Query 018698
Match_columns 351
No_of_seqs 213 out of 639
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:41:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018698.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018698hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bay_A PRE-mRNA splicing facto 98.9 3.5E-10 1.2E-14 82.9 3.6 55 290-350 3-58 (61)
2 2kr4_A Ubiquitin conjugation f 98.8 3.7E-09 1.3E-13 82.3 4.2 55 288-348 12-66 (85)
3 2f42_A STIP1 homology and U-bo 98.7 8E-09 2.7E-13 91.5 4.9 55 289-348 105-159 (179)
4 2yu4_A E3 SUMO-protein ligase 98.7 1E-08 3.4E-13 81.3 4.5 57 288-347 5-68 (94)
5 2kre_A Ubiquitin conjugation f 98.7 7.5E-09 2.6E-13 83.2 3.2 56 287-348 26-81 (100)
6 1wgm_A Ubiquitin conjugation f 98.6 1.4E-08 4.8E-13 81.3 3.7 55 288-348 20-75 (98)
7 1t1h_A Gspef-atpub14, armadill 98.6 5.9E-08 2E-12 73.5 4.9 56 288-348 6-61 (78)
8 2ct2_A Tripartite motif protei 98.5 1.1E-07 3.8E-12 73.3 5.0 62 287-348 12-74 (88)
9 2c2l_A CHIP, carboxy terminus 98.4 1.3E-07 4.5E-12 87.6 3.5 54 289-347 207-260 (281)
10 2xeu_A Ring finger protein 4; 98.4 1.6E-07 5.3E-12 68.0 2.7 56 292-350 5-64 (64)
11 2ysl_A Tripartite motif-contai 98.3 2.8E-07 9.7E-12 68.6 3.5 56 288-346 18-73 (73)
12 3ng2_A RNF4, snurf, ring finge 98.3 2.4E-07 8.3E-12 68.5 2.7 45 303-350 27-71 (71)
13 2ecw_A Tripartite motif-contai 98.2 1.2E-06 4E-11 66.7 5.4 60 288-350 17-79 (85)
14 2ecv_A Tripartite motif-contai 98.2 8.4E-07 2.9E-11 67.5 3.9 59 288-349 17-78 (85)
15 1g25_A CDK-activating kinase a 98.2 1.2E-06 4.1E-11 63.9 4.4 58 291-350 4-63 (65)
16 2egp_A Tripartite motif-contai 98.2 4.3E-07 1.5E-11 68.6 1.4 60 287-349 9-72 (79)
17 1jm7_A BRCA1, breast cancer ty 98.2 9.8E-07 3.4E-11 71.0 3.4 56 290-348 21-76 (112)
18 2ecy_A TNF receptor-associated 98.1 2.8E-06 9.6E-11 62.1 5.1 54 287-345 12-65 (66)
19 2ysj_A Tripartite motif-contai 98.1 3E-06 1E-10 61.3 5.0 47 287-336 17-63 (63)
20 3ztg_A E3 ubiquitin-protein li 98.1 3.1E-06 1E-10 65.9 5.3 55 288-346 11-67 (92)
21 3htk_C E3 SUMO-protein ligase 98.1 1.2E-06 4.1E-11 81.6 3.1 57 287-347 178-237 (267)
22 4ap4_A E3 ubiquitin ligase RNF 98.0 3.6E-06 1.2E-10 69.2 4.3 82 264-350 48-133 (133)
23 3lrq_A E3 ubiquitin-protein li 97.9 7.3E-06 2.5E-10 65.2 4.4 57 289-350 21-78 (100)
24 3fl2_A E3 ubiquitin-protein li 97.9 6.6E-06 2.3E-10 67.8 4.3 47 291-342 53-99 (124)
25 2yur_A Retinoblastoma-binding 97.9 5.5E-06 1.9E-10 62.1 3.3 53 288-344 13-66 (74)
26 2ecm_A Ring finger and CHY zin 97.9 8.4E-06 2.9E-10 57.0 3.3 48 291-341 6-54 (55)
27 2djb_A Polycomb group ring fin 97.9 1.2E-05 4E-10 59.8 4.2 54 288-347 13-67 (72)
28 3hct_A TNF receptor-associated 97.8 1.8E-05 6.1E-10 64.7 5.0 59 284-347 12-70 (118)
29 2ecj_A Tripartite motif-contai 97.8 1.5E-05 5.1E-10 56.3 3.7 46 288-336 13-58 (58)
30 2csy_A Zinc finger protein 183 97.8 1.6E-05 5.4E-10 60.4 3.9 47 289-341 14-60 (81)
31 2kiz_A E3 ubiquitin-protein li 97.8 4.8E-05 1.6E-09 55.8 6.2 52 289-343 13-64 (69)
32 2y43_A E3 ubiquitin-protein li 97.8 1.8E-05 6.2E-10 62.4 4.1 54 289-348 21-75 (99)
33 1z6u_A NP95-like ring finger p 97.8 1.8E-05 6.1E-10 67.8 4.3 48 291-343 79-126 (150)
34 4ayc_A E3 ubiquitin-protein li 97.7 1.8E-05 6E-10 66.6 3.8 44 293-342 56-99 (138)
35 2d8t_A Dactylidin, ring finger 97.7 7E-06 2.4E-10 60.9 0.8 52 290-347 15-66 (71)
36 2ect_A Ring finger protein 126 97.7 1.4E-05 4.9E-10 60.1 2.5 57 287-346 12-68 (78)
37 1rmd_A RAG1; V(D)J recombinati 97.7 2.7E-05 9.4E-10 63.2 4.0 55 288-347 21-75 (116)
38 2ckl_A Polycomb group ring fin 97.6 3.7E-05 1.3E-09 61.7 4.0 49 289-343 14-63 (108)
39 2l0b_A E3 ubiquitin-protein li 97.6 5.1E-05 1.7E-09 59.1 3.9 51 289-342 39-89 (91)
40 4ap4_A E3 ubiquitin ligase RNF 97.6 3.5E-05 1.2E-09 63.2 3.0 58 290-350 7-68 (133)
41 2ckl_B Ubiquitin ligase protei 97.5 5.9E-05 2E-09 65.1 4.6 52 287-343 51-103 (165)
42 2ea6_A Ring finger protein 4; 97.5 5.5E-05 1.9E-09 55.1 3.4 49 291-342 16-68 (69)
43 3l11_A E3 ubiquitin-protein li 97.5 2.3E-05 7.8E-10 63.5 1.0 50 288-342 13-62 (115)
44 1iym_A EL5; ring-H2 finger, ub 97.4 5.1E-05 1.7E-09 53.0 2.3 49 290-341 5-54 (55)
45 1x4j_A Ring finger protein 38; 97.4 6.3E-05 2.2E-09 56.2 2.9 53 288-343 21-73 (75)
46 2ep4_A Ring finger protein 24; 97.4 0.00015 5.1E-09 53.8 4.5 49 291-342 16-64 (74)
47 3hcs_A TNF receptor-associated 97.4 8.3E-05 2.8E-09 64.4 3.4 58 285-347 13-70 (170)
48 1chc_A Equine herpes virus-1 r 97.4 9.1E-05 3.1E-09 54.0 3.0 45 292-341 7-51 (68)
49 1jm7_B BARD1, BRCA1-associated 97.4 1.6E-05 5.4E-10 64.9 -1.4 51 289-347 21-72 (117)
50 4ic3_A E3 ubiquitin-protein li 97.3 7E-05 2.4E-09 56.2 2.0 49 291-351 25-74 (74)
51 2ecg_A Baculoviral IAP repeat- 97.3 0.00012 4.2E-09 54.9 2.6 49 291-351 26-75 (75)
52 1bor_A Transcription factor PM 97.2 4.6E-05 1.6E-09 54.0 -0.6 46 290-344 6-51 (56)
53 2ecn_A Ring finger protein 141 97.1 7.5E-05 2.6E-09 54.8 -0.0 52 289-347 14-65 (70)
54 2ecl_A Ring-box protein 2; RNF 97.1 0.00022 7.7E-09 54.3 2.3 51 293-346 29-80 (81)
55 1v87_A Deltex protein 2; ring- 97.0 0.00053 1.8E-08 55.1 4.6 36 308-343 58-95 (114)
56 1e4u_A Transcriptional repress 97.0 0.00065 2.2E-08 51.6 4.5 54 290-346 11-66 (78)
57 3m62_A Ubiquitin conjugation f 97.0 0.0004 1.4E-08 74.9 4.3 53 289-347 890-943 (968)
58 3knv_A TNF receptor-associated 96.9 0.00017 5.7E-09 61.1 0.5 52 286-342 27-78 (141)
59 2vje_B MDM4 protein; proto-onc 96.8 0.00092 3.1E-08 48.5 3.8 41 306-351 20-63 (63)
60 2vje_A E3 ubiquitin-protein li 96.7 0.0015 5.3E-08 47.4 4.0 41 306-351 21-64 (64)
61 2y1n_A E3 ubiquitin-protein li 96.6 0.00091 3.1E-08 65.6 3.3 52 291-347 333-384 (389)
62 3dpl_R Ring-box protein 1; ubi 96.4 0.0019 6.4E-08 52.0 3.2 42 301-345 63-104 (106)
63 1wim_A KIAA0161 protein; ring 96.3 0.00059 2E-08 53.2 0.0 58 290-347 5-71 (94)
64 2yho_A E3 ubiquitin-protein li 96.0 0.0025 8.5E-08 48.4 1.8 37 305-350 30-67 (79)
65 2d8s_A Cellular modulator of i 95.9 0.0042 1.4E-07 47.4 3.0 52 292-345 17-73 (80)
66 3t6p_A Baculoviral IAP repeat- 95.8 0.0017 5.8E-08 62.8 0.2 49 291-351 296-345 (345)
67 4a0k_B E3 ubiquitin-protein li 95.1 0.0037 1.3E-07 51.2 0.0 40 303-345 76-115 (117)
68 2ea5_A Cell growth regulator w 94.7 0.015 5.1E-07 42.7 2.4 38 304-350 26-64 (68)
69 3i2d_A E3 SUMO-protein ligase 93.5 0.06 2E-06 52.3 4.5 52 291-346 250-304 (371)
70 4fo9_A E3 SUMO-protein ligase 92.4 0.11 3.7E-06 50.3 4.5 53 290-346 215-270 (360)
71 2k5c_A Uncharacterized protein 91.7 0.0079 2.7E-07 45.8 -3.4 63 285-349 3-75 (95)
72 3vk6_A E3 ubiquitin-protein li 89.3 0.27 9.2E-06 38.9 3.4 35 306-342 15-49 (101)
73 1vyx_A ORF K3, K3RING; zinc-bi 88.4 0.39 1.3E-05 34.2 3.5 47 292-342 8-59 (60)
74 4ayb_P DNA-directed RNA polyme 87.2 0.028 9.7E-07 38.2 -3.0 26 309-339 7-32 (48)
75 2nxp_A Transcription initiatio 81.2 2.2 7.6E-05 36.1 5.5 63 133-199 33-99 (156)
76 2ecn_A Ring finger protein 141 79.0 0.4 1.4E-05 34.3 0.0 46 265-312 16-70 (70)
77 2jr6_A UPF0434 protein NMA0874 75.1 1.2 4E-05 32.7 1.6 41 286-348 4-44 (68)
78 2jny_A Uncharacterized BCR; st 75.0 1 3.5E-05 33.0 1.3 42 285-348 5-46 (67)
79 2hf1_A Tetraacyldisaccharide-1 74.1 0.86 2.9E-05 33.5 0.7 40 287-348 5-44 (68)
80 2j49_A Transcription initiatio 73.3 1.7 5.8E-05 36.7 2.4 61 132-197 15-79 (148)
81 2js4_A UPF0434 protein BB2007; 71.3 1.4 4.8E-05 32.5 1.3 41 286-348 4-44 (70)
82 2pk7_A Uncharacterized protein 69.6 1.4 4.7E-05 32.5 0.9 21 328-348 24-44 (69)
83 2yru_A Steroid receptor RNA ac 68.6 13 0.00045 30.0 6.7 45 89-137 39-83 (118)
84 2ct0_A Non-SMC element 1 homol 67.5 3.1 0.0001 30.9 2.4 33 310-343 33-65 (74)
85 1vd4_A Transcription initiatio 67.1 2.3 7.9E-05 29.3 1.6 36 309-344 18-53 (62)
86 2jo8_A Serine/threonine-protei 66.9 6.8 0.00023 27.0 3.9 34 44-77 3-37 (51)
87 2j4b_A TAF5, transcription ini 66.9 8.8 0.0003 31.7 5.4 61 132-197 13-77 (138)
88 1f2i_G Fusion of N-terminal 17 62.9 8.9 0.0003 26.5 4.2 41 304-344 17-63 (73)
89 2jrr_A Uncharacterized protein 62.6 2.1 7.3E-05 31.3 0.7 19 328-346 38-56 (67)
90 2kpi_A Uncharacterized protein 61.0 3.3 0.00011 29.0 1.5 41 284-348 4-46 (56)
91 2xjy_A Rhombotin-2; oncoprotei 60.1 6.5 0.00022 31.4 3.4 57 285-344 23-80 (131)
92 2jvm_A Uncharacterized protein 57.4 3.5 0.00012 31.2 1.1 17 328-344 51-67 (80)
93 2jz8_A Uncharacterized protein 57.4 3.5 0.00012 31.7 1.1 19 328-346 46-64 (87)
94 4rxn_A Rubredoxin; electron tr 45.4 3.4 0.00011 28.9 -0.6 17 329-347 35-51 (54)
95 4gzn_C ZFP-57, zinc finger pro 44.9 15 0.00051 25.5 2.8 35 309-343 8-45 (60)
96 3q15_A PSP28, response regulat 44.5 57 0.0019 29.7 7.6 60 126-185 112-172 (378)
97 2m0f_A Zinc finger and BTB dom 44.4 8.8 0.0003 20.7 1.2 14 330-343 2-15 (29)
98 2i5o_A DNA polymerase ETA; zin 43.7 8.3 0.00028 25.0 1.1 17 328-344 7-23 (39)
99 2els_A Zinc finger protein 406 43.3 11 0.00037 22.0 1.6 15 329-343 8-22 (36)
100 1p7a_A BF3, BKLF, kruppel-like 43.2 10 0.00035 22.2 1.5 15 329-343 10-24 (37)
101 1ard_A Yeast transcription fac 42.8 8.9 0.0003 20.8 1.1 13 331-343 3-15 (29)
102 2kvh_A Zinc finger and BTB dom 42.5 10 0.00035 20.4 1.3 14 330-343 3-16 (27)
103 2dna_A Unnamed protein product 42.1 9.8 0.00034 27.7 1.4 25 119-143 34-60 (67)
104 1znf_A 31ST zinc finger from X 40.7 9.7 0.00033 20.3 1.0 13 331-343 2-14 (27)
105 2epa_A Krueppel-like factor 10 39.9 24 0.00081 24.2 3.2 34 311-344 25-63 (72)
106 3na7_A HP0958; flagellar bioge 39.8 18 0.00062 32.7 3.2 30 310-340 203-232 (256)
107 3uk3_C Zinc finger protein 217 39.6 20 0.00069 23.1 2.7 34 310-343 9-45 (57)
108 3nw0_A Non-structural maintena 39.6 25 0.00086 31.6 4.1 32 311-343 199-230 (238)
109 2e72_A POGO transposable eleme 39.5 5.8 0.0002 27.0 -0.2 18 328-345 10-27 (49)
110 2kvg_A Zinc finger and BTB dom 39.4 8.9 0.00031 20.9 0.7 14 330-343 3-16 (27)
111 2kvf_A Zinc finger and BTB dom 39.4 10 0.00036 20.4 1.0 14 330-343 3-16 (28)
112 2m0e_A Zinc finger and BTB dom 39.0 12 0.0004 20.1 1.2 14 331-344 3-16 (29)
113 3ulq_A Response regulator aspa 38.7 78 0.0027 28.7 7.6 59 126-184 114-173 (383)
114 1bbo_A Human enhancer-binding 38.6 22 0.00074 23.0 2.7 34 310-343 6-42 (57)
115 1rik_A E6APC1 peptide; E6-bind 38.3 12 0.00042 20.2 1.2 14 331-344 3-16 (29)
116 1x61_A Thyroid receptor intera 37.7 44 0.0015 23.3 4.5 59 265-325 6-66 (72)
117 2elt_A Zinc finger protein 406 37.6 14 0.00047 21.3 1.4 15 329-343 8-22 (36)
118 2elx_A Zinc finger protein 406 37.6 14 0.00049 21.0 1.5 15 329-343 6-20 (35)
119 1m3v_A FLIN4, fusion of the LI 37.0 8.3 0.00028 30.7 0.4 77 265-345 6-84 (122)
120 2m0d_A Zinc finger and BTB dom 37.0 12 0.00043 20.2 1.1 14 330-343 3-16 (30)
121 2lvu_A Zinc finger and BTB dom 43.2 7.2 0.00025 20.9 0.0 15 331-345 3-17 (26)
122 4gif_A Polycystic kidney disea 36.6 31 0.0011 23.1 3.1 35 70-108 9-43 (45)
123 3k1l_B Fancl; UBC, ring, RWD, 36.6 11 0.00037 36.3 1.2 34 309-342 332-373 (381)
124 1yk4_A Rubredoxin, RD; electro 36.5 5.5 0.00019 27.5 -0.7 11 329-339 34-44 (52)
125 2v5f_A Prolyl 4-hydroxylase su 36.4 1.3E+02 0.0043 22.2 7.4 57 125-181 15-73 (104)
126 1weo_A Cellulose synthase, cat 36.1 29 0.00098 26.7 3.2 49 291-341 17-69 (93)
127 2adr_A ADR1; transcription reg 35.8 26 0.00088 22.9 2.8 33 311-343 8-43 (60)
128 2lv2_A Insulinoma-associated p 35.3 22 0.00076 26.4 2.6 35 310-344 33-70 (85)
129 1paa_A Yeast transcription fac 35.2 15 0.00051 20.0 1.3 14 331-344 3-16 (30)
130 2elq_A Zinc finger protein 406 35.1 16 0.00055 21.2 1.4 15 329-343 8-22 (36)
131 2elp_A Zinc finger protein 406 35.1 16 0.00054 21.3 1.4 15 329-343 8-22 (37)
132 2elr_A Zinc finger protein 406 34.7 17 0.00058 20.9 1.5 15 329-343 8-22 (36)
133 1a1h_A QGSR zinc finger peptid 34.7 34 0.0012 24.2 3.5 34 309-342 38-74 (90)
134 2knz_A Ubiquilin-4; cytoplasm, 34.6 15 0.00053 25.1 1.4 22 120-141 27-50 (53)
135 2djb_A Polycomb group ring fin 34.0 17 0.00057 25.7 1.6 45 265-310 16-70 (72)
136 1klr_A Zinc finger Y-chromosom 34.0 13 0.00045 20.1 0.8 13 331-343 3-15 (30)
137 1srk_A Zinc finger protein ZFP 33.6 18 0.00061 20.7 1.5 15 329-343 6-20 (35)
138 2lce_A B-cell lymphoma 6 prote 33.2 30 0.001 23.8 2.9 34 310-343 22-58 (74)
139 2elo_A Zinc finger protein 406 33.0 16 0.00053 21.3 1.1 15 329-343 8-22 (37)
140 2cuq_A Four and A half LIM dom 33.0 47 0.0016 23.7 4.0 63 259-324 10-73 (80)
141 2dah_A Ubiquilin-3; UBA domain 32.8 19 0.00065 24.8 1.6 21 121-141 26-48 (54)
142 1deq_A Fibrinogen (alpha chain 32.8 55 0.0019 31.6 5.4 16 48-63 65-80 (390)
143 2lvr_A Zinc finger and BTB dom 38.7 9.4 0.00032 20.9 0.0 16 330-345 3-18 (30)
144 3mjh_B Early endosome antigen 32.4 16 0.00055 22.9 1.1 14 331-344 6-19 (34)
145 1x6e_A Zinc finger protein 24; 32.1 29 0.00099 23.8 2.6 35 309-343 18-55 (72)
146 2wbs_A Krueppel-like factor 4; 31.9 43 0.0015 23.5 3.7 33 311-343 43-78 (89)
147 1wr1_B Ubiquitin-like protein 31.5 20 0.00067 25.2 1.6 22 120-141 33-56 (58)
148 2rgt_A Fusion of LIM/homeobox 31.5 13 0.00044 31.3 0.7 82 265-346 66-149 (169)
149 1b8t_A Protein (CRP1); LIM dom 31.3 40 0.0014 28.7 3.9 58 266-325 9-67 (192)
150 2dlk_A Novel protein; ZF-C2H2 31.3 42 0.0014 23.1 3.4 31 311-341 46-79 (79)
151 2lvt_A Zinc finger and BTB dom 37.3 10 0.00035 20.7 0.0 14 331-344 3-16 (29)
152 2elv_A Zinc finger protein 406 31.1 21 0.00072 20.6 1.5 15 329-343 8-22 (36)
153 2drp_A Protein (tramtrack DNA- 31.0 45 0.0015 22.1 3.4 35 310-344 15-54 (66)
154 2gmg_A Hypothetical protein PF 30.4 14 0.00049 29.2 0.7 29 305-341 67-95 (105)
155 1deq_A Fibrinogen (alpha chain 30.4 2.4E+02 0.0083 27.1 9.4 24 58-81 57-80 (390)
156 2el5_A Zinc finger protein 268 29.9 22 0.00074 21.4 1.4 15 329-343 9-23 (42)
157 2bwb_A Ubiquitin-like protein 29.8 20 0.00068 23.8 1.3 20 120-139 23-44 (46)
158 2ytb_A Zinc finger protein 32; 29.8 23 0.00077 21.2 1.5 15 329-343 10-24 (42)
159 1rim_A E6APC2 peptide; E6-bind 29.6 17 0.00059 20.9 0.9 13 331-343 3-15 (33)
160 2eof_A Zinc finger protein 268 29.5 24 0.0008 21.4 1.6 15 329-343 11-25 (44)
161 1njq_A Superman protein; zinc- 29.3 23 0.00079 21.0 1.5 15 329-343 5-19 (39)
162 1yuz_A Nigerythrin; rubrythrin 29.1 18 0.00063 31.7 1.3 9 331-339 187-195 (202)
163 2elm_A Zinc finger protein 406 29.0 19 0.00065 21.2 1.0 15 329-343 8-22 (37)
164 1x6a_A LIMK-2, LIM domain kina 29.0 97 0.0033 22.0 5.2 64 259-324 10-75 (81)
165 2ept_A Zinc finger protein 32; 28.8 24 0.00082 21.1 1.5 15 329-343 9-23 (41)
166 3hkz_Y DNA-directed RNA polyme 28.7 39 0.0013 25.9 2.8 41 109-149 37-79 (104)
167 2enf_A Zinc finger protein 347 28.6 24 0.00081 21.8 1.5 16 329-344 11-26 (46)
168 2emi_A Zinc finger protein 484 28.4 24 0.0008 21.8 1.5 15 329-343 11-25 (46)
169 2yte_A Zinc finger protein 473 28.4 25 0.00084 21.1 1.5 16 329-344 9-24 (42)
170 2en2_A B-cell lymphoma 6 prote 28.4 24 0.00083 21.2 1.5 15 329-343 10-24 (42)
171 2jy5_A Ubiquilin-1; UBA, alter 28.2 17 0.00059 24.7 0.8 23 119-141 27-51 (52)
172 2yts_A Zinc finger protein 484 28.0 24 0.00082 21.7 1.4 15 329-343 11-25 (46)
173 2eow_A Zinc finger protein 347 27.9 26 0.00088 21.5 1.6 16 329-344 11-26 (46)
174 2epv_A Zinc finger protein 268 27.9 25 0.00086 21.5 1.5 15 329-343 11-25 (44)
175 2xqn_T Testin, TESS; metal-bin 27.9 35 0.0012 26.7 2.7 52 285-343 24-76 (126)
176 2yu5_A Zinc finger protein 473 27.6 28 0.00095 21.2 1.7 16 329-344 11-26 (44)
177 2emg_A Zinc finger protein 484 27.2 26 0.0009 21.5 1.5 15 329-343 11-25 (46)
178 3knv_A TNF receptor-associated 27.0 17 0.00059 29.8 0.7 76 265-343 32-119 (141)
179 2en7_A Zinc finger protein 268 26.9 24 0.00081 21.4 1.2 16 329-344 11-26 (44)
180 2ytf_A Zinc finger protein 268 26.7 27 0.00092 21.4 1.5 15 329-343 11-25 (46)
181 2eq1_A Zinc finger protein 347 26.6 26 0.00088 21.6 1.4 15 329-343 11-25 (46)
182 2yrj_A Zinc finger protein 473 26.6 27 0.00093 21.4 1.5 15 329-343 11-25 (46)
183 2emb_A Zinc finger protein 473 26.6 28 0.00095 21.2 1.5 15 329-343 11-25 (44)
184 2jp9_A Wilms tumor 1; DNA bind 26.6 62 0.0021 24.1 3.9 12 330-341 94-107 (119)
185 2epc_A Zinc finger protein 32; 26.4 27 0.00091 20.9 1.4 15 329-343 10-24 (42)
186 2eoj_A Zinc finger protein 268 26.4 23 0.00078 21.5 1.1 16 329-344 11-26 (44)
187 2ctd_A Zinc finger protein 512 26.4 52 0.0018 24.5 3.3 34 310-343 39-75 (96)
188 2ely_A Zinc finger protein 224 26.2 32 0.0011 21.1 1.8 17 329-345 11-27 (46)
189 2dak_A Ubiquitin carboxyl-term 26.1 64 0.0022 22.6 3.5 26 120-145 24-51 (63)
190 2ebt_A Krueppel-like factor 5; 26.1 64 0.0022 23.1 3.8 33 311-343 53-88 (100)
191 2em4_A Zinc finger protein 28 25.8 27 0.00093 21.5 1.4 15 329-343 11-25 (46)
192 2enh_A Zinc finger protein 28 25.7 32 0.0011 21.2 1.7 16 329-344 11-26 (46)
193 1vej_A Riken cDNA 4931431F19; 25.6 25 0.00084 26.0 1.3 22 120-141 45-68 (74)
194 2emj_A Zinc finger protein 28 25.6 28 0.00097 21.4 1.4 15 329-343 11-25 (46)
195 2cp9_A EF-TS, EF-TSMT, elongat 25.6 64 0.0022 23.1 3.4 22 122-143 27-50 (64)
196 2g3q_A Protein YBL047C; endocy 25.6 59 0.002 20.7 3.0 22 120-141 19-42 (43)
197 2yti_A Zinc finger protein 347 25.6 25 0.00085 21.6 1.2 16 329-344 11-26 (46)
198 2ep3_A Zinc finger protein 484 25.5 29 0.001 21.3 1.5 15 329-343 11-25 (46)
199 2en9_A Zinc finger protein 28 25.5 29 0.00099 21.4 1.5 15 329-343 11-25 (46)
200 2ytp_A Zinc finger protein 484 25.5 29 0.001 21.4 1.5 15 329-343 11-25 (46)
201 2eoy_A Zinc finger protein 473 25.4 32 0.0011 21.2 1.7 16 329-344 11-26 (46)
202 2eon_A ZFP-95, zinc finger pro 25.4 29 0.00098 21.5 1.4 16 329-344 11-26 (46)
203 1u5p_A Spectrin alpha chain, b 25.3 2.9E+02 0.01 22.9 10.6 77 63-145 45-132 (216)
204 1wgn_A UBAP1, ubiquitin associ 25.2 64 0.0022 23.1 3.3 21 121-141 35-57 (63)
205 2epw_A Zinc finger protein 268 25.2 33 0.0011 21.0 1.7 16 329-344 11-26 (46)
206 2eoz_A Zinc finger protein 473 25.1 25 0.00087 21.7 1.1 16 329-344 11-26 (46)
207 2kfq_A FP1; protein, de novo p 25.0 18 0.00061 20.6 0.3 13 331-343 3-15 (32)
208 2ene_A Zinc finger protein 347 25.0 29 0.00098 21.3 1.4 16 329-344 11-26 (46)
209 2eov_A Zinc finger protein 484 25.0 29 0.001 21.2 1.4 15 329-343 11-25 (46)
210 2em3_A Zinc finger protein 28 25.0 30 0.001 21.3 1.4 15 329-343 11-25 (46)
211 2eor_A Zinc finger protein 224 24.9 32 0.0011 21.1 1.6 15 329-343 11-25 (46)
212 2eme_A Zinc finger protein 473 24.9 30 0.001 21.2 1.5 15 329-343 11-25 (46)
213 1iml_A CRIP, cysteine rich int 24.9 20 0.00069 25.6 0.7 48 285-339 21-70 (76)
214 2eml_A Zinc finger protein 28 24.8 30 0.001 21.2 1.4 17 328-344 10-26 (46)
215 2en3_A ZFP-95, zinc finger pro 24.7 34 0.0012 20.9 1.7 16 329-344 11-26 (46)
216 2eos_A B-cell lymphoma 6 prote 24.6 30 0.001 20.7 1.4 15 329-343 10-24 (42)
217 2eq3_A Zinc finger protein 347 24.6 25 0.00086 21.6 1.0 15 329-343 11-25 (46)
218 2eox_A Zinc finger protein 473 24.6 31 0.001 21.0 1.4 16 329-344 11-26 (44)
219 2em6_A Zinc finger protein 224 24.6 31 0.0011 21.2 1.5 15 329-343 11-25 (46)
220 2cos_A Serine/threonine protei 24.6 63 0.0021 22.4 3.0 20 121-140 25-47 (54)
221 3rkv_A Putative peptidylprolyl 24.5 2.4E+02 0.0083 21.6 7.5 53 125-182 73-125 (162)
222 2ep1_A Zinc finger protein 484 24.5 28 0.00096 21.3 1.2 15 329-343 11-25 (46)
223 2yto_A Zinc finger protein 484 24.5 31 0.0011 21.3 1.5 15 329-343 11-25 (46)
224 2em2_A Zinc finger protein 28 24.4 31 0.0011 21.2 1.5 15 329-343 11-25 (46)
225 3frr_A Uncharacterized protein 24.4 98 0.0034 26.9 5.1 53 86-140 8-60 (191)
226 2ytg_A ZFP-95, zinc finger pro 24.3 36 0.0012 20.8 1.8 16 329-344 11-26 (46)
227 2eq2_A Zinc finger protein 347 24.3 28 0.00095 21.4 1.2 15 329-343 11-25 (46)
228 2yth_A Zinc finger protein 224 24.2 31 0.0011 21.3 1.4 16 329-344 11-26 (46)
229 1fv5_A First zinc finger of U- 24.2 27 0.00092 21.6 1.1 16 328-343 6-21 (36)
230 2emh_A Zinc finger protein 484 24.2 33 0.0011 21.0 1.6 16 329-344 11-26 (46)
231 2em5_A ZFP-95, zinc finger pro 24.1 31 0.0011 21.2 1.4 15 329-343 11-25 (46)
232 2emf_A Zinc finger protein 484 24.1 31 0.0011 21.2 1.4 16 329-344 11-26 (46)
233 2eop_A Zinc finger protein 268 24.1 33 0.0011 20.9 1.6 15 329-343 11-25 (46)
234 2cot_A Zinc finger protein 435 24.0 49 0.0017 22.8 2.6 35 310-344 23-60 (77)
235 2em7_A Zinc finger protein 224 23.9 33 0.0011 21.1 1.5 15 329-343 11-25 (46)
236 1x5w_A Zinc finger protein 64, 23.9 83 0.0028 21.1 3.8 35 309-343 13-50 (70)
237 2epx_A Zinc finger protein 28 23.8 33 0.0011 21.0 1.5 16 329-344 11-26 (47)
238 2em9_A Zinc finger protein 224 23.8 33 0.0011 21.0 1.5 15 329-343 11-25 (46)
239 2ytj_A Zinc finger protein 484 23.8 32 0.0011 21.1 1.4 17 328-344 10-26 (46)
240 2eq0_A Zinc finger protein 347 23.8 34 0.0012 20.9 1.6 17 328-344 10-26 (46)
241 2ytk_A Zinc finger protein 347 23.8 31 0.0011 21.1 1.4 16 329-344 11-26 (46)
242 3iuf_A Zinc finger protein UBI 23.8 32 0.0011 21.8 1.5 15 329-343 6-20 (48)
243 2em8_A Zinc finger protein 224 23.7 32 0.0011 21.1 1.4 15 329-343 11-25 (46)
244 2eoh_A Zinc finger protein 28 23.7 30 0.001 21.3 1.3 15 329-343 11-25 (46)
245 1wji_A Tudor domain containing 23.7 72 0.0025 22.5 3.4 25 120-144 24-50 (63)
246 2ytn_A Zinc finger protein 347 23.7 34 0.0011 21.0 1.5 16 329-344 11-26 (46)
247 2el4_A Zinc finger protein 268 23.6 33 0.0011 21.0 1.4 16 329-344 11-26 (46)
248 2eoq_A Zinc finger protein 224 23.5 30 0.001 21.2 1.3 15 329-343 11-25 (46)
249 2epz_A Zinc finger protein 28 23.5 35 0.0012 20.9 1.6 16 329-344 11-26 (46)
250 2en8_A Zinc finger protein 224 23.5 34 0.0012 20.9 1.5 15 329-343 11-25 (46)
251 1yui_A GAGA-factor; complex (D 23.5 33 0.0011 22.2 1.5 16 328-343 22-37 (54)
252 2dkl_A Trinucleotide repeat co 23.5 52 0.0018 24.8 2.8 29 120-148 36-66 (85)
253 2eoo_A ZFP-95, zinc finger pro 23.5 34 0.0012 21.0 1.5 15 329-343 11-25 (46)
254 2eou_A Zinc finger protein 473 23.4 32 0.0011 20.9 1.4 15 329-343 11-25 (44)
255 2emm_A ZFP-95, zinc finger pro 23.4 34 0.0012 20.9 1.5 16 329-344 11-26 (46)
256 2epu_A Zinc finger protein 32; 23.3 29 0.00099 21.3 1.1 15 329-343 11-25 (45)
257 2emx_A Zinc finger protein 268 23.3 33 0.0011 20.8 1.4 16 329-344 9-24 (44)
258 1whc_A RSGI RUH-027, UBA/UBX 3 23.2 76 0.0026 22.4 3.5 25 120-144 24-51 (64)
259 2rgt_A Fusion of LIM/homeobox 23.2 74 0.0025 26.4 4.0 71 266-344 8-79 (169)
260 2eom_A ZFP-95, zinc finger pro 23.2 32 0.0011 21.2 1.3 15 329-343 11-25 (46)
261 2d8y_A Eplin protein; LIM doma 23.1 63 0.0022 23.8 3.2 59 264-324 15-74 (91)
262 2p22_B Vacuolar protein sortin 23.1 1.4E+02 0.0049 23.9 5.4 54 69-122 42-106 (118)
263 2ep2_A Zinc finger protein 484 23.1 35 0.0012 20.9 1.5 15 329-343 11-25 (46)
264 2emz_A ZFP-95, zinc finger pro 23.1 33 0.0011 21.1 1.4 16 329-344 11-26 (46)
265 2lcq_A Putative toxin VAPC6; P 23.0 17 0.00059 30.4 -0.0 23 309-340 136-158 (165)
266 2ekk_A UBA domain from E3 ubiq 22.9 65 0.0022 21.0 2.9 22 120-141 24-46 (47)
267 2emy_A Zinc finger protein 268 22.8 34 0.0012 21.0 1.4 15 329-343 11-25 (46)
268 2eod_A TNF receptor-associated 22.6 70 0.0024 21.4 3.2 35 309-343 14-50 (66)
269 2elz_A Zinc finger protein 224 22.6 35 0.0012 21.0 1.4 16 329-344 11-26 (46)
270 2yu8_A Zinc finger protein 347 22.5 39 0.0013 20.7 1.7 16 329-344 11-26 (46)
271 2emk_A Zinc finger protein 28 22.5 34 0.0012 21.0 1.4 16 329-344 11-26 (46)
272 2emp_A Zinc finger protein 347 22.5 36 0.0012 20.8 1.5 16 329-344 11-26 (46)
273 2el6_A Zinc finger protein 268 22.5 35 0.0012 20.9 1.4 15 329-343 11-25 (46)
274 2eps_A POZ-, at HOOK-, and zin 22.4 95 0.0033 19.8 3.7 33 310-342 17-53 (54)
275 2ema_A Zinc finger protein 347 22.4 35 0.0012 20.9 1.4 15 329-343 11-25 (46)
276 2em0_A Zinc finger protein 224 22.4 35 0.0012 20.9 1.4 16 329-344 11-26 (46)
277 3edu_A Beta-I spectrin, spectr 22.3 3.5E+02 0.012 22.7 10.0 87 53-145 37-131 (218)
278 1lv3_A Hypothetical protein YA 22.3 31 0.001 25.2 1.2 15 329-343 8-22 (68)
279 2crn_A Ubash3A protein; compac 22.3 82 0.0028 22.3 3.5 24 120-143 24-50 (64)
280 3hrn_A Transient receptor pote 22.3 91 0.0031 22.3 3.6 36 71-110 9-44 (64)
281 2yso_A ZFP-95, zinc finger pro 22.3 38 0.0013 20.7 1.6 15 329-343 11-25 (46)
282 1llm_C Chimera of ZIF23-GCN4; 22.1 56 0.0019 23.2 2.7 33 311-343 9-44 (88)
283 2eq4_A Zinc finger protein 224 21.9 37 0.0013 20.7 1.4 15 329-343 11-25 (46)
284 2caz_B Vacuolar protein sortin 21.8 1.3E+02 0.0045 25.3 5.1 52 69-120 50-112 (155)
285 2ysp_A Zinc finger protein 224 21.7 32 0.0011 21.1 1.1 15 329-343 11-25 (46)
286 2enc_A Zinc finger protein 224 21.6 39 0.0013 20.7 1.5 15 329-343 11-25 (46)
287 2ytq_A Zinc finger protein 268 21.6 38 0.0013 20.8 1.5 15 329-343 11-25 (46)
288 2ytr_A Zinc finger protein 347 21.6 34 0.0012 20.9 1.2 16 329-344 11-26 (46)
289 2yrm_A B-cell lymphoma 6 prote 21.4 38 0.0013 20.5 1.4 15 329-343 9-23 (43)
290 2en1_A Zinc finger protein 224 21.3 34 0.0012 20.9 1.2 16 329-344 11-26 (46)
291 2kmk_A Zinc finger protein GFI 21.1 61 0.0021 22.2 2.7 34 310-343 34-70 (82)
292 2jtn_A LIM domain-binding prot 21.0 54 0.0019 27.6 2.7 60 264-323 119-180 (182)
293 2en6_A Zinc finger protein 268 20.9 34 0.0012 21.0 1.1 16 329-344 11-26 (46)
294 2ep0_A Zinc finger protein 28 20.8 41 0.0014 20.6 1.5 16 328-343 10-25 (46)
295 2ytm_A Zinc finger protein 28 20.6 37 0.0013 20.9 1.3 16 329-344 11-26 (46)
296 3mv2_B Coatomer subunit epsilo 20.6 1.7E+02 0.0058 27.1 6.3 50 128-180 113-162 (310)
297 2ytd_A Zinc finger protein 473 20.6 42 0.0014 20.5 1.5 16 329-344 11-26 (46)
298 3ghg_A Fibrinogen alpha chain; 20.5 2.9E+02 0.01 27.8 8.1 25 109-133 171-195 (562)
299 1z96_A DNA-damage, UBA-domain 20.5 88 0.003 19.2 3.1 18 121-138 20-39 (40)
300 1wyh_A SLIM 2, skeletal muscle 20.5 65 0.0022 22.3 2.7 58 265-324 6-65 (72)
301 2eoe_A Zinc finger protein 347 20.4 34 0.0012 20.9 1.0 16 329-344 11-26 (46)
302 1x3h_A Leupaxin; paxillin fami 20.2 63 0.0022 22.9 2.6 62 259-324 10-73 (80)
No 1
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.95 E-value=3.5e-10 Score=82.92 Aligned_cols=55 Identities=18% Similarity=0.334 Sum_probs=48.8
Q ss_pred eeeeeccccccCCCCCceec-cCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceeeec
Q 018698 290 KLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 290 ~~vCpis~e~~~e~NpP~~L-p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
.|+||||+++|.+ ||++ ++||||.+++|.+|.+++ + +||+|++..+.+++.++++
T Consensus 3 ~~~CpIs~~~m~d---PV~~~~sG~~yer~~I~~~l~~~-~--~cP~t~~~L~~~~Lip~~~ 58 (61)
T 2bay_A 3 HMLCAISGKVPRR---PVLSPKSRTIFEKSLLEQYVKDT-G--NDPITNEPLSIEEIVEIVP 58 (61)
T ss_dssp -CCCTTTCSCCSS---EEEETTTTEEEEHHHHHHHHHHH-S--BCTTTCCBCCGGGCEECCC
T ss_pred eEEecCCCCCCCC---CEEeCCCCcEEcHHHHHHHHHhC-C--CCcCCcCCCChhhcEECcc
Confidence 4899999999995 8999 999999999999998754 3 4999999999999998875
No 2
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.78 E-value=3.7e-09 Score=82.31 Aligned_cols=55 Identities=20% Similarity=0.146 Sum_probs=48.7
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
...|.|||++++|.+ ||++||||+|++.+|.++... ..+||.|++.+...++...
T Consensus 12 p~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~---~~~cP~~~~~l~~~~l~pn 66 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTD---PVRLPSGTVMDRSIILRHLLN---SPTDPFNRQMLTESMLEPV 66 (85)
T ss_dssp CTTTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHH---CSBCTTTCCBCCGGGCEEC
T ss_pred chheECcccCchhcC---CeECCCCCEECHHHHHHHHhc---CCCCCCCcCCCChHhcchH
Confidence 467899999999998 999999999999999999864 3689999999998877653
No 3
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.72 E-value=8e-09 Score=91.45 Aligned_cols=55 Identities=29% Similarity=0.388 Sum_probs=48.4
Q ss_pred CeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 289 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
+.|+||||+++|.+ ||++||||+|++.+|.++...+ +. .||.|++.+...++..-
T Consensus 105 ~~f~CPI~~elm~D---PV~~~~Ghtfer~~I~~~l~~~-~~-tcP~t~~~l~~~~L~pN 159 (179)
T 2f42_A 105 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRV-GH-FDPVTRSPLTQDQLIPN 159 (179)
T ss_dssp GGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHT-CS-BCTTTCCBCCGGGCEEC
T ss_pred HhhcccCccccCCC---CeECCCCCEECHHHHHHHHHhC-CC-CCCCCcCCCChhhCcch
Confidence 67899999999997 9999999999999999998754 33 79999999998887654
No 4
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=1e-08 Score=81.26 Aligned_cols=57 Identities=32% Similarity=0.461 Sum_probs=47.0
Q ss_pred CCeeeeeccccccCCCCCceecc-CCccchHHHHHHHHHhC---CCceecCC--CCcc-cCcCCcee
Q 018698 288 HSKLVCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKN---NGKITCPR--TGLV-CNYSDLVK 347 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp-~GhV~s~~al~~l~~~~---~~~~~CP~--~~~~-~~~~~~~k 347 (351)
...|+|||++++|.+ ||++| |||+|++.+|.++...+ .+.++||. |++. +...++..
T Consensus 5 ~~~~~CPI~~~~~~d---PV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~p 68 (94)
T 2yu4_A 5 SSGFTCPITKEEMKK---PVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQ 68 (94)
T ss_dssp SSCCBCTTTCSBCSS---EEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEE
T ss_pred CcEeECcCcCchhcC---CEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcC
Confidence 456899999999997 99997 99999999999998653 35689999 6655 77776654
No 5
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.68 E-value=7.5e-09 Score=83.15 Aligned_cols=56 Identities=18% Similarity=0.127 Sum_probs=49.0
Q ss_pred CCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 287 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
....|.|||++++|.+ ||++||||+|++.+|.++... ..+||.|++.+...++...
T Consensus 26 ~p~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~---~~~cP~~~~~l~~~~L~pn 81 (100)
T 2kre_A 26 APDEFRDPLMDTLMTD---PVRLPSGTIMDRSIILRHLLN---SPTDPFNRQTLTESMLEPV 81 (100)
T ss_dssp CSTTTBCTTTCSBCSS---EEEETTTEEEEHHHHHHHTTS---CSBCSSSCCBCCTTSSEEC
T ss_pred CcHhhCCcCccCcccC---CeECCCCCEEchHHHHHHHHc---CCCCCCCCCCCChhhceEC
Confidence 3467999999999998 999999999999999999752 4799999999998887654
No 6
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.64 E-value=1.4e-08 Score=81.25 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=48.4
Q ss_pred CCeeeeeccccccCCCCCceeccCC-ccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNG-YVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~G-hV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
...|.|||++++|.+ ||++||| |+|++.+|.++... ..+||.|++.+...++...
T Consensus 20 p~~~~CpI~~~~m~d---PV~~~cG~htf~r~cI~~~l~~---~~~cP~~~~~l~~~~L~pn 75 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCD---PVVLPSSRVTVDRSTIARHLLS---DQTDPFNRSPLTMDQIRPN 75 (98)
T ss_dssp CTTTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHTTT---SCBCTTTCSBCCTTTSEEC
T ss_pred cHhcCCcCccccccC---CeECCCCCeEECHHHHHHHHHh---CCCCCCCCCCCChhhceEc
Confidence 457899999999998 9999999 99999999999753 4699999999998887654
No 7
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.56 E-value=5.9e-08 Score=73.49 Aligned_cols=56 Identities=23% Similarity=0.449 Sum_probs=48.4
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
.+.|.|||..+.|.+ |+++||||+|++.+|.++.+. +..+||.|++.+...++..-
T Consensus 6 ~~~~~C~IC~~~~~~---Pv~~~CgH~fc~~Ci~~~~~~--~~~~CP~C~~~~~~~~l~~n 61 (78)
T 1t1h_A 6 PEYFRCPISLELMKD---PVIVSTGQTYERSSIQKWLDA--GHKTCPKSQETLLHAGLTPN 61 (78)
T ss_dssp SSSSSCTTTSCCCSS---EEEETTTEEEEHHHHHHHHTT--TCCBCTTTCCBCSSCCCEEC
T ss_pred cccCCCCCccccccC---CEEcCCCCeecHHHHHHHHHH--CcCCCCCCcCCCChhhCccC
Confidence 467899999999976 999999999999999999853 46899999999988877653
No 8
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.49 E-value=1.1e-07 Score=73.28 Aligned_cols=62 Identities=21% Similarity=0.358 Sum_probs=51.7
Q ss_pred CCCeeeeeccccccCCCC-CceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 287 HHSKLVCYITKELMDTEN-PPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~N-pP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
....+.|||-.+.+++.+ .|+++||||+|+..+|.+|.+...+..+||.|.+.+...++.++
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~i~~l 74 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQL 74 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSSTTTS
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchhHHHH
Confidence 456678999888886544 59999999999999999998776567999999999988876654
No 9
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.38 E-value=1.3e-07 Score=87.64 Aligned_cols=54 Identities=28% Similarity=0.348 Sum_probs=46.8
Q ss_pred CeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 289 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
+.|.|||+.+.|.+ ||++||||+|++.+|.++...++ ..||.|++.++..++..
T Consensus 207 ~~~~c~i~~~~~~d---Pv~~~~gh~f~~~~i~~~~~~~~--~~cP~~~~~~~~~~l~~ 260 (281)
T 2c2l_A 207 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVG--HFNPVTRSPLTQEQLIP 260 (281)
T ss_dssp STTBCTTTCSBCSS---EEECSSCCEEETTHHHHHHHHTC--SSCTTTCCCCCGGGCEE
T ss_pred cccCCcCcCCHhcC---CeECCCCCEECHHHHHHHHHHCC--CCCcCCCCCCchhcCcc
Confidence 67899999999998 99999999999999999986543 23999999998877654
No 10
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.36 E-value=1.6e-07 Score=67.97 Aligned_cols=56 Identities=21% Similarity=0.262 Sum_probs=45.7
Q ss_pred eeeccccccC----CCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceeeec
Q 018698 292 VCYITKELMD----TENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 292 vCpis~e~~~----e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
.|||-.+.+. ....+++++|||+|....+.+|.++ ..+||.|...+..+++.++||
T Consensus 5 ~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~~~~l 64 (64)
T 2xeu_A 5 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKKINHKRYHPIYI 64 (64)
T ss_dssp BCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH---CSBCTTTCCBCTTTCEEECCC
T ss_pred CCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc---CCCCCCCCccCCccceeeeeC
Confidence 4555555443 2456789999999999999999875 469999999999999999996
No 11
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=2.8e-07 Score=68.60 Aligned_cols=56 Identities=14% Similarity=0.404 Sum_probs=46.8
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 346 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 346 (351)
...+.|||-.+.+.+ |+++||||+|+..+|.+|.+...+..+||.|.+.+..++++
T Consensus 18 ~~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~r 73 (73)
T 2ysl_A 18 QEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 73 (73)
T ss_dssp CCCCBCTTTCSBCSS---EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCCCC
T ss_pred ccCCEeccCCcccCC---eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcccCC
Confidence 455788888887764 89999999999999999976445678999999999988763
No 12
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.30 E-value=2.4e-07 Score=68.53 Aligned_cols=45 Identities=22% Similarity=0.262 Sum_probs=40.4
Q ss_pred CCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceeeec
Q 018698 303 ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 303 ~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
...+++++|||+|...+|.+|.++. .+||.|...+..++++++||
T Consensus 27 ~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~~~~l 71 (71)
T 3ng2_A 27 GRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKKINHKRYHPIYI 71 (71)
T ss_dssp TCCEEECTTSCEEEHHHHHHHHHHC---SBCTTTCCBCCCCSCCCCCC
T ss_pred cCCeEeCCCCChHhHHHHHHHHHcC---CCCCCCCCccChhheeeccC
Confidence 3567899999999999999998654 59999999999999999996
No 13
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.24 E-value=1.2e-06 Score=66.74 Aligned_cols=60 Identities=18% Similarity=0.323 Sum_probs=48.4
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhC---CCceecCCCCcccCcCCceeeec
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKN---NGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~---~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
...+.|||-.+.+.+ |+++||||+|+..+|.++.... .+...||.|...+..+++.+-+.
T Consensus 17 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~ 79 (85)
T 2ecw_A 17 KEEVTCPICLELLKE---PVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKPNLH 79 (85)
T ss_dssp CTTTSCTTTCSCCSS---CEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEECSC
T ss_pred ccCCCCcCCChhhCc---ceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCcCHH
Confidence 345678887777654 8899999999999999988763 35799999999999988876553
No 14
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=8.4e-07 Score=67.53 Aligned_cols=59 Identities=22% Similarity=0.408 Sum_probs=48.3
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHh---CCCceecCCCCcccCcCCceeee
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKK---NNGKITCPRTGLVCNYSDLVKAY 349 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~---~~~~~~CP~~~~~~~~~~~~kvy 349 (351)
...+.|||-.+.+.+ |+++||||+|+..+|.++... .++..+||.|...+...++.+-+
T Consensus 17 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~ 78 (85)
T 2ecv_A 17 KEEVTCPICLELLTQ---PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNR 78 (85)
T ss_dssp CCCCCCTTTCSCCSS---CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCSC
T ss_pred cCCCCCCCCCcccCC---ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCccH
Confidence 455778888877754 899999999999999998765 35679999999999988876654
No 15
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.20 E-value=1.2e-06 Score=63.94 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=44.7
Q ss_pred eeeecccc-ccCC-CCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceeeec
Q 018698 291 LVCYITKE-LMDT-ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 291 ~vCpis~e-~~~e-~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
+.|||-.+ .+.+ .-++++++|||+|+...|.++..+ +...||.|++.+...+++.++|
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~--~~~~CP~Cr~~~~~~~~~~~~~ 63 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR--GAGNCPECGTPLRKSNFRVQLF 63 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHT--TSSSCTTTCCCCSSCCCEEECC
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHc--CCCcCCCCCCccccccceeecc
Confidence 34666665 4433 233467999999999999999653 3579999999999999998875
No 16
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.16 E-value=4.3e-07 Score=68.57 Aligned_cols=60 Identities=23% Similarity=0.427 Sum_probs=48.8
Q ss_pred CCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhC----CCceecCCCCcccCcCCceeee
Q 018698 287 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKN----NGKITCPRTGLVCNYSDLVKAY 349 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~----~~~~~CP~~~~~~~~~~~~kvy 349 (351)
....+.|||-.+.+.+ |+++||||+|++.+|.++.+.. .+..+||.|...+...++++-+
T Consensus 9 ~~~~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~ 72 (79)
T 2egp_A 9 VQEEVTCPICLELLTE---PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQ 72 (79)
T ss_dssp CCCCCEETTTTEECSS---CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGTCS
T ss_pred cccCCCCcCCCcccCC---eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCcCH
Confidence 4456889999988865 8999999999999999886532 3478999999999988776544
No 17
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.15 E-value=9.8e-07 Score=71.05 Aligned_cols=56 Identities=18% Similarity=0.284 Sum_probs=45.2
Q ss_pred eeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 290 KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 290 ~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
.+.|||-.+.+. .|+++||||+|+..+|.++.....+.+.||.|...+...++.+.
T Consensus 21 ~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~~~ 76 (112)
T 1jm7_A 21 ILECPICLELIK---EPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQES 76 (112)
T ss_dssp HTSCSSSCCCCS---SCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCC
T ss_pred CCCCcccChhhc---CeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcCcc
Confidence 345666666554 38889999999999999998766667899999999998877654
No 18
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=2.8e-06 Score=62.12 Aligned_cols=54 Identities=9% Similarity=0.162 Sum_probs=45.1
Q ss_pred CCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCc
Q 018698 287 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDL 345 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~ 345 (351)
....+.|||-.+.+.+ |++++|||+|+..+|.++.+ .+..+||.|...+..+++
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~~~~~i 65 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCS---PKQTECGHRFCESCMAALLS--SSSPKCTACQESIVKDKV 65 (66)
T ss_dssp CCCCEECTTTCCEESS---CCCCSSSCCCCHHHHHHHHT--TSSCCCTTTCCCCCTTTC
T ss_pred CCcCCCCCCCChHhcC---eeECCCCCHHHHHHHHHHHH--hCcCCCCCCCcCCChhhc
Confidence 3456889999888864 88899999999999999974 346799999999988764
No 19
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.11 E-value=3e-06 Score=61.32 Aligned_cols=47 Identities=17% Similarity=0.494 Sum_probs=39.5
Q ss_pred CCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCC
Q 018698 287 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRT 336 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~ 336 (351)
....+.|||-.+.+.+ |+++||||+|++..|.+|.+..++..+||.|
T Consensus 17 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSS---CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CccCCCCCcCCchhCC---eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 4456788888887764 8999999999999999998766667899987
No 20
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.11 E-value=3.1e-06 Score=65.90 Aligned_cols=55 Identities=24% Similarity=0.467 Sum_probs=45.2
Q ss_pred CCeeeeeccccccCCCCCceecc-CCccchHHHHHHHHHhCCCceecCCCCccc-CcCCce
Q 018698 288 HSKLVCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKNNGKITCPRTGLVC-NYSDLV 346 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp-~GhV~s~~al~~l~~~~~~~~~CP~~~~~~-~~~~~~ 346 (351)
...|.|||-.+.+.+ |+++| |||+|++.+|.++.... +...||.|.+.+ ..+++.
T Consensus 11 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~-~~~~CP~Cr~~~~~~~~~~ 67 (92)
T 3ztg_A 11 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLES-DEHTCPTCHQNDVSPDALI 67 (92)
T ss_dssp CTTTEETTTTEECSS---CEECTTTCCEECHHHHHHHHHHC-TTCCCTTTCCSSCCTTSCE
T ss_pred CcCCCCCCCChhhcC---ceECCCCCCHHHHHHHHHHHHhc-CCCcCcCCCCcCCCccccC
Confidence 456899999999975 89999 99999999999987643 458999999997 444443
No 21
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.09 E-value=1.2e-06 Score=81.56 Aligned_cols=57 Identities=19% Similarity=0.378 Sum_probs=48.5
Q ss_pred CCCeeeeeccccccCCCCCceec-cCCccchHHHHHHHHHhCCCceecCC--CCcccCcCCcee
Q 018698 287 HHSKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPR--TGLVCNYSDLVK 347 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~NpP~~L-p~GhV~s~~al~~l~~~~~~~~~CP~--~~~~~~~~~~~k 347 (351)
..--|.|||+++.|.+ ||.. .|||+|++.+|.++.+. ++.++||. |.+.+...+++.
T Consensus 178 ~~~el~CPIcl~~f~D---PVts~~CGHsFcR~cI~~~~~~-~~~~~CPvtGCr~~l~~~dL~p 237 (267)
T 3htk_C 178 GKIELTCPITCKPYEA---PLISRKCNHVFDRDGIQNYLQG-YTTRDCPQAACSQVVSMRDFVR 237 (267)
T ss_dssp SBCCSBCTTTSSBCSS---EEEESSSCCEEEHHHHHHHSTT-CSCEECSGGGCSCEECGGGEEE
T ss_pred CceeeECcCccCcccC---CeeeCCCCCcccHHHHHHHHHh-CCCCCCCcccccCcCchhhCCc
Confidence 4567899999999987 9985 99999999999998653 46799999 889998887653
No 22
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.02 E-value=3.6e-06 Score=69.22 Aligned_cols=82 Identities=16% Similarity=0.165 Sum_probs=63.1
Q ss_pred CCCCCCCchhhhcccCCCCCCCCCCCeeeeeccccccCC----CCCceeccCCccchHHHHHHHHHhCCCceecCCCCcc
Q 018698 264 TKEDPLSQESFRKLASPLPYSKQHHSKLVCYITKELMDT----ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLV 339 (351)
Q Consensus 264 ~~~cP~c~~~~~~l~~~LP~~~~~hS~~vCpis~e~~~e----~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~ 339 (351)
+..||+|...+..- ++...+.....+.|+|-.+.+.+ ...++.++|||+|....|.+|.+.. ..||.|...
T Consensus 48 ~~~CP~Cr~~~~~~--~l~~l~i~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~ 122 (133)
T 4ap4_A 48 ANTCPTCRKKINHK--RYHPIYIGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKK 122 (133)
T ss_dssp CSBCTTTCCBCTTT--CEEECBCSSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHC---SBCTTTCCB
T ss_pred CCCCCCCCCcCccc--cccccccCCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcC---CCCCCCCCc
Confidence 45799998876432 11112334566789998887754 3556899999999999999998653 599999999
Q ss_pred cCcCCceeeec
Q 018698 340 CNYSDLVKAYI 350 (351)
Q Consensus 340 ~~~~~~~kvyi 350 (351)
+..+++.++||
T Consensus 123 ~~~~~~~~~~~ 133 (133)
T 4ap4_A 123 INHKRYHPIYI 133 (133)
T ss_dssp CCGGGEEEECC
T ss_pred CChhcceeeeC
Confidence 99999999996
No 23
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.93 E-value=7.3e-06 Score=65.18 Aligned_cols=57 Identities=12% Similarity=0.265 Sum_probs=46.2
Q ss_pred CeeeeeccccccCCCCCcee-ccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceeeec
Q 018698 289 SKLVCYITKELMDTENPPQV-LPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~-Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
..+.|||-.+.+.+ |+. ++|||+|+..+|.+|.+.. ...||.|...+..+++.+.++
T Consensus 21 ~~~~C~IC~~~~~~---p~~~~~CgH~FC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~l~~~~~ 78 (100)
T 3lrq_A 21 EVFRCFICMEKLRD---ARLCPHCSKLCCFSCIRRWLTEQ--RAQCPHCRAPLQLRELVNCRW 78 (100)
T ss_dssp HHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHHHT--CSBCTTTCCBCCGGGCEECTT
T ss_pred CCCCCccCCccccC---ccccCCCCChhhHHHHHHHHHHC--cCCCCCCCCcCCHHHhHhhHH
Confidence 34567777777654 888 9999999999999998754 279999999999998887653
No 24
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=97.92 E-value=6.6e-06 Score=67.77 Aligned_cols=47 Identities=15% Similarity=0.195 Sum_probs=37.7
Q ss_pred eeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 291 LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 291 ~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
+.|||-.+.+. .|+.+||||+|+..+|.++.. .+...||.|...+..
T Consensus 53 ~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 53 FQCICCQELVF---RPITTVCQHNVCKDCLDRSFR--AQVFSCPACRYDLGR 99 (124)
T ss_dssp TBCTTTSSBCS---SEEECTTSCEEEHHHHHHHHH--TTCCBCTTTCCBCCT
T ss_pred CCCCcCChHHc---CcEEeeCCCcccHHHHHHHHh--HCcCCCCCCCccCCC
Confidence 45555555555 389999999999999999876 345799999999977
No 25
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=97.91 E-value=5.5e-06 Score=62.11 Aligned_cols=53 Identities=25% Similarity=0.459 Sum_probs=43.2
Q ss_pred CCeeeeeccccccCCCCCceecc-CCccchHHHHHHHHHhCCCceecCCCCcccCcCC
Q 018698 288 HSKLVCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp-~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 344 (351)
...+.|||-.+.+.+ |+++| |||+|++.+|.++.+.. +...||.|.+.+...+
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~-~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 13 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLES-DEHTCPTCHQNDVSPD 66 (74)
T ss_dssp CGGGSCSSSCCCCTT---CEECSSSCCEECTTHHHHHHHHS-SSSCCSSSCCSSCCTT
T ss_pred CCCCCCcCCChHHhC---CeEcCCCCCHHHHHHHHHHHHhc-CCCcCCCCCCcCCCcc
Confidence 356789998888865 89999 99999999999998754 4679999999865443
No 26
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=97.86 E-value=8.4e-06 Score=57.01 Aligned_cols=48 Identities=27% Similarity=0.358 Sum_probs=38.2
Q ss_pred eeeecccccc-CCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccC
Q 018698 291 LVCYITKELM-DTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 341 (351)
Q Consensus 291 ~vCpis~e~~-~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~ 341 (351)
..|+|-.+.+ +.+++++++||||+|....|.+|.+.. .+||.|...+.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~ 54 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG---YRCPLCSGPSS 54 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT---CCCTTSCCSSC
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC---CcCCCCCCcCC
Confidence 4466666655 456789999999999999999998754 79999998764
No 27
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.86 E-value=1.2e-05 Score=59.85 Aligned_cols=54 Identities=11% Similarity=0.231 Sum_probs=44.5
Q ss_pred CCeeeeeccccccCCCCCceec-cCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 288 HSKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~L-p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
...+.|||-.+.+.+ |+++ +|||+|+..+|.++.+. ..+||.|.+.+...+...
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~~ 67 (72)
T 2djb_A 13 TPYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY---SNRCPKCNIVVHQTQPLS 67 (72)
T ss_dssp CGGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH---CSSCTTTCCCCCSSCSCC
T ss_pred CCCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc---CCcCCCcCcccCcccccc
Confidence 456788888877765 7887 99999999999999865 479999999998877643
No 28
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.81 E-value=1.8e-05 Score=64.70 Aligned_cols=59 Identities=15% Similarity=0.208 Sum_probs=48.6
Q ss_pred CCCCCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 284 SKQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 284 ~~~~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
.-.....+.|||-.+.+.+ |+.+||||+|++.+|.++.+.+. .+||.|...+..+++.+
T Consensus 12 ~~~~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~--~~CP~Cr~~~~~~~~~~ 70 (118)
T 3hct_A 12 DPPLESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDAG--HKCPVDNEILLENQLFP 70 (118)
T ss_dssp SSCCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHHC--SBCTTTCCBCCGGGCEE
T ss_pred ccCCCCCCCCCcCChhhcC---eEECCcCChhhHHHHHHHHhhCC--CCCCCCCCCcCHHhccc
Confidence 3455677899999998865 89999999999999999876532 39999999998877654
No 29
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.79 E-value=1.5e-05 Score=56.26 Aligned_cols=46 Identities=13% Similarity=0.354 Sum_probs=37.1
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCC
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRT 336 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~ 336 (351)
...+.|||-.+.+.+ |+++||||+|++..|.++.....+..+||.|
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKE---PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSS---CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCc---cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 445678888877754 7899999999999999996543467899987
No 30
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.78 E-value=1.6e-05 Score=60.44 Aligned_cols=47 Identities=13% Similarity=0.206 Sum_probs=39.7
Q ss_pred CeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccC
Q 018698 289 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 341 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~ 341 (351)
..+.|||-.+.+.+ |+++||||+|+..+|.+|.+. ...||.|...+.
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQN---PVVTKCRHYFCESCALEHFRA---TPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCS---EEECTTSCEEEHHHHHHHHHH---CSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcC---eeEccCCCHhHHHHHHHHHHC---CCcCCCcCcccc
Confidence 34678888887754 899999999999999999864 468999999986
No 31
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=97.76 E-value=4.8e-05 Score=55.77 Aligned_cols=52 Identities=13% Similarity=0.258 Sum_probs=42.3
Q ss_pred CeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcC
Q 018698 289 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 343 (351)
....|+|-.+.+...++++.+||||+|...+|.+|.+.+ .+||.|...+...
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN---KKCPICRVDIEAQ 64 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC---SBCTTTCSBSCSC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC---CCCcCcCccccCc
Confidence 345677777777777789999999999999999998754 3699999887653
No 32
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.76 E-value=1.8e-05 Score=62.43 Aligned_cols=54 Identities=19% Similarity=0.317 Sum_probs=44.6
Q ss_pred CeeeeeccccccCCCCCceec-cCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 289 SKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~L-p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
..+.|||-.+.+.+ |+++ ||||+|+..+|.++... ..+||.|...+...++.+-
T Consensus 21 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~~l~~n 75 (99)
T 2y43_A 21 DLLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLSY---KTQCPTCCVTVTEPDLKNN 75 (99)
T ss_dssp HHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTT---CCBCTTTCCBCCGGGCEEC
T ss_pred CCCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHHC---CCCCCCCCCcCChhhCCcC
Confidence 45788888888765 8887 99999999999999753 4799999999998776653
No 33
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=97.75 E-value=1.8e-05 Score=67.78 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=39.3
Q ss_pred eeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcC
Q 018698 291 LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 291 ~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 343 (351)
+.|||-.+.+.+ |+.+||||+|+..+|.++... +.+.||.|...+...
T Consensus 79 ~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~--~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 79 FMCVCCQELVYQ---PVTTECFHNVCKDCLQRSFKA--QVFSCPACRHDLGQN 126 (150)
T ss_dssp TBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHHT--TCCBCTTTCCBCCTT
T ss_pred CEeecCChhhcC---CEEcCCCCchhHHHHHHHHHh--CCCcCCCCCccCCCC
Confidence 456666666544 899999999999999999864 457999999999877
No 34
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.73 E-value=1.8e-05 Score=66.56 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=33.5
Q ss_pred eeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 293 CYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 293 Cpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
|||-.+.+. .|+++||||+|+..+|.+|... ...||.|.+.+..
T Consensus 56 C~iC~~~~~---~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 56 CIICSEYFI---EAVTLNCAHSFCSYCINEWMKR---KIECPICRKDIKS 99 (138)
T ss_dssp CTTTCSBCS---SEEEETTSCEEEHHHHHHHTTT---CSBCTTTCCBCCC
T ss_pred CcccCcccC---CceECCCCCCccHHHHHHHHHc---CCcCCCCCCcCCC
Confidence 444444443 2899999999999999999643 4689999988754
No 35
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.70 E-value=7e-06 Score=60.92 Aligned_cols=52 Identities=15% Similarity=0.057 Sum_probs=41.0
Q ss_pred eeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 290 KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 290 ~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
.+.|+|-.+.+.+ |+++||||+|+..+|.+|... ..+||.|...+...++.+
T Consensus 15 ~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~~ 66 (71)
T 2d8t_A 15 VPECAICLQTCVH---PVSLPCKHVFCYLCVKGASWL---GKRCALCRQEIPEDFLDS 66 (71)
T ss_dssp CCBCSSSSSBCSS---EEEETTTEEEEHHHHHHCTTC---SSBCSSSCCBCCHHHHSC
T ss_pred CCCCccCCcccCC---CEEccCCCHHHHHHHHHHHHC---CCcCcCcCchhCHhhccC
Confidence 3567777666543 799999999999999998643 379999999998776654
No 36
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.70 E-value=1.4e-05 Score=60.08 Aligned_cols=57 Identities=16% Similarity=0.199 Sum_probs=46.6
Q ss_pred CCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 018698 287 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 346 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 346 (351)
....+.|+|-.+.+......+++||||+|...+|.+|.+. ..+||.|...+...+..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~ 68 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ---HDSCPVCRKSLTGQNTA 68 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT---TCSCTTTCCCCCCSCSC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc---CCcCcCcCCccCCcccC
Confidence 3455678888888877777888999999999999999753 36999999999877654
No 37
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.67 E-value=2.7e-05 Score=63.18 Aligned_cols=55 Identities=16% Similarity=0.279 Sum_probs=46.0
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
...+.|||-.+.+.+ |+.+||||+|+..+|.++.... ...||.|...+...++.+
T Consensus 21 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~~~~ 75 (116)
T 1rmd_A 21 VKSISCQICEHILAD---PVETSCKHLFCRICILRCLKVM--GSYCPSCRYPCFPTDLES 75 (116)
T ss_dssp HHHTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHT--CSBCTTTCCBCCGGGCBC
T ss_pred cCCCCCCCCCcHhcC---cEEcCCCCcccHHHHHHHHhHC--cCcCCCCCCCCCHhhccc
Confidence 346789999888865 8999999999999999998653 368999999999877654
No 38
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.62 E-value=3.7e-05 Score=61.66 Aligned_cols=49 Identities=8% Similarity=0.198 Sum_probs=40.4
Q ss_pred CeeeeeccccccCCCCCceec-cCCccchHHHHHHHHHhCCCceecCCCCcccCcC
Q 018698 289 SKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~L-p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 343 (351)
.-+.|||-.+.+.+ |+.+ ||||+|+..+|.++... ...||.|+..+...
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFID---ATTIIECLHSFCKTCIVRYLET---SKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHTS---CSBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhC---cCEeCCCCChhhHHHHHHHHHh---CCcCcCCCcccccc
Confidence 45678888777764 8887 99999999999999753 37999999998865
No 39
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=97.56 E-value=5.1e-05 Score=59.14 Aligned_cols=51 Identities=16% Similarity=0.175 Sum_probs=43.0
Q ss_pred CeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 289 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
.-..|+|-.+.+.+.+.++.+||||+|...+|.+|.+. ...||.|...+..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~---~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK---SGTCPVCRCMFPP 89 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT---TCBCTTTCCBSSC
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc---CCcCcCcCccCCC
Confidence 45678888888888888999999999999999999754 3589999988753
No 40
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.55 E-value=3.5e-05 Score=63.23 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=46.0
Q ss_pred eeeeeccccccCC----CCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceeeec
Q 018698 290 KLVCYITKELMDT----ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 290 ~~vCpis~e~~~e----~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
.+.|||-.+.+++ ...+++++|||+|..+.|.+|.+. ...||.|++.+...++.++|+
T Consensus 7 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~~~l~~l~i 68 (133)
T 4ap4_A 7 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKKINHKRYHPIYI 68 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTT---CSBCTTTCCBCTTTCEEECBC
T ss_pred CCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHh---CCCCCCCCCcCcccccccccc
Confidence 4556666666543 244589999999999999999753 359999999999999998876
No 41
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.55 E-value=5.9e-05 Score=65.07 Aligned_cols=52 Identities=15% Similarity=0.259 Sum_probs=42.8
Q ss_pred CCCeeeeeccccccCCCCCceec-cCCccchHHHHHHHHHhCCCceecCCCCcccCcC
Q 018698 287 HHSKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~NpP~~L-p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 343 (351)
....+.|||-.+.+.+ |+.+ ||||+|+..+|.+|... +...||.|...+...
T Consensus 51 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~--~~~~CP~Cr~~~~~~ 103 (165)
T 2ckl_B 51 LHSELMCPICLDMLKN---TMTTKECLHRFCADCIITALRS--GNKECPTCRKKLVSK 103 (165)
T ss_dssp CHHHHBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHHT--TCCBCTTTCCBCCSG
T ss_pred CCCCCCCcccChHhhC---cCEeCCCCChhHHHHHHHHHHh--CcCCCCCCCCcCCCc
Confidence 4566889999888875 7776 99999999999999863 357899999998543
No 42
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.52 E-value=5.5e-05 Score=55.07 Aligned_cols=49 Identities=20% Similarity=0.251 Sum_probs=36.4
Q ss_pred eeeeccccccCC----CCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 291 LVCYITKELMDT----ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 291 ~vCpis~e~~~e----~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
+.|+|-.+.+.+ .+.+++++|||+|...+|.+|.+. ...||.|...+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 16 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKKINH 68 (69)
T ss_dssp CCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH---CSSCTTTCCCCCC
T ss_pred CCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc---CCCCCCCCCccCc
Confidence 445554444422 355689999999999999999865 3599999988753
No 43
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.48 E-value=2.3e-05 Score=63.55 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=40.5
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
..-|.|||-.+.+.+ |+++||||+|+..+|.++.. .+...||.|...+..
T Consensus 13 ~~~~~C~iC~~~~~~---p~~~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVE---PVTLPCNHTLCKPCFQSTVE--KASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSS---CEECTTSCEECHHHHCCCCC--TTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCc---eeEcCCCCHHhHHHHHHHHh--HCcCCCCCCCcccCc
Confidence 345778888877764 89999999999999998863 346899999998864
No 44
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=97.44 E-value=5.1e-05 Score=52.99 Aligned_cols=49 Identities=16% Similarity=0.333 Sum_probs=39.4
Q ss_pred eeeeeccccccCCCCCceecc-CCccchHHHHHHHHHhCCCceecCCCCcccC
Q 018698 290 KLVCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKNNGKITCPRTGLVCN 341 (351)
Q Consensus 290 ~~vCpis~e~~~e~NpP~~Lp-~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~ 341 (351)
...|+|-.+.+.+.+.++.+| |||+|....|.+|.++ ...||.|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~---~~~CP~Cr~~~~ 54 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS---HSTCPLCRLTVV 54 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT---CCSCSSSCCCSC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc---CCcCcCCCCEeE
Confidence 346777777777777788898 9999999999999753 468999998764
No 45
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.44 E-value=6.3e-05 Score=56.18 Aligned_cols=53 Identities=21% Similarity=0.316 Sum_probs=43.3
Q ss_pred CCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcC
Q 018698 288 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 288 hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 343 (351)
.....|+|-.+.+.+.+..+.+||||+|...+|.+|.+.+ .+||.|...+..+
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~---~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN---RTCPICRADSGPS 73 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHC---SSCTTTCCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcC---CcCcCcCCcCCCC
Confidence 3456788888887776777889999999999999998754 4899999887654
No 46
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.39 E-value=0.00015 Score=53.79 Aligned_cols=49 Identities=14% Similarity=0.227 Sum_probs=38.5
Q ss_pred eeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 291 LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 291 ~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
..|+|-.+.+.+....+++||||+|...+|.+|.+.. .+||.|...+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~---~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 16 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR---KVCPLCNMPVLQ 64 (74)
T ss_dssp CBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC---SBCTTTCCBCSS
T ss_pred CCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC---CcCCCcCccccc
Confidence 4566666666666667778999999999999998754 389999988753
No 47
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=97.39 E-value=8.3e-05 Score=64.38 Aligned_cols=58 Identities=16% Similarity=0.200 Sum_probs=48.2
Q ss_pred CCCCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 285 KQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 285 ~~~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
-.....|.|||-.+.+.+ |+.+||||+|++.+|.++.+.+ ..+||.|...+..+++.+
T Consensus 13 ~~~~~~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~~~~ 70 (170)
T 3hcs_A 13 PPLESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDA--GHKCPVDNEILLENQLFP 70 (170)
T ss_dssp SCCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHH--CSBCTTTCCBCCGGGCEE
T ss_pred cCCCCCCCCCCCChhhcC---cEECCCCCHHHHHHHHHHHHhC--CCCCCCCccCcchhhhhh
Confidence 345677899999999875 8999999999999999987643 249999999998877654
No 48
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=97.37 E-value=9.1e-05 Score=54.01 Aligned_cols=45 Identities=22% Similarity=0.270 Sum_probs=34.7
Q ss_pred eeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccC
Q 018698 292 VCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 341 (351)
Q Consensus 292 vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~ 341 (351)
.|||-.+.+ .+|++.+||||+|...++.+|.+++ ..||.|...+.
T Consensus 7 ~C~IC~~~~--~~~~~~~~C~H~fc~~Ci~~~~~~~---~~CP~Cr~~~~ 51 (68)
T 1chc_A 7 RCPICLEDP--SNYSMALPCLHAFCYVCITRWIRQN---PTCPLCKVPVE 51 (68)
T ss_dssp CCSSCCSCC--CSCEEETTTTEEESTTHHHHHHHHS---CSTTTTCCCCC
T ss_pred CCeeCCccc--cCCcEecCCCCeeHHHHHHHHHhCc---CcCcCCChhhH
Confidence 344444443 3567999999999999999998653 59999998875
No 49
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.37 E-value=1.6e-05 Score=64.91 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=41.6
Q ss_pred CeeeeeccccccCCCCCceec-cCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 289 SKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~L-p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
..+.|||-.+.+.+ |+++ ||||+|+..+|.++.. ..||.|...+...++..
T Consensus 21 ~~~~C~IC~~~~~~---pv~~~~CgH~fC~~Ci~~~~~-----~~CP~Cr~~~~~~~~~~ 72 (117)
T 1jm7_B 21 KLLRCSRCTNILRE---PVCLGGCEHIFCSNCVSDCIG-----TGCPVCYTPAWIQDLKI 72 (117)
T ss_dssp HTTSCSSSCSCCSS---CBCCCSSSCCBCTTTGGGGTT-----TBCSSSCCBCSCSSCCC
T ss_pred hCCCCCCCChHhhC---ccEeCCCCCHHHHHHHHHHhc-----CCCcCCCCcCccccccc
Confidence 45678887777754 8888 9999999999998853 78999999998776654
No 50
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=97.33 E-value=7e-05 Score=56.18 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=37.0
Q ss_pred eeeeccccccCCCCCceeccCCcc-chHHHHHHHHHhCCCceecCCCCcccCcCCceeeecC
Q 018698 291 LVCYITKELMDTENPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 351 (351)
Q Consensus 291 ~vCpis~e~~~e~NpP~~Lp~GhV-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 351 (351)
+.|+|=.+... .|+.+||||+ ++..++.++ .+||.|.+.+. ...+||++
T Consensus 25 ~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~--~~~~i~~S 74 (74)
T 4ic3_A 25 KLCKICMDRNI---AIVFVPCGHLVTCKQCAEAV-------DKCPMCYTVIT--FKQKILMS 74 (74)
T ss_dssp TBCTTTSSSBC---CEEEETTCCBCCCHHHHTTC-------SBCTTTCCBCS--EEEECBC-
T ss_pred CCCCCCCCCCC---CEEEcCCCChhHHHHhhhcC-------ccCCCcCcCcc--CcEEEeeC
Confidence 34555544433 3889999999 999999876 69999999875 56888875
No 51
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.26 E-value=0.00012 Score=54.85 Aligned_cols=49 Identities=20% Similarity=0.246 Sum_probs=37.2
Q ss_pred eeeeccccccCCCCCceeccCCcc-chHHHHHHHHHhCCCceecCCCCcccCcCCceeeecC
Q 018698 291 LVCYITKELMDTENPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 351 (351)
Q Consensus 291 ~vCpis~e~~~e~NpP~~Lp~GhV-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 351 (351)
+.|+|-.+.. ..|+.+||||+ ++..++.++ .+||.|.+.+. ...+||++
T Consensus 26 ~~C~IC~~~~---~~~~~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~--~~~~i~~S 75 (75)
T 2ecg_A 26 KLCKICMDRN---IAIVFVPCGHLVTCKQCAEAV-------DKCPMCYTVIT--FKQKIFMS 75 (75)
T ss_dssp HSCSSSCSSC---CCBCCSSSCCCCBCHHHHHHC-------SBCTTTCCBCC--CCCBCCCC
T ss_pred CCCCcCCCCC---CCEEEecCCCHHHHHHHhhCC-------CCCccCCceec--CcEEEecC
Confidence 4566655443 34889999999 999999653 68999999875 46788874
No 52
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.17 E-value=4.6e-05 Score=54.03 Aligned_cols=46 Identities=20% Similarity=0.284 Sum_probs=35.9
Q ss_pred eeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCC
Q 018698 290 KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 290 ~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 344 (351)
.+.|+|-.+.+.+ |++|||||+|+...|.+ ...+||.|...+...+
T Consensus 6 ~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~------~~~~CP~Cr~~~~~~~ 51 (56)
T 1bor_A 6 FLRCQQCQAEAKC---PKLLPCLHTLCSGCLEA------SGMQCPICQAPWPLGA 51 (56)
T ss_dssp CSSCSSSCSSCBC---CSCSTTSCCSBTTTCSS------SSSSCSSCCSSSSCCS
T ss_pred CCCceEeCCccCC---eEEcCCCCcccHHHHcc------CCCCCCcCCcEeecCC
Confidence 3557776666553 79999999999999866 3579999999987654
No 53
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.10 E-value=7.5e-05 Score=54.85 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=40.1
Q ss_pred CeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 289 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
..+.|+|-.+.+.+ +.+||||+|+..+|.+|.+ ....||.|...+...+..-
T Consensus 14 ~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~---~~~~CP~Cr~~~~~~~~~~ 65 (70)
T 2ecn_A 14 DEEECCICMDGRAD----LILPCAHSFCQKCIDKWSD---RHRNCPICRLQMTGANESS 65 (70)
T ss_dssp CCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSC---CCSSCHHHHHCTTCCCCCC
T ss_pred CCCCCeeCCcCccC----cccCCCCcccHHHHHHHHH---CcCcCCCcCCcccCCCccc
Confidence 44567776666554 8899999999999999864 4679999999888665443
No 54
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.06 E-value=0.00022 Score=54.30 Aligned_cols=51 Identities=14% Similarity=0.103 Sum_probs=39.0
Q ss_pred eeccccccCCCCCceecc-CCccchHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 018698 293 CYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 346 (351)
Q Consensus 293 Cpis~e~~~e~NpP~~Lp-~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 346 (351)
|+|-.+....++-++++| |||+|...+|.++.+.+ -.||.|...+...++-
T Consensus 29 C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~---~~CP~CR~~~~~~~~g 80 (81)
T 2ecl_A 29 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN---NRCPLCQQDWVVQRIG 80 (81)
T ss_dssp CTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC---CBCTTTCCBCCEEEEE
T ss_pred CcccccccCCCceEEEeCCCCCccChHHHHHHHHhC---CCCCCcCCCcchhhcC
Confidence 666666655556566665 99999999999997543 4999999998876543
No 55
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=97.05 E-value=0.00053 Score=55.12 Aligned_cols=36 Identities=14% Similarity=0.263 Sum_probs=30.2
Q ss_pred eccCCccchHHHHHHHHHhC--CCceecCCCCcccCcC
Q 018698 308 VLPNGYVYSTKALEEMAKKN--NGKITCPRTGLVCNYS 343 (351)
Q Consensus 308 ~Lp~GhV~s~~al~~l~~~~--~~~~~CP~~~~~~~~~ 343 (351)
++||||+|...+|.+|...+ .....||.|...|...
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 78999999999999998643 3468999999988643
No 56
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.01 E-value=0.00065 Score=51.63 Aligned_cols=54 Identities=13% Similarity=0.230 Sum_probs=39.6
Q ss_pred eeeeeccccccCCCCCceec--cCCccchHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 018698 290 KLVCYITKELMDTENPPQVL--PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 346 (351)
Q Consensus 290 ~~vCpis~e~~~e~NpP~~L--p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 346 (351)
-+.|||=-+.++..+ +..+ +|||.++..++.++.. ++...||.|.+.+....+.
T Consensus 11 ~~~CpICle~~~~~d-~~~~p~~CGH~fC~~Cl~~~~~--~~~~~CP~CR~~~~~~~~~ 66 (78)
T 1e4u_A 11 PVECPLCMEPLEIDD-INFFPCTCGYQICRFCWHRIRT--DENGLCPACRKPYPEDPAV 66 (78)
T ss_dssp CCBCTTTCCBCCTTT-TTCCSSTTSCCCCHHHHHHHTT--SSCSBCTTTCCBCSSCSSC
T ss_pred CCcCCccCccCcccc-ccccccCCCCCcCHHHHHHHHh--cCCCCCCCCCCccCCCchh
Confidence 456777777665433 3444 4999999999999853 3568999999999876653
No 57
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=96.99 E-value=0.0004 Score=74.89 Aligned_cols=53 Identities=13% Similarity=0.222 Sum_probs=46.3
Q ss_pred CeeeeeccccccCCCCCceeccCC-ccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 289 SKLVCYITKELMDTENPPQVLPNG-YVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 289 S~~vCpis~e~~~e~NpP~~Lp~G-hV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
+-|.||||+++|.+ ||++|.| +.|.+.+|++|... + -+||.|++..+.+++..
T Consensus 890 ~~F~cPIs~~lM~D---PVilpsG~~TydR~~I~~wl~~-~--~tdP~Tr~~L~~~~liP 943 (968)
T 3m62_A 890 DEFLDPLMYTIMKD---PVILPASKMNIDRSTIKAHLLS-D--STDPFNRMPLKLEDVTP 943 (968)
T ss_dssp GGGBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTT-C--CBCTTTCCBCCGGGCEE
T ss_pred HHhCCcchhhHHhC---CeEcCCCCEEECHHHHHHHHhc-C--CCCCCCCCCCCcccccc
Confidence 57899999999999 9999998 68999999999864 2 38999999998887654
No 58
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=96.92 E-value=0.00017 Score=61.07 Aligned_cols=52 Identities=17% Similarity=0.311 Sum_probs=42.8
Q ss_pred CCCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 286 QHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 286 ~~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
.....|.|||-.+.+.+ |+.++|||+|++.+|.++.+. +..+||.|......
T Consensus 27 ~l~~~~~C~IC~~~~~~---pv~~~CgH~FC~~Ci~~~~~~--~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 27 KLEAKYLCSACRNVLRR---PFQAQCGHRYCSFCLASILSS--GPQNCAACVHEGIY 78 (141)
T ss_dssp GCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHGGG--SCEECHHHHHTTCC
T ss_pred cCCcCcCCCCCChhhcC---cEECCCCCccCHHHHHHHHhc--CCCCCCCCCCcccc
Confidence 34577899999998876 899999999999999999753 45799999886543
No 59
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=96.82 E-value=0.00092 Score=48.46 Aligned_cols=41 Identities=15% Similarity=0.314 Sum_probs=33.7
Q ss_pred ceec--cCCcc-chHHHHHHHHHhCCCceecCCCCcccCcCCceeeecC
Q 018698 306 PQVL--PNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 351 (351)
Q Consensus 306 P~~L--p~GhV-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 351 (351)
++++ ||||+ ++.+.+.++.+.+ .+||.|.+.+ .++.+||++
T Consensus 20 ~~~~~~pCgH~~~C~~C~~~~~~~~---~~CPiCR~~i--~~~i~i~~s 63 (63)
T 2vje_B 20 GNIIHGRTGHLVTCFHCARRLKKAG---ASCPICKKEI--QLVIKVFIA 63 (63)
T ss_dssp EEEEETTEEEEEECHHHHHHHHHTT---CBCTTTCCBC--CEEEEEEEC
T ss_pred eEEEecCCCCHhHHHHHHHHHHHhC---CcCCCcCchh--hceEEEecC
Confidence 5556 99998 9999999986542 6899999987 578999874
No 60
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=96.67 E-value=0.0015 Score=47.40 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=33.3
Q ss_pred ceec--cCCcc-chHHHHHHHHHhCCCceecCCCCcccCcCCceeeecC
Q 018698 306 PQVL--PNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 351 (351)
Q Consensus 306 P~~L--p~GhV-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 351 (351)
++.+ ||||+ ++.+.+.++.+. ..+||.|.+.+ .++.++|+.
T Consensus 21 ~~~~~~pCgH~~~C~~C~~~~~~~---~~~CPiCR~~i--~~~i~i~~~ 64 (64)
T 2vje_A 21 GCIVHGKTGHLMACFTCAKKLKKR---NKPCPVCRQPI--QMIVLTYFP 64 (64)
T ss_dssp EEEEETTEEEEEECHHHHHHHHHT---TCCCTTTCCCC--CEEEEEECC
T ss_pred EEEECCCCCChhhHHHHHHHHHHc---CCcCCCcCcch--hceEeeecC
Confidence 4555 99999 799999999753 24899999987 578999974
No 61
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=96.62 E-value=0.00091 Score=65.62 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=42.0
Q ss_pred eeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 018698 291 LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 291 ~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 347 (351)
..|+|-.+.+. .|+.+||||+++..++.+|... +...||.|...+...+...
T Consensus 333 ~~C~ICle~~~---~pv~lpCGH~FC~~Ci~~wl~~--~~~~CP~CR~~i~~~~~i~ 384 (389)
T 2y1n_A 333 QLCKICAENDK---DVKIEPCGHLMCTSCLTSWQES--EGQGCPFCRCEIKGTEPIV 384 (389)
T ss_dssp SBCTTTSSSBC---CEEEETTCCEECHHHHHHHHHH--TCSBCTTTCCBCCEEEECS
T ss_pred CCCCccCcCCC---CeEEeCCCChhhHHHHHHHHhc--CCCCCCCCCCccCCceeEe
Confidence 68999876664 4899999999999999999763 3468999999988765443
No 62
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=96.37 E-value=0.0019 Score=52.00 Aligned_cols=42 Identities=10% Similarity=0.129 Sum_probs=33.3
Q ss_pred CCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCc
Q 018698 301 DTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDL 345 (351)
Q Consensus 301 ~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~ 345 (351)
.++.+.+.+||||+|...+|.+|.+. ...||.|...|.+.+.
T Consensus 63 ~~~~~~~~~~C~H~FH~~Ci~~Wl~~---~~~CP~Cr~~~~~~~~ 104 (106)
T 3dpl_R 63 SEECTVAWGVCNHAFHFHCISRWLKT---RQVCPLDNREWEFQKY 104 (106)
T ss_dssp --CCCEEEETTSCEEEHHHHHHHHTT---CSBCSSSCSBCCEEEC
T ss_pred CccceEeecccCcEECHHHHHHHHHc---CCcCcCCCCcceeecC
Confidence 34556778999999999999999754 4789999999876543
No 63
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.35 E-value=0.00059 Score=53.21 Aligned_cols=58 Identities=12% Similarity=0.185 Sum_probs=37.8
Q ss_pred eeeeeccccccCCCCCceeccCCccchHHHHHHHHHh---CC--CceecCC--CCcc--cCcCCcee
Q 018698 290 KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKK---NN--GKITCPR--TGLV--CNYSDLVK 347 (351)
Q Consensus 290 ~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~---~~--~~~~CP~--~~~~--~~~~~~~k 347 (351)
.+.|+|=-+.....+...+.+|||+|++++|.+.... .+ ..++||. |+.. +..+++++
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~ 71 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIEC 71 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHH
Confidence 3456666555443222222489999999999987653 12 3589999 9998 66655543
No 64
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=95.96 E-value=0.0025 Score=48.35 Aligned_cols=37 Identities=14% Similarity=0.300 Sum_probs=30.4
Q ss_pred CceeccCCcc-chHHHHHHHHHhCCCceecCCCCcccCcCCceeeec
Q 018698 305 PPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 305 pP~~Lp~GhV-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
.|+.+||||+ ++..++.++ ..||.|...+.. ..++|+
T Consensus 30 ~~v~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~~--~~~i~~ 67 (79)
T 2yho_A 30 NSTFCPCGHTVCCESCAAQL-------QSCPVCRSRVEH--VQHVYL 67 (79)
T ss_dssp CEEEETTCBCCBCHHHHTTC-------SBCTTTCCBCCE--EEECBC
T ss_pred cEEEECCCCHHHHHHHHHhc-------CcCCCCCchhhC--eEEEEe
Confidence 3788999999 999999766 399999998765 577775
No 65
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.95 E-value=0.0042 Score=47.36 Aligned_cols=52 Identities=17% Similarity=0.209 Sum_probs=39.3
Q ss_pred eeeccccccCCCCCceeccCC-----ccchHHHHHHHHHhCCCceecCCCCcccCcCCc
Q 018698 292 VCYITKELMDTENPPQVLPNG-----YVYSTKALEEMAKKNNGKITCPRTGLVCNYSDL 345 (351)
Q Consensus 292 vCpis~e~~~e~NpP~~Lp~G-----hV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~ 345 (351)
.|+|=.+..++++ |+++||+ |.|-.++|.+|.... +...||.|...|....-
T Consensus 17 ~C~IC~~~~~~~~-~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~-~~~~CplCr~~~~~~~~ 73 (80)
T 2d8s_A 17 ICRICHCEGDDES-PLITPCHCTGSLHFVHQACLQQWIKSS-DTRCCELCKYEFIMETK 73 (80)
T ss_dssp CCSSSCCCCCSSS-CEECSSSCCSSSCCEETTHHHHHHHHH-CCSBCSSSCCBCCCCCC
T ss_pred CCeEcCccccCCC-eeEeccccCCcCCeeCHHHHHHHHhhC-CCCCCCCCCCeeecCcc
Confidence 4555555444555 5789996 999999999998653 45799999999987653
No 66
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=95.77 E-value=0.0017 Score=62.84 Aligned_cols=49 Identities=14% Similarity=0.308 Sum_probs=35.7
Q ss_pred eeeeccccccCCCCCceeccCCcc-chHHHHHHHHHhCCCceecCCCCcccCcCCceeeecC
Q 018698 291 LVCYITKELMDTENPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 351 (351)
Q Consensus 291 ~vCpis~e~~~e~NpP~~Lp~GhV-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 351 (351)
+.|+|-.+... .|+.+||||+ ++..++.++ .+||.|...+. ...+||++
T Consensus 296 ~~C~IC~~~~~---~~v~lpCgH~~fC~~C~~~~-------~~CP~CR~~i~--~~~~i~~s 345 (345)
T 3t6p_A 296 RTCKVCMDKEV---SVVFIPCGHLVVCQECAPSL-------RKCPICRGIIK--GTVRTFLS 345 (345)
T ss_dssp CBCTTTSSSBC---CEEEETTCCEEECTTTGGGC-------SBCTTTCCBCC--EEEECC--
T ss_pred CCCCccCCcCC---ceEEcCCCChhHhHHHHhcC-------CcCCCCCCCcc--CeEEeecC
Confidence 34544444443 3889999999 999999876 58999999875 56788864
No 67
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=95.10 E-value=0.0037 Score=51.24 Aligned_cols=40 Identities=10% Similarity=0.132 Sum_probs=0.0
Q ss_pred CCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCc
Q 018698 303 ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDL 345 (351)
Q Consensus 303 ~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~ 345 (351)
+-+.+.+||||+|...+|.+|.+. +..||.|...|.+...
T Consensus 76 ~~~v~~~~C~H~FH~~CI~~Wl~~---~~~CP~Cr~~~~~~k~ 115 (117)
T 4a0k_B 76 ECTVAWGVCNHAFHFHCISRWLKT---RQVCPLDNREWEFQKY 115 (117)
T ss_dssp -------------------------------------------
T ss_pred ccccccCCcCceEcHHHHHHHHHc---CCcCCCCCCeeeeecc
Confidence 344555899999999999999764 4689999999876543
No 68
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.70 E-value=0.015 Score=42.68 Aligned_cols=38 Identities=11% Similarity=0.009 Sum_probs=29.8
Q ss_pred CCceeccCCcc-chHHHHHHHHHhCCCceecCCCCcccCcCCceeeec
Q 018698 304 NPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 350 (351)
Q Consensus 304 NpP~~Lp~GhV-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 350 (351)
-.++.+||||+ ++...+.++ .+||+|...+.. ..+||.
T Consensus 26 ~~~v~~pCgH~~~C~~C~~~~-------~~CP~CR~~i~~--~~~i~~ 64 (68)
T 2ea5_A 26 VNWVLLPCRHTCLCDGCVKYF-------QQCPMCRQFVQE--SFALSG 64 (68)
T ss_dssp CCCEETTTTBCCSCTTHHHHC-------SSCTTTCCCCCC--EECCCS
T ss_pred CCEEEECCCChhhhHHHHhcC-------CCCCCCCcchhc--eEEeec
Confidence 34888999999 999999753 589999996654 666663
No 69
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.48 E-value=0.06 Score=52.29 Aligned_cols=52 Identities=15% Similarity=0.207 Sum_probs=44.6
Q ss_pred eeeeccccccCCCCCcee-ccCCcc--chHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 018698 291 LVCYITKELMDTENPPQV-LPNGYV--YSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 346 (351)
Q Consensus 291 ~vCpis~e~~~e~NpP~~-Lp~GhV--~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 346 (351)
|.||+|+..|.. |+. ..|-|+ |..+++..+..+ .++.+||+|++.+..+++.
T Consensus 250 L~CPlS~~ri~~---PvRg~~C~HlQCFDl~sfL~~~~~-~~~W~CPIC~k~~~~~dL~ 304 (371)
T 3i2d_A 250 LQCPISYTRMKY---PSKSINCKHLQCFDALWFLHSQLQ-IPTWQCPVCQIDIALENLA 304 (371)
T ss_dssp SBCTTTSSBCSS---EEEETTCCSSCCEEHHHHHHHHHH-SCCCBCTTTCCBCCGGGEE
T ss_pred ecCCCccccccc---cCcCCcCCCcceECHHHHHHHhhc-CCceeCCCCCcccCHHHee
Confidence 789999999876 777 789998 999999998754 5789999999999887754
No 70
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=92.36 E-value=0.11 Score=50.32 Aligned_cols=53 Identities=19% Similarity=0.355 Sum_probs=45.2
Q ss_pred eeeeeccccccCCCCCcee-ccCCcc--chHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 018698 290 KLVCYITKELMDTENPPQV-LPNGYV--YSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 346 (351)
Q Consensus 290 ~~vCpis~e~~~e~NpP~~-Lp~GhV--~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 346 (351)
.|.||+|+..|.- |+. ..|-|+ |...++..+..+ .++.+||+|++.+..+++.
T Consensus 215 SL~CPlS~~ri~~---P~Rg~~C~HlqCFDl~sfL~~~~~-~~~W~CPiC~k~~~~~dL~ 270 (360)
T 4fo9_A 215 SLMCPLGKMRLTI---PCRAVTCTHLQCFDAALYLQMNEK-KPTWICPVCDKKAAYESLI 270 (360)
T ss_dssp ESBCTTTCSBCSS---EEEETTCCCCCCEEHHHHHHHHHH-SCCCBCTTTCSBCCGGGEE
T ss_pred eeeCCCccceecc---CCcCCCCCCCccCCHHHHHHHHhh-CCCeECCCCCcccCHHHeE
Confidence 3689999999966 777 799998 999999999765 5689999999999887754
No 71
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=91.66 E-value=0.0079 Score=45.77 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=30.7
Q ss_pred CCCCCeeeeeccccccCCC---CCceeccCCccch--HHHHHHHHHhCCCceecCCCCccc-----CcCCceeee
Q 018698 285 KQHHSKLVCYITKELMDTE---NPPQVLPNGYVYS--TKALEEMAKKNNGKITCPRTGLVC-----NYSDLVKAY 349 (351)
Q Consensus 285 ~~~hS~~vCpis~e~~~e~---NpP~~Lp~GhV~s--~~al~~l~~~~~~~~~CP~~~~~~-----~~~~~~kvy 349 (351)
||.|-.--|||-|+..+=. +.-+.+-|+.-+= ++...+- -.+-.|+||.||++| ..+++.|||
T Consensus 3 ~~~~~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~--~e~F~FkCP~CgEEFyG~~Lp~~EaeKVF 75 (95)
T 2k5c_A 3 HHHHHMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQ--VEEFVFKCPVCGEEFYGKTLPRREAEKVF 75 (95)
T ss_dssp -----CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHH--HHHSEEECTTTCCEEETTSSCTTTHHHHH
T ss_pred ccccccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHH--HHHHhhcCCCccHHHhcccCChHHHHHHH
Confidence 4455556677777665411 1111133333322 2232221 123479999999987 456666665
No 72
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=89.35 E-value=0.27 Score=38.94 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=28.1
Q ss_pred ceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 306 PQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 306 P~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
.-|+||+||++.++...+.+++ .-.||.|...+..
T Consensus 15 gRmIPCkHvFCydCa~~~~~~~--~k~Cp~C~~~V~r 49 (101)
T 3vk6_A 15 GRMIPCKHVFCYDCAILHEKKG--DKMCPGCSDPVQR 49 (101)
T ss_dssp EEEETTCCEEEHHHHHHHHHTT--CCBCTTTCCBCSE
T ss_pred eeeccccccHHHHHHHHHHhcc--CCCCcCcCCeeee
Confidence 3578999999999999997653 3589999887653
No 73
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=88.45 E-value=0.39 Score=34.18 Aligned_cols=47 Identities=21% Similarity=0.349 Sum_probs=34.4
Q ss_pred eeeccccccCCCCCceeccCCc-----cchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 292 VCYITKELMDTENPPQVLPNGY-----VYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 292 vCpis~e~~~e~NpP~~Lp~Gh-----V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
+|+|=.+.. +.|+++||.. .+-...|.+|.... +...||.|+..|..
T Consensus 8 ~CrIC~~~~---~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~-~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 8 VCWICNEEL---GNERFRACGCTGELENVHRSCLSTWLTIS-RNTACQICGVVYNT 59 (60)
T ss_dssp EETTTTEEC---SCCCCCSCCCSSGGGSCCHHHHHHHHHHH-TCSBCTTTCCBCCC
T ss_pred EeEEeecCC---CCceecCcCCCCchhhhHHHHHHHHHHhC-CCCccCCCCCeeec
Confidence 466655542 3367899764 88999999997542 35799999999875
No 74
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=87.19 E-value=0.028 Score=38.21 Aligned_cols=26 Identities=15% Similarity=0.292 Sum_probs=21.1
Q ss_pred ccCCccchHHHHHHHHHhCCCceecCCCCcc
Q 018698 309 LPNGYVYSTKALEEMAKKNNGKITCPRTGLV 339 (351)
Q Consensus 309 Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~ 339 (351)
+-||++++.+-|+.| ..++|||||-.
T Consensus 7 ~rCg~~fs~~el~~l-----P~IrCpyCGyr 32 (48)
T 4ayb_P 7 GKCWKTFTDEQLKVL-----PGVRCPYCGYK 32 (48)
T ss_dssp CCTTTTCCCCCSCCC-----SSSCCTTTCCS
T ss_pred eccCCCccHHHHhhC-----CCcccCccCcE
Confidence 789999998887666 35899999964
No 75
>2nxp_A Transcription initiation factor TFIID subunit 5; transcription factor, TAF5; 2.17A {Homo sapiens} SCOP: d.379.1.1
Probab=81.17 E-value=2.2 Score=36.11 Aligned_cols=63 Identities=14% Similarity=0.207 Sum_probs=51.8
Q ss_pred HHHHHHHhh----hhHhhhCCCcchhhchhHHHHHHHhcCChHHHHHHHHHhCccchhhhHHHHHHHHHHh
Q 018698 133 PALAWCSDN----KSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATL 199 (351)
Q Consensus 133 ~AL~W~~en----k~~L~k~~S~LEF~Lr~q~fIeLir~~~~~eAI~yark~l~~~~~~~~~ei~~~m~lL 199 (351)
.-..|+... |++| +.|-|=+-+.=|++||..|...+|-.|.+++-+-+...|.++|+++.+..
T Consensus 33 ~L~~wv~~sld~yk~EL----~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~~~~~i~~L~~i~ 99 (156)
T 2nxp_A 33 GLKHFIECSLDCHRAEL----SQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLT 99 (156)
T ss_dssp HHHHHHHTSCHHHHHHH----GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCGGGHHHHHHHHTCC
T ss_pred HHHHHHHhCcHHHHHHH----HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhHHhHHHHHHHHHHHhcCC
Confidence 345677654 5666 46789999999999999999999999999988888888999999987643
No 76
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.01 E-value=0.4 Score=34.34 Aligned_cols=46 Identities=17% Similarity=0.169 Sum_probs=37.7
Q ss_pred CCCCCCchhhhcccCCCCCCCCCCC---------eeeeeccccccCCCCCceeccCC
Q 018698 265 KEDPLSQESFRKLASPLPYSKQHHS---------KLVCYITKELMDTENPPQVLPNG 312 (351)
Q Consensus 265 ~~cP~c~~~~~~l~~~LP~~~~~hS---------~~vCpis~e~~~e~NpP~~Lp~G 312 (351)
..||+|...+.. .-+|-.|.||. ...||+-+..+...+...++|.|
T Consensus 16 ~~C~IC~~~~~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~~G 70 (70)
T 2ecn_A 16 EECCICMDGRAD--LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANESSGPSSG 70 (70)
T ss_dssp CCCSSSCCSCCS--EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCCCCCCCCC
T ss_pred CCCeeCCcCccC--cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCccccCCCC
Confidence 469999888766 67888887763 46799999999999988888887
No 77
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=75.13 E-value=1.2 Score=32.71 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=26.1
Q ss_pred CCCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 286 QHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 286 ~~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
..-.+++||+++....-+. ..+...||.|+..|...|=..|
T Consensus 4 ~LL~iL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dGIPv 44 (68)
T 2jr6_A 4 KFLDILVCPVTKGRLEYHQ----------------------DKQELWSRQAKLAYPIKDGIPY 44 (68)
T ss_dssp SSSCCCBCSSSCCBCEEET----------------------TTTEEEETTTTEEEEEETTEEC
T ss_pred HHhhheECCCCCCcCeEeC----------------------CCCEEEcCCCCcEecCCCCeee
Confidence 3456788888875443211 1367788888888887765544
No 78
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=75.04 E-value=1 Score=32.99 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=27.7
Q ss_pred CCCCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 285 KQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 285 ~~~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
...-.+++||+++....-+. .++...||.|+..|...|=..|
T Consensus 5 ~~LLeiL~CP~ck~~L~~~~----------------------~~g~LvC~~c~~~YPI~dGIPv 46 (67)
T 2jny_A 5 PQLLEVLACPKDKGPLRYLE----------------------SEQLLVNERLNLAYRIDDGIPV 46 (67)
T ss_dssp GGGTCCCBCTTTCCBCEEET----------------------TTTEEEETTTTEEEEEETTEEC
T ss_pred HHHHHHhCCCCCCCcCeEeC----------------------CCCEEEcCCCCccccCCCCEee
Confidence 34557788888887443211 2467888888888887765544
No 79
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=74.07 E-value=0.86 Score=33.46 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=26.7
Q ss_pred CCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 287 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 287 ~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
.-.+++||+++....-+. ..+...||.|+..|...|=..|
T Consensus 5 LL~iL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dGIPv 44 (68)
T 2hf1_A 5 FLEILVCPLCKGPLVFDK----------------------SKDELICKGDRLAFPIKDGIPM 44 (68)
T ss_dssp CEEECBCTTTCCBCEEET----------------------TTTEEEETTTTEEEEEETTEEC
T ss_pred HhhheECCCCCCcCeEeC----------------------CCCEEEcCCCCcEecCCCCeee
Confidence 446788888885443211 1367889999998887765544
No 80
>2j49_A Transcription initiation factor TFIID subunit 5; nuclear protein, transcription regulation, TA TFIID, WD repeat; 2.3A {Saccharomyces cerevisiae} SCOP: d.379.1.1
Probab=73.26 E-value=1.7 Score=36.67 Aligned_cols=61 Identities=16% Similarity=0.340 Sum_probs=49.5
Q ss_pred HHHHHHHHhh----hhHhhhCCCcchhhchhHHHHHHHhcCChHHHHHHHHHhCccchhhhHHHHHHHHH
Q 018698 132 APALAWCSDN----KSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMA 197 (351)
Q Consensus 132 ~~AL~W~~en----k~~L~k~~S~LEF~Lr~q~fIeLir~~~~~eAI~yark~l~~~~~~~~~ei~~~m~ 197 (351)
..-..|+..+ |++|. .|-|=+-+.=|++||..| ..+|-.|..++-.-+...|.++|+++.+
T Consensus 15 ~~Lr~wv~~sld~yk~EL~----~lLyPlFvh~yL~Lv~~g-~~~A~~F~~~f~~~~~~~~~~~i~~L~~ 79 (148)
T 2j49_A 15 SMLKNWVDSSLEIYKPELS----YIMYPIFIYLFLNLVAKN-PVYARRFFDRFSPDFKDFHGSEINRLFS 79 (148)
T ss_dssp HHHHHHHHTSCTTTHHHHH----HHHHHHHHHHHHHHHHHC-HHHHHHHHHHHGGGGHHHHHHHHHTTTT
T ss_pred HHHHHHHHhCcHhhHHHHH----HHHHHHHHHHHHHHHHcC-HHHHHHHHHHHhHHhHHHHHHHHHHHhc
Confidence 3456788765 56664 578999999999999999 9999999998888787788888888765
No 81
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=71.35 E-value=1.4 Score=32.51 Aligned_cols=41 Identities=20% Similarity=0.305 Sum_probs=26.7
Q ss_pred CCCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCCceee
Q 018698 286 QHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 286 ~~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 348 (351)
..-.+++||+++....-+. ..+...||.|+..|...|=..|
T Consensus 4 ~LL~iL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dGIPv 44 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQR----------------------AQAELVCNADRLAFPVRDGVPI 44 (70)
T ss_dssp CCCCCCBCTTTCCBEEEET----------------------TTTEEEETTTTEEEEEETTEEC
T ss_pred HHhhheECCCCCCcCEEeC----------------------CCCEEEcCCCCceecCCCCeee
Confidence 3456788888877443211 1367888888888887765544
No 82
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=69.56 E-value=1.4 Score=32.47 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=14.8
Q ss_pred CCceecCCCCcccCcCCceee
Q 018698 328 NGKITCPRTGLVCNYSDLVKA 348 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~~~kv 348 (351)
.+...||.|+..|...|=..|
T Consensus 24 ~~~LiC~~cg~~YPI~dGIPv 44 (69)
T 2pk7_A 24 KTELISKGAGLAYPIRDGIPV 44 (69)
T ss_dssp SSEEEETTTTEEEEEETTEEC
T ss_pred CCEEEcCCCCcEecCcCCeee
Confidence 356788888888877665544
No 83
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=68.65 E-value=13 Score=29.96 Aligned_cols=45 Identities=20% Similarity=0.212 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHhcCChHHHHHH
Q 018698 89 DDAVNHLTSLVSRLQGLKRKDLVDIEVFQEAKKVIDALQNKEVAPALAW 137 (351)
Q Consensus 89 ~~~~~~l~~~i~rl~~lkrk~lvd~d~f~~~~~I~~~L~~~dl~~AL~W 137 (351)
+|+.++|+-+..+|.. +-++-.+...+.+|.++|.+||+..|++-
T Consensus 39 ~D~~KRL~~LfdkLn~----~~Ls~~v~~~L~~l~~al~~~dy~~A~~i 83 (118)
T 2yru_A 39 DDISRRLALLREQWAG----GKLSIPVKKRMALLVQELLHHQWDAADDI 83 (118)
T ss_dssp HHHHHHHHHHHHHHHH----TCSCHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 5555666666555544 55577889999999999999999998874
No 84
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.54 E-value=3.1 Score=30.88 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=27.6
Q ss_pred cCCccchHHHHHHHHHhCCCceecCCCCcccCcC
Q 018698 310 PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 310 p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 343 (351)
.|||.|-..+|.+|.+.. +.-+||.|...+...
T Consensus 33 ~C~h~fH~~Ci~kWl~~~-~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 33 TCGIRMHLPCVAKYFQSN-AEPRCPHCNDYWPHE 65 (74)
T ss_dssp SSCCEECHHHHHHHSTTC-SSCCCTTTCSCCCSC
T ss_pred CCCchhhHHHHHHHHHhc-CCCCCCCCcCcCCCC
Confidence 899999999999998543 347999999988754
No 85
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=67.10 E-value=2.3 Score=29.30 Aligned_cols=36 Identities=6% Similarity=0.089 Sum_probs=24.1
Q ss_pred ccCCccchHHHHHHHHHhCCCceecCCCCcccCcCC
Q 018698 309 LPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 309 Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 344 (351)
--||..|+...-....-.+...++|++|++.|...+
T Consensus 18 ~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~ 53 (62)
T 1vd4_A 18 PVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDE 53 (62)
T ss_dssp SSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECT
T ss_pred CCCCchhccHHHhHhhcCCCCCEECCCCCCccccCc
Confidence 348888877654432112345699999999997655
No 86
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=66.93 E-value=6.8 Score=27.02 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=28.4
Q ss_pred cccccc-ccHHHHhHHHHhhhhHHHHHHHHHHHHH
Q 018698 44 EHQFLR-VPFEHYKKTIRTNHRAVEKEITSVISNV 77 (351)
Q Consensus 44 e~~~l~-vP~E~l~k~fr~~qk~ieke~~~v~~~~ 77 (351)
|+.||+ ++||.|.+.....+..+|+|+..+-...
T Consensus 3 df~fLk~ls~eEL~~rl~~Ld~~Me~Ei~elr~RY 37 (51)
T 2jo8_A 3 DYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKY 37 (51)
T ss_dssp CCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHhCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 455666 8999999999999999999998776544
No 87
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=66.86 E-value=8.8 Score=31.72 Aligned_cols=61 Identities=16% Similarity=0.321 Sum_probs=46.8
Q ss_pred HHHHHHHHhh----hhHhhhCCCcchhhchhHHHHHHHhcCChHHHHHHHHHhCccchhhhHHHHHHHHH
Q 018698 132 APALAWCSDN----KSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMA 197 (351)
Q Consensus 132 ~~AL~W~~en----k~~L~k~~S~LEF~Lr~q~fIeLir~~~~~eAI~yark~l~~~~~~~~~ei~~~m~ 197 (351)
..-..|+++. |++| +.|-|=+-+.=|++||..|...+|-.|..++-+-+... .++|+++.+
T Consensus 13 ~~L~~wv~~sld~yk~EL----~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~-~~~i~~L~~ 77 (138)
T 2j4b_A 13 VSLKTWIEDSLDLFKNDL----LPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHYNK-SEEIKQFES 77 (138)
T ss_dssp HHHHHHHHHSCHHHHHHH----GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--C-HHHHHHHTT
T ss_pred HHHHHHHHhCcHhhHHHH----HHHHHHHHHHHHHHHHHCCChHHHHHHHHHHhHHHhhH-HHHHHHHhc
Confidence 3456788765 5566 46789999999999999999999999988877766655 777777755
No 88
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=62.89 E-value=8.9 Score=26.52 Aligned_cols=41 Identities=15% Similarity=0.094 Sum_probs=26.1
Q ss_pred CCceecc---CCccchHHHHH-HHHH--hCCCceecCCCCcccCcCC
Q 018698 304 NPPQVLP---NGYVYSTKALE-EMAK--KNNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 304 NpP~~Lp---~GhV~s~~al~-~l~~--~~~~~~~CP~~~~~~~~~~ 344 (351)
..|+.-+ ||..|....-. +=.+ .+...++|+.|++.|....
T Consensus 17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~ 63 (73)
T 1f2i_G 17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63 (73)
T ss_dssp CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHH
Confidence 3456654 88888765433 2111 2445699999999997543
No 89
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=62.58 E-value=2.1 Score=31.28 Aligned_cols=19 Identities=16% Similarity=0.247 Sum_probs=15.6
Q ss_pred CCceecCCCCcccCcCCce
Q 018698 328 NGKITCPRTGLVCNYSDLV 346 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~~~ 346 (351)
++.+.||||+..|......
T Consensus 38 ~g~~~CpYCg~~f~l~~~~ 56 (67)
T 2jrr_A 38 TGWVECPYCDCKYVLKGSK 56 (67)
T ss_dssp TSEEEETTTTEEEEETTSG
T ss_pred CCeEECCCCCCEEEECCCc
Confidence 5789999999999877543
No 90
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=61.04 E-value=3.3 Score=29.04 Aligned_cols=41 Identities=15% Similarity=0.296 Sum_probs=25.9
Q ss_pred CCCCCCeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecC--CCCcccCcCCceee
Q 018698 284 SKQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCP--RTGLVCNYSDLVKA 348 (351)
Q Consensus 284 ~~~~hS~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP--~~~~~~~~~~~~kv 348 (351)
....-.+++||+++.....+. +...|+ .|+..|...|=..|
T Consensus 4 d~~lL~iL~CP~c~~~L~~~~------------------------~~L~C~~~~c~~~YPI~dGIPv 46 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEERD------------------------AELICTGQDCGLAYPVRDGIPV 46 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEEET------------------------TEEEECSSSCCCEEEEETTEEC
T ss_pred CHHHHhheeCCCCCCcceecC------------------------CEEEcCCcCCCcEEeeECCEee
Confidence 345667788888877432211 567788 78888776654433
No 91
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=60.13 E-value=6.5 Score=31.40 Aligned_cols=57 Identities=9% Similarity=0.047 Sum_probs=44.2
Q ss_pred CCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCC
Q 018698 285 KQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 285 ~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 344 (351)
..+|.. |.|..-++.+++.+.++..-.|.+|++..-.++.. .+.+|..|++.....+
T Consensus 23 ~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~---~~~~C~~C~~~I~~~e 80 (131)
T 2xjy_A 23 QYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG---QDGLCASCDKRIRAYE 80 (131)
T ss_dssp EEEETTTCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHC---CCEECTTTCCEECTTS
T ss_pred CcccHHHcccCcCCCccccCCCeEEEECCEEeecCchhhhCC---CccChhhcCCccCccc
Confidence 345554 89999999998766788899999999999988742 2348999999886543
No 92
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=57.45 E-value=3.5 Score=31.17 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=14.2
Q ss_pred CCceecCCCCcccCcCC
Q 018698 328 NGKITCPRTGLVCNYSD 344 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~ 344 (351)
++.+.||||+..|....
T Consensus 51 ~g~~~CpYCg~~f~l~~ 67 (80)
T 2jvm_A 51 TGFVECGYCDRRYIHES 67 (80)
T ss_dssp TCEEECSSSSCEEEEHH
T ss_pred CCeEECCCCCCEEEecC
Confidence 57899999999997654
No 93
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=57.41 E-value=3.5 Score=31.66 Aligned_cols=19 Identities=16% Similarity=0.420 Sum_probs=15.8
Q ss_pred CCceecCCCCcccCcCCce
Q 018698 328 NGKITCPRTGLVCNYSDLV 346 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~~~ 346 (351)
.+...||||+..|..+.-.
T Consensus 46 ~g~~~CpYCg~~y~~~~~~ 64 (87)
T 2jz8_A 46 TDEKICPYCSTLYRYDPSL 64 (87)
T ss_dssp CCEECCTTTCCEEECCTTS
T ss_pred CCeEECCCCCCEeEcCCCC
Confidence 5789999999999877543
No 94
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=45.37 E-value=3.4 Score=28.90 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=11.5
Q ss_pred CceecCCCCcccCcCCcee
Q 018698 329 GKITCPRTGLVCNYSDLVK 347 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~~~k 347 (351)
...+||.|+.. .+++++
T Consensus 35 ~dw~CP~Cg~~--K~~F~~ 51 (54)
T 4rxn_A 35 DDWVCPLCGVG--KDEFEE 51 (54)
T ss_dssp TTCBCTTTCCB--GGGEEE
T ss_pred CCCcCcCCCCc--HHHceE
Confidence 35799999985 444443
No 95
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=44.93 E-value=15 Score=25.45 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=23.2
Q ss_pred ccCCccchHHHH-HHHHH--hCCCceecCCCCcccCcC
Q 018698 309 LPNGYVYSTKAL-EEMAK--KNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 309 Lp~GhV~s~~al-~~l~~--~~~~~~~CP~~~~~~~~~ 343 (351)
--||..+...+- .+=.+ .+...++|+.||+.|...
T Consensus 8 ~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~ 45 (60)
T 4gzn_C 8 NFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQ 45 (60)
T ss_dssp TTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSH
T ss_pred CCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCH
Confidence 358888876553 32211 245569999999999764
No 96
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=44.53 E-value=57 Score=29.73 Aligned_cols=60 Identities=10% Similarity=0.113 Sum_probs=39.6
Q ss_pred HhcCChHHHHHHHHhhhhHhhhCCCcch-hhchhHHHHHHHhcCChHHHHHHHHHhCccch
Q 018698 126 LQNKEVAPALAWCSDNKSRLKKSKSKFE-FQLRLQEFIELVRGENNLRAITYARKYLAPWG 185 (351)
Q Consensus 126 L~~~dl~~AL~W~~enk~~L~k~~S~LE-F~Lr~q~fIeLir~~~~~eAI~yark~l~~~~ 185 (351)
...|+.+.|+.++.+--..+...+...+ -..+..-=.-....|+..+|+.|.++-+.-+.
T Consensus 112 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 172 (378)
T 3q15_A 112 FDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQ 172 (378)
T ss_dssp HHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 4578999999998887776666554322 12222222234467899999999998876543
No 97
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=44.37 E-value=8.8 Score=20.73 Aligned_cols=14 Identities=21% Similarity=0.377 Sum_probs=11.4
Q ss_pred ceecCCCCcccCcC
Q 018698 330 KITCPRTGLVCNYS 343 (351)
Q Consensus 330 ~~~CP~~~~~~~~~ 343 (351)
.++|+.|++.|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2m0f_A 2 PLKCRECGKQFTTS 15 (29)
T ss_dssp CEECTTTSCEESCH
T ss_pred CccCCCCCCccCCh
Confidence 47899999998753
No 98
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=43.75 E-value=8.3 Score=25.04 Aligned_cols=17 Identities=18% Similarity=0.483 Sum_probs=13.9
Q ss_pred CCceecCCCCcccCcCC
Q 018698 328 NGKITCPRTGLVCNYSD 344 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~ 344 (351)
...++||+||+.+...+
T Consensus 7 ~~~~~C~~C~~~i~~~~ 23 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPVWD 23 (39)
T ss_dssp CCEEECTTTCCEEEGGG
T ss_pred CCCcccccccCcCCccc
Confidence 46789999999987654
No 99
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.32 E-value=11 Score=22.00 Aligned_cols=15 Identities=20% Similarity=0.355 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|++|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2els_A 8 KIFTCEYCNKVFKFK 22 (36)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCEECCCCCceeCCH
Confidence 468999999999754
No 100
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=43.24 E-value=10 Score=22.18 Aligned_cols=15 Identities=20% Similarity=0.335 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 10 k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 10 KPFQCPDCDRSFSRS 24 (37)
T ss_dssp SSBCCTTTCCCBSSH
T ss_pred CCccCCCCCcccCcH
Confidence 458999999999754
No 101
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=42.83 E-value=8.9 Score=20.77 Aligned_cols=13 Identities=8% Similarity=0.094 Sum_probs=11.1
Q ss_pred eecCCCCcccCcC
Q 018698 331 ITCPRTGLVCNYS 343 (351)
Q Consensus 331 ~~CP~~~~~~~~~ 343 (351)
+.|+.|++.|...
T Consensus 3 ~~C~~C~~~f~~~ 15 (29)
T 1ard_A 3 FVCEVCTRAFARQ 15 (29)
T ss_dssp CBCTTTCCBCSSH
T ss_pred eECCCCCcccCCH
Confidence 7899999998754
No 102
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=42.50 E-value=10 Score=20.42 Aligned_cols=14 Identities=7% Similarity=0.019 Sum_probs=11.7
Q ss_pred ceecCCCCcccCcC
Q 018698 330 KITCPRTGLVCNYS 343 (351)
Q Consensus 330 ~~~CP~~~~~~~~~ 343 (351)
.++|+.||+.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvh_A 3 PFSCSLCPQRSRDF 16 (27)
T ss_dssp CEECSSSSCEESSH
T ss_pred CccCCCcChhhCCH
Confidence 47999999998754
No 103
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=42.06 E-value=9.8 Score=27.71 Aligned_cols=25 Identities=12% Similarity=0.128 Sum_probs=19.6
Q ss_pred HHHHHHHHh--cCChHHHHHHHHhhhh
Q 018698 119 AKKVIDALQ--NKEVAPALAWCSDNKS 143 (351)
Q Consensus 119 ~~~I~~~L~--~~dl~~AL~W~~enk~ 143 (351)
....+++|+ +||++.|++|+-.+.+
T Consensus 34 ~~an~~AL~at~Gnve~Ave~L~~~~~ 60 (67)
T 2dna_A 34 YNANLQALIATDGDTNAAIYKLKSSQG 60 (67)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 346677777 7999999999987744
No 104
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=40.68 E-value=9.7 Score=20.31 Aligned_cols=13 Identities=8% Similarity=-0.074 Sum_probs=10.9
Q ss_pred eecCCCCcccCcC
Q 018698 331 ITCPRTGLVCNYS 343 (351)
Q Consensus 331 ~~CP~~~~~~~~~ 343 (351)
++|+.|++.|...
T Consensus 2 ~~C~~C~k~f~~~ 14 (27)
T 1znf_A 2 YKCGLCERSFVEK 14 (27)
T ss_dssp CBCSSSCCBCSSH
T ss_pred ccCCCCCCcCCCH
Confidence 6899999999764
No 105
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=39.85 E-value=24 Score=24.16 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=21.6
Q ss_pred CCccchHHHHHHH-HH--hCCCceecCC--CCcccCcCC
Q 018698 311 NGYVYSTKALEEM-AK--KNNGKITCPR--TGLVCNYSD 344 (351)
Q Consensus 311 ~GhV~s~~al~~l-~~--~~~~~~~CP~--~~~~~~~~~ 344 (351)
||.+|....-.+. .+ .+...++|++ |++.|....
T Consensus 25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~ 63 (72)
T 2epa_A 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63 (72)
T ss_dssp TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHH
T ss_pred CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHH
Confidence 8998875543321 11 1345699976 999997543
No 106
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=39.77 E-value=18 Score=32.69 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=23.8
Q ss_pred cCCccchHHHHHHHHHhCCCceecCCCCccc
Q 018698 310 PNGYVYSTKALEEMAKKNNGKITCPRTGLVC 340 (351)
Q Consensus 310 p~GhV~s~~al~~l~~~~~~~~~CP~~~~~~ 340 (351)
-|+-.++...+..+.+ ++..+.||+||-..
T Consensus 203 GC~~~lppq~~~~i~~-~~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 203 GCFIRLNDKIYTEVLT-SGDMITCPYCGRIL 232 (256)
T ss_dssp TTCCBCCHHHHHHHHH-SSSCEECTTTCCEE
T ss_pred CCCeeeCHHHHHHHHC-CCCEEECCCCCeeE
Confidence 4777888888888864 66789999999754
No 107
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=39.62 E-value=20 Score=23.11 Aligned_cols=34 Identities=9% Similarity=0.114 Sum_probs=21.3
Q ss_pred cCCccchHHH-HHHHHH--hCCCceecCCCCcccCcC
Q 018698 310 PNGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 310 p~GhV~s~~a-l~~l~~--~~~~~~~CP~~~~~~~~~ 343 (351)
-||..+.... |..=.+ .+...++|+.|++.|...
T Consensus 9 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 45 (57)
T 3uk3_C 9 YCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQK 45 (57)
T ss_dssp TTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSH
T ss_pred CCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCH
Confidence 4777775543 332211 234569999999998754
No 108
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=39.55 E-value=25 Score=31.60 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=27.0
Q ss_pred CCccchHHHHHHHHHhCCCceecCCCCcccCcC
Q 018698 311 NGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 311 ~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 343 (351)
||+.+-..++.++.+ ..+..+||.|+..+...
T Consensus 199 C~~~~H~~C~~~~~~-~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 199 CGIRMHLPCVAKYFQ-SNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp SCCEECHHHHHHHTT-TCSSCBCTTTCCBCCSC
T ss_pred cChHHHHHHHHHHHH-hCCCCCCCCCCCCCCCC
Confidence 999999999999965 34567999999988765
No 109
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.50 E-value=5.8 Score=27.01 Aligned_cols=18 Identities=22% Similarity=0.545 Sum_probs=14.6
Q ss_pred CCceecCCCCcccCcCCc
Q 018698 328 NGKITCPRTGLVCNYSDL 345 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~~ 345 (351)
++.+.||+|+..|...+.
T Consensus 10 ~~~~~CPrCn~~f~~~~s 27 (49)
T 2e72_A 10 GGRKICPRCNAQFRVTEA 27 (49)
T ss_dssp SSCCCCTTTCCCCSSHHH
T ss_pred CCceeCCcccccccchHH
Confidence 467899999999987543
No 110
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=39.45 E-value=8.9 Score=20.86 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=11.6
Q ss_pred ceecCCCCcccCcC
Q 018698 330 KITCPRTGLVCNYS 343 (351)
Q Consensus 330 ~~~CP~~~~~~~~~ 343 (351)
.++|+.|++.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvg_A 3 PYRCPLCRAGCPSL 16 (27)
T ss_dssp TEEETTTTEEESCH
T ss_pred CcCCCCCCcccCCH
Confidence 47999999998754
No 111
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=39.37 E-value=10 Score=20.44 Aligned_cols=14 Identities=14% Similarity=0.294 Sum_probs=11.6
Q ss_pred ceecCCCCcccCcC
Q 018698 330 KITCPRTGLVCNYS 343 (351)
Q Consensus 330 ~~~CP~~~~~~~~~ 343 (351)
.++|+.|++.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 3 PYSCSVCGKRFSLK 16 (28)
T ss_dssp SEECSSSCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 47999999998754
No 112
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=39.03 E-value=12 Score=20.07 Aligned_cols=14 Identities=21% Similarity=0.330 Sum_probs=11.5
Q ss_pred eecCCCCcccCcCC
Q 018698 331 ITCPRTGLVCNYSD 344 (351)
Q Consensus 331 ~~CP~~~~~~~~~~ 344 (351)
++|+.|++.|....
T Consensus 3 ~~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 3 HKCPHCDKKFNQVG 16 (29)
T ss_dssp CCCSSCCCCCCTTT
T ss_pred CcCCCCCcccCCHH
Confidence 68999999997653
No 113
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=38.71 E-value=78 Score=28.71 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=42.1
Q ss_pred HhcCChHHHHHHHHhhhhHhhhCCCcc-hhhchhHHHHHHHhcCChHHHHHHHHHhCccc
Q 018698 126 LQNKEVAPALAWCSDNKSRLKKSKSKF-EFQLRLQEFIELVRGENNLRAITYARKYLAPW 184 (351)
Q Consensus 126 L~~~dl~~AL~W~~enk~~L~k~~S~L-EF~Lr~q~fIeLir~~~~~eAI~yark~l~~~ 184 (351)
...|+.+.|+.++.+--..+.+.+... .-..+..-=.-....|++.+|+.|.++-+.-+
T Consensus 114 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 173 (383)
T 3ulq_A 114 LDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIY 173 (383)
T ss_dssp HHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 457999999999988877776665443 33333333444556799999999999988644
No 114
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=38.56 E-value=22 Score=22.95 Aligned_cols=34 Identities=9% Similarity=0.157 Sum_probs=20.9
Q ss_pred cCCccchHHH-HHHHHHh--CCCceecCCCCcccCcC
Q 018698 310 PNGYVYSTKA-LEEMAKK--NNGKITCPRTGLVCNYS 343 (351)
Q Consensus 310 p~GhV~s~~a-l~~l~~~--~~~~~~CP~~~~~~~~~ 343 (351)
-||..+.... |..=.+. +...++|+.|++.|...
T Consensus 6 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 42 (57)
T 1bbo_A 6 ECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTK 42 (57)
T ss_dssp TTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSH
T ss_pred CCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCH
Confidence 3777775444 3332221 33459999999999754
No 115
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=38.31 E-value=12 Score=20.22 Aligned_cols=14 Identities=29% Similarity=0.406 Sum_probs=11.5
Q ss_pred eecCCCCcccCcCC
Q 018698 331 ITCPRTGLVCNYSD 344 (351)
Q Consensus 331 ~~CP~~~~~~~~~~ 344 (351)
+.|+.|++.|....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 1rik_A 3 FACPECPKRFMRSD 16 (29)
T ss_dssp EECSSSSCEESCSH
T ss_pred ccCCCCCchhCCHH
Confidence 78999999987653
No 116
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.67 E-value=44 Score=23.28 Aligned_cols=59 Identities=8% Similarity=0.040 Sum_probs=39.0
Q ss_pred CCCCCCchhhhcccCCC-CCCCCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHHH
Q 018698 265 KEDPLSQESFRKLASPL-PYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAK 325 (351)
Q Consensus 265 ~~cP~c~~~~~~l~~~L-P~~~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~ 325 (351)
..|+.|...+.+-..-+ .....+|.. |.|..-+..++ +..+...+|.+|++....++.+
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~--~~~~~~~~~~~yC~~cy~~~~~ 66 (72)
T 1x61_A 6 SGCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLR--GQHFYAVERRAYCEGCYVATLE 66 (72)
T ss_dssp CCCSSSCSCCCSSSCCEECSSSEECTTTCBCSSSCCBCT--TSCEEESSSCEEEHHHHHHHHH
T ss_pred CCCccCCCccCCCceEEEECCCeEcccCCcccccCCcCC--cCcCEeeCCeEECHHHHHHHHc
Confidence 45777766544211111 122445554 99999998885 4467888999999999888764
No 117
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.64 E-value=14 Score=21.34 Aligned_cols=15 Identities=13% Similarity=0.390 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elt_A 8 KPYKCPQCSYASAIK 22 (36)
T ss_dssp CSEECSSSSCEESSH
T ss_pred CCCCCCCCCcccCCH
Confidence 458999999999754
No 118
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=37.61 E-value=14 Score=21.04 Aligned_cols=15 Identities=13% Similarity=-0.068 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 6 k~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 6 SGYVCALCLKKFVSS 20 (35)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCcchhCCH
Confidence 458999999999764
No 119
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=37.01 E-value=8.3 Score=30.68 Aligned_cols=77 Identities=10% Similarity=0.048 Sum_probs=50.8
Q ss_pred CCCCCCchhhhccc-CCCCCCCCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 265 KEDPLSQESFRKLA-SPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 265 ~~cP~c~~~~~~l~-~~LP~~~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
..|+.|...+..-. .. -....+|.. |.|..=+..+.+....+...+|.+|++..-.++.. .+-+|-.|++....
T Consensus 6 ~~C~~C~~~I~~~~~~~-a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~---~~~~C~~C~~~I~~ 81 (122)
T 1m3v_A 6 KRCAGCGGKIADRFLLY-AMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFG---NSGAGGSGGHMGSG 81 (122)
T ss_dssp CCBSSSSSCCCSSCCEE-ETTEEECHHHHCCSSSCCCTTTSEECCEEETTEEECHHHHHHHHC---CCCSSSCSSCCSCC
T ss_pred CCCcccCCEeCCcEEEE-ECCceeHhhCCCcCCCCCcccccCCeEEEECCeeecHHHHHHHcC---CCCccccCCCCcCc
Confidence 35666665443211 11 112455654 99999999987655567889999999999988752 12278888887775
Q ss_pred CCc
Q 018698 343 SDL 345 (351)
Q Consensus 343 ~~~ 345 (351)
.++
T Consensus 82 ~~~ 84 (122)
T 1m3v_A 82 GDV 84 (122)
T ss_dssp EES
T ss_pred hhe
Confidence 443
No 120
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=36.97 E-value=12 Score=20.16 Aligned_cols=14 Identities=14% Similarity=0.199 Sum_probs=11.5
Q ss_pred ceecCCCCcccCcC
Q 018698 330 KITCPRTGLVCNYS 343 (351)
Q Consensus 330 ~~~CP~~~~~~~~~ 343 (351)
.+.|+.|++.|...
T Consensus 3 ~~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 3 PYQCDYCGRSFSDP 16 (30)
T ss_dssp CEECTTTCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 47999999998753
No 121
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=43.19 E-value=7.2 Score=20.87 Aligned_cols=15 Identities=27% Similarity=0.299 Sum_probs=11.9
Q ss_pred eecCCCCcccCcCCc
Q 018698 331 ITCPRTGLVCNYSDL 345 (351)
Q Consensus 331 ~~CP~~~~~~~~~~~ 345 (351)
++|+.|++.|.....
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQ 17 (26)
Confidence 689999999986543
No 122
>4gif_A Polycystic kidney disease 2-like 1 protein; coiled-coil, trimer, Trp channel, transient receptor potenti channel, polycystic kidney disease (PKD); 2.80A {Homo sapiens}
Probab=36.64 E-value=31 Score=23.05 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHhhhhc
Q 018698 70 ITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRK 108 (351)
Q Consensus 70 ~~~v~~~~~~~~k~~~~~~~~~~~~l~~~i~rl~~lkrk 108 (351)
+..+...+..++ .+...+...||.+..||..++|+
T Consensus 9 F~~L~rRVlqlE----~~l~gI~S~idav~~Kl~~~Er~ 43 (45)
T 4gif_A 9 FYMLTRRVLQLE----TVLEGVVSQIDAVGSKLKMLERK 43 (45)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhc
Confidence 334444444444 33556778899999999888876
No 123
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=36.56 E-value=11 Score=36.34 Aligned_cols=34 Identities=18% Similarity=-0.021 Sum_probs=26.6
Q ss_pred ccCCccchHHHHHHHHHhCC--------CceecCCCCcccCc
Q 018698 309 LPNGYVYSTKALEEMAKKNN--------GKITCPRTGLVCNY 342 (351)
Q Consensus 309 Lp~GhV~s~~al~~l~~~~~--------~~~~CP~~~~~~~~ 342 (351)
.+|||-|-..+|.+|.+... -.-.||||.+..+.
T Consensus 332 ~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 332 AKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp TTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred CccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 58999999999999986421 12489999987654
No 124
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=36.50 E-value=5.5 Score=27.48 Aligned_cols=11 Identities=27% Similarity=0.570 Sum_probs=8.7
Q ss_pred CceecCCCCcc
Q 018698 329 GKITCPRTGLV 339 (351)
Q Consensus 329 ~~~~CP~~~~~ 339 (351)
...+||.|+..
T Consensus 34 ~dw~CP~Cg~~ 44 (52)
T 1yk4_A 34 DDWVCPLCGAP 44 (52)
T ss_dssp TTCBCTTTCCB
T ss_pred CCCcCCCCCCC
Confidence 35799999974
No 125
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=36.37 E-value=1.3e+02 Score=22.17 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=37.0
Q ss_pred HHhcCChHHHHHHHHhhhhHhhhCCC--cchhhchhHHHHHHHhcCChHHHHHHHHHhC
Q 018698 125 ALQNKEVAPALAWCSDNKSRLKKSKS--KFEFQLRLQEFIELVRGENNLRAITYARKYL 181 (351)
Q Consensus 125 ~L~~~dl~~AL~W~~enk~~L~k~~S--~LEF~Lr~q~fIeLir~~~~~eAI~yark~l 181 (351)
....++...|+.|..+--..+..-.. .-.-.++.+--.-+.+.|++.+|+.+.++-+
T Consensus 15 ~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 15 AYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45789999999999887665543221 1112223333334557899999999988654
No 126
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=36.09 E-value=29 Score=26.71 Aligned_cols=49 Identities=18% Similarity=0.277 Sum_probs=38.7
Q ss_pred eeeecccccc--CCCCCcee--ccCCccchHHHHHHHHHhCCCceecCCCCcccC
Q 018698 291 LVCYITKELM--DTENPPQV--LPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 341 (351)
Q Consensus 291 ~vCpis~e~~--~e~NpP~~--Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~ 341 (351)
=+|-|-|+.. +++..|++ --||.-+++-+.+--.+ ++.-.||.|+..|.
T Consensus 17 qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErk--eG~q~CpqCktrYk 69 (93)
T 1weo_A 17 QFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERR--EGTQNCPQCKTRYK 69 (93)
T ss_dssp CBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHH--TSCSSCTTTCCCCC
T ss_pred CccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHh--ccCccccccCCccc
Confidence 4788888875 66666666 48999999999987643 56789999999997
No 127
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=35.79 E-value=26 Score=22.92 Aligned_cols=33 Identities=9% Similarity=0.137 Sum_probs=20.6
Q ss_pred CCccchHHH-HHHHHHh--CCCceecCCCCcccCcC
Q 018698 311 NGYVYSTKA-LEEMAKK--NNGKITCPRTGLVCNYS 343 (351)
Q Consensus 311 ~GhV~s~~a-l~~l~~~--~~~~~~CP~~~~~~~~~ 343 (351)
||..+.... |..=.+. +...++|+.|++.|...
T Consensus 8 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 43 (60)
T 2adr_A 8 CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR 43 (60)
T ss_dssp TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSH
T ss_pred CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence 777776443 3332221 23458999999999754
No 128
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=35.28 E-value=22 Score=26.39 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=22.9
Q ss_pred cCCccchHHH-HHHHHHh--CCCceecCCCCcccCcCC
Q 018698 310 PNGYVYSTKA-LEEMAKK--NNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 310 p~GhV~s~~a-l~~l~~~--~~~~~~CP~~~~~~~~~~ 344 (351)
-||..|...+ |.+=.+. ++..++|++|++.|....
T Consensus 33 ~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~ 70 (85)
T 2lv2_A 33 VCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSP 70 (85)
T ss_dssp TSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHH
T ss_pred CCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHH
Confidence 3888876554 4443222 334699999999997654
No 129
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=35.23 E-value=15 Score=20.01 Aligned_cols=14 Identities=14% Similarity=0.188 Sum_probs=11.5
Q ss_pred eecCCCCcccCcCC
Q 018698 331 ITCPRTGLVCNYSD 344 (351)
Q Consensus 331 ~~CP~~~~~~~~~~ 344 (351)
+.|+.|++.|....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (30)
T 1paa_A 3 YACGLCNRAFTRRD 16 (30)
T ss_dssp SBCTTTCCBCSSSH
T ss_pred cCCcccCcccCChH
Confidence 68999999997643
No 130
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.12 E-value=16 Score=21.16 Aligned_cols=15 Identities=7% Similarity=0.133 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elq_A 8 KPFKCSLCEYATRSK 22 (36)
T ss_dssp CSEECSSSSCEESCH
T ss_pred CCccCCCCCchhCCH
Confidence 458999999999754
No 131
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.12 E-value=16 Score=21.34 Aligned_cols=15 Identities=13% Similarity=0.330 Sum_probs=12.5
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 8 RAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCEECSSSSCEECSS
T ss_pred CCeECCCCChhhccC
Confidence 458999999999865
No 132
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.74 E-value=17 Score=20.90 Aligned_cols=15 Identities=13% Similarity=0.116 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 8 ~~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 8 KTHLCDMCGKKFKSK 22 (36)
T ss_dssp SSCBCTTTCCBCSSH
T ss_pred CCeecCcCCCCcCch
Confidence 458999999999754
No 133
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=34.65 E-value=34 Score=24.19 Aligned_cols=34 Identities=9% Similarity=0.005 Sum_probs=17.0
Q ss_pred ccCCccchHHHH-HHHHH--hCCCceecCCCCcccCc
Q 018698 309 LPNGYVYSTKAL-EEMAK--KNNGKITCPRTGLVCNY 342 (351)
Q Consensus 309 Lp~GhV~s~~al-~~l~~--~~~~~~~CP~~~~~~~~ 342 (351)
--||..+....- ..=.+ .+...++|+.|++.|..
T Consensus 38 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 74 (90)
T 1a1h_A 38 RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR 74 (90)
T ss_dssp TTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred CCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCC
Confidence 346666654332 22111 13345677777777654
No 134
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=34.58 E-value=15 Score=25.05 Aligned_cols=22 Identities=14% Similarity=0.197 Sum_probs=17.6
Q ss_pred HHHHHHHh--cCChHHHHHHHHhh
Q 018698 120 KKVIDALQ--NKEVAPALAWCSDN 141 (351)
Q Consensus 120 ~~I~~~L~--~~dl~~AL~W~~en 141 (351)
.+++.+|+ +||++.|++|+-.+
T Consensus 27 ~~~~~AL~~t~gnve~Ave~L~~~ 50 (53)
T 2knz_A 27 EANLQALIATGGDINAAIERLLGS 50 (53)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHc
Confidence 46667776 68999999998765
No 135
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.04 E-value=17 Score=25.73 Aligned_cols=45 Identities=7% Similarity=0.008 Sum_probs=30.4
Q ss_pred CCCCCCchhhhcccCCC-CCCCCCCC---------eeeeeccccccCCCCCceecc
Q 018698 265 KEDPLSQESFRKLASPL-PYSKQHHS---------KLVCYITKELMDTENPPQVLP 310 (351)
Q Consensus 265 ~~cP~c~~~~~~l~~~L-P~~~~~hS---------~~vCpis~e~~~e~NpP~~Lp 310 (351)
..||+|...+.. +..+ |-.|.|+. ...||+-+..++..++--.+.
T Consensus 16 ~~C~IC~~~~~~-p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~ 70 (72)
T 2djb_A 16 ILCSICKGYLID-ATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSGPS 70 (72)
T ss_dssp GSCTTTSSCCSS-CEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCCCCS
T ss_pred CCCCCCChHHHC-cCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCcccccccCC
Confidence 368999777654 3334 77777665 357999999998776544333
No 136
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=34.00 E-value=13 Score=20.07 Aligned_cols=13 Identities=15% Similarity=0.174 Sum_probs=11.0
Q ss_pred eecCCCCcccCcC
Q 018698 331 ITCPRTGLVCNYS 343 (351)
Q Consensus 331 ~~CP~~~~~~~~~ 343 (351)
+.|+.|++.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (30)
T 1klr_A 3 YQCQYCEFRSADS 15 (30)
T ss_dssp CCCSSSSCCCSCS
T ss_pred ccCCCCCCccCCH
Confidence 6899999998764
No 137
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=33.56 E-value=18 Score=20.72 Aligned_cols=15 Identities=7% Similarity=-0.029 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 6 k~~~C~~C~k~f~~~ 20 (35)
T 1srk_A 6 RPFVCRICLSAFTTK 20 (35)
T ss_dssp SCEECSSSCCEESSH
T ss_pred cCeeCCCCCcccCCH
Confidence 458999999999754
No 138
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=33.18 E-value=30 Score=23.83 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=21.3
Q ss_pred cCCccchHHH-HHHHHH-h-CCCceecCCCCcccCcC
Q 018698 310 PNGYVYSTKA-LEEMAK-K-NNGKITCPRTGLVCNYS 343 (351)
Q Consensus 310 p~GhV~s~~a-l~~l~~-~-~~~~~~CP~~~~~~~~~ 343 (351)
-||..+.... |.+=.+ . +...++|+.|++.|...
T Consensus 22 ~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~ 58 (74)
T 2lce_A 22 RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP 58 (74)
T ss_dssp TSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCH
T ss_pred CCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCH
Confidence 4777776443 333211 2 33459999999999754
No 139
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.04 E-value=16 Score=21.32 Aligned_cols=15 Identities=13% Similarity=0.235 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elo_A 8 RSYSCPVCEKSFSED 22 (37)
T ss_dssp CCCEETTTTEECSSH
T ss_pred CCcCCCCCCCccCCH
Confidence 458999999999764
No 140
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.01 E-value=47 Score=23.69 Aligned_cols=63 Identities=13% Similarity=0.162 Sum_probs=40.9
Q ss_pred ccCCCCCCCCCCchhhhcccCCCCCCCCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHH
Q 018698 259 YEDDCTKEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 324 (351)
Q Consensus 259 ~~~~~~~~cP~c~~~~~~l~~~LP~~~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~ 324 (351)
|.......|+.|...+.+-.+ ......+|.. |.|..-+..++.. .+...+|.+|++....++.
T Consensus 10 y~~~~~~~C~~C~~~I~~~~v-~a~~~~~H~~CF~C~~C~~~L~~~--~~~~~~~~~yC~~cy~~~f 73 (80)
T 2cuq_A 10 YENKFAPRCARCSKTLTQGGV-TYRDQPWHRECLVCTGCQTPLAGQ--QFTSRDEDPYCVACFGELF 73 (80)
T ss_dssp CCCCSSCCCTTTCCCCCSCCE-ESSSSEECTTTCBCSSSCCBCTTC--CEEECSSSEEEHHHHHHHT
T ss_pred HccccCCcCCCCCCEecCcEE-EECCchhhhhhCCcccCCCcCCCC--eeEeECCEEECHHHHHHHc
Confidence 433334568888766543111 1122445544 8999988888643 5788999999999887763
No 141
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=32.82 E-value=19 Score=24.83 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=17.0
Q ss_pred HHHHHHh--cCChHHHHHHHHhh
Q 018698 121 KVIDALQ--NKEVAPALAWCSDN 141 (351)
Q Consensus 121 ~I~~~L~--~~dl~~AL~W~~en 141 (351)
..+.+|+ +||++.|++|+-.+
T Consensus 26 ~n~~AL~~~~Gdv~~Ave~L~~~ 48 (54)
T 2dah_A 26 ANLQALIATGGDVDAAVEKLRQS 48 (54)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHhC
Confidence 5566665 79999999998766
No 142
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=32.81 E-value=55 Score=31.58 Aligned_cols=16 Identities=0% Similarity=0.148 Sum_probs=9.5
Q ss_pred ccccHHHHhHHHHhhh
Q 018698 48 LRVPFEHYKKTIRTNH 63 (351)
Q Consensus 48 l~vP~E~l~k~fr~~q 63 (351)
|+--+|.|+.+....+
T Consensus 65 ~~~rIe~L~~~L~~~s 80 (390)
T 1deq_A 65 FTSRINKLRDSLFNYQ 80 (390)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4556777776654443
No 143
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=38.72 E-value=9.4 Score=20.86 Aligned_cols=16 Identities=6% Similarity=-0.031 Sum_probs=12.5
Q ss_pred ceecCCCCcccCcCCc
Q 018698 330 KITCPRTGLVCNYSDL 345 (351)
Q Consensus 330 ~~~CP~~~~~~~~~~~ 345 (351)
.++|+.|++.|.....
T Consensus 3 ~~~C~~C~k~f~~~~~ 18 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGA 18 (30)
Confidence 3789999999976543
No 144
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=32.44 E-value=16 Score=22.94 Aligned_cols=14 Identities=21% Similarity=0.399 Sum_probs=11.4
Q ss_pred eecCCCCcccCcCC
Q 018698 331 ITCPRTGLVCNYSD 344 (351)
Q Consensus 331 ~~CP~~~~~~~~~~ 344 (351)
|.||.|.+.+.-.+
T Consensus 6 FiCP~C~~~l~s~~ 19 (34)
T 3mjh_B 6 FICPQCMKSLGSAD 19 (34)
T ss_dssp EECTTTCCEESSHH
T ss_pred cCCcHHHHHcCCHH
Confidence 99999999886544
No 145
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.10 E-value=29 Score=23.81 Aligned_cols=35 Identities=11% Similarity=0.271 Sum_probs=22.4
Q ss_pred ccCCccchHHHH-HHHHH--hCCCceecCCCCcccCcC
Q 018698 309 LPNGYVYSTKAL-EEMAK--KNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 309 Lp~GhV~s~~al-~~l~~--~~~~~~~CP~~~~~~~~~ 343 (351)
--||..|....- .+=.+ .+...++|+.|++.|...
T Consensus 18 ~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~ 55 (72)
T 1x6e_A 18 VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 55 (72)
T ss_dssp SSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSH
T ss_pred CCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCH
Confidence 348888865543 33212 134569999999999754
No 146
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=31.94 E-value=43 Score=23.53 Aligned_cols=33 Identities=12% Similarity=0.300 Sum_probs=21.6
Q ss_pred CCccchHHH-HHHHHH--hCCCceecCCCCcccCcC
Q 018698 311 NGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 311 ~GhV~s~~a-l~~l~~--~~~~~~~CP~~~~~~~~~ 343 (351)
||..+.... |..=.+ .+...+.|+.|++.|...
T Consensus 43 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 78 (89)
T 2wbs_A 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRS 78 (89)
T ss_dssp TCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSH
T ss_pred CCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCH
Confidence 888886543 333211 244569999999998754
No 147
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=31.52 E-value=20 Score=25.19 Aligned_cols=22 Identities=23% Similarity=0.223 Sum_probs=17.4
Q ss_pred HHHHHHHh--cCChHHHHHHHHhh
Q 018698 120 KKVIDALQ--NKEVAPALAWCSDN 141 (351)
Q Consensus 120 ~~I~~~L~--~~dl~~AL~W~~en 141 (351)
..++.+|+ +||++.|++|+-.+
T Consensus 33 ~~~~~AL~~~~gnve~Ave~L~~~ 56 (58)
T 1wr1_B 33 DRNVAALRRSGGSVQGALDSLLNG 56 (58)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 46677776 79999999998654
No 148
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=31.51 E-value=13 Score=31.26 Aligned_cols=82 Identities=10% Similarity=0.023 Sum_probs=44.0
Q ss_pred CCCCCCchhhhcccCCC-CCCCCCCC-eeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCc
Q 018698 265 KEDPLSQESFRKLASPL-PYSKQHHS-KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 342 (351)
Q Consensus 265 ~~cP~c~~~~~~l~~~L-P~~~~~hS-~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~ 342 (351)
..|..|...+.+-..-+ .....+|. -|.|..-+..+...+.-+...+|++|++....++.+...+...+-+-...++.
T Consensus 66 ~~C~~C~~~I~~~~~v~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~~C~~c~~~~~~~~~~~~~~~rprt~~~~ 145 (169)
T 2rgt_A 66 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQGGSGGSGGSGGGTPMVA 145 (169)
T ss_dssp CBCTTTCCBCCTTSEEEEETTEEEEGGGCBCTTTCCBCCTTCEEEECTTSCEEEHHHHHHHHHCC----------EEEEC
T ss_pred ccccccccccCCCcEEEEcCCceEeeCCCcCCCCCCCCCCCCceEEccCCeEECHHHHHHHhhccCCCCCCcCCCCcccH
Confidence 45666655443211100 12234554 38999999888755555567899999999998886543222233233335555
Q ss_pred CCce
Q 018698 343 SDLV 346 (351)
Q Consensus 343 ~~~~ 346 (351)
++.+
T Consensus 146 ~q~~ 149 (169)
T 2rgt_A 146 ASPE 149 (169)
T ss_dssp CCCE
T ss_pred HHHH
Confidence 4443
No 149
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=31.27 E-value=40 Score=28.72 Aligned_cols=58 Identities=10% Similarity=0.160 Sum_probs=38.4
Q ss_pred CCCCCchhhhcccCCCCCCCCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHHH
Q 018698 266 EDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAK 325 (351)
Q Consensus 266 ~cP~c~~~~~~l~~~LP~~~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~ 325 (351)
.|..|...+..-..-.-....+|.. |.|..-+..++.. ++..-.|.+|++....++..
T Consensus 9 ~C~~C~~~I~~~~~v~a~g~~wH~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~cy~~~f~ 67 (192)
T 1b8t_A 9 KCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDST--TVAVHGDEIYCKSCYGKKYG 67 (192)
T ss_dssp ECTTTCCEECSSCCEEETTEEECTTTCBCTTTCCBCCSS--SEEEETTEEEEHHHHHHHHS
T ss_pred cCccCCCeecceeEEEeCCceecCCCCcCcccCCcCCCC--eeEecCCEeeChhhhHhhcC
Confidence 5777766543211101123455544 9999988888765 47788999999999988753
No 150
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.25 E-value=42 Score=23.13 Aligned_cols=31 Identities=23% Similarity=0.350 Sum_probs=19.2
Q ss_pred CCccchHHH-HHHHHH--hCCCceecCCCCcccC
Q 018698 311 NGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCN 341 (351)
Q Consensus 311 ~GhV~s~~a-l~~l~~--~~~~~~~CP~~~~~~~ 341 (351)
||..+.... |.+-.+ .+...++|++|++.|.
T Consensus 46 C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~ 79 (79)
T 2dlk_A 46 CGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG 79 (79)
T ss_dssp TCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred CcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence 788776544 332111 2345689999998873
No 151
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=37.30 E-value=10 Score=20.69 Aligned_cols=14 Identities=14% Similarity=0.254 Sum_probs=11.5
Q ss_pred eecCCCCcccCcCC
Q 018698 331 ITCPRTGLVCNYSD 344 (351)
Q Consensus 331 ~~CP~~~~~~~~~~ 344 (351)
+.|+.|++.|....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 2lvt_A 3 CQCVMCGKAFTQAS 16 (29)
Confidence 68999999997654
No 152
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.06 E-value=21 Score=20.59 Aligned_cols=15 Identities=7% Similarity=-0.122 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 8 LLYDCHICERKFKNE 22 (36)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCccCCH
Confidence 458999999998754
No 153
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=31.01 E-value=45 Score=22.15 Aligned_cols=35 Identities=17% Similarity=0.063 Sum_probs=22.3
Q ss_pred cCCccchHH-HHHHHHHh----CCCceecCCCCcccCcCC
Q 018698 310 PNGYVYSTK-ALEEMAKK----NNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 310 p~GhV~s~~-al~~l~~~----~~~~~~CP~~~~~~~~~~ 344 (351)
-||..|... .|..=.+. +...++|+.|++.|....
T Consensus 15 ~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~ 54 (66)
T 2drp_A 15 VCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKD 54 (66)
T ss_dssp TTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHH
T ss_pred CCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHH
Confidence 478887644 44432221 335699999999997543
No 154
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=30.40 E-value=14 Score=29.22 Aligned_cols=29 Identities=24% Similarity=0.360 Sum_probs=20.3
Q ss_pred CceeccCCccchHHHHHHHHHhCCCceecCCCCcccC
Q 018698 305 PPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 341 (351)
Q Consensus 305 pP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~ 341 (351)
||.-..||+++ . +..+...+||.|+.+.-
T Consensus 67 p~~C~~CG~~F----~----~~~~kPsrCP~CkSe~I 95 (105)
T 2gmg_A 67 PAQCRKCGFVF----K----AEINIPSRCPKCKSEWI 95 (105)
T ss_dssp CCBBTTTCCBC----C----CCSSCCSSCSSSCCCCB
T ss_pred CcChhhCcCee----c----ccCCCCCCCcCCCCCcc
Confidence 56668999999 1 12234589999997643
No 155
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=30.37 E-value=2.4e+02 Score=27.12 Aligned_cols=24 Identities=8% Similarity=0.119 Sum_probs=10.6
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhh
Q 018698 58 TIRTNHRAVEKEITSVISNVADVS 81 (351)
Q Consensus 58 ~fr~~qk~ieke~~~v~~~~~~~~ 81 (351)
..-.+.+.+.+.+..+.+.|.++.
T Consensus 57 ~Ldk~er~~~~rIe~L~~~L~~~s 80 (390)
T 1deq_A 57 LIDEVDQDFTSRINKLRDSLFNYQ 80 (390)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHH
Confidence 333333444444444444444443
No 156
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=29.92 E-value=22 Score=21.40 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=12.5
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 9 k~~~C~~C~k~f~~~ 23 (42)
T 2el5_A 9 NPYECSECGKAFNRK 23 (42)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCccCCCcChhhCCH
Confidence 458999999999764
No 157
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=29.80 E-value=20 Score=23.83 Aligned_cols=20 Identities=25% Similarity=0.202 Sum_probs=15.9
Q ss_pred HHHHHHHh--cCChHHHHHHHH
Q 018698 120 KKVIDALQ--NKEVAPALAWCS 139 (351)
Q Consensus 120 ~~I~~~L~--~~dl~~AL~W~~ 139 (351)
..++.+|+ +||++.|++|+-
T Consensus 23 ~~~~~AL~~~~gnv~~Ave~L~ 44 (46)
T 2bwb_A 23 DRNVAALRRSGGSVQGALDSLL 44 (46)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHH
Confidence 35677776 799999999974
No 158
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.80 E-value=23 Score=21.24 Aligned_cols=15 Identities=13% Similarity=0.275 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 10 k~~~C~~C~k~f~~~ 24 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQK 24 (42)
T ss_dssp CSBCCTTTTCCBSSH
T ss_pred CCeeCCCccchhCCH
Confidence 458999999999764
No 159
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=29.61 E-value=17 Score=20.87 Aligned_cols=13 Identities=23% Similarity=0.317 Sum_probs=11.0
Q ss_pred eecCCCCcccCcC
Q 018698 331 ITCPRTGLVCNYS 343 (351)
Q Consensus 331 ~~CP~~~~~~~~~ 343 (351)
+.|+.|++.|...
T Consensus 3 ~~C~~C~k~F~~~ 15 (33)
T 1rim_A 3 FACPECPKRFMRS 15 (33)
T ss_dssp CCCSSSCCCCSSH
T ss_pred ccCCCCCchhCCH
Confidence 6899999999754
No 160
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.46 E-value=24 Score=21.41 Aligned_cols=15 Identities=13% Similarity=0.140 Sum_probs=12.5
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (44)
T 2eof_A 11 KPYECNECQKAFNTK 25 (44)
T ss_dssp CSEECTTTCCEESCH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999764
No 161
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=29.30 E-value=23 Score=20.98 Aligned_cols=15 Identities=13% Similarity=0.060 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 5 k~~~C~~C~k~f~~~ 19 (39)
T 1njq_A 5 RSYTCSFCKREFRSA 19 (39)
T ss_dssp SSEECTTTCCEESSH
T ss_pred CceECCCCCcccCCH
Confidence 458999999998754
No 162
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=29.13 E-value=18 Score=31.68 Aligned_cols=9 Identities=22% Similarity=0.165 Sum_probs=6.4
Q ss_pred eecCCCCcc
Q 018698 331 ITCPRTGLV 339 (351)
Q Consensus 331 ~~CP~~~~~ 339 (351)
-+||.|+..
T Consensus 187 ~~CP~C~~~ 195 (202)
T 1yuz_A 187 EKCPICFRP 195 (202)
T ss_dssp SBCTTTCCB
T ss_pred CCCCCCCCC
Confidence 478888764
No 163
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.05 E-value=19 Score=21.22 Aligned_cols=15 Identities=7% Similarity=0.000 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 8 HLYYCSQCHYSSITK 22 (37)
T ss_dssp CEEECSSSSCEEECH
T ss_pred cCeECCCCCcccCCH
Confidence 458999999998754
No 164
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.02 E-value=97 Score=21.99 Aligned_cols=64 Identities=11% Similarity=0.092 Sum_probs=41.1
Q ss_pred ccCCCCCCCCCCchhhhcccCCCCCCCCCCCe-eeeeccccccCCCCCcee-ccCCccchHHHHHHHH
Q 018698 259 YEDDCTKEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQV-LPNGYVYSTKALEEMA 324 (351)
Q Consensus 259 ~~~~~~~~cP~c~~~~~~l~~~LP~~~~~hS~-~vCpis~e~~~e~NpP~~-Lp~GhV~s~~al~~l~ 324 (351)
|.......|+.|...+...... .....+|.. |.|..-+..+.+.. .+. ..+|.+|++..-.++.
T Consensus 10 y~~~~~~~C~~C~~~I~~~~~~-a~~~~~H~~CF~C~~C~~~L~~g~-~f~~~~~~~~~C~~c~~~~~ 75 (81)
T 1x6a_A 10 YWGKFGEFCHGCSLLMTGPFMV-AGEFKYHPECFACMSCKVIIEDGD-AYALVQHATLYCGKCHNEVV 75 (81)
T ss_dssp SSCCSSCBCTTTCCBCCSCCBC-CTTCCBCTTSCBCTTTCCBCCTTS-CEEECSSSCEEEHHHHHHHH
T ss_pred HhhhcCCcCccCCCCcCceEEE-ECCceeccccCCccCCCCccCCCC-cEEEeeCCEEECHHHHHHHh
Confidence 4333345688887765521111 123556644 99999998886533 355 4899999999887764
No 165
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.80 E-value=24 Score=21.11 Aligned_cols=15 Identities=13% Similarity=0.204 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 9 k~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 9 RVYECQECGKSFRQK 23 (41)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCCcCCH
Confidence 458999999999754
No 166
>3hkz_Y DNA-directed RNA polymerase subunit 13; archaea, metal-binding, nucleotidyltransferase, transcription, transferase, zinc, zinc-finger; 3.40A {Sulfolobus solfataricus}
Probab=28.66 E-value=39 Score=25.88 Aligned_cols=41 Identities=24% Similarity=0.341 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHHHHHhcCC--hHHHHHHHHhhhhHhhhCC
Q 018698 109 DLVDIEVFQEAKKVIDALQNKE--VAPALAWCSDNKSRLKKSK 149 (351)
Q Consensus 109 ~lvd~d~f~~~~~I~~~L~~~d--l~~AL~W~~enk~~L~k~~ 149 (351)
.+.|++.|.....|++-|.+|. +++|..-..+|.+...+..
T Consensus 37 SiqDIELL~KnTEIWdkLl~gkISIEEAKklFedn~~~y~kk~ 79 (104)
T 3hkz_Y 37 SIQDIELLMRNTEIWDNLLNGKITLEEAKKLFEDNYKEYEKRD 79 (104)
T ss_dssp -CCCTTHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHTTTTCCC
T ss_pred CHHHHHHHHhhhHHHHHHHcCcccHHHHHHHHHHHHHHHhhhh
Confidence 5779999999999999999985 5689999999887775554
No 167
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.56 E-value=24 Score=21.76 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enf_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 4589999999997643
No 168
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.43 E-value=24 Score=21.78 Aligned_cols=15 Identities=13% Similarity=0.224 Sum_probs=12.5
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|++|++.|...
T Consensus 11 ~~~~C~~C~k~F~~~ 25 (46)
T 2emi_A 11 RHYECSECGKAFIQK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCCCCCCCCcccCCH
Confidence 458999999999764
No 169
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.42 E-value=25 Score=21.05 Aligned_cols=16 Identities=6% Similarity=0.154 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (42)
T 2yte_A 9 KPYSCAECKETFSDNN 24 (42)
T ss_dssp CSCBCTTTCCBCSSHH
T ss_pred CCeECCCCCCccCCHH
Confidence 4589999999998643
No 170
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.38 E-value=24 Score=21.16 Aligned_cols=15 Identities=13% Similarity=0.129 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 10 k~~~C~~C~k~f~~~ 24 (42)
T 2en2_A 10 KPYKCETCGARFVQV 24 (42)
T ss_dssp CSEECTTTCCEESSH
T ss_pred CCEeCCCcChhhCCH
Confidence 458999999999764
No 171
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=28.20 E-value=17 Score=24.73 Aligned_cols=23 Identities=13% Similarity=0.180 Sum_probs=17.2
Q ss_pred HHHHHHHHh--cCChHHHHHHHHhh
Q 018698 119 AKKVIDALQ--NKEVAPALAWCSDN 141 (351)
Q Consensus 119 ~~~I~~~L~--~~dl~~AL~W~~en 141 (351)
..+++.+|+ +||++.|++|+-.|
T Consensus 27 ~~~~~~AL~~t~gn~e~A~e~L~~~ 51 (52)
T 2jy5_A 27 REANLQALIATGGDINAAIERLLGS 51 (52)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 346677776 68999999998543
No 172
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.00 E-value=24 Score=21.66 Aligned_cols=15 Identities=13% Similarity=0.131 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2yts_A 11 KPYICNECGKSFIQK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCEECCCCChhhCCh
Confidence 458999999998754
No 173
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.88 E-value=26 Score=21.53 Aligned_cols=16 Identities=13% Similarity=0.218 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eow_A 11 KPYKCNECGKAFRARS 26 (46)
T ss_dssp CCEECTTSCCEESSHH
T ss_pred CCeeccccCChhcCHH
Confidence 4589999999987643
No 174
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.87 E-value=25 Score=21.52 Aligned_cols=15 Identities=13% Similarity=0.295 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (44)
T 2epv_A 11 KPYECNECGKAFIWK 25 (44)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCCCCcccCch
Confidence 458999999999754
No 175
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=27.86 E-value=35 Score=26.75 Aligned_cols=52 Identities=13% Similarity=0.214 Sum_probs=40.7
Q ss_pred CCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcC
Q 018698 285 KQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 285 ~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 343 (351)
..+|.. |.|..-+..++.. ++....|.+|++..-.++. ..+|..|++.+...
T Consensus 24 ~~~H~~CF~C~~C~~~L~~~--~f~~~~g~~yC~~cy~~~~-----~~~C~~C~~~I~~~ 76 (126)
T 2xqn_T 24 QNWHLKHFCCFDCDSILAGE--IYVMVNDKPVCKPCYVKNH-----AVVCQGCHNAIDPE 76 (126)
T ss_dssp EEECGGGSBCTTTCCBCTTS--EEEEETTEEEEHHHHHHHS-----CCBCTTTCSBCCTT
T ss_pred CCccCCCCCcCCCCCCCCcC--EEEeECCEEechHHhCcCc-----CccCcccCCcCCcC
Confidence 345554 8999988888743 7888999999999998763 25899999988764
No 176
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.55 E-value=28 Score=21.16 Aligned_cols=16 Identities=13% Similarity=0.341 Sum_probs=13.1
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2yu5_A 11 NPFKCSKCDRVFTQRN 26 (44)
T ss_dssp CSEECSSSSCEESSSH
T ss_pred CCeECCCCCchhCCHH
Confidence 4589999999998654
No 177
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.21 E-value=26 Score=21.53 Aligned_cols=15 Identities=20% Similarity=0.390 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 11 NPFICSECGKVFTHK 25 (46)
T ss_dssp CSCBCTTTCCBCSSH
T ss_pred CCEECCccCcccCCH
Confidence 458999999999764
No 178
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=27.03 E-value=17 Score=29.77 Aligned_cols=76 Identities=9% Similarity=0.046 Sum_probs=48.4
Q ss_pred CCCCCCchhhhcccCCCCCCCCCC----------CeeeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecC
Q 018698 265 KEDPLSQESFRKLASPLPYSKQHH----------SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCP 334 (351)
Q Consensus 265 ~~cP~c~~~~~~l~~~LP~~~~~h----------S~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP 334 (351)
-.||+|...+.. +..+|-.|.|. +...||+-+......++=..+.-..++...++++... .-.+.||
T Consensus 32 ~~C~IC~~~~~~-pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~~~~~~d~~~~~~i~--~L~v~Cp 108 (141)
T 3knv_A 32 YLCSACRNVLRR-PFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVE--SLPAVCP 108 (141)
T ss_dssp GBCTTTCSBCSS-EEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCCTTTTEECGGGCEECHHHHHHHH--TSEEECC
T ss_pred cCCCCCChhhcC-cEECCCCCccCHHHHHHHHhcCCCCCCCCCCcccccccccccchhhhcccHHHHHHHc--ccccccC
Confidence 368999876543 24467777654 3368999888765443333455567777777776653 4579998
Q ss_pred C--CCcccCcC
Q 018698 335 R--TGLVCNYS 343 (351)
Q Consensus 335 ~--~~~~~~~~ 343 (351)
. |+......
T Consensus 109 n~GC~~~~~l~ 119 (141)
T 3knv_A 109 SDGCTWKGTLK 119 (141)
T ss_dssp STTCCCEEEHH
T ss_pred CCCCCCEeEHH
Confidence 5 65554443
No 179
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.85 E-value=24 Score=21.40 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..+.|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2en7_A 11 KPYVCNECGKAFRSKS 26 (44)
T ss_dssp SSSCCTTTCCCCSSHH
T ss_pred cCeECCCCCCccCCHH
Confidence 4589999999997643
No 180
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.75 E-value=27 Score=21.43 Aligned_cols=15 Identities=13% Similarity=0.206 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytf_A 11 KPFECSECQKAFNTK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCcCCCCCCcccCCH
Confidence 458999999998754
No 181
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.64 E-value=26 Score=21.58 Aligned_cols=15 Identities=13% Similarity=0.222 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq1_A 11 KPYKCNECGKAFRAH 25 (46)
T ss_dssp CCCCCTTTTCCCSSH
T ss_pred CCeECCcCChhhCCH
Confidence 458999999999754
No 182
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.63 E-value=27 Score=21.40 Aligned_cols=15 Identities=13% Similarity=0.204 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 11 KPYRCGECGKAFAQK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCccCCH
Confidence 458999999999764
No 183
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.56 E-value=28 Score=21.18 Aligned_cols=15 Identities=13% Similarity=0.346 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (44)
T 2emb_A 11 KRYECSKCQATFNLR 25 (44)
T ss_dssp SSEECTTTCCEESCH
T ss_pred CCeECCCCCCccCCH
Confidence 458999999999754
No 184
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=26.56 E-value=62 Score=24.05 Aligned_cols=12 Identities=17% Similarity=0.401 Sum_probs=6.4
Q ss_pred ceec--CCCCcccC
Q 018698 330 KITC--PRTGLVCN 341 (351)
Q Consensus 330 ~~~C--P~~~~~~~ 341 (351)
.++| |.|++.|.
T Consensus 94 ~~~C~~~~C~~~f~ 107 (119)
T 2jp9_A 94 PFSCRWPSCQKKFA 107 (119)
T ss_dssp CEECCSTTCCCEES
T ss_pred CeeCCCCCCccccC
Confidence 3555 55555554
No 185
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=26.38 E-value=27 Score=20.88 Aligned_cols=15 Identities=13% Similarity=0.191 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 10 ~~~~C~~C~k~f~~~ 24 (42)
T 2epc_A 10 TPYLCGQCGKSFTQR 24 (42)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999754
No 186
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.37 E-value=23 Score=21.55 Aligned_cols=16 Identities=25% Similarity=0.382 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2eoj_A 11 NPYECCECGKVFSRKD 26 (44)
T ss_dssp CSCEETTTTEECSSHH
T ss_pred cCeeCCCCCCccCCHH
Confidence 4589999999987643
No 187
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.36 E-value=52 Score=24.49 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=23.1
Q ss_pred cCCccc--hHHHHHHHHH-hCCCceecCCCCcccCcC
Q 018698 310 PNGYVY--STKALEEMAK-KNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 310 p~GhV~--s~~al~~l~~-~~~~~~~CP~~~~~~~~~ 343 (351)
-||..+ .+..|..-.+ .+...++|+.|++.|...
T Consensus 39 ~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~ 75 (96)
T 2ctd_A 39 TCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSL 75 (96)
T ss_dssp TTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSH
T ss_pred CCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCH
Confidence 489998 4556654222 244568999999999754
No 188
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=26.18 E-value=32 Score=21.13 Aligned_cols=17 Identities=12% Similarity=0.151 Sum_probs=13.5
Q ss_pred CceecCCCCcccCcCCc
Q 018698 329 GKITCPRTGLVCNYSDL 345 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~~ 345 (351)
..++|+.|++.|.....
T Consensus 11 k~~~C~~C~k~f~~~~~ 27 (46)
T 2ely_A 11 KPFKCVECGKGFSRRSA 27 (46)
T ss_dssp CSBCCSSSCCCBSSTTH
T ss_pred CCcccCccCcccCCHHH
Confidence 45899999999986543
No 189
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.11 E-value=64 Score=22.59 Aligned_cols=26 Identities=23% Similarity=0.475 Sum_probs=20.0
Q ss_pred HHHHHHHh--cCChHHHHHHHHhhhhHh
Q 018698 120 KKVIDALQ--NKEVAPALAWCSDNKSRL 145 (351)
Q Consensus 120 ~~I~~~L~--~~dl~~AL~W~~enk~~L 145 (351)
.+.+.+|+ ++|++.|++|+-+|....
T Consensus 24 ~~a~~AL~~t~~nve~A~e~L~~~~~d~ 51 (63)
T 2dak_A 24 DQALKALRATNNSLERAVDWIFSHIDDL 51 (63)
T ss_dssp HHHHHHHHHTTSCSHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCCCc
Confidence 46666776 579999999999886643
No 190
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=26.05 E-value=64 Score=23.14 Aligned_cols=33 Identities=9% Similarity=0.146 Sum_probs=21.2
Q ss_pred CCccchHHH-HHHHHH--hCCCceecCCCCcccCcC
Q 018698 311 NGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 311 ~GhV~s~~a-l~~l~~--~~~~~~~CP~~~~~~~~~ 343 (351)
||..+.... |.+=.+ .+...++|+.|++.|...
T Consensus 53 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 88 (100)
T 2ebt_A 53 CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRS 88 (100)
T ss_dssp CCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSH
T ss_pred CCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCH
Confidence 888876543 332111 234569999999999754
No 191
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.76 E-value=27 Score=21.51 Aligned_cols=15 Identities=13% Similarity=0.206 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em4_A 11 RPYECIECGKAFKTK 25 (46)
T ss_dssp SSEECSSSCCEESSH
T ss_pred cCcCCCCCCCccCCH
Confidence 458999999999764
No 192
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.74 E-value=32 Score=21.19 Aligned_cols=16 Identities=6% Similarity=0.007 Sum_probs=13.0
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 11 KPYECDVCRKAFSHHA 26 (46)
T ss_dssp SSCBCTTTCCBCSSSH
T ss_pred CCcCCCCcCchhCCHH
Confidence 4589999999998654
No 193
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=25.61 E-value=25 Score=26.01 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=17.2
Q ss_pred HHHHHHHh--cCChHHHHHHHHhh
Q 018698 120 KKVIDALQ--NKEVAPALAWCSDN 141 (351)
Q Consensus 120 ~~I~~~L~--~~dl~~AL~W~~en 141 (351)
..++.+|+ +||++.|++|+-.+
T Consensus 45 ~~~~~AL~~t~Gnve~Ave~L~~~ 68 (74)
T 1vej_A 45 DANLQALVATDGDIHAAIEMLLGA 68 (74)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 36667776 69999999998765
No 194
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=25.59 E-value=28 Score=21.43 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emj_A 11 KPFECAECGKSFSIS 25 (46)
T ss_dssp CSEECSSSSCEESSH
T ss_pred CCEECCCCCcccCCH
Confidence 458999999999754
No 195
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=25.59 E-value=64 Score=23.09 Aligned_cols=22 Identities=18% Similarity=0.338 Sum_probs=16.8
Q ss_pred HHHHHh--cCChHHHHHHHHhhhh
Q 018698 122 VIDALQ--NKEVAPALAWCSDNKS 143 (351)
Q Consensus 122 I~~~L~--~~dl~~AL~W~~enk~ 143 (351)
..++|. +||++.|+.|+.+...
T Consensus 27 cKkAL~e~~GDi~~Ai~~Lr~kg~ 50 (64)
T 2cp9_A 27 CKKALETCGGDLKQAEIWLHKEAQ 50 (64)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhH
Confidence 445565 7999999999987653
No 196
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=25.57 E-value=59 Score=20.72 Aligned_cols=22 Identities=23% Similarity=0.336 Sum_probs=16.1
Q ss_pred HHHHHHHh--cCChHHHHHHHHhh
Q 018698 120 KKVIDALQ--NKEVAPALAWCSDN 141 (351)
Q Consensus 120 ~~I~~~L~--~~dl~~AL~W~~en 141 (351)
.+.+.+|+ ++|++.|++|+-+|
T Consensus 19 ~~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 19 EEAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcCHHHHHHHHHcC
Confidence 34555665 68999999998654
No 197
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.56 E-value=25 Score=21.65 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2yti_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CTTCCSSSCCCCSSHH
T ss_pred cCeECCCCCcccCChh
Confidence 4589999999997643
No 198
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.51 E-value=29 Score=21.31 Aligned_cols=15 Identities=13% Similarity=0.233 Sum_probs=12.5
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ep3_A 11 KPYRCAECGKAFTDR 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCCchhCCH
Confidence 458999999999764
No 199
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.50 E-value=29 Score=21.39 Aligned_cols=15 Identities=13% Similarity=0.122 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2en9_A 11 KLFKCNECKKTFTQS 25 (46)
T ss_dssp CCCBCTTTCCBCSSH
T ss_pred CCEECCccCcccCCH
Confidence 458999999999754
No 200
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.49 E-value=29 Score=21.36 Aligned_cols=15 Identities=13% Similarity=0.277 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2ytp_A 11 RHYECSECGKAFARK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCcCCcccCCH
Confidence 458999999999754
No 201
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.40 E-value=32 Score=21.15 Aligned_cols=16 Identities=13% Similarity=0.198 Sum_probs=13.0
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eoy_A 11 KCFKCNKCEKTFSCSK 26 (46)
T ss_dssp CCEECSSSCCEESSSH
T ss_pred CCEECcCCCCcCCCHH
Confidence 4589999999998654
No 202
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.39 E-value=29 Score=21.47 Aligned_cols=16 Identities=19% Similarity=0.256 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eon_A 11 KPYKCQVCGKAFRVSS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cccCCCCCCcccCcHH
Confidence 4589999999998643
No 203
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=25.27 E-value=2.9e+02 Score=22.93 Aligned_cols=77 Identities=16% Similarity=0.303 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHHHHHHh-------hccCCCChHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHh----cCCh
Q 018698 63 HRAVEKEITSVISNVADV-------SDSENFSKDDAVNHLTSLVSRLQGLKRKDLVDIEVFQEAKKVIDALQ----NKEV 131 (351)
Q Consensus 63 qk~ieke~~~v~~~~~~~-------~k~~~~~~~~~~~~l~~~i~rl~~lkrk~lvd~d~f~~~~~I~~~L~----~~dl 131 (351)
++.+++++......+..+ ...+....+.+...++.+-.|-..|... .-....++.+++. .+++
T Consensus 45 h~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~------~~~R~~~Le~~~~l~qf~~~~ 118 (216)
T 1u5p_A 45 HQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSM------AAARRAKLNESHRLHQFFRDM 118 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 344555544443333333 3233455666777777777776665433 1122223333333 4578
Q ss_pred HHHHHHHHhhhhHh
Q 018698 132 APALAWCSDNKSRL 145 (351)
Q Consensus 132 ~~AL~W~~enk~~L 145 (351)
++.+.|+.+..+.+
T Consensus 119 ~~~~~Wl~e~e~~~ 132 (216)
T 1u5p_A 119 DDEESWIKEKKLLV 132 (216)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHh
Confidence 89999999976654
No 204
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=25.19 E-value=64 Score=23.05 Aligned_cols=21 Identities=14% Similarity=0.300 Sum_probs=16.5
Q ss_pred HHHHHHh--cCChHHHHHHHHhh
Q 018698 121 KVIDALQ--NKEVAPALAWCSDN 141 (351)
Q Consensus 121 ~I~~~L~--~~dl~~AL~W~~en 141 (351)
+...+|+ ++|++.|++|+=.|
T Consensus 35 qA~kALKat~~NvErAaDWLFSH 57 (63)
T 1wgn_A 35 CVLRAMKKKGENIEQILDYLFAH 57 (63)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHhC
Confidence 4555665 68999999998776
No 205
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.17 E-value=33 Score=20.95 Aligned_cols=16 Identities=13% Similarity=0.324 Sum_probs=13.0
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2epw_A 11 KPCKCTECGKAFCWKS 26 (46)
T ss_dssp CSEECSSSCCEESSSH
T ss_pred CCeeCCCCCCccCCHH
Confidence 4589999999998653
No 206
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.10 E-value=25 Score=21.66 Aligned_cols=16 Identities=19% Similarity=0.225 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eoz_A 11 KPYSCNVCGKAFVLSA 26 (46)
T ss_dssp CSEEETTTTEEESSHH
T ss_pred CCeECcccChhhCCHH
Confidence 4589999999997643
No 207
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=25.03 E-value=18 Score=20.57 Aligned_cols=13 Identities=23% Similarity=0.291 Sum_probs=10.7
Q ss_pred eecCCCCcccCcC
Q 018698 331 ITCPRTGLVCNYS 343 (351)
Q Consensus 331 ~~CP~~~~~~~~~ 343 (351)
++|+.|++.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (32)
T 2kfq_A 3 FACPACPKRFMRS 15 (32)
T ss_dssp SSSSSSCTTHHHH
T ss_pred CCCCCCCcccCCH
Confidence 6899999998754
No 208
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.02 E-value=29 Score=21.34 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ene_A 11 KPYKCNECGKVFRHNS 26 (46)
T ss_dssp SSEECSSSCCEESSHH
T ss_pred CCeECCCCCchhCChH
Confidence 4589999999997643
No 209
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.99 E-value=29 Score=21.22 Aligned_cols=15 Identities=13% Similarity=0.361 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eov_A 11 KPYKCSDCGKSFTWK 25 (46)
T ss_dssp CSCBCSSSCCBCSSH
T ss_pred CCccCCccChhhCCH
Confidence 458999999999764
No 210
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.96 E-value=30 Score=21.28 Aligned_cols=15 Identities=7% Similarity=0.056 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~F~~~ 25 (46)
T 2em3_A 11 KPYECKVCSKAFTQK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCCCCcccCCH
Confidence 458999999999764
No 211
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.92 E-value=32 Score=21.07 Aligned_cols=15 Identities=13% Similarity=0.186 Sum_probs=12.5
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eor_A 11 KPYNCEECGKAFIHD 25 (46)
T ss_dssp CSEECTTTCCEESSH
T ss_pred cCccCCCCCCCcCCH
Confidence 458999999999754
No 212
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.91 E-value=30 Score=21.15 Aligned_cols=15 Identities=20% Similarity=0.279 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 11 KPYVCDYCGKAFGLS 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCChhhCCH
Confidence 458999999999764
No 213
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=24.86 E-value=20 Score=25.55 Aligned_cols=48 Identities=17% Similarity=0.147 Sum_probs=34.9
Q ss_pred CCCCCe-eeeeccccccCCCCCceeccCCccchH-HHHHHHHHhCCCceecCCCCcc
Q 018698 285 KQHHSK-LVCYITKELMDTENPPQVLPNGYVYST-KALEEMAKKNNGKITCPRTGLV 339 (351)
Q Consensus 285 ~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~-~al~~l~~~~~~~~~CP~~~~~ 339 (351)
..+|.. |.|..=+..++.. ++...+|.+|++ ....++. ..+|-.|+..
T Consensus 21 ~~~H~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~~cy~~~f-----~~~C~~C~~~ 70 (76)
T 1iml_A 21 KDWHRPCLKCEKCGKTLTSG--GHAEHEGKPYCNHPCYSAMF-----GPKGFGRGGA 70 (76)
T ss_dssp EEEETTTCBCTTTCCBCCTT--TEEEETTEEEETTTHHHHHS-----SCCCSSCCCS
T ss_pred ccccCCCCCccccCccCCCC--ceECcCCeEeeCHHHHHHHh-----CccCCCcCCc
Confidence 445544 8999888888765 577899999998 4776663 2478888754
No 214
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.77 E-value=30 Score=21.25 Aligned_cols=17 Identities=12% Similarity=0.217 Sum_probs=13.2
Q ss_pred CCceecCCCCcccCcCC
Q 018698 328 NGKITCPRTGLVCNYSD 344 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~ 344 (351)
...++|+.|++.|....
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (46)
T 2eml_A 10 EKPYECSVCGKAFSHRQ 26 (46)
T ss_dssp CCSEECSSSCCEESSHH
T ss_pred CCCeeCCCcCCccCCHH
Confidence 34589999999997643
No 215
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.72 E-value=34 Score=20.95 Aligned_cols=16 Identities=19% Similarity=0.428 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2en3_A 11 KPFQCKECGMNFSWSC 26 (46)
T ss_dssp CSEECSSSCCEESSSH
T ss_pred CCeeCcccChhhCCHH
Confidence 4589999999997653
No 216
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.64 E-value=30 Score=20.73 Aligned_cols=15 Identities=13% Similarity=0.098 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 10 k~~~C~~C~k~f~~~ 24 (42)
T 2eos_A 10 KPYPCEICGTRFRHL 24 (42)
T ss_dssp CCBCCSSSCCCBSSH
T ss_pred CCEECCCCCCccCCH
Confidence 458999999999864
No 217
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.59 E-value=25 Score=21.56 Aligned_cols=15 Identities=13% Similarity=0.279 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq3_A 11 KPYECNQCGKAFSVR 25 (46)
T ss_dssp CSSEETTTTEECSSH
T ss_pred CCeECCCCChhhCCH
Confidence 458999999999764
No 218
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.57 E-value=31 Score=20.96 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (44)
T 2eox_A 11 KSYNCNECGKAFTRIF 26 (44)
T ss_dssp CCEEETTTTEEESSSH
T ss_pred CCeECcccCcccCCHH
Confidence 4589999999997653
No 219
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.56 E-value=31 Score=21.22 Aligned_cols=15 Identities=20% Similarity=0.158 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em6_A 11 KCYKCDVCGKEFSQS 25 (46)
T ss_dssp CCCBCSSSCCBCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999754
No 220
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=24.55 E-value=63 Score=22.40 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=15.0
Q ss_pred HHHHHHh---cCChHHHHHHHHh
Q 018698 121 KVIDALQ---NKEVAPALAWCSD 140 (351)
Q Consensus 121 ~I~~~L~---~~dl~~AL~W~~e 140 (351)
+.+.+|+ +..+++|++|+..
T Consensus 25 rae~Alk~Tg~~Gle~AmewL~k 47 (54)
T 2cos_A 25 MAGRALKQTGSRSIEAALEYISK 47 (54)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHH
Confidence 6667776 3459999999864
No 221
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=24.48 E-value=2.4e+02 Score=21.65 Aligned_cols=53 Identities=9% Similarity=-0.096 Sum_probs=34.6
Q ss_pred HHhcCChHHHHHHHHhhhhHhhhCCCcchhhchhHHHHHHHhcCChHHHHHHHHHhCc
Q 018698 125 ALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLA 182 (351)
Q Consensus 125 ~L~~~dl~~AL~W~~enk~~L~k~~S~LEF~Lr~q~fIeLir~~~~~eAI~yark~l~ 182 (351)
.++.|+.+.|+.+|..--. + ... ....+...=.-+...|++.+|+.+.++-+.
T Consensus 73 ~~~~~~~~~A~~~~~~al~-~--~p~--~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 73 YLNIGDLHEAEETSSEVLK-R--EET--NEKALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHTCHHHHHHHHHHHHH-H--STT--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHh-c--CCc--chHHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 4457999999999875421 1 112 233334444455677999999999987654
No 222
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.47 E-value=28 Score=21.34 Aligned_cols=15 Identities=13% Similarity=0.147 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ep1_A 11 KPYECSDCGKSFIKK 25 (46)
T ss_dssp CSSCCSSSCCCCSSH
T ss_pred CCcCCCCCCchhCCH
Confidence 458999999999754
No 223
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.46 E-value=31 Score=21.25 Aligned_cols=15 Identities=13% Similarity=0.255 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2yto_A 11 KPYKCSDCGKAFTRK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCEECcccCCccCCH
Confidence 458999999999764
No 224
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.40 E-value=31 Score=21.20 Aligned_cols=15 Identities=13% Similarity=0.301 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em2_A 11 KPFKCKECGKAFRQN 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCEECCcCCchhCCH
Confidence 458999999999764
No 225
>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A
Probab=24.38 E-value=98 Score=26.89 Aligned_cols=53 Identities=19% Similarity=0.183 Sum_probs=38.5
Q ss_pred CChHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHh
Q 018698 86 FSKDDAVNHLTSLVSRLQGLKRKDLVDIEVFQEAKKVIDALQNKEVAPALAWCSD 140 (351)
Q Consensus 86 ~~~~~~~~~l~~~i~rl~~lkrk~lvd~d~f~~~~~I~~~L~~~dl~~AL~W~~e 140 (351)
+.....-..|.-.+.||..+++|.- .-.-...+.|.+-|++|..+.|.-+++.
T Consensus 8 ~~~~K~K~~Lklai~Rl~ll~~Kk~--~~~k~~RrdIA~LL~~gk~~~AriRvE~ 60 (191)
T 3frr_A 8 FKAERLRVNLRLVINRLKLLEKKKT--ELAQKARKEIADYLAAGKDERARIRVEH 60 (191)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 4444455677788889988887731 1234467889999999999999888754
No 226
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.26 E-value=36 Score=20.84 Aligned_cols=16 Identities=19% Similarity=0.235 Sum_probs=13.0
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 11 KPFKCGECGKSYNQRV 26 (46)
T ss_dssp CSEECTTTCCEESSSH
T ss_pred CCeECCCCCcccCCHH
Confidence 4589999999998654
No 227
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.25 E-value=28 Score=21.41 Aligned_cols=15 Identities=13% Similarity=0.281 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq2_A 11 KPYQCNECGKAFSQT 25 (46)
T ss_dssp CSSSCCSSCCCCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999764
No 228
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.24 E-value=31 Score=21.25 Aligned_cols=16 Identities=13% Similarity=0.254 Sum_probs=12.7
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..+.|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yth_A 11 KPFQCEECGKRFTQNS 26 (46)
T ss_dssp SSBCCSSSCCCBSSHH
T ss_pred cCCCCCCCCcccCCHH
Confidence 4589999999997643
No 229
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=24.21 E-value=27 Score=21.61 Aligned_cols=16 Identities=13% Similarity=0.389 Sum_probs=12.9
Q ss_pred CCceecCCCCcccCcC
Q 018698 328 NGKITCPRTGLVCNYS 343 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~ 343 (351)
..-++|+.|++.|...
T Consensus 6 ekp~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSP 21 (36)
T ss_dssp CCCCEETTTTEECSCH
T ss_pred ccCeECCCCCCccCCH
Confidence 3458999999999864
No 230
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.20 E-value=33 Score=21.02 Aligned_cols=16 Identities=13% Similarity=0.169 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emh_A 11 RPYICTVCGKAFTDRS 26 (46)
T ss_dssp CSEECTTTCCEESSHH
T ss_pred CCcCCCCCCchhCCHH
Confidence 4589999999997643
No 231
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.13 E-value=31 Score=21.21 Aligned_cols=15 Identities=13% Similarity=0.180 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|++|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2em5_A 11 KSHQCHECGRGFTLK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCcCCCccCCH
Confidence 458999999999754
No 232
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.08 E-value=31 Score=21.25 Aligned_cols=16 Identities=13% Similarity=0.314 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emf_A 11 KHFECTECGKAFTRKS 26 (46)
T ss_dssp CCEECSSSCCEESCHH
T ss_pred CCeECCCCCchhCCHH
Confidence 4589999999997643
No 233
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.08 E-value=33 Score=20.95 Aligned_cols=15 Identities=13% Similarity=0.359 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eop_A 11 KPHECRECGKSFSFN 25 (46)
T ss_dssp CSCBCTTTCCBCSSH
T ss_pred CCeeCCCCCchhCCH
Confidence 458999999999764
No 234
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.04 E-value=49 Score=22.85 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=21.6
Q ss_pred cCCccchHHH-HHHHHHh--CCCceecCCCCcccCcCC
Q 018698 310 PNGYVYSTKA-LEEMAKK--NNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 310 p~GhV~s~~a-l~~l~~~--~~~~~~CP~~~~~~~~~~ 344 (351)
-||..|.... |.+=.+. +...++|++|++.|....
T Consensus 23 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~ 60 (77)
T 2cot_A 23 ECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60 (77)
T ss_dssp SSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHH
T ss_pred CCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHH
Confidence 4777776544 3332221 234589999999987543
No 235
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.94 E-value=33 Score=21.07 Aligned_cols=15 Identities=13% Similarity=0.124 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em7_A 11 KPYKCEECGKGFICR 25 (46)
T ss_dssp CSEECSSSCCEESCH
T ss_pred cCccCCCccchhCCH
Confidence 468999999998764
No 236
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.87 E-value=83 Score=21.09 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=22.5
Q ss_pred ccCCccchHHHH-HHHHHh--CCCceecCCCCcccCcC
Q 018698 309 LPNGYVYSTKAL-EEMAKK--NNGKITCPRTGLVCNYS 343 (351)
Q Consensus 309 Lp~GhV~s~~al-~~l~~~--~~~~~~CP~~~~~~~~~ 343 (351)
--||..|....- .+=.+. +...++|++|++.|...
T Consensus 13 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~ 50 (70)
T 1x5w_A 13 SECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQP 50 (70)
T ss_dssp SSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSH
T ss_pred CCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCH
Confidence 348888875544 332221 23459999999999754
No 237
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.84 E-value=33 Score=21.02 Aligned_cols=16 Identities=13% Similarity=0.137 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (47)
T 2epx_A 11 KPYECIECGKAFIQNT 26 (47)
T ss_dssp CSBCCSSSCCCBSSHH
T ss_pred CCEECCccCchhCChH
Confidence 4589999999998643
No 238
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=23.83 E-value=33 Score=20.99 Aligned_cols=15 Identities=13% Similarity=0.381 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em9_A 11 KPYNCKECGKSFRWA 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCccccccCCh
Confidence 458999999999754
No 239
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.79 E-value=32 Score=21.10 Aligned_cols=17 Identities=12% Similarity=0.266 Sum_probs=13.2
Q ss_pred CCceecCCCCcccCcCC
Q 018698 328 NGKITCPRTGLVCNYSD 344 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~ 344 (351)
...+.|+.|++.|....
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytj_A 10 EKPYICAECGKAFTIRS 26 (46)
T ss_dssp CCSEECSSSCCEESSHH
T ss_pred CcCeECCCCChhhCCHH
Confidence 34589999999997643
No 240
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.76 E-value=34 Score=20.95 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=13.2
Q ss_pred CCceecCCCCcccCcCC
Q 018698 328 NGKITCPRTGLVCNYSD 344 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~~ 344 (351)
...++|+.|++.|....
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRNS 26 (46)
T ss_dssp CCCEECTTTCCEESSHH
T ss_pred CCCeECCCCCchhCCHH
Confidence 34589999999997643
No 241
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.75 E-value=31 Score=21.14 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2ytk_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCEeCCcCCCccCCHH
Confidence 4589999999997643
No 242
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=23.75 E-value=32 Score=21.75 Aligned_cols=15 Identities=13% Similarity=0.164 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 6 kp~~C~~C~k~F~~~ 20 (48)
T 3iuf_A 6 KPYACDICGKRYKNR 20 (48)
T ss_dssp SCEECTTTCCEESSH
T ss_pred cCEECCCcCcccCCH
Confidence 458999999999754
No 243
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.74 E-value=32 Score=21.15 Aligned_cols=15 Identities=13% Similarity=0.153 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em8_A 11 KPYKCVECGKGYKRR 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECcccCchhCCH
Confidence 468999999999754
No 244
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.73 E-value=30 Score=21.27 Aligned_cols=15 Identities=7% Similarity=-0.040 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 11 KPYECKECRKTFIQI 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCcCCCCcCchhCCH
Confidence 458999999999764
No 245
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.69 E-value=72 Score=22.50 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=18.9
Q ss_pred HHHHHHHh--cCChHHHHHHHHhhhhH
Q 018698 120 KKVIDALQ--NKEVAPALAWCSDNKSR 144 (351)
Q Consensus 120 ~~I~~~L~--~~dl~~AL~W~~enk~~ 144 (351)
.+.+.+|+ ++|++.|++|+-+|...
T Consensus 24 ~~a~~AL~~~~~nve~A~e~L~~~~~~ 50 (63)
T 1wji_A 24 EASRQALMDNGNNLEAALNVLLTSNKQ 50 (63)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHCCCC
Confidence 35566776 57999999999887543
No 246
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.67 E-value=34 Score=21.00 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSCBCTTTCCBCSSHH
T ss_pred cCeECCCCCCeeCCHH
Confidence 4589999999997643
No 247
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=23.59 E-value=33 Score=21.00 Aligned_cols=16 Identities=6% Similarity=0.179 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2el4_A 11 KPYGCSQCAKTFSLKS 26 (46)
T ss_dssp CSEECSSSSCEESSHH
T ss_pred CceECCCCCchhCCHH
Confidence 4589999999997643
No 248
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.53 E-value=30 Score=21.23 Aligned_cols=15 Identities=13% Similarity=0.091 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|++|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eoq_A 11 KPFKCDICGKSFCGR 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCcCCCcCCchhCCH
Confidence 458999999999754
No 249
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.52 E-value=35 Score=20.89 Aligned_cols=16 Identities=13% Similarity=0.113 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2epz_A 11 KPFDCIDCGKAFSDHI 26 (46)
T ss_dssp CSBCCTTTCCCBSSHH
T ss_pred CCeECCCCCceeCCHH
Confidence 4589999999997643
No 250
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.48 E-value=34 Score=20.90 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2en8_A 11 KSHTCDECGKNFCYI 25 (46)
T ss_dssp SSEECTTTCCEESSH
T ss_pred CCeECCCcCcccCCH
Confidence 458999999999754
No 251
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=23.48 E-value=33 Score=22.15 Aligned_cols=16 Identities=31% Similarity=0.316 Sum_probs=12.9
Q ss_pred CCceecCCCCcccCcC
Q 018698 328 NGKITCPRTGLVCNYS 343 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~ 343 (351)
...+.|+.|++.|...
T Consensus 22 ~k~~~C~~C~k~f~~~ 37 (54)
T 1yui_A 22 EQPATCPICYAVIRQS 37 (54)
T ss_dssp SCCEECTTTCCEESSH
T ss_pred CCCccCCCCCcccCCH
Confidence 4568999999998754
No 252
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.47 E-value=52 Score=24.81 Aligned_cols=29 Identities=21% Similarity=0.266 Sum_probs=22.1
Q ss_pred HHHHHHHh--cCChHHHHHHHHhhhhHhhhC
Q 018698 120 KKVIDALQ--NKEVAPALAWCSDNKSRLKKS 148 (351)
Q Consensus 120 ~~I~~~L~--~~dl~~AL~W~~enk~~L~k~ 148 (351)
.+.+.+|+ ++|++.|++|+-+|...+.+.
T Consensus 36 ~~a~~AL~~~n~n~e~A~ewL~~h~~D~D~~ 66 (85)
T 2dkl_A 36 EPAEEALKSNNMNLDQAMSALLEKKVDVDKR 66 (85)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTSCCSSCC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHCcCCcccc
Confidence 35666665 579999999999998776543
No 253
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.47 E-value=34 Score=21.05 Aligned_cols=15 Identities=13% Similarity=0.157 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2eoo_A 11 RPYGCNECGKNFGRH 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCEEccccCcccCCH
Confidence 458999999999764
No 254
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.44 E-value=32 Score=20.93 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..+.|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (44)
T 2eou_A 11 TTSECQECGKIFRHS 25 (44)
T ss_dssp CCCCCTTTCCCCSSH
T ss_pred cCeECCCCCcccCCH
Confidence 458999999999754
No 255
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.39 E-value=34 Score=20.92 Aligned_cols=16 Identities=19% Similarity=0.146 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2emm_A 11 RPHKCNECGKSFIQSA 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeeCCCCChhhCCHH
Confidence 4589999999997643
No 256
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.29 E-value=29 Score=21.26 Aligned_cols=15 Identities=13% Similarity=0.264 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (45)
T 2epu_A 11 KPFECTHCGKSFRAK 25 (45)
T ss_dssp CSEEETTTTEEESSH
T ss_pred cCccCCCCCCccCCh
Confidence 458999999998754
No 257
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.26 E-value=33 Score=20.81 Aligned_cols=16 Identities=6% Similarity=0.073 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (44)
T 2emx_A 9 KPFGCSCCEKAFSSKS 24 (44)
T ss_dssp CCEECSSSSCEESSHH
T ss_pred cCccCCCCCcccCCHH
Confidence 4589999999997643
No 258
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=23.21 E-value=76 Score=22.36 Aligned_cols=25 Identities=20% Similarity=0.469 Sum_probs=19.4
Q ss_pred HHHHHHHh---cCChHHHHHHHHhhhhH
Q 018698 120 KKVIDALQ---NKEVAPALAWCSDNKSR 144 (351)
Q Consensus 120 ~~I~~~L~---~~dl~~AL~W~~enk~~ 144 (351)
.+++.+|+ ++|++.|++|+-+|...
T Consensus 24 ~~a~~AL~~t~~~nve~A~ewLl~~~~d 51 (64)
T 1whc_A 24 GRAEKALALTGNQGIEAAMDWLMEHEDD 51 (64)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHhCCCC
Confidence 46666766 57999999999988653
No 259
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=23.17 E-value=74 Score=26.36 Aligned_cols=71 Identities=13% Similarity=0.036 Sum_probs=45.1
Q ss_pred CCCCCchhhhcccCCCCCCCCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHHHhCCCceecCCCCcccCcCC
Q 018698 266 EDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 344 (351)
Q Consensus 266 ~cP~c~~~~~~l~~~LP~~~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 344 (351)
.|..|...+..-.+-.-....+|.. |.|..-+..+++.. + .-+|.+|++..-.++.. .+|..|++.....+
T Consensus 8 ~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~--f-~~~g~~yC~~~y~~~f~-----~~C~~C~~~I~~~~ 79 (169)
T 2rgt_A 8 MCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERC--F-SRGESVYCKDDFFKRFG-----TKCAACQLGIPPTQ 79 (169)
T ss_dssp BBSSSSSBCCSSSCEECSSCEECTTTSBCTTTCCBCCSCC--E-ESSSCEECHHHHHHHHS-----CBCTTTCCBCCTTS
T ss_pred ccccCCCccCCcEEEEECCcEEccccCccCCCCCcCCCCC--c-ccCCeeeeccccccccc-----ccccccccccCCCc
Confidence 4666655443211000123445544 89999898887754 5 57999999999888752 47888877665543
No 260
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.15 E-value=32 Score=21.24 Aligned_cols=15 Identities=13% Similarity=0.153 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2eom_A 11 RGHRCSDCGKFFLQA 25 (46)
T ss_dssp SSCCCSSSCCCCSSH
T ss_pred CCcCCCCCCCeeCCh
Confidence 458999999999764
No 261
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.11 E-value=63 Score=23.77 Aligned_cols=59 Identities=10% Similarity=0.146 Sum_probs=39.4
Q ss_pred CCCCCCCchhhhcccCCCCCCCCCCC-eeeeeccccccCCCCCceeccCCccchHHHHHHHH
Q 018698 264 TKEDPLSQESFRKLASPLPYSKQHHS-KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 324 (351)
Q Consensus 264 ~~~cP~c~~~~~~l~~~LP~~~~~hS-~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~ 324 (351)
...|+.|...+.+...-......+|. -|.|..-+..++..+ +...+|.+|++....++.
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~~~--~~~~~g~~yC~~~y~~~f 74 (91)
T 2d8y_A 15 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGT--YASLHGRIYCKPHFNQLF 74 (91)
T ss_dssp SCBCTTTCCBCCTTSEEECSSSEEETTTCBCTTTCCBCCTTT--CCCSSSCCCCHHHHHHHS
T ss_pred CCcCccCCCccCCceeEEECCCEECCCCCeeCCCCCCCCCCC--cEeECCEEECHHHHHHHh
Confidence 35688887765432111122344554 489988888887653 778899999999988764
No 262
>2p22_B Vacuolar protein sorting-associated protein 28; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae}
Probab=23.11 E-value=1.4e+02 Score=23.90 Aligned_cols=54 Identities=19% Similarity=0.369 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhhcc---CCCChHHHHHHHHHHHHHHHhhhh--------cCCCCHHHHHHHHHH
Q 018698 69 EITSVISNVADVSDS---ENFSKDDAVNHLTSLVSRLQGLKR--------KDLVDIEVFQEAKKV 122 (351)
Q Consensus 69 e~~~v~~~~~~~~k~---~~~~~~~~~~~l~~~i~rl~~lkr--------k~lvd~d~f~~~~~I 122 (351)
|+-.|+.++..++|+ ..++.++......++|.+-+.+.+ +++.|++.|.+..++
T Consensus 42 eLYSII~tle~LEKAyikD~It~~eYt~~C~rLL~QYKt~~~~~~~~~v~~~~~dle~F~~~y~l 106 (118)
T 2p22_B 42 EIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEAFADTYNI 106 (118)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHTTTTTC-----------------
T ss_pred HHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcccHHHHHHHCCCHHHHHHHhCC
Confidence 455677778888883 458888999999999998765555 245566666665544
No 263
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.09 E-value=35 Score=20.93 Aligned_cols=15 Identities=13% Similarity=0.173 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ep2_A 11 KPYECSICGKSFTKK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCcCCCCCCcccCCH
Confidence 458999999998764
No 264
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.06 E-value=33 Score=21.11 Aligned_cols=16 Identities=13% Similarity=0.196 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2emz_A 11 RPFKCNECGKGFGRRS 26 (46)
T ss_dssp CSCCCSSSCCCCSSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 4589999999997643
No 265
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=23.02 E-value=17 Score=30.40 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=16.3
Q ss_pred ccCCccchHHHHHHHHHhCCCceecCCCCccc
Q 018698 309 LPNGYVYSTKALEEMAKKNNGKITCPRTGLVC 340 (351)
Q Consensus 309 Lp~GhV~s~~al~~l~~~~~~~~~CP~~~~~~ 340 (351)
..|||+|... .....||.||...
T Consensus 136 ~~Cg~~~~~~---------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 136 IGCGRKFSTL---------PPGGVCPDCGSKV 158 (165)
T ss_dssp SSSCCEESSC---------CGGGBCTTTCCBE
T ss_pred CCCCCcccCC---------CCCCcCCCCCCcc
Confidence 5788888543 2246999999864
No 266
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.93 E-value=65 Score=21.05 Aligned_cols=22 Identities=14% Similarity=0.253 Sum_probs=16.4
Q ss_pred HHHHHHHh-cCChHHHHHHHHhh
Q 018698 120 KKVIDALQ-NKEVAPALAWCSDN 141 (351)
Q Consensus 120 ~~I~~~L~-~~dl~~AL~W~~en 141 (351)
.+.+.+|+ .||++.|++|+-+|
T Consensus 24 ~~a~~AL~~~~n~e~A~~~L~~h 46 (47)
T 2ekk_A 24 EHAMEALLNTSTMEQATEYLLTH 46 (47)
T ss_dssp HHHHHHHHHSCSHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHcC
Confidence 45566665 46999999998765
No 267
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.77 E-value=34 Score=20.98 Aligned_cols=15 Identities=13% Similarity=0.275 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emy_A 11 NPYECHECGKAFSRK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred cCcCCCCCCcccCcH
Confidence 458999999999754
No 268
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.64 E-value=70 Score=21.36 Aligned_cols=35 Identities=9% Similarity=0.080 Sum_probs=23.8
Q ss_pred ccCCccchHHHHHHHHH-hCCCceecC-CCCcccCcC
Q 018698 309 LPNGYVYSTKALEEMAK-KNNGKITCP-RTGLVCNYS 343 (351)
Q Consensus 309 Lp~GhV~s~~al~~l~~-~~~~~~~CP-~~~~~~~~~ 343 (351)
--||..+.+..|..-.+ .+...++|+ .|++.|...
T Consensus 14 ~~C~k~f~~~~L~~H~~~~~~~p~~C~~~C~k~f~~~ 50 (66)
T 2eod_A 14 TYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAR 50 (66)
T ss_dssp SSSCCEEEHHHHHHHHHHCSSSEEECTTCCSCCEEET
T ss_pred cccCCccCHHHHHHHHHHcCCcCccCCcccCcccccH
Confidence 34888888666654322 234468999 999998654
No 269
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.57 E-value=35 Score=20.97 Aligned_cols=16 Identities=19% Similarity=0.135 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2elz_A 11 KPYKCEDCGKGYNRRL 26 (46)
T ss_dssp SSCBCSSSCCBCSSHH
T ss_pred CCeeCcccCchhCCHH
Confidence 4589999999997643
No 270
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.54 E-value=39 Score=20.65 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=13.0
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yu8_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSEECSSSCCEESSSH
T ss_pred CCeECCcCCchhCCHH
Confidence 4589999999998654
No 271
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=22.53 E-value=34 Score=21.01 Aligned_cols=16 Identities=13% Similarity=0.268 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emk_A 11 KPYECKECGKAFSQTT 26 (46)
T ss_dssp CSCBCSSSCCBCSCHH
T ss_pred CceECCCCCchhCCHH
Confidence 4589999999997643
No 272
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.52 E-value=36 Score=20.84 Aligned_cols=16 Identities=13% Similarity=0.204 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2emp_A 11 KPYMCNECGKAFSVYS 26 (46)
T ss_dssp CSEECSSSCCEESCHH
T ss_pred cCeECCCCCchhCCHH
Confidence 4589999999987643
No 273
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=22.46 E-value=35 Score=20.95 Aligned_cols=15 Identities=7% Similarity=0.100 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2el6_A 11 NPYKCSQCEKSFSGK 25 (46)
T ss_dssp CSEECSSSSCEESSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999998754
No 274
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.44 E-value=95 Score=19.77 Aligned_cols=33 Identities=15% Similarity=0.009 Sum_probs=20.9
Q ss_pred cCCccchHHH-HHHHHH-h--CCCceecCCCCcccCc
Q 018698 310 PNGYVYSTKA-LEEMAK-K--NNGKITCPRTGLVCNY 342 (351)
Q Consensus 310 p~GhV~s~~a-l~~l~~-~--~~~~~~CP~~~~~~~~ 342 (351)
-||..+.... |.+-.+ . +...++|+.|++.|..
T Consensus 17 ~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 17 SCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp SSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred CCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence 4787776554 433222 1 2345899999999864
No 275
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=22.40 E-value=35 Score=20.89 Aligned_cols=15 Identities=20% Similarity=0.414 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ema_A 11 KRYKCNECGKVFSRN 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred cCcCCCCCcchhCCH
Confidence 458999999998764
No 276
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=22.39 E-value=35 Score=20.93 Aligned_cols=16 Identities=6% Similarity=0.225 Sum_probs=12.7
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2em0_A 11 KTWKCRECDMCFSQAS 26 (46)
T ss_dssp CCCCCSSSCCCCSSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 4589999999997643
No 277
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=22.32 E-value=3.5e+02 Score=22.71 Aligned_cols=87 Identities=10% Similarity=0.069 Sum_probs=46.6
Q ss_pred HHHhHHHHhhhhHHHH----HHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHH--
Q 018698 53 EHYKKTIRTNHRAVEK----EITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKDLVDIEVFQEAKKVIDAL-- 126 (351)
Q Consensus 53 E~l~k~fr~~qk~iek----e~~~v~~~~~~~~k~~~~~~~~~~~~l~~~i~rl~~lkrk~lvd~d~f~~~~~I~~~L-- 126 (351)
+.+.+.|+..++.+.. .+..|...-.+|...+......+...++.+-.+=+.|... .-.....+..++
T Consensus 37 ~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~------~~~R~~~L~~a~~~ 110 (218)
T 3edu_A 37 TLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLEL------IDTRMQLLAASYDL 110 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH
Confidence 5678888877776653 2334444444444444455555666666665553333211 001111222222
Q ss_pred h--cCChHHHHHHHHhhhhHh
Q 018698 127 Q--NKEVAPALAWCSDNKSRL 145 (351)
Q Consensus 127 ~--~~dl~~AL~W~~enk~~L 145 (351)
. .+++++++.|+.+....|
T Consensus 111 ~~F~~~~~e~~~Wl~ek~~~l 131 (218)
T 3edu_A 111 HRYFYTGAEILGLIDEKHREL 131 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhhC
Confidence 1 358899999999876665
No 278
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=22.29 E-value=31 Score=25.15 Aligned_cols=15 Identities=20% Similarity=0.543 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..+.||+|++.+.+.
T Consensus 8 ~~~~CP~Cgkp~~W~ 22 (68)
T 1lv3_A 8 ITVNCPTCGKTVVWG 22 (68)
T ss_dssp CEEECTTTCCEEECS
T ss_pred CcCcCCCCCCccccc
Confidence 468999999998753
No 279
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=22.28 E-value=82 Score=22.28 Aligned_cols=24 Identities=33% Similarity=0.537 Sum_probs=18.8
Q ss_pred HHHHHHHh---cCChHHHHHHHHhhhh
Q 018698 120 KKVIDALQ---NKEVAPALAWCSDNKS 143 (351)
Q Consensus 120 ~~I~~~L~---~~dl~~AL~W~~enk~ 143 (351)
.+.+.+|+ +.+++.|++|+-+|..
T Consensus 24 ~~a~~AL~~t~n~~~e~A~~wL~~h~~ 50 (64)
T 2crn_A 24 HTALKALAATGRKTAEEALAWLHDHCN 50 (64)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence 56777776 2389999999998864
No 280
>3hrn_A Transient receptor potential (Trp) channel subfamily P member 2 (TRPP2); coiled coil, helix bundle, trimer, calcium, disease mutation, glycoprotein; 1.90A {Homo sapiens} PDB: 3hro_A
Probab=22.27 E-value=91 Score=22.31 Aligned_cols=36 Identities=17% Similarity=0.351 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHhhhhcCC
Q 018698 71 TSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKDL 110 (351)
Q Consensus 71 ~~v~~~~~~~~k~~~~~~~~~~~~l~~~i~rl~~lkrk~l 110 (351)
..+...+.+++ .+...++..||.+..||..+.|+++
T Consensus 9 ~~L~rRVlqLE----~sl~gI~SqIDaV~~KL~~~Er~k~ 44 (64)
T 3hrn_A 9 QVLVRRVDRME----HSIGSIVSKIDAVIVKLEIMERAKL 44 (64)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33444444443 3355677888888898888887754
No 281
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.26 E-value=38 Score=20.71 Aligned_cols=15 Identities=13% Similarity=0.151 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2yso_A 11 KSHQCRECGEIFFQY 25 (46)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCEEccccChhhCCH
Confidence 458999999999754
No 282
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=22.15 E-value=56 Score=23.19 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=20.1
Q ss_pred CCccchHHH-HHHHHH--hCCCceecCCCCcccCcC
Q 018698 311 NGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 311 ~GhV~s~~a-l~~l~~--~~~~~~~CP~~~~~~~~~ 343 (351)
||..+.... |..=.+ .+...++|+.|++.|...
T Consensus 9 C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~ 44 (88)
T 1llm_C 9 CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARS 44 (88)
T ss_dssp TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSH
T ss_pred CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCH
Confidence 777775443 332211 234568999999988754
No 283
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.87 E-value=37 Score=20.73 Aligned_cols=15 Identities=13% Similarity=0.231 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq4_A 11 KLYNCKECGKSFSRA 25 (46)
T ss_dssp CCCCBTTTTBCCSCH
T ss_pred CCeECCCCCCccCch
Confidence 458999999999764
No 284
>2caz_B Vacuolar protein sorting-associated protein VPS28; protein transport, ESCRT, MVB, multivesicular bodies, endosome, lysosome, PH domain, protein sorting; 3.6A {Saccharomyces cerevisiae} SCOP: a.2.17.2
Probab=21.81 E-value=1.3e+02 Score=25.28 Aligned_cols=52 Identities=19% Similarity=0.344 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhcc---CCCChHHHHHHHHHHHHHHHhhhh--------cCCCCHHHHHHHH
Q 018698 69 EITSVISNVADVSDS---ENFSKDDAVNHLTSLVSRLQGLKR--------KDLVDIEVFQEAK 120 (351)
Q Consensus 69 e~~~v~~~~~~~~k~---~~~~~~~~~~~l~~~i~rl~~lkr--------k~lvd~d~f~~~~ 120 (351)
|+-.|+.++..|+|. ..++.++......++|.+-+.+.+ +++.|++.|.+.+
T Consensus 50 eLYSII~tLE~LEKAYikD~It~~eYT~aC~rLL~QYKt~~~~~~~~~v~~~~~dle~F~~~Y 112 (155)
T 2caz_B 50 EIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEAFCDTY 112 (155)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHTSSSCHHHHHHTCSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcchhHHHHHHCCCHHHHHHHh
Confidence 445677777788873 457888898999999987665544 2344555555433
No 285
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.75 E-value=32 Score=21.07 Aligned_cols=15 Identities=20% Similarity=0.304 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ysp_A 11 KPYKCEKCGKGYNSK 25 (46)
T ss_dssp CSEEETTTTEEESCH
T ss_pred CCeECCCCCCccCCH
Confidence 458999999998764
No 286
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.64 E-value=39 Score=20.70 Aligned_cols=15 Identities=13% Similarity=0.186 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2enc_A 11 KPFKCEECGKGFYTN 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCcCCCCCCCcCCCh
Confidence 458999999998754
No 287
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.61 E-value=38 Score=20.76 Aligned_cols=15 Identities=13% Similarity=0.251 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytq_A 11 KPYGCSECGKAFSSK 25 (46)
T ss_dssp CSCBCSSSCCBCSCH
T ss_pred CCcCCCccChhhCCh
Confidence 458999999999754
No 288
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.57 E-value=34 Score=20.93 Aligned_cols=16 Identities=13% Similarity=0.277 Sum_probs=12.7
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytr_A 11 KPYKCNECGKAFSQTS 26 (46)
T ss_dssp CTTCCTTTCCCCSSHH
T ss_pred cCcCCCCCCCccCCHH
Confidence 4589999999997643
No 289
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.44 E-value=38 Score=20.54 Aligned_cols=15 Identities=13% Similarity=0.217 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 018698 329 GKITCPRTGLVCNYS 343 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~ 343 (351)
..++|+.|++.|...
T Consensus 9 k~~~C~~C~k~f~~~ 23 (43)
T 2yrm_A 9 GAFFCNECDCRFSEE 23 (43)
T ss_dssp CCBCCSSSCCCBSSH
T ss_pred CCEECCCCCCeeCCh
Confidence 458999999999754
No 290
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.31 E-value=34 Score=20.95 Aligned_cols=16 Identities=13% Similarity=0.256 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2en1_A 11 KPFKCEECGKRFTQNS 26 (46)
T ss_dssp CSEEETTTTEEESSHH
T ss_pred CCeeCCCCCcccCCHH
Confidence 4589999999987643
No 291
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=21.13 E-value=61 Score=22.20 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=20.9
Q ss_pred cCCccchHH-HHHHHHH--hCCCceecCCCCcccCcC
Q 018698 310 PNGYVYSTK-ALEEMAK--KNNGKITCPRTGLVCNYS 343 (351)
Q Consensus 310 p~GhV~s~~-al~~l~~--~~~~~~~CP~~~~~~~~~ 343 (351)
-||..+... .|.+=.+ .+...++|+.|++.|...
T Consensus 34 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 70 (82)
T 2kmk_A 34 YCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS 70 (82)
T ss_dssp SSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSH
T ss_pred cCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCCh
Confidence 377776443 3333211 244569999999998754
No 292
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=20.97 E-value=54 Score=27.59 Aligned_cols=60 Identities=10% Similarity=0.058 Sum_probs=38.0
Q ss_pred CCCCCCCchhhhcccCCC-CCCCCCC-CeeeeeccccccCCCCCceeccCCccchHHHHHHH
Q 018698 264 TKEDPLSQESFRKLASPL-PYSKQHH-SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEM 323 (351)
Q Consensus 264 ~~~cP~c~~~~~~l~~~L-P~~~~~h-S~~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l 323 (351)
...|..|...+.+-..-+ .....+| .-|.|..-+..+...+.-+...+|++|++....++
T Consensus 119 ~~kC~~C~~~I~~~~~v~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~yC~~cy~~~ 180 (182)
T 2jtn_A 119 GTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETA 180 (182)
T ss_dssp SCCCTTTCCCCCSSCCCCEETTEECCTTTCCCTTTCCCCCTTCEEEECTTSCEECHHHHHHH
T ss_pred ccccccCCCccCCCceEEecCCCCEEeCCCcCCCCCCCCCCCCceEEccCCEEECHHHHHHh
Confidence 346777766543321111 1223444 34899998888876555566789999999888765
No 293
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.94 E-value=34 Score=20.98 Aligned_cols=16 Identities=13% Similarity=0.220 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2en6_A 11 KPYGCNECGKTFSQKS 26 (46)
T ss_dssp CCEEETTTTEEESSHH
T ss_pred cCeECCCCCcccCchH
Confidence 4589999999987643
No 294
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.79 E-value=41 Score=20.58 Aligned_cols=16 Identities=13% Similarity=0.212 Sum_probs=12.8
Q ss_pred CCceecCCCCcccCcC
Q 018698 328 NGKITCPRTGLVCNYS 343 (351)
Q Consensus 328 ~~~~~CP~~~~~~~~~ 343 (351)
...++|+.|++.|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYG 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCcccCcccCCh
Confidence 3468999999999764
No 295
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.61 E-value=37 Score=20.89 Aligned_cols=16 Identities=13% Similarity=0.200 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytm_A 11 KPYKCMECGKAFGDNS 26 (46)
T ss_dssp CSSSBTTTTBCCSSHH
T ss_pred CCcCCCCCCchhCCHH
Confidence 4589999999997643
No 296
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=20.58 E-value=1.7e+02 Score=27.13 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=36.4
Q ss_pred cCChHHHHHHHHhhhhHhhhCCCcchhhchhHHHHHHHhcCChHHHHHHHHHh
Q 018698 128 NKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKY 180 (351)
Q Consensus 128 ~~dl~~AL~W~~enk~~L~k~~S~LEF~Lr~q~fIeLir~~~~~eAI~yark~ 180 (351)
.|+++.||+|+.+. |....+.-..+++....--+++.|+...|.+..++.
T Consensus 113 ~g~~eeAL~~l~~~---i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 113 LGDLDKSLETCVEG---IDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp HTCHHHHHHHHHHH---HTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH---hccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 69999999999876 222221345666666666677889999999998753
No 297
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.56 E-value=42 Score=20.52 Aligned_cols=16 Identities=13% Similarity=0.262 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytd_A 11 KPYKCSECGKAFHRHT 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCCCCCeeCChH
Confidence 4589999999987643
No 298
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=20.55 E-value=2.9e+02 Score=27.78 Aligned_cols=25 Identities=20% Similarity=0.502 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHHHHHHHHhcCChHH
Q 018698 109 DLVDIEVFQEAKKVIDALQNKEVAP 133 (351)
Q Consensus 109 ~lvd~d~f~~~~~I~~~L~~~dl~~ 133 (351)
--||++.|++.++-++.+..-|+.|
T Consensus 171 ~~vd~~sY~~~QKQLeQv~a~dL~p 195 (562)
T 3ghg_A 171 REVDLKDYEDQQKQLEQVIAKDLLP 195 (562)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred eecchHHHHHHHHHHHHHhhcccCC
Confidence 4467777777777777776666544
No 299
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=20.53 E-value=88 Score=19.22 Aligned_cols=18 Identities=22% Similarity=0.339 Sum_probs=13.3
Q ss_pred HHHHHHh--cCChHHHHHHH
Q 018698 121 KVIDALQ--NKEVAPALAWC 138 (351)
Q Consensus 121 ~I~~~L~--~~dl~~AL~W~ 138 (351)
+.+.+|+ +||++.|++|+
T Consensus 20 ~a~~AL~~~~~n~e~A~~~L 39 (40)
T 1z96_A 20 EAAQALDAANGDLDVAASFL 39 (40)
T ss_dssp HHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHH
Confidence 4455555 68999999996
No 300
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.52 E-value=65 Score=22.30 Aligned_cols=58 Identities=14% Similarity=0.127 Sum_probs=38.3
Q ss_pred CCCCCCchhhhcccCCC-CCCCCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHH
Q 018698 265 KEDPLSQESFRKLASPL-PYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 324 (351)
Q Consensus 265 ~~cP~c~~~~~~l~~~L-P~~~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~ 324 (351)
..|+.|...+.+-..-+ .....+|.. |.|..-+..++.. ++...+|.+|++....++.
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~--~~~~~~~~~yC~~cy~~~f 65 (72)
T 1wyh_A 6 SGCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSR--SFVPDKGAHYCVPCYENKF 65 (72)
T ss_dssp CBCSSSCCBCCSSSCEECSTTCCEETTTCBCTTTCCBTTTS--CEEEETTEEEEHHHHHHHT
T ss_pred CCCccCCCccccCccEEEECccccCcccCeECCCCCcCCCC--ccCCcCCeEECHHHHHHHc
Confidence 45777776654321111 122455554 8999888888764 5788899999998887663
No 301
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.40 E-value=34 Score=20.89 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 018698 329 GKITCPRTGLVCNYSD 344 (351)
Q Consensus 329 ~~~~CP~~~~~~~~~~ 344 (351)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (46)
T 2eoe_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSSEETTTTEECSSHH
T ss_pred CCeECCCcChhhCCHH
Confidence 4589999999997643
No 302
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.20 E-value=63 Score=22.94 Aligned_cols=62 Identities=10% Similarity=0.030 Sum_probs=40.3
Q ss_pred ccCCCCCCCCCCchhhhcccCCC-CCCCCCCCe-eeeeccccccCCCCCceeccCCccchHHHHHHHH
Q 018698 259 YEDDCTKEDPLSQESFRKLASPL-PYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 324 (351)
Q Consensus 259 ~~~~~~~~cP~c~~~~~~l~~~L-P~~~~~hS~-~vCpis~e~~~e~NpP~~Lp~GhV~s~~al~~l~ 324 (351)
|.......|+.|...+.. ..| .....+|.. |.|..-+..++.. .+...+|.+|++....++.
T Consensus 10 y~~~~~~~C~~C~~~I~~--~~v~a~~~~~H~~CF~C~~C~~~L~~~--~~~~~~~~~yC~~~y~~~f 73 (80)
T 1x3h_A 10 FLAMFSPKCGGCNRPVLE--NYLSAMDTVWHPECFVCGDCFTSFSTG--SFFELDGRPFCELHYHHRR 73 (80)
T ss_dssp CCCCCSCBCTTTCCBCCS--SCEEETTEEECTTTCBCSSSCCBSCSS--CCEESSSCEECHHHHHHHH
T ss_pred HhhhcCCccccCCCeecc--eeEEECCCeEecCcCChhhCCCCCCCC--cEEeECCEEECHHHHHHHc
Confidence 333334568888776543 111 112345544 8999999888764 4677899999998887764
Done!