEEEEE-TTE-EEEEETTSSEEEEECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccceeEEE-CCE-EEEEEccCCeEEEEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 5667776 675 676666788999999987 6666666531 13458999999984444544
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=2.8e-08 Score=79.08 Aligned_cols=185 Identities=11% Similarity=0.097 Sum_probs=124.1
Q ss_pred eecCCcc--eeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEE
Q 018697 61 LFSHPNE--IWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 61 ~~~h~~~--v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 138 (351)
...|... ...+.|+. ..|..+ .+.++.|+++|+. +++.+..+ . ..........+++..++++
T Consensus 48 ~~phd~~~ftqGL~~~~--~~Ly~s---tG~~g~v~~iD~~---------Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~l 111 (268)
T 3nok_A 48 EYPHATNAFTQGLVFHQ--GHFFES---TGHQGTLRQLSLE---------SAQPVWME-R-LGNIFAEGLASDGERLYQL 111 (268)
T ss_dssp EEECCTTCCEEEEEEET--TEEEEE---ETTTTEEEECCSS---------CSSCSEEE-E-CTTCCEEEEEECSSCEEEE
T ss_pred EEcCCCccccceEEEEC--CEEEEE---cCCCCEEEEEECC---------CCcEEeEE-C-CCCcceeEEEEeCCEEEEE
Confidence 3456543 35778863 455555 3788889999988 55666555 2 2233333334456666666
Q ss_pred EecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce-------e
Q 018697 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-------V 211 (351)
Q Consensus 139 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------v 211 (351)
+-.++.+.+||..+.+....+... + .-..++ ++++.|+.+..++.|.++|..+.+....+.... +
T Consensus 112 tw~~~~v~V~D~~Tl~~~~ti~~~---~---eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~l 183 (268)
T 3nok_A 112 TWTEGLLFTWSGMPPQRERTTRYS---G---EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELI 183 (268)
T ss_dssp ESSSCEEEEEETTTTEEEEEEECS---S---CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EccCCEEEEEECCcCcEEEEEeCC---C---ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccc
Confidence 677899999999976554444321 1 223444 467888888779999999999988777776322 5
Q ss_pred EEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC-------------CCceeEEEecCCCCCeEEEee
Q 018697 212 RNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH-------------THWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~s~~ 272 (351)
+.+.|. +|. +++..-.+..|.+.|.++ ++.+..+... ..-.+.|+++|+++++++||-
T Consensus 184 NeLe~~-dG~-lyanvw~s~~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 184 NELECA-NGV-IYANIWHSSDVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEEEE-TTE-EEEEETTCSEEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred cccEEe-CCE-EEEEECCCCeEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 677776 665 676666788999999987 6666665421 135689999999856666653
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.03 E-value=2.9e-07 Score=77.38 Aligned_cols=240 Identities=9% Similarity=0.030 Sum_probs=140.9
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee--------------------ccccceeE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD--------------------AHVGKINC 125 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~--------------------~h~~~v~~ 125 (351)
....+++|.+++..+++. ..++.|..|+.. ... +..+. .....+..
T Consensus 19 ~~p~~i~~d~~g~~l~v~----~~~~~i~~~~~~---------~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~g 84 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTS----VQDGRVIKYEGP---------NSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYD 84 (322)
T ss_dssp SCCCCEECCTTCSSEEEE----CTTSEEEEECCT---------TTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEE
T ss_pred CCceEEEEcCCCCEEEEE----cCCCeEEEECCC---------CCc-eEEEecccccccccccccccchhccccCCCCce
Confidence 345678899988766664 567888888765 111 11111 01135788
Q ss_pred EEecC-CCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECC-CCCcEEEeec---------------
Q 018697 126 VLWWS-SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATC--------------- 188 (351)
Q Consensus 126 ~~~~~-~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~--------------- 188 (351)
+++.+ ++. ++++...+.|..+|..++. ...+..............+++.+ ++...++...
T Consensus 85 i~~~~~~g~--l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~ 161 (322)
T 2fp8_A 85 ISYNLQNNQ--LYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTS 161 (322)
T ss_dssp EEEETTTTE--EEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHT
T ss_pred EEEcCCCCc--EEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehccc
Confidence 99997 665 4555334558888876432 11111111001112467899999 8875555322
Q ss_pred --CCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCC-cceeEeeCCCCceeEEEecCCC
Q 018697 189 --ESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK-APIQELPGHTHWTWAVCCNPEY 264 (351)
Q Consensus 189 --d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~ 264 (351)
++.|..+|..+++......... ...++++|+++.++++-..++.|.+|++.... .....+..... ...++++++|
T Consensus 162 ~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 162 DKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADG 240 (322)
T ss_dssp CCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTS
T ss_pred CCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCC
Confidence 3678888877654322222112 77899999998555555677899999987421 11222221223 7889999999
Q ss_pred CCeEEEeeC----------CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccc----cceEEEEEeCCCCCceE
Q 018697 265 DGFILSAGT----------DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY----EDSVYGLAWSSREPWIF 330 (351)
Q Consensus 265 ~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l 330 (351)
.+.++... .+.|..+|.. ++.+..+... -..+..+++ .++. ++
T Consensus 241 -~l~va~~~~~~~~~~~~~~~~v~~~d~~--------------------G~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~ 297 (322)
T 2fp8_A 241 -HFWVSSSEELDGNMHGRVDPKGIKFDEF--------------------GNILEVIPLPPPFAGEHFEQIQE-HDGL-LY 297 (322)
T ss_dssp -CEEEEEEEETTSSTTSCEEEEEEEECTT--------------------SCEEEEEECCTTTTTSCCCEEEE-ETTE-EE
T ss_pred -CEEEEecCcccccccCCCccEEEEECCC--------------------CCEEEEEECCCCCccccceEEEE-eCCE-EE
Confidence 66665544 4567777754 3444444322 134566666 3455 77
Q ss_pred EEeeeCCeEEEeecCc
Q 018697 331 ASLSYDGRVVVESVKP 346 (351)
Q Consensus 331 ~s~~~dg~v~vw~~~~ 346 (351)
++....+.|.++++..
T Consensus 298 v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 298 IGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECSSCSEEEEEEC--
T ss_pred EeecCCCceEEEeccc
Confidence 7777788999999864
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.02 E-value=5e-08 Score=90.39 Aligned_cols=197 Identities=9% Similarity=-0.031 Sum_probs=126.4
Q ss_pred EEEecCCCCCcEEEEecCC-------------------cEEEEEcCCCCCCcccccccccC----cccceeeeEECCCC-
Q 018697 125 CVLWWSSGRHDKLVSIDEE-------------------NIFLWSLDCSNKNAQVQSKQSSG----MLHYLSGGAWDPHD- 180 (351)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~-------------------~v~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~- 180 (351)
.+++.|++.. ++++..++ .|..+|..+++............ ......-+....+|
T Consensus 247 ~~~~d~~~~~-vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 247 SMTFDAELNT-MYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp CEEEETTTTE-EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred ceeEcCCCCE-EEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 5678888774 44443332 58999998876655443221100 01112222233356
Q ss_pred --CcEEEeecCCeEEEEEcccCCcCceeecce-------------------------------------eEEEEcCCCCC
Q 018697 181 --VNAVAATCESSVQFWDLRSMGKTNSIEHAH-------------------------------------VRNVDYDTKKK 221 (351)
Q Consensus 181 --~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------------------v~~~~~~~~~~ 221 (351)
+.++.++.+|.++++|.++++.+..+.... -..++++|++.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 578888899999999999998765554211 12567888887
Q ss_pred cEEEEecC-------------------------------------------CCeEEEEecccCCcceeEeeCCCCceeEE
Q 018697 222 HLLVTAAD-------------------------------------------ESGIHLWDLRMLKAPIQELPGHTHWTWAV 258 (351)
Q Consensus 222 ~~l~~~~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 258 (351)
++++... .+.|..||+.+ ++.+.++. +..++...
T Consensus 406 -~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~-~~~~~~~g 482 (677)
T 1kb0_A 406 -LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVE-HVSPWNGG 482 (677)
T ss_dssp -EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEE-ESSSCCCC
T ss_pred -EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecC-CCCCCcCc
Confidence 5655432 27899999987 65666655 33445555
Q ss_pred EecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecccc-ceEEEEEeCCCCCceEEEeee--
Q 018697 259 CCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE-DSVYGLAWSSREPWIFASLSY-- 335 (351)
Q Consensus 259 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~-- 335 (351)
.+...+ .+++.++.|+.+++||.++ ++.+..+.... ....-+.|.++|+.+++..+.
T Consensus 483 ~~~~~g-~~v~~g~~dg~l~a~D~~t-------------------G~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~ 542 (677)
T 1kb0_A 483 TLTTAG-NVVFQGTADGRLVAYHAAT-------------------GEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWG 542 (677)
T ss_dssp EEEETT-TEEEEECTTSEEEEEETTT-------------------CCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCC
T ss_pred ceEeCC-CEEEEECCCCcEEEEECCC-------------------CceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCC
Confidence 566777 7888889999999999999 88888876432 222345667788755555332
Q ss_pred --------------CCeEEEeecC
Q 018697 336 --------------DGRVVVESVK 345 (351)
Q Consensus 336 --------------dg~v~vw~~~ 345 (351)
.+.+..|.+.
T Consensus 543 ~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 543 GVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp HHHHHHCCSCSCCCCCEEEEEEET
T ss_pred ccccccccccccCCCCeEEEEecc
Confidence 4678888776
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.99 E-value=6.4e-08 Score=89.84 Aligned_cols=186 Identities=10% Similarity=0.022 Sum_probs=117.4
Q ss_pred EEEecCCCCCcEEEEecCC-------------------cEEEEEcCCCCCCcccccccccC----cccceeeeEECCCCC
Q 018697 125 CVLWWSSGRHDKLVSIDEE-------------------NIFLWSLDCSNKNAQVQSKQSSG----MLHYLSGGAWDPHDV 181 (351)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~-------------------~v~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~ 181 (351)
.+++.|+... ++++..++ .|..+|..+++............ ...++.......+++
T Consensus 239 ~~~~d~~~~~-vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPELNL-LYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTTTE-EEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCCCE-EEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 5678887763 55554444 49999999877655443321110 011111112222444
Q ss_pred ---cEEEeecCCeEEEEEcccCCcCceeecce-----------------------------------------eEEEEcC
Q 018697 182 ---NAVAATCESSVQFWDLRSMGKTNSIEHAH-----------------------------------------VRNVDYD 217 (351)
Q Consensus 182 ---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----------------------------------------v~~~~~~ 217 (351)
.++.++.+|.++++|.++++.+....... ...++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 67888899999999999998763222110 1236788
Q ss_pred CCCCcEEEEecC---------------------------------------------CCeEEEEecccCCcceeEeeCCC
Q 018697 218 TKKKHLLVTAAD---------------------------------------------ESGIHLWDLRMLKAPIQELPGHT 252 (351)
Q Consensus 218 ~~~~~~l~~~~~---------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~ 252 (351)
|+.. ++++... +|.|+.||+.+ ++.+.++..+.
T Consensus 398 p~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~~~ 475 (689)
T 1yiq_A 398 PDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-QQAAWEVPYVT 475 (689)
T ss_dssp TTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT-TEEEEEEEESS
T ss_pred CCCC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC-CCeEeEccCCC
Confidence 8877 5555421 37899999987 66666665433
Q ss_pred CceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccce-EEEEEeCCCCCceEE
Q 018697 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDS-VYGLAWSSREPWIFA 331 (351)
Q Consensus 253 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~ 331 (351)
+...-.+...+ .+++.++.|+.++.||.++ ++.+..++..... ..-+.|..+|+.+++
T Consensus 476 -~~~~g~~~tag-glvf~gt~dg~l~a~D~~t-------------------G~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 476 -IFNGGTLSTAG-NLVFEGSADGRVIAYAADT-------------------GEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp -SCCCCEEEETT-TEEEEECTTSEEEEEETTT-------------------CCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred -CccCccceECC-CEEEEECCCCcEEEEECCC-------------------CccceeeeCCCCcccCceEEEECCEEEEE
Confidence 33334556666 7888999999999999999 8888877644321 234667788886666
Q ss_pred Eee
Q 018697 332 SLS 334 (351)
Q Consensus 332 s~~ 334 (351)
..+
T Consensus 535 ~~~ 537 (689)
T 1yiq_A 535 FMA 537 (689)
T ss_dssp EEE
T ss_pred EEe
Confidence 553
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.98 E-value=6e-08 Score=77.22 Aligned_cols=188 Identities=11% Similarity=-0.007 Sum_probs=123.8
Q ss_pred eeeeeeccccc--eeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEe-ec
Q 018697 112 RIAALDAHVGK--INCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA-TC 188 (351)
Q Consensus 112 ~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~ 188 (351)
.+.++ .|... ...+.|+. ..++++++.+|.|+++|+.+++..... ... ......+++ +++.|+.. -.
T Consensus 45 Vv~~~-phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~----~~FgeGit~--~g~~Ly~ltw~ 114 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RLG----NIFAEGLAS--DGERLYQLTWT 114 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-ECT----TCCEEEEEE--CSSCEEEEESS
T ss_pred EEEEE-cCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC----CcceeEEEE--eCCEEEEEEcc
Confidence 34444 45433 46788873 445666688899999999987766655 221 001223444 44555554 46
Q ss_pred CCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC--CC---CceeEEEecC
Q 018697 189 ESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG--HT---HWTWAVCCNP 262 (351)
Q Consensus 189 d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~v~~~~~~~ 262 (351)
++.+.+||..+.+.+.++.... -..++ +++. .|+.+..++.|+++|..+ .+.+.++.. +. ..++.+.|.
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~-~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~- 189 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNG-KLVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA- 189 (268)
T ss_dssp SCEEEEEETTTTEEEEEEECSSCCCCEE--EETT-EEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECCcCcEEEEEeCCCceeEEe--cCCC-EEEEECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-
Confidence 8999999999998888887443 33333 4666 455455688999999987 455666553 22 234677777
Q ss_pred CCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccc-------------cceEEEEEeCCCCCce
Q 018697 263 EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY-------------EDSVYGLAWSSREPWI 329 (351)
Q Consensus 263 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~ 329 (351)
+| .+++..-.+..|.+.|..+ ++.+..+... ....++|+|+|++..+
T Consensus 190 dG-~lyanvw~s~~I~vIDp~T-------------------G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 190 NG-VIYANIWHSSDVLEIDPAT-------------------GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI 249 (268)
T ss_dssp TT-EEEEEETTCSEEEEECTTT-------------------CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE
T ss_pred CC-EEEEEECCCCeEEEEeCCC-------------------CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEE
Confidence 66 6666665688999999998 6655554321 2357899999988867
Q ss_pred EEEee
Q 018697 330 FASLS 334 (351)
Q Consensus 330 l~s~~ 334 (351)
+++|-
T Consensus 250 fVTGK 254 (268)
T 3nok_A 250 FMTGK 254 (268)
T ss_dssp EEEET
T ss_pred EEeCC
Confidence 77774
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=2.6e-08 Score=92.23 Aligned_cols=233 Identities=10% Similarity=0.037 Sum_probs=143.1
Q ss_pred CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecc-c----cceeEEEecCCCCCcEEEEec------CCc
Q 018697 76 FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH-V----GKINCVLWWSSGRHDKLVSID------EEN 144 (351)
Q Consensus 76 ~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h-~----~~v~~~~~~~~~~~~~~~~~~------d~~ 144 (351)
.+..+++. +.|+.|..+|.. +++.+-.+..+ . ..+.+--...++. +++++. ++.
T Consensus 127 ~~~~v~v~----~~dg~l~alD~~---------tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~--v~v~~~~~~~~~~g~ 191 (677)
T 1kb0_A 127 WKGKVYVG----AWDGRLIALDAA---------TGKEVWHQNTFEGQKGSLTITGAPRVFKGK--VIIGNGGAEYGVRGY 191 (677)
T ss_dssp ETTEEEEE----CTTSEEEEEETT---------TCCEEEEEETTTTCCSSCBCCSCCEEETTE--EEECCBCTTTCCBCE
T ss_pred ECCEEEEE----cCCCEEEEEECC---------CCCEEeeecCCcCcCcCcccccCcEEECCE--EEEEecccccCCCCE
Confidence 35566664 578899999987 55665555433 1 1111110111333 455432 689
Q ss_pred EEEEEcCCCCCCccccccccc---------------------------CcccceeeeEECCCCCcEEEeecCC-------
Q 018697 145 IFLWSLDCSNKNAQVQSKQSS---------------------------GMLHYLSGGAWDPHDVNAVAATCES------- 190 (351)
Q Consensus 145 v~iwd~~~~~~~~~~~~~~~~---------------------------~~~~~v~~~~~~~~~~~l~~~~~d~------- 190 (351)
|+.+|..+++........... +.......++++|++..+++++.++
T Consensus 192 v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~ 271 (677)
T 1kb0_A 192 ITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKV 271 (677)
T ss_dssp EEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHH
T ss_pred EEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCC
Confidence 999999987765443321110 0001123568888888888876553
Q ss_pred ------------eEEEEEcccCCcCceeecce-----------eEEEEcCCCCC--cEEEEecCCCeEEEEecccCCcce
Q 018697 191 ------------SVQFWDLRSMGKTNSIEHAH-----------VRNVDYDTKKK--HLLVTAADESGIHLWDLRMLKAPI 245 (351)
Q Consensus 191 ------------~i~iwd~~~~~~~~~~~~~~-----------v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~ 245 (351)
.|..+|.++++.+..++..+ ...+....+|+ ..++.++.+|.++++|.++ ++++
T Consensus 272 ~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l 350 (677)
T 1kb0_A 272 RSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFI 350 (677)
T ss_dssp HSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEE
T ss_pred CCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEe
Confidence 59999999998877765321 12222223562 3788899999999999987 6565
Q ss_pred eEeeCCC-----------Cce------------------------eEEEecCCCCCeEEEeeCC----------------
Q 018697 246 QELPGHT-----------HWT------------------------WAVCCNPEYDGFILSAGTD---------------- 274 (351)
Q Consensus 246 ~~~~~~~-----------~~v------------------------~~~~~~~~~~~~l~s~~~d---------------- 274 (351)
..+.... .++ ..++++|++ .++++...+
T Consensus 351 ~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~-~~~yv~~~~~~~~~~~~~~~~~g~~ 429 (677)
T 1kb0_A 351 SAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT-GLVYLPAQNVPVNLMDDKKWEFNQA 429 (677)
T ss_dssp EEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT-TEEEEEEEECCCEEEECTTCCTTCC
T ss_pred ccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC-CEEEEeChhcceeeecccccccccc
Confidence 5543211 111 146788887 666665432
Q ss_pred ---------------------------CeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCC
Q 018697 275 ---------------------------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREP 327 (351)
Q Consensus 275 ---------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 327 (351)
+.|..||+.+ ++.+..+.. ..++.+..+..++.
T Consensus 430 ~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-------------------G~~~W~~~~-~~~~~~g~~~~~g~ 489 (677)
T 1kb0_A 430 GPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-------------------QKAAWSVEH-VSPWNGGTLTTAGN 489 (677)
T ss_dssp CTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-------------------TEEEEEEEE-SSSCCCCEEEETTT
T ss_pred cccccccccccccccccccccCCCCCccEEEEEeCCC-------------------CcEEeecCC-CCCCcCcceEeCCC
Confidence 6677788777 666666543 23345555666677
Q ss_pred ceEEEeeeCCeEEEeecCc
Q 018697 328 WIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 328 ~~l~s~~~dg~v~vw~~~~ 346 (351)
+++.++.||.+++||..+
T Consensus 490 -~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 490 -VVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp -EEEEECTTSEEEEEETTT
T ss_pred -EEEEECCCCcEEEEECCC
Confidence 677789999999999875
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.98 E-value=6e-08 Score=81.66 Aligned_cols=220 Identities=5% Similarity=-0.090 Sum_probs=137.6
Q ss_pred CCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCC
Q 018697 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN 156 (351)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~ 156 (351)
+..+.++ ..++.|..+|.. ++.......+...+.++...+++. +.+++.++.|..+|.. +...
T Consensus 107 ~~~l~v~----t~~~~l~~~d~~----------g~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~~ 169 (330)
T 3hxj_A 107 EDILYVT----SMDGHLYAINTD----------GTEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTEK 169 (330)
T ss_dssp TTEEEEE----CTTSEEEEECTT----------SCEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCEE
T ss_pred CCEEEEE----ecCCEEEEEcCC----------CCEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCEe
Confidence 3445553 467778888754 223333334444566667777777 6677777899999987 4332
Q ss_pred cccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce--eEEEEcCCCCCcEEEEecCCCeEE
Q 018697 157 AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIH 234 (351)
Q Consensus 157 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~ 234 (351)
..... ....+.++...+++. +.+++ +.|..+| .+++......... +.++...+++. +..++.++.|.
T Consensus 170 ~~~~~-----~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~ 238 (330)
T 3hxj_A 170 WRFKT-----NDAITSAASIGKDGT-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLY 238 (330)
T ss_dssp EEEEC-----SSCCCSCCEECTTCC-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEE
T ss_pred EEEec-----CCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEE
Confidence 22221 122566677777666 44555 7899999 6666555554332 77888888885 45577778888
Q ss_pred EEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecccc
Q 018697 235 LWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE 314 (351)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (351)
.+|.. +..+..+......+..+.+.+++ .|..++.++.|..+|. . ++.+..+....
T Consensus 239 ~~~~~--g~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~ggl~~~d~-~-------------------g~~~~~~~~~~ 294 (330)
T 3hxj_A 239 AINPD--GTEKWRFKTGKRIESSPVIGNTD--TIYFGSYDGHLYAINP-D-------------------GTEKWNFETGS 294 (330)
T ss_dssp EECTT--SCEEEEEECSSCCCSCCEECTTS--CEEEECTTCEEEEECT-T-------------------SCEEEEEECSS
T ss_pred EECCC--CCEeEEeeCCCCccccceEcCCC--eEEEecCCCCEEEECC-C-------------------CcEEEEEEcCC
Confidence 88753 44555555444445556666555 5666777888999986 4 45555554444
Q ss_pred ceEEEEEeCCCCCceEEEeeeCCeEEEeecCccccc
Q 018697 315 DSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR 350 (351)
Q Consensus 315 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~ 350 (351)
..+.++...+++. |..++.+|.+++...+...++
T Consensus 295 ~~~~~~~~d~~g~--l~~gt~~G~~~~~~~~~~~~~ 328 (330)
T 3hxj_A 295 WIIATPVIDENGT--IYFGTRNGKFYALFNLEHHHH 328 (330)
T ss_dssp CCCSCCEECTTCC--EEEECTTSCEEEEEC------
T ss_pred ccccceEEcCCCE--EEEEcCCCeEEEEeccccccc
Confidence 5567777878876 556888999999887655443
No 243
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.92 E-value=2.3e-07 Score=73.29 Aligned_cols=185 Identities=11% Similarity=0.055 Sum_probs=121.2
Q ss_pred ecCCc--ceeeeeeCCCCCceEEEEeecCCc--ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEE
Q 018697 62 FSHPN--EIWDLSSCPFDQRIFSTVFSTGES--YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 62 ~~h~~--~v~~i~~~~~~~~l~~~~~~~~~d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 137 (351)
..|.. -...+.|++ + .|..+ .+.+ ..|+.+|+. +++.+..+.... ........+.+..++.
T Consensus 15 ~phd~~~ftqGL~~~~-~-~Lyes---tG~~g~S~v~~vD~~---------tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ 79 (243)
T 3mbr_X 15 YPHDTTAFTEGLFYLR-G-HLYES---TGETGRSSVRKVDLE---------TGRILQRAEVPP-PYFGAGIVAWRDRLIQ 79 (243)
T ss_dssp EECCTTCCEEEEEEET-T-EEEEE---ECCTTSCEEEEEETT---------TCCEEEEEECCT-TCCEEEEEEETTEEEE
T ss_pred cCCCCccccccEEEEC-C-EEEEE---CCCCCCceEEEEECC---------CCCEEEEEeCCC-CcceeEEEEeCCEEEE
Confidence 45664 455888886 4 44444 2454 489999998 667666664332 2333333334565566
Q ss_pred EEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce-------
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH------- 210 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------- 210 (351)
++-.++.+.+||..+.+....+... + .-..++ +++..|+++..++.|.++|..+.+....+....
T Consensus 80 ltw~~~~v~v~D~~tl~~~~ti~~~---~---~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 80 LTWRNHEGFVYDLATLTPRARFRYP---G---EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp EESSSSEEEEEETTTTEEEEEEECS---S---CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred EEeeCCEEEEEECCcCcEEEEEeCC---C---CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 6677899999999875544443321 1 223444 567888888778999999999988777776421
Q ss_pred eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC-------------CCceeEEEecCCCCCeEEEee
Q 018697 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH-------------THWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~s~~ 272 (351)
++.+.+. +|+ +++..-.+..|.+.|.++ ++.+..+... ..-.+.|+++|++.++++||-
T Consensus 152 lNeLe~~-~G~-lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 152 LNELEWV-NGE-LLANVWLTSRIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEEE-TTE-EEEEETTTTEEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ceeeEEe-CCE-EEEEECCCCeEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6667765 565 666665678999999987 6666665411 135689999999855555553
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.92 E-value=1.7e-08 Score=89.60 Aligned_cols=202 Identities=14% Similarity=0.068 Sum_probs=128.1
Q ss_pred CCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEE-C-CCCCcEEEee------------------cC
Q 018697 130 SSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW-D-PHDVNAVAAT------------------CE 189 (351)
Q Consensus 130 ~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~------------------~d 189 (351)
+||+++++....+..|.+.|+.+.+... ++.... ......+++ + |+++++++++ .+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~-ii~ip~---g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDA-ILEIPN---AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEE-EEECSS---CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEee-EEeCCC---CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 3788756655667889999999744322 222111 125667787 5 8999998884 24
Q ss_pred CeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCC-------------------------------------
Q 018697 190 SSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADES------------------------------------- 231 (351)
Q Consensus 190 ~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg------------------------------------- 231 (351)
+.+.+.|..+.+...++..+. ...++++|+|++ +++.+.+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~-~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKW-AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCCCEEECSSSSE-EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCCCeEEEEEEeCCCccceEECCCCCE-EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 689999999888777777433 667889999995 44444332
Q ss_pred -eEEEEeccc--CCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccce
Q 018697 232 -GIHLWDLRM--LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLN 308 (351)
Q Consensus 232 -~i~i~d~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (351)
.|.+.|.++ ....+..+.. .....++.++|||..+++++..+.+|.++|+.+.... . +. ........+.
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~---~---~~-~l~~~~~v~~ 325 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV---F---YE-NADPRSAVVA 325 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH---H---HS-CCCGGGGEEE
T ss_pred CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc---c---cc-ccCcccceEE
Confidence 266666654 1111333332 2345779999999445556667889999999861000 0 00 0000012233
Q ss_pred eeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 309 SYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 309 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
.... ......++|+|+| ...++.-.|+.|.+|+++.
T Consensus 326 ~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 326 EPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCBC-CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred EcCC-CCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 3332 2347899999999 5788888999999999875
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.90 E-value=3.5e-07 Score=72.18 Aligned_cols=191 Identities=8% Similarity=0.026 Sum_probs=121.5
Q ss_pred eeeeeeeccc--cceeEEEecCCCCCcEEEEecC--CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEe
Q 018697 111 ERIAALDAHV--GKINCVLWWSSGRHDKLVSIDE--ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (351)
Q Consensus 111 ~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (351)
+.+.++ .|. .-...+.|++ + .++.+++.+ ..|+.+|+.+++......... ...-..++. .++.|+..
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~----~~fgeGi~~--~~~~ly~l 80 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVPP----PYFGAGIVA--WRDRLIQL 80 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCT----TCCEEEEEE--ETTEEEEE
T ss_pred EEEEEc-CCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCC----CcceeEEEE--eCCEEEEE
Confidence 455555 564 3466899986 3 345555654 489999999876544432221 001123333 34555554
Q ss_pred -ecCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC--C---CceeEEE
Q 018697 187 -TCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH--T---HWTWAVC 259 (351)
Q Consensus 187 -~~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~---~~v~~~~ 259 (351)
-.++.+.+||..+.+.+.++..+. -..++ +++..+++ +..++.|.++|..+ .+.+.++... . ..++.+.
T Consensus 81 tw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~v-Sdgs~~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYM-SDGTAVIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp ESSSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEE-ECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEE
T ss_pred EeeCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEE-ECCCCeEEEEeCCC-CeEEEEEEEccCCcccccceeeE
Confidence 468999999999998888887544 33444 45664555 45588999999987 4456665532 2 2456667
Q ss_pred ecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc-------------ccceEEEEEeCCCC
Q 018697 260 CNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD-------------YEDSVYGLAWSSRE 326 (351)
Q Consensus 260 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~ 326 (351)
|. +| .+++..-.+..|.+.|..+ ++.+..+.- .....++|+++|++
T Consensus 157 ~~-~G-~lyanvw~s~~I~vIDp~t-------------------G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 157 WV-NG-ELLANVWLTSRIARIDPAS-------------------GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp EE-TT-EEEEEETTTTEEEEECTTT-------------------CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred Ee-CC-EEEEEECCCCeEEEEECCC-------------------CCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence 66 55 5555555677999999998 555544421 12357899999988
Q ss_pred CceEEEeee
Q 018697 327 PWIFASLSY 335 (351)
Q Consensus 327 ~~~l~s~~~ 335 (351)
..++++|-.
T Consensus 216 ~~lfVTGK~ 224 (243)
T 3mbr_X 216 DRLFVTGKR 224 (243)
T ss_dssp TEEEEEETT
T ss_pred CEEEEECCC
Confidence 867777753
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.87 E-value=5.4e-06 Score=69.05 Aligned_cols=225 Identities=8% Similarity=-0.033 Sum_probs=130.0
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCC--
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE-- 143 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~-- 143 (351)
.....++|.+++..+++ ...++.|..|+.. . .....+ .....+..+++.++++ ++++.....
T Consensus 32 ~~pegia~~~~g~lyv~----d~~~~~I~~~d~~---------g-~~~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~ 95 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVT----NHEVGEIVSITPD---------G-NQQIHA-TVEGKVSGLAFTSNGD-LVATGWNADSI 95 (306)
T ss_dssp CCEEEEEECTTSCEEEE----ETTTTEEEEECTT---------C-CEEEEE-ECSSEEEEEEECTTSC-EEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEE----eCCCCeEEEECCC---------C-ceEEEE-eCCCCceeEEEcCCCc-EEEEeccCCcc
Confidence 46678999998874444 2467788888865 1 222222 2235688999999998 444443322
Q ss_pred cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCc-Cce--------eecce---e
Q 018697 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK-TNS--------IEHAH---V 211 (351)
Q Consensus 144 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~--------~~~~~---v 211 (351)
.|..++..++.. ..+.... . ......++..+++..+++-..++.|+++|...++. +.. ..... .
T Consensus 96 ~v~~~d~~~g~~-~~~~~~~--~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 96 PVVSLVKSDGTV-ETLLTLP--D-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp EEEEEECTTSCE-EEEEECT--T-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred eEEEEcCCCCeE-EEEEeCC--C-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 466667655432 1111111 1 11234445444443333333578899998764311 100 00011 5
Q ss_pred EEEEcCCCCCcEEEEecCCCeEEEEecccCCc--ceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCC
Q 018697 212 RNVDYDTKKKHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDE 289 (351)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 289 (351)
+.+ +|++++++++-...+.|..||+...+. ....+.. ......++++++| .++++....+.|.++|..
T Consensus 172 ngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~------ 241 (306)
T 2p4o_A 172 NGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEG-NLYGATHIYNSVVRIAPD------ 241 (306)
T ss_dssp EEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTC-CEEEECBTTCCEEEECTT------
T ss_pred CCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCC-CEEEEeCCCCeEEEECCC------
Confidence 555 788876777777888999999864121 1122211 1345778999999 787777778889999864
Q ss_pred CCCcccccCCccccccc--ceeeccccceEEEEEeC---CCCCceEEEee
Q 018697 290 LPSESLVESPNQRANSL--LNSYSDYEDSVYGLAWS---SREPWIFASLS 334 (351)
Q Consensus 290 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~---~~~~~~l~s~~ 334 (351)
++. +..+......+++++|. |++..++++..
T Consensus 242 --------------G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 242 --------------RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp --------------CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred --------------CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 232 22232222457899998 88775555544
No 247
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.87 E-value=7.1e-06 Score=69.63 Aligned_cols=234 Identities=9% Similarity=-0.008 Sum_probs=138.0
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v 145 (351)
+...|.+..+ ...|+.+ ....|+..++. .... ..+......+..++|.+....++++-...+.|
T Consensus 34 d~~~C~~~~~-~~~ll~~-----~~~~I~~i~~~---------g~~~-~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I 97 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFA-----NRIDIRQVLPH---------RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRI 97 (349)
T ss_dssp TSSCEEESSS-CCEEEEE-----CBSCEEEECTT---------SCCE-EEEECSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCccccccc-CceeEee-----cccceEEEeCC---------CCee-EEeecCCCceEEEEEeccccEEEEEeccCCce
Confidence 3445555555 3455543 34457777665 2122 22222334578999998777545554667899
Q ss_pred EEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEe-ecCCeEEEEEcccCCcCceeecc-e-eEEEEcCCCCCc
Q 018697 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKH 222 (351)
Q Consensus 146 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~~~ 222 (351)
..++++... ...+.... .....++++.+.+..|+.+ ...+.|.+.++........+... . ...++++|.+..
T Consensus 98 ~r~~~~g~~-~~~~~~~~----~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 98 LRANLNGSN-VEEVVSTG----LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp EEEETTSCS-CEEEECSS----CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTE
T ss_pred EEEecCCCC-ceEEEeCC----CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCe
Confidence 999987533 22221111 1246788898766666555 45689999998754332222212 2 889999997765
Q ss_pred EEEEecCC-CeEEEEecccCCcceeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCc
Q 018697 223 LLVTAADE-SGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN 300 (351)
Q Consensus 223 ~l~~~~~d-g~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (351)
++++-..+ +.|..+++.. .....+ ...-...+.|+++|++..+.++-...+.|..+|+..
T Consensus 173 ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG---------------- 234 (349)
T 3v64_C 173 IYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG---------------- 234 (349)
T ss_dssp EEEEECSSSCEEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS----------------
T ss_pred EEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC----------------
Confidence 66666665 8899998874 223333 223345789999987745666666678899999864
Q ss_pred ccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEee
Q 018697 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVES 343 (351)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~ 343 (351)
......+........++++. .+. ++.+-...+.|..++
T Consensus 235 ---~~~~~~~~~~~~~P~giav~-~~~-ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 235 ---SHRKAVISQGLPHPFAITVF-EDS-LYWTDWHTKSINSAN 272 (349)
T ss_dssp ---CSCEEEECSSCSSEEEEEEE-TTE-EEEEETTTTEEEEEE
T ss_pred ---CceEEEEeCCCCCceEEEEE-CCE-EEEecCCCCeEEEEE
Confidence 11111111112234566663 333 566665666676665
No 248
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.84 E-value=5.2e-06 Score=78.04 Aligned_cols=197 Identities=11% Similarity=0.168 Sum_probs=111.5
Q ss_pred ceeeeeeC-CCCCceEEEEeecCCc-ceEEEEEcccccCCCCCCcc-eeee-eeeccccceeEEEecCCCCCcEEEEecC
Q 018697 67 EIWDLSSC-PFDQRIFSTVFSTGES-YGAAIWQIPELYGQLNSPQL-ERIA-ALDAHVGKINCVLWWSSGRHDKLVSIDE 142 (351)
Q Consensus 67 ~v~~i~~~-~~~~~l~~~~~~~~~d-~~i~vw~~~~~~~~~~~~~~-~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~~d 142 (351)
.+...+|| |||+.|+.+...+|.+ ..|+++|+.. + +.+. .+. .....+.|+||++.++++...+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~---------g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISD---------PSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTC---------TTCCCCCCEE---EECSCCEECSSTTEEEEEEECT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCC---------CCEeCCcccc---CceeeEEEecCCCEEEEEEECC
Confidence 67889999 9999888765433333 4699999872 2 2111 111 1234688999998644444321
Q ss_pred ----CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee---cCCeEEEEEcccCC-cC--ceeecce--
Q 018697 143 ----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT---CESSVQFWDLRSMG-KT--NSIEHAH-- 210 (351)
Q Consensus 143 ----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~-~~--~~~~~~~-- 210 (351)
..|+++++.++.......... ........+.|+||+++|+..+ ....|+++|+.++. .. ..+....
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~ 320 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEE--HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG 320 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEEC--CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT
T ss_pred CCCCCEEEEEECCCCchhcEEEEec--CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC
Confidence 357888887643221222111 1112456789999999988765 34578889988753 12 2222111
Q ss_pred -eEEEEcCCCCCcEEEEecCC----CeEEEEecccCCcceeE-eeCCCC--ceeEEEecCCCCCeEEEeeCCCeEEEEE
Q 018697 211 -VRNVDYDTKKKHLLVTAADE----SGIHLWDLRMLKAPIQE-LPGHTH--WTWAVCCNPEYDGFILSAGTDSTVNLWL 281 (351)
Q Consensus 211 -v~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~i~iwd 281 (351)
..++.|+. +..+++....+ ..|..+|+... ..... +..+.. .+..+.+. +..++++...++..++|-
T Consensus 321 ~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 321 VRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp CCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEE
T ss_pred ceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEE
Confidence 45555544 44355555443 35666676532 12233 333443 34455554 436777778888655543
No 249
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.84 E-value=1.2e-06 Score=75.23 Aligned_cols=222 Identities=10% Similarity=-0.007 Sum_probs=128.1
Q ss_pred CCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccce-----eEEEecCCCCCcEEEEecCCcEEEEEcC
Q 018697 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI-----NCVLWWSSGRHDKLVSIDEENIFLWSLD 151 (351)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~~~~~~~~d~~v~iwd~~ 151 (351)
+..+++. ..++.|..+|.. +++.+-......... ...... ++. ++++..++.+..+|..
T Consensus 143 ~~~v~v~----~~~g~l~~~d~~---------tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~--v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 143 DGLVLIH----TSNGQLQALNEA---------DGAVKWTVNLDMPSLSLRGESAPTTA-FGA--AVVGGDNGRVSAVLME 206 (376)
T ss_dssp TTEEEEE----CTTSEEEEEETT---------TCCEEEEEECCC-----CCCCCCEEE-TTE--EEECCTTTEEEEEETT
T ss_pred CCEEEEE----cCCCeEEEEECC---------CCcEEEEEeCCCCceeecCCCCcEEE-CCE--EEEEcCCCEEEEEECC
Confidence 3455553 578889999986 444444433221110 111111 333 6666778999999998
Q ss_pred CCCCCcccccccccCcc--cceeeeEECC--CCCcEEEeecCCeEEEEEcccCCcCceeecceeEEEEcCCCCCcEEEEe
Q 018697 152 CSNKNAQVQSKQSSGML--HYLSGGAWDP--HDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTA 227 (351)
Q Consensus 152 ~~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 227 (351)
+++...........+.. ..+..+.-.| .+..+++++.++.+..+|.++++............+... +. .++.+
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~--~~-~l~~~ 283 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVD--GN-RIYLV 283 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEE--TT-EEEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEE--CC-EEEEE
Confidence 76554433221100000 0000011111 246677888899999999999987766553334444443 33 56667
Q ss_pred cCCCeEEEEecccCCcceeEeeC-CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccccc
Q 018697 228 ADESGIHLWDLRMLKAPIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL 306 (351)
Q Consensus 228 ~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (351)
+.++.|..+|.++ ++.+..... ....+..+... + ..|+.++.+|.|.++|..+ ++.
T Consensus 284 ~~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~~--~-~~l~v~~~~g~l~~~d~~t-------------------G~~ 340 (376)
T 3q7m_A 284 DQNDRVMALTIDG-GVTLWTQSDLLHRLLTSPVLY--N-GNLVVGDSEGYLHWINVED-------------------GRF 340 (376)
T ss_dssp ETTCCEEEEETTT-CCEEEEECTTTTSCCCCCEEE--T-TEEEEECTTSEEEEEETTT-------------------CCE
T ss_pred cCCCeEEEEECCC-CcEEEeecccCCCcccCCEEE--C-CEEEEEeCCCeEEEEECCC-------------------CcE
Confidence 8889999999987 555555442 22223333332 3 5788888899999999998 676
Q ss_pred ceeeccccceEEE-EEeCCCCCceEEEeeeCCeEEEee
Q 018697 307 LNSYSDYEDSVYG-LAWSSREPWIFASLSYDGRVVVES 343 (351)
Q Consensus 307 ~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~dg~v~vw~ 343 (351)
+.........+.. ... .+ . .|..++.+|.|+.|+
T Consensus 341 ~~~~~~~~~~~~~~~~~-~~-~-~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 341 VAQQKVDSSGFQTEPVA-AD-G-KLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEECCTTCBCSCCEE-ET-T-EEEEEBTTSCEEEEE
T ss_pred EEEEecCCCcceeCCEE-EC-C-EEEEEeCCCEEEEEe
Confidence 6655442222322 222 23 3 577788899999886
No 250
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.84 E-value=3.3e-07 Score=85.11 Aligned_cols=230 Identities=10% Similarity=0.056 Sum_probs=138.2
Q ss_pred CCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecc--ccceeEEEecC---CCCCcEEEEe------cCCcE
Q 018697 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH--VGKINCVLWWS---SGRHDKLVSI------DEENI 145 (351)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~---~~~~~~~~~~------~d~~v 145 (351)
+..+++. +.|+.|..+|.. +++.+-.+... ......+..+| ++. ++++. .++.|
T Consensus 121 ~g~v~v~----~~dg~l~AlDa~---------TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~--v~vg~~~~~~~~~g~v 185 (689)
T 1yiq_A 121 KGKVYVG----VLDGRLEAIDAK---------TGQRAWSVDTRADHKRSYTITGAPRVVNGK--VVIGNGGAEFGVRGYV 185 (689)
T ss_dssp TTEEEEE----CTTSEEEEEETT---------TCCEEEEEECCSCTTSCCBCCSCCEEETTE--EEECCBCTTTCCBCEE
T ss_pred CCEEEEE----ccCCEEEEEECC---------CCCEeeeecCcCCCCCCccccCCcEEECCE--EEEEeCCCccCCCCEE
Confidence 4566664 578999999987 45554443321 11111111122 343 44442 26899
Q ss_pred EEEEcCCCCCCccccccccc--------------------------CcccceeeeEECCCCCcEEEeecCC---------
Q 018697 146 FLWSLDCSNKNAQVQSKQSS--------------------------GMLHYLSGGAWDPHDVNAVAATCES--------- 190 (351)
Q Consensus 146 ~iwd~~~~~~~~~~~~~~~~--------------------------~~~~~v~~~~~~~~~~~l~~~~~d~--------- 190 (351)
+.||..+++........... +.......++++|+...+++++.++
T Consensus 186 ~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~ 265 (689)
T 1yiq_A 186 TAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRS 265 (689)
T ss_dssp EEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHH
T ss_pred EEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCC
Confidence 99999987765443321000 0001113568888888888887765
Q ss_pred ----------eEEEEEcccCCcCceeecce-------------eEEEEcCCCCC--cEEEEecCCCeEEEEecccCCcce
Q 018697 191 ----------SVQFWDLRSMGKTNSIEHAH-------------VRNVDYDTKKK--HLLVTAADESGIHLWDLRMLKAPI 245 (351)
Q Consensus 191 ----------~i~iwd~~~~~~~~~~~~~~-------------v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~ 245 (351)
.|..+|.++++.+..++..+ +..+.+ +|+ ..++.++.+|.++++|.++ ++++
T Consensus 266 ~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~--~G~~~~~v~~~~~~G~l~~lD~~t-G~~l 342 (689)
T 1yiq_A 266 QAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI--DGKPRKVLMQAPKNGFFYVIDRAT-GELL 342 (689)
T ss_dssp TTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--TTEEEEEEEECCTTSEEEEEETTT-CCEE
T ss_pred CCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc--CCcEEEEEEEECCCCeEEEEECCC-CCEe
Confidence 39999999999887765321 112222 332 2678899999999999987 5555
Q ss_pred eEeeCCC-Cc--------------------------------------eeEEEecCCCCCeEEEeeC-------------
Q 018697 246 QELPGHT-HW--------------------------------------TWAVCCNPEYDGFILSAGT------------- 273 (351)
Q Consensus 246 ~~~~~~~-~~--------------------------------------v~~~~~~~~~~~~l~s~~~------------- 273 (351)
....... .+ -..++++|+. .++++...
T Consensus 343 ~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~-~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 343 SAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT-GLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT-TEEEEEEEECCEEEECCSSCC
T ss_pred ccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC-CEEEEeccccceeeeeccccc
Confidence 3222100 00 0126788887 66666533
Q ss_pred --------------------------------CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEE
Q 018697 274 --------------------------------DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLA 321 (351)
Q Consensus 274 --------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 321 (351)
+|.|..||+.+ ++.+..+..+.. +..-.
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-------------------G~~~W~~~~~~~-~~~g~ 481 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-------------------QQAAWEVPYVTI-FNGGT 481 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT-------------------TEEEEEEEESSS-CCCCE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC-------------------CCeEeEccCCCC-ccCcc
Confidence 25677777766 666666654432 33334
Q ss_pred eCCCCCceEEEeeeCCeEEEeecCc
Q 018697 322 WSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 322 ~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+...+. +++.++.||.|+.||.++
T Consensus 482 ~~tagg-lvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 482 LSTAGN-LVFEGSADGRVIAYAADT 505 (689)
T ss_dssp EEETTT-EEEEECTTSEEEEEETTT
T ss_pred ceECCC-EEEEECCCCcEEEEECCC
Confidence 555666 788899999999999875
No 251
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.83 E-value=1.3e-05 Score=68.05 Aligned_cols=201 Identities=9% Similarity=-0.054 Sum_probs=126.5
Q ss_pred CCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCC
Q 018697 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE 143 (351)
Q Consensus 64 h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~ 143 (351)
....+..++|.+.+..|+.+ ....+.|..+++.. ......+.........+++.+.+..++++-...+
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~---D~~~~~I~r~~~~g---------~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~ 138 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWS---DVTLDRILRANLNG---------SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS 138 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEE---ETTTTEEEEEETTS---------CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEEeccccEEEEE---eccCCceEEEecCC---------CCceEEEeCCCCCccEEEEecCCCeEEEEcCCCC
Confidence 34557899999887777765 35667888888762 1222222222344578889887665455556678
Q ss_pred cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee-cC-CeEEEEEcccCCcCceeec-ce-eEEEEcCCC
Q 018697 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CE-SSVQFWDLRSMGKTNSIEH-AH-VRNVDYDTK 219 (351)
Q Consensus 144 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~-~~-v~~~~~~~~ 219 (351)
.|.+.+++... ...+.. . ......+++++|.+..|+.+. .. +.|..+++........+.. .. ...++++|+
T Consensus 139 ~I~~~~~dG~~-~~~l~~-~---~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~ 213 (349)
T 3v64_C 139 RIEVANLDGAH-RKVLLW-Q---SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYA 213 (349)
T ss_dssp EEEEEETTSCS-CEEEEC-T---TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETT
T ss_pred eEEEEcCCCCc-eEEEEe-C---CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCC
Confidence 99999987432 222211 1 122578999999777777664 34 7888888774332222221 12 889999987
Q ss_pred CCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 220 KKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
+..++++-...+.|..+|+.. ......+.........+++ ..+ .++++-...+.|..++...
T Consensus 214 ~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~giav-~~~-~ly~td~~~~~V~~~~~~~ 275 (349)
T 3v64_C 214 GRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FED-SLYWTDWHTKSINSANKFT 275 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEE-ETT-EEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEECCCCEEEEEeCCC-CceEEEEeCCCCCceEEEE-ECC-EEEEecCCCCeEEEEEccC
Confidence 775777767778999999874 3222223333445677777 344 6666766778888887544
No 252
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.83 E-value=4.8e-06 Score=71.75 Aligned_cols=231 Identities=9% Similarity=-0.010 Sum_probs=137.0
Q ss_pred eeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEE
Q 018697 69 WDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLW 148 (351)
Q Consensus 69 ~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iw 148 (351)
.+.+..+ ...|+.+ ....|+..++. .... ..+......+..++|.+.+..++++-...+.|..+
T Consensus 80 ~C~~~~~-~~~l~~~-----~~~~I~~i~~~---------~~~~-~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~ 143 (386)
T 3v65_B 80 SCKALGP-EPVLLFA-----NRIDIRQVLPH---------RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRA 143 (386)
T ss_dssp CEEECSS-CCEEEEE-----CBSCEEEECTT---------SCCC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eECCccc-cceeEee-----cCccceeeccC---------CCcE-EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEE
Confidence 3444444 3455543 34567777765 2122 22223334578999998777545554667899999
Q ss_pred EcCCCCCCcccccccccCcccceeeeEECCCCCcEEEe-ecCCeEEEEEcccCCcCceeecc-e-eEEEEcCCCCCcEEE
Q 018697 149 SLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLV 225 (351)
Q Consensus 149 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~ 225 (351)
+++... ...+.... ......+++.+.+..|+.+ ...+.|.+.++........+... . ...++++|.+.++++
T Consensus 144 ~~~g~~-~~~~~~~~----~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~ 218 (386)
T 3v65_B 144 NLNGSN-VEEVVSTG----LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYW 218 (386)
T ss_dssp ETTSCC-EEEEECSS----CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred ecCCCC-cEEEEeCC----CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEE
Confidence 987532 11221111 1245778888766666655 45678888888754332222222 2 889999998775666
Q ss_pred EecCC-CeEEEEecccCCcceeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccc
Q 018697 226 TAADE-SGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRA 303 (351)
Q Consensus 226 ~~~~d-g~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (351)
+-... +.|..+++.. . ....+ ...-...+.|+++|++..++++-+..+.|..+|+..
T Consensus 219 td~~~~~~I~r~~~dG-~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG------------------- 277 (386)
T 3v65_B 219 TDWGNTPRIEASSMDG-S-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG------------------- 277 (386)
T ss_dssp EECSSSCEEEEEETTS-C-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS-------------------
T ss_pred eccCCCCEEEEEeCCC-C-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC-------------------
Confidence 65555 7899988874 2 23333 233455789999987745666666678899998764
Q ss_pred cccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEee
Q 018697 304 NSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVES 343 (351)
Q Consensus 304 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~ 343 (351)
......+........++++. .+. ++.+....+.|..++
T Consensus 278 ~~~~~~~~~~~~~P~giav~-~~~-ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 278 SHRKAVISQGLPHPFAITVF-EDS-LYWTDWHTKSINSAN 315 (386)
T ss_dssp CSCEEEECSSCSSEEEEEEE-TTE-EEEEETTTTEEEEEE
T ss_pred CeeEEEEECCCCCceEEEEE-CCE-EEEeeCCCCeEEEEE
Confidence 11111122122335667773 333 666666677777776
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.82 E-value=5.3e-06 Score=71.49 Aligned_cols=200 Identities=10% Similarity=-0.053 Sum_probs=126.2
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCc
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~ 144 (351)
...+..++|.+.+..|+.+ ....+.|..+++. .......+.........+++.+.+..++++-...+.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~---D~~~~~I~r~~~~---------g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~ 182 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWS---DVTLDRILRANLN---------GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSR 182 (386)
T ss_dssp CSCEEEEEEETTTTEEEEE---ETTTTEEEEEETT---------SCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTE
T ss_pred CCccEEEEEecCCCeEEEE---eCCCCcEEEEecC---------CCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCe
Confidence 4567899999877777765 3566788888876 222222222223345678888876654555566778
Q ss_pred EEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee-cC-CeEEEEEcccCCcCceeecc-e-eEEEEcCCCC
Q 018697 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CE-SSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKK 220 (351)
Q Consensus 145 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~ 220 (351)
|.+.+++... ...+... ......+++++|.+..|+.+. .. +.|..+++............ . ...++++|++
T Consensus 183 I~~~~~dg~~--~~~l~~~---~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~ 257 (386)
T 3v65_B 183 IEVANLDGAH--RKVLLWQ---SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG 257 (386)
T ss_dssp EEECBTTSCS--CEEEECS---SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGG
T ss_pred EEEEeCCCCc--eEEeecC---CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCC
Confidence 8888887422 2222111 123578899999887777665 33 68888887643322222211 2 8899999877
Q ss_pred CcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 221 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
..++++-...+.|..+|+.. ......+.........|++ ..+ .++.+....+.|..++...
T Consensus 258 ~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~giav-~~~-~ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 258 RRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FED-SLYWTDWHTKSINSANKFT 318 (386)
T ss_dssp TEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEEEEE-ETT-EEEEEETTTTEEEEEETTT
T ss_pred CEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceEEEE-ECC-EEEEeeCCCCeEEEEECCC
Confidence 75777777788999999874 3222223333445677887 344 6677777788888888544
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.81 E-value=7.7e-08 Score=80.99 Aligned_cols=165 Identities=4% Similarity=-0.108 Sum_probs=100.8
Q ss_pred CCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCc
Q 018697 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (351)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 167 (351)
+.++.|..|| . +++.......+...+.++...+++. +.+++.+ |..+|. ++..........
T Consensus 37 t~~~~l~~~d-~---------~g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~--l~~~d~-~g~~~~~~~~~~---- 97 (330)
T 3hxj_A 37 SSNKNLYAIN-T---------DGSVKWFFKSGEIIECRPSIGKDGT--IYFGSDK--VYAINP-DGTEKWRFDTKK---- 97 (330)
T ss_dssp STTTTTEEEC-T---------TSCEEESSCGGGEEEECCEETTTTE--ECCSSCE--EEEECC-CGGGGGGSCC------
T ss_pred cCCCEEEEEC-C---------CCcEEEEEecCCCcccceEEecCCc--EEEecCc--EEEECC-CCcEEEEEECCC----
Confidence 4677888888 5 3444444444444566777777776 5555433 877875 333222211111
Q ss_pred ccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce--eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcce
Q 018697 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI 245 (351)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 245 (351)
......... +..+.+++.++.|..+|.. ++......... +.++...+++. +..++.++.|..+|.. ++.+
T Consensus 98 -~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~--g~~~ 169 (330)
T 3hxj_A 98 -AIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD--GTEK 169 (330)
T ss_dssp ----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT--SCEE
T ss_pred -CcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC--CCEe
Confidence 112222233 4567788888999999988 66655554333 66677777775 5557788999999987 4455
Q ss_pred eEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 246 QELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 246 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
..+......+.++...+++ .+++. + +.|..+| ..
T Consensus 170 ~~~~~~~~~~~~~~~d~~g-~l~v~-t--~~l~~~d-~~ 203 (330)
T 3hxj_A 170 WRFKTNDAITSAASIGKDG-TIYFG-S--DKVYAIN-PD 203 (330)
T ss_dssp EEEECSSCCCSCCEECTTC-CEEEE-S--SSEEEEC-TT
T ss_pred EEEecCCCceeeeEEcCCC-EEEEE-e--CEEEEEC-CC
Confidence 5555555667778887777 54443 3 7788888 44
No 255
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.78 E-value=2e-06 Score=80.83 Aligned_cols=193 Identities=10% Similarity=-0.001 Sum_probs=112.8
Q ss_pred ceeEEEec-CCCCCcEEEEecCC----cEEEEEcCCC-CCCcccccccccCcccceeeeEECCCCCcEEEeecC-----C
Q 018697 122 KINCVLWW-SSGRHDKLVSIDEE----NIFLWSLDCS-NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----S 190 (351)
Q Consensus 122 ~v~~~~~~-~~~~~~~~~~~~d~----~v~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~ 190 (351)
.+...+|| |||+.++++...+| +|+++|+.++ ......+ .....+++|+||++.|+....+ .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~-------~~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV-------SGTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE-------EEECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc-------cCceeeEEEecCCCEEEEEEECCCCCCC
Confidence 67889999 99996444444333 4999999976 4221111 1134578999999988877654 3
Q ss_pred eEEEEEcccCCcC--ceeecc--e-eEEEEcCCCCCcEEEEecC--CCeEEEEecccCCcce--eEee-CCCCceeEEEe
Q 018697 191 SVQFWDLRSMGKT--NSIEHA--H-VRNVDYDTKKKHLLVTAAD--ESGIHLWDLRMLKAPI--QELP-GHTHWTWAVCC 260 (351)
Q Consensus 191 ~i~iwd~~~~~~~--~~~~~~--~-v~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~--~~~~-~~~~~v~~~~~ 260 (351)
.|+++++.+++.. ..+... . ...+.|+|+|++++++... ...|+++|+....... ..+. ........+.|
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 6888888776432 222212 2 6688999999965555433 3468888887632122 3333 23345555655
Q ss_pred cCCCCCeEEEeeCC--C--eEEEEEcCCCCCCCCCCcccccCCccccccccee-eccccc--eEEEEEeCCCCCceEEEe
Q 018697 261 NPEYDGFILSAGTD--S--TVNLWLVSTSNHDELPSESLVESPNQRANSLLNS-YSDYED--SVYGLAWSSREPWIFASL 333 (351)
Q Consensus 261 ~~~~~~~l~s~~~d--g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~l~s~ 333 (351)
+..+ .+++....+ + .|..+|+.. ...... +..+.. .+..+.+. +..++++.
T Consensus 328 ~~g~-~l~~~t~~~~a~~~~L~~~d~~~-------------------~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~ 385 (751)
T 2xe4_A 328 HGTS-HLVILTNEGGAVNHKLLIAPRGQ-------------------PSDWSHVLVDHSEDVFMESIAVR--SNYLVVAG 385 (751)
T ss_dssp ETTT-EEEEEECTTTCTTCEEEEEETTS-------------------TTCCCCEEECCCSSEEEEEEEEC--SSEEEEEE
T ss_pred eeCC-EEEEEeCCCCCCCcEEEEEcCCC-------------------cccceeeEECCCCCcEEEEEEEE--CCEEEEEE
Confidence 4443 555555544 3 455556543 111111 212222 45566665 44477888
Q ss_pred eeCCeEEEee
Q 018697 334 SYDGRVVVES 343 (351)
Q Consensus 334 ~~dg~v~vw~ 343 (351)
..++..++|-
T Consensus 386 ~~~g~~~l~~ 395 (751)
T 2xe4_A 386 RRAGLTRIWT 395 (751)
T ss_dssp EETTEEEEEE
T ss_pred EeCCEEEEEE
Confidence 8888755553
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=5.2e-06 Score=72.54 Aligned_cols=254 Identities=9% Similarity=0.063 Sum_probs=135.7
Q ss_pred ceeeeeeCC-CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCC--
Q 018697 67 EIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE-- 143 (351)
Q Consensus 67 ~v~~i~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~-- 143 (351)
....++++| ++..|+++- ..+.|+.+++. ... +..+.........++|+++++.++++...++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d----~~~~I~~id~~---------~~~-v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~ 203 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVG----EQHPTRLIDFE---------KEY-VSTVYSGLSKVRTICWTHEADSMIITNDQNNND 203 (430)
T ss_dssp CCCEEEEETTEEEEEEEEE----BTEEEEEEETT---------TTE-EEEEECCCSCEEEEEECTTSSEEEEEECCSCTT
T ss_pred CCCEEEECCCCCCeEEEEe----CCCcEEEEECC---------CCE-EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcc
Confidence 446788888 456666652 22788888876 222 3333334556889999999986455544222
Q ss_pred --cEEEEEcCCCCCC-cccccccccCcccceeeeEECCCCCcEEEe-ecCCeEEEEEcccCCcCceeec--ce-eEEEEc
Q 018697 144 --NIFLWSLDCSNKN-AQVQSKQSSGMLHYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSIEH--AH-VRNVDY 216 (351)
Q Consensus 144 --~v~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~--~~-v~~~~~ 216 (351)
.+.+++... ... ...+. . .....+++++|++..|+++ ..++.|..+|...+........ .. ...++|
T Consensus 204 ~~~v~~~~~~g-~~~~~~~l~-~----~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~ 277 (430)
T 3tc9_A 204 RPNNYILTRES-GFKVITELT-K----GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQF 277 (430)
T ss_dssp SEEEEEEEGGG-TSCSEEEEE-E----CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEE
T ss_pred cceEEEEeCCC-ceeeeeeec-c----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEE
Confidence 234444332 211 11111 1 1246788999944445544 4678999999886543222221 12 789999
Q ss_pred CCCCCcEEEEecCCCeEEEEecccCCcc---eeEeeCC---------------CCcee-EEEec--------CCCCCeEE
Q 018697 217 DTKKKHLLVTAADESGIHLWDLRMLKAP---IQELPGH---------------THWTW-AVCCN--------PEYDGFIL 269 (351)
Q Consensus 217 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~---------------~~~v~-~~~~~--------~~~~~~l~ 269 (351)
+|++++++++-...+.|..++....... ...+.+. -.... .++.. +++ .+++
T Consensus 278 ~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyv 356 (430)
T 3tc9_A 278 HPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYF 356 (430)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEE
T ss_pred cCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEE
Confidence 9999866676677889999887632111 1222211 01112 34442 335 5555
Q ss_pred EeeCCCeEEEEEcCCCCCCCCCCccc-ccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 270 SAGTDSTVNLWLVSTSNHDELPSESL-VESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 270 s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+-...+.|+.++..- .- ....... ........+... ....-.....|+++|++..++++-.....|+.++++
T Consensus 357 aD~~n~~I~~i~~~G-~v-~~~~g~g~~~~~G~~dG~~~--~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 357 CDRENHCIRILTPQG-RV-TTFAGRGSNGTSGYNDGDLR--QEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEGGGTEEEEECTTS-EE-EEEEECCTTSSSSCBCEETT--TTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECCCcEEEEECCCC-cE-EEEEeCCCCCCCcccCCCch--hhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 555667788877321 00 0000000 000000000000 000012468999999533377777778889988865
No 257
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.75 E-value=9.1e-06 Score=69.74 Aligned_cols=223 Identities=11% Similarity=-0.043 Sum_probs=127.7
Q ss_pred CCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCC
Q 018697 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN 156 (351)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~ 156 (351)
+..++++ +.++.|..+|.. +++.+-.............. .++. +++++.++.|..+|..+++..
T Consensus 103 ~~~v~v~----~~~g~l~a~d~~---------tG~~~W~~~~~~~~~~~p~~-~~~~--v~v~~~~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 103 GGHVYIG----SEKAQVYALNTS---------DGTVAWQTKVAGEALSRPVV-SDGL--VLIHTSNGQLQALNEADGAVK 166 (376)
T ss_dssp TTEEEEE----ETTSEEEEEETT---------TCCEEEEEECSSCCCSCCEE-ETTE--EEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEE----cCCCEEEEEECC---------CCCEEEEEeCCCceEcCCEE-ECCE--EEEEcCCCeEEEEECCCCcEE
Confidence 4456554 467889999987 44544444332221111112 2333 667777899999999877654
Q ss_pred cccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---------eEEEEcCC--CCCcEEE
Q 018697 157 AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---------VRNVDYDT--KKKHLLV 225 (351)
Q Consensus 157 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------v~~~~~~~--~~~~~l~ 225 (351)
..................... +..+++++.++.+..+|..+++......... +..+.-.| .+. .++
T Consensus 167 W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~ 243 (376)
T 3q7m_A 167 WTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVF 243 (376)
T ss_dssp EEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETT-EEE
T ss_pred EEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECC-EEE
Confidence 443321100000000111222 4567888889999999999988776655321 00011112 133 567
Q ss_pred EecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccc
Q 018697 226 TAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANS 305 (351)
Q Consensus 226 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (351)
.++.++.+..+|.++ ++.+.... ......+... + ..++.++.++.|..+|..+ ++
T Consensus 244 ~~~~~g~l~~~d~~t-G~~~w~~~--~~~~~~~~~~--~-~~l~~~~~~g~l~~~d~~t-------------------G~ 298 (376)
T 3q7m_A 244 ALAYNGNLTALDLRS-GQIMWKRE--LGSVNDFIVD--G-NRIYLVDQNDRVMALTIDG-------------------GV 298 (376)
T ss_dssp EECTTSCEEEEETTT-CCEEEEEC--CCCEEEEEEE--T-TEEEEEETTCCEEEEETTT-------------------CC
T ss_pred EEecCcEEEEEECCC-CcEEeecc--CCCCCCceEE--C-CEEEEEcCCCeEEEEECCC-------------------Cc
Confidence 778899999999987 55554443 2233444443 4 5677778899999999988 55
Q ss_pred cceeecc-ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 306 LLNSYSD-YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 306 ~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
.+..... ....+...... +. .|+.++.+|.|.++|..+
T Consensus 299 ~~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 299 TLWTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEEEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETTT
T ss_pred EEEeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECCC
Confidence 5544431 11112222222 33 577777888899988764
No 258
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.73 E-value=2.6e-05 Score=62.38 Aligned_cols=205 Identities=12% Similarity=0.117 Sum_probs=130.8
Q ss_pred eeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec-cccceeEEEecCCCCCcEEE
Q 018697 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA-HVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 60 ~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~ 138 (351)
.+.+-.+.+..++|+|++..|+++. ..++.|...|.. ++.+..+.. -....-.|++.+++. ++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~---d~~~~I~~ld~~----------g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTI---NKPAAIVEMTTN----------GDLIRTIPLDFVKDLETIEYIGDNQ-FVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEE---ETTEEEEEEETT----------CCEEEEEECSSCSSEEEEEECSTTE-EEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEE---CCCCeEEEEeCC----------CCEEEEEecCCCCChHHeEEeCCCE-EEEE
Confidence 4556667899999999988888873 456677666654 344444421 124577888888887 2444
Q ss_pred EecCCcEEEEEcCCCCCCcccccc--c--ccCcccceeeeEECCCCCcEEEeecCCeEEEEEccc---CCcCceeec---
Q 018697 139 SIDEENIFLWSLDCSNKNAQVQSK--Q--SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS---MGKTNSIEH--- 208 (351)
Q Consensus 139 ~~~d~~v~iwd~~~~~~~~~~~~~--~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~--- 208 (351)
.-.++.+.++++............ . .........+++|+|.++.|+++.......+|.+.. ...+..+..
T Consensus 87 ~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~ 166 (255)
T 3qqz_A 87 DERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKAL 166 (255)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHH
T ss_pred ECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhh
Confidence 445688999988764431111111 0 112234578999999998888887655555555541 111221211
Q ss_pred ---c---eeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCC---------CceeEEEecCCCCCeEEEeeC
Q 018697 209 ---A---HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT---------HWTWAVCCNPEYDGFILSAGT 273 (351)
Q Consensus 209 ---~---~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~s~~~ 273 (351)
. .+..++++|....+++....+..+..+|.. ++++..+.-.. ...-.|+|.++| +++++ ++
T Consensus 167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G-~lyIv-sE 242 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG-NIYIV-SE 242 (255)
T ss_dssp HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT--CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC-CEEEE-ET
T ss_pred ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC--CCEEEEEEcCCccCCcccccCCCCeeEECCCC-CEEEE-cC
Confidence 0 178999999888788888899999999977 44555544221 256889999999 65554 66
Q ss_pred CCeEEEEEc
Q 018697 274 DSTVNLWLV 282 (351)
Q Consensus 274 dg~i~iwd~ 282 (351)
-+.++.|.-
T Consensus 243 ~n~~y~f~~ 251 (255)
T 3qqz_A 243 PNRFYRFTP 251 (255)
T ss_dssp TTEEEEEEC
T ss_pred CceEEEEEe
Confidence 566555543
No 259
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.73 E-value=3.1e-05 Score=64.70 Aligned_cols=221 Identities=11% Similarity=0.040 Sum_probs=130.6
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCC---CCCccccccccc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCS---NKNAQVQSKQSS 165 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~---~~~~~~~~~~~~ 165 (351)
....|+..++. .......+ .....+..++|.+.+..++++-...+.|..+++... .....+...
T Consensus 8 ~~~~I~~i~~~---------~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~--- 74 (316)
T 1ijq_A 8 NRHEVRKMTLD---------RSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--- 74 (316)
T ss_dssp CBSSEEEEETT---------SCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS---
T ss_pred CCCeEEEEECC---------CcceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC---
Confidence 44568888877 22222222 234567899999987765555566789999998751 111111111
Q ss_pred CcccceeeeEECCCCCcEEEe-ecCCeEEEEEcccCCcCceeecc-e-eEEEEcCCCCCcEEEEecCC-CeEEEEecccC
Q 018697 166 GMLHYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRML 241 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~ 241 (351)
......++++.+.+..|+.+ ...+.|.+.|+........+... . ...++++|.+.+++++.... +.|..+++..
T Consensus 75 -~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG- 152 (316)
T 1ijq_A 75 -DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG- 152 (316)
T ss_dssp -SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-
T ss_pred -CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-
Confidence 11246788888766666655 56789999998754332222211 2 88999999776566655443 7888888763
Q ss_pred CcceeEee-CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEE
Q 018697 242 KAPIQELP-GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (351)
Q Consensus 242 ~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (351)
.....+. ..-...+.++++|++..++++-+..+.|..+|+.... .+.+...........++
T Consensus 153 -~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-----------------~~~~~~~~~~~~~P~gi 214 (316)
T 1ijq_A 153 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-----------------RKTILEDEKRLAHPFSL 214 (316)
T ss_dssp -CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----------------CEEEEECTTTTSSEEEE
T ss_pred -CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-----------------eEEEeecCCccCCcEEE
Confidence 3333332 2345678999998874555666667899999986410 11111111111234567
Q ss_pred EeCCCCCceEEEeeeCCeEEEeec
Q 018697 321 AWSSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 321 ~~~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
++.. +. ++++-...+.|..++.
T Consensus 215 av~~-~~-ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 215 AVFE-DK-VFWTDIINEAIFSANR 236 (316)
T ss_dssp EEET-TE-EEEEETTTTEEEEEET
T ss_pred EEEC-CE-EEEEECCCCeEEEEeC
Confidence 7743 33 6666666777777764
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.69 E-value=6.5e-05 Score=62.74 Aligned_cols=222 Identities=9% Similarity=-0.048 Sum_probs=134.5
Q ss_pred CCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccc
Q 018697 41 ENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120 (351)
Q Consensus 41 ~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~ 120 (351)
.+.|+.+++....-. .+......+..++|.+.+..|+.+ ....+.|..+++..... . ......+...-
T Consensus 9 ~~~I~~i~~~~~~~~----~~~~~~~~p~g~~~d~~~~~ly~~---D~~~~~I~~~~~~g~~~----~-~~~~~~~~~~~ 76 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYT----SLIPNLRNVVALDTEVASNRIYWS---DLSQRMICSTQLDRAHG----V-SSYDTVISRDI 76 (316)
T ss_dssp BSSEEEEETTSCCCE----EEECSCSSEEEEEEETTTTEEEEE---ETTTTEEEEEEC-------------CEEEECSSC
T ss_pred CCeEEEEECCCcceE----ehhcCCCceEEEEEEeCCCEEEEE---ECCCCcEEEEECCCCCC----C-cccEEEEeCCC
Confidence 356777776654321 122334567899999987777776 35667888888762000 0 11111222222
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC--CeEEEEEcc
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE--SSVQFWDLR 198 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~ 198 (351)
.....+++.+.+..++++-...+.|.+.+++.. ....+.. . ......+++++|.+..|+.+... +.|...++.
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~-~~~~~~~-~---~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV-KRKTLFR-E---NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSS-SEEEEEE-C---TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC-ceEEEEE-C---CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 456788888766654555466789999998742 2222221 1 12257899999977777766532 688888876
Q ss_pred cCCcCceeecc--e-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee-C--CCCceeEEEecCCCCCeEEEee
Q 018697 199 SMGKTNSIEHA--H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-G--HTHWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 199 ~~~~~~~~~~~--~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~--~~~~v~~~~~~~~~~~~l~s~~ 272 (351)
. .....+... . ...++++|++..++++-...+.|..+|+.. . ....+. . .......+++. .+ .++++-.
T Consensus 152 G-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~-~~~~~~~~~~~~~~P~giav~-~~-~ly~~d~ 226 (316)
T 1ijq_A 152 G-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSLAVF-ED-KVFWTDI 226 (316)
T ss_dssp S-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-C-SCEEEEECTTTTSSEEEEEEE-TT-EEEEEET
T ss_pred C-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-C-ceEEEeecCCccCCcEEEEEE-CC-EEEEEEC
Confidence 4 333333211 2 889999988775667666778999999874 2 233332 1 22345677775 34 6777777
Q ss_pred CCCeEEEEEcCC
Q 018697 273 TDSTVNLWLVST 284 (351)
Q Consensus 273 ~dg~i~iwd~~~ 284 (351)
..+.|..++..+
T Consensus 227 ~~~~V~~~~~~~ 238 (316)
T 1ijq_A 227 INEAIFSANRLT 238 (316)
T ss_dssp TTTEEEEEETTT
T ss_pred CCCeEEEEeCCC
Confidence 788899888755
No 261
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.69 E-value=2.3e-05 Score=68.51 Aligned_cols=253 Identities=11% Similarity=0.027 Sum_probs=139.1
Q ss_pred ceeeeeeCCC--CCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecC--
Q 018697 67 EIWDLSSCPF--DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE-- 142 (351)
Q Consensus 67 ~v~~i~~~~~--~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d-- 142 (351)
....++|.|+ +..|+.+ ...+.|+.++.. ... +..+.........+++++++. ++++....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~----D~~~~I~~id~~---------~g~-v~~~~~~~~~P~giavd~dG~-lyVad~~~~~ 204 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV----GQRDAFRHVDFV---------NQY-VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSD 204 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE----CBTSCEEEEETT---------TTE-EEEECCCCSCEEEEEECTTCC-EEEEECCSCT
T ss_pred CCceEEEccccCCCEEEEE----eCCCCEEEEECC---------CCE-EEEeecCCCCccEEEECCCCC-EEEEcCCCCc
Confidence 4568889984 4556654 222788888875 223 333333445688999999999 45554321
Q ss_pred -C-cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEe-ecCCeEEEEEcccCCcCcee-ecce---eEEEE
Q 018697 143 -E-NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSI-EHAH---VRNVD 215 (351)
Q Consensus 143 -~-~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~-~~~~---v~~~~ 215 (351)
. .+...+............ .......++++|++..|+++ ..++.|+.+|..++.....+ .... ...++
T Consensus 205 ~~~gv~~~~~~~~~~~~~~~~-----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia 279 (433)
T 4hw6_A 205 TNTGIYLFTRASGFTERLSLC-----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIV 279 (433)
T ss_dssp TSEEEEEECGGGTTCCEEEEE-----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEE
T ss_pred ccceEEEEECCCCeecccccc-----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEE
Confidence 1 233333321111001111 11246778999944445554 46788999998866542222 2111 45799
Q ss_pred cCCCCCcEEEEecCCCeEEEEecccCCcc---eeEeeCC---------------CCceeEEEe---------cCCCCCeE
Q 018697 216 YDTKKKHLLVTAADESGIHLWDLRMLKAP---IQELPGH---------------THWTWAVCC---------NPEYDGFI 268 (351)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~---------------~~~v~~~~~---------~~~~~~~l 268 (351)
|+|+++.++++-...+.|+.+++...... ...+.+. -.....+++ .+++ .++
T Consensus 280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~ly 358 (433)
T 4hw6_A 280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFY 358 (433)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEE
Confidence 99999856666677889999886531111 1122211 123567888 6777 777
Q ss_pred EEeeCCCeEEEEEcCCCCCCCCCCccccc-CCcccccccceeeccccceEEEEEeC-CCCCceEEEeeeCCeEEEeecC
Q 018697 269 LSAGTDSTVNLWLVSTSNHDELPSESLVE-SPNQRANSLLNSYSDYEDSVYGLAWS-SREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 269 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
++-...+.|+.++..- .. ....+.... .+-...+... ....-....+|+++ +++. ++++-...+.|+..+++
T Consensus 359 vaD~~n~~I~~~~~~G-~v-~t~~G~g~~~~~G~~dG~~~--~~~~~~~P~giavd~~~g~-lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 359 FCDRDSHTVRVLTPEG-RV-TTYAGRGNSREWGYVDGELR--SQALFNHPTSIAYDMKRKC-FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEETTTTEEEEECTTS-EE-EEEECCCTTCSSCCBCEETT--TTCBCSSEEEEEEETTTTE-EEEEEGGGTEEEEEEEC
T ss_pred EEECCCCEEEEECCCC-CE-EEEEeCCCCCccccCCCccc--cccEeCCCcEEEEECCCCE-EEEEeCCCCEEEEEecC
Confidence 7777778898887421 00 000000000 0000000000 00011236789999 5665 77777778899988875
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.69 E-value=2.2e-05 Score=62.82 Aligned_cols=201 Identities=7% Similarity=0.048 Sum_probs=123.0
Q ss_pred eeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEE
Q 018697 115 ALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQF 194 (351)
Q Consensus 115 ~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 194 (351)
.+.+-...+..++|+|++..++++...++.|...|.. +.....+... + .....++++.+++.++++.-.++.+.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~---g-~~D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLD---F-VKDLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECS---S-CSSEEEEEECSTTEEEEEETTTTEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecC---C-CCChHHeEEeCCCEEEEEECCCCcEEE
Confidence 3445556799999999887655556667888888887 3322222111 1 135778888888876565556788888
Q ss_pred EEcccCCcC---ceeec-----c-e--eEEEEcCCCCCcEEEEecCCCeEEEEeccc--CCcceeEee-------CCCCc
Q 018697 195 WDLRSMGKT---NSIEH-----A-H--VRNVDYDTKKKHLLVTAADESGIHLWDLRM--LKAPIQELP-------GHTHW 254 (351)
Q Consensus 195 wd~~~~~~~---~~~~~-----~-~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~-------~~~~~ 254 (351)
+++.....+ ..... . . ...++|+|.+.. |+++.+.....+|.++. ....+..+. .+...
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~-L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHT-FWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTE-EEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCE-EEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 887654321 11110 1 1 789999999873 44455444445555431 111222221 12345
Q ss_pred eeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceee--c-cc------cceEEEEEeCCC
Q 018697 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY--S-DY------EDSVYGLAWSSR 325 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~------~~~v~~~~~~~~ 325 (351)
+..++++|...++++.......|..+|... +.+..+ . +. -....+|+|.++
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~g--------------------~~~~~~~L~~g~~~l~~~~~qpEGia~d~~ 234 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLVG--------------------EVIGEMSLTKGSRGLSHNIKQAEGVAMDAS 234 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTC--------------------CEEEEEECSTTGGGCSSCCCSEEEEEECTT
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCCC--------------------CEEEEEEcCCccCCcccccCCCCeeEECCC
Confidence 789999998767777777788899999774 333222 2 11 124578999999
Q ss_pred CCceEEEeeeCCeEEEee
Q 018697 326 EPWIFASLSYDGRVVVES 343 (351)
Q Consensus 326 ~~~~l~s~~~dg~v~vw~ 343 (351)
|. ++++ ++-+.++.+.
T Consensus 235 G~-lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 235 GN-IYIV-SEPNRFYRFT 250 (255)
T ss_dssp CC-EEEE-ETTTEEEEEE
T ss_pred CC-EEEE-cCCceEEEEE
Confidence 98 4544 6666555554
No 263
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.67 E-value=5.9e-05 Score=65.22 Aligned_cols=223 Identities=8% Similarity=-0.044 Sum_probs=135.1
Q ss_pred CCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccc
Q 018697 41 ENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120 (351)
Q Consensus 41 ~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~ 120 (351)
.+.|+.+++...... .+......+..++|.+.+..|+.+ ....+.|..+++..... .......+....
T Consensus 91 ~~~I~~i~l~~~~~~----~~~~~~~~~~~l~~d~~~~~lyws---D~~~~~I~~~~~~g~~~-----~~~~~~~~~~~~ 158 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYT----SLIPNLRNVVALDTEVASNRIYWS---DLSQRMICSTQLDRAHG-----VSSYDTVISRDI 158 (400)
T ss_dssp TTEEEEECTTSCSCE----EEECSCSCEEEEEEETTTTEEEEE---ETTTTEEEEEEC-----------CCCEEEECSSC
T ss_pred cceeEEEccCCccee----EeccccCcceEEeeeeccCceEEE---ecCCCeEEEEEcccCCC-----CCcceEEEeCCC
Confidence 466766666543322 223345678899999987777765 35567888888762000 011222222234
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec--CCeEEEEEcc
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLR 198 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~ 198 (351)
.....+++.+.+..++++-...+.|.+.+++... ...+... ......+++++|.+..|+.+.. .+.|...++.
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~--~~~l~~~---~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLFRE---NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS--EEEEEEC---SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCc--eEEEEeC---CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 4677888988666545555667899999987432 2222111 1225789999998777776652 4788888887
Q ss_pred cCCcCceeecc-e-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-eC--CCCceeEEEecCCCCCeEEEeeC
Q 018697 199 SMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PG--HTHWTWAVCCNPEYDGFILSAGT 273 (351)
Q Consensus 199 ~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~~l~s~~~ 273 (351)
.......+... . ...|++++++..++++-...+.|..+|+.. .. ...+ .. .......+++. .+ .++.+...
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG-~~-~~~~~~~~~~l~~P~gl~v~-~~-~lywtd~~ 309 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GN-RKTILEDEKRLAHPFSLAVF-ED-KVFWTDII 309 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CC-CEEEEECSSTTSSEEEEEEE-TT-EEEEEESS
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC-Cc-cEEEEeCCCCCCCCEEEEEe-CC-EEEEecCC
Confidence 44332222212 2 899999988775666666778999999874 32 2222 22 22344567663 23 56667777
Q ss_pred CCeEEEEEcCC
Q 018697 274 DSTVNLWLVST 284 (351)
Q Consensus 274 dg~i~iwd~~~ 284 (351)
.+.|..+|..+
T Consensus 310 ~~~V~~~~~~~ 320 (400)
T 3p5b_L 310 NEAIFSANRLT 320 (400)
T ss_dssp SCSEEEEESSS
T ss_pred CCeEEEEEcCC
Confidence 78888888655
No 264
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.66 E-value=3.2e-05 Score=64.63 Aligned_cols=221 Identities=8% Similarity=-0.031 Sum_probs=129.7
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 168 (351)
....|+..++... .......+ .....+..++|.+.+..++.+-...+.|..++++.......+.... .
T Consensus 11 ~~~~I~~i~l~~~-------~~~~~~~~-~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~----l 78 (318)
T 3sov_A 11 NRRDLRLVDATNG-------KENATIVV-GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG----L 78 (318)
T ss_dssp CEEEEEEEETTCT-------TSCCEEEE-EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC----C
T ss_pred ccCeEEEEECCCC-------ceEEEEEe-cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC----C
Confidence 4567888888721 10111111 2223567899999766545554667899999987543222222111 1
Q ss_pred cceeeeEECCCCCcEEEe-ecCCeEEEEEcccCCcCceeecc-e-eEEEEcCCCCCcEEEEec-CCCeEEEEecccCCcc
Q 018697 169 HYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLKAP 244 (351)
Q Consensus 169 ~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~ 244 (351)
....++++.+.+..|+.+ ...+.|.++++........+... . ...++++|.+.+++++-. ..+.|..+++.- ..
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--~~ 156 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SS 156 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS--CS
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC--CC
Confidence 256778888766666555 45789999998754322222112 1 889999987664555542 357888888763 22
Q ss_pred eeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeC
Q 018697 245 IQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS 323 (351)
Q Consensus 245 ~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 323 (351)
...+ ...-...+.|+++|++..+.++-+..+.|..+|+.. ...............++++.
T Consensus 157 ~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-------------------~~~~~~~~~~~~~P~glav~ 217 (318)
T 3sov_A 157 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-------------------TNRQAVVKGSLPHPFALTLF 217 (318)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-------------------CSCEEEECSCCSCEEEEEEE
T ss_pred eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-------------------CceEEEecCCCCCceEEEEe
Confidence 3333 223345689999997745666666678999999864 11111111122334566664
Q ss_pred CCCCceEEEeeeCCeEEEeec
Q 018697 324 SREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 324 ~~~~~~l~s~~~dg~v~vw~~ 344 (351)
. + .++.+-...+.|..++.
T Consensus 218 ~-~-~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 218 E-D-ILYWTDWSTHSILACNK 236 (318)
T ss_dssp T-T-EEEEEETTTTEEEEEET
T ss_pred C-C-EEEEEecCCCeEEEEEC
Confidence 3 2 35666656677777765
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.65 E-value=8.4e-05 Score=70.46 Aligned_cols=232 Identities=11% Similarity=0.078 Sum_probs=142.8
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee--------ccccceeEEEecCCCCCcE
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD--------AHVGKINCVLWWSSGRHDK 136 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~~ 136 (351)
...|.++...+++...+.+ .++-+.+|+.. ..+. ..+. .....|.++...++|. +
T Consensus 214 ~~~i~~i~~d~~g~lwigt-----~~~Gl~~~~~~---------~~~~-~~~~~~~~~~~~l~~~~i~~i~~d~~g~--l 276 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVAT-----EGAGLFLINPK---------TKEI-KNYLHSPSNPKSISSNYIRSLAMDSQNR--L 276 (795)
T ss_dssp CCCEEEEEEEETTEEEEEE-----BSSCEEEEETT---------TTEE-EEECCCTTCTTSCSCSBEEEEEECTTSC--E
T ss_pred CCeeEEEEEcCCCCEEEEE-----CCCCeEEEeCC---------CCeE-EEeecCCCCccccCCCeEEEEEEcCCCC--E
Confidence 4567788777766655543 33347788865 2121 1121 1235699999988888 5
Q ss_pred EEEecCCcEEEEEcCCCCCCccccccc---ccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee------
Q 018697 137 LVSIDEENIFLWSLDCSNKNAQVQSKQ---SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE------ 207 (351)
Q Consensus 137 ~~~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------ 207 (351)
.++..+ -|.+|+..+.. ........ ..-....|.++...+++. |-+|+.++.|..|+..+.... .+.
T Consensus 277 Wigt~~-Gl~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~ 352 (795)
T 4a2l_A 277 WIGTFN-DLNIYHEGTDS-FASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFK-NIRNIPYKN 352 (795)
T ss_dssp EEEESS-CEEEEETTTTE-EEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSE-EECCCTTSS
T ss_pred EEEeCC-hhheEcCCCCe-EEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccce-EEcCCCCCC
Confidence 555444 58889876432 11111100 011224789999988776 666777778889987655321 111
Q ss_pred --cce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee---------CCCCceeEEEecCCCCCeEEEeeCCC
Q 018697 208 --HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP---------GHTHWTWAVCCNPEYDGFILSAGTDS 275 (351)
Q Consensus 208 --~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~l~s~~~dg 275 (351)
... |.++...++|. +-.|+.++-|..||..+ .+ ...+. .....|.++...+++ .+|..|+.++
T Consensus 353 ~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~ 427 (795)
T 4a2l_A 353 SLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPIT-QR-FTSYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAG 427 (795)
T ss_dssp SCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTT-CC-EEEECCC------CCSCSCEEEEEEETTT-TEEEEEETTT
T ss_pred CCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCC-Cc-EEEEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcC
Confidence 012 99999999886 45578887899999775 32 33332 123568899888888 6466677777
Q ss_pred eEEEEEcCCCCCCCCCCcccccCCcccccccceeec-----cccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 276 TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-----DYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
-|..||... ++. ..+. .....|.++...++|. +.+.. .+ -|.+|+..
T Consensus 428 Gl~~~d~~~-------------------~~~-~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt-~~-Gl~~~~~~ 479 (795)
T 4a2l_A 428 GLSILHRNS-------------------GQV-ENFNQRNSQLVNENVYAILPDGEGN-LWLGT-LS-ALVRFNPE 479 (795)
T ss_dssp EEEEEETTT-------------------CCE-EEECTTTSCCSCSCEEEEEECSSSC-EEEEE-SS-CEEEEETT
T ss_pred ceeEEeCCC-------------------CcE-EEeecCCCCcCCCeeEEEEECCCCC-EEEEe-cC-ceeEEeCC
Confidence 799999876 221 1111 1234689999888887 55444 34 47777764
No 266
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=4.1e-05 Score=67.26 Aligned_cols=256 Identities=10% Similarity=0.036 Sum_probs=139.9
Q ss_pred ceeeeeeCC-CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee-c---cccceeEEEe-------cCCCCC
Q 018697 67 EIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD-A---HVGKINCVLW-------WSSGRH 134 (351)
Q Consensus 67 ~v~~i~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~-~---h~~~v~~~~~-------~~~~~~ 134 (351)
....|+|.| ++..|+++. ...+.|++.|+. . ..+..+. . .......++| ++++..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~---~~~~~i~~ID~~---------~-~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICY---DGHKAIQLIDLK---------N-RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp SEEEEEEETTEEEEEEEEE---ETEEEEEEEETT---------T-TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCE
T ss_pred CCCEEEEccCCCCEEEEEE---CCCCeEEEEECC---------C-CEEEEEEccCccccCCCcEEEEeecccccCCCCCE
Confidence 356788998 466666653 234567777776 2 2233332 1 1235889999 999986
Q ss_pred cEEEEecCC------cEEEEEcCCCCCCc-----ccccccccCcccceeeeEECCCCCcEEEee-cCCeEEEEEcc----
Q 018697 135 DKLVSIDEE------NIFLWSLDCSNKNA-----QVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLR---- 198 (351)
Q Consensus 135 ~~~~~~~d~------~v~iwd~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~---- 198 (351)
++++...++ .|.+++........ .... . -.....++.+|++..|+++. .++.|..+|+.
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~ 281 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-A----YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFK 281 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-E----ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHH
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-c----CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccc
Confidence 455543332 36666644311221 1111 1 11456788999777766654 67889999998
Q ss_pred ---cCCc-----------Cce-eec--ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcce---eEeeCC---C--
Q 018697 199 ---SMGK-----------TNS-IEH--AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI---QELPGH---T-- 252 (351)
Q Consensus 199 ---~~~~-----------~~~-~~~--~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~---~-- 252 (351)
++.. ... +.. .. ...++|+|++..++++-.....|+.++.......+ ..+.+. .
T Consensus 282 ~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~ 361 (496)
T 3kya_A 282 TIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGY 361 (496)
T ss_dssp HHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCC
T ss_pred cccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcc
Confidence 5543 011 111 12 78999999998556666677899997765312111 222221 0
Q ss_pred ----------Ccee-EEEec-------CCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccc------c-CCcccccccc
Q 018697 253 ----------HWTW-AVCCN-------PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV------E-SPNQRANSLL 307 (351)
Q Consensus 253 ----------~~v~-~~~~~-------~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~-~~~~~~~~~~ 307 (351)
.... .+... +++ .++++-.....|+.++..- . -....+... . .+-...+.+.
T Consensus 362 ~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~~~G-~-v~TiaG~g~~~~~~~~~~~G~~dG~~~ 438 (496)
T 3kya_A 362 RDDVGTEARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVTPEG-I-VSTYAGRGASTSLADGNQWGTDDGDLR 438 (496)
T ss_dssp BCCBGGGCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEECTTC-B-EEEEEESCTTHHHHHSCSCCCCCEETT
T ss_pred cCCcccccccCCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEeCCC-C-EEEEecccccccccCccccccCCCCch
Confidence 1123 34443 455 6666666778898888321 0 000000000 0 0000000000
Q ss_pred eeeccccceEEEEEeCCC-CCceEEEeeeCCeEEEeecCc
Q 018697 308 NSYSDYEDSVYGLAWSSR-EPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 308 ~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~ 346 (351)
....-....+|+++++ +. ++++-.....||.++++.
T Consensus 439 --~~a~f~~P~gIavd~~~g~-lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 439 --EVARFRDVSGLVYDDVKEM-FYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp --TTCCCSSEEEEEEETTTTE-EEEEETTTTEEEEEEECC
T ss_pred --hhhhcCCCcEEEEECCCCE-EEEEeCCCCEEEEEECCC
Confidence 0011123678999997 66 777777888999998875
No 267
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.63 E-value=5.8e-05 Score=63.02 Aligned_cols=222 Identities=10% Similarity=-0.033 Sum_probs=135.4
Q ss_pred CCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccc
Q 018697 41 ENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120 (351)
Q Consensus 41 ~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~ 120 (351)
.+.|+.+++........ ........+..++|.+.+..|+.+ ....+.|..+++.. .......+...-
T Consensus 12 ~~~I~~i~l~~~~~~~~--~~~~~~~~~~~ld~d~~~~~lyw~---D~~~~~I~r~~~~g--------~~~~~~~~~~~l 78 (318)
T 3sov_A 12 RRDLRLVDATNGKENAT--IVVGGLEDAAAVDFVFSHGLIYWS---DVSEEAIKRTEFNK--------TESVQNVVVSGL 78 (318)
T ss_dssp EEEEEEEETTCTTSCCE--EEEEEEEEEEEEEEEGGGTEEEEE---ETTTTEEEEEETTS--------SSCCCEEEEECC
T ss_pred cCeEEEEECCCCceEEE--EEecCCCccEEEEEEeCCCEEEEE---ECCCCcEEEEEccC--------CCceEEEEcCCC
Confidence 35677777765431111 111122356789999977777765 35667888888762 111111222222
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee--cCCeEEEEEcc
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT--CESSVQFWDLR 198 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~ 198 (351)
.....+++.+.+..++++-...+.|.+++++... ...+... ......++++.|.+..|+.+. ..+.|...++.
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~----~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQ----ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS----SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeC----CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 3566788887666544554667899999987422 2222111 123578899998777777765 25788888876
Q ss_pred cCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-eCCCCceeEEEecCCCCCeEEEeeCC
Q 018697 199 SMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTD 274 (351)
Q Consensus 199 ~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d 274 (351)
.. ....+.... .+.++++|++..++++-...+.|..+|+.. . ....+ .........+++.. + .++.+-...
T Consensus 154 G~-~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~-~~~~~~~~~~~~P~glav~~-~-~lywtd~~~ 228 (318)
T 3sov_A 154 GS-SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-T-NRQAVVKGSLPHPFALTLFE-D-ILYWTDWST 228 (318)
T ss_dssp SC-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-C-SCEEEECSCCSCEEEEEEET-T-EEEEEETTT
T ss_pred CC-CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-C-ceEEEecCCCCCceEEEEeC-C-EEEEEecCC
Confidence 43 333332122 889999997775677667788999999874 2 22333 22334556777753 3 566666677
Q ss_pred CeEEEEEcCCC
Q 018697 275 STVNLWLVSTS 285 (351)
Q Consensus 275 g~i~iwd~~~~ 285 (351)
+.|..++..++
T Consensus 229 ~~V~~~~~~~G 239 (318)
T 3sov_A 229 HSILACNKYTG 239 (318)
T ss_dssp TEEEEEETTTC
T ss_pred CeEEEEECCCC
Confidence 88999988653
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.55 E-value=6e-05 Score=65.18 Aligned_cols=180 Identities=12% Similarity=0.036 Sum_probs=111.5
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCC---CCccccccccc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSN---KNAQVQSKQSS 165 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~---~~~~~~~~~~~ 165 (351)
....|+..++. .... ..+......+..++|.+.+..++++-...+.|+.+++.... ....+...
T Consensus 90 ~~~~I~~i~l~---------~~~~-~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~--- 156 (400)
T 3p5b_L 90 NRHEVRKMTLD---------RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--- 156 (400)
T ss_dssp ETTEEEEECTT---------SCSC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS---
T ss_pred ccceeEEEccC---------Ccce-eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC---
Confidence 34578887776 2122 22223456788999999777645555667889999887422 11111111
Q ss_pred CcccceeeeEECCCCCcEEEe-ecCCeEEEEEcccCCcCceeecc-e-eEEEEcCCCCCcEEEEecC-CCeEEEEecccC
Q 018697 166 GMLHYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAAD-ESGIHLWDLRML 241 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~ 241 (351)
......++++.+.+..|+.+ ...+.|.+.++........+... . +..++++|.+.+++++-.. .+.|...++..
T Consensus 157 -~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG- 234 (400)
T 3p5b_L 157 -DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG- 234 (400)
T ss_dssp -SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS-
T ss_pred -CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC-
Confidence 12257788888766666655 45789999998755433333312 2 8899999977645555433 47898888874
Q ss_pred CcceeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 242 KAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 242 ~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
. ....+ ...-...+.|++++++..+.++-...+.|..+|+..
T Consensus 235 ~-~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 235 V-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp C-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred C-ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 2 23333 333356789999988745555556677899999864
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.55 E-value=1.4e-05 Score=66.98 Aligned_cols=198 Identities=9% Similarity=0.049 Sum_probs=115.6
Q ss_pred ceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccc---------------ccCcccceeeeEECCCCCcEEEe
Q 018697 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ---------------SSGMLHYLSGGAWDPHDVNAVAA 186 (351)
Q Consensus 122 ~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~---------------~~~~~~~v~~~~~~~~~~~l~~~ 186 (351)
...+++|.+++. +++++..++.|..|+..+.. ........ .......+.++++.+++..|+++
T Consensus 20 ~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNK-GFYTSVQDGRVIKYEGPNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCCCEECCTTCS-SEEEECTTSEEEEECCTTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CceEEEEcCCCC-EEEEEcCCCeEEEECCCCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 456788999887 36666678899999877432 11111000 00011246889999744456666
Q ss_pred ecCCeEEEEEcccCCcCceee---cc---e-eEEEEcCC-CCCcEEEEecC-----------------CCeEEEEecccC
Q 018697 187 TCESSVQFWDLRSMGKTNSIE---HA---H-VRNVDYDT-KKKHLLVTAAD-----------------ESGIHLWDLRML 241 (351)
Q Consensus 187 ~~d~~i~iwd~~~~~~~~~~~---~~---~-v~~~~~~~-~~~~~l~~~~~-----------------dg~i~i~d~~~~ 241 (351)
...+.|..+|..++.. ..+. .+ . +..+++.+ +|. ++++... ++.|..||...
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~- 174 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST- 174 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT-
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCC-
Confidence 5556688888775432 1111 11 1 78899999 897 5554322 36788888764
Q ss_pred CcceeEeeCCCCceeEEEecCCCCCe-EEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEE
Q 018697 242 KAPIQELPGHTHWTWAVCCNPEYDGF-ILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (351)
Q Consensus 242 ~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (351)
++ +..+.........++++|++ .. +++-...+.|..|++...... ..+.+..+ .. ...+
T Consensus 175 ~~-~~~~~~~~~~p~gia~~~dg-~~lyv~d~~~~~I~~~~~~~~~~~--------------~~~~~~~~---~g-P~gi 234 (322)
T 2fp8_A 175 KE-TTLLLKELHVPGGAEVSADS-SFVLVAEFLSHQIVKYWLEGPKKG--------------TAEVLVKI---PN-PGNI 234 (322)
T ss_dssp TE-EEEEEEEESCCCEEEECTTS-SEEEEEEGGGTEEEEEESSSTTTT--------------CEEEEEEC---SS-EEEE
T ss_pred CE-EEEeccCCccCcceEECCCC-CEEEEEeCCCCeEEEEECCCCcCC--------------ccceEEeC---CC-CCCe
Confidence 32 22222122345679999999 64 455566789999998741000 01111111 22 6788
Q ss_pred EeCCCCCceEEEeee----------CCeEEEeecC
Q 018697 321 AWSSREPWIFASLSY----------DGRVVVESVK 345 (351)
Q Consensus 321 ~~~~~~~~~l~s~~~----------dg~v~vw~~~ 345 (351)
++.++|. ++++... .+.|..++..
T Consensus 235 ~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 235 KRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp EECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred EECCCCC-EEEEecCcccccccCCCccEEEEECCC
Confidence 9999998 6666544 3556666643
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.54 E-value=2.9e-05 Score=64.58 Aligned_cols=206 Identities=9% Similarity=-0.014 Sum_probs=118.0
Q ss_pred ceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC
Q 018697 110 LERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE 189 (351)
Q Consensus 110 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 189 (351)
.+.+..+... .....++|.+++. ++++...++.|..||.... ...... . .....++++.++++.+++....
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~--~~~~~~--~---~~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGT-IFVTNHEVGEIVSITPDGN--QQIHAT--V---EGKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSC-EEEEETTTTEEEEECTTCC--EEEEEE--C---SSEEEEEEECTTSCEEEEEECT
T ss_pred ceEeEeCCCC-CCcceEEECCCCC-EEEEeCCCCeEEEECCCCc--eEEEEe--C---CCCceeEEEcCCCcEEEEeccC
Confidence 3444455332 4567899999887 3444456789999987642 211111 1 1268889999999855544332
Q ss_pred --CeEEEEEcccCCcCceeec--ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-------e--CCCCce
Q 018697 190 --SSVQFWDLRSMGKTNSIEH--AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-------P--GHTHWT 255 (351)
Q Consensus 190 --~~i~iwd~~~~~~~~~~~~--~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~--~~~~~v 255 (351)
..|..+|..+++....... .. ...++..+.+. ++++...++.|+++|.......+... . ......
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 2476777776654322221 11 44555555554 56655568899999976411011100 0 111234
Q ss_pred eEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeee
Q 018697 256 WAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY 335 (351)
Q Consensus 256 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 335 (351)
+.+ +|++..++++-...+.|..|++..... ......+.. ......++++++|. ++++...
T Consensus 172 ngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~----------------~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~~ 231 (306)
T 2p4o_A 172 NGL--KRFGNFLYVSNTEKMLLLRIPVDSTDK----------------PGEPEIFVE-QTNIDDFAFDVEGN-LYGATHI 231 (306)
T ss_dssp EEE--EEETTEEEEEETTTTEEEEEEBCTTSC----------------BCCCEEEEE-SCCCSSEEEBTTCC-EEEECBT
T ss_pred CCc--CcCCCEEEEEeCCCCEEEEEEeCCCCC----------------CCccEEEec-cCCCCCeEECCCCC-EEEEeCC
Confidence 555 788734556666788999999864100 000111111 12356788999987 7777766
Q ss_pred CCeEEEeecC
Q 018697 336 DGRVVVESVK 345 (351)
Q Consensus 336 dg~v~vw~~~ 345 (351)
.+.|.+++..
T Consensus 232 ~~~V~~~~~~ 241 (306)
T 2p4o_A 232 YNSVVRIAPD 241 (306)
T ss_dssp TCCEEEECTT
T ss_pred CCeEEEECCC
Confidence 7788888764
No 271
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.51 E-value=0.00048 Score=65.27 Aligned_cols=232 Identities=11% Similarity=0.039 Sum_probs=142.8
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee--------ccccceeEEEecCCCCCcEE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD--------AHVGKINCVLWWSSGRHDKL 137 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~~~ 137 (351)
..|.++...+++...+.+ .+ -|.+|+.. .... ..+. .....|.++...++|. +-
T Consensus 263 ~~i~~i~~d~~g~lWigt-----~~-Gl~~~~~~---------~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lW 324 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGT-----FN-DLNIYHEG---------TDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGG--MW 324 (795)
T ss_dssp SBEEEEEECTTSCEEEEE-----SS-CEEEEETT---------TTEE-EEECCCTTSTTSCSSSCEEEEEECTTSC--EE
T ss_pred CeEEEEEEcCCCCEEEEe-----CC-hhheEcCC---------CCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcC--EE
Confidence 568899888888766554 33 57788865 2221 1221 1235799999999888 66
Q ss_pred EEecCCcEEEEEcCCCCCCccccccc--ccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee--------
Q 018697 138 VSIDEENIFLWSLDCSNKNAQVQSKQ--SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE-------- 207 (351)
Q Consensus 138 ~~~~d~~v~iwd~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------- 207 (351)
+++.++-|..|+..+.. ........ ..-....|.++...+++. |.+|+.++.|..||..+++......
T Consensus 325 igt~~~Gl~~~~~~~~~-~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 402 (795)
T 4a2l_A 325 LGTYFGGLNYYHPIRNR-FKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARG 402 (795)
T ss_dssp EEESSSCEEEECGGGGS-SEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------C
T ss_pred EEECCCCeEEeCCCccc-ceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccC
Confidence 66666778888876422 11111100 001123688998888765 6667777789999987654322110
Q ss_pred c-ce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee-----CCCCceeEEEecCCCCCeEEEeeCCCeEEEE
Q 018697 208 H-AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-----GHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280 (351)
Q Consensus 208 ~-~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iw 280 (351)
. .. |.++...+++. +|..|+.++-|.+||.++ ++ ...+. .....|.++...++| .+.+. +.+ .|.+|
T Consensus 403 l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~-~~-~~~~~~~~~~l~~~~v~~i~~d~~g-~lwig-t~~-Gl~~~ 476 (795)
T 4a2l_A 403 IGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNS-GQ-VENFNQRNSQLVNENVYAILPDGEG-NLWLG-TLS-ALVRF 476 (795)
T ss_dssp CSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTT-CC-EEEECTTTSCCSCSCEEEEEECSSS-CEEEE-ESS-CEEEE
T ss_pred CCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCC-Cc-EEEeecCCCCcCCCeeEEEEECCCC-CEEEE-ecC-ceeEE
Confidence 0 12 88998888886 466677777899999875 32 33333 134578999988887 54443 344 48889
Q ss_pred EcCCCCCCCCCCcccccCCcccccccceee------ccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 281 LVSTSNHDELPSESLVESPNQRANSLLNSY------SDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
|... ++..... ......|.++...++|. +.+... + -|..|+..
T Consensus 477 ~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~-~-Gl~~~~~~ 525 (795)
T 4a2l_A 477 NPEQ-------------------RSFTTIEKEKDGTPVVSKQITTLFRDSHKR-LWIGGE-E-GLSVFKQE 525 (795)
T ss_dssp ETTT-------------------TEEEECCBCTTCCBCCCCCEEEEEECTTCC-EEEEES-S-CEEEEEEE
T ss_pred eCCC-------------------CeEEEccccccccccCCceEEEEEECCCCC-EEEEeC-C-ceEEEeCC
Confidence 8875 2211111 11235688999999887 555443 4 46677653
No 272
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.49 E-value=2.6e-05 Score=72.24 Aligned_cols=186 Identities=7% Similarity=0.025 Sum_probs=108.5
Q ss_pred EEEecCCCCCcEEEEecCC-------------------cEEEEEcCCCCCCcccccccccC----cccceeeeEECCCCC
Q 018697 125 CVLWWSSGRHDKLVSIDEE-------------------NIFLWSLDCSNKNAQVQSKQSSG----MLHYLSGGAWDPHDV 181 (351)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~-------------------~v~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~ 181 (351)
.+++.|+... ++++..++ .|..+|..+++............ ...+.....+..+++
T Consensus 234 ~~a~d~~~~~-vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 234 SMAYDPELDL-LYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp CEEEETTTTE-EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceEEcCCCCE-EEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 4677777663 55554443 48899998877655443321110 001222222222454
Q ss_pred ---cEEEeecCCeEEEEEcccCCcCceeecce--------------------------------------eEEEEcCCCC
Q 018697 182 ---NAVAATCESSVQFWDLRSMGKTNSIEHAH--------------------------------------VRNVDYDTKK 220 (351)
Q Consensus 182 ---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------------------------------------v~~~~~~~~~ 220 (351)
.++.++.+|.++++|.++++.+....... -..++++|+.
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~ 392 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT 392 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC
Confidence 57888899999999999998763222100 1125677776
Q ss_pred CcEEEEe------------------------------------cCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCC
Q 018697 221 KHLLVTA------------------------------------ADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY 264 (351)
Q Consensus 221 ~~~l~~~------------------------------------~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (351)
. +++.. ..+|.|..||+.+ ++.+-+...+ .+.....+...+
T Consensus 393 g-~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t-G~~~W~~~~~-~~~~~~~~~t~g 469 (668)
T 1kv9_A 393 G-LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK-QKAAWKVPYP-THWNGGTLSTAG 469 (668)
T ss_dssp T-EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-TEEEEEEEES-SSCCCCEEEETT
T ss_pred C-EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC-CcEEEEccCC-CCCcCceeEeCC
Confidence 5 33321 1347899999987 6555555432 233333444456
Q ss_pred CCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceE-EEEEeCCCCCceEEEee
Q 018697 265 DGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSV-YGLAWSSREPWIFASLS 334 (351)
Q Consensus 265 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~s~~ 334 (351)
.+++.++.|+.++.||.++ ++.+..+....... .-+.+..+|+.+++.+.
T Consensus 470 -g~vf~g~~dg~l~a~d~~t-------------------G~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 470 -NLVFQGTAAGQMHAYSADK-------------------GEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp -TEEEEECTTSEEEEEETTT-------------------CCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred -CEEEEECCcccchhhhhhc-------------------ChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 7888899999999999998 77777775432111 12334456664454443
No 273
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.47 E-value=2.2e-05 Score=72.61 Aligned_cols=230 Identities=11% Similarity=-0.021 Sum_probs=117.4
Q ss_pred ceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEe-cC---
Q 018697 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI-DE--- 142 (351)
Q Consensus 67 ~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~-~d--- 142 (351)
...++++.++++.++.+ |..+..+.+||... ..+..+..+.... .-.+++..++++ +++.++ .+
T Consensus 244 ~~~~~~~~~~g~lyv~G---G~~~~~v~~yd~~t-------~~W~~~~~~~~~R-~~~s~~~~~dg~-iyv~GG~~~~~~ 311 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTG---GNDAKKTSLYDSSS-------DSWIPGPDMQVAR-GYQSSATMSDGR-VFTIGGSWSGGV 311 (656)
T ss_dssp SSCEEEECTTSCEEEEC---SSSTTCEEEEEGGG-------TEEEECCCCSSCC-SSCEEEECTTSC-EEEECCCCCSSS
T ss_pred ccccccCCCCCCEEEeC---CCCCCceEEecCcC-------CceeECCCCCccc-cccceEEecCCe-EEEEeCcccCCc
Confidence 33456777878766663 33456899999872 1333333332211 113445566777 466665 33
Q ss_pred --CcEEEEEcCCCCCCccccc----ccccCcccceeeeEECCCCCcEEEeecC---------CeEEEEEcccCCcCceee
Q 018697 143 --ENIFLWSLDCSNKNAQVQS----KQSSGMLHYLSGGAWDPHDVNAVAATCE---------SSVQFWDLRSMGKTNSIE 207 (351)
Q Consensus 143 --~~v~iwd~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~ 207 (351)
..+.+||..+..- .... ..... .-....+..++..++.++.+ ..+..||..+........
T Consensus 312 ~~~~~e~yd~~t~~W--~~~~~~~~~p~~~---~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~ 386 (656)
T 1k3i_A 312 FEKNGEVYSPSSKTW--TSLPNAKVNPMLT---ADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 386 (656)
T ss_dssp CCCCEEEEETTTTEE--EEETTSCSGGGCC---CCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred ccccceEeCCCCCcc--eeCCCcccccccc---ccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC
Confidence 5689999986421 1110 00000 00011223345555555444 456788887654221111
Q ss_pred ---c-------ce-eEEEEcCC-CCCcEEEEecCCC-----------eEEEEecccCCcceeEee---CCCCc-eeEEEe
Q 018697 208 ---H-------AH-VRNVDYDT-KKKHLLVTAADES-----------GIHLWDLRMLKAPIQELP---GHTHW-TWAVCC 260 (351)
Q Consensus 208 ---~-------~~-v~~~~~~~-~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~~---~~~~~-v~~~~~ 260 (351)
. .. -.++.+.. +++ +++.|+.++ .|.+||..+ .. ...+. .+... -.++..
T Consensus 387 ~~~~~~~~~~~~~~~~av~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~v~~yd~~~-~~-W~~~~~~~mp~~R~~~~~~~ 463 (656)
T 1k3i_A 387 KRQSNRGVAPDAMCGNAVMYDAVKGK-ILTFGGSPDYQDSDATTNAHIITLGEPGT-SP-NTVFASNGLYFARTFHTSVV 463 (656)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTE-EEEECCBSSSSSSBCCCCEEEEECCSTTS-CC-EEEECTTCCSSCCBSCEEEE
T ss_pred ccccccccCCCCCCCceEeccCCCCe-EEEEeCCCCCCCCCcCCcceEEEcCCCCC-CC-eeEEccCCCCCCcccCCeEE
Confidence 0 01 23444433 454 788887532 677888765 22 22221 11222 234456
Q ss_pred cCCCCCeEEEeeCC-----------CeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCce
Q 018697 261 NPEYDGFILSAGTD-----------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWI 329 (351)
Q Consensus 261 ~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 329 (351)
.|++ .+++.|+.+ ..+.+||..+. .+..+..............+.|+++ +
T Consensus 464 l~~g-~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~-----------------~W~~~~~~~~~R~~hs~a~ll~dg~-v 524 (656)
T 1k3i_A 464 LPDG-STFITGGQRRGIPFEDSTPVFTPEIYVPEQD-----------------TFYKQNPNSIVRVYHSISLLLPDGR-V 524 (656)
T ss_dssp CTTS-CEEEECCBSBCCTTCCCSBCCCCEEEEGGGT-----------------EEEECCCCSSCCCTTEEEEECTTSC-E
T ss_pred CCCC-CEEEECCcccCcCcCCCCcccceEEEcCCCC-----------------ceeecCCCCCccccccHhhcCCCcE-E
Confidence 7888 888888864 46788988751 1222222211111122344678888 8
Q ss_pred EEEeee
Q 018697 330 FASLSY 335 (351)
Q Consensus 330 l~s~~~ 335 (351)
++.||.
T Consensus 525 ~v~GG~ 530 (656)
T 1k3i_A 525 FNGGGG 530 (656)
T ss_dssp EEEECC
T ss_pred EecCCC
Confidence 888874
No 274
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.44 E-value=0.0005 Score=58.26 Aligned_cols=237 Identities=8% Similarity=0.012 Sum_probs=122.9
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee---ccccceeEEEecCC---CCCcEEE
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD---AHVGKINCVLWWSS---GRHDKLV 138 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~~~~~ 138 (351)
-...+.++|.|+++.+++ ...+.|.+++ .. ....+..+. ........|+++|+ +..++++
T Consensus 30 l~~P~~ia~~pdG~l~V~-----e~~g~I~~i~-~g--------~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-----ERPGRIRLFR-EG--------RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-----ETTTEEEEEE-TT--------EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCceEEEEcCCCeEEEE-----eCCCeEEEEE-CC--------CccEeecceEeecCCCCceeEEECCCCCCCCEEEEE
Confidence 345679999999985554 2458888887 31 222222221 22456789999998 5544444
Q ss_pred EecC-----CcEEEEEcCCCCC--Ccccccccc--cCcccceeeeEECCCCCcEEEeec-------------CCeEEEEE
Q 018697 139 SIDE-----ENIFLWSLDCSNK--NAQVQSKQS--SGMLHYLSGGAWDPHDVNAVAATC-------------ESSVQFWD 196 (351)
Q Consensus 139 ~~~d-----~~v~iwd~~~~~~--~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd 196 (351)
.... +.|..++...... ...+..... .+.......++|.|++...++.+. .+.|.-++
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~ 175 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLT 175 (352)
T ss_dssp EEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEEC
T ss_pred EecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEc
Confidence 4433 6788888764211 111111111 111124568999999965554332 15666666
Q ss_pred cccC------------CcCceeecce--eEEEEcCC-CCCcEEEEecCCCe--------EEEEeccc-------------
Q 018697 197 LRSM------------GKTNSIEHAH--VRNVDYDT-KKKHLLVTAADESG--------IHLWDLRM------------- 240 (351)
Q Consensus 197 ~~~~------------~~~~~~~~~~--v~~~~~~~-~~~~~l~~~~~dg~--------i~i~d~~~------------- 240 (351)
.... .....+..++ ...++|+| ++. ++++-..... |.+.....
T Consensus 176 ~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 176 PEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGE-LFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND 254 (352)
T ss_dssp TTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCC-EEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred CCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCC-EEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC
Confidence 5431 1122223233 78899999 565 5554333222 43332111
Q ss_pred --CCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEE
Q 018697 241 --LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVY 318 (351)
Q Consensus 241 --~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (351)
...++..+. +......++| .+| .++++.-..+.|...++........ ... ...+-.....+.
T Consensus 255 ~~~~~p~~~~~-~~~ap~G~~~-~~G-~l~v~~~~~~~v~~v~~~~~~~~~~------------~~~-~~~~~~~~~rp~ 318 (352)
T 2ism_A 255 PRYRDPLYFWP-QGFPPGNLAF-FRG-DLYVAGLRGQALLRLVLEGERGRWR------------VLR-VETALSGFGRLR 318 (352)
T ss_dssp TTSCCCSEECT-TCCCEEEEEE-ETT-EEEEEETTTTEEEEEEEEEETTEEE------------EEE-EEEEEESSCCEE
T ss_pred CCCcCCeEecC-CCCCCcceEE-ECC-EEEEEECCCCEEEEEEECCCCccee------------ecc-hheecccCCCee
Confidence 012333332 2234567777 456 6666666667777777654100000 000 111111224689
Q ss_pred EEEeCCCCCceEEEe
Q 018697 319 GLAWSSREPWIFASL 333 (351)
Q Consensus 319 ~~~~~~~~~~~l~s~ 333 (351)
.+++.|+|. ++++.
T Consensus 319 ~v~~~pdG~-lyv~~ 332 (352)
T 2ism_A 319 EVQVGPDGA-LYVTT 332 (352)
T ss_dssp EEEECTTSC-EEEEE
T ss_pred EEEECCCCc-EEEEE
Confidence 999999998 55444
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.43 E-value=0.00021 Score=67.04 Aligned_cols=223 Identities=8% Similarity=-0.056 Sum_probs=131.7
Q ss_pred CEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecccc
Q 018697 42 NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG 121 (351)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~ 121 (351)
..|+.+.+..... ..+......+..|+|.+....|+.+ ....+.|+.+++..... .......+.....
T Consensus 404 ~~Ir~i~l~~~~~----~~l~~~~~~~~gl~~d~~~~~lY~s---D~~~~~I~~~~l~g~~~-----~~~~~~vi~~~l~ 471 (791)
T 3m0c_C 404 HEVRKMTLDRSEY----TSLIPNLRNVVALDTEVASNRIYWS---DLSQRMICSTQLDRAHG-----VSSYDTVISRDIQ 471 (791)
T ss_dssp SSEEEECTTSCCC----EEEECSCSSEEEEEEETTTTEEEEE---ETTTTEEEEEEC-------------CEEEECSSCS
T ss_pred cceeEeeccCCcc----eeeecCCCceEEEeecccCCeeEEe---eccceeEEEEeccCCCC-----CcceeEEEecCCC
Confidence 4455555554322 1223345667789999877777765 35567888888762000 0112222332345
Q ss_pred ceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec--CCeEEEEEccc
Q 018697 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRS 199 (351)
Q Consensus 122 ~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~ 199 (351)
....|++.+.+..++++-...+.|.+.+++... ...+... ......+|+++|....|+.+.. .+.|...++..
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~--~~~l~~~---~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLFRE---NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSS--EEEEEEC---TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCe--EEEEEeC---CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 567899988887655555778899999987422 2222211 1225789999998777777652 36888888874
Q ss_pred CCcCceeecc-e-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC--CCceeEEEecCCCCCeEEEeeCCC
Q 018697 200 MGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH--THWTWAVCCNPEYDGFILSAGTDS 275 (351)
Q Consensus 200 ~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg 275 (351)
......+... . ...|++++.+..++++-.....|..+++.. ......+... -.....|++.. + .++++-...+
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~glav~~-~-~lYwtD~~~~ 623 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFE-D-KVFWTDIINE 623 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEET-T-EEEEEETTTT
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCCEEEEeC-C-EEEEEECCCC
Confidence 4332222212 2 889999987775666666678999999874 3222222221 22344666533 2 5666666677
Q ss_pred eEEEEEcCC
Q 018697 276 TVNLWLVST 284 (351)
Q Consensus 276 ~i~iwd~~~ 284 (351)
.|...|..+
T Consensus 624 ~I~~~dk~t 632 (791)
T 3m0c_C 624 AIFSANRLT 632 (791)
T ss_dssp EEEEEETTT
T ss_pred EEEEEeCCC
Confidence 888887655
No 276
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.43 E-value=3e-06 Score=78.72 Aligned_cols=202 Identities=7% Similarity=-0.071 Sum_probs=120.2
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCc
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~ 144 (351)
...+..++|.+.+..|+.+ ....+.|+.+++..... .......+...-.....|++.+.+..++++-...+.
T Consensus 405 ~~~p~gla~d~~~~~Ly~s---D~~~~~I~~~~~~g~~~-----~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~ 476 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWS---DLSQRMICSTQLDRAHG-----VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT 476 (699)
T ss_dssp CTTCCCCEEETTTTEEEEC---CTTTTSBEEEESCCCCC------CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSC
T ss_pred CcceEEEccccccCeEEEE---ecCCCeEEEEecCCCCC-----CcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCe
Confidence 3466789999888777775 34567888888762000 011111111112235568888666654555466789
Q ss_pred EEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec--CCeEEEEEcccCCcCceeecc--e-eEEEEcCCC
Q 018697 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSMGKTNSIEHA--H-VRNVDYDTK 219 (351)
Q Consensus 145 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~--~-v~~~~~~~~ 219 (351)
|.++++.... ...+.... ......++++|.+..|+.+.. .+.|..+++.... ...+... . .+.|+|+|+
T Consensus 477 I~v~d~dg~~-~~~l~~~~----~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~ 550 (699)
T 1n7d_A 477 VSVADTKGVK-RKTLFREQ----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLL 550 (699)
T ss_dssp EEEEBSSSCC-EEEECCCS----SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTT
T ss_pred EEEEecCCCc-eEEEEeCC----CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEecc
Confidence 9999987432 12221111 125678899998777776653 3678887776432 2222211 2 788999998
Q ss_pred CCcEEEEecCCCeEEEEecccCCcceeEeeC---CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 220 KKHLLVTAADESGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
+..++++-...+.|..+++.. . ....+.. .......|++..+ .++++....+.|..++..+
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG-~-~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSS-S-CCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTT
T ss_pred CCEEEEEecCCCeEEEEccCC-C-ceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccC
Confidence 775777777788999999864 2 2233321 1123345555443 5666666778899998765
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.39 E-value=0.00018 Score=59.39 Aligned_cols=161 Identities=12% Similarity=0.037 Sum_probs=104.2
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccc--cCcccceeeeEE---CCCCCcEEEee-------
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS--SGMLHYLSGGAW---DPHDVNAVAAT------- 187 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~---~~~~~~l~~~~------- 187 (351)
..-..+++|.+....++++.-..++|..|+...+........... ......+.++.| .|+++.+++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 334457889886664344445689999999874322211111100 111224689999 68866666433
Q ss_pred ------cCCeEEEEEcc---cCCcCceeec-----c---------e-eEEEEcCCCCCcEEEEecCC-CeEEEEecccCC
Q 018697 188 ------CESSVQFWDLR---SMGKTNSIEH-----A---------H-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRMLK 242 (351)
Q Consensus 188 ------~d~~i~iwd~~---~~~~~~~~~~-----~---------~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~ 242 (351)
.+..|..||+. +++.+..... + . ...++..++|+ ..++++.. +.|..++...
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG-- 168 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADG-- 168 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTS--
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCC--
Confidence 26789999999 7776654431 1 2 88999999998 78878877 8877777653
Q ss_pred cceeEee------CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 243 APIQELP------GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 243 ~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
+.+..+. ......+.|+++|+| .+|+.....+.|..+|+..
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSS
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCC
Confidence 2333322 112236799999999 6666665599999999884
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.39 E-value=0.00031 Score=65.86 Aligned_cols=180 Identities=12% Similarity=0.037 Sum_probs=110.0
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCC---Cccccccccc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNK---NAQVQSKQSS 165 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~---~~~~~~~~~~ 165 (351)
....|+..++. ... ...+......+..|+|.+....++++-...+.|+.+++..... ...+...
T Consensus 402 n~~~Ir~i~l~---------~~~-~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~--- 468 (791)
T 3m0c_C 402 NRHEVRKMTLD---------RSE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--- 468 (791)
T ss_dssp CBSSEEEECTT---------SCC-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS---
T ss_pred cccceeEeecc---------CCc-ceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec---
Confidence 34567766665 112 2222234456788999987665455556678899998874211 1111111
Q ss_pred CcccceeeeEECCCCCcEEEee-cCCeEEEEEcccCCcCceeecc-e-eEEEEcCCCCCcEEEEecCC-CeEEEEecccC
Q 018697 166 GMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRML 241 (351)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~ 241 (351)
......+|++.+.++.|+.+. ..+.|.+.++........+... . ...|+++|.+.+++++-..+ +.|.+.++..
T Consensus 469 -~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG- 546 (791)
T 3m0c_C 469 -DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG- 546 (791)
T ss_dssp -SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-
T ss_pred -CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC-
Confidence 123567889988777777664 6789999998754432222211 2 88999999866455554333 7899888874
Q ss_pred CcceeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 242 KAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 242 ~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
.....+ ...-...+.|++++.+..++++-.....|...++..
T Consensus 547 -~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 547 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp -CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 333333 333357889999987735555555667888888864
No 279
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.38 E-value=3.9e-05 Score=69.54 Aligned_cols=75 Identities=13% Similarity=-0.028 Sum_probs=48.0
Q ss_pred eEECCCCCcEEEeecC----------------CeEEEEEcccCCcCceeecc-----------eeEEEEcCCCCC--cEE
Q 018697 174 GAWDPHDVNAVAATCE----------------SSVQFWDLRSMGKTNSIEHA-----------HVRNVDYDTKKK--HLL 224 (351)
Q Consensus 174 ~~~~~~~~~l~~~~~d----------------~~i~iwd~~~~~~~~~~~~~-----------~v~~~~~~~~~~--~~l 224 (351)
+++.++...++.+..+ +.|..+|.++++.+..++.. ...-+...++|+ .++
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 5666666667666532 36899999999887766532 111122223563 367
Q ss_pred EEecCCCeEEEEecccCCcceeEee
Q 018697 225 VTAADESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (351)
+.++.+|.++++|.++ ++.+..+.
T Consensus 320 ~~~~~~G~l~~lD~~t-G~~~w~~~ 343 (571)
T 2ad6_A 320 SHIDRNGILYTLNREN-GNLIVAEK 343 (571)
T ss_dssp EEECTTSEEEEEETTT-CCEEEEEE
T ss_pred EEeCCCcEEEEEECCC-CCEEeeec
Confidence 7788999999999887 55555443
No 280
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.37 E-value=2.3e-05 Score=72.58 Aligned_cols=152 Identities=10% Similarity=0.000 Sum_probs=88.9
Q ss_pred CCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccc----cceeEEEecCCCCCcEEEEec------CCcEE
Q 018697 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV----GKINCVLWWSSGRHDKLVSID------EENIF 146 (351)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~~~~~~------d~~v~ 146 (351)
+..+++. +.|+.|..+|.. +++.+-.+.... ..+.+--.-.++. ++++.. ++.|.
T Consensus 117 ~~~v~v~----~~dg~l~alD~~---------tG~~~W~~~~~~~~~~~~~~~~P~v~~~~--v~vg~~~~~~~~~g~v~ 181 (668)
T 1kv9_A 117 GDKVYVG----TLDGRLIALDAK---------TGKAIWSQQTTDPAKPYSITGAPRVVKGK--VIIGNGGAEYGVRGFVS 181 (668)
T ss_dssp BTEEEEE----CTTSEEEEEETT---------TCCEEEEEECSCTTSSCBCCSCCEEETTE--EEECCBCTTTCCBCEEE
T ss_pred CCEEEEE----cCCCEEEEEECC---------CCCEeeeeccCCCCCcceecCCCEEECCE--EEEeCCCCCcCCCCEEE
Confidence 4455554 578899999987 455544443211 1111100001333 455422 58899
Q ss_pred EEEcCCCCCCcccccccc-c-------------------------CcccceeeeEECCCCCcEEEeecCC----------
Q 018697 147 LWSLDCSNKNAQVQSKQS-S-------------------------GMLHYLSGGAWDPHDVNAVAATCES---------- 190 (351)
Q Consensus 147 iwd~~~~~~~~~~~~~~~-~-------------------------~~~~~v~~~~~~~~~~~l~~~~~d~---------- 190 (351)
.+|..+++.......... . +.......++++|+...+++++.++
T Consensus 182 a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~ 261 (668)
T 1kv9_A 182 AYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSP 261 (668)
T ss_dssp EEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHST
T ss_pred EEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCC
Confidence 999988776554432100 0 0001122467888888888877665
Q ss_pred ---------eEEEEEcccCCcCceeecce-------------eEEEEcCCCCC--cEEEEecCCCeEEEEecccCCccee
Q 018697 191 ---------SVQFWDLRSMGKTNSIEHAH-------------VRNVDYDTKKK--HLLVTAADESGIHLWDLRMLKAPIQ 246 (351)
Q Consensus 191 ---------~i~iwd~~~~~~~~~~~~~~-------------v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~ 246 (351)
.|..+|+++++.+..++..+ ...+.+ +++ ..++.++.+|.++++|.++ ++.+.
T Consensus 262 ~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~--~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~ 338 (668)
T 1kv9_A 262 GGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI--DGKPRKVLMQAPKNGFFYVLDRTN-GKLIS 338 (668)
T ss_dssp TCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--TTEEEEEEEECCTTSEEEEEETTT-CCEEE
T ss_pred CCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc--CCcEEEEEEEECCCCEEEEEECCC-CCEec
Confidence 49999999999887776421 222233 443 2588899999999999887 55553
No 281
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.34 E-value=0.001 Score=60.85 Aligned_cols=222 Identities=11% Similarity=0.008 Sum_probs=139.9
Q ss_pred CCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccc
Q 018697 41 ENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120 (351)
Q Consensus 41 ~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~ 120 (351)
.+.|+.+++....... ......-..+..++|.+.+..|+.+ ...++.|..+++.. ......+....
T Consensus 14 ~~~I~~i~l~~~~~~~--~~~~~~~~~~~~l~~d~~~~~lywt---D~~~~~I~r~~~~g---------~~~~~v~~~g~ 79 (628)
T 4a0p_A 14 RADIRRISLETNNNNV--AIPLTGVKEASALDFDVTDNRIYWT---DISLKTISRAFMNG---------SALEHVVEFGL 79 (628)
T ss_dssp TTEEEEEESSCTTCEE--ECCCCSCSCEEEEEEETTTTEEEEE---ETTTTEEEEEETTS---------CSCEEEECSSC
T ss_pred CCcEEEEECCCCCcce--EEEcCCCCceEEEEEECCCCEEEEE---ECCCCeEEEEECCC---------CCcEEEEeCCC
Confidence 5778888887543211 1111223567899999988888776 35677888888761 11122222222
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee--cCCeEEEEEcc
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT--CESSVQFWDLR 198 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~ 198 (351)
.....+++.+.+..++++-...+.|.+.+++... ...+... ......+++++|....|+.+. ..+.|...++.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~--~~~l~~~---~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d 154 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH--RQVLVWK---DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD 154 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT--CEEEECS---SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc--EEEEEeC---CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC
Confidence 4567888887777645554667899999987432 2222111 123578999999777777665 25678888876
Q ss_pred cCCcCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeE
Q 018697 199 SMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV 277 (351)
Q Consensus 199 ~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 277 (351)
............ ...+++++++..++++-...+.|..+|+..... ..+.........+++.. + .++.+-...+.|
T Consensus 155 G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~-~ly~tD~~~~~I 230 (628)
T 4a0p_A 155 GSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-D-YIYWTDWSRRSI 230 (628)
T ss_dssp SCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET-T-EEEEEETTTTEE
T ss_pred CCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC-C-EEEEecCCCCEE
Confidence 544322222222 899999998775667667788999999875222 33333334456777765 4 566666668888
Q ss_pred EEEEcCCC
Q 018697 278 NLWLVSTS 285 (351)
Q Consensus 278 ~iwd~~~~ 285 (351)
...|..++
T Consensus 231 ~~~dk~tg 238 (628)
T 4a0p_A 231 ERANKTSG 238 (628)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 88887654
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=0.00095 Score=63.13 Aligned_cols=236 Identities=12% Similarity=0.037 Sum_probs=136.7
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeee------------eeccccceeEEEecCCCC
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA------------LDAHVGKINCVLWWSSGR 133 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~------------~~~h~~~v~~~~~~~~~~ 133 (351)
..|.++...+++...+.+ ..+-|.+++.... ....... .......|.++...++|.
T Consensus 258 ~~i~~i~~d~~g~lWigt-----~~~Gl~~~~~~~~-------~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~ 325 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIAT-----ELNGIMILDLQQN-------QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN 325 (781)
T ss_dssp CCEEEEEECTTSEEEEEE-----SSSCEEEEETTCC----------------CEEECBCSSTTSBSSSCEEEEEECSSCC
T ss_pred ceEEEEEECCCCCEEEEe-----CCCCeEEECCCCC-------eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC
Confidence 567888777777655543 3345777776521 1111110 012345789999888887
Q ss_pred CcEEEEecCCcEEEEEcCCCCCCcccccc-----cccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCce---
Q 018697 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSK-----QSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS--- 205 (351)
Q Consensus 134 ~~~~~~~~d~~v~iwd~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--- 205 (351)
+-++..++-|..++..... ....... ...-....|.++...+++. |.+|+.++.|..||..++.....
T Consensus 326 --lWigt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~ 401 (781)
T 3v9f_A 326 --IWIGTWGGGINFISNAPPT-FHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKEN 401 (781)
T ss_dssp --EEEEEBSSCEEEECSSCCS-CEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC---
T ss_pred --EEEEecCCeEEEeCCCCCc-ceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCC
Confidence 5666666778888876432 1111110 0011123688888887665 66677667788899775432211
Q ss_pred --eecceeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee---CCCCceeEEEecCCCCCeEEEeeCCCeEEEE
Q 018697 206 --IEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP---GHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280 (351)
Q Consensus 206 --~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iw 280 (351)
+....|.++...+++. |..|+.++-|..+|.++ + .+..+. .....|.++...+++ .+.+ |+. +-|..|
T Consensus 402 ~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~-~-~~~~~~~~~~~~~~v~~i~~d~~g-~lwi-gt~-~Gl~~~ 474 (781)
T 3v9f_A 402 RELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRL-K-KFQIIELEKNELLDVRVFYEDKNK-KIWI-GTH-AGVFVI 474 (781)
T ss_dssp --CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSS-C-EEEECCSTTTCCCCEEEEEECTTS-EEEE-EET-TEEEEE
T ss_pred CCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCC-C-cEEEeccCCCCCCeEEEEEECCCC-CEEE-EEC-CceEEE
Confidence 1111189999888886 44477767788898764 3 233332 134678899888887 4444 444 458889
Q ss_pred EcCCCCCCCCCCcccccCCcccccccceeec-----cccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 281 LVSTSNHDELPSESLVESPNQRANSLLNSYS-----DYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
|... .+...... .....|.++...++|. +.+. +.++-|..|+..
T Consensus 475 ~~~~-------------------~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWig-t~~~Gl~~~~~~ 523 (781)
T 3v9f_A 475 DLAS-------------------KKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIG-TFGGGVGIYTPD 523 (781)
T ss_dssp ESSS-------------------SSCCEEECTTTSSCSCSCEEEEEECTTCC-EEEE-ESSSCEEEECTT
T ss_pred eCCC-------------------CeEEecccCcccccccceeEEEEEcCCCC-EEEE-EcCCCEEEEeCC
Confidence 8876 22111111 1135688999998887 4444 433336667654
No 283
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.30 E-value=0.00024 Score=64.53 Aligned_cols=75 Identities=13% Similarity=0.003 Sum_probs=49.9
Q ss_pred eEECCCCCcEEEeecC----------------CeEEEEEcccCCcCceeecce-----------eEEEEcC-CCCC--cE
Q 018697 174 GAWDPHDVNAVAATCE----------------SSVQFWDLRSMGKTNSIEHAH-----------VRNVDYD-TKKK--HL 223 (351)
Q Consensus 174 ~~~~~~~~~l~~~~~d----------------~~i~iwd~~~~~~~~~~~~~~-----------v~~~~~~-~~~~--~~ 223 (351)
.++.++...++.+..+ +.|.-+|.++++.+..++..+ ..-+... .+|+ .+
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~ 325 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKL 325 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEE
Confidence 4566677777777654 389999999998877766432 1112221 4562 26
Q ss_pred EEEecCCCeEEEEecccCCcceeEee
Q 018697 224 LVTAADESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 224 l~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (351)
++.++.+|.++++|.++ ++++....
T Consensus 326 v~~~~~~G~l~~lD~~t-G~~lw~~~ 350 (599)
T 1w6s_A 326 LTHPDRNGIVYTLDRTD-GALVSANK 350 (599)
T ss_dssp EEEECTTSEEEEEETTT-CCEEEEEE
T ss_pred EEEECCCcEEEEEECCC-CCEeeccc
Confidence 77789999999999987 65555443
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=3.9e-05 Score=66.99 Aligned_cols=154 Identities=9% Similarity=0.073 Sum_probs=99.2
Q ss_pred ceeeeEECC-CCCcEEEeecCCeEEEEEcccCCcCceeecce-eEEEEcCCCCCcEEEEecCCC----eEEEEecccCCc
Q 018697 170 YLSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADES----GIHLWDLRMLKA 243 (351)
Q Consensus 170 ~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~ 243 (351)
....++++| ++..|+++...+.|+.+|+..+.......... ...++|+++++.++++...++ .+..++......
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 567889998 46667777655889999988755433333223 899999999985555544332 344455432111
Q ss_pred ceeEeeCCCCceeEEEecC-CCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccccc--ceeeccccceEEEE
Q 018697 244 PIQELPGHTHWTWAVCCNP-EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDYEDSVYGL 320 (351)
Q Consensus 244 ~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~ 320 (351)
....+.. ......++++| ++ .++++-..++.|..++... ... +..... ......+
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g-~lyv~d~~~~~V~~~~~~~-------------------~~~~~~~~~~~-~~~P~gi 275 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPING-ELYFNSWNAGQVFRYDFTT-------------------QETTPLFTIQD-SGWEFHI 275 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTC-CEEEEETTTTEEEEEETTT-------------------TEEEEEEECSS-SSCCEEE
T ss_pred eeeeecc-CCCceEEEEeCCCC-EEEEEECCCCEEEEEECCC-------------------CcEEEEEEcCC-CCcceeE
Confidence 1123322 33457888999 56 7777777788999999875 322 112211 2346789
Q ss_pred EeCCCCCceEEEeeeCCeEEEeecC
Q 018697 321 AWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 321 ~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+|+|++++++++-...+.|..++.+
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCC
Confidence 9999998666666678889998765
No 285
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.27 E-value=0.00013 Score=66.10 Aligned_cols=167 Identities=11% Similarity=0.023 Sum_probs=96.9
Q ss_pred cEEEEEcCCCCCCccccccccc-----CcccceeeeEECCCCC---cEEEeecCCeEEEEEcccCCcCceeecce-----
Q 018697 144 NIFLWSLDCSNKNAQVQSKQSS-----GMLHYLSGGAWDPHDV---NAVAATCESSVQFWDLRSMGKTNSIEHAH----- 210 (351)
Q Consensus 144 ~v~iwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----- 210 (351)
.|..+|..+++........... ....++. +...++++ .++.++.+|.++++|.++++.+.......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 5888998887655443322110 0111221 22223563 46677889999999999988665443110
Q ss_pred ----------e--------------------------EEEEcCCCCCcEEEEec--------------------------
Q 018697 211 ----------V--------------------------RNVDYDTKKKHLLVTAA-------------------------- 228 (351)
Q Consensus 211 ----------v--------------------------~~~~~~~~~~~~l~~~~-------------------------- 228 (351)
+ ..++++|+.. ++++..
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR-TLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC-EEEEEchhccccccccccccccCCccccccce
Confidence 0 2356777776 444432
Q ss_pred -----------CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCccccc
Q 018697 229 -----------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297 (351)
Q Consensus 229 -----------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 297 (351)
.++.|..||..+ ++.+.++.. ...+....+...+ .+++.++.|+.|+.+|.++
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~t-G~~~W~~~~-~~~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~t------------- 494 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTT-GKAKWTKWE-KFAAWGGTLYTKG-GLVWYATLDGYLKALDNKD------------- 494 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETT-TEEEEECTTSEEEEEETTT-------------
T ss_pred eccCccccCCCCCCeEEEEECCC-CCEEEEecC-CCCccceeEEECC-CEEEEEcCCCeEEEEECCC-------------
Confidence 357899999987 555555542 2233333333334 5677789999999999998
Q ss_pred CCcccccccceeeccccce-EEEEEeCCCCCceEEEee
Q 018697 298 SPNQRANSLLNSYSDYEDS-VYGLAWSSREPWIFASLS 334 (351)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~s~~ 334 (351)
++.+..+...... -.-+.+..+|+.++++.+
T Consensus 495 ------G~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 495 ------GKELWNFKMPSGGIGSPMTYSFKGKQYIGSMY 526 (571)
T ss_dssp ------CCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ------CCEEEEEeCCCCcEeeeEEEEECCEEEEEEEC
Confidence 7877777543211 112335567774444443
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.26 E-value=0.001 Score=55.72 Aligned_cols=234 Identities=12% Similarity=0.068 Sum_probs=118.4
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCc
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~ 144 (351)
...+.+|.|.+ + .++++ +..+. ||..... ..+++.+.....+...+..+.+.+++. +++.+.++.
T Consensus 79 ~~~~~~i~~~~-~-~~~~~----g~~g~--i~~S~Dg-----G~tW~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~g~ 143 (327)
T 2xbg_A 79 DYRFNSVSFQG-N-EGWIV----GEPPI--MLHTTDG-----GQSWSQIPLDPKLPGSPRLIKALGNGS--AEMITNVGA 143 (327)
T ss_dssp CCEEEEEEEET-T-EEEEE----EETTE--EEEESST-----TSSCEECCCCTTCSSCEEEEEEEETTE--EEEEETTCC
T ss_pred CccEEEEEecC-C-eEEEE----ECCCe--EEEECCC-----CCCceECccccCCCCCeEEEEEECCCC--EEEEeCCcc
Confidence 34688888876 3 34443 34453 3333210 012333222212334567777776665 455555565
Q ss_pred EEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEE-EEcccCCcCceeec--ce-eEEEEcCCCC
Q 018697 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQF-WDLRSMGKTNSIEH--AH-VRNVDYDTKK 220 (351)
Q Consensus 145 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i-wd~~~~~~~~~~~~--~~-v~~~~~~~~~ 220 (351)
| |...++.......... ....+..+.+.+++..++++ .++.+.. .|- .+..-..+.. .. +..+++.+++
T Consensus 144 v--~~S~DgG~tW~~~~~~---~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g 216 (327)
T 2xbg_A 144 I--YRTKDSGKNWQALVQE---AIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDG 216 (327)
T ss_dssp E--EEESSTTSSEEEEECS---CCCCEEEEEECTTSCEEEEE-TTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTS
T ss_pred E--EEEcCCCCCCEEeecC---CCcceEEEEEcCCCcEEEEE-CCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCC
Confidence 4 3333333333332222 23368889999987766554 4444433 332 1222222221 12 8888899988
Q ss_pred CcEEEEecCCCeEEEEecccCCcceeEee----CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccc
Q 018697 221 KHLLVTAADESGIHLWDLRMLKAPIQELP----GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296 (351)
Q Consensus 221 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 296 (351)
. +++ .+.+|.+++.+... ++....+. .+...+..+.+.+++ .+++.+. ++.| ++....+.
T Consensus 217 ~-~~~-~~~~G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~-~~~~~g~-~g~i-~~S~DgG~---------- 280 (327)
T 2xbg_A 217 R-LWM-IVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPN-EVWLAGG-AGAL-LCSQDGGQ---------- 280 (327)
T ss_dssp C-EEE-EETTTEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSS-CEEEEES-TTCE-EEESSTTS----------
T ss_pred C-EEE-EeCCceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCC-EEEEEeC-CCeE-EEeCCCCc----------
Confidence 7 444 45678877764221 11111111 122458889999876 6666554 6666 33333200
Q ss_pred cCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeec
Q 018697 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
.+..+.........+.++.|.+++ .+++++.+|.|.-++-
T Consensus 281 ------tW~~~~~~~~~~~~~~~v~~~~~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 281 ------TWQQDVDVKKVPSNFYKILFFSPD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp ------SCEECGGGTTSSSCCCEEEEEETT--EEEEECSTTEEEEECC
T ss_pred ------ccEEcCccCCCCCCeEEEEEECCC--ceEEEcCCceEEEEcC
Confidence 022222111223457788887554 4666777898776653
No 287
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.24 E-value=0.0013 Score=53.93 Aligned_cols=272 Identities=11% Similarity=0.159 Sum_probs=162.0
Q ss_pred CcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCC
Q 018697 27 DHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLN 106 (351)
Q Consensus 27 ~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~ 106 (351)
++.++++-....++.+++.++++...+... ++-..-+ +.-.+|..+.++.- ...+++|+|++
T Consensus 34 ESDkyicVrE~~~~~~~VvIiDl~n~~~~~--Rrpi~Ad----sAIMnP~~~ViALr-----ag~~LQiFnle------- 95 (365)
T 2xzh_A 34 ESDKFICIREKVGEQAQVVIIDMNDPSNPI--RRPISAD----SAIMNPASKVIALK-----AGKTLQIFNIE------- 95 (365)
T ss_dssp EETTEEEEEEEETTEEEEEEEETTSTTSCE--EEECCCS----EEEECSSSSEEEEE-----ETTEEEEEETT-------
T ss_pred ecCceEEEEecCCCCCEEEEEECCCCCCcc--ccccccc----eeeeCCCccEEEEe-----cCCeEEEechH-------
Confidence 344566655556666788888888865532 2222222 33458876655543 25689999998
Q ss_pred CCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEe
Q 018697 107 SPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (351)
Q Consensus 107 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (351)
....+....- ...|.-=.|-.+.. +.+++ +..|+-|++.......+.+..+..--...|.....+++.++++..
T Consensus 96 --tK~klks~~~-~e~VvfWkWis~~~-L~lVT--~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~ 169 (365)
T 2xzh_A 96 --MKSKMKAHTM-TDDVTFWKWISLNT-VALVT--DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLT 169 (365)
T ss_dssp --TTEEEEEEEC-SSCEEEEEECSSSE-EEEEE--SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEE
T ss_pred --Hhhhhcceec-CCccEEEEecCCCe-EEEEc--CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEE
Confidence 4455555533 45666667776655 23333 578999999865555555554422223467778889999987765
Q ss_pred e---c----CCeEEEEEcccCCcCceeecce-eEEEEcCCC----CCcEEEEecC---CCeEEEEecccC--Ccc---ee
Q 018697 187 T---C----ESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTK----KKHLLVTAAD---ESGIHLWDLRML--KAP---IQ 246 (351)
Q Consensus 187 ~---~----d~~i~iwd~~~~~~~~~~~~~~-v~~~~~~~~----~~~~l~~~~~---dg~i~i~d~~~~--~~~---~~ 246 (351)
+ . .|.+.+|..+.+ ..+.+ .+| ..-..+-.+ ...+++.+.. .+.+++.++... +.+ .+
T Consensus 170 GI~~~~~~v~G~mQLYS~er~-~sQ~i-eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk 247 (365)
T 2xzh_A 170 GISAQQNRVVGAMQLYSVDRK-VSQPI-EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK 247 (365)
T ss_dssp EEEEETTEEEEEEEEEETTTT-EEEEE-CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCE
T ss_pred eEeccCCccceeEEEEeeccc-cccee-eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccc
Confidence 4 2 367788887753 22333 366 221222222 2224443332 268999998553 111 11
Q ss_pred E---eeC---CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEE
Q 018697 247 E---LPG---HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (351)
Q Consensus 247 ~---~~~---~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (351)
. +-. ..+-.-++..++.. .+++.-+.-|.|++||+++ +.++..-+-..+.|..-
T Consensus 248 ~vdi~fppea~~DFPVamqvs~ky-gviyviTK~G~ihlyDleT-------------------gt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 248 AVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLET-------------------GTCIYMNRISGETIFVT 307 (365)
T ss_dssp EEEECCCTTCTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTT-------------------CCEEEEEECCSSCEEEE
T ss_pred cceeeCCccccCCceEEEEecccC-CEEEEEeCCcEEEEEEccc-------------------CcEEEEeccCCCceEEe
Confidence 1 111 12334567777777 7888899999999999999 88887776666666655
Q ss_pred EeCCCCCceEEEeeeCCeEEEeecC
Q 018697 321 AWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 321 ~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
+-+..... ++.....|.|.--.++
T Consensus 308 a~~~~~~G-i~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 308 APHEATAG-IIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EEEGGGTE-EEEEETTCEEEEEEEC
T ss_pred cccCCCCc-EEEEcCCCEEEEEEEC
Confidence 54444332 4444567766655544
No 288
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=0.0016 Score=61.62 Aligned_cols=234 Identities=12% Similarity=0.100 Sum_probs=136.2
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeee-------eeccccceeEEEecCCCCCcEEE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA-------LDAHVGKINCVLWWSSGRHDKLV 138 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-------~~~h~~~v~~~~~~~~~~~~~~~ 138 (351)
..|.++...+++..-+.+ .++-|..++... ........ -......|.++...+++. +.+
T Consensus 313 ~~v~~i~~D~~g~lWigt-----~~~Gl~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWi 378 (781)
T 3v9f_A 313 ASARYIFQDSFNNIWIGT-----WGGGINFISNAP-------PTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWI 378 (781)
T ss_dssp SCEEEEEECSSCCEEEEE-----BSSCEEEECSSC-------CSCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEE
T ss_pred CeEEEEEEeCCCCEEEEe-----cCCeEEEeCCCC-------CcceeeccCccccccCCCCCcceEEEEEcCCCC--EEE
Confidence 467788777777555443 455677777551 11111110 011235689998888887 566
Q ss_pred EecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee---cce-eEEE
Q 018697 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE---HAH-VRNV 214 (351)
Q Consensus 139 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~-v~~~ 214 (351)
+..++-|..|+..+.. .... ..........|.++...+++. |.+|+.++.|..+|..+++...... ... |.++
T Consensus 379 gt~~~Gl~~~~~~~~~-~~~~-~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i 455 (781)
T 3v9f_A 379 GTDGGGINVFENGKRV-AIYN-KENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVF 455 (781)
T ss_dssp EEBSSCEEEEETTEEE-EECC------CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEE
T ss_pred EeCCCcEEEEECCCCe-EEEc-cCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEE
Confidence 6656678888876421 1111 111111234788888887665 5567776778889887654322111 112 8999
Q ss_pred EcCCCCCcEEEEecCCCeEEEEecccCCcceeEee-CC-----CCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCC
Q 018697 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-GH-----THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD 288 (351)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~-----~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 288 (351)
...+++. +.+ |+. +-|..||..+ .+ ...+. .. ...|.++...++| .+.+ |+.++-|..||...
T Consensus 456 ~~d~~g~-lwi-gt~-~Gl~~~~~~~-~~-~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~---- 524 (781)
T 3v9f_A 456 YEDKNKK-IWI-GTH-AGVFVIDLAS-KK-VIHHYDTSNSQLLENFVRSIAQDSEG-RFWI-GTFGGGVGIYTPDM---- 524 (781)
T ss_dssp EECTTSE-EEE-EET-TEEEEEESSS-SS-CCEEECTTTSSCSCSCEEEEEECTTC-CEEE-EESSSCEEEECTTC----
T ss_pred EECCCCC-EEE-EEC-CceEEEeCCC-Ce-EEecccCcccccccceeEEEEEcCCC-CEEE-EEcCCCEEEEeCCC----
Confidence 9998886 333 555 5688899775 32 22222 11 3578999999888 5444 44433477788765
Q ss_pred CCCCcccccCCcccccccceeec----cccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 289 ELPSESLVESPNQRANSLLNSYS----DYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
.+ +..+. -....|.++...++|. +.++.. +|.|..|+..
T Consensus 525 ---------------~~-~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T~-~Glv~~~d~~ 567 (781)
T 3v9f_A 525 ---------------QL-VRKFNQYEGFCSNTINQIYRSSKGQ-MWLATG-EGLVCFPSAR 567 (781)
T ss_dssp ---------------CE-EEEECTTTTCSCSCEEEEEECTTSC-EEEEET-TEEEEESCTT
T ss_pred ---------------Ce-EEEccCCCCCCCCeeEEEEECCCCC-EEEEEC-CCceEEECCC
Confidence 22 11221 1234688999888887 554443 6655777764
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.23 E-value=1.1e-05 Score=74.86 Aligned_cols=158 Identities=13% Similarity=0.043 Sum_probs=97.2
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCC---CCCcccccccccCcccceeeeEECCCCCcEEEe-ecCCeEEEEE
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCS---NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA-TCESSVQFWD 196 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd 196 (351)
..+..++|.+.+..++++-...+.|+.+++... .....+.... ......+++.+.+..|+.+ ...+.|.+++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~----~~~P~glavD~~~g~LY~tD~~~~~I~v~d 481 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----IQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 481 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSC----C--CCCEECCCSSSBCEECCTTTSCEEEEB
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCC----CCCcceEEEEeeCCcEEEEeccCCeEEEEe
Confidence 456788999877753444356789999998741 1111111111 1245678888666666655 4568899999
Q ss_pred cccCCcCceeecc-e-eEEEEcCCCCCcEEEEecCC-CeEEEEecccCCcceeEe-eCCCCceeEEEecCCCCCeEEEee
Q 018697 197 LRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 197 ~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~ 272 (351)
+........+... . ...++++|.+.+++++-... +.|.++++.. . ....+ ...-...+.|+|+|++..++++-+
T Consensus 482 ~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~-~~~~l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 482 TKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-V-DIYSLVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp SSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-C-CCCEESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred cCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-C-CeeEEEeCCCCCccEEEEeccCCEEEEEec
Confidence 8754332222211 2 78899999776455544333 7888888763 2 22222 222345678999998746666667
Q ss_pred CCCeEEEEEcCC
Q 018697 273 TDSTVNLWLVST 284 (351)
Q Consensus 273 ~dg~i~iwd~~~ 284 (351)
..+.|..+++..
T Consensus 560 ~~~~I~~~d~dG 571 (699)
T 1n7d_A 560 KLHSISSIDVNG 571 (699)
T ss_dssp TTTEEEEECSSS
T ss_pred CCCeEEEEccCC
Confidence 778899998864
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.19 E-value=7.2e-05 Score=69.24 Aligned_cols=220 Identities=8% Similarity=-0.044 Sum_probs=113.0
Q ss_pred eEEEEEcccccCCCCCCcceeeeeeec-cccceeEEEecCCCCCcEEEEe-cCCcEEEEEcCCCCCCcccccccccCccc
Q 018697 92 GAAIWQIPELYGQLNSPQLERIAALDA-HVGKINCVLWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
.+.+||... .++..+..+.. +.....++++..++. ++++++ .+..+.+||..+..-. ... .... ..
T Consensus 220 ~~~~yd~~t-------~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~v~~yd~~t~~W~--~~~-~~~~-~R 287 (656)
T 1k3i_A 220 LTSSWDPST-------GIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKKTSLYDSSSDSWI--PGP-DMQV-AR 287 (656)
T ss_dssp EEEEECTTT-------CCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTCEEEEEGGGTEEE--ECC-CCSS-CC
T ss_pred EEEEEeCCC-------CcEEeCcccCCCCCCccccccCCCCCC-EEEeCCCCCCceEEecCcCCcee--ECC-CCCc-cc
Confidence 577888762 23444443322 233344567778887 466665 4568999998854211 111 1111 11
Q ss_pred ceeeeEECCCCCcEEEee-cC-----CeEEEEEcccCCcCce-------eecceeEEEEcCCCCCcEEEEecCC------
Q 018697 170 YLSGGAWDPHDVNAVAAT-CE-----SSVQFWDLRSMGKTNS-------IEHAHVRNVDYDTKKKHLLVTAADE------ 230 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d------ 230 (351)
.-.+++..++++.++.|+ .+ ..+.+||..+.+-... +... -....+..++. +++.|+.+
T Consensus 288 ~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~-~~~~~~~~~~~-iyv~Gg~~g~~~~~ 365 (656)
T 1k3i_A 288 GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA-DKQGLYRSDNH-AWLFGWKKGSVFQA 365 (656)
T ss_dssp SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCC-CTTGGGTTTCS-CCEEECGGGCEEEC
T ss_pred cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccc-cccceeecCCc-eEEEECCCCcEEEe
Confidence 223445667888888887 34 5789999876542111 0000 00122334454 45555544
Q ss_pred ---CeEEEEecccCCcceeEeeCCC---------CceeEEEecC-CCCCeEEEeeCCC-----------eEEEEEcCCCC
Q 018697 231 ---SGIHLWDLRMLKAPIQELPGHT---------HWTWAVCCNP-EYDGFILSAGTDS-----------TVNLWLVSTSN 286 (351)
Q Consensus 231 ---g~i~i~d~~~~~~~~~~~~~~~---------~~v~~~~~~~-~~~~~l~s~~~dg-----------~i~iwd~~~~~ 286 (351)
..+..||... ..-......+. ..-.++.|.. ++ .+++.|+.++ .|.+||.....
T Consensus 366 ~~~~~v~~yd~~~-~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~ 443 (656)
T 1k3i_A 366 GPSTAMNWYYTSG-SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG-KILTFGGSPDYQDSDATTNAHIITLGEPGTSP 443 (656)
T ss_dssp CSSSEEEEEECST-TCEEEEEEECEETTEECCCCBTCEEEEEETTTT-EEEEECCBSSSSSSBCCCCEEEEECCSTTSCC
T ss_pred cCccceeeeecCC-cceeecCCccccccccCCCCCCCceEeccCCCC-eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC
Confidence 3567888775 22222221111 1223444443 45 7888887543 56677766510
Q ss_pred CCCCCCcccccCCcccccccce--eeccccceEEEEEeCCCCCceEEEeeeC-----------CeEEEeecCc
Q 018697 287 HDELPSESLVESPNQRANSLLN--SYSDYEDSVYGLAWSSREPWIFASLSYD-----------GRVVVESVKP 346 (351)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----------g~v~vw~~~~ 346 (351)
+..+. .+.. ...-.+....|+++ +++.|+.+ ..+.+||..+
T Consensus 444 -----------------W~~~~~~~mp~-~R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 444 -----------------NTVFASNGLYF-ARTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp -----------------EEEECTTCCSS-CCBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred -----------------eeEEccCCCCC-CcccCCeEECCCCC-EEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 11111 1111 11123445668888 88888754 4578888754
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.19 E-value=0.002 Score=56.20 Aligned_cols=237 Identities=5% Similarity=-0.045 Sum_probs=127.8
Q ss_pred eecCCCC--cceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcce-EEEEE
Q 018697 21 DVKADTD--HTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG-AAIWQ 97 (351)
Q Consensus 21 ~~~~~~~--~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~-i~vw~ 97 (351)
.+.++++ ..++++.... +.|+.++.. .+.+. .+.........+++++++. |+.+...+..+.. +...+
T Consensus 143 gvavd~~s~~g~Lyv~D~~----~~I~~id~~--~g~v~--~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQR----DAFRHVDFV--NQYVD--IKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp EEEECTTTTTCEEEEECBT----SCEEEEETT--TTEEE--EECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred eEEEccccCCCEEEEEeCC----CCEEEEECC--CCEEE--EeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 3444542 4455554322 455544442 23322 2333445688999999998 5554211111112 22222
Q ss_pred cccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEEC
Q 018697 98 IPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD 177 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 177 (351)
... .......+. .-.....+++.|+...++++...++.|+.++..++.....+..... ......++|+
T Consensus 214 ~~~--------~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~---~~~~~~ia~d 281 (433)
T 4hw6_A 214 RAS--------GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT---KGSNFHIVWH 281 (433)
T ss_dssp GGG--------TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC---CSSCEEEEEC
T ss_pred CCC--------Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC---CCCcccEEEe
Confidence 221 111011121 2234567889994443344445678899998875432122221111 1123469999
Q ss_pred CCCCcEEEee-cCCeEEEEEccc--CCcC--ceee---------c--------ceeEEEEc---------CCCCCcEEEE
Q 018697 178 PHDVNAVAAT-CESSVQFWDLRS--MGKT--NSIE---------H--------AHVRNVDY---------DTKKKHLLVT 226 (351)
Q Consensus 178 ~~~~~l~~~~-~d~~i~iwd~~~--~~~~--~~~~---------~--------~~v~~~~~---------~~~~~~~l~~ 226 (351)
|+++.|+.+. ..+.|+.++... +... ..+. . .+...+++ .+++. ++++
T Consensus 282 pdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyva 360 (433)
T 4hw6_A 282 PTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFC 360 (433)
T ss_dssp TTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEE
T ss_pred CCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEE
Confidence 9999666654 568899988652 2211 1110 0 01677888 67775 7777
Q ss_pred ecCCCeEEEEecccCCcceeEeeCC------------------CCceeEEEec-CCCCCeEEEeeCCCeEEEEEcC
Q 018697 227 AADESGIHLWDLRMLKAPIQELPGH------------------THWTWAVCCN-PEYDGFILSAGTDSTVNLWLVS 283 (351)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~~~~~~~~------------------~~~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~ 283 (351)
-..++.|+.++.. + .+.++.+. -.....|+++ +++ .++++-...+.|+.++++
T Consensus 361 D~~n~~I~~~~~~--G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g-~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 361 DRDSHTVRVLTPE--G-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRK-CFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ETTTTEEEEECTT--S-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTT-EEEEEEGGGTEEEEEEEC
T ss_pred ECCCCEEEEECCC--C-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCC-EEEEEeCCCCEEEEEecC
Confidence 7778899999853 3 34444322 1235678888 555 666666667788887764
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.18 E-value=0.0029 Score=57.92 Aligned_cols=217 Identities=11% Similarity=-0.012 Sum_probs=131.0
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeee-ccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALD-AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 167 (351)
....|+..++.. ......+. ..-..+..++|.+.+..++.+-..++.|..++++... ...+....
T Consensus 13 ~~~~I~~i~l~~---------~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~~~v~~~g---- 78 (628)
T 4a0p_A 13 RRADIRRISLET---------NNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-LEHVVEFG---- 78 (628)
T ss_dssp ETTEEEEEESSC---------TTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS----
T ss_pred eCCcEEEEECCC---------CCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-cEEEEeCC----
Confidence 445788888862 11111111 1234578999999877645555667899999987432 22222211
Q ss_pred ccceeeeEECCCCCcEEEee-cCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEe-cCCCeEEEEecccCC
Q 018697 168 LHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTA-ADESGIHLWDLRMLK 242 (351)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~ 242 (351)
.....++++.+.+..|+.+. ..+.|.+.++..... ..+.... ...++++|....++++- +..+.|...++..
T Consensus 79 ~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG-- 155 (628)
T 4a0p_A 79 LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG-- 155 (628)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--
T ss_pred CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC--
Confidence 12567888887777676654 568899999875432 2222122 89999999665455554 2357888888764
Q ss_pred cceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEe
Q 018697 243 APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAW 322 (351)
Q Consensus 243 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 322 (351)
.....+...-...+.|++++++.++..+-...+.|...|+.. ... ..+........++++
T Consensus 156 ~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG-------------------~~~-~v~~~~l~~P~glav 215 (628)
T 4a0p_A 156 SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG-------------------LNR-EVIADDLPHPFGLTQ 215 (628)
T ss_dssp CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS-------------------CSC-EEEEECCSCEEEEEE
T ss_pred CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC-------------------Cce-EEeeccCCCceEEEE
Confidence 233333334567789999998745556666678899999864 111 222222223456766
Q ss_pred CCCCCceEEEeeeCCeEEEeec
Q 018697 323 SSREPWIFASLSYDGRVVVESV 344 (351)
Q Consensus 323 ~~~~~~~l~s~~~dg~v~vw~~ 344 (351)
.. +. ++.+-...+.|...|.
T Consensus 216 ~~-~~-ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 216 YQ-DY-IYWTDWSRRSIERANK 235 (628)
T ss_dssp ET-TE-EEEEETTTTEEEEEET
T ss_pred EC-CE-EEEecCCCCEEEEEEC
Confidence 54 33 5666555677766663
No 293
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.14 E-value=0.0005 Score=57.24 Aligned_cols=191 Identities=14% Similarity=0.194 Sum_probs=115.3
Q ss_pred CCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCC----CCC--cEEEE-ec--CCcEE
Q 018697 76 FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS----GRH--DKLVS-ID--EENIF 146 (351)
Q Consensus 76 ~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~--~~~~~-~~--d~~v~ 146 (351)
....++++ ...+-+.+||+. ++.+..+.. +.++.+..-|. ++. +++++ .. +++|.
T Consensus 39 ~~s~ii~t----~k~~gL~Vydl~----------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~ 102 (355)
T 3amr_A 39 QNSKLITT----NKKSGLVVYSLD----------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE 102 (355)
T ss_dssp GGCEEEEE----ETTTEEEEEETT----------SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEE
T ss_pred CccEEEEE----cCCCCEEEEcCC----------CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEE
Confidence 34455554 466789999986 466666643 45566555552 221 24455 33 58999
Q ss_pred EEEcCCCCCCcccccc---cccCcccceeeeEE--CCCCC--cEEEeecCCeEEEEEcc-------cCCcCceeecce-e
Q 018697 147 LWSLDCSNKNAQVQSK---QSSGMLHYLSGGAW--DPHDV--NAVAATCESSVQFWDLR-------SMGKTNSIEHAH-V 211 (351)
Q Consensus 147 iwd~~~~~~~~~~~~~---~~~~~~~~v~~~~~--~~~~~--~l~~~~~d~~i~iwd~~-------~~~~~~~~~~~~-v 211 (351)
+|++............ ....-...++.+++ +|... ++++...+|.+..|++. +.+.++++..+. +
T Consensus 103 vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~ 182 (355)
T 3amr_A 103 IYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQT 182 (355)
T ss_dssp EEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCE
T ss_pred EEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCc
Confidence 9987522211111110 00011136778888 77543 57777888999999984 234556666555 8
Q ss_pred EEEEcCCCCCcEEEEecCCCeEEEEecccC----CcceeEee-CC-CCceeEEEe--cCCCCCeEEEee-CCCeEEEEEc
Q 018697 212 RNVDYDTKKKHLLVTAADESGIHLWDLRML----KAPIQELP-GH-THWTWAVCC--NPEYDGFILSAG-TDSTVNLWLV 282 (351)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~-~~-~~~v~~~~~--~~~~~~~l~s~~-~dg~i~iwd~ 282 (351)
..++..+... .|+.+-++..|..|+.+.. .+.+..+. ++ ...+..|++ .+++..+|++++ .+.+..+||.
T Consensus 183 EgcvvDd~~g-~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 183 EGMAADDEYG-RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEEETTTT-EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred ceEEEcCCCC-eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 8888988777 6777888877777775521 12333332 22 236788887 566533555555 5779999999
Q ss_pred C
Q 018697 283 S 283 (351)
Q Consensus 283 ~ 283 (351)
.
T Consensus 262 ~ 262 (355)
T 3amr_A 262 Q 262 (355)
T ss_dssp S
T ss_pred C
Confidence 7
No 294
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.14 E-value=0.00034 Score=63.56 Aligned_cols=168 Identities=10% Similarity=0.040 Sum_probs=99.0
Q ss_pred CcEEEEEcCCCCCCccccccccc-----CcccceeeeEEC-CCCC---cEEEeecCCeEEEEEcccCCcCceeecce---
Q 018697 143 ENIFLWSLDCSNKNAQVQSKQSS-----GMLHYLSGGAWD-PHDV---NAVAATCESSVQFWDLRSMGKTNSIEHAH--- 210 (351)
Q Consensus 143 ~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~-~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--- 210 (351)
+.|..+|..+++........... ....++. +... .+++ .++.++.+|.++++|.++++.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 57999999887765554332111 0011121 1221 3563 67778899999999999888664433210
Q ss_pred --------------------------------------------eEEEEcCCCCCcEEEEec------------------
Q 018697 211 --------------------------------------------VRNVDYDTKKKHLLVTAA------------------ 228 (351)
Q Consensus 211 --------------------------------------------v~~~~~~~~~~~~l~~~~------------------ 228 (351)
...++++|+.. ++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTG-LFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTC-CEEEEEECEEEEEEECCCCCCTTS
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCC-EEEEechhcceeeecccccccCCC
Confidence 11346666655 333322
Q ss_pred ---------------CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCc
Q 018697 229 ---------------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE 293 (351)
Q Consensus 229 ---------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 293 (351)
.+|.|..||+.+ ++.+-+.... .++..-.....+ .+++.++.|+.++.||.++
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~t-G~~~W~~~~~-~~~~~g~~~tag-glvf~g~~dg~l~A~D~~t--------- 516 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAG-NLVFTGTGDGYFKAFDAKS--------- 516 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTT-CCEEEEEEES-SCCCSCCEEETT-TEEEEECTTSEEEEEETTT---------
T ss_pred ceeccceeecCCCCCCcceEEEEECCC-CCEEEEecCC-CCCcccceEeCC-CEEEEECCCCcEEEEECCC---------
Confidence 357899999987 5555554422 222221122234 5777799999999999999
Q ss_pred ccccCCcccccccceeeccccceE-EEEEeCCCCCceEEEee
Q 018697 294 SLVESPNQRANSLLNSYSDYEDSV-YGLAWSSREPWIFASLS 334 (351)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~s~~ 334 (351)
++.+..++...... .-+.+..+|+.++++.+
T Consensus 517 ----------G~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 517 ----------GKELWKFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp ----------CCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ----------CCEEEEecCCCCcccCceEEEECCEEEEEEEc
Confidence 88887776533211 12566678875555443
No 295
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.10 E-value=0.0012 Score=60.03 Aligned_cols=167 Identities=11% Similarity=0.050 Sum_probs=94.6
Q ss_pred CcEEEEEcCCCCCCcccccccccC-----cccceeeeEEC-CCC---CcEEEeecCCeEEEEEcccCCcCceeecce---
Q 018697 143 ENIFLWSLDCSNKNAQVQSKQSSG-----MLHYLSGGAWD-PHD---VNAVAATCESSVQFWDLRSMGKTNSIEHAH--- 210 (351)
Q Consensus 143 ~~v~iwd~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~-~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--- 210 (351)
+.|..+|.++++............ ...++. +... .++ +.++.++.+|.++++|.++++.+.......
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 356 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVN 356 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcc
Confidence 478889998876554443322100 011111 1221 456 456667899999999999988665443110
Q ss_pred --------------------------------------eEEEEcCCCCCcEEEEe-------------------------
Q 018697 211 --------------------------------------VRNVDYDTKKKHLLVTA------------------------- 227 (351)
Q Consensus 211 --------------------------------------v~~~~~~~~~~~~l~~~------------------------- 227 (351)
-..++++|+.. ++++.
T Consensus 357 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 435 (599)
T 1w6s_A 357 VFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRE-LFFMGINHICMDWEPFMLPYKAGQFFVGAT 435 (599)
T ss_dssp SEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred cccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCC-EEEEeccccceeeecccccccCCcceeccc
Confidence 12456666655 33332
Q ss_pred --------c------CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCc
Q 018697 228 --------A------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE 293 (351)
Q Consensus 228 --------~------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 293 (351)
+ ..|.|..||+.+ ++.+-+... ..+...-.....+ .+++.++.|+.++.||.++
T Consensus 436 ~~~~~~p~~~~~~~~~~G~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~tag-g~vf~gt~dg~l~A~D~~t--------- 503 (599)
T 1w6s_A 436 LNMYPGPKGDRQNYEGLGQIKAYNAIT-GDYKWEKME-RFAVWGGTMATAG-DLVFYGTLDGYLKARDSDT--------- 503 (599)
T ss_dssp EEEEECTTSBTTTTBCCEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETT-TEEEEECTTSEEEEEETTT---------
T ss_pred ceeccCCcCCcccCCCcCeEEEEECCC-CCEEeEecC-CCCccCcceEecC-CEEEEECCCCeEEEEECCC---------
Confidence 1 347788888887 555544431 1222211122234 5777799999999999999
Q ss_pred ccccCCcccccccceeeccccce-EEEEEeCCCCCceEEEe
Q 018697 294 SLVESPNQRANSLLNSYSDYEDS-VYGLAWSSREPWIFASL 333 (351)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~s~ 333 (351)
++.+..++-.... ..-+.+..+|+.++++.
T Consensus 504 ----------G~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 504 ----------GDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp ----------CCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred ----------CCEEEEeeCCCCcEeccEEEEeCCEEEEEEE
Confidence 8887777533211 12245556777555443
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.08 E-value=0.0027 Score=58.12 Aligned_cols=224 Identities=10% Similarity=-0.024 Sum_probs=130.1
Q ss_pred CCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeecc
Q 018697 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (351)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h 119 (351)
..+.|+.+++...... .......-..+..++|++.+..|+.+ .-..+.|..+++.. .......+...
T Consensus 16 ~~~~I~~i~~~~~~~~--~~~~~~~~~~~~~ld~~~~~~~ly~s---D~~~~~I~r~~~~g--------~~~~~~v~~~~ 82 (619)
T 3s94_A 16 NRRDLRLVDATNGKEN--ATIVVGGLEDAAAVDFVFSHGLIYWS---DVSEEAIKRTEFNK--------TESVQNVVVSG 82 (619)
T ss_dssp CSSBEEEECCC-----------CBCCSCEEEEEEETTTTEEEEE---ETTTTEEEEEEC-------------CEEEECSS
T ss_pred ccccEEEEeCCCCcce--EEEEEcCCCceEEEEEEeCCCEEEEE---ECCCCeEEEEEccC--------CCceEEEEeCC
Confidence 3567777777653211 11222334567899999988887776 24567788888762 11112223223
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec--CCeEEEEEc
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDL 197 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~ 197 (351)
-.....+++.+.+..++++-...+.|.+.+++... ...+... ......++++.|.+..|+.+.. .+.|...++
T Consensus 83 ~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~----~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~ 157 (619)
T 3s94_A 83 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQ----ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGM 157 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS----SCSCCCCEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeC----CCCCCceEEEecCCCeEEEeccCCCCEEEEEEC
Confidence 35678999999777545555678899999998432 2222211 1235789999998777777653 467777776
Q ss_pred ccCCcCceeecce---eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCC
Q 018697 198 RSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274 (351)
Q Consensus 198 ~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 274 (351)
... ....+.... ...+++++++..++++-...+.|..+|+.. ........+.......|++..+ .++.+-...
T Consensus 158 dG~-~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~ 233 (619)
T 3s94_A 158 DGS-SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFED--ILYWTDWST 233 (619)
T ss_dssp TSC-SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC-CEEC---------CCCEEESSS--EEEEECTTT
T ss_pred CCC-ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC-CccEEEEeCCCCCceEEEEeCC--EEEEecCCC
Confidence 643 333332112 889999997765667666778999999864 2211111211222346666543 455666667
Q ss_pred CeEEEEEcCCC
Q 018697 275 STVNLWLVSTS 285 (351)
Q Consensus 275 g~i~iwd~~~~ 285 (351)
+.|...|..++
T Consensus 234 ~~V~~~d~~tg 244 (619)
T 3s94_A 234 HSILACNKYTG 244 (619)
T ss_dssp CSEEEEESSSC
T ss_pred CEEEEEECCCC
Confidence 78888887664
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.00095 Score=58.70 Aligned_cols=158 Identities=9% Similarity=0.005 Sum_probs=96.9
Q ss_pred ceeEEEecCC-CCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEE-------CCCCCcEEEeecCC---
Q 018697 122 KINCVLWWSS-GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW-------DPHDVNAVAATCES--- 190 (351)
Q Consensus 122 ~v~~~~~~~~-~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~--- 190 (351)
....|+|.|. ...++++-...+.|++.|+.+.. ...+.. ...........++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-v~~l~~-~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-LSSPLN-INTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-EEEEEC-CTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-EEEEEc-cCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 3568899984 55434444444678888887532 222221 11112335889999 99999777776543
Q ss_pred ----eEEEEEccc-CCcC-----ceeec-ceeEEEEcCCCCCcEEEEecCCCeEEEEecc-------cCCcc--------
Q 018697 191 ----SVQFWDLRS-MGKT-----NSIEH-AHVRNVDYDTKKKHLLVTAADESGIHLWDLR-------MLKAP-------- 244 (351)
Q Consensus 191 ----~i~iwd~~~-~~~~-----~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~-------~~~~~-------- 244 (351)
.|.+++... +... ..+.. .+...++++|++.+++++-..++.|..+|+. . +..
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~t-g~~~tp~~~~~ 296 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKN-GGSWDPIVKNN 296 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHT-TCCCCCBGGGC
T ss_pred ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccC-ceeeccccccc
Confidence 366666443 2222 12221 1277889999766678888888999999987 3 221
Q ss_pred ---eeE-ee-CCCCceeEEEecCCCCC-eEEEeeCCCeEEEEEcC
Q 018697 245 ---IQE-LP-GHTHWTWAVCCNPEYDG-FILSAGTDSTVNLWLVS 283 (351)
Q Consensus 245 ---~~~-~~-~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~iwd~~ 283 (351)
... +. +.......|+|+|+| . ++++-.....|+.++..
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G-~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTG-KYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTS-SEEEEEETTTTEEEEEEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCC-CEEEEEeCCCCEEEEEecC
Confidence 112 21 223456789999999 6 45555667788887654
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.05 E-value=0.0017 Score=59.47 Aligned_cols=181 Identities=10% Similarity=-0.013 Sum_probs=108.0
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 168 (351)
....|+..++.. .......+...-..+..++|++.+..++++-...+.|..++++.......+.... .
T Consensus 16 ~~~~I~~i~~~~--------~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~----~ 83 (619)
T 3s94_A 16 NRRDLRLVDATN--------GKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG----L 83 (619)
T ss_dssp CSSBEEEECCC-----------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSS----C
T ss_pred ccccEEEEeCCC--------CcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCC----C
Confidence 456788888762 1101111222334577899999777644444557889999887532112222211 1
Q ss_pred cceeeeEECCCCCcEEEee-cCCeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEEec-CCCeEEEEecccCCc
Q 018697 169 HYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLKA 243 (351)
Q Consensus 169 ~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~ 243 (351)
....++++.+.+..|+.+. ..+.|.+.++..... ..+.... ...++++|.+.+++++-- ..+.|...++.- .
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG--~ 160 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--S 160 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS--C
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC--C
Confidence 2678899998777676664 578999999875433 2332122 889999998664555542 346777777763 2
Q ss_pred ceeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 244 PIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 244 ~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
....+ ...-...+.|++++++.+++++-...+.|...|+..
T Consensus 161 ~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 161 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 23333 233456789999997645556656677888888764
No 299
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.04 E-value=0.0047 Score=52.72 Aligned_cols=271 Identities=12% Similarity=0.167 Sum_probs=164.2
Q ss_pred cceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCC
Q 018697 28 HTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNS 107 (351)
Q Consensus 28 ~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~ 107 (351)
+.++++-....++.+++.++++...+... ++-. .--+.-.+|..+.++.- ...++.|+|++
T Consensus 34 SDkyicVrE~~~~~~~vvIiDl~~~~~~~--rrpi----~AdsAIMnP~~~iiALr-----ag~~lQiFnle-------- 94 (494)
T 1bpo_A 34 SDKFICIREKVGEQAQVVIIDMNDPSNPI--RRPI----SADSAIMNPASKVIALK-----AGKTLQIFNIE-------- 94 (494)
T ss_dssp ETTEEEEEECCTTCCEEEEEETTSTTSCE--EEEC----CCSEEEECSSSSCEEEE-----ETTEEEEEETT--------
T ss_pred cCceEEEEecCCCCCeEEEEECCCCCcce--eccc----ccceeeeCCCCcEEEEe-----cCCeEEEEchH--------
Confidence 44566555556677788888888865532 2111 12244568877655553 35689999998
Q ss_pred CcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee
Q 018697 108 PQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187 (351)
Q Consensus 108 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (351)
....+....- ...|.-=.|-.+.. +.++ .+..|+-|++.......+++..+..-....|.....+++.++++..+
T Consensus 95 -~K~klks~~~-~e~VvfWkWis~~~-l~lV--T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 169 (494)
T 1bpo_A 95 -MKSKMKAHTM-TDDVTFWKWISLNT-VALV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (494)
T ss_dssp -TTEEEEEEEC-SSCCCEEEEEETTE-EEEE--CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEE
T ss_pred -Hhhhhcceec-CCCceEEEecCCCe-EEEE--cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEe
Confidence 4455555533 34566667766654 2333 35789999998655555555544222234677788899999877554
Q ss_pred ---c----CCeEEEEEcccCCcCceeecce---eEEEEcC--CCCCcEEEEecC---CCeEEEEecccC--Cc-c--eeE
Q 018697 188 ---C----ESSVQFWDLRSMGKTNSIEHAH---VRNVDYD--TKKKHLLVTAAD---ESGIHLWDLRML--KA-P--IQE 247 (351)
Q Consensus 188 ---~----d~~i~iwd~~~~~~~~~~~~~~---v~~~~~~--~~~~~~l~~~~~---dg~i~i~d~~~~--~~-~--~~~ 247 (351)
. .|.+.+|..+.+ ....++ +| ...+.+. +....+++.+.. .+.++|.++... +. + .+.
T Consensus 170 I~~~~~~v~G~mQLYS~er~-~sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~ 247 (494)
T 1bpo_A 170 ISAQQNRVVGAMQLYSVDRK-VSQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKA 247 (494)
T ss_dssp EEEETTEEEEEEEEEESTTC-CEEEEC-CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEE
T ss_pred ecccCCcccceEEEeecccc-ccchhe-eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCcccee
Confidence 2 367888888754 223333 66 2223222 111224444443 378999998653 11 1 111
Q ss_pred ee------CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEE
Q 018697 248 LP------GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLA 321 (351)
Q Consensus 248 ~~------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 321 (351)
.. .-.+-..++..++.. .+++.-+.-|.|++||+.+ +.++..-+-..++|..-+
T Consensus 248 vdv~fppe~~~DFPvamqvs~ky-gviyviTK~G~i~lyDleT-------------------gt~i~~nrIs~~~iF~t~ 307 (494)
T 1bpo_A 248 VDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLET-------------------GTCIYMNRISGETIFVTA 307 (494)
T ss_dssp EECCCCTTSTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTT-------------------CCEEEEEECCSSCEEEEE
T ss_pred eeeeCCcccccCceeEEEecccC-CEEEEEecCceEEEEeccc-------------------ceeeeeecccCCceEEec
Confidence 11 112334567778877 7888899999999999999 888877766666676555
Q ss_pred eCCCCCceEEEeeeCCeEEEeecC
Q 018697 322 WSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 322 ~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
-+..... ++.....|.|.--.++
T Consensus 308 ~~~~~~G-i~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 308 PHEATAG-IIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EETTTTE-EEEEETTCEEEEEEEC
T ss_pred ccCCCCc-EEEEccCceEEEEEEc
Confidence 5554442 4455567776655554
No 300
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.03 E-value=0.0047 Score=52.31 Aligned_cols=235 Identities=9% Similarity=0.033 Sum_probs=125.3
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee---ccccceeEEEecCC---CCCcEEE
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD---AHVGKINCVLWWSS---GRHDKLV 138 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~~~~~ 138 (351)
-.....++|.|+++.+++ ..++.|++++.. .. +.+..+. ........|+++|+ +..++++
T Consensus 28 l~~P~~ia~~pdG~l~V~-----e~~g~I~~~d~~--------G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-----ERPGRLVLISPS--------GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-----ETTTEEEEECSS--------CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCCeEEEEcCCCeEEEE-----eCCCEEEEEeCC--------Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEE
Confidence 356789999999875554 245888888632 11 2222221 22356789999998 5544444
Q ss_pred Eec---C----CcEEEEEcCCCC-CC---cccccccccCcccceeeeEECCCCCcEEEeec-------------CCeEEE
Q 018697 139 SID---E----ENIFLWSLDCSN-KN---AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-------------ESSVQF 194 (351)
Q Consensus 139 ~~~---d----~~v~iwd~~~~~-~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~i 194 (351)
-.. + ..|..|+..... .. ..++.............++|.|++...++.+. .|.|.-
T Consensus 94 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~r 173 (354)
T 3a9g_A 94 ASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILR 173 (354)
T ss_dssp EEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEE
T ss_pred EeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEE
Confidence 342 3 567777776431 11 11111111111124577999999975555432 245665
Q ss_pred EEcccCC-------cCceeecce--eEEEEcCC-CCCcEEEEecCCC---eEEEEeccc---------------CCccee
Q 018697 195 WDLRSMG-------KTNSIEHAH--VRNVDYDT-KKKHLLVTAADES---GIHLWDLRM---------------LKAPIQ 246 (351)
Q Consensus 195 wd~~~~~-------~~~~~~~~~--v~~~~~~~-~~~~~l~~~~~dg---~i~i~d~~~---------------~~~~~~ 246 (351)
++....- ....+..++ ...++|+| ++. ++++-.... .|.+..... ...++.
T Consensus 174 i~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 252 (354)
T 3a9g_A 174 VDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGV-MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVI 252 (354)
T ss_dssp ECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCC-EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred EcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCC-EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEe
Confidence 6654220 112222233 78999999 565 555433222 244332110 012333
Q ss_pred EeeCCCCceeEEEec-------CCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccc--ee-eccccce
Q 018697 247 ELPGHTHWTWAVCCN-------PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL--NS-YSDYEDS 316 (351)
Q Consensus 247 ~~~~~~~~v~~~~~~-------~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~ 316 (351)
.+.........++|. .+| .++++.-..+.|...++... +... .. +......
T Consensus 253 ~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~------------------g~~~~~~~~~~~~~~r 313 (354)
T 3a9g_A 253 DTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDN------------------MEVRKISTFFKNVFGR 313 (354)
T ss_dssp ECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGG------------------GCEEEEEEECTTTSCC
T ss_pred ecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCC------------------CcccceeeeccCCCCC
Confidence 331122356778873 456 67777666778888887641 1111 11 2222346
Q ss_pred EEEEEeCCCCCceEEEee
Q 018697 317 VYGLAWSSREPWIFASLS 334 (351)
Q Consensus 317 v~~~~~~~~~~~~l~s~~ 334 (351)
+..+++.|||. ++++..
T Consensus 314 p~~v~~~pDG~-lyv~~~ 330 (354)
T 3a9g_A 314 LRDVVIDDDGG-ILISTS 330 (354)
T ss_dssp EEEEEECTTSC-EEEEEC
T ss_pred eeEEEECCCCc-EEEEEe
Confidence 88999999998 565553
No 301
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.99 E-value=0.0011 Score=60.19 Aligned_cols=76 Identities=14% Similarity=0.068 Sum_probs=50.1
Q ss_pred eeEECCCCCcEEEeec--------------------C----CeEEEEEcccCCcCceeecce-----------eEEEEcC
Q 018697 173 GGAWDPHDVNAVAATC--------------------E----SSVQFWDLRSMGKTNSIEHAH-----------VRNVDYD 217 (351)
Q Consensus 173 ~~~~~~~~~~l~~~~~--------------------d----~~i~iwd~~~~~~~~~~~~~~-----------v~~~~~~ 217 (351)
.++++|+...++++.. | +.|.-+|.++++.+..++..+ ..-+...
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~ 329 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK 329 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeee
Confidence 3566777777776653 2 589999999999887775321 1111111
Q ss_pred -CCCC--cEEEEecCCCeEEEEecccCCcceeEee
Q 018697 218 -TKKK--HLLVTAADESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 218 -~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (351)
.+|+ .+++.++.+|.++++|.++ ++++..+.
T Consensus 330 ~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~ 363 (582)
T 1flg_A 330 AKDGKIVKATAHADRNGFFYVVDRSN-GKLQNAFP 363 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTT-CCEEEEEE
T ss_pred cCCCCEEEEEEEECCCceEEEEECCC-CCEecccc
Confidence 3553 2678899999999999887 55555443
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.92 E-value=0.0027 Score=52.87 Aligned_cols=204 Identities=10% Similarity=0.090 Sum_probs=117.6
Q ss_pred CCCCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCC----CCc--eEEEEeecCC--cceEEE
Q 018697 24 ADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF----DQR--IFSTVFSTGE--SYGAAI 95 (351)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~----~~~--l~~~~~~~~~--d~~i~v 95 (351)
.++...+ ++|+. ..+.+.++++. ++.+. .+. .+.++.+..-|. ++. ++++. ... +++|++
T Consensus 36 ~dp~~s~-ii~t~---k~~gL~Vydl~--G~~l~--~~~--~g~~nnVD~r~~~~l~g~~~dla~as--~R~~~~n~l~v 103 (355)
T 3amr_A 36 KTPQNSK-LITTN---KKSGLVVYSLD--GKMLH--SYN--TGKLNNVDIRYDFPLNGKKVDIAAAS--NRSEGKNTIEI 103 (355)
T ss_dssp SCGGGCE-EEEEE---TTTEEEEEETT--SCEEE--EEC--CSCEEEEEEEEEEEETTEEEEEEEEE--ECSTTCCEEEE
T ss_pred CCCCccE-EEEEc---CCCCEEEEcCC--CcEEE--Ecc--CCCcccEEEecccccCCceEeEEEEe--CCCCCCCeEEE
Confidence 4444444 77764 34678888883 23222 222 256666666552 222 33332 344 678999
Q ss_pred EEcccccCCCCCCcceeeeeeec------cc-cceeEEEe--cCCC-CCcEEEEecCCcEEEEEcCCC---CCCcccccc
Q 018697 96 WQIPELYGQLNSPQLERIAALDA------HV-GKINCVLW--WSSG-RHDKLVSIDEENIFLWSLDCS---NKNAQVQSK 162 (351)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~------h~-~~v~~~~~--~~~~-~~~~~~~~~d~~v~iwd~~~~---~~~~~~~~~ 162 (351)
|++.. ....+..+.. .. ..+..+++ +|.. ...++++..+|.+..|++... ....+....
T Consensus 104 f~iDp--------~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 104 YAIDG--------KNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp EEECT--------TTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEECC--------CCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 98851 1122333311 11 45667777 7754 333566677899999998531 111122111
Q ss_pred cccCcccceeeeEECCCCCcEEEeecCCeEEEEEccc-----CCcCceeecce----eEEEEc--CCCCC-cEEEEecCC
Q 018697 163 QSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS-----MGKTNSIEHAH----VRNVDY--DTKKK-HLLVTAADE 230 (351)
Q Consensus 163 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----~~~~~~~~~~~----v~~~~~--~~~~~-~~l~~~~~d 230 (351)
.. ....+..+...+....|+++-.+..|..+|.+. ++.+..+..++ +..|++ .++++ ++++++-.+
T Consensus 176 f~--lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 176 FK--MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp EE--CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred ec--CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC
Confidence 11 123678888998888999999887777777542 22332222232 677777 55555 577777678
Q ss_pred CeEEEEecccCCcceeEee
Q 018697 231 SGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 231 g~i~i~d~~~~~~~~~~~~ 249 (351)
.+..+||.+...+.+..|.
T Consensus 254 ~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 254 SSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp TEEEEEESSTTCCEEEEEE
T ss_pred CEEEEEECCCCCcEEEEEE
Confidence 8999999974355566664
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.91 E-value=0.00081 Score=55.48 Aligned_cols=153 Identities=8% Similarity=0.127 Sum_probs=99.9
Q ss_pred ceeeeEECCCCCcEEEee-cCCeEEEEEcccCCcCc-eeec----c----eeEEEEc---CCCCCcEEEEec--------
Q 018697 170 YLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTN-SIEH----A----HVRNVDY---DTKKKHLLVTAA-------- 228 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~-~~~~----~----~v~~~~~---~~~~~~~l~~~~-------- 228 (351)
...++.|++....++.++ ..+.|..||...+.... .+.. + ++..+.| .|+++ ++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEccccccccc
Confidence 456789988777777776 78999999987553222 2221 1 1789999 68876 666433
Q ss_pred -----CCCeEEEEecc---cCCcceeEee--C-----------CCCceeEEEecCCCCCeEEEeeCC-CeEEEEEcCCCC
Q 018697 229 -----DESGIHLWDLR---MLKAPIQELP--G-----------HTHWTWAVCCNPEYDGFILSAGTD-STVNLWLVSTSN 286 (351)
Q Consensus 229 -----~dg~i~i~d~~---~~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~ 286 (351)
.+..|..||+. + ++.+.... . -......++..++| +..++++.- +.|...+..-
T Consensus 93 g~~~~g~~~v~~~Dl~~~~t-g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~~~I~rV~pdG-- 168 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSEN-SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGMPAIARVSADG-- 168 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTT-CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESSCEEEEECTTS--
T ss_pred ccccCCCCEEEEEcCCcCCC-CCEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCCCeEEEEeCCC--
Confidence 25789999998 5 33443332 1 11347899999999 888888877 7766555543
Q ss_pred CCCCCCcccccCCcccccccceee------ccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 287 HDELPSESLVESPNQRANSLLNSY------SDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+.+..+ .......+.|+++|+|..+++..+ +|.|..+|+..
T Consensus 169 ------------------~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 ------------------KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp ------------------CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred ------------------CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 212211 111223678999999985555555 99999999763
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.89 E-value=0.0048 Score=51.92 Aligned_cols=190 Identities=9% Similarity=0.065 Sum_probs=106.0
Q ss_pred ceeEEEecCCCCCcEEEEe-------------cCCcEEEEEcCCCCCCccccccc---ccCcccceeeeEECC--CCC-c
Q 018697 122 KINCVLWWSSGRHDKLVSI-------------DEENIFLWSLDCSNKNAQVQSKQ---SSGMLHYLSGGAWDP--HDV-N 182 (351)
Q Consensus 122 ~v~~~~~~~~~~~~~~~~~-------------~d~~v~iwd~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~--~~~-~ 182 (351)
..-.+...|+|. +++++ .+|.|.++|+++.......+... .....-....+.+.+ ++. +
T Consensus 51 G~EDi~~~~~G~--~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILPNGL--AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECTTSE--EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcCCCe--EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 345666778765 45554 68999999998432221111111 111122455666644 343 4
Q ss_pred EEEee---cCCeEEEEEcccCCcCc----eeecce---eEEEEcCCCCCcEEEEec-----------------CCCeEEE
Q 018697 183 AVAAT---CESSVQFWDLRSMGKTN----SIEHAH---VRNVDYDTKKKHLLVTAA-----------------DESGIHL 235 (351)
Q Consensus 183 l~~~~---~d~~i~iwd~~~~~~~~----~~~~~~---v~~~~~~~~~~~~l~~~~-----------------~dg~i~i 235 (351)
|+++. .+..|.+|++....... .+.... .+.+++.++|. ++++.. ..|.|..
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEE
Confidence 55553 25788888887543222 222111 89999999997 555543 1245555
Q ss_pred EecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccc
Q 018697 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYED 315 (351)
Q Consensus 236 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (351)
+|.. + +..+...-...+.++|+|++..++++-+..+.|..|++..... ......+ ....
T Consensus 208 ~d~~---~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~----------------l~~~~~~-~~~g 266 (355)
T 3sre_A 208 YSPN---D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT----------------LTPLRVL-SFDT 266 (355)
T ss_dssp ECTT---C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC----------------EEEEEEE-ECSS
T ss_pred EECC---e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc----------------EecCEEE-eCCC
Confidence 5542 2 3333323345689999999944445556678999999864100 1111122 1234
Q ss_pred eEEEEEeCC-CCCceEEEeeeC
Q 018697 316 SVYGLAWSS-REPWIFASLSYD 336 (351)
Q Consensus 316 ~v~~~~~~~-~~~~~l~s~~~d 336 (351)
....++..+ +|. +.+++..+
T Consensus 267 ~PDGi~vD~e~G~-lwva~~~~ 287 (355)
T 3sre_A 267 LVDNISVDPVTGD-LWVGCHPN 287 (355)
T ss_dssp EEEEEEECTTTCC-EEEEEESC
T ss_pred CCceEEEeCCCCc-EEEEecCC
Confidence 567888998 587 66655433
No 305
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.88 E-value=0.0089 Score=50.57 Aligned_cols=243 Identities=11% Similarity=0.035 Sum_probs=123.8
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeee----eeccccceeEEEecCC---CCCcEEE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA----LDAHVGKINCVLWWSS---GRHDKLV 138 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~~~~~~~---~~~~~~~ 138 (351)
...+.|+|.|+++.|+++ ...+.|++++.... ....+.. ..........++++|+ +..++++
T Consensus 18 ~~P~~i~~~pdG~~l~V~----e~~G~i~~~~~~g~-------~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT----LRGGELRHWQAGKG-------LSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SSEEEEEECSTTCCEEEE----ETTTEEEEEETTTE-------ECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCcEEEEEcCCCCEEEEE----eCCceEEEEeCCCc-------eeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 456799999999834443 35678888874310 0011111 1122345689999996 5544444
Q ss_pred Eec-------CCcEEEEEcCCCCC----Ccccccccc--cCcccceeeeEECCCCCcEEEeec-------------CCeE
Q 018697 139 SID-------EENIFLWSLDCSNK----NAQVQSKQS--SGMLHYLSGGAWDPHDVNAVAATC-------------ESSV 192 (351)
Q Consensus 139 ~~~-------d~~v~iwd~~~~~~----~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i 192 (351)
-.. ...|..|++..... ...++.... .........++|.|++...++.+. .|.|
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEE
Confidence 332 23566666653211 111111110 011123567999999965444332 2467
Q ss_pred EEEEcccCC------------cCceeecce--eEEEEcCC-CCCcEEEEecC-CC--eEEEEecc--------c------
Q 018697 193 QFWDLRSMG------------KTNSIEHAH--VRNVDYDT-KKKHLLVTAAD-ES--GIHLWDLR--------M------ 240 (351)
Q Consensus 193 ~iwd~~~~~------------~~~~~~~~~--v~~~~~~~-~~~~~l~~~~~-dg--~i~i~d~~--------~------ 240 (351)
.-++....- ....+..++ ...++|+| ++. ++++-.. ++ .|.+.... .
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~ 245 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYS 245 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTT
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCC
Confidence 666765321 122333333 88999999 565 4443221 11 22221100 0
Q ss_pred --------------CCcceeEeeCCCCceeEEEecC-------CCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCC
Q 018697 241 --------------LKAPIQELPGHTHWTWAVCCNP-------EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESP 299 (351)
Q Consensus 241 --------------~~~~~~~~~~~~~~v~~~~~~~-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 299 (351)
...++..+.. ......+.|.. +| .++++.-..+.|...++..
T Consensus 246 ~~~~~~~~~~~~~~~~~P~~~~~~-~~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~--------------- 308 (353)
T 2g8s_A 246 GFKIPEAKGEIVAGTEQPVFYWKD-SPAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNG--------------- 308 (353)
T ss_dssp SSCCTTCCBSSCTTSCCCSEEESS-CCCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEET---------------
T ss_pred CCccCcccCCCCCCccCCeEEeCC-CcCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCC---------------
Confidence 0112223332 23456777753 35 6677666677777777654
Q ss_pred cccccccce---eeccccceEEEEEeCCCCCceEEE-eeeCCeEEEeec
Q 018697 300 NQRANSLLN---SYSDYEDSVYGLAWSSREPWIFAS-LSYDGRVVVESV 344 (351)
Q Consensus 300 ~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~s-~~~dg~v~vw~~ 344 (351)
+..+. .+......+..+++.|+|. ++++ -..+| +||.+
T Consensus 309 ----~~~~~~~~~~~~~~~rp~~v~~~pdG~-lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 309 ----DKVTEDGRILTDRGQRIRDVRTGPDGY-LYVLTDESSG--ELLKV 350 (353)
T ss_dssp ----TEEEEEEEESGGGCCCEEEEEECTTSC-EEEEECSTTE--EEEEE
T ss_pred ----CeEeeeEEcccCCCCceeEEEECCCCc-EEEEEeCCCC--EEEEE
Confidence 21111 1122234689999999998 5554 32345 45554
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.87 E-value=0.0052 Score=51.70 Aligned_cols=182 Identities=7% Similarity=0.046 Sum_probs=103.4
Q ss_pred CcceEEEEEcccccCCCCCCcceeeeeeec-----cccceeEEEecC--CCC-CcEEEEec--CCcEEEEEcCCCCCCcc
Q 018697 89 ESYGAAIWQIPELYGQLNSPQLERIAALDA-----HVGKINCVLWWS--SGR-HDKLVSID--EENIFLWSLDCSNKNAQ 158 (351)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~--~~~-~~~~~~~~--d~~v~iwd~~~~~~~~~ 158 (351)
.+|.|.++|..+.. .+.+.+. +.+ ..-....+.+.+ ++. +++++-.. +.+|.+|+++.......
T Consensus 81 ~~G~I~~~d~~~~~-----~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~ 154 (355)
T 3sre_A 81 KSGKILLMDLNEKE-----PAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLL 154 (355)
T ss_dssp -CCEEEEEETTSSS-----CCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEE
T ss_pred CCCeEEEEecCCCC-----CceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEE
Confidence 57889999976211 1112222 222 233566777755 343 33444322 57888988875443333
Q ss_pred cccccccCcccceeeeEECCCCCcEEEee-----------------cCCeEEEEEcccCCcCceeecce--eEEEEcCCC
Q 018697 159 VQSKQSSGMLHYLSGGAWDPHDVNAVAAT-----------------CESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTK 219 (351)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~--v~~~~~~~~ 219 (351)
.............+++.+.++|...++.. ..|.|..+|. ++ ...+..+- .+.++|+|+
T Consensus 155 ~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spD 231 (355)
T 3sre_A 155 HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPD 231 (355)
T ss_dssp EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTT
T ss_pred EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCC
Confidence 32222212234678899999888666543 1245555554 32 22222122 899999999
Q ss_pred CCcEEEEecCCCeEEEEecccCCcc--eeEeeCCCCceeEEEecC-CCCCeEEEeeCCC-eEEEEE
Q 018697 220 KKHLLVTAADESGIHLWDLRMLKAP--IQELPGHTHWTWAVCCNP-EYDGFILSAGTDS-TVNLWL 281 (351)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg-~i~iwd 281 (351)
++.++++-+..+.|+.|++...+.. .+.+. .....-.+++.+ +| .+.+++..++ .|..|+
T Consensus 232 g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G-~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 232 GKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTG-DLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTC-CEEEEEESCHHHHHSCC
T ss_pred CCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCC-cEEEEecCCceEEEEEC
Confidence 9866776777889999998743321 12332 245667888998 58 7766665442 343343
No 307
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.81 E-value=0.014 Score=57.34 Aligned_cols=271 Identities=11% Similarity=0.161 Sum_probs=151.0
Q ss_pred CCcceEEEeeeeeCCCCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCC
Q 018697 26 TDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL 105 (351)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~ 105 (351)
-++.++++-....++.+++.++++...+... + .+-.--+.-.+|..+.++.- ...++.|+|++
T Consensus 32 ~eSDkyicvre~~~~~~~vvIidl~~~~~~~--r----rpi~AdsAIMnP~~~iiALr-----ag~~lQiFnl~------ 94 (1630)
T 1xi4_A 32 MESDKFICIREKVGEQAQVVIIDMNDPSNPI--R----RPISADSAIMNPASKVIALK-----AGKTLQIFNIE------ 94 (1630)
T ss_pred eecCceEEEEecCCCCceEEEEECCCCCCcc--c----ccccchhhccCCCcceEEEe-----cCCeEEEeehH------
Confidence 3455566655555666788888888754321 1 11122244567876555442 35689999998
Q ss_pred CCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEE
Q 018697 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA 185 (351)
Q Consensus 106 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 185 (351)
....+....- ..+|.-=.|-.... +.+++ +..|+-|++.....+.+++..+..--...|..-..+++.++++.
T Consensus 95 ---~k~klks~~~-~e~VvfWkWis~~~-l~lVT--~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l 167 (1630)
T 1xi4_A 95 ---MKSKMKAHTM-TDDVTFWKWISLNT-VALVT--DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLL 167 (1630)
T ss_pred ---Hhhhhccccc-CCCceEEEecCCCe-eEEEc--CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEE
Confidence 3344444432 34566667766655 23333 47899999976445555554442212346777788888888775
Q ss_pred ee-------cCCeEEEEEcccCCcCceeecce---eEEEEc--CCCCCcEEEEecC---CCeEEEEecccC--Ccc-e--
Q 018697 186 AT-------CESSVQFWDLRSMGKTNSIEHAH---VRNVDY--DTKKKHLLVTAAD---ESGIHLWDLRML--KAP-I-- 245 (351)
Q Consensus 186 ~~-------~d~~i~iwd~~~~~~~~~~~~~~---v~~~~~--~~~~~~~l~~~~~---dg~i~i~d~~~~--~~~-~-- 245 (351)
.+ -.|.+.+|..+.+. ...+. +| ...+.. ++....+++.+.. .+.++|.++... +.+ .
T Consensus 168 ~gi~~~~~~v~G~mQLyS~er~~-sQ~ie-gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~k 245 (1630)
T 1xi4_A 168 TGISAQQNRVVGAMQLYSVDRKV-SQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK 245 (1630)
T ss_pred EeeccCCCcccceeeeeeccccc-chhhh-HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcc
Confidence 54 24788899887543 22232 44 212222 1222224433322 368999998653 111 1
Q ss_pred ---eEeeC---CCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEE
Q 018697 246 ---QELPG---HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG 319 (351)
Q Consensus 246 ---~~~~~---~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 319 (351)
..+-. -......+..++.. .++..-+.-|.|.++|+.+ +.++..-+-...+|.-
T Consensus 246 k~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t-------------------~~~i~~~ris~~~iF~ 305 (1630)
T 1xi4_A 246 KAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLET-------------------GTCIYMNRISGETIFV 305 (1630)
T ss_pred ccccccCCcccccCcceEEEecccc-CEEEEEecCceEEEEeccc-------------------chhhhhccccCCceEE
Confidence 11111 12233456677776 7888889999999999999 6666555544445544
Q ss_pred EEeCCCCCceEEEeeeCCeEEEee
Q 018697 320 LAWSSREPWIFASLSYDGRVVVES 343 (351)
Q Consensus 320 ~~~~~~~~~~l~s~~~dg~v~vw~ 343 (351)
.+-+..... ++.....|.|.--.
T Consensus 306 ~~~~~~~~g-~~~vnr~G~vl~v~ 328 (1630)
T 1xi4_A 306 TAPHEATAG-IIGVNRKGQVLSVC 328 (1630)
T ss_pred eccCCCCCc-eEEEcCCceEEEEE
Confidence 443333222 33333455444333
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.61 E-value=0.02 Score=46.97 Aligned_cols=234 Identities=12% Similarity=0.144 Sum_probs=133.7
Q ss_pred ceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcc
Q 018697 79 RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQ 158 (351)
Q Consensus 79 ~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~ 158 (351)
..++.....+++..|.|-|+.. +. ...+.--..+ +.-.+|..+ ++|--...++.++|+++..+...
T Consensus 37 kyicVrE~~~~~~~VvIiDl~n-------~~-~~~Rrpi~Ad----sAIMnP~~~--ViALrag~~LQiFnletK~klks 102 (365)
T 2xzh_A 37 KFICIREKVGEQAQVVIIDMND-------PS-NPIRRPISAD----SAIMNPASK--VIALKAGKTLQIFNIEMKSKMKA 102 (365)
T ss_dssp TEEEEEEEETTEEEEEEEETTS-------TT-SCEEEECCCS----EEEECSSSS--EEEEEETTEEEEEETTTTEEEEE
T ss_pred ceEEEEecCCCCCEEEEEECCC-------CC-Cccccccccc----eeeeCCCcc--EEEEecCCeEEEechHHhhhhcc
Confidence 4445544445556788889872 11 2222211222 233578877 55553468999999997544433
Q ss_pred cccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccC-CcCceeecce------eEEEEcCCCCCcEEEEec---
Q 018697 159 VQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM-GKTNSIEHAH------VRNVDYDTKKKHLLVTAA--- 228 (351)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~------v~~~~~~~~~~~~l~~~~--- 228 (351)
.... +.|.--.|-.+ +.|+..+ +..|+-|++... .+...+.... |..-..+++.+.++++|-
T Consensus 103 ~~~~------e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 174 (365)
T 2xzh_A 103 HTMT------DDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 174 (365)
T ss_dssp EECS------SCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEE
T ss_pred eecC------CccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEecc
Confidence 3322 26766677643 3444444 568999999753 3434443211 778888999996666654
Q ss_pred ---CCCeEEEEecccCCcceeEeeCCCCceeEEEecCC--CCCeEEEeeC---CCeEEEEEcCCCCCCCCCCcccccCCc
Q 018697 229 ---DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPE--YDGFILSAGT---DSTVNLWLVSTSNHDELPSESLVESPN 300 (351)
Q Consensus 229 ---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (351)
-.|.+.+|..+. +.-+.+++|...-..+.+... ...+++-+.. .+.++|-++........ +.
T Consensus 175 ~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~--------~f 244 (365)
T 2xzh_A 175 QNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ--------PF 244 (365)
T ss_dssp TTEEEEEEEEEETTT--TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCC--------CC
T ss_pred CCccceeEEEEeecc--cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCC--------Cc
Confidence 237899999874 456778888765544443221 1123443333 25888888855210000 00
Q ss_pred ccccccceeecc---ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 301 QRANSLLNSYSD---YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 301 ~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
..+.+..+-. ..+-..++..++... ++..-+.-|.|.+||+++-
T Consensus 245 --~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTg 291 (365)
T 2xzh_A 245 --PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG 291 (365)
T ss_dssp --CCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTC
T ss_pred --ccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccC
Confidence 0111111111 123345677787766 7778888899999998763
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.57 E-value=0.014 Score=49.24 Aligned_cols=144 Identities=15% Similarity=0.044 Sum_probs=80.3
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccc-cccCcccceeeeEECCC---CCcEEEeec-C-----C
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGGAWDPH---DVNAVAATC-E-----S 190 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~---~~~l~~~~~-d-----~ 190 (351)
.....++|.|+|+ ++++..++.|.+++ . +. ...+... ....-......++++|+ +..|+++.. . +
T Consensus 31 ~~P~~ia~~pdG~--l~V~e~~g~I~~i~-~-g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGG--MLIAERPGRIRLFR-E-GR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSC--EEEEETTTEEEEEE-T-TE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCe--EEEEeCCCeEEEEE-C-CC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 3467899999998 56665569999998 3 22 1111100 00111236789999998 556665543 2 6
Q ss_pred eEEEEEcccCC-----cCc-eee----cce-eEEEEcCCCCCcEEEEecC-------------CCeEEEEecccC---C-
Q 018697 191 SVQFWDLRSMG-----KTN-SIE----HAH-VRNVDYDTKKKHLLVTAAD-------------ESGIHLWDLRML---K- 242 (351)
Q Consensus 191 ~i~iwd~~~~~-----~~~-~~~----~~~-v~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~---~- 242 (351)
.|..++...+. .+. .+. ..| ...++|.|+|. ++++.+. .|.|.-++.... .
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 78788876431 111 122 123 67899999996 6665432 246666665420 0
Q ss_pred -------cceeEe-eCCCCceeEEEecC-CCCCeEEEee
Q 018697 243 -------APIQEL-PGHTHWTWAVCCNP-EYDGFILSAG 272 (351)
Q Consensus 243 -------~~~~~~-~~~~~~v~~~~~~~-~~~~~l~s~~ 272 (351)
.....+ .++ .....++|+| ++ .++++-.
T Consensus 185 pf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g-~l~v~d~ 221 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGH-RNPQGLAWHPKTG-ELFSSEH 221 (352)
T ss_dssp TTTTCTTSCTTEEEECC-SEECCCEECTTTC-CEEEEEE
T ss_pred cccCCCCCCccEEEEcC-CCcccEEEECCCC-CEEEEEc
Confidence 001111 233 3357899999 55 5555443
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.55 E-value=0.018 Score=48.61 Aligned_cols=143 Identities=16% Similarity=0.032 Sum_probs=80.1
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccc-cccCcccceeeeEECCC---CCcEEEeec----C--
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGGAWDPH---DVNAVAATC----E-- 189 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~---~~~l~~~~~----d-- 189 (351)
-.....++|.|+++ ++++..++.|++++.. +. ..+... ....-......++++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~pdG~--l~V~e~~g~I~~~d~~-G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR--YLVTERPGRLVLISPS-GK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETTE--EEEEETTTEEEEECSS-CE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCCe--EEEEeCCCEEEEEeCC-Cc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 34567899999998 6666556999988733 22 111110 00111235789999997 556665543 2
Q ss_pred --CeEEEEEcccCC-------cC-ceee--cce-eEEEEcCCCCCcEEEEecC-------------CCeEEEEecccCC-
Q 018697 190 --SSVQFWDLRSMG-------KT-NSIE--HAH-VRNVDYDTKKKHLLVTAAD-------------ESGIHLWDLRMLK- 242 (351)
Q Consensus 190 --~~i~iwd~~~~~-------~~-~~~~--~~~-v~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~- 242 (351)
..|..|+..... .+ ..+. ..| ...++|.|+|. ++++.+. .|.|.-++... .
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~ 180 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEG-RP 180 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCC-CC
Confidence 567777766431 11 1122 123 67899999997 6665332 24566666542 1
Q ss_pred -------cceeEeeCCCCceeEEEecC-CCCCeEEEe
Q 018697 243 -------APIQELPGHTHWTWAVCCNP-EYDGFILSA 271 (351)
Q Consensus 243 -------~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~ 271 (351)
....-..++. ....++|+| ++ .++++-
T Consensus 181 p~~npf~~~~i~a~G~r-np~Gla~d~~~g-~l~v~d 215 (354)
T 3a9g_A 181 PADNPFPNSPIWSYGHR-NPQGIDWHRASG-VMVATE 215 (354)
T ss_dssp CTTSSSTTCCEEEECCS-CCCEEEECTTTC-CEEEEE
T ss_pred CCCCCCCCCcEEEEccC-CcceEEEeCCCC-CEEEEe
Confidence 0111112343 346899999 56 555543
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.49 E-value=0.019 Score=48.96 Aligned_cols=151 Identities=9% Similarity=0.097 Sum_probs=92.5
Q ss_pred CCCCEEEEEEeCCCCCeEEEEeeec--CCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCC-C--cceee
Q 018697 39 KEENEVHLLRLSSGGTELICEGLFS--HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNS-P--QLERI 113 (351)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~--h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~-~--~~~~~ 113 (351)
..++.|++..+.+... ........ --..|..+..+|+|.+|+.. .+..|.|-.++........ . ..-..
T Consensus 38 a~~n~iR~~~i~~~~~-Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-----g~~~V~Vv~LP~~~~~~~~~~~~~~~q~ 111 (452)
T 3pbp_A 38 IQDNIIRWYNVLTDSL-YHSLNFSRHLVLDDTFHVISSTSGDLLCLF-----NDNEIFVMEVPWGYSNVEDVSIQDAFQI 111 (452)
T ss_dssp EETTEEEEEETTTCSS-CEEEECTTTCCCCTTCEEEECTTSSEEEEE-----CSSEEEEEECCTTCSCCCCHHHHHTTEE
T ss_pred EECCEEEEEECCCCCc-ceEEecCcccccCceeEEEECCCCCEEEEe-----cCCeEEEEEecCccccCcccccccccce
Confidence 3578899888887543 32222222 12368889999999988886 5668999988832211111 0 00112
Q ss_pred eeeec------cccceeEEEecCCCCC--cEEEEecCCcEEEEEcCCCCCCccccccc-----ccCcccceeeeEECCCC
Q 018697 114 AALDA------HVGKINCVLWWSSGRH--DKLVSIDEENIFLWSLDCSNKNAQVQSKQ-----SSGMLHYLSGGAWDPHD 180 (351)
Q Consensus 114 ~~~~~------h~~~v~~~~~~~~~~~--~~~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~ 180 (351)
+.+.. ...+|..+.|+|-+.. .+++-..|+.|++||+.........+... .......+.+++|.+++
T Consensus 112 ~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~ 191 (452)
T 3pbp_A 112 FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDG 191 (452)
T ss_dssp EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTS
T ss_pred eEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCC
Confidence 23322 2567999999996532 35555779999999998633211111111 11223578899999987
Q ss_pred CcEEEee--cCCeEEEE
Q 018697 181 VNAVAAT--CESSVQFW 195 (351)
Q Consensus 181 ~~l~~~~--~d~~i~iw 195 (351)
-.|.+.+ .+|.|+-.
T Consensus 192 lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 192 LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCEEEEECTTSCEEEEE
T ss_pred cEEEEEecCCCCCEEEE
Confidence 7777755 77888643
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.47 E-value=0.019 Score=44.25 Aligned_cols=101 Identities=8% Similarity=-0.061 Sum_probs=61.9
Q ss_pred ceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecce---------eEEEEcCCCCCcEEEEecCCCeEEEEeccc
Q 018697 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---------VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (351)
.+..++|+|++. |.+. .+|.++-.+..+.....=+.... ...+.|.|+|. +.++ .||.|+-++-.+
T Consensus 42 ~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCc
Confidence 678999999777 4444 78887777765433221111111 37899999997 5554 669998887543
Q ss_pred CCcc-----eeEe-eCCCCceeEEEecCCCCCeEEEeeCCCeEE
Q 018697 241 LKAP-----IQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278 (351)
Q Consensus 241 ~~~~-----~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 278 (351)
.... -..+ ..--..+..|.|.|+| .+.+.. |+.+.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CCcEE
Confidence 2210 0111 1111467899999999 555555 77743
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.30 E-value=0.067 Score=45.84 Aligned_cols=234 Identities=12% Similarity=0.149 Sum_probs=134.0
Q ss_pred ceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcc
Q 018697 79 RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQ 158 (351)
Q Consensus 79 ~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~ 158 (351)
..+++....+.+..|.|-|+.. +. ...+.--..+ +.-.+|..+ +++--...++.|+|+++..+...
T Consensus 36 kyicVrE~~~~~~~vvIiDl~~-------~~-~~~rrpi~Ad----sAIMnP~~~--iiALrag~~lQiFnle~K~klks 101 (494)
T 1bpo_A 36 KFICIREKVGEQAQVVIIDMND-------PS-NPIRRPISAD----SAIMNPASK--VIALKAGKTLQIFNIEMKSKMKA 101 (494)
T ss_dssp TEEEEEECCTTCCEEEEEETTS-------TT-SCEEEECCCS----EEEECSSSS--CEEEEETTEEEEEETTTTEEEEE
T ss_pred ceEEEEecCCCCCeEEEEECCC-------CC-cceecccccc----eeeeCCCCc--EEEEecCCeEEEEchHHhhhhcc
Confidence 4445544445555788888872 11 1211111222 344678777 44443468999999997544433
Q ss_pred cccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccC-CcCceeecce------eEEEEcCCCCCcEEEEec---
Q 018697 159 VQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM-GKTNSIEHAH------VRNVDYDTKKKHLLVTAA--- 228 (351)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~------v~~~~~~~~~~~~l~~~~--- 228 (351)
..... .|.--.|-.+ +.|+..+ +..|+-|++... .+...+.... |..-..+++.+.++++|-
T Consensus 102 ~~~~e------~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 173 (494)
T 1bpo_A 102 HTMTD------DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (494)
T ss_dssp EECSS------CCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEE
T ss_pred eecCC------CceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeeccc
Confidence 33222 5665667543 3344443 568999999753 3434444211 788888999996666554
Q ss_pred ---CCCeEEEEecccCCcceeEeeCCCCceeEEEecCCC--CCeEEEeeC---CCeEEEEEcCCCCCCCCCCcccccCCc
Q 018697 229 ---DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY--DGFILSAGT---DSTVNLWLVSTSNHDELPSESLVESPN 300 (351)
Q Consensus 229 ---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (351)
-.|.+.+|..+. +.-+.+++|...-..+...... ..+++-+.. .+.++|-++....... .+.
T Consensus 174 ~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~--------~~f 243 (494)
T 1bpo_A 174 QNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN--------QPF 243 (494)
T ss_dssp TTEEEEEEEEEESTT--CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC--------CCC
T ss_pred CCcccceEEEeeccc--cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC--------CCc
Confidence 247899999874 4567788887666555443211 134444443 2689998886521000 000
Q ss_pred ccccccceeec---cccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 301 QRANSLLNSYS---DYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 301 ~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
..+.+..+- ...+-..++..++... ++..-+.-|.|.+||+++-
T Consensus 244 --~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 244 --PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp --CCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTC
T ss_pred --cceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccc
Confidence 011111111 1123345677888776 7888888899999998763
No 314
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.25 E-value=0.068 Score=44.79 Aligned_cols=240 Identities=9% Similarity=0.048 Sum_probs=122.9
Q ss_pred CCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee----eccccceeEEEecCC---CCCcE
Q 018697 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL----DAHVGKINCVLWWSS---GRHDK 136 (351)
Q Consensus 64 h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~---~~~~~ 136 (351)
.-...+.|+|.|++..+++- -..+.|++++... .....+..+ .........|+++|+ +..++
T Consensus 30 gL~~P~~ia~~pdG~llVte----r~~G~I~~v~~~~-------g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lY 98 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSS----RDEATITRVDAKT-------GRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVY 98 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEE----TTTCEEEEECTTT-------CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEE
T ss_pred CCCCceEEEEcCCCcEEEEE----ecCCEEEEEECCC-------CcEeeecccCceeecCCCCceeeEeccccccCCEEE
Confidence 34567899999999766653 2378888886431 111222222 223556789999996 34333
Q ss_pred EEE--ecCCcEEEEEcCCCC----C---CcccccccccCcccceeeeEECCCCCcEEEeec-------------CCeEEE
Q 018697 137 LVS--IDEENIFLWSLDCSN----K---NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-------------ESSVQF 194 (351)
Q Consensus 137 ~~~--~~d~~v~iwd~~~~~----~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~i 194 (351)
++- ..++.|.-|.+.... . ...++........+....+.|.|++...++.+. .|.|.-
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlR 178 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILR 178 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEE
Confidence 321 234566666665421 1 111111111112225667999999976666442 245555
Q ss_pred EEcccCC-------cCceeecce--eEEEEcCCCCCcEEEEec-CCCeEEEEecccC-----------------CcceeE
Q 018697 195 WDLRSMG-------KTNSIEHAH--VRNVDYDTKKKHLLVTAA-DESGIHLWDLRML-----------------KAPIQE 247 (351)
Q Consensus 195 wd~~~~~-------~~~~~~~~~--v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~-----------------~~~~~~ 247 (351)
.+....- ....+..++ ...++|+|++. ++++-. .++.=.|--++.. ..++..
T Consensus 179 i~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~ 257 (347)
T 3das_A 179 MTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQ 257 (347)
T ss_dssp ECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEE
T ss_pred EeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEe
Confidence 5544220 112233344 78999999887 554332 2322222222211 113333
Q ss_pred eeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCC
Q 018697 248 LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREP 327 (351)
Q Consensus 248 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 327 (351)
+..+......++|.. + .++...-..+.|....+..... ..+....+.+....+.+|+..|||.
T Consensus 258 ~~~~~~ap~G~~~~~-g-~~~~~~l~~~~l~~v~~~~~~~---------------~~~~e~~l~~~~gR~~dv~~~pDG~ 320 (347)
T 3das_A 258 WSTDEASPSGIAYAE-G-SVWMAGLRGERLWRIPLKGTAA---------------AADPQAFLEGEYGRLRTVAPAGGDK 320 (347)
T ss_dssp ECTTTCCEEEEEEET-T-EEEEEESTTCSEEEEEEETTEE---------------SSCCEEESTTTSSCEEEEEEEETTE
T ss_pred cCCCCCCCcceEEEc-C-ceeeccccCCEEEEEEecCCce---------------ecceEEeecCCCCCccEEEECCCCc
Confidence 433323456777763 4 4555554455555555543100 0111122333345789999999998
Q ss_pred ceEEEe
Q 018697 328 WIFASL 333 (351)
Q Consensus 328 ~~l~s~ 333 (351)
++++.
T Consensus 321 -lyv~t 325 (347)
T 3das_A 321 -LWLVT 325 (347)
T ss_dssp -EEEEE
T ss_pred -EEEEE
Confidence 44443
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.08 E-value=0.12 Score=44.28 Aligned_cols=146 Identities=8% Similarity=0.010 Sum_probs=91.8
Q ss_pred cCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcC-----
Q 018697 129 WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT----- 203 (351)
Q Consensus 129 ~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~----- 203 (351)
+.++..+++ ..++.||.-++.... ..+.+.....-.-..+..+..+|+|++|+..+ +..|.|..+..+...
T Consensus 29 ~~n~t~i~~--a~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 29 SQNGTRIVF--IQDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp ETTTTEEEE--EETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EcCCCEEEE--EECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence 445553222 345788888887533 23333222100111577899999999887765 568888888733211
Q ss_pred -------ceeecc------e--eEEEEcCCCCCc--EEEEecCCCeEEEEeccc-CCcceeEee---------CCCCcee
Q 018697 204 -------NSIEHA------H--VRNVDYDTKKKH--LLVTAADESGIHLWDLRM-LKAPIQELP---------GHTHWTW 256 (351)
Q Consensus 204 -------~~~~~~------~--v~~~~~~~~~~~--~l~~~~~dg~i~i~d~~~-~~~~~~~~~---------~~~~~v~ 256 (351)
..+..+ . |..+.|+|-+.. .|++-..|+.|++||+.. ...|. .+. .....|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 112211 2 899999997653 788899999999999985 22233 332 2235688
Q ss_pred EEEecCCCCCeEEEee--CCCeEEEE
Q 018697 257 AVCCNPEYDGFILSAG--TDSTVNLW 280 (351)
Q Consensus 257 ~~~~~~~~~~~l~s~~--~dg~i~iw 280 (351)
+++|.+++ ..|...+ ..|-|+-.
T Consensus 184 S~~Fg~~~-lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 184 DLEFSKDG-LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTS-SCEEEEECTTSCEEEEE
T ss_pred EEEEcCCC-cEEEEEecCCCCCEEEE
Confidence 99999977 7777755 77877654
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.98 E-value=0.16 Score=44.40 Aligned_cols=112 Identities=8% Similarity=-0.072 Sum_probs=59.8
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec------cccceeEEEecCC---CCCc
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA------HVGKINCVLWWSS---GRHD 135 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~---~~~~ 135 (351)
-...+.|+|.|+++.+++- ...+.|.+++... .....+..+.. .......|+|+|+ +..+
T Consensus 26 l~~P~~~a~~pdG~l~V~e----~~gg~I~~~~~~~-------g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~l 94 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTE----RATGKILRVNPES-------GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYI 94 (454)
T ss_dssp CSSEEEEEECTTSCEEEEE----TTTCEEEEECTTT-------CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEE
T ss_pred CCCceEEEEcCCCcEEEEE----cCCCEEEEEECCC-------CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEE
Confidence 3466799999999866663 2223577666431 11222222221 2456789999996 5544
Q ss_pred EEEEec------------CCcEEEEEcCCCCC----CcccccccccCcccceeeeEECCCCCcEEEee
Q 018697 136 KLVSID------------EENIFLWSLDCSNK----NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187 (351)
Q Consensus 136 ~~~~~~------------d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (351)
+++.+. ...|.-+++..... ...++........+....++|.|++.+.++.+
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 444442 23566666543211 11111111111123578899999998666544
No 317
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.97 E-value=0.13 Score=42.88 Aligned_cols=188 Identities=6% Similarity=-0.012 Sum_probs=98.4
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEccc
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS 199 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 199 (351)
...+.+|.|.+.+. .++.+..+.| |....+.+...............+.++.+.+ + .+++++..+.|.. ....
T Consensus 35 ~~~~~~v~~~~~~~--~~~~G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRHH--GWLVGVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSSC--EEEEETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEE-ESST
T ss_pred CCcEEEEEECCCCc--EEEEcCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEE-ECCC
Confidence 34688998887666 4445566755 3333333332222211111123688888876 3 4555566665543 2233
Q ss_pred CCcCceeec-----ceeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEe-eCCCCceeEEEecCCCCCeEEEeeC
Q 018697 200 MGKTNSIEH-----AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGT 273 (351)
Q Consensus 200 ~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~ 273 (351)
++.-..... ..+..+.+.+++. +++.+ .++.|. -....++.-... ..+...+..+.+.|++ .+++.+..
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~~-~~g~v~--~S~DgG~tW~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 182 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGS-AEMIT-NVGAIY--RTKDSGKNWQALVQEAIGVMRNLNRSPSG-EYVAVSSR 182 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTE-EEEEE-TTCCEE--EESSTTSSEEEEECSCCCCEEEEEECTTS-CEEEEETT
T ss_pred CCCceECccccCCCCCeEEEEEECCCC-EEEEe-CCccEE--EEcCCCCCCEEeecCCCcceEEEEEcCCC-cEEEEECC
Confidence 332222111 1266677766665 55555 455442 222223222222 2445678899999988 77776654
Q ss_pred CCeEEEEEc--CCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEe
Q 018697 274 DSTVNLWLV--STSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVE 342 (351)
Q Consensus 274 dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw 342 (351)
.+..+-+|- .+ .+.+. ......+..+.+.+++. ++ .++.+|.+++.
T Consensus 183 G~~~~S~d~gG~t-------------------W~~~~--~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s 230 (327)
T 2xbg_A 183 GSFYSTWEPGQTA-------------------WEPHN--RTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFS 230 (327)
T ss_dssp SSEEEEECTTCSS-------------------CEEEE--CCSSSCEEEEEECTTSC-EE-EEETTTEEEEE
T ss_pred CcEEEEeCCCCCc-------------------eeECC--CCCCCccceeEECCCCC-EE-EEeCCceEEEe
Confidence 444444443 22 33332 12344678888988886 44 44456777665
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.90 E-value=0.097 Score=40.43 Aligned_cols=149 Identities=5% Similarity=-0.049 Sum_probs=79.8
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccc---ccCcccceeeeEECCCCCcEEEeecCCeEEEEEc
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ---SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDL 197 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 197 (351)
..+..++|+|++. +.+. .+|.++-.+..+.....-.-... ..+.. ...++.|.|++.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P~G~--LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGE--LYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSC--EEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCcc--EEEE-eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 3677999999888 4444 67776665554322111111111 00111 2478899998876666 6699988876
Q ss_pred ccCCcC------ceeec---ceeEEEEcCCCCCcEEEEecCCCeEEEEecccCCc-----ceeEee-CCCCceeEEEecC
Q 018697 198 RSMGKT------NSIEH---AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA-----PIQELP-GHTHWTWAVCCNP 262 (351)
Q Consensus 198 ~~~~~~------~~~~~---~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~-~~~~~v~~~~~~~ 262 (351)
.+.... ..+.. ..+..|.+.|+|. +.++. |+.++-........ ....+- ..-..-.-+.|.|
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 432211 11111 1189999999997 55544 77754322221010 011111 2222344567899
Q ss_pred CCCCeEEEeeCCCeEEEEEcC
Q 018697 263 EYDGFILSAGTDSTVNLWLVS 283 (351)
Q Consensus 263 ~~~~~l~s~~~dg~i~iwd~~ 283 (351)
++ .+.+.. ++ ++|...
T Consensus 192 ~G-~l~~v~--~g--~~Y~~~ 207 (236)
T 1tl2_A 192 VG-TLFGVQ--GG--KFYEDY 207 (236)
T ss_dssp TS-CEEEEE--TT--EEEEES
T ss_pred CC-cEEEEe--CC--eEEecC
Confidence 88 665555 66 455444
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.86 E-value=0.14 Score=41.80 Aligned_cols=139 Identities=9% Similarity=0.009 Sum_probs=68.1
Q ss_pred cEEEEecC-----CcEEEEEcCCCCCC-cccccccccCcccceeeeEECCCCCcEEEeecC-----CeEEEEEcccCCcC
Q 018697 135 DKLVSIDE-----ENIFLWSLDCSNKN-AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSMGKT 203 (351)
Q Consensus 135 ~~~~~~~d-----~~v~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~ 203 (351)
+++.++.+ ..+.+||+.+.... ..... ...........+.+ ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 65 l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~-~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 65 IYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA-PMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC-CCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred EEEEcCCCCCccCceEEEEECCCCCCCeeEECC-CCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 56666543 46889998865410 11111 11111111222222 45666666533 46888998765422
Q ss_pred c--eeecce--eEEEEcCCCCCcEEEEecCC-----CeEEEEecccCCcceeEeeCCC---CceeEEEecCCCCCeEEEe
Q 018697 204 N--SIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAPIQELPGHT---HWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 204 ~--~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~s~ 271 (351)
. .+.... ...+.+ ++. +++.|+.+ ..+.+||+.+ . .-..+.... .....+.+ ++ .+++.|
T Consensus 142 ~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~-~-~W~~~~~~p~~r~~~~~~~~--~~-~i~v~G 213 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHT-G-HWTNVTPMATKRSGAGVALL--ND-HIYVVG 213 (301)
T ss_dssp EEEECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTT-T-EEEEECCCSSCCBSCEEEEE--TT-EEEEEC
T ss_pred ECCCCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCC-C-cEEeCCCCCcccccceEEEE--CC-EEEEEe
Confidence 1 111111 222222 454 77777654 4688999875 2 222222111 11122222 44 677777
Q ss_pred eCC-----CeEEEEEcCC
Q 018697 272 GTD-----STVNLWLVST 284 (351)
Q Consensus 272 ~~d-----g~i~iwd~~~ 284 (351)
+.+ ..+.+||+.+
T Consensus 214 G~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp CBCSSSBCCCEEEEETTT
T ss_pred CCCCCcccceEEEEeCCC
Confidence 764 4688899876
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.78 E-value=0.079 Score=44.69 Aligned_cols=102 Identities=8% Similarity=0.104 Sum_probs=58.1
Q ss_pred ceeeeEECCCCCcEEEeecCCeEEEEEcccCC--cCcee----ecc-e-eEEEEcCCC---CCcEEEEecC-------CC
Q 018697 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMG--KTNSI----EHA-H-VRNVDYDTK---KKHLLVTAAD-------ES 231 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~----~~~-~-v~~~~~~~~---~~~~l~~~~~-------dg 231 (351)
....++|.|+++.|+++...|.|++++..... .+..+ ... . ...++++|+ +..++++-.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 56789999999856666778999999854221 11111 111 1 789999996 4435554332 23
Q ss_pred eEEEEecccCCc---ceeE-eeC------CCCceeEEEecCCCCCeEEEee
Q 018697 232 GIHLWDLRMLKA---PIQE-LPG------HTHWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 232 ~i~i~d~~~~~~---~~~~-~~~------~~~~v~~~~~~~~~~~~l~s~~ 272 (351)
.|..|++..... .... +.. .......++|.|+| .++++.+
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G 148 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALG 148 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEEC
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEEC
Confidence 566666643111 1111 111 11224679999999 6655543
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.61 E-value=0.27 Score=43.00 Aligned_cols=102 Identities=9% Similarity=0.156 Sum_probs=57.0
Q ss_pred ceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCc--eeec-------ce-eEEEEcCCC---CCcEEEEecC-------
Q 018697 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN--SIEH-------AH-VRNVDYDTK---KKHLLVTAAD------- 229 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~-------~~-v~~~~~~~~---~~~~l~~~~~------- 229 (351)
...+++|.|+++.+++-...+.|++++..+++... .+.. .. +..|+|+|+ +..++++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 56799999999855543333478888765443211 1110 12 779999995 4434444332
Q ss_pred -----CCeEEEEecccCC------ccee-Eee-CCCCceeEEEecCCCCCeEEEee
Q 018697 230 -----ESGIHLWDLRMLK------APIQ-ELP-GHTHWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 230 -----dg~i~i~d~~~~~------~~~~-~~~-~~~~~v~~~~~~~~~~~~l~s~~ 272 (351)
...|.-|+..... +.+. .+. ........|+|.|+| .++++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEEC
Confidence 2356666654211 1111 122 112357899999999 6655544
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.56 E-value=0.24 Score=40.52 Aligned_cols=138 Identities=9% Similarity=0.024 Sum_probs=67.0
Q ss_pred cEEEEecC----CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC------CeEEEEEcccCCc--
Q 018697 135 DKLVSIDE----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE------SSVQFWDLRSMGK-- 202 (351)
Q Consensus 135 ~~~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~-- 202 (351)
+++.++.+ ..+.+||+.+..- ...... .........+.+ ++..++.|+.+ ..+.+||+.+.+-
T Consensus 58 lyv~GG~~~~~~~~~~~~d~~~~~W--~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 58 VYILGGSQLFPIKRMDCYNVVKDSW--YSKLGP-PTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp EEEECCBSSSBCCEEEEEETTTTEE--EEEECC-SSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred EEEEeCCCCCCcceEEEEeCCCCeE--EECCCC-CccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56666543 6788888875421 111111 111111222222 45666666644 4688899876532
Q ss_pred Cceeecce--eEEEEcCCCCCcEEEEecC---------CCeEEEEecccCCcceeEeeCCCCc--eeEEEecCCCCCeEE
Q 018697 203 TNSIEHAH--VRNVDYDTKKKHLLVTAAD---------ESGIHLWDLRMLKAPIQELPGHTHW--TWAVCCNPEYDGFIL 269 (351)
Q Consensus 203 ~~~~~~~~--v~~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~ 269 (351)
+..+.... ...+.+ ++. +++.|+. -..+.+||+.+ . .-..+.....+ -.++... ++ .+++
T Consensus 133 ~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~-~-~W~~~~~~p~~r~~~~~~~~-~~-~i~v 205 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA--NGL-IYVCGGSLGNNVSGRVLNSCEVYDPAT-E-TWTELCPMIEARKNHGLVFV-KD-KIFA 205 (306)
T ss_dssp ECCCSSCCBSCEEEEE--TTE-EEEECCEESCTTTCEECCCEEEEETTT-T-EEEEECCCSSCCBSCEEEEE-TT-EEEE
T ss_pred CCCCcCCcceeEEEEE--CCE-EEEECCCCCCCCcccccceEEEeCCCC-C-eEEECCCccchhhcceEEEE-CC-EEEE
Confidence 11111111 222222 454 6776763 34588999875 3 22223211111 1112222 44 6777
Q ss_pred EeeCC-----CeEEEEEcCC
Q 018697 270 SAGTD-----STVNLWLVST 284 (351)
Q Consensus 270 s~~~d-----g~i~iwd~~~ 284 (351)
.|+.+ ..+.+||+.+
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp ECCEETTEEBCCEEEEETTT
T ss_pred EeCCCCCCCCceEEEeeCCC
Confidence 77653 3578888876
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.51 E-value=0.058 Score=44.36 Aligned_cols=137 Identities=8% Similarity=0.049 Sum_probs=73.1
Q ss_pred cCCCCCcEEEE-ecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC--------------CeEE
Q 018697 129 WSSGRHDKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE--------------SSVQ 193 (351)
Q Consensus 129 ~~~~~~~~~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------~~i~ 193 (351)
++++..+.++. ..++.|+..+.+. .....+... . +--+++++.+|+..... ..|+
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg--~~~~~l~~~------~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy 91 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDG--SNIHKLSND------T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLC 91 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTS--CSCEEEEEE------E--EEEEEECSSEEEEEEECC------CCSSCCSEEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCC--CCCEEccCC------c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEE
Confidence 45666655554 3356666555542 222222211 2 23457788888877542 4677
Q ss_pred EEEcccCCcCceeecceeEEEEcCCCCCcEEEEe---cCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEE
Q 018697 194 FWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTA---ADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILS 270 (351)
Q Consensus 194 iwd~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 270 (351)
..++..++. ..+... ....|++++..++.+- ..+..|+..++. +.....+..+.. .+++|+++.+..+
T Consensus 92 ~i~~dg~~~-~~l~~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d--Gs~~~~lt~~~~----~~~~~~g~~iy~t 162 (302)
T 3s25_A 92 RIKRNGHGS-TVLDPD--PCIYASLIGNYIYYLHYDTQTATSLYRIRID--GEEKKKIKNHYL----FTCNTSDRYFYYN 162 (302)
T ss_dssp EEETTSCCC-EEEECS--CEEEEEEETTEEEEEEESSSSCEEEEEEETT--SCCCEEEESSCC----CCSEEETTEEEEE
T ss_pred EEeCCCCcc-eEeecC--CccEEEEeCCEEEEEeecCCCCceEEEEECC--CCCeEEEeCCCc----eEeeEECCEEEEE
Confidence 777776542 222212 2235677888555444 234455555555 334555554433 4578888444445
Q ss_pred eeCCCeEEEEEcCC
Q 018697 271 AGTDSTVNLWLVST 284 (351)
Q Consensus 271 ~~~dg~i~iwd~~~ 284 (351)
......|..-++..
T Consensus 163 ~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 163 NPKNGQLYRYDTAS 176 (302)
T ss_dssp CTTTCCEEEEETTT
T ss_pred eCCCceEEEEECCC
Confidence 44456777777654
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.49 E-value=0.22 Score=40.67 Aligned_cols=137 Identities=9% Similarity=-0.008 Sum_probs=65.4
Q ss_pred cEEEEecC-----CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC-----CeEEEEEcccCCcC-
Q 018697 135 DKLVSIDE-----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSMGKT- 203 (351)
Q Consensus 135 ~~~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~- 203 (351)
+++.++.+ ..+.+||+.+.. ....... .........+.+ ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 64 lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 64 VFAVGGFNGSLRVRTVDSYDPVKDQ--WTSVANM-RDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp EEEESCBCSSSBCCCEEEEETTTTE--EEEECCC-SSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEeCcCCCccccceEEECCCCCc--eeeCCCC-CccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56666543 458888887532 1111111 111111222222 45666666644 35778888765321
Q ss_pred -ceeecce--eEEEEcCCCCCcEEEEecCC-------CeEEEEecccCCcceeEeeC---CCCceeEEEecCCCCCeEEE
Q 018697 204 -NSIEHAH--VRNVDYDTKKKHLLVTAADE-------SGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFILS 270 (351)
Q Consensus 204 -~~~~~~~--v~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s 270 (351)
..+.... ...+.+ ++. +++.|+.+ ..+.+||+.+ .+ -..+.. .......+.+ ++ .+++.
T Consensus 139 ~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~-~iyv~ 210 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATT-NE-WTYIAEMSTRRSGAGVGVL--NN-LLYAV 210 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTT-TE-EEEECCCSSCCBSCEEEEE--TT-EEEEE
T ss_pred cCCCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCC-Cc-EEECCCCccccccccEEEE--CC-EEEEE
Confidence 1111111 222222 454 67777642 3588899875 21 222211 1111122222 44 67777
Q ss_pred eeCCC-----eEEEEEcCC
Q 018697 271 AGTDS-----TVNLWLVST 284 (351)
Q Consensus 271 ~~~dg-----~i~iwd~~~ 284 (351)
|+.++ .+.+||..+
T Consensus 211 GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp CCBSSSSBCCCEEEEETTT
T ss_pred CCCCCCcccceEEEEeCCC
Confidence 77643 688888876
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.33 E-value=0.94 Score=44.70 Aligned_cols=132 Identities=13% Similarity=0.140 Sum_probs=79.4
Q ss_pred CCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceeecc---eeEEEEcCC
Q 018697 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA---HVRNVDYDT 218 (351)
Q Consensus 142 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~v~~~~~~~ 218 (351)
.|.|.+|++.. .+...+.... ....+++++-- +| +|+++- ..+|++|++...+.+. .... ++..+....
T Consensus 863 ~Gri~vf~v~~-~kL~lv~~~~---v~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~ 934 (1158)
T 3ei3_A 863 QGRIVVFQYSD-GKLQTVAEKE---VKGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 934 (1158)
T ss_dssp CEEEEEEEEET-TEEEEEEEEE---ESSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEE-EEEEECCCSCEEEEEE
T ss_pred ceEEEEEEEEC-CEEEEEEEEE---cCCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEE-EEeeccccEEEEEEec
Confidence 47899999973 2222222222 23477777643 24 455543 5789999998665333 2211 122222222
Q ss_pred CCCcEEEEecCCCeEEEEecccCCcceeEee--CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 219 KKKHLLVTAADESGIHLWDLRMLKAPIQELP--GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 219 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
.+. +++.|..-..|.++..+.....+..+. .+..+++++.|-.++ .++.+..+|.|.+.....
T Consensus 935 ~~~-~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~--t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 935 KGD-FILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD--NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ETT-EEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT--EEEEEETTSEEEEEEECT
T ss_pred cCC-EEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC--cEEEEcCCCcEEEEecCC
Confidence 454 678888777787776654333344443 355678888887554 677789999999988765
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.30 E-value=0.97 Score=44.58 Aligned_cols=212 Identities=12% Similarity=0.088 Sum_probs=99.5
Q ss_pred CCEEEEEEeCCCCCeEEEEeeecCCcceeeeeeCCCC------CceEEEEeecCCcceEEEEEcccccCCCCCCcceeee
Q 018697 41 ENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFD------QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIA 114 (351)
Q Consensus 41 ~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~------~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~ 114 (351)
.+.+..+.+.+. .+.......-+..|.|+++.|.. +.+++++ -.|++++|++++ ..+.+.
T Consensus 531 g~~l~~fel~~~--~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~---~~d~tv~I~sL~---------~l~~~~ 596 (1158)
T 3ei3_A 531 GRALYYLQIHPQ--ELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGL---WTDISARILKLP---------SFELLH 596 (1158)
T ss_dssp TTEEEEEEEETT--EEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEE---TTTTEEEEEETT---------TCCEEE
T ss_pred CCEEEEEEeeCC--ceeeecccCCCCceEEEEeecCCCCcccccEEEEEE---CCCCEEEEEECC---------CCCeEE
Confidence 356777777652 23322233446789999997642 3555542 348999999997 333333
Q ss_pred eeec-cccceeEEEecC-CCCCcEEEEecCCcEEEEEcCCCC-CCcccccccccCcccceeeeEECCCCCcEEEeecCCe
Q 018697 115 ALDA-HVGKINCVLWWS-SGRHDKLVSIDEENIFLWSLDCSN-KNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS 191 (351)
Q Consensus 115 ~~~~-h~~~v~~~~~~~-~~~~~~~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 191 (351)
...- ......++.+.. .+...++++-.||.+.-+.++... ....... ..-| ..++.-..+...+..-+.+..+..
T Consensus 597 ~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~-~~LG-~~pv~L~~~~~~~~~~V~a~s~rp 674 (1158)
T 3ei3_A 597 KEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKK-VTLG-TQPTVLRTFRSLSTTNVFACSDRP 674 (1158)
T ss_dssp EEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEE-EECC-SSCCEEEEEESSSCEEEEEESSSC
T ss_pred EEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcccccee-EEcC-CCceEEEEEeeCCceeEEEECCCC
Confidence 2211 112233333322 223236667778988777665311 1111100 1111 123433334333333333333443
Q ss_pred EEEEEcccCCcCce-eecce-eEEEEcCCCC-CcEEEEecCCCeEEEEecccCCc-ceeEeeCCCCceeEEEecCCCCCe
Q 018697 192 VQFWDLRSMGKTNS-IEHAH-VRNVDYDTKK-KHLLVTAADESGIHLWDLRMLKA-PIQELPGHTHWTWAVCCNPEYDGF 267 (351)
Q Consensus 192 i~iwd~~~~~~~~~-~~~~~-v~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~ 267 (351)
..++.-+ ++.... +.... -....|+... +.-++..+ ++.++|..+....+ .++++. -...+..++++|.. ..
T Consensus 675 ~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~-~~ 750 (1158)
T 3ei3_A 675 TVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVS-QC 750 (1158)
T ss_dssp EEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGG-TE
T ss_pred EEEEEcC-CceEEeccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCC-CE
Confidence 3344322 221111 11111 2233443221 11233333 45699988865332 233333 34678899999987 55
Q ss_pred EEEee
Q 018697 268 ILSAG 272 (351)
Q Consensus 268 l~s~~ 272 (351)
++.+.
T Consensus 751 ~~v~~ 755 (1158)
T 3ei3_A 751 FGVLS 755 (1158)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 327
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.24 E-value=0.39 Score=39.40 Aligned_cols=139 Identities=4% Similarity=-0.086 Sum_probs=74.8
Q ss_pred EEecCCCCCcEEEEecC-------------CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEee----c
Q 018697 126 VLWWSSGRHDKLVSIDE-------------ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT----C 188 (351)
Q Consensus 126 ~~~~~~~~~~~~~~~~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~ 188 (351)
--+++++.++..+...+ ..|+..+++..+ ...+.. -.+..|+++++.|+... .
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~--~~~l~~--------~~~~~~s~~g~~Iy~~~~~~~~ 127 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG--STVLDP--------DPCIYASLIGNYIYYLHYDTQT 127 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC--CEEEEC--------SCEEEEEEETTEEEEEEESSSS
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc--ceEeec--------CCccEEEEeCCEEEEEeecCCC
Confidence 34578888766555433 356666666432 222221 12236777888888765 3
Q ss_pred CCeEEEEEcccCCcCceeecceeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeE
Q 018697 189 ESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI 268 (351)
Q Consensus 189 d~~i~iwd~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 268 (351)
+..|+..++... ....+....+ .+++|+++.++.+......|.+.++.. .. .+.+.. .... ..+.|++ .+|
T Consensus 128 ~~~Iy~~~~dGs-~~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g-~~-~~~l~~--~~~~-~~~~P~g-~~i 198 (302)
T 3s25_A 128 ATSLYRIRIDGE-EKKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTAS-QS-EALFYD--CNCY-KPVVLDD-TNV 198 (302)
T ss_dssp CEEEEEEETTSC-CCEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTT-TE-EEEEEC--SCEE-EEEEEET-TEE
T ss_pred CceEEEEECCCC-CeEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCC-CC-EEEEeC--CCcc-ceeeecC-CEE
Confidence 445666666533 3333332223 567888886666655567888888764 32 233322 2222 2356888 555
Q ss_pred EEeeC-CC-eEEEEEcC
Q 018697 269 LSAGT-DS-TVNLWLVS 283 (351)
Q Consensus 269 ~s~~~-dg-~i~iwd~~ 283 (351)
+-... ++ .|..-++.
T Consensus 199 y~t~~~~~~~I~~~~ld 215 (302)
T 3s25_A 199 YYMDVNRDNAIVHVNIN 215 (302)
T ss_dssp EEEEGGGTTEEEEECSS
T ss_pred EEEEcCCCcEEEEEECC
Confidence 54433 32 34444443
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.02 E-value=0.88 Score=45.34 Aligned_cols=234 Identities=12% Similarity=0.152 Sum_probs=129.2
Q ss_pred ceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcc
Q 018697 79 RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQ 158 (351)
Q Consensus 79 ~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~ 158 (351)
..+++....+....|.|-|+.. +. .+.+.--... +.-.+|..+ +++--...++.|+|+.+..+...
T Consensus 36 kyicvre~~~~~~~vvIidl~~-------~~-~~~rrpi~Ad----sAIMnP~~~--iiALrag~~lQiFnl~~k~klks 101 (1630)
T 1xi4_A 36 KFICIREKVGEQAQVVIIDMND-------PS-NPIRRPISAD----SAIMNPASK--VIALKAGKTLQIFNIEMKSKMKA 101 (1630)
T ss_pred ceEEEEecCCCCceEEEEECCC-------CC-Ccccccccch----hhccCCCcc--eEEEecCCeEEEeehHHhhhhcc
Confidence 4444443344555788888872 11 1111111112 233577776 55554468999999987555444
Q ss_pred cccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccC-CcCceeecc-----e-eEEEEcCCCCCcEEEEec---
Q 018697 159 VQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM-GKTNSIEHA-----H-VRNVDYDTKKKHLLVTAA--- 228 (351)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~-----~-v~~~~~~~~~~~~l~~~~--- 228 (351)
..... +|.--.|-.. +.|+..+ +..|+-|++... .+...+... . |..-..+++.+.++++|-
T Consensus 102 ~~~~e------~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 102 HTMTD------DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred cccCC------CceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccC
Confidence 33322 5666677643 3344433 568999999743 333333311 1 777788899986666554
Q ss_pred ---CCCeEEEEecccCCcceeEeeCCCCceeEEEec--CCCCCeEEEeeC---CCeEEEEEcCCCCCCCCCCcccccCCc
Q 018697 229 ---DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCN--PEYDGFILSAGT---DSTVNLWLVSTSNHDELPSESLVESPN 300 (351)
Q Consensus 229 ---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (351)
-.|.+.+|..+. +.-+.+++|......+... +....+++-+.. .+.++|-++....... .+.
T Consensus 174 ~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~--------~~f 243 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN--------QPF 243 (1630)
T ss_pred CCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC--------CCC
Confidence 347899999874 3456667776655444432 211133333322 2688888886520000 000
Q ss_pred ccccccceeecc---ccceEEEEEeCCCCCceEEEeeeCCeEEEeecCcc
Q 018697 301 QRANSLLNSYSD---YEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPF 347 (351)
Q Consensus 301 ~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 347 (351)
. .+.+..+.. ..+-..++..++... ++...+.-|.|.+||+.+-
T Consensus 244 ~--kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 244 P--KKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG 290 (1630)
T ss_pred c--cccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccc
Confidence 0 111111111 122234677777766 7778888899999998763
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.84 E-value=0.86 Score=39.90 Aligned_cols=112 Identities=7% Similarity=-0.040 Sum_probs=58.7
Q ss_pred cceeeeeeCCCCC-ceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeee---------ccccceeEEEecCC---C
Q 018697 66 NEIWDLSSCPFDQ-RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD---------AHVGKINCVLWWSS---G 132 (351)
Q Consensus 66 ~~v~~i~~~~~~~-~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~---~ 132 (351)
...+.|+|.|++. +++++ ...|.|++++.... . ....+..+. ........|+|+|+ .
T Consensus 14 ~~P~~~a~~pdG~~rl~V~----er~G~i~~~~~~g~---~---~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL----EKEGYVKILTPEGE---I---FKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE----ETTTEEEEECTTSC---B---CSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred CCceEEEECCCCCeEEEEE----eCCceEEEEeCCCC---e---eeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 4567999999986 45554 36788888864310 0 001111111 12456789999996 3
Q ss_pred CCcEEEEec--C----------CcEEEEEcCCCC--C-----CcccccccccCcccceeeeEECCCCCcEEEee
Q 018697 133 RHDKLVSID--E----------ENIFLWSLDCSN--K-----NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187 (351)
Q Consensus 133 ~~~~~~~~~--d----------~~v~iwd~~~~~--~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (351)
..++++-+. + ..|.-|.+.... . ...++.............|+|.||+.+.++.+
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 333333232 1 144456665321 1 11112111112223567899999997666554
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.83 E-value=0.13 Score=45.54 Aligned_cols=72 Identities=10% Similarity=0.015 Sum_probs=55.5
Q ss_pred eEEEEcCCCCCcEEEEecCCCeEEEEecccCCc-----------c-eeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEE
Q 018697 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA-----------P-IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278 (351)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----------~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 278 (351)
...+.++|||+++++.|-.+.++.++|+++... . +.+.+ -.......+|.++| ....|.--|..|.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G-~aYTtlfidSqvv 402 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRG-NAYTTLFIDSQVV 402 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSS-EEEEEETTTTEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCC-ceEeeeeecceEE
Confidence 778999999998888888899999999984211 1 11222 23456788999999 7777888899999
Q ss_pred EEEcCC
Q 018697 279 LWLVST 284 (351)
Q Consensus 279 iwd~~~ 284 (351)
-|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999975
No 331
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.28 E-value=0.99 Score=36.91 Aligned_cols=98 Identities=9% Similarity=0.011 Sum_probs=50.9
Q ss_pred CCCcEEEeecC-----CeEEEEEcccCCc--Cceeecce--eEEEEcCCCCCcEEEEecCC-----CeEEEEecccCCcc
Q 018697 179 HDVNAVAATCE-----SSVQFWDLRSMGK--TNSIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAP 244 (351)
Q Consensus 179 ~~~~l~~~~~d-----~~i~iwd~~~~~~--~~~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~ 244 (351)
++..++.|+.+ ..+.+||+.+.+- +..+.... ...+.+ ++. +++.|+.+ ..+.+||+.+ . .
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~-~-~ 195 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRL-LYAVGGFDGTNRLNSAECYYPER-N-E 195 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTT-T-E
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCE-EEEEeCCCCCCcCceEEEEeCCC-C-e
Confidence 45666666532 4688899876531 11222122 222333 454 77777654 4688999875 2 1
Q ss_pred eeEeeC---CCCceeEEEecCCCCCeEEEeeCC-----CeEEEEEcCC
Q 018697 245 IQELPG---HTHWTWAVCCNPEYDGFILSAGTD-----STVNLWLVST 284 (351)
Q Consensus 245 ~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~ 284 (351)
-..+.. .......+.+ ++ .+++.|+.+ ..+.+||+.+
T Consensus 196 W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTT
T ss_pred EeeCCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCC
Confidence 222211 1111122222 44 677777664 4588888876
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.22 E-value=1.1 Score=36.87 Aligned_cols=98 Identities=14% Similarity=0.157 Sum_probs=50.1
Q ss_pred CCCcEEEeecC--------CeEEEEEcccCC--cCceeecce--eEEEEcCCCCCcEEEEecC-C-----CeEEEEeccc
Q 018697 179 HDVNAVAATCE--------SSVQFWDLRSMG--KTNSIEHAH--VRNVDYDTKKKHLLVTAAD-E-----SGIHLWDLRM 240 (351)
Q Consensus 179 ~~~~l~~~~~d--------~~i~iwd~~~~~--~~~~~~~~~--v~~~~~~~~~~~~l~~~~~-d-----g~i~i~d~~~ 240 (351)
++..++.|+.+ ..+.+||+.+.+ .+..+..+. ...+. -++. +++.|+. + ..+.+||..+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDL-VYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTE-EEEECCBCTTSCBCCCEEEEETTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCE-EEEEeCCCCCCcccceEEEEeCCC
Confidence 45555666532 468889987653 122222122 22222 2444 7777765 2 4688999875
Q ss_pred CCcceeEeeCC---CCceeEEEecCCCCCeEEEeeCCC-----eEEEEEcCC
Q 018697 241 LKAPIQELPGH---THWTWAVCCNPEYDGFILSAGTDS-----TVNLWLVST 284 (351)
Q Consensus 241 ~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~ 284 (351)
. .-..+... ...-..+.+ ++ .+++.|+.++ .+.+||..+
T Consensus 175 -~-~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 175 -F-EWKELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp -T-EEEECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTT
T ss_pred -C-eEEECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCC
Confidence 2 12222211 111122222 44 6777777654 477888876
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.02 E-value=1.3 Score=36.98 Aligned_cols=152 Identities=16% Similarity=0.089 Sum_probs=83.2
Q ss_pred eeeeeccccceeEEEecCCCCCcEEEEec-CCcEEEEEcCCCCCCcccc--cccccCcccceeeeEECCC---CCcEEEe
Q 018697 113 IAALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQ--SKQSSGMLHYLSGGAWDPH---DVNAVAA 186 (351)
Q Consensus 113 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-d~~v~iwd~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~---~~~l~~~ 186 (351)
+..+...-...+.|+|.|+|. ++++.. .|.|++++...+.. ..+. ......-......++++|+ +..|++.
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~--llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGD--LLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSC--EEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred eEEeecCCCCceEEEEcCCCc--EEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 334444445678999999998 566654 89999987654322 1111 0011111336789999995 4445543
Q ss_pred -e--cCCeEEEEEcccCC----c---Cc----eee--cce-eEEEEcCCCCCcEEEEecC-------------CCeEEEE
Q 018697 187 -T--CESSVQFWDLRSMG----K---TN----SIE--HAH-VRNVDYDTKKKHLLVTAAD-------------ESGIHLW 236 (351)
Q Consensus 187 -~--~d~~i~iwd~~~~~----~---~~----~~~--~~~-v~~~~~~~~~~~~l~~~~~-------------dg~i~i~ 236 (351)
+ .++.|.-|.+..+. . .. .+. ..| ...|+|.|+|. ++++.++ .|.|.-+
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEE
Confidence 2 34566666665421 1 11 111 123 67799999997 6665432 3455555
Q ss_pred ecccC---Ccc---eeEee-CCCCceeEEEecCCCCCeEEE
Q 018697 237 DLRML---KAP---IQELP-GHTHWTWAVCCNPEYDGFILS 270 (351)
Q Consensus 237 d~~~~---~~~---~~~~~-~~~~~v~~~~~~~~~~~~l~s 270 (351)
+.... ..+ ...+. +|. ....++|+|+| .++++
T Consensus 180 ~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G-~L~~~ 218 (347)
T 3das_A 180 TPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQ-RLFAS 218 (347)
T ss_dssp CTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTC-CEEEE
T ss_pred eCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCC-CEEEE
Confidence 54421 000 11222 443 35689999987 55544
No 334
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.91 E-value=1.2 Score=36.08 Aligned_cols=138 Identities=9% Similarity=0.009 Sum_probs=67.3
Q ss_pred CcEEEEecC-----CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC-----CeEEEEEcccCCcC
Q 018697 134 HDKLVSIDE-----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSMGKT 203 (351)
Q Consensus 134 ~~~~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~ 203 (351)
.+++.++.+ ..+.+||+.+..- ...... .........+.+ +++.++.|+.+ ..+.+||+.+.+-.
T Consensus 114 ~lyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 114 MIYVSGGFDGSRRHTSMERYDPNIDQW--SMLGDM-QTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp EEEEECCBCSSCBCCEEEEEETTTTEE--EEEEEC-SSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred EEEEEcccCCCcccceEEEEcCCCCeE--EECCCC-CCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence 356666532 3688888875321 111111 111111122222 55666666543 46888998765321
Q ss_pred --ceeecce--eEEEEcCCCCCcEEEEecCC-----CeEEEEecccCCcceeEeeC---CCCceeEEEecCCCCCeEEEe
Q 018697 204 --NSIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 204 --~~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~ 271 (351)
..+.... ...+.+ ++. +++.|+.+ ..+.+||+.+ .+ ...+.. .......+.+ ++ .+++.|
T Consensus 189 ~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~-~i~v~G 260 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALL--NDH-IYVVGGFDGTAHLSSVEAYNIRT-DS-WTTVTSMTTPRCYVGATVL--RG-RLYAIA 260 (301)
T ss_dssp EECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTT-TE-EEEECCCSSCCBSCEEEEE--TT-EEEEEC
T ss_pred eCCCCCcccccceEEEE--CCE-EEEEeCCCCCcccceEEEEeCCC-Cc-EEECCCCCCcccceeEEEE--CC-EEEEEc
Confidence 1111111 222333 444 77777754 4689999875 32 222221 1111122222 45 677777
Q ss_pred eCC-----CeEEEEEcCC
Q 018697 272 GTD-----STVNLWLVST 284 (351)
Q Consensus 272 ~~d-----g~i~iwd~~~ 284 (351)
+.+ ..+.+||...
T Consensus 261 G~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 261 GYDGNSLLSSIECYDPII 278 (301)
T ss_dssp CBCSSSBEEEEEEEETTT
T ss_pred CcCCCcccccEEEEcCCC
Confidence 765 3577788875
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.77 E-value=2.7 Score=39.37 Aligned_cols=225 Identities=9% Similarity=0.052 Sum_probs=121.4
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeee-eccccceeEEEecCCCCCcEEEEecCC
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL-DAHVGKINCVLWWSSGRHDKLVSIDEE 143 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~d~ 143 (351)
...|.+|.-..+|..-+.+ .+| +..||-. ..+..... ......|.++.-..++. +-++..+
T Consensus 21 ~n~V~~I~qD~~G~lWigT-----~~G-L~ryDG~---------~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigT~~- 82 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGS-----NKG-LFSYDGY---------STQQHFTYGENNNTRIYCGVIIDNTY--LYMGTDN- 82 (758)
T ss_dssp CCCEEEEEECTTSCEEEEE-----SSC-EEEECSS---------CEEECSCTTSTTSSCEEEEEEETTTE--EEEEETT-
T ss_pred cceEEEEEECCCCCEEEEE-----CCC-ccccCCC---------ceEEEEccCCCCCceEEEEEEcCCCc--EEEEeCC-
Confidence 4678888887777655553 444 5556632 11111000 11234688887777765 4455444
Q ss_pred cEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee-----c-ce-eEEEEc
Q 018697 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE-----H-AH-VRNVDY 216 (351)
Q Consensus 144 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-----~-~~-v~~~~~ 216 (351)
-+..||..+..-.. ........|.++.. .++ .|.+++.+ .+..+|..+++.. .+. . .. |.++..
T Consensus 83 Gl~~yd~~~~~f~~-----~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~ 153 (758)
T 3ott_A 83 GILVYNYRADRYEQ-----PETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIR 153 (758)
T ss_dssp EEEEEETTTTEECC-----CSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEE
T ss_pred CeEEEeCCCCEEEC-----cccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEE
Confidence 47889987532111 10011224666654 244 46666655 6888888765422 221 1 12 888888
Q ss_pred CCCCCcEEEEecCCCeEEEEecccCCcceeEeeCC------CCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCC
Q 018697 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH------THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDEL 290 (351)
Q Consensus 217 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 290 (351)
.+++. +.+ |+.+ -+..|+... .+ ...+... ...|.++...+++ ..|..|+. +-+..+|...
T Consensus 154 d~~g~-lWi-gt~~-Gl~~~~~~~-~~-~~~~~~~~~~~~~~~~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~~------ 220 (758)
T 3ott_A 154 TKDNQ-IYV-GTYN-GLCRYIPSN-GK-FEGIPLPVHSSQSNLFVNSLLEDTTR-QCVWIGTE-GYLFQYFPST------ 220 (758)
T ss_dssp CTTCC-EEE-EETT-EEEEEETTT-TE-EEEECCCCCTTCSSCCEEEEEEETTT-TEEEEEEE-EEEEEEETTT------
T ss_pred cCCCC-EEE-EeCC-CHhhCccCC-Cc-eEEecCCCccccccceeEEEEEECCC-CEEEEEEC-CCCeEEcCCC------
Confidence 88887 443 4444 477788654 22 2222211 1247888877766 54444443 4577888765
Q ss_pred CCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecC
Q 018697 291 PSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVK 345 (351)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 345 (351)
.+...........|.++...++|. +.+ |+. +-+.+++..
T Consensus 221 -------------~~~~~~~~l~~~~i~~i~~d~~g~-lWi-gT~-~Gl~~~~~~ 259 (758)
T 3ott_A 221 -------------GQIKQTEAFHNNSIKSLALDGNGD-LLA-GTD-NGLYVYHND 259 (758)
T ss_dssp -------------TEEEEEEEEEEEEEEEEEECTTCC-EEE-EET-TEEEEECCT
T ss_pred -------------CeEEeccCCCCCeEEEEEEcCCCC-EEE-EeC-CceeEEecC
Confidence 222111111234588888888887 444 343 446777654
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.55 E-value=0.1 Score=43.50 Aligned_cols=108 Identities=5% Similarity=-0.020 Sum_probs=64.1
Q ss_pred EEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEE--CCCCCcEEEe--ecCCeEEEEEcccCCcCceeecce-
Q 018697 136 KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW--DPHDVNAVAA--TCESSVQFWDLRSMGKTNSIEHAH- 210 (351)
Q Consensus 136 ~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~- 210 (351)
+++++.||.|.-+|..+++......... ..++....- .+.+..++++ +.||.|..+|..+|.....+..+.
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~----~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPEN----FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGG----SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCc----cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 6777888999988888776555543321 001111110 0122234444 579999999988875544443222
Q ss_pred eE--EEEcC-----------CCCCcEEEEecCCCeEEEEecccCCcceeEee
Q 018697 211 VR--NVDYD-----------TKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 211 v~--~~~~~-----------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (351)
+. -+... ..+. .+++|+.+|.+...|+++ ++.+.++.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~t-G~~~W~~~ 138 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLN-GEIISAFG 138 (339)
T ss_dssp HTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTT-CCEEEEES
T ss_pred eeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCC-CcEEEEEe
Confidence 11 01110 0233 688899999999999998 77777775
No 337
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.46 E-value=1.6 Score=35.41 Aligned_cols=99 Identities=11% Similarity=0.146 Sum_probs=50.7
Q ss_pred CCCcEEEeec-------CCeEEEEEcccCCcC--ceeecce--eEEEEcCCCCCcEEEEecCC-----CeEEEEecccCC
Q 018697 179 HDVNAVAATC-------ESSVQFWDLRSMGKT--NSIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLK 242 (351)
Q Consensus 179 ~~~~l~~~~~-------d~~i~iwd~~~~~~~--~~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 242 (351)
++..++.|+. -..+.+||+.+.+-. ..+.... ...+.+ ++. +++.|+.+ ..+.+||+.+ .
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~-~ 230 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNL-LYAVGGHDGPLVRKSVEVYDPTT-N 230 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCBSSSSBCCCEEEEETTT-T
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCE-EEEECCCCCCcccceEEEEeCCC-C
Confidence 4555566553 245888998765321 1122122 222233 454 77777754 4688999875 3
Q ss_pred cceeEeeCCCCc--eeEEEecCCCCCeEEEeeCCC-----eEEEEEcCC
Q 018697 243 APIQELPGHTHW--TWAVCCNPEYDGFILSAGTDS-----TVNLWLVST 284 (351)
Q Consensus 243 ~~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~ 284 (351)
.-..+.....+ -..+.. -++ .+++.|+.++ .+.+||..+
T Consensus 231 -~W~~~~~~~~~r~~~~~~~-~~~-~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 231 -AWRQVADMNMCRRNAGVCA-VNG-LLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp -EEEEECCCSSCCBSCEEEE-ETT-EEEEECCBCSSSBCCCEEEEETTT
T ss_pred -CEeeCCCCCCccccCeEEE-ECC-EEEEECCcCCCcccccEEEEcCCC
Confidence 22222211111 111221 245 6777777653 478888876
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.66 E-value=6.6 Score=36.74 Aligned_cols=190 Identities=6% Similarity=0.000 Sum_probs=98.2
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcE
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v 145 (351)
..|.++....++...+.+ .+ -+..||... .+...........|.++.. .++. +.++..+ -+
T Consensus 63 ~~i~~i~~d~~g~lWigT-----~~-Gl~~yd~~~---------~~f~~~~~~~~~~i~~i~~-~~g~--lWigt~~-Gl 123 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGT-----DN-GILVYNYRA---------DRYEQPETDFPTDVRTMAL-QGDT--LWLGALN-GL 123 (758)
T ss_dssp SCEEEEEEETTTEEEEEE-----TT-EEEEEETTT---------TEECCCSCCCCSCEEEEEE-ETTE--EEEEETT-EE
T ss_pred ceEEEEEEcCCCcEEEEe-----CC-CeEEEeCCC---------CEEECcccCCCceEEEEEe-cCCc--EEEEcCC-cc
Confidence 467887766665444332 34 467888662 1111111111234666654 3454 4444444 67
Q ss_pred EEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCce-ee-----cce-eEEEEcCC
Q 018697 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS-IE-----HAH-VRNVDYDT 218 (351)
Q Consensus 146 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~-----~~~-v~~~~~~~ 218 (351)
..+|..+.. ..........-....|.++...+++... +++.+ .|..+|..+++.... .. ... |.++...+
T Consensus 124 ~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 200 (758)
T 3ott_A 124 YTYQLQSRK-LTSFDTRRNGLPNNTIYSIIRTKDNQIY-VGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT 200 (758)
T ss_dssp EEEETTTCC-EEEECHHHHCCSCSCEEEEEECTTCCEE-EEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET
T ss_pred eeEeCCCCe-EEEeccCCCCcCCCeEEEEEEcCCCCEE-EEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEEC
Confidence 888876432 1111010000112357788777766644 45544 577788765432110 01 011 77888777
Q ss_pred CCCcEEEEecCCCeEEEEecccCCcceeEee-CCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 219 KKKHLLVTAADESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 219 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
++. .|..|+. +-+..+|..+ .+ +..+. .....|.++...++| .+.+ |+.+ -+.+++...
T Consensus 201 ~~~-~lWigt~-~Gl~~~~~~~-~~-~~~~~~l~~~~i~~i~~d~~g-~lWi-gT~~-Gl~~~~~~~ 260 (758)
T 3ott_A 201 TRQ-CVWIGTE-GYLFQYFPST-GQ-IKQTEAFHNNSIKSLALDGNG-DLLA-GTDN-GLYVYHNDT 260 (758)
T ss_dssp TTT-EEEEEEE-EEEEEEETTT-TE-EEEEEEEEEEEEEEEEECTTC-CEEE-EETT-EEEEECCTT
T ss_pred CCC-EEEEEEC-CCCeEEcCCC-Ce-EEeccCCCCCeEEEEEEcCCC-CEEE-EeCC-ceeEEecCC
Confidence 665 3444554 4678888764 32 22221 123458888888777 4443 4444 577888765
No 339
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.49 E-value=3.7 Score=33.48 Aligned_cols=59 Identities=10% Similarity=0.151 Sum_probs=32.8
Q ss_pred CCCcEEEeec------CCeEEEEEcccCC--cCceeecce--eEEEEcCCCCCcEEEEecCCC-----eEEEEeccc
Q 018697 179 HDVNAVAATC------ESSVQFWDLRSMG--KTNSIEHAH--VRNVDYDTKKKHLLVTAADES-----GIHLWDLRM 240 (351)
Q Consensus 179 ~~~~l~~~~~------d~~i~iwd~~~~~--~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 240 (351)
+++.++.|+. -..+.+||+.+.+ .+..+..+. ...+.+ ++. +++.|+.++ .+.+||+.+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGR-IIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE-EEEEEEECSSSEEEEEEEEETTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCE-EEEEeccCCCCccceEEEEECCC
Confidence 4556666664 2468889987653 122222222 222333 454 777777543 588888875
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.39 E-value=3.9 Score=33.45 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=48.7
Q ss_pred CCCcEEEeecC-------CeEEEEEcccCCcC--ceeecce-eEEEEcCCCCCcEEEEecC------CCeEEEEecccCC
Q 018697 179 HDVNAVAATCE-------SSVQFWDLRSMGKT--NSIEHAH-VRNVDYDTKKKHLLVTAAD------ESGIHLWDLRMLK 242 (351)
Q Consensus 179 ~~~~l~~~~~d-------~~i~iwd~~~~~~~--~~~~~~~-v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~ 242 (351)
++..++.|+.+ ..+.+||+.+.+-. ..+.... -.+++. .++. +++.|+. -..+.+||+.+ .
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~-~ 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKK-G 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTT-T
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCC-C
Confidence 45666666643 35778888765321 1122111 112222 3454 6777764 24589999875 3
Q ss_pred cceeEeeCCC--CceeEEEecCCCCCeEEEeeCC-----CeEEEEEcCC
Q 018697 243 APIQELPGHT--HWTWAVCCNPEYDGFILSAGTD-----STVNLWLVST 284 (351)
Q Consensus 243 ~~~~~~~~~~--~~v~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~ 284 (351)
+ -..+.... ..-.+++. -++ .+++.|+.+ ..+.+||+.+
T Consensus 186 ~-W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 186 D-WKDLAPMKTPRSMFGVAI-HKG-KIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp E-EEEECCCSSCCBSCEEEE-ETT-EEEEEEEEETTEEEEEEEEEETTT
T ss_pred E-EEECCCCCCCcccceEEE-ECC-EEEEEcCcCCCCccceEEEEECCC
Confidence 2 22222111 11112222 244 666767643 2467788876
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.87 E-value=3.3 Score=34.54 Aligned_cols=91 Identities=10% Similarity=-0.049 Sum_probs=42.2
Q ss_pred cEEEEe-cCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeec-C---------CeEEEEEcccCC--
Q 018697 135 DKLVSI-DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-E---------SSVQFWDLRSMG-- 201 (351)
Q Consensus 135 ~~~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d---------~~i~iwd~~~~~-- 201 (351)
+++.++ ....+.+||+.+.....................+.+ ++..++.|+. + ..+.+||+.+.+
T Consensus 22 iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~ 99 (357)
T 2uvk_A 22 VYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWV 99 (357)
T ss_dssp EEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEE
T ss_pred EEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEE
Confidence 566664 346788999864222222221111000111222222 4566666654 2 468889987653
Q ss_pred cCceee-cce--eEEEEcCCCCCcEEEEecCC
Q 018697 202 KTNSIE-HAH--VRNVDYDTKKKHLLVTAADE 230 (351)
Q Consensus 202 ~~~~~~-~~~--v~~~~~~~~~~~~l~~~~~d 230 (351)
.+..+. ... ..++. .++. +++.|+.+
T Consensus 100 ~~~~~~p~~r~~~~~~~--~~~~-iyv~GG~~ 128 (357)
T 2uvk_A 100 KLMSHAPMGMAGHVTFV--HNGK-AYVTGGVN 128 (357)
T ss_dssp ECSCCCSSCCSSEEEEE--ETTE-EEEEECCC
T ss_pred ECCCCCCcccccceEEE--ECCE-EEEEeCcC
Confidence 122222 122 22233 3555 77778754
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.57 E-value=0.27 Score=43.63 Aligned_cols=118 Identities=12% Similarity=0.097 Sum_probs=71.0
Q ss_pred CCcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccC----CCCCCcceeeeeeeccccceeEEEecCCCCCcEEEE
Q 018697 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYG----QLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVS 139 (351)
Q Consensus 64 h~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~----~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 139 (351)
-....+.+..+|||++++++ |-.+.++.|++++.... ....+.......... .-.....+|.++|. ..++
T Consensus 321 ~pksPHGv~vsPDGkyi~v~---GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~--aYTt 394 (638)
T 3sbq_A 321 VPKNPHGCNTSSDGKYFIAA---GKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGN--AYTT 394 (638)
T ss_dssp ESSSCCCEEECTTSCEEEEE---CTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSE--EEEE
T ss_pred CCCCCcceeeCCCCCEEEEc---CCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCc--eEee
Confidence 34566788899999999997 67888999999984211 000111122223322 23457789999995 6666
Q ss_pred -ecCCcEEEEEcCCC------CCCcccc----cccccCcccceeeeEECCCCCcEEEee
Q 018697 140 -IDEENIFLWSLDCS------NKNAQVQ----SKQSSGMLHYLSGGAWDPHDVNAVAAT 187 (351)
Q Consensus 140 -~~d~~v~iwd~~~~------~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (351)
--|.+|.-|++... ++...+. .....+|.....+-.-.|+|++|++..
T Consensus 395 lfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 395 LFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp ETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 57999999999742 2211221 122333433333334467888888874
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.38 E-value=9 Score=35.53 Aligned_cols=148 Identities=8% Similarity=0.071 Sum_probs=73.4
Q ss_pred CCcEEEEecC----CcEEEEEcCCCCCCccccc---ccccCcccceeeeEECCCCCcEEEeecC------CeEEEEEccc
Q 018697 133 RHDKLVSIDE----ENIFLWSLDCSNKNAQVQS---KQSSGMLHYLSGGAWDPHDVNAVAATCE------SSVQFWDLRS 199 (351)
Q Consensus 133 ~~~~~~~~~d----~~v~iwd~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~ 199 (351)
..+++.++.+ ..+.+||+.+..-...... ............+.+..++..++.|+.+ ..+.+||+.+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence 3356666542 4688888875432111101 0011111122223332256666666632 3578888876
Q ss_pred CC--cCceeecce-eEEEEcCCCCCcEEEEecCCC--eEEEEecccCCcceeEeeC------CCCceeEEEecCC-CCCe
Q 018697 200 MG--KTNSIEHAH-VRNVDYDTKKKHLLVTAADES--GIHLWDLRMLKAPIQELPG------HTHWTWAVCCNPE-YDGF 267 (351)
Q Consensus 200 ~~--~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~------~~~~v~~~~~~~~-~~~~ 267 (351)
.+ .+..+..+. -.+++...++. +++.|+.++ .+.+||..+ . .-..+.. .......+.+... + .+
T Consensus 478 ~~W~~~~~~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t-~-~W~~~~~~g~~p~~r~~~~a~v~~~~~~-~i 553 (695)
T 2zwa_A 478 REWSMIKSLSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTE-E-IFKDVTPKDEFFQNSLVSAGLEFDPVSK-QG 553 (695)
T ss_dssp TEEEECCCCSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTT-T-EEEECCCSSGGGGSCCBSCEEEEETTTT-EE
T ss_pred CcEEECCCCCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCC-C-ceEEccCCCCCCCcccceeEEEEeCCCC-EE
Confidence 43 222222222 22233323565 777787554 689999875 2 2222221 1112233455554 4 67
Q ss_pred EEEeeC--C-----CeEEEEEcCC
Q 018697 268 ILSAGT--D-----STVNLWLVST 284 (351)
Q Consensus 268 l~s~~~--d-----g~i~iwd~~~ 284 (351)
++.|+. + ..+.+||+.+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECT
T ss_pred EEECCcCCCCCeeeCcEEEEEccC
Confidence 777775 2 3588889887
No 344
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=90.38 E-value=11 Score=34.96 Aligned_cols=201 Identities=9% Similarity=0.076 Sum_probs=100.3
Q ss_pred eeee-eCCCCCceEEEEeecCCc-ceEEEEEcccccCCCCCCcceeee-eee-cccc------ceeEEEecCCCCCcEEE
Q 018697 69 WDLS-SCPFDQRIFSTVFSTGES-YGAAIWQIPELYGQLNSPQLERIA-ALD-AHVG------KINCVLWWSSGRHDKLV 138 (351)
Q Consensus 69 ~~i~-~~~~~~~l~~~~~~~~~d-~~i~vw~~~~~~~~~~~~~~~~~~-~~~-~h~~------~v~~~~~~~~~~~~~~~ 138 (351)
..+. ++|++++++.....||.| ..++++|+. +.+.+. .+. .-+. ....++|..++. +++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~---------t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~-~~~~ 201 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLE---------KKDFVKNGFEPITNSGKLLEGKFTYPTWINKDT-IIFN 201 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETT---------TTEECTTCSCCBCTTCCBCCEETCCEEEEETTE-EEEC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECC---------cCCcCCCCcccccccccccccccceeeEECCCE-EEEE
Confidence 3455 899999888777666666 469999998 333321 111 0000 112346663333 2332
Q ss_pred E----------ecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCc-----EEEee---cCCeEEEEEcccC
Q 018697 139 S----------IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN-----AVAAT---CESSVQFWDLRSM 200 (351)
Q Consensus 139 ~----------~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~---~d~~i~iwd~~~~ 200 (351)
+ +.-..|+.|.+.+......++...... ....+...++++++ +++.+ ....+.+.|+...
T Consensus 202 ~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 279 (711)
T 4hvt_A 202 LVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKE--YIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYK 279 (711)
T ss_dssp CCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTT--SCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSS
T ss_pred eCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCC--ceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCC
Confidence 1 123568888887654333332222111 12233445666664 33322 2245666665531
Q ss_pred C-cCceeecceeEEEEcCCCCCcEEEEe----------cCCCeEEEEecccCC------cceeE-ee-CCCCceeEEEec
Q 018697 201 G-KTNSIEHAHVRNVDYDTKKKHLLVTA----------ADESGIHLWDLRMLK------APIQE-LP-GHTHWTWAVCCN 261 (351)
Q Consensus 201 ~-~~~~~~~~~v~~~~~~~~~~~~l~~~----------~~dg~i~i~d~~~~~------~~~~~-~~-~~~~~v~~~~~~ 261 (351)
. ....+..+.-..+..+.++. +++.. ...+.|...|+.... ...+. +. .....+..+.|.
T Consensus 280 ~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 358 (711)
T 4hvt_A 280 NLKLQKINMPSDATLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT 358 (711)
T ss_dssp SCEEEECCSCTTCEEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC
T ss_pred CCcceEeecCCcceEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEE
Confidence 1 11222211111122334554 44422 146778999987631 12333 32 233467788888
Q ss_pred CCCCCeEEEeeCCCe--EEEEEcCC
Q 018697 262 PEYDGFILSAGTDST--VNLWLVST 284 (351)
Q Consensus 262 ~~~~~~l~s~~~dg~--i~iwd~~~ 284 (351)
.+ .++++...++. |.++|...
T Consensus 359 ~~--~l~~~~~~~~~~~l~~~~~~~ 381 (711)
T 4hvt_A 359 KD--RVFLATYDNVVAKVVTFTLEN 381 (711)
T ss_dssp SS--CEEEEEEETTEEEEEEECEET
T ss_pred CC--EEEEEEEECCEEEEEEEECCC
Confidence 75 57777777774 56666554
No 345
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.08 E-value=6.6 Score=31.85 Aligned_cols=137 Identities=5% Similarity=-0.035 Sum_probs=65.9
Q ss_pred cEEEEecC-----CcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecC-----CeEEEEEcccCCc--
Q 018697 135 DKLVSIDE-----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSMGK-- 202 (351)
Q Consensus 135 ~~~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~-- 202 (351)
+++.++.+ ..+.+||+.+..- ...... .........+.+ ++..++.|+.+ ..+.+||+.+.+-
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERDEW--HLVAPM-LTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTTEE--EECCCC-SSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred EEEEcCCCCCcccccEEEECCCCCeE--eECCCC-CccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56665432 4688888875321 111111 111111222222 45666666543 4688899876531
Q ss_pred Cceeecce--eEEEEcCCCCCcEEEEecCC-----CeEEEEecccCCcceeEeeCC---CCceeEEEecCCCCCeEEEee
Q 018697 203 TNSIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAPIQELPGH---THWTWAVCCNPEYDGFILSAG 272 (351)
Q Consensus 203 ~~~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~~ 272 (351)
+..+.... ...+.+ ++. +++.|+.+ ..+.+||+.+ . .-..+... ......+.+ ++ .+++.|+
T Consensus 199 ~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~-~-~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG 270 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDVET-E-TWTFVAPMKHRRSALGITVH--QG-RIYVLGG 270 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTT-T-EEEECCCCSSCCBSCEEEEE--TT-EEEEECC
T ss_pred CCCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeCCC-C-cEEECCCCCCCccceEEEEE--CC-EEEEEcC
Confidence 11122122 222333 454 77777654 5689999875 2 22222211 111112222 44 6777777
Q ss_pred CC-----CeEEEEEcCC
Q 018697 273 TD-----STVNLWLVST 284 (351)
Q Consensus 273 ~d-----g~i~iwd~~~ 284 (351)
.+ ..+.+||+.+
T Consensus 271 ~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 271 YDGHTFLDSVECYDPDT 287 (308)
T ss_dssp BCSSCBCCEEEEEETTT
T ss_pred cCCCcccceEEEEcCCC
Confidence 54 3567777765
No 346
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.47 E-value=8.2 Score=32.04 Aligned_cols=47 Identities=9% Similarity=0.020 Sum_probs=24.2
Q ss_pred CeEEEEEcccCCcC--ceeecce-e-EEEEcCCCCCcEEEEecC------CCeEEEEec
Q 018697 190 SSVQFWDLRSMGKT--NSIEHAH-V-RNVDYDTKKKHLLVTAAD------ESGIHLWDL 238 (351)
Q Consensus 190 ~~i~iwd~~~~~~~--~~~~~~~-v-~~~~~~~~~~~~l~~~~~------dg~i~i~d~ 238 (351)
..+.+||+.+.+-. ..+.... . .+++.. ++. +++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDK-TWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTE-EEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCE-EEEEeeecCCCcccCceEEEEe
Confidence 57889998765321 1111111 1 222222 444 6777763 345777876
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=89.30 E-value=7.8 Score=31.57 Aligned_cols=59 Identities=8% Similarity=0.112 Sum_probs=31.5
Q ss_pred CCCcEEEeec------CCeEEEEEcccCCc--Cceeecce--eEEEEcCCCCCcEEEEecCC-----CeEEEEeccc
Q 018697 179 HDVNAVAATC------ESSVQFWDLRSMGK--TNSIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRM 240 (351)
Q Consensus 179 ~~~~l~~~~~------d~~i~iwd~~~~~~--~~~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 240 (351)
++..++.|+. -..+.+||+.+.+- +..+.... ...+.+ ++. +++.|+.+ ..+.+||+.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGK-IVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEEEEEETTEEEEEEEEEETTT
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCE-EEEEcCcCCCCccceEEEEECCC
Confidence 4565666653 24688999886532 11111111 222232 444 67777643 3577888875
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.95 E-value=11 Score=32.88 Aligned_cols=107 Identities=13% Similarity=0.055 Sum_probs=57.7
Q ss_pred cceeEEEecCCCC-CcEEEEecCCcEEEEEcCCCCCCccccc---cccc----CcccceeeeEECCC---CCcEEEe-ec
Q 018697 121 GKINCVLWWSSGR-HDKLVSIDEENIFLWSLDCSNKNAQVQS---KQSS----GMLHYLSGGAWDPH---DVNAVAA-TC 188 (351)
Q Consensus 121 ~~v~~~~~~~~~~-~~~~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~----~~~~~v~~~~~~~~---~~~l~~~-~~ 188 (351)
...+.|+|.|++. . ++++...|.|++++.........+.. .... .....+..++|+|+ ...|++. +.
T Consensus 14 ~~P~~~a~~pdG~~r-l~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQR-LFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCC-EEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeE-EEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4567899999995 4 56666789999997542211111110 0100 11236788999996 3344433 22
Q ss_pred --C----------CeEEEEEcccC----------CcCceee---cce-eEEEEcCCCCCcEEEEecC
Q 018697 189 --E----------SSVQFWDLRSM----------GKTNSIE---HAH-VRNVDYDTKKKHLLVTAAD 229 (351)
Q Consensus 189 --d----------~~i~iwd~~~~----------~~~~~~~---~~~-v~~~~~~~~~~~~l~~~~~ 229 (351)
+ ..|.-|.+..+ +.+..+. ..| ...|+|.|||. ++++.++
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 1 13444555421 1111222 124 88999999997 5555443
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.72 E-value=15 Score=34.05 Aligned_cols=139 Identities=12% Similarity=0.082 Sum_probs=65.8
Q ss_pred eEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCC--cEEEEEcCCCCCCcccccccccCccc
Q 018697 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE--NIFLWSLDCSNKNAQVQSKQSSGMLH 169 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~ 169 (351)
.+.+||... ..+..+..+......- +++...++. +++.++.++ .+.+||+.+..-..............
T Consensus 469 dv~~yd~~t-------~~W~~~~~~p~~R~~h-~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 469 DNWIFDMKT-------REWSMIKSLSHTRFRH-SACSLPDGN-VLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp CCEEEETTT-------TEEEECCCCSBCCBSC-EEEECTTSC-EEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCC
T ss_pred cEEEEeCCC-------CcEEECCCCCCCcccc-eEEEEcCCE-EEEECCCCCCCCEEEEECCCCceEEccCCCCCCCccc
Confidence 477788762 2344443332211111 222223444 566765433 78999988643111110000111111
Q ss_pred ceeeeEECCC-CCcEEEeec--C-----CeEEEEEcccCCc-----Cceee----cce-eEEEEcCCCCCcEEEEecC--
Q 018697 170 YLSGGAWDPH-DVNAVAATC--E-----SSVQFWDLRSMGK-----TNSIE----HAH-VRNVDYDTKKKHLLVTAAD-- 229 (351)
Q Consensus 170 ~v~~~~~~~~-~~~l~~~~~--d-----~~i~iwd~~~~~~-----~~~~~----~~~-v~~~~~~~~~~~~l~~~~~-- 229 (351)
...++.+..+ +..++.|+. + +.+.+||+.+..- -..+. .+. -.+++...++. +++.|+.
T Consensus 540 ~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~ 618 (695)
T 2zwa_A 540 VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSP 618 (695)
T ss_dssp BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCS
T ss_pred ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccC
Confidence 2233455544 555666654 2 4688999987762 11111 111 11222223254 7777774
Q ss_pred ------CCeEEEEeccc
Q 018697 230 ------ESGIHLWDLRM 240 (351)
Q Consensus 230 ------dg~i~i~d~~~ 240 (351)
...+.+||+.+
T Consensus 619 ~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 619 SGLFDRTNSIISLDPLS 635 (695)
T ss_dssp SCCCCTTTSEEEEETTT
T ss_pred CCCCCCCCeEEEEECCC
Confidence 34689999875
No 350
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.14 E-value=9.1 Score=30.90 Aligned_cols=171 Identities=8% Similarity=-0.029 Sum_probs=80.4
Q ss_pred ceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecC------CcEEEEEcCCCCCCcccccccc
Q 018697 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE------ENIFLWSLDCSNKNAQVQSKQS 164 (351)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d------~~v~iwd~~~~~~~~~~~~~~~ 164 (351)
..+.+||... .++..+..+.........+.+ ++. +++.++.+ ..+.+||+.+..- ......
T Consensus 70 ~~~~~~d~~~-------~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W--~~~~~~- 136 (306)
T 3ii7_A 70 KRMDCYNVVK-------DSWYSKLGPPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTESW--HTKPSM- 136 (306)
T ss_dssp CEEEEEETTT-------TEEEEEECCSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTEE--EEECCC-
T ss_pred ceEEEEeCCC-------CeEEECCCCCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCce--EeCCCC-
Confidence 4577788762 234443333222111222222 333 56666543 4688899875421 111111
Q ss_pred cCcccceeeeEECCCCCcEEEeec---------CCeEEEEEcccCCc--Cceeecce--eEEEEcCCCCCcEEEEecCC-
Q 018697 165 SGMLHYLSGGAWDPHDVNAVAATC---------ESSVQFWDLRSMGK--TNSIEHAH--VRNVDYDTKKKHLLVTAADE- 230 (351)
Q Consensus 165 ~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~--~~~~~~~~--v~~~~~~~~~~~~l~~~~~d- 230 (351)
.........+.+ +++.++.|+. -..+.+||+.+.+- +..+.... ...+.+ ++. +++.|+.+
T Consensus 137 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~ 211 (306)
T 3ii7_A 137 LTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDK-IFAVGGQNG 211 (306)
T ss_dssp SSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCEET
T ss_pred cCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCE-EEEEeCCCC
Confidence 110111122222 4555566653 34588899876532 11121111 222222 454 77777653
Q ss_pred ----CeEEEEecccCCcceeEeeC---CCCceeEEEecCCCCCeEEEeeCC-----CeEEEEEcCC
Q 018697 231 ----SGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFILSAGTD-----STVNLWLVST 284 (351)
Q Consensus 231 ----g~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~ 284 (351)
..+.+||+.+ . .-..+.. .......+.+ ++ .+++.|+.+ ..+.+||...
T Consensus 212 ~~~~~~~~~yd~~~-~-~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 212 LGGLDNVEYYDIKL-N-EWKMVSPMPWKGVTVKCAAV--GS-IVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TEEBCCEEEEETTT-T-EEEECCCCSCCBSCCEEEEE--TT-EEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCCCceEEEeeCCC-C-cEEECCCCCCCccceeEEEE--CC-EEEEEeCcCCCeeeeeEEEEcCCC
Confidence 4688999875 2 1222211 1111222222 44 677777754 4678888876
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=87.84 E-value=9.4 Score=30.70 Aligned_cols=220 Identities=12% Similarity=0.046 Sum_probs=113.3
Q ss_pred ceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeeccccceeEEEecCCCCCcEEEEecCCcEE
Q 018697 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIF 146 (351)
Q Consensus 67 ~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~ 146 (351)
.|..++.... ..++. . |+.|..|-.....+ . ..+. .....|..++...... ++. . ||.|+
T Consensus 25 ~i~~ia~G~~--h~~~l----~-~G~v~~wG~n~~Gq-l----g~p~----~~~~~i~~ia~G~~hs--~~l-~-~G~v~ 84 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL----K-GGKVLGWGANLNGQ-L----TMPA----ATQSGVDAIAAGNYHS--LAL-K-DGEVI 84 (282)
T ss_dssp SCCEEEECSS--EEEEE----E-TTEEEEEECCSSST-T----SCCG----GGGSCCCEEEECSSEE--EEE-E-TTEEE
T ss_pred CCcEEEeCCC--eEEEE----E-CCEEEEEeCCCCCC-C----CCCc----cCCCCEEEEEeCCCEE--EEE-E-CCEEE
Confidence 5666665432 22332 3 78888887552111 0 0010 1123566666554433 333 4 89999
Q ss_pred EEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCc-eeecce-eEEEEcCCCCCcEE
Q 018697 147 LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN-SIEHAH-VRNVDYDTKKKHLL 224 (351)
Q Consensus 147 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l 224 (351)
.|-.+...+....... ...|..++... ...++-. +|.|+.|-....-.+. ...... |..++...... +
T Consensus 85 ~wG~n~~Gqlg~P~~~-----~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~--~ 154 (282)
T 3qhy_B 85 AWGGNEDGQTTVPAEA-----RSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA--L 154 (282)
T ss_dssp EEECCTTSTTCCCGGG-----SSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE--E
T ss_pred EeeCCCCCCCCCCccc-----CCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE--E
Confidence 9987754443221111 12577776653 3344445 9999999865432221 111112 77776655442 3
Q ss_pred EEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCccccc
Q 018697 225 VTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (351)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
+. . ||.|+.|-.....+.-... .-...|..++..... .++. .||.|..|-.... +
T Consensus 155 ~l-~-~G~v~~wG~n~~gqlg~p~-~~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~~------------------g 209 (282)
T 3qhy_B 155 AV-K-NGGVIAWGDNYFGQTTVPA-EAQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNRY------------------K 209 (282)
T ss_dssp EE-E-TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSSE--EEEE--ETTEEEEEECCTT------------------S
T ss_pred EE-E-CCEEEEecCCCCCCCCCce-ecCCCeEEEEecCCE--EEEE--ECCeEEEEECCCC------------------C
Confidence 32 2 6999999876544321111 113457777765533 3333 5999999976652 1
Q ss_pred ccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 305 SLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 305 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
++- .-......|..++..... .++.. ||.|+.|--..
T Consensus 210 qlg-~p~~~~~~v~~i~~G~~h--~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 210 QTT-VPTEALSGVSAIASGEWY--SLALK--NGKVIAWGSSR 246 (282)
T ss_dssp TTC-CCGGGGSSCCEEEECSSC--EEEEE--TTEEEEESTTC
T ss_pred CCC-CCcccCCCceEEEcCCCE--EEEEE--CCEEEEecCCC
Confidence 110 000111246666655443 23333 88888886554
No 352
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.40 E-value=0.6 Score=38.89 Aligned_cols=102 Identities=13% Similarity=0.034 Sum_probs=61.0
Q ss_pred CcEEEeecCCeEEEEEcccCCcCceeecc--e-eEEEE---cCCCCCcEEEEe-cCCCeEEEEecccCCcceeEeeC---
Q 018697 181 VNAVAATCESSVQFWDLRSMGKTNSIEHA--H-VRNVD---YDTKKKHLLVTA-ADESGIHLWDLRMLKAPIQELPG--- 250 (351)
Q Consensus 181 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~-v~~~~---~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~--- 250 (351)
..+++++.||.|+-+|..+|+....+... . +.... ...++. .++.. ..||.|..++..+ +.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~-~~vv~p~~dG~l~a~~~~~-G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYE-TLIIEPFGDGNIYYFNAHQ-GLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSE-EEEECCSTTTEEEEEETTT-EEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCc-EEEEEECCCCEEEEEECCC-CcEEeeeccccc
Confidence 46888999999999999999888887754 1 11111 111222 44443 6899999999765 322222221
Q ss_pred -CCCceeE---EEe-cC----CCCCeEEEeeCCCeEEEEEcCCC
Q 018697 251 -HTHWTWA---VCC-NP----EYDGFILSAGTDSTVNLWLVSTS 285 (351)
Q Consensus 251 -~~~~v~~---~~~-~~----~~~~~l~s~~~dg~i~iwd~~~~ 285 (351)
...++.. ... .+ .+ ..+++|+.++.+...|.+++
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~-g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVED-EKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp HTTCSEEEECC----------CC-EEEEECEEEEEEEEEETTTC
T ss_pred eeccccccCCCceeecccccccC-CEEEEEecCCEEEEEECCCC
Confidence 1122211 000 00 23 57888999999999888874
No 353
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=81.73 E-value=23 Score=29.95 Aligned_cols=141 Identities=10% Similarity=0.109 Sum_probs=71.1
Q ss_pred eEEEEEcccC--CcCceeecc-------e-eEEEEcC---CC----CCcEEEEecCCCeEEEEecccCCcceeEee----
Q 018697 191 SVQFWDLRSM--GKTNSIEHA-------H-VRNVDYD---TK----KKHLLVTAADESGIHLWDLRMLKAPIQELP---- 249 (351)
Q Consensus 191 ~i~iwd~~~~--~~~~~~~~~-------~-v~~~~~~---~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---- 249 (351)
+|.+||+.+. +.++.+..+ . +..+.+. |. +.+..++=...+.|.+||+.+ ++..+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~-~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKK-QDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTT-TEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCC-CcEEEEccCCCc
Confidence 4555666665 544444321 1 6666666 32 333445555678899999986 43322221
Q ss_pred ----------CC----CCceeEEEecCC----CCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeec
Q 018697 250 ----------GH----THWTWAVCCNPE----YDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS 311 (351)
Q Consensus 250 ----------~~----~~~v~~~~~~~~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (351)
+. ...+..|+++|+ + +.|+-....+ -++|.+.+..-.... ....+..+.
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~-~~LYf~plss-~~ly~V~T~~L~~~~-----------~~~~v~~~G 269 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGN-RPAYYLAGSA-IKVYSVNTKELKQKG-----------GKLNPELLG 269 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSC-CEEEEEESSC-SEEEEEEHHHHSSTT-----------CCCCCEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCC-eEEEEEECCC-CcEEEEEHHHhhCcc-----------hhhceEEee
Confidence 10 135778888887 4 4454443333 234444321000000 011122221
Q ss_pred --cccceEEEEEeC-CCCCceEEEeeeCCeEEEeecCc
Q 018697 312 --DYEDSVYGLAWS-SREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 312 --~~~~~v~~~~~~-~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
+....-..++.. .+|. ++++--..+.|..|+...
T Consensus 270 ~kg~~s~~~~~~~D~~~G~-ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 270 NRGKYNDAIALAYDPKTKV-IFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp ECCTTCCEEEEEECTTTCE-EEEEESSSSEEEEEETTS
T ss_pred ecCCCCCcceEEEeCCCCe-EEEEeccCCeEEEEeCCC
Confidence 111223345665 5665 677777888999999864
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=80.48 E-value=21 Score=28.66 Aligned_cols=181 Identities=10% Similarity=0.018 Sum_probs=96.6
Q ss_pred ceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEcccCC
Q 018697 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG 201 (351)
Q Consensus 122 ~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 201 (351)
.|..++...... ++. . ||.|+.|-.+...+...... ....|..++..... .++. . ||.|+.|-....-
T Consensus 25 ~i~~ia~G~~h~--~~l-~-~G~v~~wG~n~~Gqlg~p~~-----~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYFHG--LAL-K-GGKVLGWGANLNGQLTMPAA-----TQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSSEE--EEE-E-TTEEEEEECCSSSTTSCCGG-----GGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTS
T ss_pred CCcEEEeCCCeE--EEE-E-CCEEEEEeCCCCCCCCCCcc-----CCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCC
Confidence 466665544322 333 4 89999998775444332111 12256677665432 2333 4 8999999865432
Q ss_pred cCce-eecc-eeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEE
Q 018697 202 KTNS-IEHA-HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 279 (351)
Q Consensus 202 ~~~~-~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~i 279 (351)
.+.. .... .|..++...... ++. . +|.|+.|-.....+.-.. ......|..++..... .+.-. ||.|..
T Consensus 93 qlg~P~~~~~~v~~ia~G~~hs--~al-~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~~~---~~~l~-~G~v~~ 163 (282)
T 3qhy_B 93 QTTVPAEARSGVDAIAAGAWAS--YAL-K-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGVYT---ALAVK-NGGVIA 163 (282)
T ss_dssp TTCCCGGGSSSEEEEEEETTEE--EEE-E-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSSE---EEEEE-TTEEEE
T ss_pred CCCCCcccCCCeEEEECcCCEE--EEE-e-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEcccCE---EEEEE-CCEEEE
Confidence 2211 1111 266776655542 333 3 899999987654432111 1123457777665433 22234 799999
Q ss_pred EEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeEEEeecCc
Q 018697 280 WLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKP 346 (351)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 346 (351)
|-.... +++ ..-..-...|..++..... .++. .||.|+.|-...
T Consensus 164 wG~n~~------------------gql-g~p~~~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 164 WGDNYF------------------GQT-TVPAEAQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp EECCTT------------------STT-SCCGGGGSSEEEEEECSSE--EEEE--ETTEEEEEECCT
T ss_pred ecCCCC------------------CCC-CCceecCCCeEEEEecCCE--EEEE--ECCeEEEEECCC
Confidence 977651 111 1111112457777765543 3433 599999997544
No 355
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=78.34 E-value=46 Score=31.38 Aligned_cols=155 Identities=7% Similarity=0.032 Sum_probs=70.7
Q ss_pred CcceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec----cccceeEEEecCCCCCcEEEEe
Q 018697 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA----HVGKINCVLWWSSGRHDKLVSI 140 (351)
Q Consensus 65 ~~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~~~~~~ 140 (351)
.+.|.+|+++|....++.+ +...+.|...+=. ..+++.+..... ....|.+|++.|.....++++.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a---~~~~ggv~rS~Dg-------G~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYA---RTDIGGAYRWDAG-------TSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEE---EESSSCEEEEETT-------TTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEE---EecCCCEEEecCC-------CCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 4689999999976544433 2344444333211 113333322111 1346899999986543344543
Q ss_pred cCCc----EEEEEcCCCCCCccccccccc--C---cccceeeeEECCCC-CcEEEeecCCeEEEEEcccCCcCceee---
Q 018697 141 DEEN----IFLWSLDCSNKNAQVQSKQSS--G---MLHYLSGGAWDPHD-VNAVAATCESSVQFWDLRSMGKTNSIE--- 207 (351)
Q Consensus 141 ~d~~----v~iwd~~~~~~~~~~~~~~~~--~---~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~--- 207 (351)
.+.. -.||.-..+............ + ....+..++++|.. ..++++...+.|. .....++.-..+.
T Consensus 84 g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~ 162 (789)
T 1sqj_A 84 GRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIP 162 (789)
T ss_dssp CSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSC
T ss_pred CccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCc
Confidence 2211 345544444433332221100 0 01134567787754 3455554333332 1222222111111
Q ss_pred ----cce-eEEEEcCCCCCcEEEEecCC
Q 018697 208 ----HAH-VRNVDYDTKKKHLLVTAADE 230 (351)
Q Consensus 208 ----~~~-v~~~~~~~~~~~~l~~~~~d 230 (351)
... +..+.++|.....++.+..+
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 112 78889988644345545443
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=75.92 E-value=35 Score=28.74 Aligned_cols=144 Identities=6% Similarity=-0.063 Sum_probs=68.0
Q ss_pred ceeEEEecCCC-CCcEEEEecCCcEEEEEcCCCCCCccccccc---c------------cCcccceeeeEECCC-CCcEE
Q 018697 122 KINCVLWWSSG-RHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ---S------------SGMLHYLSGGAWDPH-DVNAV 184 (351)
Q Consensus 122 ~v~~~~~~~~~-~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~---~------------~~~~~~v~~~~~~~~-~~~l~ 184 (351)
.|.++++.|.. ...+.++...+.|.. ...+.......... . ......+.++.++|. ...++
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~--S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFR--STDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEE--ESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEE--EcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 57889998742 223666555555443 33333332222110 0 011235778999884 45566
Q ss_pred EeecCCeEEEEEcccCCcCceee--------------cce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee
Q 018697 185 AATCESSVQFWDLRSMGKTNSIE--------------HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 185 ~~~~d~~i~iwd~~~~~~~~~~~--------------~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (351)
++..++.|...+ ..++.-..+. ... +.+++++|.....++.+...+ |...+- .++....+.
T Consensus 194 vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D--~G~tW~~~~ 269 (394)
T 3b7f_A 194 IGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR--REGVWKRIG 269 (394)
T ss_dssp EEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET--TTTEEECGG
T ss_pred EEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC--CCCcceECC
Confidence 665555444332 1122111110 023 788999987433566565544 443332 122222221
Q ss_pred C--CC---CceeEEEecCCCCCeEEEe
Q 018697 250 G--HT---HWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 250 ~--~~---~~v~~~~~~~~~~~~l~s~ 271 (351)
. .. ..+..+.++|..+..|..+
T Consensus 270 ~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 270 DAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp GGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCCCCCCccceEEEEECCCCCCEEEEE
Confidence 1 11 3356788887543445444
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.74 E-value=9.8 Score=36.76 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=31.4
Q ss_pred ceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee
Q 018697 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE 207 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 207 (351)
.+.+++..++..++++.+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677777888899999999999999999988765543
No 358
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=65.44 E-value=50 Score=26.33 Aligned_cols=112 Identities=10% Similarity=0.032 Sum_probs=65.8
Q ss_pred ceeeeEECC-CCCcEEEeecCCeEEEEEcccCC------cCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccC
Q 018697 170 YLSGGAWDP-HDVNAVAATCESSVQFWDLRSMG------KTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241 (351)
Q Consensus 170 ~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~------~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 241 (351)
.|..+.... ++..++..+.+|.++...+..-. ....+..+. +..+....... .++..++.|.+..+.....
T Consensus 69 ~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~-~ill~T~~G~~~r~~~~ei 147 (276)
T 3no0_A 69 KIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDET-HILLFTKKGRVARFSVREV 147 (276)
T ss_dssp CEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSC-EEEEEETTSEEEEEEGGGS
T ss_pred EEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCC-EEEEEECCCEEEEEEhhhC
Confidence 455553321 46789999999999998876532 122233233 44444444444 4666788898888775431
Q ss_pred C--------cceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 242 K--------APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 242 ~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
. .....+.. ...|..+...+++ ..++..+..|.++...+..
T Consensus 148 p~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~-~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 148 PPSTPGARGVQGIKLEK-NDETSGLRIWNGE-PYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CBCCTTCCCEECCCCCT-TCCEEEEEEESSC-SEEEEEETTSCEEEEEGGG
T ss_pred CCcCCCCCCEEEEccCC-CCEEEEEEEeCCC-CEEEEEeCCCcEEEeEHHH
Confidence 1 11112222 2445555444445 6788889999988887764
No 359
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=63.71 E-value=67 Score=27.13 Aligned_cols=167 Identities=8% Similarity=0.103 Sum_probs=86.9
Q ss_pred eEEEEEcccccCCCCCCcc--eeeeeeecc------ccceeEEEec---CC---CCCcEEEE-ecCCcEEEEEcCCCCCC
Q 018697 92 GAAIWQIPELYGQLNSPQL--ERIAALDAH------VGKINCVLWW---SS---GRHDKLVS-IDEENIFLWSLDCSNKN 156 (351)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~--~~~~~~~~h------~~~v~~~~~~---~~---~~~~~~~~-~~d~~v~iwd~~~~~~~ 156 (351)
+|.+||+. +. +.++++.-. ......+.+. |. +...+..+ +...-|.|+|+.++...
T Consensus 124 kLv~~DL~---------t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw 194 (381)
T 3q6k_A 124 AIVAYDLK---------QPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW 194 (381)
T ss_dssp EEEEEESS---------STTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEECC---------CCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE
Confidence 46677776 33 455544322 3456777776 22 12223444 56788999999875432
Q ss_pred ccccccc-cc---------Cc----ccceeeeEECCC----CCcEEEeecCCeEEEEEcc-----cCCcCceee----cc
Q 018697 157 AQVQSKQ-SS---------GM----LHYLSGGAWDPH----DVNAVAATCESSVQFWDLR-----SMGKTNSIE----HA 209 (351)
Q Consensus 157 ~~~~~~~-~~---------~~----~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~~-----~~~~~~~~~----~~ 209 (351)
. +.... .. +. ...+..++.+|+ ++.|+...-.+ -++|.+. .......++ .+
T Consensus 195 R-v~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg 272 (381)
T 3q6k_A 195 N-VTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRG 272 (381)
T ss_dssp E-EECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECC
T ss_pred E-EccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecC
Confidence 2 22111 00 10 136788899987 66666654333 2334333 222111111 11
Q ss_pred ---eeEEEEcC-CCCCcEEEEecCCCeEEEEeccc-CC--cceeEee--CCCCceeEEEecCCCCCeEEEe
Q 018697 210 ---HVRNVDYD-TKKKHLLVTAADESGIHLWDLRM-LK--APIQELP--GHTHWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 210 ---~v~~~~~~-~~~~~~l~~~~~dg~i~i~d~~~-~~--~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~ 271 (351)
+-..+++. .+|. ++++--+...|..|+... .- .....+. ..-..+..+.+.++| .+.+..
T Consensus 273 ~~s~~~~~~~D~~~G~-ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g-~Lwv~s 341 (381)
T 3q6k_A 273 KYNDAIALAYDPKTKV-IFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKG-GLWFMS 341 (381)
T ss_dssp TTCCEEEEEECTTTCE-EEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTS-CEEEEE
T ss_pred CCCCcceEEEeCCCCe-EEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCC-eEEEEE
Confidence 13345675 5665 777777889999999864 11 1122222 122356777777666 444443
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=55.60 E-value=85 Score=25.77 Aligned_cols=161 Identities=6% Similarity=-0.045 Sum_probs=83.9
Q ss_pred ccceeEEEecC---CCCCcEEEEecCCcEEEEEcCCCCCCcc--cccccccCcccceeeeEECCCCCcEEEeecCCeEEE
Q 018697 120 VGKINCVLWWS---SGRHDKLVSIDEENIFLWSLDCSNKNAQ--VQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQF 194 (351)
Q Consensus 120 ~~~v~~~~~~~---~~~~~~~~~~~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 194 (351)
...|..+...+ +.. .++..+.+|.++--.+........ ........ ...+..+........++..+..|.+..
T Consensus 94 ~e~i~~~~~~~~~~~e~-~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAP-YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIR 171 (327)
T ss_dssp TCCEEEEEEESSTTSSS-EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeccCCCCC-EEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEE
Confidence 34455543333 344 366667899999988764222111 10011111 124444444445567888888998888
Q ss_pred EEcc--cCC---------cCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCC------cceeEee--CCCCc
Q 018697 195 WDLR--SMG---------KTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK------APIQELP--GHTHW 254 (351)
Q Consensus 195 wd~~--~~~---------~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~--~~~~~ 254 (351)
+... .-. ....+..+. |..+...+.+. .++..+..|.++.-.+.... +-+..+. .....
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~ 250 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGT-YLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGR 250 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTC-EEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCS
T ss_pred EECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCC-EEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCe
Confidence 8766 211 112222223 55554444454 57778899999888765422 1111221 11233
Q ss_pred eeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 255 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
+..+...... ..++..+.+|.+.-++...
T Consensus 251 lv~~~~~~~~-~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 251 LVGALIVDDD-SELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEEEECTT-CEEEEEEGGGCEEEEEGGG
T ss_pred EEEEEEeCCC-ccEEEEcCCCeEEEEehhh
Confidence 4444433333 4556667777776676654
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.13 E-value=45 Score=30.11 Aligned_cols=29 Identities=14% Similarity=0.219 Sum_probs=19.2
Q ss_pred cccceeecc-ccceEEEEEeCCCCCceEEE
Q 018697 304 NSLLNSYSD-YEDSVYGLAWSSREPWIFAS 332 (351)
Q Consensus 304 ~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s 332 (351)
++....+.. ....++.++|+||++.+++.
T Consensus 519 g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 519 GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 444333333 34679999999999866555
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=52.94 E-value=9 Score=37.91 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=30.3
Q ss_pred ceeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee
Q 018697 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE 207 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 207 (351)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667778899999999999999999987665543
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=49.35 E-value=72 Score=28.69 Aligned_cols=61 Identities=10% Similarity=0.083 Sum_probs=36.7
Q ss_pred ceeEEEecCCCCCeEE-EeeC-----------CCeEEEEEcCCCCCCCCCCcccccCCcccccccceeecc-ccceEEEE
Q 018697 254 WTWAVCCNPEYDGFIL-SAGT-----------DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD-YEDSVYGL 320 (351)
Q Consensus 254 ~v~~~~~~~~~~~~l~-s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~ 320 (351)
....|.|+++| .+.+ +-.. ...+..++... ++....+.. ....++.+
T Consensus 477 sPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-------------------Gel~~fl~~P~~aEpnGi 536 (592)
T 4a9v_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPAT-------------------GEIRRFMVGPIGCEVTGI 536 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTT-------------------CCEEEEEECCTTCEEEEE
T ss_pred CCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCC-------------------CeEEEEEeCCCCccccCC
Confidence 45678899998 5555 4321 11444455544 444433432 23568999
Q ss_pred EeCCCCCceEEEee
Q 018697 321 AWSSREPWIFASLS 334 (351)
Q Consensus 321 ~~~~~~~~~l~s~~ 334 (351)
+|+||++.++++.-
T Consensus 537 afSPD~ktLfV~vQ 550 (592)
T 4a9v_A 537 SFSPDQKTLFVGIQ 550 (592)
T ss_dssp EECTTSSEEEEEEE
T ss_pred EECCCCCEEEEEEe
Confidence 99999996666553
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=43.94 E-value=55 Score=29.57 Aligned_cols=57 Identities=12% Similarity=0.089 Sum_probs=34.9
Q ss_pred ceeeeEECCCCCcEEEeecC------------CeEEEEEcccCCcCceeecce---eEEEEcCCCCCcEEEE
Q 018697 170 YLSGGAWDPHDVNAVAATCE------------SSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVT 226 (351)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~ 226 (351)
..-.|+|+|.|.+++.-..+ +.+.+.+..+++...-+.... ++.++|+||++.+++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34568999999855554321 245555666665443333211 9999999999855543
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.93 E-value=25 Score=32.46 Aligned_cols=35 Identities=20% Similarity=0.397 Sum_probs=26.6
Q ss_pred eeeeEECCCCCcEEEeecCCeEEEEEcccCCcCceee
Q 018697 171 LSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE 207 (351)
Q Consensus 171 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 207 (351)
|.++.+ +..++++-+.|.++|+|++++++++....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444444 46789999999999999999987655443
No 366
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=42.05 E-value=2.2e+02 Score=26.69 Aligned_cols=151 Identities=12% Similarity=0.089 Sum_probs=74.4
Q ss_pred ccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccccc-C--cccceeeeEECCCC-CcEEEeecCCe----
Q 018697 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS-G--MLHYLSGGAWDPHD-VNAVAATCESS---- 191 (351)
Q Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-~--~~~~v~~~~~~~~~-~~l~~~~~d~~---- 191 (351)
...|.+|+++|.....++++...+.|...+ .+............ . ....+.+++++|.. ..++++..+..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~--DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD--AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE--TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec--CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 458999999998766677776666655443 22332222211100 0 12368899998853 34555443211
Q ss_pred EEEEEc-ccCCcCceee---------cc--eeEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC------CCC
Q 018697 192 VQFWDL-RSMGKTNSIE---------HA--HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG------HTH 253 (351)
Q Consensus 192 i~iwd~-~~~~~~~~~~---------~~--~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~ 253 (351)
-.||-. ..++.-..+. .. .+..++++|.....++.+...+. ||-....++.-..+.. ...
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCC
Confidence 223322 2222111110 01 14567777765445666664443 3333332332222221 124
Q ss_pred ceeEEEecCCCCCeEEEeeCC
Q 018697 254 WTWAVCCNPEYDGFILSAGTD 274 (351)
Q Consensus 254 ~v~~~~~~~~~~~~l~s~~~d 274 (351)
.+..+.++|..+..++.+..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 578889988654566666554
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.94 E-value=1.5e+02 Score=26.76 Aligned_cols=58 Identities=12% Similarity=0.133 Sum_probs=36.4
Q ss_pred eEEEEcCCCCCcEEE-EecC-----------CCeEEEEecccCCcceeEeeC-CCCceeEEEecCCCCCeEEEe
Q 018697 211 VRNVDYDTKKKHLLV-TAAD-----------ESGIHLWDLRMLKAPIQELPG-HTHWTWAVCCNPEYDGFILSA 271 (351)
Q Consensus 211 v~~~~~~~~~~~~l~-~~~~-----------dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~ 271 (351)
...|+|.++|. +.+ +-.. ...+..++..+ ++....+.. ....++.++|+||+ +.|+.+
T Consensus 478 PDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-Gel~~fl~~P~~aEpnGiafSPD~-ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQ-KTLFVG 548 (592)
T ss_dssp EEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTS-SEEEEE
T ss_pred CCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCC-CeEEEEEeCCCCccccCCEECCCC-CEEEEE
Confidence 78899999998 554 3221 12566666654 443333333 23568999999999 665554
No 368
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=41.87 E-value=2.5e+02 Score=27.16 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=29.3
Q ss_pred eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEee
Q 018697 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249 (351)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (351)
+.+++..++.. ++++-+.|+++|+|++.+ ++++.+..
T Consensus 238 ~~~~~~~~~~~-~lftl~~D~~LRiWsl~t-~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYN-VLVMLSLDYKLKVLDLST-NQCVETIE 274 (950)
T ss_dssp EEEEEEETTTT-EEEEEETTCEEEEEETTT-TEEEEEEE
T ss_pred EEEEeecCCCc-EEEEEECCCEEEEEECCC-CCeEeeec
Confidence 66777777776 788899999999999997 66666543
No 369
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=41.84 E-value=1.5e+02 Score=24.68 Aligned_cols=154 Identities=8% Similarity=-0.016 Sum_probs=70.2
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccc-cC--------cccceeeeEECCCC-CcEEEeecCC
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS-SG--------MLHYLSGGAWDPHD-VNAVAATCES 190 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~~--------~~~~v~~~~~~~~~-~~l~~~~~d~ 190 (351)
..+.+|.+.|.....+.++..++.|. ....+........... .. ....+.++.++|.. ..++++...
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~--~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~- 253 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVF--ESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC- 253 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEE--EESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEE--EECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC-
Confidence 46788999885332245554344433 3333333222221100 00 01247888998863 456665544
Q ss_pred eEEEEEcccCC---cCce-eecc--e-eEEEEcCCCCCcEEEEecC-----------CCeEEEEecccCCcceeEee-CC
Q 018697 191 SVQFWDLRSMG---KTNS-IEHA--H-VRNVDYDTKKKHLLVTAAD-----------ESGIHLWDLRMLKAPIQELP-GH 251 (351)
Q Consensus 191 ~i~iwd~~~~~---~~~~-~~~~--~-v~~~~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~-~~ 251 (351)
.|...+- .++ .+.. +... . +.+++++|.....+..+.. ++...+|.....++....+. +-
T Consensus 254 gl~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~gl 332 (394)
T 3b7f_A 254 GIYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGL 332 (394)
T ss_dssp EEEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTS
T ss_pred eEEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCC
Confidence 3444331 121 1111 1110 2 5678887643323444421 33345665554333333332 10
Q ss_pred CC-------ceeEEEecCCCCCeEEEeeCCCeEE
Q 018697 252 TH-------WTWAVCCNPEYDGFILSAGTDSTVN 278 (351)
Q Consensus 252 ~~-------~v~~~~~~~~~~~~l~s~~~dg~i~ 278 (351)
.. ....++++|..+..|+.++.++.|.
T Consensus 333 p~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 333 PTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp CCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred CCccccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 10 1135778876535566666555543
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=41.10 E-value=21 Score=35.26 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=25.0
Q ss_pred ceeEEEecCCCCCeEEEeeCCCeEEEEEcCCC
Q 018697 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTS 285 (351)
Q Consensus 254 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 285 (351)
.+.+++..++. .++++-+.|+++|+|++.++
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCC
Confidence 34455566666 89999999999999999886
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=38.52 E-value=1.5e+02 Score=23.57 Aligned_cols=160 Identities=9% Similarity=-0.025 Sum_probs=84.5
Q ss_pred ccceeEEEecC-CCCCcEEEEecCCcEEEEEcCCCCCCc-ccccccccCcccceeeeEECCCCCcEEEeecCCeEEEEEc
Q 018697 120 VGKINCVLWWS-SGRHDKLVSIDEENIFLWSLDCSNKNA-QVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDL 197 (351)
Q Consensus 120 ~~~v~~~~~~~-~~~~~~~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 197 (351)
...|..+.... +.. .++..+.+|.++-..+....... -........ ...+..+........++..+..|.+..+..
T Consensus 67 ~e~i~~v~~~~~~~~-~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFIREKFGN-RLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEEGGGSCS-EEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEECCcCCCC-EEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 45566654321 334 36666889999999887532000 000000111 124555555555667888899999888876
Q ss_pred ccCC---------cCceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecccCC------cceeEeeCCCCceeEEEec
Q 018697 198 RSMG---------KTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK------APIQELPGHTHWTWAVCCN 261 (351)
Q Consensus 198 ~~~~---------~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~ 261 (351)
..-. ....+..++ +..+...+++. .++..++.|.++...+.... +-+..+ ...+.+..+...
T Consensus 145 ~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~-~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~ 222 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLEKNDETSGLRIWNGEP-YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI 222 (276)
T ss_dssp GGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCS-EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE
T ss_pred hhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCC-EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe
Confidence 4321 112233333 44443334444 56678888998888765421 112222 223344444333
Q ss_pred CCCCCeEEEeeCCCeEEE--EEcCC
Q 018697 262 PEYDGFILSAGTDSTVNL--WLVST 284 (351)
Q Consensus 262 ~~~~~~l~s~~~dg~i~i--wd~~~ 284 (351)
... ..++..+.+|.+.. ++...
T Consensus 223 ~~~-~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 223 KEE-VELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp SSE-EEEEEEETTSCEEEEEEEGGG
T ss_pred CCC-CEEEEEcCCCeEEEeeeCHHH
Confidence 333 45666677777776 76654
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=36.96 E-value=1.7e+02 Score=23.92 Aligned_cols=103 Identities=9% Similarity=-0.006 Sum_probs=61.4
Q ss_pred CCCcEEEeecCCeEEEEEcccCCc-------Cceeecce-eEEEEcCCCCCcEEEEecCCCeEEEEecc--c---CCc--
Q 018697 179 HDVNAVAATCESSVQFWDLRSMGK-------TNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLR--M---LKA-- 243 (351)
Q Consensus 179 ~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~--~---~~~-- 243 (351)
+..+++..+.+|.++.-.+..-.. ...+..+. +..+....... .++..+..|.+..+... . .++
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d-~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGD-DLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTC-EEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCC-EEEEEECCCeEEEEECcccccCcCCcCC
Confidence 477899999999999988765322 12222223 33333333334 45557778888777665 2 111
Q ss_pred ---ceeEeeCCCCceeEEEecCCCCCeEEEeeCCCeEEEEEcCC
Q 018697 244 ---PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (351)
Q Consensus 244 ---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 284 (351)
....+. ....|.++...+.+ .+++..+..|.++.-.+..
T Consensus 187 ~Gv~~i~L~-~~d~Vv~~~~~~~~-~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 187 SGVQGMRFN-IDDRLLSLNVVREG-TYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp BCEESSCCC-TTCCEEEEEECCTT-CEEEEEETTSEEEEEEGGG
T ss_pred CCeeeecCC-CCCEEEEEEEECCC-CEEEEEeCCCcEEEEEHHH
Confidence 111222 23456666555555 6888899999998887654
No 373
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=36.00 E-value=2.7e+02 Score=25.84 Aligned_cols=93 Identities=9% Similarity=0.129 Sum_probs=54.5
Q ss_pred cCCeEEEEEcccCC-------cCce-eecce---eEEEEcCCCCCcEEEEecCCCe--EEEEecccCCc-ceeE-eeCC-
Q 018697 188 CESSVQFWDLRSMG-------KTNS-IEHAH---VRNVDYDTKKKHLLVTAADESG--IHLWDLRMLKA-PIQE-LPGH- 251 (351)
Q Consensus 188 ~d~~i~iwd~~~~~-------~~~~-~~~~~---v~~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~-~~~~-~~~~- 251 (351)
..+.|...|+.++. .... +.... +..+.+..+. ++++...++. +.++|+.. +. .... +...
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--l~~~~~~~~~~~l~~~~~~~-g~~~~~~~i~lp~ 394 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR--VFLATYDNVVAKVVTFTLEN-EQWTKPVVLKLPY 394 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC--EEEEEEETTEEEEEEECEET-TEECCCEEECCCS
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE--EEEEEEECCEEEEEEEECCC-CceEEEeccCCCC
Confidence 36789999988742 1222 22211 8889998763 7777777764 66777654 32 2233 2211
Q ss_pred CCceeEEEecCCCCCeEEEeeC---CCeEEEEEcC
Q 018697 252 THWTWAVCCNPEYDGFILSAGT---DSTVNLWLVS 283 (351)
Q Consensus 252 ~~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~ 283 (351)
...+.....++++..++++.+. -+.+..+|+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 395 QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 2456666777777566665543 3456666664
No 374
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=35.63 E-value=51 Score=30.53 Aligned_cols=31 Identities=3% Similarity=0.161 Sum_probs=24.1
Q ss_pred CceeEEEecCCCCCeEEEeeCCCeEEEEEcCCCC
Q 018697 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSN 286 (351)
Q Consensus 253 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 286 (351)
..|.++.+. . .++++-+.|.++|+|++.++.
T Consensus 222 ~~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 222 SVISCKLFH--E-RYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp CEEEEEEET--T-TEEEEEETTCEEEEEETTTTE
T ss_pred ceEEEeccC--C-cEEEEEEcCCeEEEEEcCCCc
Confidence 345555543 4 799999999999999999853
No 375
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=34.82 E-value=2.8e+02 Score=25.73 Aligned_cols=107 Identities=8% Similarity=-0.007 Sum_probs=55.2
Q ss_pred cceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCccccccccc--C-cccceeeeEECCCC-CcEEEeecC-------
Q 018697 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS--G-MLHYLSGGAWDPHD-VNAVAATCE------- 189 (351)
Q Consensus 121 ~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~-~~l~~~~~d------- 189 (351)
+.|..|+++|.....++++...+.|...+ ........+..... . ....+.+++++|.. +.++++...
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~--D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~ 100 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWD--PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLP 100 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEE--TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeC--CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccccc
Confidence 37999999998765577766556554443 33333222211100 0 11368899999843 455555421
Q ss_pred CeEEEEEcc-cCCcCceeec---------c-e-eEEEEcCCCCCcEEEEecC
Q 018697 190 SSVQFWDLR-SMGKTNSIEH---------A-H-VRNVDYDTKKKHLLVTAAD 229 (351)
Q Consensus 190 ~~i~iwd~~-~~~~~~~~~~---------~-~-v~~~~~~~~~~~~l~~~~~ 229 (351)
+...||... .++.-..+.. + + +..++++|.....++.+..
T Consensus 101 ~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 101 NMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred CCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 123444433 2322111110 1 1 4678898876546666663
No 376
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=28.42 E-value=3.6e+02 Score=25.00 Aligned_cols=112 Identities=6% Similarity=-0.118 Sum_probs=56.0
Q ss_pred cceeeeeeCCCCCceEEEEeecCCcceEEEEEcccccCCCCCCcceeeeeeec----cccceeEEEecCCCCCcEEEEec
Q 018697 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA----HVGKINCVLWWSSGRHDKLVSID 141 (351)
Q Consensus 66 ~~v~~i~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~~~~~~~ 141 (351)
+.|..|+++|.+..++.+. ...+. ||..... ..+++.+..... ....|.+|++.|.....++++..
T Consensus 23 g~i~~i~~~p~~~~~~~~~---~~~gg--v~rS~D~-----G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~ 92 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYAR---AAIGG--AYRWDPS-----TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAG 92 (737)
T ss_dssp SCCCEEEECSSSTTCEEEE---CSSSC--EEEEETT-----TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEEC
T ss_pred ceeeEEEECCCCCCEEEEE---ecCCc--EEEeCCC-----CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEec
Confidence 3899999999764433332 33444 4443310 113333221111 12468999999965433555432
Q ss_pred C-------CcEEEEEcCCCCCCccccccccc--Cc---ccceeeeEECCCC-CcEEEee
Q 018697 142 E-------ENIFLWSLDCSNKNAQVQSKQSS--GM---LHYLSGGAWDPHD-VNAVAAT 187 (351)
Q Consensus 142 d-------~~v~iwd~~~~~~~~~~~~~~~~--~~---~~~v~~~~~~~~~-~~l~~~~ 187 (351)
. +...||.-..+.+..+....... +. ...+..++++|.. ..++++.
T Consensus 93 ~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 93 MYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp SCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 1 13566766655554443322110 00 1134678898865 4555555
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=27.31 E-value=2.1e+02 Score=25.17 Aligned_cols=56 Identities=9% Similarity=-0.012 Sum_probs=36.5
Q ss_pred EEEEecCCCeEEEEecccCC-------cceeEeeC--CCCceeEEEecCCCCCeEEEeeCCCeEEE
Q 018697 223 LLVTAADESGIHLWDLRMLK-------APIQELPG--HTHWTWAVCCNPEYDGFILSAGTDSTVNL 279 (351)
Q Consensus 223 ~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~i 279 (351)
++..|+.+|.|.-.-+.... ..+.++.. ...+|..|.++++. .+|+.++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~-~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQ-QQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTT-TEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCC-CEEEEEECCeEEEE
Confidence 56678888876544332111 12334432 35789999999998 89999988876554
No 378
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=23.10 E-value=4.6e+02 Score=24.43 Aligned_cols=153 Identities=11% Similarity=0.025 Sum_probs=75.3
Q ss_pred cccceeEEEecCCCCCcEEEEecCCcEEEEEcCCCCCCcccccccc-----c-C--cccceeeeEECCC-CCcEEEeecC
Q 018697 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS-----S-G--MLHYLSGGAWDPH-DVNAVAATCE 189 (351)
Q Consensus 119 h~~~v~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----~-~--~~~~v~~~~~~~~-~~~l~~~~~d 189 (351)
-.+.|.+|.++|.+..+++++...+.|. ....+.+......... . . ....+.+++++|. .+.++++..+
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~--~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTY--RWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEE--EEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECS
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEE--EECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecc
Confidence 4568999999999876677776556544 3333333222221100 0 0 1235888999884 3445554321
Q ss_pred -----CeEEEEEc-ccCCcCceeec---------ce--eEEEEcCCCCCcEEEEecCCCeEEEEecccCCcceeEeeC--
Q 018697 190 -----SSVQFWDL-RSMGKTNSIEH---------AH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG-- 250 (351)
Q Consensus 190 -----~~i~iwd~-~~~~~~~~~~~---------~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-- 250 (351)
....||-- ..++.-..+.. +. ...++++|.....++.+...+.| |-....++.-..+..
T Consensus 97 ~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l--~~S~DgG~TW~~~~~~~ 174 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGL--WRSTDRAQTWSRMNQLP 174 (763)
T ss_dssp CTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCE--EEESSTTSSCEECTTSC
T ss_pred cccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcE--EEECCCCcCccccccCc
Confidence 11333332 33332211110 11 24678887654345555554433 333322332222221
Q ss_pred ----CCCceeEEEecCCCCCeEEEeeCCC
Q 018697 251 ----HTHWTWAVCCNPEYDGFILSAGTDS 275 (351)
Q Consensus 251 ----~~~~v~~~~~~~~~~~~l~s~~~dg 275 (351)
....+..|.++|..+..++.+..++
T Consensus 175 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 175 DSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred ccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1134778899887645566665554
No 379
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=21.36 E-value=3.6e+02 Score=22.46 Aligned_cols=197 Identities=13% Similarity=0.096 Sum_probs=0.0
Q ss_pred CCCcEEEEecCCcEEEEEcCCCCCCc-------ccccccccCcccceeeeEECCCCCcEEEeecCCeEEEE---------
Q 018697 132 GRHDKLVSIDEENIFLWSLDCSNKNA-------QVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFW--------- 195 (351)
Q Consensus 132 ~~~~~~~~~~d~~v~iwd~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw--------- 195 (351)
+....++-..||.|+.|-.+...+.. ........-....+..++.+.-....++-..+|.|+.|
T Consensus 61 G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 61 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCC
Q ss_pred -----EcccCCcCceeecceeEEEEcCCCCCcEEEEecCCCeEEEEecccCCc-----------ceeEeeCCCCceeEEE
Q 018697 196 -----DLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA-----------PIQELPGHTHWTWAVC 259 (351)
Q Consensus 196 -----d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~v~~~~ 259 (351)
+......+..+....|..++.... ..+.-..+|.|+.|-....++ |...-......|..++
T Consensus 141 ~g~~~~~~~p~~v~~l~~~~i~~va~G~~---hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia 217 (389)
T 3kci_A 141 HGNRSPCDRPRVIESLRGIEVVDVAAGGA---HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 217 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEECSS---EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE
T ss_pred CCCCccCcCCeEecccCCCeEEEEEeCcC---eEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEE
Q ss_pred ecCCCCCeEEEeeCCCeEEEEEcCCCCCCCCCCcccccCCcccccccceeeccccceEEEEEeCCCCCceEEEeeeCCeE
Q 018697 260 CNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRV 339 (351)
Q Consensus 260 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v 339 (351)
..... .+.+....||.|..|-... ..............+...-......|..++.... ..+.-..||.|
T Consensus 218 ~G~g~-~~t~~l~~~G~v~~wG~n~-------~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~---hs~alt~~G~v 286 (389)
T 3kci_A 218 CGSGD-AQTLCLTDDDTVWSWGDGD-------YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ---FSVALTKSGAV 286 (389)
T ss_dssp ECCSS-CEEEEEETTTEEEEEECCG-------GGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT---EEEEEETTSCE
T ss_pred EcCCC-cEEEEEccCCEEEEEeCCC-------CCCCCCCCCCCccccEEecccCCCcEEEEeCCCC---EEEEEeCCCeE
Q ss_pred EEe
Q 018697 340 VVE 342 (351)
Q Consensus 340 ~vw 342 (351)
+.|
T Consensus 287 ~~w 289 (389)
T 3kci_A 287 YTW 289 (389)
T ss_dssp EEE
T ss_pred EEE
No 380
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=20.48 E-value=2.5e+02 Score=25.01 Aligned_cols=56 Identities=0% Similarity=-0.053 Sum_probs=36.9
Q ss_pred EEEEecCCCeEEEEecccCCc---ceeEee--CCCCcee-EEEecCCCCCeEEEeeCCCeEEE
Q 018697 223 LLVTAADESGIHLWDLRMLKA---PIQELP--GHTHWTW-AVCCNPEYDGFILSAGTDSTVNL 279 (351)
Q Consensus 223 ~l~~~~~dg~i~i~d~~~~~~---~~~~~~--~~~~~v~-~~~~~~~~~~~l~s~~~dg~i~i 279 (351)
++..|+.+|.|.-.-+..... .+.++. ....+|. .|.+++++ .+|+.++.++.++|
T Consensus 415 V~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~-~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 415 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQ-LYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTS-SEEEEECSSEEEEE
T ss_pred EEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCC-CeEEEEecccccee
Confidence 566788999877665543221 233333 2346785 89999988 88888887765554
Done!